BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001721
         (1020 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
            vinifera]
          Length = 1107

 Score = 1544 bits (3997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 784/1029 (76%), Positives = 880/1029 (85%), Gaps = 17/1029 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRS-HYRKGRAESR 63
            PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWF+GLKALISR  H+RK R ESR
Sbjct: 83   PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRGGHHRKWRTESR 142

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
            SD + S A SPR +T+RSSPL+SPFGS  S QKDG D L LH+ YESPPK+V++KA SD 
Sbjct: 143  SDGIPSEANSPRTYTRRSSPLNSPFGSADSLQKDGGDHLRLHSPYESPPKSVMEKAFSDV 202

Query: 124  VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGH 183
            +LYA PPK   PS+SA GSV+SLSSGGSD   GH+K ++ D FRVSLSSAVSSSSQGSGH
Sbjct: 203  ILYAVPPKGFFPSDSASGSVHSLSSGGSDSVHGHMKAMTMDAFRVSLSSAVSSSSQGSGH 262

Query: 184  DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
            DDGD+LGDVFIWGE TGDG+LGGG HR GS  G+KMDS +PKA+ESAVVLDVQNIACGGR
Sbjct: 263  DDGDALGDVFIWGEGTGDGVLGGGSHRVGSCFGMKMDSLLPKALESAVVLDVQNIACGGR 322

Query: 244  HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            HAALVTKQGE+FSWGEE GGRLGHGVDSDV HPKLID+L N N+ELVACGE+HTCAVTLS
Sbjct: 323  HAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHTCAVTLS 382

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            GD+YTWG    NFGLLGHGNE+S W+PK++NGPLEGIHVSS+SCGPWHTAVVTS+GQLFT
Sbjct: 383  GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFT 442

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            FGDGTFGVLGHGD  SVS PREV+SLKG RTV +ACGVWHTAAVVE+MVG+ SSSNCSSG
Sbjct: 443  FGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSG 502

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            KLFTWGDGD+GRLGHGDKEA+LVPTCVAALV+PNFC+V+CGHSLTVALTT+GHVYTMGSP
Sbjct: 503  KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSP 562

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            VYGQLG+P+A+GKLPTRVEGKL K+FVEEIACG YHVAVLTSRTEVYTWGKGANGRLGHG
Sbjct: 563  VYGQLGNPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHG 622

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            DTDDRN P+LVEALKDKQVKSI CGT+FTA ICLHKWVSGVDQSMCSGCR+PFNFKRKRH
Sbjct: 623  DTDDRNSPTLVEALKDKQVKSIACGTNFTATICLHKWVSGVDQSMCSGCRLPFNFKRKRH 682

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCYNCGLV+CH+CSSKKS+KASMAPNPNKPYRVCDNCF KL KA ET +SS S VSRRG 
Sbjct: 683  NCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFSKLRKAIETDASSQSAVSRRGV 742

Query: 664  MNQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGV 721
             NQG NE ++  E   SRS VQ    +SMESLK+ ES +SKRNKK EFN +R  P+PNG 
Sbjct: 743  TNQGLNELIDKDEKLDSRSRVQLARFSSMESLKQAESRTSKRNKKLEFNSSRVSPIPNGG 802

Query: 722  SQ-GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGL 780
            SQ G AL   KS NPVFGS+KKFFSAS+PGSRI+SR TSP SRR SPPRA TPTPTL GL
Sbjct: 803  SQWGGAL---KSLNPVFGSSKKFFSASVPGSRIVSRTTSPISRRPSPPRAATPTPTLEGL 859

Query: 781  ASPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEET 836
             SPKIVVDDAKRT    S+EVIKLR QVE LTRK+QLQE+ELERTT+QLKEA+A+AGEET
Sbjct: 860  TSPKIVVDDAKRTNDSLSQEVIKLRVQVENLTRKAQLQEVELERTTKQLKEAIAIAGEET 919

Query: 837  AKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN-----SFHSSPTPAWDVSSAAIEQPSS 891
            A+C+AAK+VIKSLTAQLKDMAE LPVGA RN+      S  S+P  + D+SS +I++ + 
Sbjct: 920  ARCKAAKEVIKSLTAQLKDMAERLPVGAARNTKSPSFTSLGSNPASS-DLSSLSIDRING 978

Query: 892  PLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVE 951
             +T Q    NGSN  +LSNGS   +NRS       H EAT +N +RT ++E    +EWVE
Sbjct: 979  QITSQEPDLNGSNGQLLSNGSSTTNNRSSGHNRLGHLEATIRNGSRTKESEHRNDNEWVE 1038

Query: 952  QDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSV 1011
            QDE GVYITL +LPGG+KDLKRVRFSRK+FSEKQAEQWWA NRARV+++YNV M+DKSSV
Sbjct: 1039 QDEPGVYITLTSLPGGVKDLKRVRFSRKRFSEKQAEQWWAENRARVHERYNVRMIDKSSV 1098

Query: 1012 SIGREGLAH 1020
             +G E LAH
Sbjct: 1099 GVGSEDLAH 1107


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score = 1528 bits (3955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 787/1025 (76%), Positives = 873/1025 (85%), Gaps = 15/1025 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIY+DRSLDLICKDKDEAEVW TGLKALISR+H RKGR ESRS
Sbjct: 78   PIFQRYPRPEKEYQSFSLIYDDRSLDLICKDKDEAEVWITGLKALISRNHMRKGRGESRS 137

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D +SS ATSPRAHTQRSSPLSS FGSG SSQKD +DPL L T Y SPPK  L+K LSD  
Sbjct: 138  DGISSEATSPRAHTQRSSPLSSAFGSGDSSQKDEIDPLRLRTPYGSPPKAGLEKVLSDME 197

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LYA  PKVL P ESACGSV+S+SS GSD   G LKG++ D FRVSLSSAVSSSSQGSGHD
Sbjct: 198  LYAVAPKVLCPPESACGSVHSVSSAGSDAINGRLKGMTVDAFRVSLSSAVSSSSQGSGHD 257

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            D D+LGDV+IWGE    G + GG       +GV+ DSFVPKA+ESAV+LDVQ IACG RH
Sbjct: 258  DSDALGDVYIWGE-GTAGGILGGGMNGVGGSGVRTDSFVPKALESAVLLDVQTIACGRRH 316

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AALVTKQGEVFSWGEELGGRLGHGVDSDV HPKL+D LKN NVELVACGE+H+CAVTLSG
Sbjct: 317  AALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHSCAVTLSG 376

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWGGS+ N GLLG+ NE S W+PKKLNGPLEGIHV++VSCGPWHTAVVTS+GQLFTF
Sbjct: 377  DLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVTSSGQLFTF 436

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGDR SVSTPREV+SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK
Sbjct: 437  GDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 496

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGHGDKE+RLVPTCVAALVEPNFCQV+CGHS+TVALTTTGHVYTMGSPV
Sbjct: 497  LFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGSPV 556

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P+A+GKLP RVEGKL+KNFVEE+ CG YHVAVLTSRTEVYTWGKGANGRLGHGD
Sbjct: 557  YGQLGNPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 616

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
            TDDR+ P++VEALKDKQVKS+VCGTSFTAAICLHKWVSG+DQSMCSGCR+PFNFKRKRHN
Sbjct: 617  TDDRSSPTIVEALKDKQVKSVVCGTSFTAAICLHKWVSGIDQSMCSGCRLPFNFKRKRHN 676

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+CS+KKS+KASMAPNPNKPYRVCD CFGKL +ATE  SS HS +SRRGS+
Sbjct: 677  CYNCGLVFCHSCSNKKSLKASMAPNPNKPYRVCDQCFGKLRRATEIDSSYHSALSRRGSI 736

Query: 665  NQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQ   EA E+ E   +RS +Q G   S+E  K VES S KRNKK   N ++     N  S
Sbjct: 737  NQRLIEA-ENSEYPNTRSRIQLGRNNSIEMSKDVESESLKRNKKLSLNGSQVSLSANDSS 795

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
            Q NA N SKS    FGS+KKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTP LS  A 
Sbjct: 796  QRNAFNTSKS----FGSSKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPILSVRAL 851

Query: 783  PKIVVDDAKR----TSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            P+IVVDD K+     SEEV+KLR+QVEELTRK+QLQ++ELERTT+QLKEA+AVA EETAK
Sbjct: 852  PRIVVDDTKKLNDGLSEEVVKLRSQVEELTRKAQLQDVELERTTKQLKEAIAVADEETAK 911

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRN---SNSFHSSPTPAWDVSSAAIEQPSSPLTF 895
            C+AAK+VIKSLTAQLK++AE LPV   RN    + + SS TP  +VSSA  E  SSP T+
Sbjct: 912  CKAAKEVIKSLTAQLKELAERLPVVPTRNSSSPSFYFSSATPPREVSSAVNEHLSSPTTY 971

Query: 896  QGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDET 955
                 NGS++L++SN S     ++ +  EA+H EATT+++NRT K EPA GDEWVEQDE 
Sbjct: 972  HEPDSNGSSNLVISNVSSTASYQTLNHPEAAHLEATTRSRNRTAKVEPAHGDEWVEQDEP 1031

Query: 956  GVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIGR 1015
            GVYITLV+LPGG KDLKRVRFSRK+FSEKQAEQWWAANRARVYQQYNV MVDKS V IGR
Sbjct: 1032 GVYITLVSLPGGAKDLKRVRFSRKRFSEKQAEQWWAANRARVYQQYNVPMVDKSIVGIGR 1091

Query: 1016 EGLAH 1020
            EGLAH
Sbjct: 1092 EGLAH 1096


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score = 1507 bits (3901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 787/1026 (76%), Positives = 882/1026 (85%), Gaps = 12/1026 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIYN+RSLDLICKDKDEAEVWF+GLKALI+RSH RK R ESRS
Sbjct: 77   PIFQRYPRPEKEYQSFSLIYNERSLDLICKDKDEAEVWFSGLKALITRSHQRKWRTESRS 136

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D + S A SPR +T+RSSPL+SPFGS  S QKDG D L LH+ YESPPKN LDKA SD +
Sbjct: 137  DGIPSEANSPRTYTRRSSPLNSPFGSNDSLQKDG-DQLRLHSPYESPPKNGLDKAFSDVI 195

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LYA PPK   PS+SA  SV+SLSSGGSD   GH+K ++ D FRVSLSSAVSSSSQGSGHD
Sbjct: 196  LYAVPPKGFFPSDSASASVHSLSSGGSDSVRGHMKAMAMDAFRVSLSSAVSSSSQGSGHD 255

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            D D+LGDVFIWGE TGDG+LGGG HR+GS  GVK+DS +PKA+ES VVLDVQNIACGGRH
Sbjct: 256  DSDALGDVFIWGEGTGDGVLGGGAHRAGSGFGVKLDSLLPKALESTVVLDVQNIACGGRH 315

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AALVTKQGEVFSWGEE GGRLGHGVDSDV HPKLID+L NIN+ELVACGE+HTCAVTLSG
Sbjct: 316  AALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTLSG 375

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG    NFGLLGHGNE+S W+PK++NGPLEGIHVSS+SCGPWHTAVVTS+GQLFTF
Sbjct: 376  DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTF 435

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGDR SVS PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGK
Sbjct: 436  GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 495

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGHGDKEA+LVPTCVAALVEPNFCQV+CGHSLTVALTT+GHVYTMGSPV
Sbjct: 496  LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPV 555

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P+A+GKLP RVEG+L+K+FVEEIACG YHVAVLTS+TEVYTWGKGANGRLGHGD
Sbjct: 556  YGQLGNPQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGD 615

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
            TDDRNFPSLVEALKDKQVKSI CGT+FTAAICLHKWVSG+DQSMCSGCR+PFNFKRKRHN
Sbjct: 616  TDDRNFPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGIDQSMCSGCRLPFNFKRKRHN 675

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+CSSKKS+KASMAPNPNKP+RVCDNC+ KL KA ET +SS S+VSRRGS+
Sbjct: 676  CYNCGLVFCHSCSSKKSLKASMAPNPNKPFRVCDNCYSKLRKAIETDASSQSSVSRRGSV 735

Query: 665  NQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            N G NE ++  E   SRS  Q    +SMESLK+ E+  SKRNKK EFN +R  P+PNG S
Sbjct: 736  NHGSNEFIDKDEKLDSRSRAQLARFSSMESLKQAEN-RSKRNKKLEFNSSRVSPVPNGGS 794

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
            Q  ALN SKS NP+FGS+KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTL GL S
Sbjct: 795  QWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTS 854

Query: 783  PKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            PK+VV+DAKRT+E    EV KLRAQVE LTRK+Q+QE+ELER  +QLKEA+A+AGEETAK
Sbjct: 855  PKLVVNDAKRTNESLSQEVNKLRAQVESLTRKAQVQEVELERAAKQLKEAIAIAGEETAK 914

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRN--SNSFHS-SPTPAW-DVSSAAIEQPSSPLT 894
            C+AAK+VIKSLTAQLKDMAE LPVGA RN  S SF S  PTPA  D+SSAA ++ +  + 
Sbjct: 915  CKAAKEVIKSLTAQLKDMAERLPVGAARNIKSPSFTSFGPTPASNDISSAAADRLNGQIA 974

Query: 895  FQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDE 954
             Q    NG NS +LSNGS     R+    +  H EAT +N +RT + E     EWVEQDE
Sbjct: 975  SQEPDTNGLNSQLLSNGSTTTSMRNSGHNKQGHVEATVRNGSRTKETETHHEAEWVEQDE 1034

Query: 955  TGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIG 1014
             GVYITL +LPGG+KDLKRVRFSRK+FSEKQAEQWWA NRARVY+QYNV  +DKSSV +G
Sbjct: 1035 PGVYITLTSLPGGVKDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNVRTIDKSSVGVG 1094

Query: 1015 REGLAH 1020
             E LA+
Sbjct: 1095 SEDLAN 1100


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score = 1502 bits (3888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 786/1027 (76%), Positives = 875/1027 (85%), Gaps = 16/1027 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWF+GLKALISRSH++K R ESRS
Sbjct: 83   PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHQKWRTESRS 142

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D + S A SPR +T+RSSPL+SPFGS   SQKD  D   LH+ YESPPKN LDKA SD V
Sbjct: 143  DGIPSEANSPRTYTRRSSPLNSPFGSNDGSQKDA-DHHRLHSPYESPPKNGLDKAFSDVV 201

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LYA PPK   PS+SA GSV+SLSSGGSD   GH+K ++ D FRVSLSSAVSS SQGSGHD
Sbjct: 202  LYAVPPKGFFPSDSASGSVHSLSSGGSDSVHGHMKAMAVDAFRVSLSSAVSSLSQGSGHD 261

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DG +LGDVFIWGE  GDG+LGGG HR+GSY GVKMDS  PKA+ESAVVLDVQNIACGG+H
Sbjct: 262  DGGALGDVFIWGEGMGDGVLGGGTHRAGSYFGVKMDSLFPKALESAVVLDVQNIACGGQH 321

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AALVTKQGE+FSWGEE GGRLGHGVDSDV HPKLIDAL N N+ELVACGE+HTCAVTLSG
Sbjct: 322  AALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHTCAVTLSG 381

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG    NFGLLGHGNE+S W+PK++NGPLEGIHVSS+SCGPWHTAVVTSAGQLFTF
Sbjct: 382  DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 441

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGDR S+S P+EV+SLKGLRTV+AACGVWHTAAV+EVMVG+SSSSNCSSGK
Sbjct: 442  GDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGK 501

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGHGDKEA+LVPTCVAALVEPNFCQV+CGHSLTVA TT+GHVYTMGSPV
Sbjct: 502  LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPV 561

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P A+GKLPTRVEGKL+K+FVEEIACG YHVAVLTS+TEVYTWGKGANGRLGHGD
Sbjct: 562  YGQLGNPLADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGD 621

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
            TDDRN PSLVEALKDKQVKSI CGTSFTAAICLHKWVSGVDQSMCSGCR+PFNFKRKRHN
Sbjct: 622  TDDRNSPSLVEALKDKQVKSIACGTSFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHN 681

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLVYCH+CSSKKS+KASMAPNPNK YRVCDNC+ KL KA ET +SS S+VSRRGS+
Sbjct: 682  CYNCGLVYCHSCSSKKSLKASMAPNPNKAYRVCDNCYNKLRKAIETDASSQSSVSRRGSV 741

Query: 665  NQGFNEAVEHGE--NFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG  E ++  E  +F SR+ +   +SMESLK+ ES  SKRNKK EFN +R  P+PNG S
Sbjct: 742  NQGPREFIDEDEKLDFRSRAQLARFSSMESLKQAES-RSKRNKKLEFNSSRVSPVPNGGS 800

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
            Q  ALN SKS NP+FGS+KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTL GL S
Sbjct: 801  QWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTS 860

Query: 783  PKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            PKIVVDDAKR  E    EVIKLRAQ+E LTRK+QLQE+ELERTT QLKEA+A+AGEETAK
Sbjct: 861  PKIVVDDAKRNYESLNQEVIKLRAQMESLTRKAQLQEVELERTTMQLKEAIAIAGEETAK 920

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN-----SFHSSPTPAWDVSSAAIEQPSSPL 893
            C+AAK+VIKSLTAQLKDMAE LPVG  R+       SF SSPT   DVS+  I++ +  +
Sbjct: 921  CKAAKEVIKSLTAQLKDMAERLPVGMGRSIKSPLFTSFGSSPTSN-DVST--IDRLNGQI 977

Query: 894  TFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQD 953
            T +    NG ++ +L NGS    NR     +  H EATTKN +RT + E     EWVEQD
Sbjct: 978  TCEEPDTNGLHNQLLLNGSSITSNRIAGHNKQGHLEATTKNGSRTKEGESRHEAEWVEQD 1037

Query: 954  ETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSI 1013
            E GVYITL + PGG+KDLKRVRFSRK+FSEKQAEQWWA NRARVY+QYNV M+DKSSV +
Sbjct: 1038 EPGVYITLTSQPGGIKDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNVRMIDKSSVGV 1097

Query: 1014 GREGLAH 1020
            G E L H
Sbjct: 1098 GSEDLTH 1104


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score = 1478 bits (3827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 764/1027 (74%), Positives = 853/1027 (83%), Gaps = 17/1027 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIY+DRSLDLICKDK+EAEVWFTGLKALIS     K R E+ +
Sbjct: 79   PIFQRYPRPEKEYQSFSLIYSDRSLDLICKDKEEAEVWFTGLKALISNRQIWKKREETTN 138

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D + S A SPRA+T RSSPLS  FGS  SS KDG+DPL L T Y+SPP   L+KALSD V
Sbjct: 139  DGLLSEANSPRAYTIRSSPLSFAFGSDDSSLKDGMDPLRLRTPYDSPPNTGLEKALSD-V 197

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            +Y  PPKVL P ESAC    S   GGSD  TG  K  + D FRVSLSSAVSSSSQGSG D
Sbjct: 198  VYTVPPKVLFPLESACAPAQSQLLGGSDETTGRAKVTNTDNFRVSLSSAVSSSSQGSGRD 257

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            + D+LGDV+IWGE TGDGILGGG+HR G  +GV+MDSFVPKA+ESAV+LDVQ IACG +H
Sbjct: 258  ENDALGDVYIWGEGTGDGILGGGVHRIGG-SGVQMDSFVPKALESAVLLDVQAIACGRQH 316

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK +D LKN NVELVACGE+H+CAVTLSG
Sbjct: 317  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVTLSG 376

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+Y WGG+  NFGLLG G+E + W+P+KL+GPLEGIHVSSVSCGPWHTAVVTSAGQLFTF
Sbjct: 377  DLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGDRISVS PREV+SLKGLRT+RAACGVWHTAAVVE+MVGSS+SSNCSSGK
Sbjct: 437  GDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGK 496

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+ RLGHGDKEARLVPTCVA LVEPNFCQV+CGHSLT ALTTTG VYTMGSPV
Sbjct: 497  LFTWGDGDKCRLGHGDKEARLVPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSPV 556

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P+A+G LPTRVEGKL KNFVEE+ACG YHVAVLTSRTEVYTWGKGANGRLGHGD
Sbjct: 557  YGQLGNPQADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGD 616

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
             DDRN PS+VEALKDKQVK IVCGTSFTAAICLHKWVSG+DQSMCSGC +PFNFKRKRHN
Sbjct: 617  ADDRNSPSVVEALKDKQVKGIVCGTSFTAAICLHKWVSGIDQSMCSGCHLPFNFKRKRHN 676

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+CS+KKS+KASMAPNPNKPYRVCDNC  KL +++ET SS HS +SRRGS+
Sbjct: 677  CYNCGLVFCHSCSNKKSLKASMAPNPNKPYRVCDNCLSKLRRSSETDSSVHSALSRRGSV 736

Query: 665  NQGFNEAVEHGENFVSRSHVQFGT--SMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG NE  E  EN  S+SH + G   SMES K+VES SS+RN+K   N  +  P  N VS
Sbjct: 737  NQGLNEVAEKTENSNSKSHAKLGRNFSMESSKEVESISSRRNRKSNSNSIQVSPSGNDVS 796

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
            + N  NNSKS    FGS+KKFFSASLPGSRI+SRATSPTSRRSSPPRA TPTPTLS    
Sbjct: 797  RRNTFNNSKS----FGSSKKFFSASLPGSRIVSRATSPTSRRSSPPRAATPTPTLSANEL 852

Query: 783  PKIVVDDAKRTS----EEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            PK+ VD A R +    EE++KLRAQVEELT K+QLQ++ELERTT+QLKEA+AVA EET K
Sbjct: 853  PKLAVDGAGRLNDSLREEIVKLRAQVEELTNKAQLQDVELERTTKQLKEAIAVAEEETTK 912

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNS---FHSSPTPAWDVSSAAIEQPSSPLTF 895
            C+AAK+VIKSLTAQLK++AE +PVGA RNSNS   + SS T  WDVS   +EQ SSP   
Sbjct: 913  CKAAKEVIKSLTAQLKEVAERVPVGASRNSNSPSFYCSSNTTPWDVSPGILEQLSSPTAC 972

Query: 896  QGAIPNGSNSLILSN--GSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQD 953
                  GSNSL++SN  G+    N++P  +E +  E T +NKNR  K EP  GDEWVEQD
Sbjct: 973  HEQDSKGSNSLVISNVSGTTTTTNQTPHHSEVTQIETTVRNKNRIAKVEPTNGDEWVEQD 1032

Query: 954  ETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSI 1013
            E GVYITLV+L GG KDLKRVRFSRK+FSEKQAEQWWAANRARVYQQYNV M D+S VS+
Sbjct: 1033 EPGVYITLVSLHGGAKDLKRVRFSRKRFSEKQAEQWWAANRARVYQQYNVPMGDRSIVSV 1092

Query: 1014 GREGLAH 1020
            GREGL  
Sbjct: 1093 GREGLTQ 1099


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score = 1469 bits (3804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 771/1027 (75%), Positives = 868/1027 (84%), Gaps = 16/1027 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWF+GLKALISRSH+RK R ESRS
Sbjct: 88   PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKSRTESRS 147

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D + S   SPR +T+RSSPL+SPFGS  S QKD  D L +H+ YESPPKN LDK  SD V
Sbjct: 148  DGILSEVNSPRTYTRRSSPLNSPFGSNDSLQKDA-DHLRIHSPYESPPKNGLDKTFSDVV 206

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LYA PPK   PS+SA GSV+SLSSGGSD   GH+K ++ D FRVSLSSAVSSSSQGSGHD
Sbjct: 207  LYAVPPKGFFPSDSASGSVHSLSSGGSDSVHGHMKAVAMDAFRVSLSSAVSSSSQGSGHD 266

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DG+++GDVFIWGE TGDG+LGGG HR GS+ GVKMDS +PKA+ESAVVLDVQNIACGG+H
Sbjct: 267  DGEAMGDVFIWGEGTGDGVLGGGTHRVGSFFGVKMDSLLPKALESAVVLDVQNIACGGQH 326

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AALVTKQGE+FSWGEE GGRLGHGVDSDV HP+LI+AL N N+E VACGE+HTCAVTLSG
Sbjct: 327  AALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHTCAVTLSG 386

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG    NFGLLGHGNE+S W+PK++NGPLEGIHVSS+SCGPWHTAVV+SAGQLFTF
Sbjct: 387  DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTF 446

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGDR S+S PREV+SLKGLRTV+AACGVWHTAAVVEVMVG+SSSSNCSSGK
Sbjct: 447  GDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGK 506

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGHGDKEA+LVPTCV+ALVEPNFCQV+CGHSLT+A TT+GHVYTMGSPV
Sbjct: 507  LFTWGDGDKGRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSLTIARTTSGHVYTMGSPV 566

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P+++GKLP RVEGKL+++ VEEIACG YHVAVLTS+TEVYTWGKGANGRLGHGD
Sbjct: 567  YGQLGNPQSDGKLPARVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGD 626

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
            TDD+N PSLVEALKDKQVKSI CGT+FTAAICLHKWVSGVDQSMCSGCR+P NFKRKRHN
Sbjct: 627  TDDKNLPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPLNFKRKRHN 686

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLVYCH+CSSKKS+KASMAPNPNK YRVCDNC+ KL KA ET +SS S+VSRRGS+
Sbjct: 687  CYNCGLVYCHSCSSKKSLKASMAPNPNKAYRVCDNCYNKLRKAMETDASSQSSVSRRGSV 746

Query: 665  NQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG +E ++  E   +RS  Q    +SMESLK+ ES  SKRNKK EFN +R  P+PNG S
Sbjct: 747  NQGPSEFIDKDEKLDTRSRAQLARFSSMESLKQAES-RSKRNKKLEFNSSRVSPVPNGGS 805

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
            Q  A N SKS NP+F S+KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTL GL S
Sbjct: 806  QWGAFNISKSFNPMFASSKKFFSASVPGSRIISRATSPISRRPSPPRSTTPTPTLGGLTS 865

Query: 783  PKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            PKIVVDDAKRT+E    EV+KLRAQVE L+ K+QLQE+ELER T +LKEA A+AGEETAK
Sbjct: 866  PKIVVDDAKRTNESLSQEVLKLRAQVENLSHKTQLQEVELERITERLKEARAIAGEETAK 925

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN-----SFHSSPTPAWDVSSAAIEQPSSPL 893
            C+AAK+VIKSLTAQLKDMAE LPVGA R+       SF SSPT   DVS+  I+  +   
Sbjct: 926  CKAAKEVIKSLTAQLKDMAERLPVGAARSIKSPLFASFGSSPTSN-DVST--IDCLNGQS 982

Query: 894  TFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQD 953
            T Q    NG +  +LSN S    NR        H EAT KN +R  +AE     EWVEQD
Sbjct: 983  TCQEPDANGLHIQLLSNVSSTISNRGAGHNNQGHLEATIKNGSRNKEAEWRHEAEWVEQD 1042

Query: 954  ETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSI 1013
            E GVYITL +LPGG+KDLKRVRFSRK+FSEKQAEQWWA NRARVY++YNV M+DKSSV +
Sbjct: 1043 EPGVYITLTSLPGGIKDLKRVRFSRKRFSEKQAEQWWAENRARVYEKYNVRMIDKSSVGV 1102

Query: 1014 GREGLAH 1020
            G E LAH
Sbjct: 1103 GSEDLAH 1109


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score = 1440 bits (3727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 770/1022 (75%), Positives = 866/1022 (84%), Gaps = 8/1022 (0%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWF+GLKALISRSH+RK R ESRS
Sbjct: 105  PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKWRTESRS 164

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D + S A SPR +T+RSSPL SPFGS  SSQKD  D L LH+ YESPPKN LDKAL D V
Sbjct: 165  DGIPSEANSPRTYTRRSSPLHSPFGSNESSQKDSGDHLRLHSPYESPPKNGLDKAL-DVV 223

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LYA P K   P +SA  SV+S+SSGGSD   GH+K +  D FRVSLSSAVSSSSQGSGHD
Sbjct: 224  LYAVPQKSFFPLDSASASVHSISSGGSDSMHGHMKTMGMDAFRVSLSSAVSSSSQGSGHD 283

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DGD+LGDVFIWGE TGDG++GGG HR GS  GVK+DS  PKA+ESAVVLDVQNIACGGRH
Sbjct: 284  DGDALGDVFIWGEGTGDGVVGGGNHRVGSGLGVKIDSLFPKALESAVVLDVQNIACGGRH 343

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AALVTKQGE+FSWGEE GGRLGHGVDSDV HPKLIDAL N N+ELVACGE+HTCAVTLSG
Sbjct: 344  AALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSG 403

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG    N+GLLGHGN++S W+PK++NGPLEGIHVS +SCGPWHTAVVTSAGQLFTF
Sbjct: 404  DLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTF 463

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFG LGHGDR SVS PREV+SLKGLRT+RA+CGVWHTAAVVEVMVG+SSSSNCSSGK
Sbjct: 464  GDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGK 523

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGHGDKEA+LVPTCV ALVE NFCQV+CGHSLTVALTT+GHVY MGSPV
Sbjct: 524  LFTWGDGDKGRLGHGDKEAKLVPTCV-ALVEHNFCQVACGHSLTVALTTSGHVYAMGSPV 582

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P+A+GKLPTRVEGKL K+FVEEIACG YHVAVLT R EVYTWGKGANGRLGHGD
Sbjct: 583  YGQLGNPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGD 642

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
            TDDRN P+LV+ALKDK VKSI CGT+FTAAICLHKWVSGVDQSMCSGCR+PFNFKRKRHN
Sbjct: 643  TDDRNNPTLVDALKDKHVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHN 702

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+CSSKKS+KASMAPNPNKPYRVCD CF KL K  ET SSSHS+VSRRGS+
Sbjct: 703  CYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDGCFNKLRKTLETDSSSHSSVSRRGSI 762

Query: 665  NQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG  E ++  +   +RS  Q    +SMES K+VES SSK+NKK EFN +R  P+PNG S
Sbjct: 763  NQGSLELIDKDDKLDTRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNGGS 822

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
            Q  ALN SKS NPVFGS+KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTL GL +
Sbjct: 823  QRGALNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTT 882

Query: 783  PKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            PKIVVDDAK+T    S+EVIKLR+QVE LTRK+QLQEIELERT++QLK+A+A+AGEETAK
Sbjct: 883  PKIVVDDAKKTNDSLSQEVIKLRSQVESLTRKAQLQEIELERTSKQLKDAIAIAGEETAK 942

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGA 898
            C+AAK+VIKSLTAQLKDMAE LPVG  ++  S   +   + ++S AAI++ +   T   A
Sbjct: 943  CKAAKEVIKSLTAQLKDMAERLPVGTAKSVKSPSIASFGSNELSFAAIDRLNIQATSPEA 1002

Query: 899  IPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVY 958
               GSN+ +LSNGS    NRS  Q + S  ++T +N +RT  +E     EWVEQDE GVY
Sbjct: 1003 DLTGSNTQLLSNGSSTVSNRSTGQNKQSQSDSTNRNGSRTKDSESRSETEWVEQDEPGVY 1062

Query: 959  ITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIGREGL 1018
            ITL +LPGG+ DLKRVRFSRK+FSEKQAE WWA NR RVY+QYNV MVDKSSV +G E L
Sbjct: 1063 ITLTSLPGGVIDLKRVRFSRKRFSEKQAENWWAENRVRVYEQYNVRMVDKSSVGVGSEDL 1122

Query: 1019 AH 1020
            A+
Sbjct: 1123 AN 1124


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score = 1436 bits (3717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 771/1028 (75%), Positives = 862/1028 (83%), Gaps = 15/1028 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWF+GLKALISRSH+RK R ESRS
Sbjct: 82   PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKWRTESRS 141

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D + S A SPR +T+RSSPL+SPFGS  S QKD  D L LH+ YESPPKN LDKAL D V
Sbjct: 142  DGIPSEANSPRTYTRRSSPLNSPFGSNESLQKDCGDHLRLHSPYESPPKNGLDKAL-DVV 200

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LYA P K   P +SA  SV+S+SSGGSD   GH+K +  D FRVSLSSAVS+SSQGSGHD
Sbjct: 201  LYAVPQKGFFPPDSASASVHSVSSGGSDSMHGHMKTMGMDAFRVSLSSAVSTSSQGSGHD 260

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DGD+LGDVFIWGE TGDG+LGGG HR GS  G KMDS  PKA+ESAVVLDVQNIACGGRH
Sbjct: 261  DGDALGDVFIWGEGTGDGVLGGGNHRVGSCLGAKMDSLFPKALESAVVLDVQNIACGGRH 320

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AALVTKQGEVFSWGEE GGRLGHGVDSDV HPKLI+AL N N+ELVACGE+H+CAVTLSG
Sbjct: 321  AALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSCAVTLSG 380

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG    N+GLLGHGN++S W+PK++NGPLEGIHVS +SCGPWHTAVVTSAGQLFTF
Sbjct: 381  DLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTF 440

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFG LGHGDR SVS PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSS  
Sbjct: 441  GDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVD 500

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGH DKEA+LVPTCV AL E N CQV+CGHSLTVALTT+G VYTMGSPV
Sbjct: 501  LFTWGDGDKGRLGHVDKEAKLVPTCV-ALAEHNVCQVACGHSLTVALTTSGRVYTMGSPV 559

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P+A+GKLP  VEGKL+++FVEEIACG YHVAVLTSRTEVYTWGKGANGRLGHGD
Sbjct: 560  YGQLGNPQADGKLPILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGD 619

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
            TDDRN P+LVEALKDK VKSI CGT+FTAAICLHKWVSGVDQSMCSGCR+PFNFKRKRHN
Sbjct: 620  TDDRNTPTLVEALKDKDVKSIACGTTFTAAICLHKWVSGVDQSMCSGCRMPFNFKRKRHN 679

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+CSSKKS+KASMAPNPNKPYRVCDNC  KL K  ET +SSHS+VSRRGS+
Sbjct: 680  CYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCLNKLRKTVETDASSHSSVSRRGSV 739

Query: 665  NQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG  E ++  +   SRS  Q    +SMES K+VES SSK+NKK EFN +R  P+PNG S
Sbjct: 740  NQGPLELIDKDDKLDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNGGS 799

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
            Q  ALN SKS NPVFGS+KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTL GLAS
Sbjct: 800  QWGALNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLAS 859

Query: 783  PKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            PKIVVDDAKRT    S+EVIKLR+QVE LTRK+QLQE+ELERT +QLK+A+A+AGEETAK
Sbjct: 860  PKIVVDDAKRTNDSLSQEVIKLRSQVENLTRKAQLQEVELERTAKQLKDAIAIAGEETAK 919

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRN------SNSFHSSPTPAWDVSSAAIEQPSSP 892
            C+AAK+VIKSLTAQLKDMAE LPVGA R       ++SF S P    DVS A+ ++ +  
Sbjct: 920  CKAAKEVIKSLTAQLKDMAERLPVGAARTVKSPTLASSFGSIPCSN-DVSYASTDRLNIQ 978

Query: 893  LTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQ 952
             T   A   GSN  + SNGS    +RS   T+ S  ++T +N +RT  +E     EWVEQ
Sbjct: 979  ATSPEADLTGSNYQLHSNGSSTVSSRSAGHTKQSQPDSTNRNGSRTKDSESRNETEWVEQ 1038

Query: 953  DETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVS 1012
            DE GVYITL +LPGG+ DLKRVRFSRK+FSEKQAEQWWA NR RVY+QYNV M+DKSSV 
Sbjct: 1039 DEPGVYITLTSLPGGIIDLKRVRFSRKRFSEKQAEQWWAENRGRVYEQYNVCMIDKSSVG 1098

Query: 1013 IGREGLAH 1020
            +G E LAH
Sbjct: 1099 VGSEDLAH 1106


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score = 1425 bits (3689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 772/1029 (75%), Positives = 863/1029 (83%), Gaps = 15/1029 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWF+GLKALISRSH+RK R ESRS
Sbjct: 83   PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKWRTESRS 142

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D + S A SPR +T+RSSP++SPFGS  S QKD  D L LH+ YESPPKN LDKAL D V
Sbjct: 143  DGIPSEANSPRTYTRRSSPMNSPFGSNESLQKDSGDHLRLHSPYESPPKNGLDKAL-DVV 201

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LYA P K   P +SA  SV+S+SSGGSD   G +K +  D FRVSLSSAVS+SSQGSGHD
Sbjct: 202  LYAVPQKGFFPPDSASASVHSVSSGGSDSMHGQMKTMGMDAFRVSLSSAVSTSSQGSGHD 261

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DGD+LGDVFIWGE TGDG+LGGG HR GS  GVKMDS  PK++ESAVVLDVQNIACGGRH
Sbjct: 262  DGDALGDVFIWGEGTGDGVLGGGNHRVGSCLGVKMDSLFPKSLESAVVLDVQNIACGGRH 321

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AALVTKQGE+FSWGEE GGRLGHGVDSDV HPKLI+AL N N+ELVACGE+HTCAVTLSG
Sbjct: 322  AALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTCAVTLSG 381

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG    N GLLGHGN++S W+PK++NGPLEGIHVS +SCGPWHTAVVTSAGQLFTF
Sbjct: 382  DLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTF 441

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFG LGHGDR SVS PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGK
Sbjct: 442  GDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 501

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAAL-VEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            LFTWGDGD+GRLGHGDKEA+LVPT VA + V+PNFCQV+CGHSLTVALTT GHVYTMGSP
Sbjct: 502  LFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSP 561

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            VYGQLG P+A+GKLP  VE KL+++FVEEIACG YHVAVLTSRTEVYTWGKGANGRLGHG
Sbjct: 562  VYGQLGIPQADGKLPICVEWKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHG 621

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            DTDDRN P+LVEALKDK VKSI CGT+FTAAICLHKWVSGVDQSMCSGCR+PFNFKRKRH
Sbjct: 622  DTDDRNTPTLVEALKDKDVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRMPFNFKRKRH 681

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCYNCGLV+CH+CSSKKS+KASMAPNPNKPYRVCDNCF KL K  ET SSSHS+VSRRG 
Sbjct: 682  NCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTVETDSSSHSSVSRRGV 741

Query: 664  MNQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGV 721
             NQG  E ++  +   SRS  Q    +SMES K+VES SSK+NKK EFN +R  P+PNG 
Sbjct: 742  ANQGPLELIDKDDKLDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPIPNGG 801

Query: 722  SQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLA 781
            SQ  A N SKS NPVFGS+KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTL GL 
Sbjct: 802  SQWGASNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLT 861

Query: 782  SPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETA 837
            SP IVVDDAKRT    S+EVIKLR+QVE LTRK+QLQE+ELERTT+QLK+A+A+AGEETA
Sbjct: 862  SPNIVVDDAKRTNDSLSQEVIKLRSQVENLTRKAQLQEVELERTTKQLKDAIAIAGEETA 921

Query: 838  KCRAAKDVIKSLTAQLKDMAEMLPVGAVRN------SNSFHSSPTPAWDVSSAAIEQPSS 891
            KC+AAK+VIKSLTAQLKDMAE LPVGA R       + SF S+P    DVS A+I++ + 
Sbjct: 922  KCKAAKEVIKSLTAQLKDMAERLPVGAARTVKSPTLTASFGSNPCSN-DVSYASIDRLNI 980

Query: 892  PLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVE 951
              T   A   GSN+ + SNGS    +RS   T+ S  ++T +N +RT  +E     EWVE
Sbjct: 981  QATSPEADLTGSNNHLHSNGSSTVSSRSTGHTKQSQSDSTNRNGSRTKDSESRNETEWVE 1040

Query: 952  QDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSV 1011
            QDE GVYITL +LPGG+ DLKRVRFSRK+FSEKQAEQWWA NR RVY+QYNV M+DKSSV
Sbjct: 1041 QDEPGVYITLTSLPGGIIDLKRVRFSRKRFSEKQAEQWWAENRGRVYEQYNVRMIDKSSV 1100

Query: 1012 SIGREGLAH 1020
             +G E LAH
Sbjct: 1101 GVGSEDLAH 1109


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score = 1419 bits (3674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 755/1029 (73%), Positives = 866/1029 (84%), Gaps = 19/1029 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWF+GLKALISRSH+RK R ESRS
Sbjct: 84   PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKWRPESRS 143

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D + S A SPR +T+RSSPL+SPFGS  S QKD  D L LH+ YESPPKN LDKA SD +
Sbjct: 144  DGIPSEANSPRTYTRRSSPLNSPFGSNESLQKDSGDHLRLHSPYESPPKNGLDKAFSDVI 203

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
             Y  PP      +SA GS++S+SSGGSD   G +K +  D FRVSLSSAVSSSSQGSGHD
Sbjct: 204  YYPIPPMGFFRPDSASGSLHSVSSGGSDSMHGQMKTMPMDAFRVSLSSAVSSSSQGSGHD 263

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DGD+LGDVFIWGE  GDG+LGGG+H+ GS  GVKMDS +PKA+ESAVVLDVQNIACGG+H
Sbjct: 264  DGDALGDVFIWGEGMGDGVLGGGVHQVGSNFGVKMDSLLPKALESAVVLDVQNIACGGKH 323

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AALVTKQGEVFSWGEE GGRLGHGVDSDV HPKLI++L N N+ELVACGE+HTCAVTLSG
Sbjct: 324  AALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSG 383

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG    N+GLLGHGN++S W+PK++NGPLEGIHVSS+SCGPWHTAVVTS+GQLFTF
Sbjct: 384  DLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTF 443

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFG LGHGDR SVS PRE++SLKGLRTV+AACGVWHTAAVVEVMVG+SSSSNCSSGK
Sbjct: 444  GDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGK 503

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGHGDKE++LVPTCV  LVEPN CQV+CGHS+TVAL+ +GHVYTMGS V
Sbjct: 504  LFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPN-CQVACGHSMTVALSRSGHVYTMGSCV 562

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+ +A+GKLP RVEGKL+K+FVEEIACG YHVAVLTSRTEV+TWGKGANGRLGHGD
Sbjct: 563  YGQLGNTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGD 622

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
            T+DRN P+LVEALKDKQVKSI CGT+FTAAICLHKWVSGVDQSMCSGCR+PFNFKRKRHN
Sbjct: 623  TNDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRVPFNFKRKRHN 682

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+CS+KKSVKASMAPNPNKPYRVCDNCF K+ K TET SSS S++SRRGS+
Sbjct: 683  CYNCGLVFCHSCSNKKSVKASMAPNPNKPYRVCDNCFNKIRKTTETDSSSQSSMSRRGSL 742

Query: 665  NQGFN-EAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGV 721
            NQG++ E     +   SRSH Q    +SMESLK+V+S SSK+NKK EFN +R  P PNG 
Sbjct: 743  NQGWSLEFNGKDDKLDSRSHNQLARFSSMESLKQVDSRSSKKNKKLEFNSSRVSPAPNGG 802

Query: 722  SQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLA 781
            SQ  A+N SKS NP FGS+KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTL GL+
Sbjct: 803  SQWGAMNISKSFNPGFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLS 862

Query: 782  SPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETA 837
            SPK+VVDDAKR     S+EV+KLR+QVE LTRK+QLQE+ELERTT+QLKEA+A+A EETA
Sbjct: 863  SPKMVVDDAKRINDNLSQEVVKLRSQVENLTRKAQLQEVELERTTKQLKEAIAIASEETA 922

Query: 838  KCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN------SFHSSPTPAWDVSSAAIEQPSS 891
            KC+AAK+VIKSLTAQLKDMAE LPVGA RN        SF  +P    D+++A+ ++ + 
Sbjct: 923  KCKAAKEVIKSLTAQLKDMAERLPVGASRNVRSPPSLASFGLNPGSN-DLTNASFDRLNI 981

Query: 892  PLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVE 951
              T   +   GS + ILSNGS    NRS    + S  +A ++N N+T   E     EWVE
Sbjct: 982  QATSPESDSTGSTNQILSNGSSTITNRSAGHIKHSQSDAISRNGNKTKDNE----TEWVE 1037

Query: 952  QDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSV 1011
            QDE GVYITL +LPGG+ DLKRVRFSRK+FSEKQAEQWWA NRARVY+QYNV M+DKS++
Sbjct: 1038 QDEPGVYITLTSLPGGVIDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNVRMIDKSTI 1097

Query: 1012 SIGREGLAH 1020
             +G E +AH
Sbjct: 1098 GVGSEDMAH 1106


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score = 1408 bits (3645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 742/998 (74%), Positives = 832/998 (83%), Gaps = 22/998 (2%)

Query: 32   ICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDEVSSVATSPRAHTQRSSPLSSPFGSG 91
            ICKDK+EAEVWFTGLKALIS     K R E+R+D + S A SPRA+T RSSPLS  FGS 
Sbjct: 79   ICKDKEEAEVWFTGLKALISHHQLWKKREETRNDGLLSEANSPRAYTLRSSPLSFAFGSD 138

Query: 92   GSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGS 151
             SS KDG DPL L T Y+SPPK  L+KALSDAV Y  PPKVL P ESACG        GS
Sbjct: 139  DSSMKDGTDPLRLRTPYDSPPKAGLEKALSDAV-YTVPPKVLFPLESACGP-------GS 190

Query: 152  DGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRS 211
            D  TG +K  + + FRVSLSSAVSSSSQGSG DD D+LGDV+IWGE TG+GILGGG+H+S
Sbjct: 191  DETTGRMKNTNTEAFRVSLSSAVSSSSQGSGRDDNDALGDVYIWGEGTGEGILGGGVHKS 250

Query: 212  GSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS 271
            G  + ++MDSFVPKA+ESAV+LDVQ IACG +HAALVTKQGEVFSWGEELGGRLGHGVDS
Sbjct: 251  GG-SDIQMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDS 309

Query: 272  DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK 331
            DVSHPK +D LKN NVELVACGE+ +CAVTLSGD+Y WGG+  NFGLLG G+E + W+P+
Sbjct: 310  DVSHPKFVDGLKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPR 369

Query: 332  KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
            KL+GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR SVSTPREV+SLKG
Sbjct: 370  KLSGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKG 429

Query: 392  LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
            LRT+R ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD+GRLGHGDKEARLVPT VA
Sbjct: 430  LRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVA 489

Query: 452  ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE 511
             LVEP+FCQV+CGHSLTVALTT+G VYTMGSPVYGQLG+P+A+GK+PTRVEGKL KNFVE
Sbjct: 490  TLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKVPTRVEGKLMKNFVE 549

Query: 512  EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            E+ACG YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS+VEALKDKQVK I+CGTSF
Sbjct: 550  ELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSIVEALKDKQVKGIICGTSF 609

Query: 572  TAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPN 631
            TAAICLHKWVSG+DQSMCSGCR+PFNFKRKRHNCYNCGLV+CH+CSSKKS+KASMAPNPN
Sbjct: 610  TAAICLHKWVSGIDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPN 669

Query: 632  KPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGT--S 689
            KPYRVCD CF K+ ++T T SS HST+ RRGS NQG NE  E  EN  +RSH + G   S
Sbjct: 670  KPYRVCDYCFSKIRRSTGTDSSVHSTLRRRGSENQGLNEITEKSENSNTRSHAKLGRNFS 729

Query: 690  MESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLP 749
            MES K+VES SS+RN+K     T+  P    VSQ NA NNSKS    FGS+KKFFSAS+P
Sbjct: 730  MESSKEVESISSRRNRKSSSISTQVSPSAYDVSQRNAFNNSKS----FGSSKKFFSASVP 785

Query: 750  GSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTS----EEVIKLRAQVE 805
            GSRI+SRATSPTSRRSSPPRATTPTP LS    PK+ VD   R +    EEV+KLRAQVE
Sbjct: 786  GSRIVSRATSPTSRRSSPPRATTPTPALSVHELPKVAVDGTGRLNDSLREEVVKLRAQVE 845

Query: 806  ELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAV 865
            ELT K+QLQE+ELERTT QLKEA+AVA EETAKC+AAK+VIKSLTAQLKD+AE +PVGA 
Sbjct: 846  ELTHKAQLQEVELERTTSQLKEAVAVAEEETAKCKAAKEVIKSLTAQLKDVAERVPVGAA 905

Query: 866  RNSNS---FHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQ 922
            RN+NS   ++SS TP   VS   +EQ   P T      NGSNSL++SN S    N++P  
Sbjct: 906  RNNNSPSFYYSSNTPLRAVSPGVLEQLRGPRTCHEQDSNGSNSLVVSNVSAPTTNQTPHH 965

Query: 923  TEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFS 982
            +E +H EAT +NKNRT K EP  GDEWVEQDE GVYITLV+LPGG KDLKRVRFSRK+FS
Sbjct: 966  SEVAHIEATLRNKNRTAKVEPTNGDEWVEQDEPGVYITLVSLPGGAKDLKRVRFSRKRFS 1025

Query: 983  EKQAEQWWAANRARVYQQYNVSMVDKSSVSIGREGLAH 1020
            EKQAEQWWA+NRAR+YQQYNV M ++S VS+GREGLAH
Sbjct: 1026 EKQAEQWWASNRARLYQQYNVPMGERSLVSVGREGLAH 1063


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score = 1402 bits (3628), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 752/1028 (73%), Positives = 859/1028 (83%), Gaps = 17/1028 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWF+GLKALISR H+ K R ESR+
Sbjct: 77   PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRGHHWKWRPESRT 136

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D + S A SPR +T+RSSPL+SPFGS  S QKD  D L LH+ YESPPKN LDKA SD V
Sbjct: 137  DGIPSEANSPRTYTRRSSPLNSPFGSNESLQKDSGDHLRLHSPYESPPKNGLDKAFSDVV 196

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
             Y  PP    P +SA GSV+S+SSGGSD   G +K +  D FRVSLSSAVSSSSQGSGHD
Sbjct: 197  YYPIPPMGFFPPDSASGSVHSVSSGGSDSMHGQMKTMPMDAFRVSLSSAVSSSSQGSGHD 256

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DGD+LGDVFIWGE TGDG+LGGG H  GS  GVKMDS +PKA+ESAVVLDVQNIACGG H
Sbjct: 257  DGDALGDVFIWGEGTGDGVLGGGAHHVGSNFGVKMDSLLPKALESAVVLDVQNIACGGEH 316

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AA+VTKQGEVFSWG E GGRLGHGVDSDV HPKLI++L N N+ELVACGE+HTCAVTLSG
Sbjct: 317  AAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSG 376

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG    N+GLLGHGN++S W+PK++NGPLEGIHVSS+SCGPWHTAVVTS+GQLFTF
Sbjct: 377  DLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTF 436

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGDR SVS PRE++SLKGLRTV+AACGVWHTAAVVEVMVG+SSSSNCSSGK
Sbjct: 437  GDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGK 496

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGHGDKE++LVPT V  L EPNFCQV+CGHS+TVAL+  GHVYTMGS V
Sbjct: 497  LFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCV 556

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YG LG+ +A+GKLPT VEGKL+K+FVEEIACG YHVAVLTSRTEV+TWGKGANG LGHGD
Sbjct: 557  YGHLGNTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGD 616

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
            T+DRN P+LVEALKDKQVKSI CGT+FTAAICLHKWVSGVDQSMCSGCR+PFNFKRKRHN
Sbjct: 617  TNDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRVPFNFKRKRHN 676

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGL +CH+CS+KKSVKASMAPNPNKPYRVCDNCF K+ K TET SSS +++SRRGS+
Sbjct: 677  CYNCGLAFCHSCSNKKSVKASMAPNPNKPYRVCDNCFNKIRKTTETDSSSQASMSRRGSV 736

Query: 665  NQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG  E     +   SRSH Q    +SMESLK+V+S SSK+NKK EFN +R  P PNG S
Sbjct: 737  NQGSLEFNGKDDKLDSRSHNQLARFSSMESLKQVDSRSSKKNKKLEFNSSRVSPAPNGGS 796

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
            Q  A+N SKS NPVFGS+KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTL GL+S
Sbjct: 797  QWGAMNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLSS 856

Query: 783  PKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            PKIVVDDAKR     S+EV+KLR+QVE LTRK+QLQE+ELERTT+QLKEA+A+A EETAK
Sbjct: 857  PKIVVDDAKRINDNLSQEVVKLRSQVENLTRKAQLQEVELERTTKQLKEAIAIASEETAK 916

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN------SFHSSPTPAWDVSSAAIEQPSSP 892
            C+AAK+VIKSLTAQ KDMAE LPVGA RN+       SF  +P    D+++A+ ++ +  
Sbjct: 917  CKAAKEVIKSLTAQWKDMAERLPVGASRNARSPPSLASFGLNPGSN-DLTNASFDRLNIQ 975

Query: 893  LTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQ 952
             T   +  NGS + +LSNGS    NRS    + S  +AT++N ++T   E     EWVEQ
Sbjct: 976  ATSPESDLNGSTNQLLSNGSSTITNRSAGHIKHSQSDATSRNGSKTKDNE----TEWVEQ 1031

Query: 953  DETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVS 1012
            DE GVYITL +LPGG+ DLKRVRFSRK+FSEKQAEQWWA NRARVY+QYNV M+DKS++ 
Sbjct: 1032 DEPGVYITLTSLPGGVIDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNVHMIDKSTIG 1091

Query: 1013 IGREGLAH 1020
            +G E LAH
Sbjct: 1092 VGSEDLAH 1099


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score = 1384 bits (3583), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1026 (71%), Positives = 845/1026 (82%), Gaps = 12/1026 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKE QSFSLIYN+RSLDLICKDKDE EVWF+GLKALISR H RK R ESRS
Sbjct: 80   PIFQRYPRPEKECQSFSLIYNERSLDLICKDKDETEVWFSGLKALISRIHNRKWRTESRS 139

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D + S   SPR  TQRSSPL SPF S  S QK+G +P+ LH+ Y SPPK  LDKALSD +
Sbjct: 140  DGMLSEVNSPRTFTQRSSPLHSPFSSNDSVQKEGGEPIRLHSPYGSPPKYGLDKALSDVM 199

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LY  PPK    S+SA GSV+SLSSGGSD   GH+K +  D FRVSLSSAVSSSSQGSG+D
Sbjct: 200  LYNIPPKGFFHSDSASGSVHSLSSGGSDSMHGHMKTVPMDAFRVSLSSAVSSSSQGSGND 259

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            D D+LGDVFIWGE TG+G+LGGG  R GS    K+DS +PKA+ES VVLDVQNIACG RH
Sbjct: 260  DCDALGDVFIWGEGTGEGVLGGGTRRVGSSFDSKIDSLLPKALESVVVLDVQNIACGNRH 319

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AALVTKQGEVFSWGEE GGRLGHG DSD  HPKLIDAL N+N+ELVACGE+HTCAVTLSG
Sbjct: 320  AALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSG 379

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG    N GLLGHG ++S W+PK++ GPL+G+H+SS+SCGPWHTA+VTSAG+LFTF
Sbjct: 380  DLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTF 439

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEV++G+ +S+N SSGK
Sbjct: 440  GDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGK 499

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGHGDKEARLVPTCVAALVEPNFCQV+CGHSLTVALT +GH+YTMGSPV
Sbjct: 500  LFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPV 559

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P+A+GKLP RVEGKL+K+FVEE+ACG YHVAVLTSRTEVYTWGKGANGRLGHG 
Sbjct: 560  YGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGS 619

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
            TDDRN P+LVEALKDKQVKSI CGT+FTAAICLHKWVSGVDQSMCSGCR+PFNFKRKRHN
Sbjct: 620  TDDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHN 679

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+CSSKKS+KASMAPNPNK YRVCDNC+ KL K  E  +SS S++SRRGS+
Sbjct: 680  CYNCGLVFCHSCSSKKSLKASMAPNPNKVYRVCDNCYHKLKKFIEMDTSSQSSLSRRGSI 739

Query: 665  NQGFNEAVEHGE--NFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG  E V   +  +   RS +    S+ES K+VES  SK+NKK EF+ +R  P+P+G S
Sbjct: 740  NQGSTEPVNKNDKLDLKPRSQLARLPSVESFKQVESQFSKKNKKLEFSSSRVSPIPSGGS 799

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
            Q  +LN SKS NPVFGS+KKFF+ASLPGSRI+SRATSP SRR SPPR+TTPTPTL GL S
Sbjct: 800  QRGSLNISKSFNPVFGSSKKFFAASLPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTS 859

Query: 783  PKIVVDDAK----RTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            P+I V+DAK    R S+EVI+LRAQVE LTRK+QLQE+ELERT++QLKEA+++A EE A+
Sbjct: 860  PRIAVNDAKSTNNRLSQEVIRLRAQVENLTRKAQLQEVELERTSKQLKEAISIASEEAAR 919

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN----SFHSSPTPAWDVSSAAIEQPSSPLT 894
            C AAK+VIKSLTAQLK+MAE LPVGA RN      SF S P P   + +  I+Q S   T
Sbjct: 920  CNAAKEVIKSLTAQLKEMAERLPVGAARNIKSTLASFSSGP-PFNHLINTFIDQLSGQET 978

Query: 895  FQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDE 954
                  N S+  +LSNGS   +N+S +Q+++S  + + KN NR  + E  Q  EWVEQDE
Sbjct: 979  SLETDSNSSSVQLLSNGSSTANNQSSTQSKSSQLD-SAKNGNRIKETESRQEAEWVEQDE 1037

Query: 955  TGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIG 1014
             GVYITL + PGG KDLKRVRFSRK+F+EKQAE WWA NRARVY++YNV ++DKSS+ IG
Sbjct: 1038 PGVYITLTSQPGGAKDLKRVRFSRKRFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIG 1097

Query: 1015 REGLAH 1020
             E L H
Sbjct: 1098 SEELTH 1103


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score = 1379 bits (3569), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 753/1028 (73%), Positives = 850/1028 (82%), Gaps = 18/1028 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWF GLK LISRSH+RK R ESRS
Sbjct: 83   PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFNGLKTLISRSHHRKWRTESRS 142

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D + S A SPR +T+RSSPL+SPFGS  S QKDG     L + Y SPPKN +DKALSD +
Sbjct: 143  DGMQSEANSPRTYTRRSSPLNSPFGSNDSLQKDG--DFRLQSPYGSPPKNGMDKALSDVI 200

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LY  PPK   PS+SA  SVNSLSSG S+   G +K +  D FRVSLSSAVSSSSQGSGHD
Sbjct: 201  LYTVPPKGFFPSDSASISVNSLSSGSSEMH-GPMKAMGIDAFRVSLSSAVSSSSQGSGHD 259

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DGD+LGDVFIWGE TGDG+LGGG H+ GS   +KMDS +PKA+ESAVVLDVQNIACGGRH
Sbjct: 260  DGDALGDVFIWGEGTGDGVLGGGSHKVGSCFSLKMDSLLPKALESAVVLDVQNIACGGRH 319

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AALVTKQGE+F+WGEE GGRLGHGVDSDV  PKL+DAL N N+ELV+CGE+HTCAVTLSG
Sbjct: 320  AALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVTLSG 379

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG    NFGLLGHGNE+S W+PKK+NGPLEGIHVSS++CGPWHTAVVTSAGQLFTF
Sbjct: 380  DLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWHTAVVTSAGQLFTF 439

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGDR SV+ PREV+SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK
Sbjct: 440  GDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 499

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGHGDKE +LVPTCVAALV+PNFC+VSCGHS+TVALTT+GHVYTMGSPV
Sbjct: 500  LFTWGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPV 559

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P A+GK+P RVEGKL+K+FVEEIACG YHVAVLTSRTEVYTWGKGANGRLGHGD
Sbjct: 560  YGQLGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGD 619

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
            TDDRN P+LVEALKDKQVKSI CGT+FTAAICLHKWVSG DQSMCSGC +PFNFKRKRHN
Sbjct: 620  TDDRNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGFDQSMCSGCHLPFNFKRKRHN 679

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+CSSKK  KASMAPNPNKPYRVCDNC+ KL KA ET +SS S+VSRR S+
Sbjct: 680  CYNCGLVFCHSCSSKKCHKASMAPNPNKPYRVCDNCYNKLRKALETDASSQSSVSRRRSI 739

Query: 665  NQG---FNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGV 721
            NQG   F E  E  E+  SR+ +   +SMES+K+ E+  SK+NKK E N +R  P+PNG 
Sbjct: 740  NQGSTDFVEKEEKPESVKSRAQLARFSSMESVKQGENQFSKKNKKFECNSSRVSPVPNGG 799

Query: 722  SQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLA 781
            SQ  A+  SKS NPVFGS+KKFFSAS+PGSRI+SRATSP SRR+SPPR+TTPTPTL GL 
Sbjct: 800  SQWGAI--SKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRASPPRSTTPTPTLGGLT 857

Query: 782  SPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETA 837
            SPKI VDDAKRT    S+EV+KL+AQVE LTRK+QLQE+E+ERTT+QLKEALA A  E  
Sbjct: 858  SPKIAVDDAKRTNDSLSQEVVKLKAQVENLTRKAQLQEVEMERTTKQLKEALAFAAAEAT 917

Query: 838  KCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN-----SFHSSPTPAWDVSSAAIEQPSSP 892
            KC AAK+VI SLTAQLK+MAE LPVGA RN       S  SSP P  DV + +I++ +  
Sbjct: 918  KCNAAKEVIMSLTAQLKEMAERLPVGAARNIKSPSLASLGSSP-PFNDVVTPSIDRSNGQ 976

Query: 893  LTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQ 952
                 A    SNS +LSNGS     RS      ++ ++TT+N N+  +++     EWVEQ
Sbjct: 977  TMSLEADVIESNSHLLSNGSSTASIRSSGHNRPANSDSTTRNGNKVKESDSRHDAEWVEQ 1036

Query: 953  DETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVS 1012
            DE GVYIT  +L GG KDLKRVRFSRK+F+EKQAEQWWA NRARVY QYNV  +DKSSV 
Sbjct: 1037 DEPGVYITFTSLQGGAKDLKRVRFSRKRFTEKQAEQWWAENRARVYDQYNVRTIDKSSVG 1096

Query: 1013 IGREGLAH 1020
            +G E LAH
Sbjct: 1097 VGSEDLAH 1104


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101226798
            [Cucumis sativus]
          Length = 1103

 Score = 1376 bits (3562), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 729/1026 (71%), Positives = 843/1026 (82%), Gaps = 12/1026 (1%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKE QSFSLIYN+RSLDLICKDKDE EVWF+GLKALISR H RK R ESRS
Sbjct: 80   PIFQRYPRPEKECQSFSLIYNERSLDLICKDKDETEVWFSGLKALISRIHNRKWRTESRS 139

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D + S   SPR  TQRSSPL SPF S  S QK+G +P+ LH+ Y SPPK  LDKALSD +
Sbjct: 140  DGMLSEVNSPRTFTQRSSPLHSPFSSNDSVQKEGGEPIRLHSPYGSPPKYGLDKALSDVM 199

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LY  PPK    S+SA GSV+SLSSGGSD   GH+K +  D FRVSLSSAVSSSSQGSG+D
Sbjct: 200  LYNIPPKGFFHSDSASGSVHSLSSGGSDSMHGHMKTVPMDAFRVSLSSAVSSSSQGSGND 259

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            D D+LGD F  GE TG+G+LGGG  R GS    K+DS +PKA+ES VVLDVQNIACG RH
Sbjct: 260  DCDALGDXFYLGEGTGEGVLGGGTRRVGSSFDSKIDSLLPKALESVVVLDVQNIACGNRH 319

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AALVTKQGEVFSWGEE GGRLGHG DSD  HPKLIDAL N+N+ELVACGE+HTCAVTLSG
Sbjct: 320  AALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSG 379

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG    N GLLGHG ++S W+PK++ GPL+G+H+SS+SCGPWHTA+VTSAG+LFTF
Sbjct: 380  DLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTF 439

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEV++G+ +S+N SSGK
Sbjct: 440  GDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGK 499

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGHGDKEARLVPTCVAALVEPNFCQV+CGHSLTVALT +GH+YTMGSPV
Sbjct: 500  LFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPV 559

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P+A+GKLP RVEGKL+K+FVEE+ACG YHVAVLTSRTEVYTWGKGANGRLGHG 
Sbjct: 560  YGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGS 619

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
            TDDRN P+LVEALKDKQVKSI CGT+FTAAICLHKWVSGVDQSMCSGCR+PFNFKRKRHN
Sbjct: 620  TDDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHN 679

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+CSSKKS+KASMAPNPNK YRVCDNC+ KL K  E  +SS S++SRRGS+
Sbjct: 680  CYNCGLVFCHSCSSKKSLKASMAPNPNKVYRVCDNCYHKLXKFIEMDTSSQSSLSRRGSI 739

Query: 665  NQGFNEAVEHGE--NFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG  E V   +  +   RS +    S+ES K+VES  SK+NKK EF+ +R  P+P+G S
Sbjct: 740  NQGSMEPVNKNDKLDLKPRSQLARLPSVESFKQVESQFSKKNKKLEFSSSRVSPIPSGGS 799

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
            Q  +LN SKS NPVFGS+KKFF+ASLPGSRI+SRATSP SRR SPPR+TTPTPTL GL S
Sbjct: 800  QRGSLNISKSFNPVFGSSKKFFAASLPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTS 859

Query: 783  PKIVVDDAK----RTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            P+I V+DAK    R S+EVI+LRAQVE LTRK+QLQE+ELERT++QLKEA+++A EE A+
Sbjct: 860  PRIAVNDAKSTNNRLSQEVIRLRAQVENLTRKAQLQEVELERTSKQLKEAISIASEEAAR 919

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN----SFHSSPTPAWDVSSAAIEQPSSPLT 894
            C AAK+VIKSLTAQLK+MAE LPVGA RN      SF S P P  ++ +  I+Q S   T
Sbjct: 920  CNAAKEVIKSLTAQLKEMAERLPVGAARNIKSTLASFSSGP-PFNNLINTFIDQLSGQET 978

Query: 895  FQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDE 954
                  N S+  +LSNGS   +N+S +Q+++S  + + KN NR  + E  Q  EWVEQDE
Sbjct: 979  SLETDSNSSSVQLLSNGSSTANNQSSTQSKSSQLD-SAKNGNRIKETESRQEAEWVEQDE 1037

Query: 955  TGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIG 1014
             GVYITL + PGG KDLKRVRFSRK+F+EKQAE WWA NRARVY++YNV ++DKSS+ IG
Sbjct: 1038 PGVYITLTSQPGGAKDLKRVRFSRKRFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIG 1097

Query: 1015 REGLAH 1020
             E L H
Sbjct: 1098 SEELTH 1103


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
            finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
            finger domain [Arabidopsis thaliana]
          Length = 1139

 Score = 1354 bits (3505), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1035 (70%), Positives = 846/1035 (81%), Gaps = 32/1035 (3%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIY++RSLDLICKDKDEAEVWF+GLKALISR H RK R ESRS
Sbjct: 118  PIFQRYPRPEKEYQSFSLIYDERSLDLICKDKDEAEVWFSGLKALISRCHQRKWRTESRS 177

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D   S A SPR +T+RSSPL SPF S  S QK+G + L LH+ YESPPKN +DKA SD  
Sbjct: 178  DGTPSEANSPRTYTRRSSPLHSPFSSNESFQKEGSNHLRLHSPYESPPKNGVDKAFSDMS 237

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LYA PPK   P  SA  SV+SLSSGGSD   GH+KG+  D FRVSLSSA+SSSS GSGHD
Sbjct: 238  LYAVPPKGFFPPGSATMSVHSLSSGGSDTLHGHMKGMGMDAFRVSLSSAISSSSHGSGHD 297

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DGD+LGDVF+WGE  G+G+LGGG HR GS   +KMDS +PKA+ES +VLDVQNIACGG+H
Sbjct: 298  DGDTLGDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQH 357

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            A LVTKQGE FSWGEE  GRLGHGVDS+V HPKLIDAL   N+ELVACGE+H+CAVTLSG
Sbjct: 358  AVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSG 417

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG  +  FG+LGHGNE+S W+PK++N  +EGIHVSS++CGP+HTAVVTSAGQLFTF
Sbjct: 418  DLYTWGKGD--FGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTF 475

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGDR SV  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK
Sbjct: 476  GDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 535

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+ RLGHGDKE +LVPTCVAALVEPNFCQV+CGHSLTVALTT+GHVYTMGSPV
Sbjct: 536  LFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPV 595

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P A+GK+PTRV+GKL K+FVEEIACG YHVAVLTSRTEVYTWGKG+NGRLGHGD
Sbjct: 596  YGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGD 655

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
             DDRN P+LVE+LKDKQVKSI CG++FTAA+CLHKW SG+DQSMCSGCR PFNFKRKRHN
Sbjct: 656  ADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPFNFKRKRHN 715

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+CS+KKS+KA MAPNPNKPYRVCD CF KL KA ET  SSHS++SRR S+
Sbjct: 716  CYNCGLVFCHSCSNKKSLKACMAPNPNKPYRVCDRCFNKLKKAMETDPSSHSSLSRRESV 775

Query: 665  NQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG ++A++  E   +RS  Q    + +E +++V+S  SK+NKK EFN +R  P+P+G S
Sbjct: 776  NQG-SDAIDRDEKLDTRSDGQLARFSLLEPMRQVDS-RSKKNKKYEFNSSRVSPIPSGGS 833

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
               +LN +KS NP FGS+KKFFSAS+PGSRI SRATSP SRR SPPR+TTPTPTLSGL +
Sbjct: 834  HRGSLNITKSFNPTFGSSKKFFSASVPGSRIASRATSPISRRPSPPRSTTPTPTLSGLTT 893

Query: 783  PKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            PKIVVDD KR+    S+EV+ LR+QVE LTRK+QLQE+ELERTT+QLKEALA+A EE+A+
Sbjct: 894  PKIVVDDTKRSNDNLSQEVVMLRSQVENLTRKAQLQEVELERTTKQLKEALAIASEESAR 953

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNS-----NSFHSSPTPAWDVSSAAIEQPSS-- 891
            C+AAK+VIKSLTAQLKDMAE LPVG+ R       NSF SSP  A   SS  + +P+S  
Sbjct: 954  CKAAKEVIKSLTAQLKDMAERLPVGSARTVKSPSLNSFGSSPDYA-APSSNTLNRPNSRE 1012

Query: 892  ----PLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASH-CEATTKNKNRTMKAEPAQG 946
                 LT      NG+++ +  +GS         + +A+H  EA  +   R+ ++EP   
Sbjct: 1013 TDSDSLTTVPMFSNGTSTPVFDSGS--------YRQQANHAAEAINRISTRSKESEPRNE 1064

Query: 947  DEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSM- 1005
            +EWVEQDE GVYITL AL GG +DLKRVRFSRK+FSEKQAE+WWA NR RVY+QYNV + 
Sbjct: 1065 NEWVEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEKQAEEWWAENRGRVYEQYNVRIV 1124

Query: 1006 VDKSSVSIGREGLAH 1020
            VDKSSV +G E L H
Sbjct: 1125 VDKSSVGVGSEDLGH 1139


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
            finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
            finger domain [Arabidopsis thaliana]
          Length = 1105

 Score = 1353 bits (3503), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1035 (70%), Positives = 846/1035 (81%), Gaps = 32/1035 (3%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIY++RSLDLICKDKDEAEVWF+GLKALISR H RK R ESRS
Sbjct: 84   PIFQRYPRPEKEYQSFSLIYDERSLDLICKDKDEAEVWFSGLKALISRCHQRKWRTESRS 143

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D   S A SPR +T+RSSPL SPF S  S QK+G + L LH+ YESPPKN +DKA SD  
Sbjct: 144  DGTPSEANSPRTYTRRSSPLHSPFSSNESFQKEGSNHLRLHSPYESPPKNGVDKAFSDMS 203

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LYA PPK   P  SA  SV+SLSSGGSD   GH+KG+  D FRVSLSSA+SSSS GSGHD
Sbjct: 204  LYAVPPKGFFPPGSATMSVHSLSSGGSDTLHGHMKGMGMDAFRVSLSSAISSSSHGSGHD 263

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DGD+LGDVF+WGE  G+G+LGGG HR GS   +KMDS +PKA+ES +VLDVQNIACGG+H
Sbjct: 264  DGDTLGDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQH 323

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            A LVTKQGE FSWGEE  GRLGHGVDS+V HPKLIDAL   N+ELVACGE+H+CAVTLSG
Sbjct: 324  AVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSG 383

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG  +  FG+LGHGNE+S W+PK++N  +EGIHVSS++CGP+HTAVVTSAGQLFTF
Sbjct: 384  DLYTWGKGD--FGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTF 441

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGDR SV  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK
Sbjct: 442  GDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 501

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+ RLGHGDKE +LVPTCVAALVEPNFCQV+CGHSLTVALTT+GHVYTMGSPV
Sbjct: 502  LFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPV 561

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P A+GK+PTRV+GKL K+FVEEIACG YHVAVLTSRTEVYTWGKG+NGRLGHGD
Sbjct: 562  YGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGD 621

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
             DDRN P+LVE+LKDKQVKSI CG++FTAA+CLHKW SG+DQSMCSGCR PFNFKRKRHN
Sbjct: 622  ADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPFNFKRKRHN 681

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+CS+KKS+KA MAPNPNKPYRVCD CF KL KA ET  SSHS++SRR S+
Sbjct: 682  CYNCGLVFCHSCSNKKSLKACMAPNPNKPYRVCDRCFNKLKKAMETDPSSHSSLSRRESV 741

Query: 665  NQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG ++A++  E   +RS  Q    + +E +++V+S  SK+NKK EFN +R  P+P+G S
Sbjct: 742  NQG-SDAIDRDEKLDTRSDGQLARFSLLEPMRQVDS-RSKKNKKYEFNSSRVSPIPSGGS 799

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
               +LN +KS NP FGS+KKFFSAS+PGSRI SRATSP SRR SPPR+TTPTPTLSGL +
Sbjct: 800  HRGSLNITKSFNPTFGSSKKFFSASVPGSRIASRATSPISRRPSPPRSTTPTPTLSGLTT 859

Query: 783  PKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            PKIVVDD KR+    S+EV+ LR+QVE LTRK+QLQE+ELERTT+QLKEALA+A EE+A+
Sbjct: 860  PKIVVDDTKRSNDNLSQEVVMLRSQVENLTRKAQLQEVELERTTKQLKEALAIASEESAR 919

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNS-----NSFHSSPTPAWDVSSAAIEQPSS-- 891
            C+AAK+VIKSLTAQLKDMAE LPVG+ R       NSF SSP  A   SS  + +P+S  
Sbjct: 920  CKAAKEVIKSLTAQLKDMAERLPVGSARTVKSPSLNSFGSSPDYA-APSSNTLNRPNSRE 978

Query: 892  ----PLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASH-CEATTKNKNRTMKAEPAQG 946
                 LT      NG+++ +  +GS         + +A+H  EA  +   R+ ++EP   
Sbjct: 979  TDSDSLTTVPMFSNGTSTPVFDSGS--------YRQQANHAAEAINRISTRSKESEPRNE 1030

Query: 947  DEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSM- 1005
            +EWVEQDE GVYITL AL GG +DLKRVRFSRK+FSEKQAE+WWA NR RVY+QYNV + 
Sbjct: 1031 NEWVEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEKQAEEWWAENRGRVYEQYNVRIV 1090

Query: 1006 VDKSSVSIGREGLAH 1020
            VDKSSV +G E L H
Sbjct: 1091 VDKSSVGVGSEDLGH 1105


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1100

 Score = 1338 bits (3463), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 723/1036 (69%), Positives = 843/1036 (81%), Gaps = 34/1036 (3%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIY++RSLD+ICKDKDEAEVWF+GLKALISR H RK R ESRS
Sbjct: 79   PIFQRYPRPEKEYQSFSLIYDERSLDVICKDKDEAEVWFSGLKALISRCHQRKWRTESRS 138

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D   S A SPR +T+RSSPL SPF S  S QK+G + L LH+ YESPPKN +DKA SD  
Sbjct: 139  DGTPSEANSPRTYTRRSSPLHSPFSSNESFQKEGSNHLRLHSPYESPPKNGIDKAFSDMS 198

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LYA PPK   P +SA  SV+SLSSGG D   GH+KG+  D FRVSLSSA+SSSS GSGHD
Sbjct: 199  LYAVPPKGFFPPDSATMSVHSLSSGGLDTLHGHMKGMGMDAFRVSLSSAISSSSHGSGHD 258

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DGD+LGDVF+WGE  G+G+LGGG +R GS   +KMDS +PKA+ES +VLDVQ IACGG+H
Sbjct: 259  DGDTLGDVFMWGEGIGEGVLGGGNYRVGSSLEIKMDSLLPKALESTIVLDVQYIACGGQH 318

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            A LVTKQGE FSWGEE  GRLGHGVDS+V HPKLIDAL   N+ELVACGE+H+CAVTLSG
Sbjct: 319  AVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSG 378

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG  +  FG+LGHGNE+S W+PK++N  +EGIHVSS++CGP+HTAVVTSAGQLFTF
Sbjct: 379  DLYTWGKGD--FGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTF 436

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGDR SV  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK
Sbjct: 437  GDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 496

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+ RLGHGDKE +LVPTCVAALVEPNFCQV+CGHSLTVALTT+GHVYTMGSPV
Sbjct: 497  LFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPV 556

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+P A+GK+PTRVEGKL K+FVEEIACG YHVAVLTSRTEVYTWGKG+NGRLGHGD
Sbjct: 557  YGQLGNPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGD 616

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
             DDRN P+LVE+LKDKQVKSI CG++FTAA+CLHKW SG+DQSMCSGCR PFNFKRKRHN
Sbjct: 617  ADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPFNFKRKRHN 676

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+C++KKS+KA MAPNPNKPYRVCD CF KL KA ET  SSHS++SRR S+
Sbjct: 677  CYNCGLVFCHSCTNKKSLKACMAPNPNKPYRVCDRCFNKLKKAMETDPSSHSSLSRRESV 736

Query: 665  NQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG ++A++  E   +RS  Q    + +E +++V+S  SK+NKK EFN +R  P+P+G S
Sbjct: 737  NQG-SDAIDRDEKLDTRSDGQLARFSLLEPMRQVDS-RSKKNKKYEFNSSRVSPIPSGGS 794

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
               +LN +KS NP FGS+KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTLSGL +
Sbjct: 795  HRGSLNITKSFNPTFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLTT 854

Query: 783  PKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
             KIVVDD KRT    S+EV+ LR+QVE LTRK+QLQE+ELERTT QLKEALA+A EE+A+
Sbjct: 855  QKIVVDDTKRTNDNLSQEVVMLRSQVENLTRKAQLQEVELERTTEQLKEALAIASEESAR 914

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVR-----NSNSFHSSPTPAWDVSSAAIEQPS--- 890
            C+AAK+VIKSLTAQLKDMAE LPVG+ R     + NSF SSP      SS  +  P+   
Sbjct: 915  CKAAKEVIKSLTAQLKDMAERLPVGSARTIKSPSLNSFGSSPDYV-APSSNTLNCPNSRE 973

Query: 891  ----SPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASH-CEATTKNKNRTMKAEPAQ 945
                SP+T      NG+++ +  + S         + +A+H  +A  +   R+ ++EP  
Sbjct: 974  TDSESPMTVP-MFSNGTSTPVFDSAS--------YRQQANHAADAINRISTRSKESEPRN 1024

Query: 946  GDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSM 1005
             +EWVEQDE GVYITL AL GG +DLKRVRFSRK+FSEKQAE+WWA NR RVY+QYNV +
Sbjct: 1025 ENEWVEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEKQAEEWWAENRGRVYEQYNVRI 1084

Query: 1006 -VDKSSVSIGREGLAH 1020
             VDKSSV +G E L H
Sbjct: 1085 VVDKSSVGVGSEDLGH 1100


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score = 1321 bits (3419), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 719/1023 (70%), Positives = 829/1023 (81%), Gaps = 52/1023 (5%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIY++RSLD+ICKDKDEAEVWFTGLKALIS  H R  R ESRS
Sbjct: 83   PIFQRYPRPEKEYQSFSLIYSERSLDVICKDKDEAEVWFTGLKALISHCHQRNRRTESRS 142

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D   S A SPR +T+RSSPL SPF S  S QKDG + L +H+ +ESPPKN LDKA SD  
Sbjct: 143  DGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNHLRIHSPFESPPKNGLDKAFSDMA 202

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LYA PPK   PS+SA  SV+S   GGSD   GH++G+  D FRVS+SSAVSSSS GSGHD
Sbjct: 203  LYAVPPKGFYPSDSATISVHS---GGSDSMHGHMRGMGIDAFRVSMSSAVSSSSHGSGHD 259

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DGD+LGDVFIWGE  G+G+LGGG  R GS   +KMDS +PKA+ES +VLDVQNIACGG+H
Sbjct: 260  DGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDMKMDSLLPKALESTIVLDVQNIACGGQH 319

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            A LVTKQGE FSWGEE  GRLGHGVDS++  PKLIDAL   N+ELVACGE H+CAVTLSG
Sbjct: 320  AVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSG 379

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG  +  FG+LGHGNE+S W+PK++N  LEGIHVSS++CGP+HTAVVTSAGQLFTF
Sbjct: 380  DLYTWGKGD--FGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTF 437

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGD+ SV  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK
Sbjct: 438  GDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 497

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGHG+KE +LVPTCVAALVEPNFCQV+CGHSLTVALTT+GHVYTMGSPV
Sbjct: 498  LFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPV 557

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+  A+GKLP RVEGKL K+FVEEIACG YHVAVLTSRTEVYTWGKG+NGRLGHGD
Sbjct: 558  YGQLGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGD 617

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
             DDRN P+LVE+LKDKQVKSI CGT+FTAA+C+H+W SG+DQSMCSGCR PF+FKRKRHN
Sbjct: 618  VDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSFKRKRHN 677

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+C+SKKS+KA MAPNPNKPYRVCD CF KL K  ET  SSHS++SRRGS+
Sbjct: 678  CYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTMETDPSSHSSLSRRGSI 737

Query: 665  NQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG ++ ++  + F SRS  Q    + MES+++V+S   K+NKK EFN +R  P+P+G S
Sbjct: 738  NQG-SDPIDKDDKFDSRSDGQLARFSLMESMRQVDS-RYKKNKKYEFNSSRVSPIPSGSS 795

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
            Q  ALN +KS NPVFG++KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTLSGLA+
Sbjct: 796  QRGALNIAKSFNPVFGASKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLAT 855

Query: 783  PKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            PK VVDD KRT    S+EV+KLR+QVE LTRK+QLQE+ELERT +QLKEALA+A EET +
Sbjct: 856  PKFVVDDTKRTNDNLSQEVVKLRSQVESLTRKAQLQEVELERTAKQLKEALAIANEETTR 915

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNS------NSFHSSP--TPAWDVSSAAIEQPS 890
            C+AAK+VIKSLTAQLKDMAE LPVG+ R        NSF SSP     +++    + QP+
Sbjct: 916  CKAAKEVIKSLTAQLKDMAERLPVGSARTVKSPPSLNSFGSSPGRIDPFNI----LNQPN 971

Query: 891  SPLTFQGAIPNGSNSLILSNGS---DFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGD 947
            S    Q + PNG ++ + SNG+    FG+            EAT +  N           
Sbjct: 972  S----QESEPNGISTPMFSNGTMTPAFGNG-----------EATNEAHNEK--------- 1007

Query: 948  EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVD 1007
            EWVEQDE GVYITL AL GG +DLKRVRFSRK+FSEKQAEQWWA NR RVY+QYNV MVD
Sbjct: 1008 EWVEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEKQAEQWWADNRGRVYEQYNVRMVD 1067

Query: 1008 KSS 1010
            K+S
Sbjct: 1068 KAS 1070


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
            finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
            finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score = 1318 bits (3411), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 717/1028 (69%), Positives = 826/1028 (80%), Gaps = 52/1028 (5%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIY++RSLD+ICKDKDEAEVWFTGLKALIS  H R  R ESRS
Sbjct: 83   PIFQRYPRPEKEYQSFSLIYSERSLDVICKDKDEAEVWFTGLKALISHCHQRNRRTESRS 142

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D   S A SPR +T+RSSPL SPF S  S QKDG + L +H+ +ESPPKN LDKA SD  
Sbjct: 143  DGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNHLRIHSPFESPPKNGLDKAFSDMA 202

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            LYA PPK   PS+SA  SV+S   GGSD   GH++G+  D FRVS+SSAVSSSS GSGHD
Sbjct: 203  LYAVPPKGFYPSDSATISVHS---GGSDSMHGHMRGMGMDAFRVSMSSAVSSSSHGSGHD 259

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            DGD+LGDVFIWGE  G+G+LGGG  R GS   +KMDS +PKA+ES +VLDVQNIACGG+H
Sbjct: 260  DGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQH 319

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            A LVTKQGE FSWGEE  GRLGHGVDS++  PKLIDAL   N+ELVACGE H+CAVTLSG
Sbjct: 320  AVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSG 379

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG  +  FG+LGHGNE+S W+PK++N  LEGIHVSS++CGP+HTAVVTSAGQLFTF
Sbjct: 380  DLYTWGKGD--FGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTF 437

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            GDGTFGVLGHGD+ SV  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK
Sbjct: 438  GDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 497

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+GRLGHG+KE +LVPTCVAALVEPNFCQV+CGHSLTVALTT+GHVYTMGSPV
Sbjct: 498  LFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPV 557

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG+  A+GK P RVEGKL K+FVEEIACG YHVAVLTSRTEVYTWGKG+NGRLGHGD
Sbjct: 558  YGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGD 617

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
             DDRN P+LVE+LKDKQVKSI CGT+FTAA+C+H+W SG+DQSMCSGCR PF+FKRKRHN
Sbjct: 618  VDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSFKRKRHN 677

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCGLV+CH+C+SKKS+KA MAPNPNKPYRVCD CF KL K  ET  SSHS++SRRGS+
Sbjct: 678  CYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTMETDPSSHSSLSRRGSI 737

Query: 665  NQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            NQG ++ ++  + F SRS  Q    + MES+++V+S   K+NKK EFN +R  P+P+G S
Sbjct: 738  NQG-SDPIDKDDKFDSRSDGQLARFSLMESMRQVDS-RHKKNKKYEFNSSRVSPIPSGSS 795

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
            Q  ALN +KS NPVFG++KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTLSGLA+
Sbjct: 796  QRGALNIAKSFNPVFGASKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLAT 855

Query: 783  PKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            PK VVDD KRT    S+EV+KLR+QVE LTRK+QLQE+ELERTT+QLKEALA+  EET +
Sbjct: 856  PKFVVDDTKRTNDNLSQEVVKLRSQVESLTRKAQLQEVELERTTKQLKEALAITNEETTR 915

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNS------NSFHSSP--TPAWDVSSAAIEQPS 890
            C+AAK+VIKSLTAQLKDMAE LPVG+ R        NSF SSP     +++ + A  Q S
Sbjct: 916  CKAAKEVIKSLTAQLKDMAERLPVGSARTVKSPPSLNSFGSSPGRIDPFNILNQANSQES 975

Query: 891  SPLTFQGAIPNGSNSLILSNGS---DFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGD 947
                     PNG  + + SNG+    FG+            EAT + +N           
Sbjct: 976  E--------PNGITTPMFSNGTMTPAFGNG-----------EATNEARNE---------K 1007

Query: 948  EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVD 1007
            EWVEQDE GVYITL AL GG +DLKRVRFSRK+FSE QAEQWWA NR RVY+QYNV MVD
Sbjct: 1008 EWVEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEIQAEQWWADNRGRVYEQYNVRMVD 1067

Query: 1008 KSSVSIGR 1015
            K+S  + R
Sbjct: 1068 KASEDLPR 1075


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score = 1308 bits (3384), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 716/1019 (70%), Positives = 825/1019 (80%), Gaps = 21/1019 (2%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            IFQRYPRPEKE QSFSLI +DRSLD+ICKDKDEAEVWF GLK LIS SH RK R ESRSD
Sbjct: 84   IFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLISHSHQRKWRTESRSD 143

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
             +SS ATSPR +T+RSSPLSSPF S  S  KDG D   L + + SPPKN LDKA SD VL
Sbjct: 144  IISSGATSPRTYTRRSSPLSSPFSSNDSVHKDGSDHYRLRSPFGSPPKNALDKAFSDVVL 203

Query: 126  YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
            YA PPK   PS+S  GSV+S+SSG SD   GH +G+  D FRVS SSA+SSSS GSGHDD
Sbjct: 204  YAVPPKGFFPSDSNAGSVHSMSSGHSDNTNGHPRGIPMDAFRVSYSSAISSSSHGSGHDD 263

Query: 186  GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
            GD+LGDVFIWGE TG+GILGGG  R GS +  KMD  VPK +E AV LDVQNI+CGGRHA
Sbjct: 264  GDALGDVFIWGEGTGEGILGGGSSRVGSSSSAKMDYLVPKPLEFAVRLDVQNISCGGRHA 323

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            ALVTKQGE++SWGEE GGRLGHGVD DV+ PKLID+L ++N+ELVACGE+HTCAVTLSGD
Sbjct: 324  ALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGD 383

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +YTWG     FGLLGHGN++S W+PK+++GPLEGIHVSS+SCGPWHTA+VTSAGQLFTFG
Sbjct: 384  LYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFG 443

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG+FGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGK+
Sbjct: 444  DGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 503

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            FTWGDGD+GRLGHGDK++R VPTCVAALVEPNFCQV+CGH LTVALTT+GHVYTMGS VY
Sbjct: 504  FTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVY 563

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            GQLG+P+A+G LP RVEGKL KNFVEEI+CG YHVAVLTSRTEVYTWGKGANGRLGHG T
Sbjct: 564  GQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGT 623

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            DD+N P+LVEALKDKQV+S+VCG +FTAAIC+HKWVSG DQSMCSGCR PFN +RKRHNC
Sbjct: 624  DDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGSDQSMCSGCRQPFNLRRKRHNC 683

Query: 606  YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
            YNC LV+CH+CSSKKS+KAS+APNPNKPYRVCD+C+ KLTK  ET ++S    ++RG++ 
Sbjct: 684  YNCALVFCHSCSSKKSLKASLAPNPNKPYRVCDSCYSKLTKGLETDTNSS---TKRGTVV 740

Query: 666  QGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
            QGF+E  E  E   +RS+ Q    +SMES K ++S  SK+NKK EFN TR  P+PNG S 
Sbjct: 741  QGFSETNE--EELETRSNTQLSRLSSMESFKNMDSRYSKKNKKFEFNSTRVSPVPNGSSH 798

Query: 724  GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
             + LN S+S NPVFGS+KKFFSAS+PGSRI+SRATSP SRR+SPPR+TTPTPTL GL SP
Sbjct: 799  WSGLNISRSFNPVFGSSKKFFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLGGLTSP 858

Query: 784  KIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKC 839
            +++ +DAK T    S EV+ LR+QVE LTRKS L E+ELERTT+QLKEA+ +AGEETAKC
Sbjct: 859  RVIANDAKPTNDSLSHEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEETAKC 918

Query: 840  RAAKDVIKSLTAQLKDMAEMLPVGAVRNSN--SFHSSPTPAWDVSSAAIEQPSSPLTFQG 897
            +AAK+VIKSLTAQLK MAE LP G  +NS        P P+ ++SS A E   SP +   
Sbjct: 919  KAAKEVIKSLTAQLKGMAERLPGGVTKNSKLPPLSGFPMPS-ELSSMATESLGSPSSVGE 977

Query: 898  AIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGV 957
             I NG N L+ SNG       S  + +A H E   KN +R  +AE     EWVEQDE GV
Sbjct: 978  QISNGPNGLLASNGP------SSVRIKAGHPE-VGKNGSRLPEAESCHEAEWVEQDEPGV 1030

Query: 958  YITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIGRE 1016
            YITL ALPGG +DLKRVRFSRK+FSE QAEQWW  NR RVYQ YNV MV+KS+ SI  E
Sbjct: 1031 YITLTALPGGARDLKRVRFSRKRFSETQAEQWWQENRTRVYQHYNVRMVEKSASSIDNE 1089


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score = 1306 bits (3381), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 716/1019 (70%), Positives = 825/1019 (80%), Gaps = 21/1019 (2%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            IFQRYPRPEKE QSFSLI +DRSLD+ICKDKDEAEVWF GLK LIS SH RK R ESRSD
Sbjct: 84   IFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLISHSHQRKWRTESRSD 143

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
             +SS ATSPR +T+RSSPLSSPF S  S  KDG D   L + + SPPKN LDKA SD VL
Sbjct: 144  IISSGATSPRTYTRRSSPLSSPFSSNDSVHKDGSDHYRLRSPFGSPPKNALDKAFSDVVL 203

Query: 126  YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
            YA PPK   PS+S  GSV+S+SSG SD   GH +G+  D FRVS SSA+SSSS GSGHDD
Sbjct: 204  YAVPPKGFFPSDSNAGSVHSMSSGHSDNTNGHPRGIPMDAFRVSYSSAISSSSHGSGHDD 263

Query: 186  GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
            GD+LGDVFIWGE TG+GILGGG  R GS +  KMD  VPK +E AV LDVQNI+CGGRHA
Sbjct: 264  GDALGDVFIWGEGTGEGILGGGSSRVGSSSSAKMDYLVPKPLEFAVRLDVQNISCGGRHA 323

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            ALVTKQGE++SWGEE GGRLGHGVD DV+ PKLID+L ++N+ELVACGE+HTCAVTLSGD
Sbjct: 324  ALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGD 383

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +YTWG     FGLLGHGN++S W+PK+++GPLEGIHVSS+SCGPWHTA+VTSAGQLFTFG
Sbjct: 384  LYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFG 443

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG+FGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGK+
Sbjct: 444  DGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 503

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            FTWGDGD+GRLGHGDK++R VPTCVAALVEPNFCQV+CGH LTVALTT+GHVYTMGS VY
Sbjct: 504  FTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVY 563

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            GQLG+P+A+G LP RVEGKL KNFVEEI+CG YHVAVLTSRTEVYTWGKGANGRLGHG T
Sbjct: 564  GQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGT 623

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            DD+N P+LVEALKDKQV+S+VCG +FTAAIC+HKWVSG DQSMCSGCR PFN +RKRHNC
Sbjct: 624  DDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGSDQSMCSGCRQPFNLRRKRHNC 683

Query: 606  YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
            YNC LV+CH+CSSKKS+KAS+APNPNKPYRVCD+C+ KLTK  ET ++S    ++RG++ 
Sbjct: 684  YNCALVFCHSCSSKKSLKASLAPNPNKPYRVCDSCYSKLTKGLETDTNSS---TKRGTVV 740

Query: 666  QGFNEAVEHGENFVSRSHVQF--GTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
            QGF+E  E  E   +RS+ Q    +SMES K ++S  SK+NKK EFN TR  P+PNG S 
Sbjct: 741  QGFSETNE--EELETRSNTQLLRLSSMESFKNMDSRYSKKNKKFEFNSTRVSPVPNGSSH 798

Query: 724  GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
             + LN S+S NPVFGS+KKFFSAS+PGSRI+SRATSP SRR+SPPR+TTPTPTL GL SP
Sbjct: 799  WSGLNISRSFNPVFGSSKKFFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLGGLTSP 858

Query: 784  KIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKC 839
            +++ +DAK T    S EV+ LR+QVE LTRKS L E+ELERTT+QLKEA+ +AGEETAKC
Sbjct: 859  RVIANDAKPTNDSLSHEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEETAKC 918

Query: 840  RAAKDVIKSLTAQLKDMAEMLPVGAVRNSN--SFHSSPTPAWDVSSAAIEQPSSPLTFQG 897
            +AAK+VIKSLTAQLK MAE LP G  +NS        P P+ ++SS A E   SP +   
Sbjct: 919  KAAKEVIKSLTAQLKGMAERLPGGVTKNSKLPPLSGFPMPS-ELSSMATESLGSPSSVGE 977

Query: 898  AIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGV 957
             I NG N L+ SNG       S  + +A H E   KN +R  +AE     EWVEQDE GV
Sbjct: 978  QISNGPNGLLASNGP------SSVRIKAGHPE-VGKNGSRLPEAESCHEAEWVEQDEPGV 1030

Query: 958  YITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIGRE 1016
            YITL ALPGG +DLKRVRFSRK+FSE QAEQWW  NR RVYQ YNV MV+KS+ SI  E
Sbjct: 1031 YITLTALPGGARDLKRVRFSRKRFSETQAEQWWQENRTRVYQHYNVRMVEKSASSIDNE 1089


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score = 1302 bits (3370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 713/1013 (70%), Positives = 822/1013 (81%), Gaps = 21/1013 (2%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            IFQRYPRPEKE QSFSLI +DRSLD+ICKDKDEAEVWF GLK LIS SH RK R ESRSD
Sbjct: 84   IFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLISHSHQRKWRTESRSD 143

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
             +SS ATSPR +T+RSSPLSSPF S  S  KDG D   L + + SPPKN LDKA SD VL
Sbjct: 144  IISSGATSPRTYTRRSSPLSSPFSSNDSVHKDGSDHYRLRSPFGSPPKNALDKAFSDVVL 203

Query: 126  YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
            YA PPK   PS+S  GSV+S+SSG SD   GH +G+  D FRVS SSA+SSSS GSGHDD
Sbjct: 204  YAVPPKGFFPSDSNAGSVHSMSSGHSDNTNGHPRGIPMDAFRVSYSSAISSSSHGSGHDD 263

Query: 186  GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
            GD+LGDVFIWGE TG+GILGGG  R GS +  KMD  VPK +E AV LDVQNI+CGGRHA
Sbjct: 264  GDALGDVFIWGEGTGEGILGGGSSRVGSSSSAKMDYLVPKPLEFAVRLDVQNISCGGRHA 323

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            ALVTKQGE++SWGEE GGRLGHGVD DV+ PKLID+L ++N+ELVACGE+HTCAVTLSGD
Sbjct: 324  ALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGD 383

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +YTWG     FGLLGHGN++S W+PK+++GPLEGIHVSS+SCGPWHTA+VTSAGQLFTFG
Sbjct: 384  LYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFG 443

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG+FGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGK+
Sbjct: 444  DGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 503

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            FTWGDGD+GRLGHGDK++R VPTCVAALVEPNFCQV+CGH LTVALTT+GHVYTMGS VY
Sbjct: 504  FTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVY 563

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            GQLG+P+A+G LP RVEGKL KNFVEEI+CG YHVAVLTSRTEVYTWGKGANGRLGHG T
Sbjct: 564  GQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGT 623

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            DD+N P+LVEALKDKQV+S+VCG +FTAAIC+HKWVSG DQSMCSGCR PFN +RKRHNC
Sbjct: 624  DDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGSDQSMCSGCRQPFNLRRKRHNC 683

Query: 606  YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
            YNC LV+CH+CSSKKS+KAS+APNPNKPYRVCD+C+ KLTK  ET ++S    ++RG++ 
Sbjct: 684  YNCALVFCHSCSSKKSLKASLAPNPNKPYRVCDSCYSKLTKGLETDTNSS---TKRGTVV 740

Query: 666  QGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
            QGF+E  E  E   +RS+ Q    +SMES K ++S  SK+NKK EFN TR  P+PNG S 
Sbjct: 741  QGFSETNE--EELETRSNTQLSRLSSMESFKNMDSRYSKKNKKFEFNSTRVSPVPNGSSH 798

Query: 724  GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
             + LN S+S NPVFGS+KKFFSAS+PGSRI+SRATSP SRR+SPPR+TTPTPTL GL SP
Sbjct: 799  WSGLNISRSFNPVFGSSKKFFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLGGLTSP 858

Query: 784  KIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKC 839
            +++ +DAK T    S EV+ LR+QVE LTRKS L E+ELERTT+QLKEA+ +AGEETAKC
Sbjct: 859  RVIANDAKPTNDSLSHEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEETAKC 918

Query: 840  RAAKDVIKSLTAQLKDMAEMLPVGAVRNSN--SFHSSPTPAWDVSSAAIEQPSSPLTFQG 897
            +AAK+VIKSLTAQLK MAE LP G  +NS        P P+ ++SS A E   SP +   
Sbjct: 919  KAAKEVIKSLTAQLKGMAERLPGGVTKNSKLPPLSGFPMPS-ELSSMATESLGSPSSVGE 977

Query: 898  AIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGV 957
             I NG N L+ SNG       S  + +A H E   KN +R  +AE     EWVEQDE GV
Sbjct: 978  QISNGPNGLLASNGP------SSVRIKAGHPE-VGKNGSRLPEAESCHEAEWVEQDEPGV 1030

Query: 958  YITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSS 1010
            YITL ALPGG +DLKRVRFSRK+FSE QAEQWW  NR RVYQ YNV MV+KS+
Sbjct: 1031 YITLTALPGGARDLKRVRFSRKRFSETQAEQWWQENRTRVYQHYNVRMVEKSA 1083


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score = 1299 bits (3362), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 714/1019 (70%), Positives = 823/1019 (80%), Gaps = 23/1019 (2%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            IFQRYPRPEKE QSFSLI +DRSLD+ICKDKDEAEVWF GLK LIS SH RK R ESRSD
Sbjct: 84   IFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLISHSHQRKWRTESRSD 143

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
             +SS ATSPR +T+RSSPLSSPF S  S  KDG D   L + + SPPKN LDKA SD VL
Sbjct: 144  IISSGATSPRTYTRRSSPLSSPFSSNDSVHKDGSDHYRLRSPFGSPPKNALDKAFSDVVL 203

Query: 126  YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
            YA PPK   PS+S  GSV+S+SSG SD   GH +G+  D FRVS SSA+SSSS GSGHDD
Sbjct: 204  YAVPPKGFFPSDSNAGSVHSMSSGHSDNTNGHPRGIPMDAFRVSYSSAISSSSHGSGHDD 263

Query: 186  GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
            GD+LGDVFIWGE TG+GILGGG  R GS +  KMD  VPK +E AV LDVQNI+CGGRHA
Sbjct: 264  GDALGDVFIWGEGTGEGILGGGSSRVGSSSSAKMDYLVPKPLEFAVRLDVQNISCGGRHA 323

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            ALVTKQGE++SWGEE GGRLGHGVD DV+ PKLID+L ++N+ELVACGE+HTCAVTLSGD
Sbjct: 324  ALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGD 383

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +YTWG     FGLLGHGN++S W+PK+++GPLEGIHVSS+SCGPWHTA+VTSAGQLFTFG
Sbjct: 384  LYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFG 443

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG+FGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGK+
Sbjct: 444  DGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 503

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            FTWGDGD+GRLGHGDK++R VPTCVAALVEPNFCQV+CGH LTVALTT+GHVYTMGS VY
Sbjct: 504  FTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVY 563

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            GQLG+P+A+G LP RVEGKL KNFVEEI+CG YHVAVLTSRTEVYTWGKGANGRLGHG T
Sbjct: 564  GQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGT 623

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            DD+N P+LVEALKDKQV+S+VCG +FTAAIC+HKWVSG DQSMCSGCR PFN +RKRHNC
Sbjct: 624  DDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGSDQSMCSGCRQPFNLRRKRHNC 683

Query: 606  YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
            YNC LV+CH+CSSKKS+KAS+APNPNKPYRVCD+C+ KLTK  ET ++S    ++RG++ 
Sbjct: 684  YNCALVFCHSCSSKKSLKASLAPNPNKPYRVCDSCYSKLTKGLETDTNSS---TKRGTVV 740

Query: 666  QGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
            QGF+E  E  E   +RS+ Q    +SMES K ++S  SK+NKK EFN TR  P+PNG S 
Sbjct: 741  QGFSETNE--EELETRSNTQLSRLSSMESFKNMDSRYSKKNKKFEFNSTRVSPVPNGSSH 798

Query: 724  GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
             + LN S+S NPVFGS+KKFFSAS+PGSRI+SRATSP SRR+SPPR+TTPTPTL GL SP
Sbjct: 799  WSGLNISRSFNPVFGSSKKFFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLGGLTSP 858

Query: 784  KIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKC 839
            +++ +DAK T    S EV+ LR+QVE LTRKS L E+ELERTT+QLKEA+ +AGEETAKC
Sbjct: 859  RVIANDAKPTNDSLSHEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEETAKC 918

Query: 840  RAAKDVIKSLTAQLKDMAEMLPVGAVRNSN--SFHSSPTPAWDVSSAAIEQPSSPLTFQG 897
            +AAK+VIKSLTAQ   MAE LP G  +NS        P P+ ++SS A E   SP +   
Sbjct: 919  KAAKEVIKSLTAQ--GMAERLPGGVTKNSKLPPLSGFPMPS-ELSSMATESLGSPSSVGE 975

Query: 898  AIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGV 957
             I NG N L+ SNG       S  + +A H E   KN +R  +AE     EWVEQDE GV
Sbjct: 976  QISNGPNGLLASNGP------SSVRIKAGHPE-VGKNGSRLPEAESCHEAEWVEQDEPGV 1028

Query: 958  YITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIGRE 1016
            YITL ALPGG +DLKRVRFSRK+FSE QAEQWW  NR RVYQ YNV MV+KS+ SI  E
Sbjct: 1029 YITLTALPGGARDLKRVRFSRKRFSETQAEQWWQENRTRVYQHYNVRMVEKSASSIDNE 1087


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score = 1296 bits (3354), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 710/1024 (69%), Positives = 819/1024 (79%), Gaps = 55/1024 (5%)

Query: 9    RYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDEVS 68
            RYPRPEKEYQSFSLIY++RSLD+   DKDEAEVWFTGLKALIS  H R  R ESRSD   
Sbjct: 77   RYPRPEKEYQSFSLIYSERSLDV---DKDEAEVWFTGLKALISHCHQRNRRTESRSDGTP 133

Query: 69   SVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVLYAA 128
            S A SPR +T+RSSPL SPF S  S QKDG + L +H+ +ESPPKN LDKA SD  LYA 
Sbjct: 134  SEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNHLRIHSPFESPPKNGLDKAFSDMALYAV 193

Query: 129  PPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDS 188
            PPK   PS+SA  SV+S   GGSD   GH++G+  D FRVS+SSAVSSSS GSGHDDGD+
Sbjct: 194  PPKGFYPSDSATISVHS---GGSDSMHGHMRGMGMDAFRVSMSSAVSSSSHGSGHDDGDA 250

Query: 189  LGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            LGDVFIWGE  G+G+LGGG  R GS   +KMDS +PKA+ES +VLDVQNIACGG+HA LV
Sbjct: 251  LGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLV 310

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            TKQGE FSWGEE  GRLGHGVDS++  PKLIDAL   N+ELVACGE H+CAVTLSGD+YT
Sbjct: 311  TKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYT 370

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +  FG+LGHGNE+S W+PK++N  LEGIHVSS++CGP+HTAVVTSAGQLFTFGDGT
Sbjct: 371  WGKGD--FGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGT 428

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            FGVLGHGD+ SV  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW
Sbjct: 429  FGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 488

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD+GRLGHG+KE +LVPTCVAALVEPNFCQV+CGHSLTVALTT+GHVYTMGSPVYGQL
Sbjct: 489  GDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQL 548

Query: 489  GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
            G+  A+GK P RVEGKL K+FVEEIACG YHVAVLTSRTEVYTWGKG+NGRLGHGD DDR
Sbjct: 549  GNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDR 608

Query: 549  NFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNC 608
            N P+LVE+LKDKQVKSI CGT+FTAA+C+H+W SG+DQSMCSGCR PF+FKRKRHNCYNC
Sbjct: 609  NSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSFKRKRHNCYNC 668

Query: 609  GLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGF 668
            GLV+CH+C+SKKS+KA MAPNPNKPYRVCD CF KL K  ET  SSHS++SRRGS+NQG 
Sbjct: 669  GLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTMETDPSSHSSLSRRGSINQG- 727

Query: 669  NEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNA 726
            ++ ++  + F SRS  Q    + MES+++V+S   K+NKK EFN +R  P+P+G SQ  A
Sbjct: 728  SDPIDKDDKFDSRSDGQLARFSLMESMRQVDS-RHKKNKKYEFNSSRVSPIPSGSSQRGA 786

Query: 727  LNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIV 786
            LN +KS NPVFG++KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTLSGLA+PK V
Sbjct: 787  LNIAKSFNPVFGASKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLATPKFV 846

Query: 787  VDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAA 842
            VDD KRT    S+EV+KLR+QVE LTRK+QLQE+ELERTT+QLKEALA+  EET +C+AA
Sbjct: 847  VDDTKRTNDNLSQEVVKLRSQVESLTRKAQLQEVELERTTKQLKEALAITNEETTRCKAA 906

Query: 843  KDVIKSLTAQLKDMAEMLPVGAVRNS------NSFHSSP--TPAWDVSSAAIEQPSSPLT 894
            K+VIKSLTAQLKDMAE LPVG+ R        NSF SSP     +++ + A  Q S    
Sbjct: 907  KEVIKSLTAQLKDMAERLPVGSARTVKSPPSLNSFGSSPGRIDPFNILNQANSQESE--- 963

Query: 895  FQGAIPNGSNSLILSNGS---DFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVE 951
                 PNG  + + SNG+    FG+            EAT + +N           EWVE
Sbjct: 964  -----PNGITTPMFSNGTMTPAFGNG-----------EATNEARNEK---------EWVE 998

Query: 952  QDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSV 1011
            QDE GVYITL AL GG +DLKRVRFSRK+FSE QAEQWWA NR RVY+QYNV MVDK+S 
Sbjct: 999  QDEPGVYITLTALAGGARDLKRVRFSRKRFSEIQAEQWWADNRGRVYEQYNVRMVDKASE 1058

Query: 1012 SIGR 1015
             + R
Sbjct: 1059 DLPR 1062


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
            [Zea mays]
          Length = 1131

 Score = 1290 bits (3339), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 714/1023 (69%), Positives = 820/1023 (80%), Gaps = 25/1023 (2%)

Query: 1    MLLQPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRA 60
             ++Q IFQRYPRPEKE QSFSLI +DRSLD+ICKDKDEAEVWF GLK LISR H RK R 
Sbjct: 117  FIIQSIFQRYPRPEKECQSFSLISHDRSLDVICKDKDEAEVWFAGLKTLISRCHQRKWRT 176

Query: 61   ESRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKAL 120
            ESRSD +SS ATSPR +T+RSSPLSSPF S  S  KDG D   L T Y SPPKN L+KA 
Sbjct: 177  ESRSDLLSSGATSPRTYTRRSSPLSSPFSSNDSIHKDGSDNYRLRTPYGSPPKNGLEKAF 236

Query: 121  SDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQG 180
            SD +LYA PP+   PS+S  GSV+S+SSG SD   GH +G+  D FR S SSAVSSSS G
Sbjct: 237  SDVMLYAVPPRGFFPSDSNAGSVHSMSSGHSDNTNGHPRGVPMDAFRASYSSAVSSSSHG 296

Query: 181  SGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
            SGHDDGD+LGDVFIWGE TG+GILGGG  R GS +G KMD  VPK +E AV LDVQNI+C
Sbjct: 297  SGHDDGDALGDVFIWGEGTGEGILGGGGSRVGSSSGAKMDCLVPKPLEFAVRLDVQNISC 356

Query: 241  GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
            GGRHAALVTKQGE++SWGEE GGRLGHGVD DVS PKLIDAL ++N+ELVACGE+HTCAV
Sbjct: 357  GGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAV 416

Query: 301  TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            TLSGD+YTWG     FGLLGHGN++S W+PK +NGPLEGIHVSS+SCGPWHTAVVTSAGQ
Sbjct: 417  TLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEGIHVSSISCGPWHTAVVTSAGQ 476

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
            LFTFGDG+FGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEVM G+SSSSNC
Sbjct: 477  LFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNC 536

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            SSGK+FTWGDGD+GRLGHGDK  +LVPTCVAALVEPNFCQV+CGH LTVALTT+GHVYTM
Sbjct: 537  SSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTM 596

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            GS VYGQLG+ +A+G LP RVEGKL KNFVEEI+CG YHVAVLTS+TEVYTWGKGANGRL
Sbjct: 597  GSAVYGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRL 656

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKR 600
            GHGDTDD+N P+LVEALKDKQV+ +VCG +FTAAIC+HKWVSGVDQSMCSGCR PFN +R
Sbjct: 657  GHGDTDDKNTPTLVEALKDKQVRIVVCGINFTAAICIHKWVSGVDQSMCSGCRQPFNLRR 716

Query: 601  KRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSR 660
            KRHNCYNC LV+CH+CSSKKS+KAS+APN NKPYRVCD C+ KLTK  ET    HS+ ++
Sbjct: 717  KRHNCYNCALVFCHSCSSKKSLKASLAPNTNKPYRVCDTCYSKLTKGLET--DMHSS-AK 773

Query: 661  RGSMNQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLP 718
            R +   G ++A E  E+  +RS+ Q    +SMES K ++S  SK+NKK EFN TR  P+P
Sbjct: 774  RAATVPGVSDANE--EDLETRSNAQLSRLSSMESFKHLDSRYSKKNKKFEFNSTRVSPVP 831

Query: 719  NGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLS 778
            NG S  + LN S+S NPVFGS+KKFFSAS+PGSRI+SRATSP SRR+SPPR+TTPTPTL 
Sbjct: 832  NGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRASPPRSTTPTPTLG 891

Query: 779  GLASPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGE 834
            GL SP++V +D K T    S+EV+ LR+QVE L RKSQL E+ELERTT+QLKEA+++AGE
Sbjct: 892  GLTSPRVVPNDGKPTNDALSQEVLNLRSQVESLARKSQLLEVELERTTKQLKEAISIAGE 951

Query: 835  ETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAW----DVSSAAIEQPS 890
            ETAKC+AAK+VIKSLTAQLK MAE LP GA +N+      P P      D+ S   E   
Sbjct: 952  ETAKCKAAKEVIKSLTAQLKGMAERLPGGAAKNTK---LPPLPGIFIPSDIPSMPTESEG 1008

Query: 891  SPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWV 950
            SP +    I NG N L+ SNG      +S  + + SH E   KN  R   AE     EWV
Sbjct: 1009 SPSSSGEQIINGHNGLLTSNG------QSSIRNKTSHPE-VGKNGGRLPDAESCHDAEWV 1061

Query: 951  EQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSS 1010
            EQDE GVYITL ALPGG +DLKRVRFSRK+FSE QAEQWW  NRARVYQQYNV ++DKS+
Sbjct: 1062 EQDEPGVYITLTALPGGARDLKRVRFSRKRFSETQAEQWWQQNRARVYQQYNVRVIDKST 1121

Query: 1011 VSI 1013
             S+
Sbjct: 1122 ASV 1124


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score = 1286 bits (3328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 707/1017 (69%), Positives = 819/1017 (80%), Gaps = 28/1017 (2%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            IFQRYPRPEKE QSFSLI +DRSLD+ICKDKDEAEVWF GLK LI+RSH RK R ESRSD
Sbjct: 129  IFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLITRSHQRKWRTESRSD 188

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
             +SS  TSPR +T+RSSPLSSPF S  S  KDG++   L + + SPPK  L+KA SD V 
Sbjct: 189  MLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGVENYRLRSPFGSPPKVGLEKAFSDIVS 248

Query: 126  YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
            YAAPPK   PS+S  GSV+S+SSG SD    H +G+  D FRVSLSSAVSSSS GSGHDD
Sbjct: 249  YAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLHSRGIPMDAFRVSLSSAVSSSSHGSGHDD 308

Query: 186  GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
            GD+LGDVFIWGE TG+GILGGG  R G+ +GV MD  +PK +E AV LDVQNI+CGGRHA
Sbjct: 309  GDALGDVFIWGEGTGEGILGGGNSRVGNSSGVNMDCLIPKPLEFAVKLDVQNISCGGRHA 368

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
             LVTKQGE++SWGEE GGRLGHGVD DV  PKLIDAL N+N+ELVACGE+HTCAVTLSGD
Sbjct: 369  TLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGD 428

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +YTWG    N GLLGHGNE+S W+PK++NGPLEGIHVS++SCGPWHTA+VTSAGQLFTFG
Sbjct: 429  LYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFG 488

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG+FGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGK+
Sbjct: 489  DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 548

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            FTWGDGD+GRLGHGDK+ RLVPTCVAALVEPNFCQ++CGH +TVALTT+GHVYTMGSPVY
Sbjct: 549  FTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVY 608

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            GQLG+P+A+G LP RVEGKL KNFVEEI+CG YHVAVLTSRTEVYTWGKGANGRLGHGDT
Sbjct: 609  GQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 668

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            DDR+ P+LVEALKDKQV+++VCG +FTAAIC+HKWVSGVDQSMCSGCR+PFN +RKRHNC
Sbjct: 669  DDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNC 728

Query: 606  YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
            YNC LV+CH CSSKKS+KAS+APNPNKPYRVCD+C+ KL K  ET   S    ++RGS+ 
Sbjct: 729  YNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSS---AKRGSVI 785

Query: 666  QGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
            QGFN++V+  E   ++S+ Q    +S+ES K ++S +SK+NKK EFN +R  P+PNG S 
Sbjct: 786  QGFNDSVD--EELETKSNAQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNGSSH 843

Query: 724  GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
             + LN SKS    FGS+KKFFSAS+PGSRI+SRATSP SRR+SPPR+TTPTPTL GL SP
Sbjct: 844  WSGLNISKS----FGSSKKFFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSP 899

Query: 784  KIV--VDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRA 841
            ++V  V      S+EV+ LR+QVE LTRKSQL E +LERTT+QLKEA+++AGEETAKC+A
Sbjct: 900  RVVDGVKPNDSISQEVLSLRSQVENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKA 959

Query: 842  AKDVIKSLTAQLKDMAEMLPVGA--VRNSNSFHSSPTPAWDVS---SAAIEQPSSPLTFQ 896
            AK+VIKSLTAQLK MAE LP GA  V+NS      P P   +    S A E   SP +  
Sbjct: 960  AKEVIKSLTAQLKGMAEKLPEGAGLVKNS---RLPPLPGISIPTDISVASESLGSPRSSG 1016

Query: 897  GAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETG 956
                NGSN L++SNG     N+       SH E   KN  R   ++     EWVEQDE G
Sbjct: 1017 EPCSNGSNGLLVSNGPTSVRNK------LSHPE-IPKNGTRLPDSDSKHESEWVEQDEPG 1069

Query: 957  VYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSI 1013
            VYITL ALPGG +DLKRVRFSRK+FSE QAEQWW  NRARVY+QYNV +VDKS  SI
Sbjct: 1070 VYITLTALPGGTRDLKRVRFSRKRFSETQAEQWWQENRARVYEQYNVRVVDKSVGSI 1126


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score = 1285 bits (3326), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 707/1017 (69%), Positives = 819/1017 (80%), Gaps = 28/1017 (2%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            IFQRYPRPEKE QSFSLI +DRSLD+ICKDKDEAEVWF GLK LI+RSH RK R ESRSD
Sbjct: 83   IFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLITRSHQRKWRTESRSD 142

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
             +SS  TSPR +T+RSSPLSSPF S  S  KDG++   L + + SPPK  L+KA SD V 
Sbjct: 143  MLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGVENYRLRSPFGSPPKVGLEKAFSDIVS 202

Query: 126  YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
            YAAPPK   PS+S  GSV+S+SSG SD    H +G+  D FRVSLSSAVSSSS GSGHDD
Sbjct: 203  YAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLHSRGIPMDAFRVSLSSAVSSSSHGSGHDD 262

Query: 186  GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
            GD+LGDVFIWGE TG+GILGGG  R G+ +GV MD  +PK +E AV LDVQNI+CGGRHA
Sbjct: 263  GDALGDVFIWGEGTGEGILGGGNSRVGNSSGVNMDCLIPKPLEFAVKLDVQNISCGGRHA 322

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
             LVTKQGE++SWGEE GGRLGHGVD DV  PKLIDAL N+N+ELVACGE+HTCAVTLSGD
Sbjct: 323  TLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGD 382

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +YTWG    N GLLGHGNE+S W+PK++NGPLEGIHVS++SCGPWHTA+VTSAGQLFTFG
Sbjct: 383  LYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFG 442

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG+FGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGK+
Sbjct: 443  DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 502

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            FTWGDGD+GRLGHGDK+ RLVPTCVAALVEPNFCQ++CGH +TVALTT+GHVYTMGSPVY
Sbjct: 503  FTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVY 562

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            GQLG+P+A+G LP RVEGKL KNFVEEI+CG YHVAVLTSRTEVYTWGKGANGRLGHGDT
Sbjct: 563  GQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 622

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            DDR+ P+LVEALKDKQV+++VCG +FTAAIC+HKWVSGVDQSMCSGCR+PFN +RKRHNC
Sbjct: 623  DDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNC 682

Query: 606  YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
            YNC LV+CH CSSKKS+KAS+APNPNKPYRVCD+C+ KL K  ET   S    ++RGS+ 
Sbjct: 683  YNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSS---AKRGSVI 739

Query: 666  QGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
            QGFN++V+  E   ++S+ Q    +S+ES K ++S +SK+NKK EFN +R  P+PNG S 
Sbjct: 740  QGFNDSVD--EELETKSNAQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNGSSH 797

Query: 724  GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
             + LN SKS    FGS+KKFFSAS+PGSRI+SRATSP SRR+SPPR+TTPTPTL GL SP
Sbjct: 798  WSGLNISKS----FGSSKKFFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSP 853

Query: 784  KIV--VDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRA 841
            ++V  V      S+EV+ LR+QVE LTRKSQL E +LERTT+QLKEA+++AGEETAKC+A
Sbjct: 854  RVVDGVKPNDSISQEVLSLRSQVENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKA 913

Query: 842  AKDVIKSLTAQLKDMAEMLPVGA--VRNSNSFHSSPTPAWDVS---SAAIEQPSSPLTFQ 896
            AK+VIKSLTAQLK MAE LP GA  V+NS      P P   +    S A E   SP +  
Sbjct: 914  AKEVIKSLTAQLKGMAEKLPEGAGLVKNS---RLPPLPGISIPTDISVASESLGSPRSSG 970

Query: 897  GAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETG 956
                NGSN L++SNG     N+       SH E   KN  R   ++     EWVEQDE G
Sbjct: 971  EPCSNGSNGLLVSNGPTSVRNK------LSHPE-IPKNGTRLPDSDSKHESEWVEQDEPG 1023

Query: 957  VYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSI 1013
            VYITL ALPGG +DLKRVRFSRK+FSE QAEQWW  NRARVY+QYNV +VDKS  SI
Sbjct: 1024 VYITLTALPGGTRDLKRVRFSRKRFSETQAEQWWQENRARVYEQYNVRVVDKSVGSI 1080


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
            distachyon]
          Length = 1092

 Score = 1280 bits (3312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 702/1013 (69%), Positives = 821/1013 (81%), Gaps = 21/1013 (2%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            IFQRYPRPEKE QSFSLI  DRSLD+ICKDKDEAEVWF GLK LISRSH RK R ESRSD
Sbjct: 86   IFQRYPRPEKECQSFSLISQDRSLDIICKDKDEAEVWFAGLKTLISRSHQRKWRTESRSD 145

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
             +SS ATSPR +T+RSSPLSSPF S  S  KDG +     + Y SP KN LDKA SD VL
Sbjct: 146  TISSAATSPRIYTRRSSPLSSPFSSNDSLHKDGNENYRFRSPYGSPQKNGLDKAFSDVVL 205

Query: 126  YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
            YA PPK   PS+S   SV+S+SSG SD   GH +G+  D FR S SSAVSSSS GSG+DD
Sbjct: 206  YAVPPKSFFPSDSNARSVHSMSSGHSDNTNGHPRGIQMDPFRASYSSAVSSSSYGSGYDD 265

Query: 186  GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
            GD+LGDV IWGE TG+GILGGG  R GS +G KMD  VPK +E AV LDVQNI+CGG+HA
Sbjct: 266  GDALGDVLIWGEGTGEGILGGGSSRIGSSSGAKMDCLVPKPLEFAVRLDVQNISCGGKHA 325

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            ALV+KQGE++SWGEE GGRLGHGVD DV+HPKLIDAL ++N+ELVACGE+HTCAVTLSGD
Sbjct: 326  ALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTCAVTLSGD 385

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +YTWG     FGLLGHGN++S W+PKKL+GPLEGIHVSS+SCGP+HT +VTSAGQLFTFG
Sbjct: 386  LYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEGIHVSSISCGPFHTVIVTSAGQLFTFG 445

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG+FGVLGHGDR S+S P+EV+SLKGLRTVRAACGVWHTAAVVEVM G+SSSSNCSSGK+
Sbjct: 446  DGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKI 505

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            FTWGDGD+GRLGHGDKE+RLVPTCVAALVEPNFCQV+CGH LTVALTT+GHVYTMGS VY
Sbjct: 506  FTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVY 565

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            GQLG+P+A+G LP RVEGKL KNFVEEI+CG YHVAVLTSRTEVYTWGKGANGRLGHG+T
Sbjct: 566  GQLGNPQADGMLPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNT 625

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            DD+N P+LVEALKDKQV+++VCGT+FTAAIC+HKW+SGVDQSMCSGCR PFN +RKRHNC
Sbjct: 626  DDKNTPTLVEALKDKQVRNVVCGTNFTAAICIHKWISGVDQSMCSGCRQPFNLRRKRHNC 685

Query: 606  YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
            YNC L++CH+CSSKKS+KAS+APNP+KPYRVCD+C+ KLTK  ET   S    ++RG++ 
Sbjct: 686  YNCALIFCHSCSSKKSLKASLAPNPSKPYRVCDSCYSKLTKGLETDMYSS---AKRGAVV 742

Query: 666  QGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
            QGF++ V+  E+  +RS+ Q    +S++S K ++S  SK+NKK EFN TR  P+PNG S 
Sbjct: 743  QGFSDTVD--EDTETRSNAQLSRMSSIDSFKHMDSRYSKKNKKFEFNSTRVSPVPNGGSH 800

Query: 724  GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
             + LN S+S NPVFGS+KKFFSAS+PGSRI+SRATSP SRR SP R+TTPTPT  GL SP
Sbjct: 801  WSGLNISRSFNPVFGSSKKFFSASVPGSRIISRATSPVSRRPSPTRSTTPTPTFGGLTSP 860

Query: 784  KIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKC 839
            ++VV+ AK T    ++E++ LR+QV+ LTRK QL E ELERTT+QLKEA+A+AGEETAKC
Sbjct: 861  RVVVNGAKPTNDSQTQEILNLRSQVDNLTRKYQLLEAELERTTKQLKEAIAIAGEETAKC 920

Query: 840  RAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAW-DVSSAAIEQPSSPLTF--Q 896
            +AAK+VIK+LTAQLK MAE LP GA ++S        P   D+S+   E   SP +   Q
Sbjct: 921  KAAKEVIKTLTAQLKGMAEGLPGGAAKSSKLPPLPAIPIPSDISAMVTECLGSPDSSEEQ 980

Query: 897  GAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETG 956
              I NG N L++SNG       S ++ +ASH E  + N +RT   E     EWVEQDE G
Sbjct: 981  VHISNGPNGLLVSNGP------SSTRNKASHSEMAS-NGSRTPDPESYHEAEWVEQDEPG 1033

Query: 957  VYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKS 1009
            VYITL AL GG +DLKRVRFSRK+FSEKQAEQWW  NRARVYQ+YNV MVDKS
Sbjct: 1034 VYITLTALHGGARDLKRVRFSRKRFSEKQAEQWWQGNRARVYQKYNVRMVDKS 1086


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
            distachyon]
          Length = 1090

 Score = 1278 bits (3307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 710/1018 (69%), Positives = 813/1018 (79%), Gaps = 27/1018 (2%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            IFQRYPRPEKE QSFSLI +DRSLD+ICKDKDEAEVWF GLK LISRSH RK R ESRSD
Sbjct: 84   IFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLISRSHQRKWRTESRSD 143

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
             +SS  TSPR +T+RSSPLSSPF S  S  KDG +   L + Y SPPK  L+KA SD V 
Sbjct: 144  MLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGAENYRLRSPYGSPPKVGLEKAFSDIVS 203

Query: 126  YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
            Y APP+   PS+S  GSV+S+SSG SD   GH +GL  D FRVSLSSAVSSSS GSGHDD
Sbjct: 204  YTAPPRPFFPSDSNVGSVHSVSSGHSDNTNGHSRGLPMDNFRVSLSSAVSSSSHGSGHDD 263

Query: 186  GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
            GD+LGDVF+WGE TG+GILGGG  R G+ +G KMD  +PK +E A  LDVQNI+CGGRHA
Sbjct: 264  GDALGDVFMWGEGTGEGILGGGNSRFGNSSGAKMDCLLPKPLEFAGRLDVQNISCGGRHA 323

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
             LVTKQGEV+SWGEE GGRLGHGVD DV  PKL++AL ++N+ELVACGE+HTCAVTLSGD
Sbjct: 324  TLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLSGD 383

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +YTWG    NFGLLGHGNE+S W+PK+LNGPLEGIHVSS+SCGPWHTAVVTSAGQLFTFG
Sbjct: 384  LYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 443

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG+FGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SS+SNCSSGK+
Sbjct: 444  DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKI 503

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            FTWGDGD+GRLGHGDK+ RLVPTCVA+LVEPNFCQV+CGH  TVALTT+GHVYTMGS VY
Sbjct: 504  FTWGDGDKGRLGHGDKDTRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVY 563

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            GQLG+P+A+G +P RVEGKL KNFVEEI+CG YHVAVLTSRTEVYTWGKGANGRLGHGDT
Sbjct: 564  GQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 623

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            DDRN P+LVEALKDKQV+S+VCG +FTAAIC+HKWVSGVDQSMCSGCR+PFN +RKRHNC
Sbjct: 624  DDRNSPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNC 683

Query: 606  YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
            YNC LV+CH+CSSKKS+KAS+APNPNKPYRVCDNC+ KL K  ET   S    ++RG++ 
Sbjct: 684  YNCALVFCHSCSSKKSLKASLAPNPNKPYRVCDNCYCKLNKGPETDRYSS---AKRGAVL 740

Query: 666  QGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
            QGFN+ +   E   +RS+VQ    +SMES K ++S  SK+NKK EFN +R  P+PNG S 
Sbjct: 741  QGFNDPIN--EELETRSNVQLSRLSSMESFKNMDSRYSKKNKKFEFNSSRVSPIPNGSSH 798

Query: 724  GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
             + LN SKS    FGS+KKFFSAS+PGSRI+SRATSP SRRSSPPR+TTPTPTL GL SP
Sbjct: 799  WSGLNISKS----FGSSKKFFSASVPGSRIVSRATSPVSRRSSPPRSTTPTPTLGGLTSP 854

Query: 784  KIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKC 839
            ++VVD AK      ++EVI LR+QVE LTRKS L E+ELERTT+QLKEA+++AGEETAKC
Sbjct: 855  RVVVDGAKPMKDGLNQEVINLRSQVENLTRKSHLLEVELERTTKQLKEAISIAGEETAKC 914

Query: 840  RAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSP----TPAWDVSSAAIEQPSSPLTF 895
            +AAK+VIKSLTAQLK MAE LP GAV      +  P     P     S A E   SP + 
Sbjct: 915  KAAKEVIKSLTAQLKCMAEKLPEGAVAVPVKHNRLPPLSGIPLPSDISMAYENLGSPRSS 974

Query: 896  QGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDET 955
                 NGSN  I+SNG     N+       +H E   KN  R   ++     EWVEQDE 
Sbjct: 975  GEPYSNGSNGSIVSNGPSSVRNK-------THLE-VGKNGTRQPDSDSKLESEWVEQDEP 1026

Query: 956  GVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSI 1013
            GVYITL ALPGG +DLKRVRFSRK+FSE QAEQWW  NRARVY+ YNV +VDKS  SI
Sbjct: 1027 GVYITLTALPGGARDLKRVRFSRKRFSETQAEQWWQENRARVYELYNVRVVDKSVASI 1084


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score = 1264 bits (3272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 713/1020 (69%), Positives = 816/1020 (80%), Gaps = 29/1020 (2%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            IFQRYPRPEKE QSFSLI +DRSLD+ICKDKDEAEVWF GLK LISRSH RK R ESRSD
Sbjct: 84   IFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLISRSHQRKWRTESRSD 143

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
             +SS  TSPR +T+RSSPLSSPF S  S  KDG +   L + Y SPPK  LDKA SD V 
Sbjct: 144  MLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGSENYRLRSPYGSPPKAGLDKAFSDIVS 203

Query: 126  YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
            YAAPP+   PS+S  GSV+S+SSG SD   G+ +G+  D FRVSLSSAVSSSS GSGHDD
Sbjct: 204  YAAPPRPFFPSDSNVGSVHSVSSGHSDNTNGNSRGIPMDAFRVSLSSAVSSSSHGSGHDD 263

Query: 186  GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
            GD+LGDVFIWGE TG+GILGGG  R GS +G KMD  VPK +E A  LDVQNI+CGGRHA
Sbjct: 264  GDALGDVFIWGEGTGEGILGGGNSRLGSSSGAKMDCLVPKPLEFAGRLDVQNISCGGRHA 323

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
             LVTKQGEV+SWGEE GGRLGHGVD DV  PKLIDAL ++N+ELVACGE+HTCAVTLSGD
Sbjct: 324  TLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTCAVTLSGD 383

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +YTWG    NFGL GHGNE+S W+PK+LNGPLEGIHVSS+SCGPWHTAVVTSAGQLFTFG
Sbjct: 384  LYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 443

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG+FGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGK+
Sbjct: 444  DGSFGVLGHGDRQSISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 503

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            FTWGDGD+GRLGHGDKE RLVPTCVA+LVEPNFCQV+CGH  TVALTT+GHVYTMGS VY
Sbjct: 504  FTWGDGDKGRLGHGDKETRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVY 563

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            GQLG+P+A+G +P RVEGKL KNFVEEI+CG YHVAVLTSRTEVYTWGKGANGRLGHGDT
Sbjct: 564  GQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 623

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            DDRN P+LVEALKDKQV+S+VCG +FTAAIC+HKWVSGVDQSMCSGCR+PFN +RKRHNC
Sbjct: 624  DDRNSPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNC 683

Query: 606  YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
            YNC LV+CH+CSSKKS+KAS+APNPNKPYRVCD+C+GKL K  ET   S    ++RG++ 
Sbjct: 684  YNCALVFCHSCSSKKSLKASLAPNPNKPYRVCDSCYGKLNKGPETDRYSS---AKRGAIL 740

Query: 666  QGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
            QGFN+++   ++  +RS+VQ    +SMES K ++S  SK+NKK EFN +R  P+PNG S 
Sbjct: 741  QGFNDSIN--DDLETRSNVQLSRLSSMESFKNMDSRYSKKNKKFEFNSSRVSPIPNGSSH 798

Query: 724  GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
             + LN SKS    FGS+KKFFSAS+PGSRI SRATSP SRR+SPPR+TTPTPTL GL SP
Sbjct: 799  WSGLNISKS----FGSSKKFFSASVPGSRIASRATSPVSRRTSPPRSTTPTPTLGGLTSP 854

Query: 784  KIVVDDAK----RTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKC 839
            ++VVD A+      S+EV+ LR+QVE LTRKS L E+ELERTT+QLKEA+++AGEETAKC
Sbjct: 855  RVVVDGARPIKDNLSQEVVHLRSQVENLTRKSHLLEVELERTTKQLKEAISIAGEETAKC 914

Query: 840  RAAKDVIKSLTAQLKDMAEMLP------VGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPL 893
            +AAK+VIKSLTAQLK MAE LP       GAV+ +     S  P  +  S A E   SP 
Sbjct: 915  KAAKEVIKSLTAQLKGMAEKLPEGAGAGAGAVKYNRLPPLSGVPVQNDISMATENLGSPR 974

Query: 894  TFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQD 953
                   NGSN L +SNG     N+       +H E   KN  R   ++     EWVEQD
Sbjct: 975  NSGEPYSNGSNGLTVSNGPSSVRNK-------THLE-VGKNGTRQPDSDSKPESEWVEQD 1026

Query: 954  ETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSI 1013
            E GVYITL ALPGG +DLKRVRFSRK+FSE QAEQWW  NRARVY+ YNV +VDKS  SI
Sbjct: 1027 EPGVYITLTALPGGARDLKRVRFSRKRFSETQAEQWWQENRARVYELYNVRVVDKSVASI 1086


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score = 1222 bits (3163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 679/980 (69%), Positives = 788/980 (80%), Gaps = 29/980 (2%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            IFQRYPRPEKE QSFSLI +DRSLD+ICKDKDEAEVWF GLK LI+RSH RK R ESRSD
Sbjct: 129  IFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLITRSHQRKWRTESRSD 188

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
             +SS  TSPR +T+RSSPLSSPF S  S  KDG +   L + + SPPK  L+KA SD V 
Sbjct: 189  MLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGGENYRLRSPFGSPPKVGLEKAFSDIVS 248

Query: 126  YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
            YAAPPK   PS+S  GSV+S+SSG SD    H +G+  D FRVSLSSAVSSSS GSGHDD
Sbjct: 249  YAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLHSRGIPMDAFRVSLSSAVSSSSHGSGHDD 308

Query: 186  GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
            GD+LGDVFIWGE TG+GILGGG  R G+ +GVKMD  +PK +E AV LDVQNI+CGGRHA
Sbjct: 309  GDALGDVFIWGEGTGEGILGGGNSRVGN-SGVKMDCLIPKPLEFAVKLDVQNISCGGRHA 367

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
             LVTKQGE++SWGEE GGRLGHGVD DV  PKLIDAL N+N+ELVACGE+HTCAVTLSGD
Sbjct: 368  TLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGD 427

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +YTWG    N GLLGHGNE+S W+PK++NGPLEGIHVS++SCGPWHTA+VTSAGQLFTFG
Sbjct: 428  LYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFG 487

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG+FGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGK+
Sbjct: 488  DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 547

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            FTWGDGD+GRLGHGDK+ RLVPTCVAALVEPNFCQ++CGH +TVALTT+GHVYTMGSPVY
Sbjct: 548  FTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVY 607

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            GQLG+P+A+G LP RVEGKL KNFVEEI+CG YHVAVLTSRTEVYTWGKGANGRLGHGDT
Sbjct: 608  GQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 667

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            DDR+ P+LVE+LKDKQV+++VCG +FTAAIC+HKWVSGVDQSMCSGCR+PFN +RKRHNC
Sbjct: 668  DDRSSPTLVESLKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNC 727

Query: 606  YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
            YNC LV+CH CSSKKS+KAS+APNPNKPYRVCD+C+ KL K  ET   S    ++RGS+ 
Sbjct: 728  YNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSS---AKRGSVI 784

Query: 666  QGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
            QGFN++V+  E   ++S+ Q    +S+ES K ++S +SK+NKK EFN +R  P+PNG S 
Sbjct: 785  QGFNDSVD--EELETKSNAQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNGSSH 842

Query: 724  GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
             + LN SKS    FGS+KKFFSAS+PGSRI+SRATSP SRR+SPPR+TTPTPTL GL SP
Sbjct: 843  WSGLNISKS----FGSSKKFFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSP 898

Query: 784  KIV--VDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRA 841
            ++V  V      S+EV+ LR+QVE LTRKSQL E +LERTT+QLKEA+++AGEETAKC+A
Sbjct: 899  RVVDGVKPNDSISQEVLSLRSQVENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKA 958

Query: 842  AKDVIKSLTAQLKDMAEMLPVGA--VRNSNSFHSSPTPAWDVS---SAAIEQPSSPLTFQ 896
            AK+VIKSLTAQLK MAE LP GA  V+NS      P P   +    S A E   SP +  
Sbjct: 959  AKEVIKSLTAQLKGMAEKLPEGAGLVKNS---RLPPLPGISIPTDISVASESLGSPRSSG 1015

Query: 897  GAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETG 956
                NGSN L++SNG     N+       SH E   KN  R   ++     EWVEQDE G
Sbjct: 1016 EPCSNGSNGLLVSNGPTSVRNK------LSHPE-IPKNGTRLPDSDSKHESEWVEQDEPG 1068

Query: 957  VYITLVALPGGLKDLKRVRF 976
            VYITL ALPGG +DLKRVRF
Sbjct: 1069 VYITLTALPGGTRDLKRVRF 1088


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score = 1163 bits (3008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/907 (70%), Positives = 737/907 (81%), Gaps = 25/907 (2%)

Query: 124  VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGH 183
            +LYA PP+   PS+S  GSV+S+SSG SD   GH +G+  D FRVS SSAVSSSS GSGH
Sbjct: 1    MLYAVPPRGFFPSDSNAGSVHSMSSGHSDNTNGHPRGVPMDAFRVSYSSAVSSSSHGSGH 60

Query: 184  DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
            DDGD+LGDVFIWGE TG+GILGGG  R GS +G KMD  VPK +E AV LDVQNI+CGGR
Sbjct: 61   DDGDALGDVFIWGEGTGEGILGGGGSRVGSSSGAKMDCLVPKPLEFAVRLDVQNISCGGR 120

Query: 244  HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            HAALVTKQGE++SWGEE GGRLGHGVD DVS PKLIDAL ++N+ELVACGE+HTCAVTLS
Sbjct: 121  HAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLS 180

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            GD+YTWG     FGLLGHGN++S W+PK +NGPLEGIHVSS+SCGPWHTA+VTSAGQLFT
Sbjct: 181  GDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFT 240

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            FGDG+FGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEVM G+SSSSNCSSG
Sbjct: 241  FGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSG 300

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            K+FTWGDGD+GRLGHGDKEA+LVPTCVAALVEPNFCQV+CGH LTVALTT+GHVYTMGS 
Sbjct: 301  KIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSA 360

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            VYGQLG+ +A+G LP RVEGKL KNFVEEI+CG YHVAVLTSRTEVYTWGKGANGRLGHG
Sbjct: 361  VYGQLGNTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG 420

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            DTDD+N P+LVEALKDKQV+S+VCG +FTAAIC+HKWVSGVDQSMCSGCR PFN +RKRH
Sbjct: 421  DTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGVDQSMCSGCRQPFNLRRKRH 480

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCYNC LV+CH+CSSKKS+KAS+APN NKPYRVCD C+ KLTK  ET    HS+ ++R +
Sbjct: 481  NCYNCALVFCHSCSSKKSLKASLAPNTNKPYRVCDTCYSKLTKGPET--DMHSS-AKRAA 537

Query: 664  MNQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGV 721
               GF++ +E  E+  +RS+ Q    +SMES K ++S  SK+NKK EFN TR  P+PNG 
Sbjct: 538  TVPGFSDTIE--EDLETRSNAQLSRLSSMESFKHLDSRYSKKNKKFEFNSTRVSPVPNGS 595

Query: 722  SQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLA 781
            S  + LN S+S NPVFGS+KKFFSAS+PGSRI+SRATSP SRR+SPPR+TTPTPTL GL 
Sbjct: 596  SHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRASPPRSTTPTPTLGGLT 655

Query: 782  SPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETA 837
            SP++V +D K T    S+EV+ LR+QVE LTRKSQL E+ELERTT+QLKEA+++AGEETA
Sbjct: 656  SPRVVPNDGKPTNDALSQEVLNLRSQVESLTRKSQLLEVELERTTKQLKEAISIAGEETA 715

Query: 838  KCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAW----DVSSAAIEQPSSPL 893
            KC+AAK+VIKSLTAQLK MAE LP GA +N+      P P      D+SS A E   SP 
Sbjct: 716  KCKAAKEVIKSLTAQLKGMAERLPGGAAKNTK---LPPLPGISIPSDISSMATESVVSPS 772

Query: 894  TFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQD 953
            +    I NG N L+ SNG       S  + + SH E   KN +R   AE     EWVEQD
Sbjct: 773  SSGEQIINGHNGLLASNGP------SSVRNKTSHPE-VGKNGSRPPDAESCHDAEWVEQD 825

Query: 954  ETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSI 1013
            E GVYITL ALPGG +DLKRVRFSRK+FSE QAEQWW  NRARVYQQYNV +VDKS+ S+
Sbjct: 826  EPGVYITLTALPGGARDLKRVRFSRKRFSETQAEQWWQENRARVYQQYNVRVVDKSTASV 885

Query: 1014 GREGLAH 1020
              + +A+
Sbjct: 886  DNDIVAN 892


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
            protein [Zea mays]
          Length = 964

 Score = 1112 bits (2875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/926 (67%), Positives = 722/926 (77%), Gaps = 48/926 (5%)

Query: 96   KDGLDPLHLHTSYESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRT 155
            +DG D   L T Y SPPKN L+KA SD +LYA PP+   PS+S  GSV+S+SSG SD   
Sbjct: 70   EDGSDNYRLRTPYGSPPKNGLEKAFSDVMLYAVPPRGFFPSDSNAGSVHSMSSGQSDNTN 129

Query: 156  GHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYA 215
            GH +G+  D FRVS SSAVSSSS GSGHDDGD+LGDVFIWGE TG+GILGGG  R GS +
Sbjct: 130  GHSRGVPMDAFRVSYSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGGSRVGSSS 189

Query: 216  GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
            G KMD  VPK +E AV LDVQNI+CGGRHAALVTKQ                        
Sbjct: 190  GAKMDCLVPKPLEFAVRLDVQNISCGGRHAALVTKQA----------------------- 226

Query: 276  PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
             KLIDAL ++N+ELVACGE+HTCAVTLSGD+YTWG     FGLLGHGN++S W+PK +NG
Sbjct: 227  -KLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNG 285

Query: 336  PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            PLEGIHVSS+SCGPWHTA+VTSAGQLFTFGDG+FGVLGHGDR S+S PREV+SLKGLRTV
Sbjct: 286  PLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTV 345

Query: 396  RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            RAACGVWHTAAVVEVM  +S+SSNCSSGK+FTWGDGD+GRLGHGDKE +LVPTCVAALVE
Sbjct: 346  RAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVE 405

Query: 456  PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 515
            PNFCQV+CGH LTVALTT+GHVYTMGS VYGQLG+ +A+G LP RVEGKL KNFVEEI+C
Sbjct: 406  PNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLYKNFVEEISC 465

Query: 516  GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G YHVAVLTSRTEVYTWGKGANGRLGHGDT+D+N P+LVEALKDKQV+++VCG +FTAAI
Sbjct: 466  GAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNVVCGINFTAAI 525

Query: 576  CLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYR 635
            C+HKWVSGVDQSMCSGCR PFN +RKRHNCYNC LV+CH+CSSKKS+KAS+APN NKPYR
Sbjct: 526  CIHKWVSGVDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNGNKPYR 585

Query: 636  VCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFG--TSMESL 693
            VCD C+ KLTK  ET    H + ++R +   GF++ +E  E+  +RS+ Q    +SMES 
Sbjct: 586  VCDTCYSKLTKGLET--DMHFS-AKRAATVPGFSDTIE--EDLETRSNAQLSRLSSMESF 640

Query: 694  KKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRI 753
            K ++S  SK+NKK EFN TR  P+PNG S  + LN S+S NPVFGS+KKFFSAS+PGSRI
Sbjct: 641  KHLDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRI 700

Query: 754  MSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRT---SEEVIKLRAQVEELTRK 810
            +SRATSP SRR+SPPR+TTPTPTL GL SP++  D        S+EV+ LR+QVE LTRK
Sbjct: 701  VSRATSPISRRTSPPRSTTPTPTLGGLTSPRVPTDGKPTNDALSQEVLNLRSQVESLTRK 760

Query: 811  SQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNS 870
            SQL E+ELERTT+QLKEA+++AGEETAKC+AAK+VIKSLTAQLK MAE LP GA +N+  
Sbjct: 761  SQLLELELERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQLKGMAERLPGGAAKNTK- 819

Query: 871  FHSSPTPAW----DVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEAS 926
                P P      D+SS A+E   SP +    I NG N L+ SNG       S  + + S
Sbjct: 820  --LPPLPGISIPSDISSLAMESVGSPSSSGEQIINGHNGLLASNGP------SSVRNKTS 871

Query: 927  HCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQA 986
            H E   KN +R   AE     EWVEQDE GVYITL ALPGG +DLKRVRFSRK+FSE QA
Sbjct: 872  HPE-VGKNGSRPPDAESCHDAEWVEQDEPGVYITLTALPGGARDLKRVRFSRKRFSETQA 930

Query: 987  EQWWAANRARVYQQYNVSMVDKSSVS 1012
            EQWW  NRARVYQQYNV +VDKS+ S
Sbjct: 931  EQWWQENRARVYQQYNVRVVDKSTAS 956


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score = 1091 bits (2821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/1013 (58%), Positives = 728/1013 (71%), Gaps = 51/1013 (5%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            PIFQRYPRPEKEYQSFSLIY DRSLDLICKDKDEAEVWF GLK LISR +YRK R+E R 
Sbjct: 76   PIFQRYPRPEKEYQSFSLIYGDRSLDLICKDKDEAEVWFIGLKGLISRGNYRKWRSEIRD 135

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            D +SS   SP +  +R SP  S    G + Q           ++E+ P++ L KA SD +
Sbjct: 136  DSISS--ESPHSRARRISPSLSSSDPGDTQQT--------QVTFENIPQSGLGKAFSDVI 185

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
             Y A  K    +ES   S++SLSSGG D   G     + + FRVSLSSAVSSSSQGSGHD
Sbjct: 186  SYTASTKSFTQAESVASSLSSLSSGGVDNSNGRTS--ASENFRVSLSSAVSSSSQGSGHD 243

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            D D+LGDVF+WGE  GDGI+G G+HR GS +  K+D+ +PKA+ES VVLDV +IACGG+H
Sbjct: 244  DFDALGDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKH 303

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            A LVTK+GEVFSWGEE G RLGHGV+ DVSHPKLIDAL  +N+ELVACGE+H+CAVTLSG
Sbjct: 304  AVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSG 363

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+YTWG    N GLLGHG+E S W+PKK++GP+EG+HVS V+CGPWHTAVVTSAGQLFTF
Sbjct: 364  DLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLFTF 423

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG---SSSSSNCS 421
            GDGTFG LGHGD  S+S PREV++L+G RT+R ACGVWHTAAVVE+M+      SS + S
Sbjct: 424  GDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSS 483

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            SGKLFTWGDGD+GRLGHGDKE RLVP  V AL+  +FCQV+CGH+L+VALTT+G VYTMG
Sbjct: 484  SGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSGRVYTMG 543

Query: 482  SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            S VYGQLG P A+GK+PT VEGK+  +FVEE+ACG YHVAVLTS+TEVYTWGKG NG+LG
Sbjct: 544  SAVYGQLGSPVADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQLG 603

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRK 601
            HGD D RN P+LV+ LKDKQVK++VCG +FTAAI LHKWVS  D S+CSGC   F F+RK
Sbjct: 604  HGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISLHKWVSCADHSICSGCHNQFGFRRK 663

Query: 602  RHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRR 661
            RHNCYNCGLV+C+TCSS+KS+KAS+APN NKPYRVCD+CF KL KA E+ S      +R 
Sbjct: 664  RHNCYNCGLVFCNTCSSRKSLKASLAPNMNKPYRVCDDCFTKLKKAMESGSVLRIPKARS 723

Query: 662  GSMNQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPN 719
             ++ Q  NE  E  +    R   Q    +S++S  + ES   K + K EFN  R  P  N
Sbjct: 724  SNILQKSNEIAER-DTMGPRVQGQLSRLSSVDSFSRAESKHYKCDTKLEFNDARVSPHLN 782

Query: 720  GVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSG 779
            G  Q  + ++SK SN +FG ++K FSAS PGSRI+SRATSP S +SSPP++     +L+ 
Sbjct: 783  GNVQRGSFHSSKLSNSLFGGSRKIFSASRPGSRIVSRATSPVSGKSSPPQSAMLAASLAV 842

Query: 780  LASPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEE 835
            + SP+   DD K T    S E+I LRAQVE LT KSQ+ E ELER++R+LKE  AVA  E
Sbjct: 843  VRSPEATDDDPKHTNDSLSREIINLRAQVENLTGKSQILEAELERSSRKLKEVTAVAEGE 902

Query: 836  TAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTF 895
              KC+AAK+VIKSLTAQLK+MAE +P   +  S S  S+      V   + E  S+ LT 
Sbjct: 903  AEKCKAAKEVIKSLTAQLKEMAERVPEEHISISKSGSSARQTPNIVDMFSNENHSTSLTS 962

Query: 896  QGAIPNGSN-SLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDE 954
              +  NGS+ + ILS+G+        +QTE S                     +WV QDE
Sbjct: 963  PESESNGSSVNPILSSGTK-------AQTEKS---------------------DWVVQDE 994

Query: 955  TGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVD 1007
             GVY+TL +L GG  +L+RVRFSRK+F+E+QAE WWA N ++V +++++  V+
Sbjct: 995  PGVYLTLSSLAGGGNELRRVRFSRKRFTEEQAEVWWAENGSKVCERHDIRSVE 1047


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score = 1072 bits (2772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/804 (72%), Positives = 675/804 (83%), Gaps = 13/804 (1%)

Query: 6   IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
           IFQRYPRPEKE QSFSLI +DRSLD+ICKDKDEAEVWF GLK LI+RSH RK R ESRSD
Sbjct: 83  IFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLITRSHQRKWRTESRSD 142

Query: 66  EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
            +SS  TSPR +T+RSSPLSSPF S  S  KDG++   L + + SPPK  L+KA SD V 
Sbjct: 143 MLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGVENYRLRSPFGSPPKVGLEKAFSDIVS 202

Query: 126 YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
           YAAPPK   PS+S  GSV+S+SSG SD    H +G+  D FRVSLSSAVSSSS GSGHDD
Sbjct: 203 YAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLHSRGIPMDAFRVSLSSAVSSSSHGSGHDD 262

Query: 186 GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
           GD+LGDVFIWGE TG+GILGGG  R G+ +GV MD  +PK +E AV LDVQNI+CGGRHA
Sbjct: 263 GDALGDVFIWGEGTGEGILGGGNSRVGNSSGVNMDCLIPKPLEFAVKLDVQNISCGGRHA 322

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            LVTKQGE++SWGEE GGRLGHGVD DV  PKLIDAL N+N+ELVACGE+HTCAVTLSGD
Sbjct: 323 TLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGD 382

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +YTWG    N GLLGHGNE+S W+PK++NGPLEGIHVS++SCGPWHTA+VTSAGQLFTFG
Sbjct: 383 LYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFG 442

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           DG+FGVLGHGDR S+S PREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGK+
Sbjct: 443 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 502

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           FTWGDGD+GRLGHGDK+ RLVPTCVAALVEPNFCQ++CGH +TVALTT+GHVYTMGSPVY
Sbjct: 503 FTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVY 562

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           GQLG+P+A+G LP RVEGKL KNFVEEI+CG YHVAVLTSRTEVYTWGKGANGRLGHGDT
Sbjct: 563 GQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 622

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
           DDR+ P+LVEALKDKQV+++VCG +FTAAIC+HKWVSGVDQSMCSGCR+PFN +RKRHNC
Sbjct: 623 DDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNC 682

Query: 606 YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
           YNC LV+CH CSSKKS+KAS+APNPNKPYRVCD+C+ KL K  ET   S    ++RGS+ 
Sbjct: 683 YNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSS---AKRGSVI 739

Query: 666 QGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
           QGFN++V+  E   ++S+ Q    +S+ES K ++S +SK+NKK EFN +R  P+PNG S 
Sbjct: 740 QGFNDSVD--EELETKSNAQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNGSSH 797

Query: 724 GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
            + LN SKS    FGS+KKFFSAS+PGSRI+SRATSP SRR+SPPR+TTPTPTL GL SP
Sbjct: 798 WSGLNISKS----FGSSKKFFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSP 853

Query: 784 KIV--VDDAKRTSEEVIKLRAQVE 805
           ++V  V      S+EV+ LR+QV 
Sbjct: 854 RVVDGVKPNDSISQEVLSLRSQVH 877


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score = 1033 bits (2670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/1040 (54%), Positives = 711/1040 (68%), Gaps = 68/1040 (6%)

Query: 7    FQRYPRPEKEYQSFSLIY-NDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            FQRYPR EKEYQSFSLIY NDRSLDLICKDKDEAEVWF GLKAL+S     + R +SRS+
Sbjct: 78   FQRYPRLEKEYQSFSLIYGNDRSLDLICKDKDEAEVWFVGLKALVSGGQLSRLRFDSRSE 137

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGS-SQKDGLDPLHLHTSYESPPKNVLD-KALSD- 122
                  ++  A   R SP SSPFG+  +  ++DG +     + Y SPP+  L  ++ S  
Sbjct: 138  CGPPSDSNSPATWSRISPASSPFGNVDNLPRQDGREAFRFQSPYGSPPRYALQQRSFSPG 197

Query: 123  AVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKG---------LSGDT-FRVSLSS 172
            A    +  K+ L + S  GS++S  S        HL+G         +  D  FRVS+SS
Sbjct: 198  APSLDSSSKLFLENASTAGSLHSDMSSEPAASVLHLRGGAAAATSAAIPLDANFRVSMSS 257

Query: 173  AVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
            AVSSSSQGSG ++GD+LGDVF+WGE  G G             G+K DS +PKA+ESAVV
Sbjct: 258  AVSSSSQGSGQEEGDALGDVFLWGESVGSGD-----------GGIKTDSLLPKALESAVV 306

Query: 233  LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
            LDV +IACG RHAALVTKQGEVF WG+E GGRLGHGVD DV+HPKL++AL   N E VAC
Sbjct: 307  LDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPKLVEALATTNTEFVAC 366

Query: 293  GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
            GE+H+CAVTLSGD++TWG    ++GLLGHGN++S W PK++ GPLEGI VSSV+CG WHT
Sbjct: 367  GEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGIRVSSVACGVWHT 426

Query: 353  AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            A+VTSAGQLFTFGDGTFGVLGHGD+ SV+ P+EV+SLKGL+TVR ACGVWHTAAVVEVMV
Sbjct: 427  ALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGVWHTAAVVEVMV 486

Query: 413  GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G S++   SSGKLFTWGDGD+GRLGHGDKE +LVPTCVAALV+ NF QV+CGH+LTVALT
Sbjct: 487  GYSNAGG-SSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALT 545

Query: 473  TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
              G V+TMGS +YGQLGD +A+GKLP  VEG+L + FVEEIACG YHVAVLT++TEVYTW
Sbjct: 546  INGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTW 605

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 592
            GKGANGRLGHGD  DRN P+LVEALK+KQVKS+ CG+ FTAAICLHKWVSG DQS+CSGC
Sbjct: 606  GKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSGFTAAICLHKWVSGADQSLCSGC 665

Query: 593  RIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTK--ATET 650
            R PF F RKRHNCYNCG  +CH+CS++K++KAS+APNP KPYRVCD CF KL K      
Sbjct: 666  RQPFGFTRKRHNCYNCGHAFCHSCSARKALKASLAPNPAKPYRVCDPCFVKLKKGGEVLL 725

Query: 651  SSSSHSTVSRRGSM--NQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE 708
                      R SM   QG   +V+                 +   + E    ++ ++ +
Sbjct: 726  PGGGGGAGVPRKSMVATQGQQGSVK--------------KPRKLELQPEQQQQQQQQQPQ 771

Query: 709  FNRTRGLPLPNGVSQGNALNNSKSSNPVF-----GSTKKFFSA-SLPGSRIMSRATSPTS 762
            ++  + L   + V    A++     NP        S +   SA S+P SR+ SR+ SP S
Sbjct: 772  YHLNQALQFSSSVQPWGAVDIPSVFNPYASGGSGSSLRPLVSALSVPTSRVASRSVSPLS 831

Query: 763  RRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIEL 818
            RR SPPR+ TPTPTL+GLA+PK +VD+ KR ++    EV+KL+ QVE+L RK   Q+ EL
Sbjct: 832  RRPSPPRSATPTPTLAGLATPKTLVDELKRENDVVNHEVVKLKEQVEDLNRKLLQQDAEL 891

Query: 819  ERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRN----SNSFHSS 874
             R+ +Q++EALA+AGEE+AKC+AAK+VIK LTAQLK+MAE +P G  R+       FH  
Sbjct: 892  RRSAQQVQEALAIAGEESAKCQAAKEVIKQLTAQLKEMAERVPAGLHRHKQQQQQQFHHD 951

Query: 875  PTPAWDVSSAAIEQPSSPLTFQGAIPN----GSNSLILSNGSDFGDNRSPSQTEASHCEA 930
              P        +  P + L       +     +  L  S G+   + RS +         
Sbjct: 952  QLP------NGVHPPVTTLDSLSVTDDEGGYSTAHLRYSLGALTPNLRSIAPDTNGLASP 1005

Query: 931  TTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWW 990
              + +  + +  P   ++WVEQD+ GVY+TL  LP G ++LKRVRFSRK+FSEKQAEQWW
Sbjct: 1006 AQQQQASSRRPSPEPENDWVEQDQPGVYLTLCVLPAGGRELKRVRFSRKRFSEKQAEQWW 1065

Query: 991  AANRARVYQQYNVSMVDKSS 1010
              NR RV++QYN+  VD+++
Sbjct: 1066 QENRQRVHEQYNIRSVDRTA 1085


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  988 bits (2553), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1064 (56%), Positives = 723/1064 (67%), Gaps = 99/1064 (9%)

Query: 5    PIFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAES 62
            P+F RYPRPEKE QS SL+++  +RSLD+ICKDKDEAEVWF GLKA ++ +  RK +  +
Sbjct: 76   PVFLRYPRPEKECQSLSLLHSNEERSLDVICKDKDEAEVWFVGLKASVAGAQLRKSKFNN 135

Query: 63   RSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLD----------PLHLHTSYESPP 112
               E +    SP A T+ SSPL+SPFGS  + Q++  D          PL     Y   P
Sbjct: 136  VRHERTVDIVSP-ALTRNSSPLTSPFGSTDNLQQESGDFFKTSSFIGSPLQSEKGYLGGP 194

Query: 113  KNVLD-KALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLS 171
             + +D K   DA            S  +      L   G+            D +R+S+S
Sbjct: 195  TSTIDSKNNFDAGSVGGSMHSGSSSMGSDSVSAHLRLAGAG---------QSDNYRISMS 245

Query: 172  SAVSSSSQGSGH-DDG----DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKA 226
            SAVSSSSQ S H +DG    + LGDV++WGE  GDGILGGGIHR GS   + +D+ +PK 
Sbjct: 246  SAVSSSSQSSQHGEDGLHYAEPLGDVYMWGEGVGDGILGGGIHRIGSGGAINLDALLPKP 305

Query: 227  VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
            +ESA+VLDVQ IACGG+HAALVTKQGEVF+WGEE GGRLGHGVD DVSHP+L++AL +  
Sbjct: 306  LESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASST 365

Query: 287  VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
             E+VACGE+H CAVTLSGD+Y+WG    N GLLGHGN++S W+PK++NGPLEG+ V+S++
Sbjct: 366  TEVVACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGLRVASIA 425

Query: 347  CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            CGPWHTA+VT+ G LFTFGDGTFGVLGH DR S  +PREV+SLKGLRTVRAACGVWHTAA
Sbjct: 426  CGPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTVRAACGVWHTAA 485

Query: 407  VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
            VVEVMVGSSS+ +CSSGKLFTWGDG++GRLGHGDKE RLVPTCVAALV+ NF QV+CG+S
Sbjct: 486  VVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDHNFRQVACGYS 545

Query: 467  LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            LTVALTT G V+TMGS  YGQLGDP+A+GKLP  VEGKL + +VE+IACG +HVAVLT  
Sbjct: 546  LTVALTTKGGVFTMGSSTYGQLGDPQADGKLPGLVEGKLVEAYVEDIACGAHHVAVLTHN 605

Query: 527  TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQ 586
            +EVYTWGKGANGRLGHGD +DRN P+LVEALK+KQVKSI CG +FTAAICLHKW+SG DQ
Sbjct: 606  SEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGATFTAAICLHKWLSGADQ 665

Query: 587  SMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTK 646
            + CSGC+ PF F RKRHNCYNCGLVYCH CSSKK++KAS+APNP KP+RVCD CF KL K
Sbjct: 666  NACSGCKQPFGFTRKRHNCYNCGLVYCHACSSKKALKASLAPNPGKPFRVCDPCFLKLRK 725

Query: 647  ATETSSSSHSTVSRRGSMNQGFNEAVE------HGENFVSRSH----------VQFGTSM 690
            A E      + +S+R   N+  N  VE       GE    R            ++FG   
Sbjct: 726  AGEGGLGGVAALSKRSVPNR--NRGVEVKDGSGKGEFRAPRPQGPNTGRPPITLEFG--- 780

Query: 691  ESLKKVESGSS--KRNKKQEFNRTRGLPLPNGVSQGNALNN----SKSSNPVFGSTKK-- 742
                KV  G S  KR KK E + +R  P PNGVS G         +  S P F +     
Sbjct: 781  ----KVGEGKSGTKRGKKPENSSSRISPAPNGVSSGATWGAVSVPAGFSKPPFQTGLNGP 836

Query: 743  -FFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRT----SEEV 797
               S+S    R +SRA SP SRRSSPPR+TTPTPT SGL  PK VV+D K+T    S+E 
Sbjct: 837  VAVSSSAVAGRAVSRAVSPLSRRSSPPRSTTPTPTGSGLVIPKTVVEDLKKTNDALSDEN 896

Query: 798  IKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMA 857
            I+LR+QVE L R+ Q  E E++R+ +QL+ A+++A EE AK RAAK+VIKSLT+QLK+MA
Sbjct: 897  IQLRSQVESLARQLQNHEKEVQRSAQQLQNAISLATEEAAKSRAAKEVIKSLTSQLKEMA 956

Query: 858  EMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILS-------- 909
            E LP G  R  +S  S      DVS++A+   S+     GA+  GS  L L         
Sbjct: 957  EKLPTGTFRQFHS-RSGSLSRLDVSNSALG--SADFDALGAV--GSEGLGLPFQQFSSNP 1011

Query: 910  --NGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGG 967
              N  DF  N   S   AS  E                  EWVEQDE GVYITL ALPGG
Sbjct: 1012 AINVPDFEANGVASPHSASKPET-----------------EWVEQDEPGVYITLTALPGG 1054

Query: 968  LKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV-SMVDKSS 1010
             KDLKRVRFSRK+FSE++AEQWWA NR RV++QYNV   VD+ S
Sbjct: 1055 GKDLKRVRFSRKRFSEREAEQWWAENRVRVHEQYNVRGGVDRGS 1098


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  974 bits (2519), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/1059 (55%), Positives = 728/1059 (68%), Gaps = 77/1059 (7%)

Query: 5    PIFQRYPRPEKEYQSFSLIY--NDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAES 62
            P+F RYPRPEKE QSFSLI+   +RSLDL   DKDEAEVWF GLKA ++ +  RK +  +
Sbjct: 76   PVFLRYPRPEKECQSFSLIHANEERSLDL---DKDEAEVWFVGLKASVAGAQLRKSKLHT 132

Query: 63   RSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESP---PKNVLDKA 119
               + S    SP A T+ SSPL+SPFGS  +  ++  D     +   SP    K  L  +
Sbjct: 133  LRHDGSVENISP-AVTRHSSPLTSPFGSTDNLNQESGDFFKNSSFIGSPLRSEKGYLGGS 191

Query: 120  LS--------DAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLS 171
            LS        DA            S  +      L   G+            D +R+S+S
Sbjct: 192  LSTVETKNNYDAGSVGGSMHSGSSSMGSDSVSAQLRLVGAG---------QSDNYRISMS 242

Query: 172  SAVSSSSQGSGH-DDG----DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKA 226
            SAVSSSSQ S H +DG    ++LGDV++WGE  GDGILGGG  R G+   + +D+ +PKA
Sbjct: 243  SAVSSSSQSSQHGEDGSHHAEALGDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKA 302

Query: 227  VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
            +ESA+VLDVQ +ACGG+HAALVTKQGEVF+WGEE GGRLGHGVD DVSHP+L++AL +  
Sbjct: 303  LESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASST 362

Query: 287  VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
             E+VACGE+H CAVTLSGD+YTWG    + GLLGHGN++S W+PK++NGPLE + V+S++
Sbjct: 363  TEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIA 422

Query: 347  CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            CGPWHTAVVT+AGQLFTFGDGTFGVLGH DR S  +PREV+SLKGLRTVRAACGVWHTAA
Sbjct: 423  CGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAA 482

Query: 407  VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
            VVEVMVGSSS+S+CSSGKLFTWGDGD+GRLGHGDKE RLVPTCVAALV+ NF +V+CGHS
Sbjct: 483  VVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHS 542

Query: 467  LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            LTVALTT G V+TMGS ++GQLGDP+A+GKLP  VEG+L   +VE+IACG +HVA +T +
Sbjct: 543  LTVALTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLK 602

Query: 527  TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQ 586
            +EVYTWGKGANGRLGHGD +DRN P+LVEALK+KQVKSI CG +FTAA+CLHKW+SG DQ
Sbjct: 603  SEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWLSGADQ 662

Query: 587  SMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTK 646
            + CSGCR PF+F RKRHNCYNCGLV+CH CSSKK++KAS+APNP KPYRVCD C  KL K
Sbjct: 663  NACSGCRQPFSFTRKRHNCYNCGLVFCHACSSKKALKASLAPNPGKPYRVCDPCCVKLRK 722

Query: 647  ATETSSSSHSTVSRRG--SMNQGF--NEAVEHGENFVSRSH----------VQFGTSMES 692
            A+E    + +++S+RG  S N+G    E    GE  V R            ++FG + E 
Sbjct: 723  ASEGGVGAGASLSKRGAPSRNRGMEVKEGSGKGEFRVPRPQAPNAGRPPITLEFGKAGEG 782

Query: 693  LKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN----SKSSNPVFGSTKK---FFS 745
               +     KR KK E + +R  P+PNG S G+        +  S P F  +       S
Sbjct: 783  KLGM-----KRGKKPENSSSRVSPVPNGTSGGSTWGAVSVPAGFSKPPFQPSLNGPLAIS 837

Query: 746  ASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRT----SEEVIKLR 801
            +S+   R +SRA SP SRR+SPPR+TTPTPT SGLA PK VV+D K+T    S+E I+LR
Sbjct: 838  SSVVSGRAVSRAVSPLSRRTSPPRSTTPTPTGSGLAIPKTVVEDLKKTNDTLSDENIQLR 897

Query: 802  AQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLP 861
            +QVE L R+ Q  E E++R+ +QL+ A+A+A EE AK RAAK+VIKSLT+QLK+MAE LP
Sbjct: 898  SQVESLARQLQNYEKEIQRSAQQLQNAIALATEEAAKSRAAKEVIKSLTSQLKEMAEKLP 957

Query: 862  VGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPS 921
            +G  R S+S   + T A D+ S          T    + +G  +  L+       + +  
Sbjct: 958  LGGFRLSHSRPHAGTEA-DIGS----------TLGRVVGSGRMATRLAEVDTNEYDTAQR 1006

Query: 922  QTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKF 981
              E      T+ +     + E     EWVEQDE GVYITL AL GG KDLKRVRFSRK+F
Sbjct: 1007 NDEGIRASGTSVSSENGREPE----TEWVEQDEPGVYITLTALLGGGKDLKRVRFSRKRF 1062

Query: 982  SEKQAEQWWAANRARVYQQYNV-SMVDKSSVSIGREGLA 1019
            SE++AEQWWA NR RV++QYNV   +D+ S   G  G A
Sbjct: 1063 SEREAEQWWAENRVRVHEQYNVRGGIDRGSNPSGAPGSA 1101


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score =  959 bits (2478), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/1006 (54%), Positives = 670/1006 (66%), Gaps = 68/1006 (6%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYR-KGRAESRS 64
            IFQRYPRPEKEYQSFSLIY+DRSLDLICKDKDEAEVWF GLKALI+R  Y+ K R E RS
Sbjct: 77   IFQRYPRPEKEYQSFSLIYSDRSLDLICKDKDEAEVWFVGLKALITRGSYQSKWRIEPRS 136

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGL-DPLHLHTSYESPPKNVLDKALSDA 123
            +  SS   SP   T+R S   SPF        DG   P+     +ES P N L KA  D 
Sbjct: 137  ESTSS--DSPHIRTRRHSRSISPFVRSSLWHGDGQGSPV----PFESIPSNRLGKAFCDI 190

Query: 124  VLYAAPPKVLLPSE---SACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQG 180
            + Y A  K    +E   S   S+N+     S+GRT      + DT RVSLSSAVSSSSQG
Sbjct: 191  ISYTAAEKSPSRAELLSSPFSSLNAACVDNSNGRTS-----TADTVRVSLSSAVSSSSQG 245

Query: 181  SGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
            S H+D D+LGDVF WGE  GDGILGGG+H +G  +  K+D+F+PKA+ES VVLDV  IAC
Sbjct: 246  SYHEDFDALGDVFFWGEGVGDGILGGGVHITGITSSPKVDAFLPKALESKVVLDVHYIAC 305

Query: 241  GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
            GGRHA LVTK GE+FSWGEE GGRLGHG+ +DV +PKLID L  +N+ELVACGE+HTCAV
Sbjct: 306  GGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDTLAGMNIELVACGENHTCAV 365

Query: 301  TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            T SGD+YTWG    N GLLGHG+E S W+PK++ G +EGIHVS VSCGPWHTA VTS GQ
Sbjct: 366  TFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQ 425

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV---GSSSS 417
            LFTFGDGTFG LGHGD  S + PREV++L+GLRT+R +CGVWHTAA VE+         S
Sbjct: 426  LFTFGDGTFGALGHGDHSSATVPREVETLRGLRTIRVSCGVWHTAAAVEITTESSSPGGS 485

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
             + + GKLFTWG+GD  RLGHGDKE RL P CV AL + N CQV+CGH+LT+ALT  G V
Sbjct: 486  GSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALGDENICQVACGHNLTLALTAAGRV 545

Query: 478  YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
            YTMGS  YGQLG+P+A GK+P  VEGK+    +EEIACG YHVAVLTS+ EVYTWGKG N
Sbjct: 546  YTMGSTSYGQLGNPRATGKVPAIVEGKIAGKIIEEIACGSYHVAVLTSKAEVYTWGKGTN 605

Query: 538  GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFN 597
            G+LGHGD  DRN P++V+ L+DKQV+++ CG++FTA ICLHKWVS  D S+CSGC  PF 
Sbjct: 606  GQLGHGDNKDRNQPTVVDFLRDKQVRAVACGSNFTAIICLHKWVSSADHSVCSGCHNPFG 665

Query: 598  FKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHST 657
            F+RKRHNCYNCGLV+C  CSS+KS+KAS+APN NKP+RVCD+CF KL KA E  +     
Sbjct: 666  FRRKRHNCYNCGLVFCKACSSRKSLKASLAPNMNKPHRVCDDCFNKLKKAAEPGTVPRIP 725

Query: 658  VSRRGSMNQGFNEAVEHGENFVSRSHVQFGT--SMESLKKVESGSSKRNKKQEFNRTRGL 715
             SR G++NQ  NEA +  E    +   Q     S++S  + ES  S+R++  E + TR  
Sbjct: 726  KSRAGNLNQKTNEAADR-ETLDPKLQTQLSRLPSLDSASQAESWHSRRDRISESDTTRVF 784

Query: 716  PLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTP 775
            P+  G  Q     +SK S+ + G++  FF     GSR+   AT P   R++PPR++    
Sbjct: 785  PVLIGNWQLGHFYSSKGSSFLGGTSTNFFLNPASGSRMPPPATPPLPGRTTPPRSS---- 840

Query: 776  TLSGLASPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAV 831
                        DD+K      S+E+I LRAQVE+LT KS   E ELER +RQLKE  A+
Sbjct: 841  -----------FDDSKHMNDSLSDEIISLRAQVEDLTLKSCRLEAELERKSRQLKEVAAI 889

Query: 832  AGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSS 891
            A +E  K ++AK+VIKSLTAQLK MAE LP            SP+P   +S +  +  SS
Sbjct: 890  AADEAEKRKSAKEVIKSLTAQLKQMAEKLPE---------RRSPSP---ISGSITKHISS 937

Query: 892  PLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVE 951
                     N S+S   S+     +  S   +   H    +K++N           +WV 
Sbjct: 938  A-------QNISSSESHSSSDISPETDSNGNSSDHHMLYRSKSQN--------DKPQWVI 982

Query: 952  QDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARV 997
            Q E GVYITL +LPGG  +LKR+RFSRK F+E+QAE+WWA N  R 
Sbjct: 983  QAEPGVYITLSSLPGGTNELKRIRFSRKHFTEQQAEKWWAENGTRT 1028


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  951 bits (2459), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/1068 (50%), Positives = 693/1068 (64%), Gaps = 108/1068 (10%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +FQRY RPEK+Y SFSLIYND  RSLDLICKDK EAEVW  GLKALIS     + + +  
Sbjct: 77   VFQRYLRPEKDYLSFSLIYNDGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGW 136

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
            SD                         GG    DG D   L ++  S     + + +S  
Sbjct: 137  SD-------------------------GGLYLDDGRD---LTSNSASDSSISVTREISSP 168

Query: 124  -VLYAAPPKVLLPSESACGSVNS-LSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGS 181
             +  +  P +   S     S NS  S   SD     +KG   D FRVS+SSA S+SS GS
Sbjct: 169  DISVSFNPNISPRSSRPENSPNSDRSHVASDNTNMQVKGSGSDAFRVSVSSAPSTSSHGS 228

Query: 182  GHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACG 241
              DD D+LGDV+IWGE   D  +  G  ++ +Y   + D  +P+ +ES VVLDV +IACG
Sbjct: 229  APDDCDALGDVYIWGEVIYDNAVKIGADKNANYVSTRADVLLPRPLESNVVLDVHHIACG 288

Query: 242  GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
             RHAALVT+QGEVF+WGEE GGRLGHGV  DV  P+L+++L    V+ VACGE HTCAVT
Sbjct: 289  VRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVT 348

Query: 302  LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
            ++G++YTWG    N GLLGHGN++S W+PK+++GPLEG+ V+SV+CGPWHTA+VTS GQL
Sbjct: 349  MAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVASVTCGPWHTALVTSTGQL 408

Query: 362  FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            FTFGDGTFGVLGHGDR +V+ PREV+SL GLRT+ AACGVWHTAAVVEV+V + SSS+ S
Sbjct: 409  FTFGDGTFGVLGHGDRENVAYPREVESLSGLRTIAAACGVWHTAAVVEVIV-TQSSSSIS 467

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            SGKLFTWGDGD+ RLGHGDKE RL PTCV AL++ NF +++CGHSLTV LTT+GHV+ MG
Sbjct: 468  SGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAMG 527

Query: 482  SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            S VYGQLG+P A+GKLP  VE KL+   VEEIACG YHVAVLTSR EVYTWGKGANGRLG
Sbjct: 528  STVYGQLGNPYADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 587

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRK 601
            HGD +DR  P LVEALKD+ VK I CG ++TAAICLHK VSG +QS CS CR  F F RK
Sbjct: 588  HGDIEDRKAPILVEALKDRHVKYIACGANYTAAICLHKLVSGAEQSQCSSCRQAFGFTRK 647

Query: 602  RHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSS-SSHSTVSR 660
            RHNCYNCGLV+CH+CSS+K+ +A++APNP KPYRVCD+CF KL K ++ S+ +  ++V R
Sbjct: 648  RHNCYNCGLVHCHSCSSRKATRAALAPNPGKPYRVCDSCFVKLNKVSDASNHNRRNSVPR 707

Query: 661  RGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE-FNRTRGLPLPN 719
                N+   + ++  E  +S+S     ++M+ +K++++ ++K+ KK + F+  R    P+
Sbjct: 708  LSGENK---DRLDKAEIRLSKS--TLPSNMDLIKQLDTKAAKQGKKADTFSLVRSSQAPS 762

Query: 720  GVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSG 779
             +   + + +S           K     L  S + SR+ SP SRR SPPR+ TP PT SG
Sbjct: 763  LLQLKDVVFSS-----AIDLRAKVPKPVLTPSGVNSRSVSPFSRRPSPPRSATPVPTTSG 817

Query: 780  LASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEE 835
            L+  K V D  ++T+E    EVIKLRAQVE L ++   QE+EL+++ ++++EA+A+A EE
Sbjct: 818  LSFSKSVTDSLRKTNELLNQEVIKLRAQVESLKQRCDFQELELQKSAKKVQEAMALAAEE 877

Query: 836  TAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNS-------------NSFH---------- 872
            ++K +AAKDVIKSLTAQLKDMAE LP G   +              N  H          
Sbjct: 878  SSKSKAAKDVIKSLTAQLKDMAERLPPGVSDSENMKPAYLTNGLEPNGIHYVDANGERHS 937

Query: 873  ----------SSPT------------PAWDV-----SSAAIEQPSSPLTFQGAIPNGSNS 905
                      +SPT            PA+       ++   + P + L+  G + +  N 
Sbjct: 938  RSDSISLTSLASPTGNDSTLSNGAQGPAYSFRDSFPTNGRDDHPDARLSNGGGVQSSHN- 996

Query: 906  LILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGD-EWVEQDETGVYITLVAL 964
              +S G D  ++RS    E        ++++  + A   Q + EW+EQ E GVYITLVAL
Sbjct: 997  --VSEGVDGKESRSLQDGENG-----IRSRDSALAASSNQVEAEWIEQYEPGVYITLVAL 1049

Query: 965  PGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVS 1012
              G +DLKRVRFSR++F E QAE WW+ NR +VY++YNV   DKSSVS
Sbjct: 1050 RDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYEKYNVRGSDKSSVS 1097


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222790
            [Cucumis sativus]
          Length = 982

 Score =  950 bits (2455), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/1012 (53%), Positives = 675/1012 (66%), Gaps = 116/1012 (11%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            IFQ+YP+PEKEYQSFSL+YNDRSLDLICKDKDEAEVWF GLKALI+R ++RK R ESR +
Sbjct: 77   IFQQYPQPEKEYQSFSLLYNDRSLDLICKDKDEAEVWFVGLKALITRGNHRKWRVESRCE 136

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
             VSS   SP A  +R+SP  +P   G     DG+       SYE+  +N L KA S+ + 
Sbjct: 137  SVSS--DSPHARLRRNSPSITPCDPG---DLDGV-------SYENTGQNRLGKAFSELLS 184

Query: 126  YAAPPKVLLPSESACGSVN-SLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            Y A  K     +S    VN SLS+   D   G +    G  FRVSLSSAVSSSSQGS  +
Sbjct: 185  YTAVSKGTSQPKSI---VNPSLSTALIDNSNGRISASEG--FRVSLSSAVSSSSQGSCPE 239

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGV--KMDSFVPKAVESAVVLDVQNIACGG 242
            D D+LGDV+IWGE  GDG+LGGG+++ GS   +  K+D+ +PKA+ES VVLDV  IACGG
Sbjct: 240  DFDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGG 299

Query: 243  RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
            RHA LVT+QGE+FSWGEE GGRLGHGV++DVSHPK+ID L   NVELVACGE+HTCAVTL
Sbjct: 300  RHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTL 359

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            SGD+YTWG    N+GLLGHG+E+S W+P+K+ G +EGI VS +SCG WHTAVVTSAGQLF
Sbjct: 360  SGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLF 419

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV---MVGSSSSSN 419
            TFGDG+FG LGHGD I+ + PREV++L+GLRT + ACGVWHTAA VE    +  S +S++
Sbjct: 420  TFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSAS 479

Query: 420  CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
             SS KL+TWGDGD+GRLGHGD E RLVP CVAAL+E   CQV+CG+ LTVALTT G VYT
Sbjct: 480  PSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEERICQVACGNDLTVALTTAGRVYT 539

Query: 480  MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            MGS  YGQLG   ANGKLPT VEG++  +FVEE+ACG YHVAVLTS+ EVYTWGKG NG+
Sbjct: 540  MGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQ 599

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFK 599
            LGHGD + RN P++V+ LKDKQVK++ CG+ FT  IC+HKWVS  D S+CSGC  PF F+
Sbjct: 600  LGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVICIHKWVSSADHSVCSGCHNPFGFR 659

Query: 600  RKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVS 659
            RKRHNCYNCGLV+C  CSSKKS+KAS+APN  KPYRVCD+CF KL K  E+SS S +  +
Sbjct: 660  RKRHNCYNCGLVFCKACSSKKSLKASLAPNXKKPYRVCDDCFNKLKKIMESSSVSQNARA 719

Query: 660  RRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPN 719
            R G+++   N  V   E +V               K+++  S+                 
Sbjct: 720  RTGNIHYKSN-GVMDKETWVP--------------KLQATLSR----------------- 747

Query: 720  GVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSG 779
             +S   A+NN++S +                SR+ SRATSP    SSP R          
Sbjct: 748  -LSSFGAINNAESMH----------------SRLASRATSPVLGTSSPIR---------- 780

Query: 780  LASPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEE 835
              S +   +D+KR     ++E+I LRAQV+ELT KS+  E ELE+T+++L E  A+A +E
Sbjct: 781  --SSEDFSEDSKRANDTLTQEIISLRAQVQELTCKSKNLEAELEKTSKKLLEVTAIAADE 838

Query: 836  TAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTF 895
              KC++AK+VIKSL AQLK+MAE +P G     NS   +     +++  + E  S  +  
Sbjct: 839  AEKCKSAKEVIKSLAAQLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLSTESLSMSI-- 896

Query: 896  QGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDET 955
                    NS + SNG   G      QT ++  +A  +              EWV QDE 
Sbjct: 897  --------NSRLESNGISKG------QTLSTGIKALNEKA------------EWVVQDEP 930

Query: 956  GVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVD 1007
            GVYITL  LPGG  +LKRVRFSR+ F+E QAE+WWA   A+V +++ V   D
Sbjct: 931  GVYITLSTLPGGFNELKRVRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 982


>gi|296083842|emb|CBI24230.3| unnamed protein product [Vitis vinifera]
          Length = 953

 Score =  949 bits (2454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/732 (66%), Positives = 568/732 (77%), Gaps = 38/732 (5%)

Query: 322  GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
            G +M   LPK L   +  + V +++CG  H A+VT  G++F++G+ + G LGHG    V 
Sbjct: 227  GMKMDSLLPKALESAVV-LDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVL 285

Query: 382  TPREVDSLKGLRTVRAACGVWHTAAVV---------------------EVMVGSSSSSNC 420
             P+ +DSL        ACG +HT AV                      +     +++ NC
Sbjct: 286  HPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFVFQNPGKWSPSRATALNC 345

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            SSGKLFTWGDGD+GRLGHGDKEA+LVPTCVAALV+PNFC+V+CGHSLTVALTT+GHVYTM
Sbjct: 346  SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTM 405

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            GSPVYGQLG+P+A+GKLPTRVEGKL K+FVEEIACG YHVAVLTSRTEVYTWGKGANGRL
Sbjct: 406  GSPVYGQLGNPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRL 465

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKR 600
            GHGDTDDRN P+LVEALKDKQVKSI CGT+FTA ICLHKWVSGVDQSMCSGCR+PFNFKR
Sbjct: 466  GHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATICLHKWVSGVDQSMCSGCRLPFNFKR 525

Query: 601  KRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSR 660
            KRHNCYNCGLV+CH+CSSKKS+KASMAPNPNKPYRVCDNCF KL KA ET +SS S VSR
Sbjct: 526  KRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFSKLRKAIETDASSQSAVSR 585

Query: 661  RGSMNQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLP 718
            RG  NQG NE ++  E   SRS VQ    +SMESLK+ ES +SKRNKK EFN +R  P+P
Sbjct: 586  RGVTNQGLNELIDKDEKLDSRSRVQLARFSSMESLKQAESRTSKRNKKLEFNSSRVSPIP 645

Query: 719  NGVSQ-GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTL 777
            NG SQ G AL   KS NPVFGS+KKFFSAS+PGSRI+SR TSP SRR SPPRA TPTPTL
Sbjct: 646  NGGSQWGGAL---KSLNPVFGSSKKFFSASVPGSRIVSRTTSPISRRPSPPRAATPTPTL 702

Query: 778  SGLASPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAG 833
             GL SPKIVVDDAKRT    S+EVIKLR QVE LTRK+QLQE+ELERTT+QLKEA+A+AG
Sbjct: 703  EGLTSPKIVVDDAKRTNDSLSQEVIKLRVQVENLTRKAQLQEVELERTTKQLKEAIAIAG 762

Query: 834  EETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN-----SFHSSPTPAWDVSSAAIEQ 888
            EETA+C+AAK+VIKSLTAQLKDMAE LPVGA RN+      S  S+P  + D+SS +I++
Sbjct: 763  EETARCKAAKEVIKSLTAQLKDMAERLPVGAARNTKSPSFTSLGSNPASS-DLSSLSIDR 821

Query: 889  PSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDE 948
             +  +T Q    NGSN  +LSNGS   +NRS       H EAT +N +RT ++E    +E
Sbjct: 822  INGQITSQEPDLNGSNGQLLSNGSSTTNNRSSGHNRLGHLEATIRNGSRTKESEHRNDNE 881

Query: 949  WVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDK 1008
            WVEQDE GVYITL +LPGG+KDLKRVRFSRK+FSEKQAEQWWA NRARV+++YNV M+DK
Sbjct: 882  WVEQDEPGVYITLTSLPGGVKDLKRVRFSRKRFSEKQAEQWWAENRARVHERYNVRMIDK 941

Query: 1009 SSVSIGREGLAH 1020
            SSV +G E LAH
Sbjct: 942  SSVGVGSEDLAH 953



 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 202/462 (43%), Positives = 256/462 (55%), Gaps = 60/462 (12%)

Query: 5   PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRS-HYRKGRAESR 63
           PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWF+GLKALISR  H+RK R ESR
Sbjct: 77  PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRGGHHRKWRTESR 136

Query: 64  SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
           SD + S A SPR +T+RSSPL+SPFGS  S QKDG D L LH+ YESPPK+V++KA SD 
Sbjct: 137 SDGIPSEANSPRTYTRRSSPLNSPFGSADSLQKDGGDHLRLHSPYESPPKSVMEKAFSDV 196

Query: 124 VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFR-VSLSSAVSSSSQ--- 179
           +LYA PPK   PS+SA GSV+S        R G   G+  D+    +L SAV    Q   
Sbjct: 197 ILYAVPPKGFFPSDSASGSVHSFH------RVGSCFGMKMDSLLPKALESAVVLDVQNIA 250

Query: 180 -GSGHDD-GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQN 237
            G  H       G++F WGE +G G LG          GV  D   PK ++S    +++ 
Sbjct: 251 CGGRHAALVTKQGEIFSWGEESG-GRLG---------HGVDSDVLHPKLIDSLSNTNIEL 300

Query: 238 IACGGRHAALVT---------------------------------KQGEVFSWGEELGGR 264
           +ACG  H   VT                                   G++F+WG+   GR
Sbjct: 301 VACGEYHTCAVTLSGDLYTWGDGTYNFVFQNPGKWSPSRATALNCSSGKLFTWGDGDKGR 360

Query: 265 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 324
           LGHG       P  + AL + N   VACG   T A+T SG +YT G     +G LG+  +
Sbjct: 361 LGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSP--VYGQLGN-PQ 417

Query: 325 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 384
               LP ++ G L    V  ++CG +H AV+TS  +++T+G G  G LGHGD    ++P 
Sbjct: 418 ADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPT 477

Query: 385 EVDSLKGLRTVRAACGVWHTAAV-VEVMVGSSSSSNCSSGKL 425
            V++LK  +    ACG   TA + +   V     S CS  +L
Sbjct: 478 LVEALKDKQVKSIACGTNFTATICLHKWVSGVDQSMCSGCRL 519


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  944 bits (2440), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/1052 (53%), Positives = 714/1052 (67%), Gaps = 93/1052 (8%)

Query: 5    PIFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAES 62
            P+F RYPRP K  QSFSLIY+  +RSLDL   DKDEA+VWF GLKA ++ +  RK +  +
Sbjct: 76   PVFLRYPRPGKVCQSFSLIYSNEERSLDL---DKDEADVWFVGLKASVAGAQLRKSKLNN 132

Query: 63   RSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESP---PKNVLDKA 119
              + V S   +  +  + S  L+S FGS  + +++  D     +   SP    K  L  +
Sbjct: 133  -INHVGSTNATNHSLKRSSLSLTSRFGSFDNLRRESGDFFKTSSFIGSPLRSEKGYLGGS 191

Query: 120  LS--------DAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLS 171
            LS        DA            S  +      L   G+            D +R+S+S
Sbjct: 192  LSTVETKNNYDAGSVGGSMHSGSSSMGSDSVSAQLRLVGAG---------QSDNYRISMS 242

Query: 172  SAVSSSSQGSGH-DDG----DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKA 226
            SAVSSSSQ S H +DG    ++LGDV++WGE  GDGILGGG  R G+   + +D+ +PKA
Sbjct: 243  SAVSSSSQSSQHGEDGSHHAEALGDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKA 302

Query: 227  VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
            +ESA+VLDVQ +ACGG+HAALVTKQGEVF+WGEE GGRLGHGVD DVSHP+L++AL +  
Sbjct: 303  LESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASST 362

Query: 287  VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
             E+VACGE+H CAVTLSGD+YTWG    + GLLGHGN++S W+PK++NGPLE + V+S++
Sbjct: 363  TEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIA 422

Query: 347  CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            CGPWHTAVVT+AGQLFTFGDGTFGVLGH DR S  +PREV+SLKGLRTVRAACGVWHTAA
Sbjct: 423  CGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAA 482

Query: 407  VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
            VVEVMVGSSS+S+CSSGKLFTWGDGD+GRLGHGDKE RLVPTCVAALV+ NF +V+CGHS
Sbjct: 483  VVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHS 542

Query: 467  LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            LTVALTT G V+TMGS ++GQLGDP+A+GKLP  VEG+L   +VE+IACG +HVA +T +
Sbjct: 543  LTVALTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLK 602

Query: 527  TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQ 586
            +EVYTWGKGANGRLGHGD +DRN P+LVEALK+KQVKSI CG +FTAA+CLHKW+SG DQ
Sbjct: 603  SEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWLSGADQ 662

Query: 587  SMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTK 646
            + CSGCR PF+F RKRHNCYNCGLV+CH CSSKK++KAS+APNP KPYRVCD C  KL K
Sbjct: 663  NACSGCRQPFSFTRKRHNCYNCGLVFCHACSSKKALKASLAPNPGKPYRVCDPCCVKLRK 722

Query: 647  ATETSSSSHSTVSRRG--SMNQGF--NEAVEHGENFVSRSH----------VQFGTSMES 692
            A+E    + +++S+RG  S N+G    E    GE  V R            ++FG + E 
Sbjct: 723  ASEGGVGAGASLSKRGAPSRNRGMEVKEGSGKGEFRVPRPQAPNAGRPPITLEFGKAGEG 782

Query: 693  LKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN----SKSSNPVFGSTKK---FFS 745
               +     KR KK E + +R  P+PNG S G+        +  S P F  +       S
Sbjct: 783  KLGM-----KRGKKPENSSSRVSPVPNGTSGGSTWGAVSVPAGFSKPPFQPSLNGPLAIS 837

Query: 746  ASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLR 801
            +S+   R +SRA SP SRR+SPPR+TTPTPT SGLA PK VV+D K+T++    E I+LR
Sbjct: 838  SSVVSGRAVSRAVSPLSRRTSPPRSTTPTPTGSGLAIPKTVVEDLKKTNDTLSCENIQLR 897

Query: 802  AQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLP 861
            + +E L+R+ Q  + E +R+ +QL+ A+ +A EE+AK RAAK+VIKSLT QLK+MAE LP
Sbjct: 898  SHIESLSRELQRLDGEFQRSAQQLQNAVVMATEESAKSRAAKEVIKSLTTQLKEMAERLP 957

Query: 862  VGAVRNSNSFHSSPTPAW----DVSSAAIEQPSSPL------TFQGAIPNGSNSLILSNG 911
             G  +++ S   S          V +AA++   +P        FQ   PN S   I    
Sbjct: 958  QGGFKHARSVSLSLARLGVTNDAVDNAALDSLGTPCNERLGSVFQQCRPNMSTLNI---- 1013

Query: 912  SDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDL 971
                             EA     ++T+  E     EWVEQDE GVYITL ALP G KDL
Sbjct: 1014 --------------QDTEANGIANSQTLSPE----TEWVEQDEPGVYITLTALPEGGKDL 1055

Query: 972  KRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            +RVRFSRK+FSE++AEQWWA NR RV++QY V
Sbjct: 1056 RRVRFSRKRFSEREAEQWWAENRVRVHEQYQV 1087


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  934 bits (2414), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/1088 (48%), Positives = 693/1088 (63%), Gaps = 133/1088 (12%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +FQRY RPEK+Y SFSLIYN+  RSLDLICKDK EAEVW  GLKALIS     + + +  
Sbjct: 77   VFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGW 136

Query: 64   SD--------EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNV 115
            SD        +  +  +   +    +  +SSP  S G +     +      SY   P+N 
Sbjct: 137  SDGGLYFDDSKDLTSNSPSDSSVSATRDISSPEVSVGFNSNTSPN------SYR--PEN- 187

Query: 116  LDKALSDAVLYAAPPKVLLPSESACGSVNSLSSG-GSDGRTGHLKGLSGDTFRVSLSSAV 174
                       + PP+    S  A    N  + G GSD             FRVS+SSA 
Sbjct: 188  -----------SVPPE---RSHVALDHTNMQTKGSGSDA------------FRVSVSSAP 221

Query: 175  SSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
            S+SS GS  DD D+LGDV+IWGE   D ++  G  ++ +Y   + D  +PK +ES VVLD
Sbjct: 222  STSSHGSAPDDCDALGDVYIWGEVICDNLVKVGADKNANYLTTRADLLLPKPLESNVVLD 281

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            V +IACG RHAALVT+QGE+F+WGEE GGRLGHGV  DV  P+L+++L   +V+ VACGE
Sbjct: 282  VHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACGE 341

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
             HTCAVT++G+++TWG    N GLLGHG ++S W+PK+++GPLEG+ V+SV+CGPWHTA+
Sbjct: 342  FHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTAL 401

Query: 355  VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
            VT+  QLFTFGDGTFGVLGHGD+ +V+ PREV+SL GLRT+  ACGVWHTAAVVEV+V  
Sbjct: 402  VTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 461

Query: 415  SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            SS+S  SSGKLFTWGDGD+ RLGHGDKE RL PTCV AL+E NF +V+CGHSLTV LTT+
Sbjct: 462  SSAS-VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTS 520

Query: 475  GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            G V TMGS VYGQLG+P+++GKLP  VE KL    VEEIACG YHVAVLTSR EVYTWGK
Sbjct: 521  GQVCTMGSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGK 580

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRI 594
            GANGRLGHGD +DR  P+LVE LKD+ VK I CG+++TAAICLHKWVSG +QS CS CR 
Sbjct: 581  GANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTCRQ 640

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSS 654
             F F RKRHNCYNCGLV+CH+CSS+K+++A++APNP KPYRVCD+C+ KL K  E ++++
Sbjct: 641  AFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCYTKLNKVLEAAANN 700

Query: 655  -HSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE-FNRT 712
              +TV R    N+   + ++  E  +S+S +   ++++ +K+++S ++K+ KK + F+  
Sbjct: 701  RRTTVPRLSGENK---DRLDKAEIRLSKSAMP--SNLDLIKQLDSKAAKQGKKADTFSLV 755

Query: 713  RGLPLP----NGVSQGNALNNSKS-SNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSP 767
            R    P      V   +A++  ++   P+           L  S + SR+ SP SR+ SP
Sbjct: 756  RPSQAPLLQLKDVVLFSAVDLRRTVPRPI-----------LTPSGVSSRSVSPFSRKPSP 804

Query: 768  PRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTR 823
            PR+ TP PT SGL+  K + D  K+T+E    EV+KLR QVE L  + +LQE+EL+++ +
Sbjct: 805  PRSATPVPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQVESLRERCELQELELQKSAK 864

Query: 824  QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR-------------NSNS 870
            +++EA+ VA EE+AK +AAK+VIKSLTAQLKDMAE LP G                  N 
Sbjct: 865  KVQEAMVVATEESAKSKAAKEVIKSLTAQLKDMAERLPPGVYDAECMRPAYLLNGLEPNG 924

Query: 871  FH--------------------SSPTPAWDV----SSAAIEQPSSPLTFQGAIPNGSNSL 906
             H                    +SPT  +      +  + +    PL    A P   N  
Sbjct: 925  IHYPDSNGERHSRSDSINGSCLASPTGTYSAVINGTQGSTQLMRDPLGTNEANPYQQNLG 984

Query: 907  ILS-------------NGSDFGDNRSPSQTEASHC---------EATTKNKNRTMKAEPA 944
            +L+             NG       S S +EA  C         E  TK++N T+     
Sbjct: 985  LLTSNVRDENPDIGMPNGGGGVRTSSSSVSEAVGCKDSGPLQDGEGGTKSRNSTLSDNSQ 1044

Query: 945  QGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVS 1004
               EW+EQ E GVYITLVAL  G +DLKRVRFSR++F E QAE WW+ NR +VY++YNV 
Sbjct: 1045 VEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAENWWSENREKVYERYNVR 1104

Query: 1005 MVDKSSVS 1012
              DKSSVS
Sbjct: 1105 GSDKSSVS 1112


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  925 bits (2391), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/1077 (48%), Positives = 693/1077 (64%), Gaps = 113/1077 (10%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +FQRY RPEK+Y SFSLIY++  RSLDLIC+DK EAEVW  GLKALI+     + + +  
Sbjct: 78   VFQRYLRPEKDYLSFSLIYSNGKRSLDLICRDKVEAEVWIAGLKALIASGQGGRSKIDGW 137

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
            SD    +    R  T  +  +S    S G    D    + +     SP     D  +S+ 
Sbjct: 138  SDG-GLILNDSRDLTSNNPSVSLASTSRGICSPD----ISVTLPNTSPKSFRSDNTISER 192

Query: 124  VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGH 183
                APP                     D     +KG + D FRVS+SSA S+SS GS  
Sbjct: 193  --SHAPP---------------------DPTNMQVKGSASDVFRVSVSSAPSTSSHGSAP 229

Query: 184  DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
            DD D+LGDV+IWGE T + +  G   ++ +Y   + D  +P+ +ES+VVLDV +IACG R
Sbjct: 230  DDCDALGDVYIWGEVTCENVKVGA-DKNVNYVSPRADVLLPRPLESSVVLDVHHIACGVR 288

Query: 244  HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            HA+LVT+QGEVF+WGEE GG LGHGV  +V  P+L++AL +  V+ VACGE H+CAVT++
Sbjct: 289  HASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTMA 348

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            G++YTWG    N GLLGHG+++S W+PK++ GPLEG+ ++ V+CGPWHTA+VTS GQLFT
Sbjct: 349  GELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAFVACGPWHTALVTSTGQLFT 408

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            FGDGTFGVLGHGDR +VS PREV+SL GLRT+  ACGVWHTAAVVEV + + SS++ SSG
Sbjct: 409  FGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEV-IATHSSTSISSG 467

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            KLFTWGDGD+ RLGHGDKEARL PTCVAAL++ NF +++CGHSLT  LT +G V+TMGS 
Sbjct: 468  KLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFHKIACGHSLTAGLTKSGRVFTMGST 527

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            VYGQLG+P+++GK+P  V  K+ +  +EEIACG YHVAVLTS+ EVYTWGKGANGRLGHG
Sbjct: 528  VYGQLGNPQSDGKVPCLVGDKIARESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHG 587

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            D +DR  P+LVEALKD+ VK I CG++++AAICLHKWVSG +QS CS CR  F F RKRH
Sbjct: 588  DIEDRKTPALVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAFGFTRKRH 647

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCYNCGLV+CH+CSS+K+++A+ APNP KPYRVCD+C+ KL K  E S+S+     RR +
Sbjct: 648  NCYNCGLVHCHSCSSRKALRAAHAPNPGKPYRVCDSCYAKLNKVAEASNSN-----RRNA 702

Query: 664  MNQGFNEAVEHGENFVSR-SHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            + +   E  +  +    R S     ++M+ +K+++S ++K+ KK +   T  L  P   S
Sbjct: 703  LPRLSGENKDRLDKSDLRLSKAVIHSNMDLIKQLDSKAAKQGKKGD---TFSLVHP---S 756

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLP-----GSRIMSRATSPTSRRSSPPRATTPTPTL 777
            Q  +L   K    V  S+      ++P      S + SR+ SP SRR SPPR+ TP PT 
Sbjct: 757  QPPSLLQLKD---VVLSSALDLRRTVPRPVVAPSGVSSRSVSPFSRRPSPPRSATPIPTT 813

Query: 778  SGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAG 833
            SGLA  K + D  K+T+E    EV KL AQVE L ++ +LQE+EL+R+ +  +EA+A+A 
Sbjct: 814  SGLAFSKSISDSLKKTNELLNQEVQKLHAQVESLRQRCELQELELQRSAKNTQEAMALAA 873

Query: 834  EETAKCRAAKDVIKSLTAQLKDMAEMLPVGA-------------------VRNSNSFHSS 874
            EE+AKC+AAK+VIKSLTAQLKD+AE LP G                    +R+ +S    
Sbjct: 874  EESAKCKAAKEVIKSLTAQLKDLAEKLPPGVYDAENVRPAYLPNGIEPNGIRHPDSNGEQ 933

Query: 875  PTPAWDVSSAAI--------------------------EQPSSPLTFQGA-------IPN 901
             + A  +S++++                          +Q  SP++  GA       +PN
Sbjct: 934  HSRAESISASSLASMGLESALLNRTAGNSPGTYGTNPHQQIRSPVSSNGANNYPDVKLPN 993

Query: 902  GSNSLILSNG--SDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGD-EWVEQDETGVY 958
               ++  S+G  SD  D R        + ++  K ++    A+  Q + EW+EQ E GVY
Sbjct: 994  RGGAIQASSGNVSDTADGRDSGNFH--NGDSGLKLRSVAPAADSNQVEAEWIEQYEPGVY 1051

Query: 959  ITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIGR 1015
            ITLVAL  G +DLKRVRFSR++F E QAE WW+ NR +VY++YNV   DKS+    R
Sbjct: 1052 ITLVALSDGTRDLKRVRFSRRRFGEHQAETWWSENRDKVYERYNVRSTDKSANQAAR 1108


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score =  925 bits (2390), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/1060 (48%), Positives = 687/1060 (64%), Gaps = 92/1060 (8%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +FQRY RPEK+Y SFSLIYN+  RSLDLICKDK EAEVW  GLKALI      + + +  
Sbjct: 77   VFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLKALIISGQGGRSKIDGW 136

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLD--PLHLHTSYESPPKNVLDKALS 121
            SD                         GG    DG D  P     S  S  +++    +S
Sbjct: 137  SD-------------------------GGLYLDDGRDLTPNSASDSSVSISRDISSPEVS 171

Query: 122  DAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGS 181
                    PK      S     + ++S  ++ +   +KG   D FRVS+SSA S+SS GS
Sbjct: 172  VNFNPNTSPKNFQLESSPHSDRSHVASENTNMQ---VKGSGSDAFRVSVSSAPSTSSHGS 228

Query: 182  GHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACG 241
              DD D+LGDV++WGE   D  +  G  ++ +Y   + D  +P+ +ES VVLDV +IACG
Sbjct: 229  APDDCDALGDVYVWGEIICDNAVKVGADKNATYLSTRADVLLPRPLESNVVLDVHHIACG 288

Query: 242  GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
             RHAA+VT+QGEVF+WGEE GGRLGHGV  DV  P+L+++L    V+ +ACGE HTCAVT
Sbjct: 289  FRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVT 348

Query: 302  LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
            ++G++YTWG      GLLGHG ++S W+PK+++GPLEG+ V+SV+CGPWHTA+VTS GQL
Sbjct: 349  MAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVASVTCGPWHTALVTSTGQL 408

Query: 362  FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            FTFGDGTFGVLGHG+R +++ P+EV+SL GLRT+  ACGVWHTAAVVEV+V + SSS+ S
Sbjct: 409  FTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGVWHTAAVVEVIV-TQSSSSVS 467

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            SGKLFTWGDGD+ RLGHGDKE RL PTCV AL++ NF +++CGHSLTV LTT+GHV+TMG
Sbjct: 468  SGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFHKIACGHSLTVGLTTSGHVFTMG 527

Query: 482  SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            S VYGQLG+P A+GK+P  VE KL+   VEEIACG YHVAVLTSR EVYTWGKGANGRLG
Sbjct: 528  STVYGQLGNPYADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 587

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRK 601
            HGD +DR  P+LVEALKDK VK I CG +++AAICLHKWVSG +QS CS CR  F F RK
Sbjct: 588  HGDGEDRKTPTLVEALKDKHVKYIACGANYSAAICLHKWVSGSEQSQCSSCRQAFGFTRK 647

Query: 602  RHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRR 661
            RHNCYNCGLV+CH+CSS+K+ +A++APNP+KPYRVCD+CF KL K ++ S+++      R
Sbjct: 648  RHNCYNCGLVHCHSCSSRKATRAALAPNPSKPYRVCDSCFTKLNKVSDASNTNRRNAGPR 707

Query: 662  GSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE-FNRTRGLPLPNG 720
             S      + ++  +  +S+  +   ++++ +K+++S ++K+ KK + F+       P+ 
Sbjct: 708  LSGEN--KDRLDKADLRLSK--LTLPSNLDLIKQLDSKAAKQGKKADTFSLVWSSQAPSL 763

Query: 721  VSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGL 780
            +   + + +S           K     L  S + SR+ SP SRR SPPR+ TP PT SGL
Sbjct: 764  LQLKDVVLSS-----TIDLRPKVPKPVLTPSGVSSRSVSPFSRRPSPPRSATPVPTTSGL 818

Query: 781  ASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEET 836
            +  K + D  K+T+E    EV+KLR QVE L ++ + QE EL+++ ++++EA+AVA EE+
Sbjct: 819  SFSKSIADSLKKTNELLNQEVLKLRTQVESLRQRCEFQESELQKSAKKVQEAMAVAAEES 878

Query: 837  AKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTP------------------- 877
            AK +AAKDV+KSLTAQLKDMAE LP G V ++ S   +  P                   
Sbjct: 879  AKSKAAKDVMKSLTAQLKDMAERLPPG-VYDTESMRPAYVPNGLETNGIHFPDANGKRHS 937

Query: 878  -AWDVSSAAIEQPS--SPLTFQGAI-----------PNGSNS---LILSNGSDFGDNRSP 920
             +  +S  ++  P+    ++  G +            NG +    + LSNG       S 
Sbjct: 938  RSDSISGTSLASPTRVDSISINGTLGITQSLRDSPGANGRDDHPDVRLSNGGAQPSCNSV 997

Query: 921  SQTEASHCEATTKNKNRTMKAEP----AQGD----EWVEQDETGVYITLVALPGGLKDLK 972
            S+  A     + ++    MK+      A G+    EW+EQ E GVYITLV+L  G +DLK
Sbjct: 998  SEAVAGKEPRSPQDGENGMKSRDSSLVANGNHVEAEWIEQYEPGVYITLVSLRDGTRDLK 1057

Query: 973  RVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVS 1012
            RVRFSR++F E QAE WW+ NR +VY++YNV   DKSSVS
Sbjct: 1058 RVRFSRRRFGEHQAETWWSENREKVYEKYNVRGSDKSSVS 1097


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  924 bits (2389), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/1076 (48%), Positives = 687/1076 (63%), Gaps = 132/1076 (12%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +FQRY RPEK+Y SFSLIYN+  RSLDLICKDK E EVW  GLKALIS            
Sbjct: 77   VFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEVEVWIAGLKALISS----------- 125

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDP--LHLHTSYE------SPPKNV 115
                                     G GG S+ DG     LHL  S +      S     
Sbjct: 126  -------------------------GQGGRSKIDGWSDGGLHLDDSRDLTSNSPSESSVS 160

Query: 116  LDKALSDAVLYAAPPKVLLPSESACGSVN-SLSSGGSDGRTGHLKGLSGDTFRVSLSSAV 174
              + LS   +Y +       S  +  ++N   S   S+     +KG S D FRVS+SSA 
Sbjct: 161  ASRDLSSPDVYVSLANTSPHSFHSENTLNFERSHAPSNPSNMQVKGSSSDVFRVSVSSAP 220

Query: 175  SSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
            S+SS GS  DD D+LGDV+IWGE   + ++  G  +S SY   + D  +P+ +ES VVLD
Sbjct: 221  STSSHGSAPDDYDALGDVYIWGEVICENVVKVGAEKSASYFSPRTDILLPRPLESNVVLD 280

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            V  IACG +HAALVT+QGE+F+WGEE GGRLGHGV  +V  P+L++A+ +  V+ VACGE
Sbjct: 281  VLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPRLVEAMASTTVDFVACGE 340

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
             HTCAVT++G++YTWG    N GLLGHG ++S W+PK++ GPLEG+ V+ V+CGPWHTA+
Sbjct: 341  FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHTAL 400

Query: 355  VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +TS GQLFTFGDGTFGVLGHGDR +VS PREV+SL GLRT+  ACGVWHTAA++EV+V  
Sbjct: 401  ITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAIIEVIVTQ 460

Query: 415  SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            SS+S  SSGKLFTWGDGD+ RLGHGDK+ARL PTCV +L+E NF +++CGHSLTV LTT+
Sbjct: 461  SSAS-VSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRIACGHSLTVGLTTS 519

Query: 475  GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            G V+TMGS VYGQLG+P+++GKLP  VE K     VEEIACG YHVAVLTS+ EV+TWGK
Sbjct: 520  GRVFTMGSTVYGQLGNPQSDGKLPCLVEDKFAGESVEEIACGAYHVAVLTSKNEVFTWGK 579

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRI 594
            GANGRLGHGD +DR  P+LVEALKD+ VK I CG+++++AICLHKWVSG +QS CS CR 
Sbjct: 580  GANGRLGHGDVEDRKSPTLVEALKDRHVKYIACGSNYSSAICLHKWVSGAEQSQCSACRQ 639

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSS 654
             F F RKRHNCYNCGLV+CH+CSS+K+++A++APNP KPYRVCD+CF KL K  E  ++ 
Sbjct: 640  AFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCFVKLNKVAELGNN- 698

Query: 655  HSTVSRRGSMNQ--GFN-EAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE-FN 710
                +RR +M +  G N + +E  E  ++++ V   ++M+ +K+++S ++K+ KK + F+
Sbjct: 699  ----NRRNAMPRLSGENKDRLEKPELRLTKTAVP--SNMDLIKQLDSKAAKQGKKADTFS 752

Query: 711  RTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIM-----SRATSPTSRRS 765
              R        SQ  +L   K    V  ST      + P   +      SR+ SP SRR 
Sbjct: 753  LVR-------TSQPQSLLQLKD---VVLSTAIDLKRTAPRPVLTSSGVSSRSVSPFSRRP 802

Query: 766  SPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERT 821
            SPPR+ TP PT SGL+  K + D  K+T+E    EV+KLR QVE L ++ +LQE+EL+R+
Sbjct: 803  SPPRSATPIPTTSGLSFSKSITDSLKKTNELLNQEVLKLRGQVETLRQRCELQELELQRS 862

Query: 822  TRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN------------ 869
            T++ +EA+AVA EE+AK +AAK+VIKSLTAQLK+++E LP GA    N            
Sbjct: 863  TKKAQEAMAVAAEESAKSKAAKEVIKSLTAQLKNLSERLPPGAYDAENIRPAYLPNGLEP 922

Query: 870  ----------SFHSSPTPAWDVSSAAIEQPSSPLT-FQGAIPN--GSNSL------ILSN 910
                        H+        S A+I   SS +    G +P   G+N        + SN
Sbjct: 923  NGIRYPDLNGEHHTRAESISGSSLASIGLESSLMNRTDGTLPGSYGANHYQQNRGSVTSN 982

Query: 911  GSDFGDNR---------SPSQTEASHC-------------EATTKNKNRTMKAEPAQGD- 947
            G+D   N           PS +  S               E+  +++N  + A   Q + 
Sbjct: 983  GTDDYPNVKLPNGSGMIQPSSSTVSDTVDGGRDSGDFQDDESGLRSRNAIVPANSNQVEA 1042

Query: 948  EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            EW+EQ E GVYITLVAL  G +DLKRVRFSR++F E QAE WW+ NR RVY++YNV
Sbjct: 1043 EWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENRDRVYKRYNV 1098


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  913 bits (2360), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/1077 (48%), Positives = 679/1077 (63%), Gaps = 113/1077 (10%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +FQRY RPEK+Y SFSLIY++  RSLDLICKDK EAEVW  GLKALIS     + + +  
Sbjct: 78   VFQRYLRPEKDYLSFSLIYSNGKRSLDLICKDKAEAEVWIAGLKALISSGQGGRSKIDGW 137

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
            SD                         GG    D  D   L ++  S       + +S  
Sbjct: 138  SD-------------------------GGLILNDSRD---LTSNSPSESSASTSRGISSP 169

Query: 124  VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGH 183
             + +  P     S     +++  S    D     +KG + D FRVS+SSA S+SS GS  
Sbjct: 170  DISSTLPNTSPKSYRPDNTISERSHASPDPTNMQVKGSASDVFRVSVSSAPSTSSHGSAP 229

Query: 184  DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
            DD D+L DV+IWGE T + +  G   ++ +Y   + D  +P+ +ES VVLDV +IACG R
Sbjct: 230  DDYDALWDVYIWGEVTCENVKVGA-DKNVNYFSPRADVLLPRPLESNVVLDVHHIACGVR 288

Query: 244  HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            HA+LVT+QGEVF+WGEE GGRLGHGV  +V  P+L++AL +  ++ VACGE H+CAVT++
Sbjct: 289  HASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALISTTIDFVACGEFHSCAVTMA 348

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            G++YTWG    N GLLGHG+ +S W+PK++ GPLEG+ ++ V+CGPWHTA++TS GQLFT
Sbjct: 349  GELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQIAFVACGPWHTALITSTGQLFT 408

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            FGDGTFGVLGHGDR +VS PREV+SL GLRT+  ACGVWHTAAVVEV + + S ++ SSG
Sbjct: 409  FGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEV-IATHSGTSISSG 467

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            KLFTWGDGD+ RLGHGDKEARL PTCV+AL++ NF +++CGHSLTV LTT+G V+TMGS 
Sbjct: 468  KLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGST 527

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            VYGQLG   ++GK+P  V  K+    +EEIACG YHVAVLTS+ EVYTWGKGANGRLGHG
Sbjct: 528  VYGQLGSSLSDGKVPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHG 587

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            D +DR  P+LVEALKD+ VK I CG++++AAICLHKWVSG +QS CS CR  F F RKRH
Sbjct: 588  DIEDRKTPALVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAFGFTRKRH 647

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCYNCGLV+CH+CSS+K+++A+ APNP KPYRVCD+C+ KL K  E  +S     +RR +
Sbjct: 648  NCYNCGLVHCHSCSSRKALRAAHAPNPGKPYRVCDSCYAKLNKVAEACNS-----NRRNA 702

Query: 664  MNQGFNEAVEHGENFVSR-SHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            + +   E  +  +    R S     ++M+ +K+++S ++K+ KK +   T  L  P   S
Sbjct: 703  LPRLSGENKDRLDKSDLRLSKAVIPSNMDLIKQLDSKAAKQGKKGD---TFSLIRP---S 756

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLP-----GSRIMSRATSPTSRRSSPPRATTPTPTL 777
            Q  +L   K    V  ST      ++P      S + SR+ SP SRRSSPPR+ TP PT 
Sbjct: 757  QPPSLLQLKD---VVLSTALDLRRTVPRPVVAPSGVSSRSVSPFSRRSSPPRSATPIPTT 813

Query: 778  SGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAG 833
            SGL+  K + D  K+T+E    EV KL AQVE L ++ +LQE+EL+R+ ++ +EA A+A 
Sbjct: 814  SGLSFSKSISDSLKKTNELLNQEVQKLHAQVESLRQRCELQELELQRSAKKTQEATALAA 873

Query: 834  EETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN------------------------ 869
            EE+ K +AAK+VIKSLTAQLKD+AE LP G     N                        
Sbjct: 874  EESGKSKAAKEVIKSLTAQLKDLAEKLPPGVYDAENIRPAYLPNGLEPNGIHNPDSNGEQ 933

Query: 870  -----SFHSSPTPAWDVSSAAIEQPS----------------SPLTFQGA-------IPN 901
                 S   S   +  + SA + + +                SP++  G        +PN
Sbjct: 934  HSRAESIIGSSLDSMGLESALLNKTAGNSPGTYGTNLHQKIRSPVSSNGTNNYPGVKLPN 993

Query: 902  GSNSLILSNG--SDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGD-EWVEQDETGVY 958
            G   +  S+G  SD  D R          E+  K++N    A+  Q + EW+EQ E GVY
Sbjct: 994  GGGVIQASSGTVSDTADGRDSGNFHDD--ESGLKSRNAAPTADGNQVEAEWIEQYEPGVY 1051

Query: 959  ITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIGR 1015
            ITLVAL  G +DLKRVRFSR++F E QAE WW+ NR RVY++YNV   DKS+    R
Sbjct: 1052 ITLVALHDGTRDLKRVRFSRRRFGEHQAETWWSENRDRVYERYNVRSTDKSANQAAR 1108


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  911 bits (2355), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/1091 (47%), Positives = 685/1091 (62%), Gaps = 149/1091 (13%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +F+RY RPEK+Y SFSLIYN+  RSLDLICKDK EAE W +GLKALI+            
Sbjct: 77   VFERYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEAWISGLKALIAS----------- 125

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDP--LHLHTSYE------------ 109
                                     G GG S+ DG     L+L    E            
Sbjct: 126  -------------------------GQGGRSKIDGWSDGGLYLDEGCELTSNSPSDSSHS 160

Query: 110  -----SPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGD 164
                 S P+  +    + ++  + P   +   E A  S+N  +          +KG S D
Sbjct: 161  VNRDNSSPEFFVSYNANISLKTSQPENNIAKLERAHVSLNQTNM--------QVKGSSSD 212

Query: 165  TFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVP 224
              RVS+SSA S+SS GS  DD D+LGDV+IWGE  GD I+  G  ++ SY  ++ D  +P
Sbjct: 213  VMRVSVSSAPSTSSHGSAPDDCDALGDVYIWGEIVGDNIVKIGAEKNSSYVTLRTDVLLP 272

Query: 225  KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN 284
            + +ES +VLD+ +IACG RHAALVT+QGEVF+WGEE GGRLGHGV  DV  P+++++L  
Sbjct: 273  RPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLAA 332

Query: 285  INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 344
             ++  VACGE HTCAVT++G++YTWG    N GLLGHG+++S W+PK+++GPLEG+ V+S
Sbjct: 333  SSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTS 392

Query: 345  VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
            V+CGPWHTA+VTS GQLFTFGDGTFG LGHGDR ++S P+EV+SL GLRT+  ACGVWHT
Sbjct: 393  VTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRTIAVACGVWHT 452

Query: 405  AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
            AAVVEV+V + SSS+ SSGKLFTWGDGD+ RLGHGDKE RL PTCV AL++ +F +V+CG
Sbjct: 453  AAVVEVIV-TQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHKVACG 511

Query: 465  HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
            HS+TV LTT+G V++MGS VYGQLG+P A+GK+P  VE KL    VEE++CG YHV VLT
Sbjct: 512  HSITVGLTTSGQVFSMGSTVYGQLGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLT 571

Query: 525  SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGV 584
            S+ EVYTWGKGANGRLGHGD +DR  P+LVEALKD+ VK I CG+++TAAICLHKWVS  
Sbjct: 572  SKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYTAAICLHKWVSSA 631

Query: 585  DQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKL 644
            +QS CS CR  F F RKRHNCYNCGLV+CH+CSS+K+++A++APNP K YRVCD+C+ KL
Sbjct: 632  EQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKLYRVCDSCYTKL 691

Query: 645  TKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRN 704
             KA E  +++      R S      + ++  +  +S+S     ++++ +K++++ ++K+ 
Sbjct: 692  MKAAEAINNNRKNAMPRLSGEN--KDRIDKTDMKISKS---VPSNLDLIKQLDNKAAKQG 746

Query: 705  KKQE-FNRTRGLPLPN-----GVSQGNALNNSKSS-NPVFGSTKKFFSASLPGSRIMSRA 757
            KK + F+  R    P+      V    A++  +++  PV           L  S + SR+
Sbjct: 747  KKADTFSLVRSSQAPSLLQLRDVVLSTAVDLRRTAPKPV-----------LTASGVSSRS 795

Query: 758  TSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQL 813
             SP SR+ SPPR+ TP PT SGL+  K + D  K+T++    EV+KLR+QVE L +K +L
Sbjct: 796  VSPFSRKPSPPRSATPVPTASGLSFSKSITDSLKKTNDLLNHEVLKLRSQVESLRQKCEL 855

Query: 814  QEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGA--------- 864
            QE EL+++ ++ +EA+A+A EE+ K +AAK+VIK LTAQLKDMAE LP G          
Sbjct: 856  QEQELQKSLKKTREAMALAAEESGKSKAAKEVIKLLTAQLKDMAERLPPGVYDAEKMRSL 915

Query: 865  -----VRNSNSFH-------------------SSPTPAWDVSSAAIEQPSSPLTFQGAIP 900
                 + ++  +H                   +SPT     S AA  Q S   T      
Sbjct: 916  HLSNGLESNGGYHLSMNGERHSRSDSVSSYSCASPT----ASEAAAWQGSYGTTHSYREL 971

Query: 901  NGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQ-GD------------ 947
            +G+N     +  D  D+R P+   A    ++         +E  Q GD            
Sbjct: 972  SGTNDSAHQDRIDSRDSRLPNSGGAHPVSSSASVAAVGKDSESLQDGDNNSKAKTSPLVN 1031

Query: 948  ------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 1001
                  EW+EQ E GVYITLVAL  G +DLKRVRFSR++F E QAE WW+ NR +VY++Y
Sbjct: 1032 ATQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAENWWSENREKVYERY 1091

Query: 1002 NVSMVDKSSVS 1012
            NV   DKSSVS
Sbjct: 1092 NVRNSDKSSVS 1102


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  906 bits (2342), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/1013 (50%), Positives = 660/1013 (65%), Gaps = 136/1013 (13%)

Query: 7    FQRYPRPEKEYQSFSLIY----NDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAES 62
            FQRYPRPEKEYQSFSLIY     +RSLDLICKDKDEAEVWF GLKA +S +  R  + ++
Sbjct: 79   FQRYPRPEKEYQSFSLIYGSGGEERSLDLICKDKDEAEVWFVGLKARVSSN--RTLKVDN 136

Query: 63   RSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSD 122
            +S+   S   SP     R SPL+S                  + S+   P        S 
Sbjct: 137  KSEGTLSDVNSPLGRALRDSPLNS------------------YDSFNRSPYG------SP 172

Query: 123  AVLYAAPPKVLLPSESA-CGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGS 181
            ++   A    L   ESA   S+ S  S  + GR+  L     D FRVS+SSAVSSSSQGS
Sbjct: 173  SLFKTASTGELQSVESAKSDSLASEESLNAQGRSVSL----ADAFRVSMSSAVSSSSQGS 228

Query: 182  GHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACG 241
            G +D D+LGDVFIWGE  G+G LGGG+ +  S AG ++DS VPKA+++AVVLDV +IACG
Sbjct: 229  GPEDSDALGDVFIWGEGAGEGFLGGGVCKLTSGAGSRVDSLVPKALQAAVVLDVSSIACG 288

Query: 242  GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
             RHAALVTKQG+VF WGEE GGRLGHG+D DVS P+L+ AL  +N ELVACG+ HTCAVT
Sbjct: 289  SRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNTELVACGDFHTCAVT 348

Query: 302  LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
            LSG++YTWG    + GL+GH N +S W+PK+++ PLEG+ +SS++CG WHTA+V+SAGQL
Sbjct: 349  LSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSIACGAWHTALVSSAGQL 408

Query: 362  FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            FTFGDGTFGVLGHGD+ +++ P+EV+SLKGL+TVRAACG+WHTAAVVEV+VG SS+++CS
Sbjct: 409  FTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCS 468

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            SGKLFTWGDGD+ RLGHGDKE +LVPTCVAALV+ NF QV+CGHSLTVALTT+G V+TMG
Sbjct: 469  SGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMG 528

Query: 482  SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            S +YGQLG+PKA+GK+P  V+G+L + FVEEI CG +HVA L+S+TE+YTWGKGANGRLG
Sbjct: 529  STIYGQLGNPKADGKVPGMVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLG 588

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRK 601
            HGD +DR  P+LVEAL+DKQVK++ CG+SFTA ICLHK VS  DQS+CSGC+  F F RK
Sbjct: 589  HGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVICLHKPVSDADQSVCSGCKQAFGFTRK 648

Query: 602  RHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRR 661
            RHNCYNCGL YCH+CSSKK+ +AS+APNP+K YRVC+ C  KL +      S+   V+R+
Sbjct: 649  RHNCYNCGLAYCHSCSSKKAFRASLAPNPSKAYRVCEPCLAKLER------SASEEVARK 702

Query: 662  GSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGV 721
                    E          R  ++    +E  +    G+S+            + +P  +
Sbjct: 703  SRKYMDGRE----------RPLIRASKPIEMKQVGYYGNSRNTDDFAAKHQTVINIPTAI 752

Query: 722  SQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLA 781
             +  A+                                  S + SPPR+ TPTPT +GLA
Sbjct: 753  PERKAV----------------------------------SAKPSPPRSATPTPTSAGLA 778

Query: 782  SPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETA 837
             P    D+ ++  E    EV+ L+ Q+  LT K + +E EL R  ++++EA+ +AGEETA
Sbjct: 779  PPGNGPDELQKKLELSRQEVLHLKTQISTLTSKYEQRERELRRGAQKVQEAVLLAGEETA 838

Query: 838  KCRAAKDVIKSLTAQLKDMAEMLPVG-------AVRNSNSFHSSPTPAWDVSSAAIEQPS 890
            KCRAAK+VIKSLT +LK++AE +P          V N   F   P P  ++    +   +
Sbjct: 839  KCRAAKEVIKSLTVELKELAERMPSARRQQQRQEVPNGRHF---PAPEAEID---LRLQT 892

Query: 891  SPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWV 950
            SP +   A     + L+L +G                                   +EWV
Sbjct: 893  SPTSSNSATDTTVDKLVLGSGP----------------------------------EEWV 918

Query: 951  EQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            EQD+ GVYITL   PGG +DLKRVRFSR++FSEK+AEQWW  NR RV+QQY++
Sbjct: 919  EQDQAGVYITLALAPGGGRDLKRVRFSRRRFSEKEAEQWWQDNRVRVHQQYSI 971


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  905 bits (2340), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/1013 (50%), Positives = 660/1013 (65%), Gaps = 136/1013 (13%)

Query: 7    FQRYPRPEKEYQSFSLIY----NDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAES 62
            FQRYPRPEKEYQSFSLIY     +RSLDLICKDKDEAEVWF GLKA +S +  R  + ++
Sbjct: 88   FQRYPRPEKEYQSFSLIYGSGGEERSLDLICKDKDEAEVWFVGLKARVSSN--RTLKVDN 145

Query: 63   RSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSD 122
            +S+   S   SP     R SPL+S                  + S+   P        S 
Sbjct: 146  KSEGTLSDVNSPLGRALRDSPLNS------------------YDSFNRSPYG------SP 181

Query: 123  AVLYAAPPKVLLPSESA-CGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGS 181
            ++   A    L   ESA   S+ S  S  + GR+  L     D FRVS+SSAVSSSSQGS
Sbjct: 182  SLFKTASTGELQSVESAKSDSLASEESLNAQGRSVSL----ADAFRVSMSSAVSSSSQGS 237

Query: 182  GHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACG 241
            G +D D+LGDVFIWGE  G+G LGGG+ +  S AG ++DS VPKA+++AVVLDV +IACG
Sbjct: 238  GPEDSDALGDVFIWGEGAGEGFLGGGVCKLTSGAGSRVDSLVPKALQAAVVLDVSSIACG 297

Query: 242  GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
             RHAALVTKQG+VF WGEE GGRLGHG+D DVS P+L+ AL  +N ELVACG+ HTCAVT
Sbjct: 298  SRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNAELVACGDFHTCAVT 357

Query: 302  LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
            LSG++YTWG    + GL+GH N +S W+PK+++ PLEG+ +SS++CG WHTA+V+SAGQL
Sbjct: 358  LSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSIACGAWHTALVSSAGQL 417

Query: 362  FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            FTFGDGTFGVLGHGD+ +++ P+EV+SLKGL+TVRAACG+WHTAAVVEV+VG SS+++CS
Sbjct: 418  FTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCS 477

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            SGKLFTWGDGD+ RLGHGDKE +LVPTCVAALV+ NF QV+CGHSLTVALTT+G V+TMG
Sbjct: 478  SGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMG 537

Query: 482  SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            S +YGQLG+PKA+GK+P  V+G+L + FVEEI CG +HVA L+S+TE+YTWGKGANGRLG
Sbjct: 538  STIYGQLGNPKADGKVPGMVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLG 597

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRK 601
            HGD +DR  P+LVEAL+DKQVK++ CG+SFTA ICLHK VS  DQS+CSGC+  F F RK
Sbjct: 598  HGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVICLHKPVSDADQSVCSGCKQAFGFTRK 657

Query: 602  RHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRR 661
            RHNCYNCGL YCH+CSSKK+ +AS+APNP+K YRVC+ C  KL +      S+   V+R+
Sbjct: 658  RHNCYNCGLAYCHSCSSKKAFRASLAPNPSKAYRVCEPCLAKLER------SASEEVARK 711

Query: 662  GSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGV 721
                    E          R  ++    +E  +    G+S+            + +P  +
Sbjct: 712  SRKYMDGRE----------RPLIRASKPIEMKQVGYYGNSRNTDDFAAKHQTVINIPTAI 761

Query: 722  SQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLA 781
             +  A+                                  S + SPPR+ TPTPT +GLA
Sbjct: 762  PERKAV----------------------------------SAKPSPPRSATPTPTSAGLA 787

Query: 782  SPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETA 837
             P    D+ ++  E    EV+ L+ Q+  LT K + +E EL R  ++++EA+ +AGEETA
Sbjct: 788  PPGNGPDELQKKLELSRQEVLHLKTQISTLTSKYEQRERELRRGAQKVQEAVLLAGEETA 847

Query: 838  KCRAAKDVIKSLTAQLKDMAEMLPVG-------AVRNSNSFHSSPTPAWDVSSAAIEQPS 890
            KCRAAK+VIKSLT +LK++AE +P          V N   F   P P  ++    +   +
Sbjct: 848  KCRAAKEVIKSLTVELKELAERMPSARRQQQRQEVPNGRHF---PAPEAEID---LRLQT 901

Query: 891  SPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWV 950
            SP +   A     + L+L +G                                   +EWV
Sbjct: 902  SPTSSNSATDTTVDKLVLGSGP----------------------------------EEWV 927

Query: 951  EQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            EQD+ GVYITL   PGG +DLKRVRFSR++FSEK+AEQWW  NR RV+QQY++
Sbjct: 928  EQDQAGVYITLALAPGGGRDLKRVRFSRRRFSEKEAEQWWQDNRVRVHQQYSI 980


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1083

 Score =  902 bits (2331), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/1048 (49%), Positives = 687/1048 (65%), Gaps = 91/1048 (8%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDR--SLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +FQRY RP+K+Y SFSLIY++R  +LDLICKDK EAEVW  GLKALIS    R  + +  
Sbjct: 77   VFQRYLRPDKDYLSFSLIYSNRKRTLDLICKDKVEAEVWIAGLKALISGQAGRS-KIDGW 135

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
            SD   S+A S      R   LSSP  S   + +D       +   E+P  +         
Sbjct: 136  SDGGLSIADS------RDLTLSSPTNSSVCASRD-------YNIAETPYNST-------- 174

Query: 124  VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGH 183
                A P+    S +     +  S   SD     ++G   D FRVS+SS  SSSS GS  
Sbjct: 175  ----AFPRT---SRTENSVSSERSHVASDSPNMLVRGPGSDVFRVSVSSVQSSSSHGSAP 227

Query: 184  DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
            DD D+LGDV+IWGE   D +   G  ++ +  G + D  +PK +ES VVLDV +IACG R
Sbjct: 228  DDCDALGDVYIWGEVLCDNVAKFGAEKNATCVGSRSDVLIPKPLESNVVLDVHHIACGVR 287

Query: 244  HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            HAALV++QGEVF+WGE  GGRLGHG+  DV+ P+LI++L   +V+ VACGE HTCAVT++
Sbjct: 288  HAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMT 347

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            G++YTWG    N GLLGHG ++S W+PK+++GPLEG+ ++SVSCGPWHTA++TS GQLFT
Sbjct: 348  GEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFT 407

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            FGDGTFGVLGHGD+ +V  PREV+SL GLRT+  ACGVWH AA+VEV+V  S+SS  SSG
Sbjct: 408  FGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSS-ISSG 466

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            KLFTWGDGD+ RLGHGDKE+RL PTCV+AL++  F +V+CGHSLTV LTT+G VYTMGS 
Sbjct: 467  KLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGST 526

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            VYGQLG+P A+GKLP  VE KL K+ VEEIACG YHVAVLTSR EV+TWGKGANGRLGHG
Sbjct: 527  VYGQLGNPNADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHG 586

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            D +DR  PSLV+ LK++ VK+I CG++FTAAICLHKWVSG +QS CS CR  F F RKRH
Sbjct: 587  DIEDRKAPSLVDTLKERHVKNIACGSNFTAAICLHKWVSGTEQSQCSACRQAFGFTRKRH 646

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCYNCGLV+CH+CSSKKS+KA++APNP KPYRVCD+C+ KL+K +E S+ S   +  R S
Sbjct: 647  NCYNCGLVHCHSCSSKKSLKAALAPNPGKPYRVCDSCYSKLSKVSEASTDSRKNIMPRLS 706

Query: 664  MNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE---FNRTRGLPLPNG 720
                  + ++  E  +++S +   ++++ +++++S ++++ KK +     RT   PL   
Sbjct: 707  GEN--KDRLDKAEIRLAKSGIP--SNIDLIRQLDSRAARQGKKADTFSLVRTSQTPL--- 759

Query: 721  VSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGL 780
                +AL N      V    +     ++  S   SR+ SP SRRSSPPR+ TP P  +GL
Sbjct: 760  TQLRDALTN------VADLRRGPPKPAVTPSGASSRSVSPFSRRSSPPRSVTPIPLTAGL 813

Query: 781  ASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEET 836
                 + +  K+T+E    EV+KLRAQ E L  + ++QE E++++ +++KEA+ +A EE+
Sbjct: 814  GFSTSIAESLKKTNELLNQEVVKLRAQAESLRHRCEVQEFEVQKSVKKVKEAMNLAAEES 873

Query: 837  AKCRAAKDVIKSLTAQLKDMAEMLPVGA-----VRNSNSFHSSPTPAWDVSSAAIEQPS- 890
            AK  AAK+VIKSLTAQ+KD+A +LP GA      R +N  +      +   +A  ++ S 
Sbjct: 874  AKSEAAKEVIKSLTAQVKDIAALLPPGAYKAETTRTANLLNGFEQNGFHFGNANGQRQSR 933

Query: 891  ------SPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPA 944
                  + L    A+P  S + +  N      ++SP  T+AS  E  ++   R       
Sbjct: 934  SDSISDTSLASPMALPARSMNGLWRN------SQSPRNTDASMGELLSEGV-RISNGFSE 986

Query: 945  QGD--------------------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEK 984
             GD                    EW+EQ E GVYITL+AL  G +DLKRVRFSR++F E+
Sbjct: 987  DGDNRRNSRSSAASASNASQVEAEWIEQYEPGVYITLLALGDGTRDLKRVRFSRRRFREQ 1046

Query: 985  QAEQWWAANRARVYQQYNVSMVDKSSVS 1012
            QAE WW+ NR RVY++YN+   D+SSV+
Sbjct: 1047 QAEAWWSENRERVYEKYNIRGTDRSSVA 1074


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  898 bits (2321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/1053 (49%), Positives = 689/1053 (65%), Gaps = 87/1053 (8%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +FQRY RPEK+Y SFSL+YN   +SLDLICKDK EAE+W  GLK LIS     + + +  
Sbjct: 77   VFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLKTLISTGQGGRSKIDGW 136

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
            S    SV  S      R    SSP  S  S+ +    P          P N    A   +
Sbjct: 137  SGGGLSVDAS------RDLTSSSPSSSSASASRGHSSP--------GTPFNFDPVASPKS 182

Query: 124  VLYAAPPKVLLPSESACGSVNSLSS-GGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSG 182
            V    PP     S  A  + N  +   GSDG            FRVS+SSA SSSS GS 
Sbjct: 183  VEPEVPPTDTEKSHVALDNKNMQTKVSGSDG------------FRVSVSSAQSSSSHGSA 230

Query: 183  HDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGG 242
             DD D+LGDV+IWGE   D ++  GI ++ SY   + D  VPK +ES +VLDV  IACG 
Sbjct: 231  ADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQIACGV 290

Query: 243  RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAVT 301
            RHAA VT+QGE+F+WGEE GGRLGHG+  DV HP+L+++L   + V+ VACGE HTCAVT
Sbjct: 291  RHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVT 350

Query: 302  LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
            L+G++YTWG    N GLLGHG+++S W+PK++ G LEG+HV+SV+CGPWHTA++TS G+L
Sbjct: 351  LAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGPWHTALITSYGRL 410

Query: 362  FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            FTFGDGTFGVLGHGDR +V  PREV+SL GLRT+  +CGVWHTAAVVE++V  S+SS+ S
Sbjct: 411  FTFGDGTFGVLGHGDRETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVS 470

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            SGKLFTWGDGD+ RLGHGDK+ RL PTCV AL++ NF +++CGHSLTV LTT+G V+TMG
Sbjct: 471  SGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMG 530

Query: 482  SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            S VYGQLG+ + +GKLP  VE KL   FVEEI+CG YHVA LTSR EVYTWGKGANGRLG
Sbjct: 531  STVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLG 590

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRK 601
            HGD +DR  P+LVEALKD+ VK I CG+++TAAICLHKWVSG +QS CS CR+ F F RK
Sbjct: 591  HGDLEDRKVPTLVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTCRLAFGFTRK 650

Query: 602  RHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSS--HSTVS 659
            RHNCYNCGLV+CH+CSSKK+ +A++AP+  + YRVCD+C+ KL+K +E + ++  +S V 
Sbjct: 651  RHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSCYVKLSKVSEINDTNRRNSVVP 710

Query: 660  RRGSMNQGFNEAVEHGENFVSRSHVQFGTS-MESLKKVESGSSKRNKKQE-FNRTRGLPL 717
            R    N+   + ++  E  +++    FGTS M+ +K+++S ++K+ KK + F+  R   L
Sbjct: 711  RLSGENK---DRLDKSEIRLAK----FGTSNMDLIKQLDSKAAKQGKKTDTFSLGRNSQL 763

Query: 718  PNGVSQGNALNNSKSSNPVFGSTKKFFSASLPG-SRIMSRATSPTSRRSSPPRATTPTPT 776
            P+ +   +A+ ++       G  ++      P  S I SR+ SP SRRSSPPR+ TP P+
Sbjct: 764  PSLLQLKDAVQSN------IGDMRRATPKLAPAPSGISSRSVSPFSRRSSPPRSATPMPS 817

Query: 777  LSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVA 832
             SGL  P  + D+ K+T+E    E++KLR QV+ LT+K +LQE+EL+ + ++ +EALA+A
Sbjct: 818  TSGLYFPVGIADNMKKTNEILNQEIVKLRTQVDSLTQKCELQEVELQNSVKKTQEALALA 877

Query: 833  GEETAKCRAAKDVIKSLTAQLKDMAEMLPVG------AVRN---SNSFHSSPT----PAW 879
             EE+AK RAAK+ IKSL AQLKD+AE LP G       ++N    N FH        P+ 
Sbjct: 878  EEESAKSRAAKEAIKSLIAQLKDVAEKLPPGESLKLACLQNGFDQNGFHFPEENGFHPSR 937

Query: 880  DVSSAAIEQPSSPLTFQGAIPNGSNSLILS-----NGSDFGDNRSPSQTEASHCEATTKN 934
              S ++     +P  F  A  N S S + S       S+  +N  P+    S   +    
Sbjct: 938  SESMSSSISSVAPFDF--AFANASWSNLQSPKQTPRASERNNNACPADPRLSSSGSVISE 995

Query: 935  KNRTMKAEPAQGD---------------EWVEQDETGVYITLVALPGGLKDLKRVRFSRK 979
            +N   + +    +               EW+EQ E GVYITLVAL  G +DL+RVRFSR+
Sbjct: 996  RNEPFQFQNNSDNGSSQTGVNNTNQVEAEWIEQYEPGVYITLVALHDGTRDLRRVRFSRR 1055

Query: 980  KFSEKQAEQWWAANRARVYQQYNVSMVDKSSVS 1012
            +F E QAE WW+ NR +VY++YNV + +K++ S
Sbjct: 1056 RFGEHQAETWWSENREKVYEKYNVRVSEKATAS 1088


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
            finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
            finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  897 bits (2319), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/1049 (48%), Positives = 684/1049 (65%), Gaps = 98/1049 (9%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDR--SLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +FQRY RP+K+Y SFSLIY++R  +LDLICKDK EAEVW  GLKALIS    R  + +  
Sbjct: 72   VFQRYLRPDKDYLSFSLIYSNRKRTLDLICKDKVEAEVWIAGLKALISGQAGRS-KIDGW 130

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
            SD   S+A S      R   LSSP  S   + +D       + S   P  +  + ++S  
Sbjct: 131  SDGGLSIADS------RDLTLSSPTNSSVCASRDFNIADSPYNSTNFPRTSRTENSVSSE 184

Query: 124  VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGH 183
              + A                      SD     ++G   D FRVS+SS  SSSS GS  
Sbjct: 185  RSHVA----------------------SDSPNMLVRGTGSDAFRVSVSSVQSSSSHGSAP 222

Query: 184  DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
            DD D+LGDV+IWGE   + +   G  ++  Y G + D  +PK +ES VVLDV +IACG +
Sbjct: 223  DDCDALGDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVK 282

Query: 244  HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            HAALV++QGEVF+WGE  GGRLGHG+  DV+ P+LI++L   +++ VACGE HTCAVT++
Sbjct: 283  HAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMT 342

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            G++YTWG    N GLLGHG ++S W+PK+++GPLEG+ ++SVSCGPWHTA++TS GQLFT
Sbjct: 343  GEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFT 402

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            FGDGTFGVLGHGD+ +V  PREV+SL GLRT+  ACGVWH AA+VEV+V + SSS+ SSG
Sbjct: 403  FGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIV-THSSSSVSSG 461

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            KLFTWGDGD+ RLGHGDKE RL PTCV+AL++  F +V+CGHSLTV LTT+G VYTMGS 
Sbjct: 462  KLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGST 521

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            VYGQLG+P A+GKLP  VE KLTK+ VEEIACG YHVAVLTSR EV+TWGKGANGRLGHG
Sbjct: 522  VYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHG 581

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            D +DR  P+LV+ALK++ VK+I CG++FTAAICLHKWVSG +QS CS CR  F F RKRH
Sbjct: 582  DVEDRKAPTLVDALKERHVKNIACGSNFTAAICLHKWVSGTEQSQCSACRQAFGFTRKRH 641

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCYNCGLV+CH+CSSKKS+KA++APNP KPYRVCD+C  KL+K +E +  S   V  R S
Sbjct: 642  NCYNCGLVHCHSCSSKKSLKAALAPNPGKPYRVCDSCHSKLSKVSEANIDSRKNVMPRLS 701

Query: 664  MNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE---FNRTRGLPLPNG 720
                  + ++  E  +++S +   ++++ +K++++ ++++ KK +     RT   PL   
Sbjct: 702  GEN--KDRLDKTEIRLAKSGIP--SNIDLIKQLDNRAARQGKKADTFSLVRTSQTPL--- 754

Query: 721  VSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGL 780
                +AL N   ++   G  K    A  P S   SR  SP SRRSSPPR+ TP P   GL
Sbjct: 755  TQLKDALTN--VADLRRGPPK---PAVTPSS---SRPVSPFSRRSSPPRSVTPIPLNVGL 806

Query: 781  ASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEET 836
                 + +  K+T+E    EV++LRAQ E L  + ++QE E++++ ++++EA+++A EE+
Sbjct: 807  GFSTSIAESLKKTNELLNQEVVRLRAQAESLRHRCEVQEFEVQKSVKKVQEAMSLAAEES 866

Query: 837  AKCRAAKDVIKSLTAQLKDMAEMLPVGA-----VRNSNSFHSSPTPAWDVSSAAIEQPS- 890
            AK  AAK+VIKSLTAQ+KD+A +LP GA      R +N  +      +  ++A  ++ S 
Sbjct: 867  AKSEAAKEVIKSLTAQVKDIAALLPPGAYEAETTRTANLLNGFEQNGFHFTNANGQRQSR 926

Query: 891  ----------SPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMK 940
                      SPL       NG           + +++SP  T+AS  E  ++   R   
Sbjct: 927  SDSMSDTSLASPLAMPARSMNGL----------WRNSQSPRNTDASMGELLSEGV-RISN 975

Query: 941  AEPAQGD-----------------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSE 983
                 G                  EW+EQ E GVYITL+AL  G +DLKRVRFSR++F E
Sbjct: 976  GFSEDGRNSRSSAASASNASQVEAEWIEQYEPGVYITLLALGDGTRDLKRVRFSRRRFRE 1035

Query: 984  KQAEQWWAANRARVYQQYNVSMVDKSSVS 1012
            +QAE WW+ NR RVY++YN+   D+SSV+
Sbjct: 1036 QQAETWWSENRERVYEKYNIRGTDRSSVA 1064


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
            domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
            domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score =  897 bits (2318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/1064 (48%), Positives = 699/1064 (65%), Gaps = 109/1064 (10%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAE-- 61
            +FQRY RPEK+Y SFSL+YN   +SLDLICKDK EAE+W  GLK LIS     + + +  
Sbjct: 77   VFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLKTLISTGQGGRSKIDGW 136

Query: 62   ---------SRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPP 112
                     SR    SS ++S  + ++  S   +PF          +DP+       + P
Sbjct: 137  SGGGLSVDASRELTSSSPSSSSASASRGHSSPGTPFN---------IDPI-------TSP 180

Query: 113  KNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSS 172
            K             +A P+V  P++S    V        D +    K    D FRVS+SS
Sbjct: 181  K-------------SAEPEVP-PTDSEKSHV------ALDNKNMQTKVSGSDGFRVSVSS 220

Query: 173  AVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
            A SSSS GS  DD D+LGDV+IWGE   D ++  GI ++ SY   + D  VPK +ES +V
Sbjct: 221  AQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIV 280

Query: 233  LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVA 291
            LDV  IACG RHAA VT+QGE+F+WGEE GGRLGHG+  DV HP+L+++L   + V+ VA
Sbjct: 281  LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVA 340

Query: 292  CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
            CGE HTCAVTL+G++YTWG    N GLLGHG+++S W+PK++ G LEG+HV+SVSCGPWH
Sbjct: 341  CGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWH 400

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            TA++TS G+LFTFGDGTFGVLGHGD+ +V  PREV+SL GLRT+  +CGVWHTAAVVE++
Sbjct: 401  TALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEII 460

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
            V  S+SS+ SSGKLFTWGDGD+ RLGHGDK+ RL PTCV AL++ NF +++CGHSLTV L
Sbjct: 461  VTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGL 520

Query: 472  TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
            TT+G V+TMGS VYGQLG+ + +GKLP  VE KL   FVEEI+CG YHVA LTSR EVYT
Sbjct: 521  TTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYT 580

Query: 532  WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSG 591
            WGKGANGRLGHGD +DR  P++VEALKD+ VK I CG+++TAAICLHKWVSG +QS CS 
Sbjct: 581  WGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCST 640

Query: 592  CRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETS 651
            CR+ F F RKRHNCYNCGLV+CH+CSSKK+ +A++AP+  + YRVCD+C+ KL+K +E +
Sbjct: 641  CRLAFGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSCYVKLSKVSEIN 700

Query: 652  SSS--HSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTS-MESLKKVESGSSKRNKKQE 708
             ++  +S V R    N+   + ++  E  +++    FGTS M+ +K+++S ++K+ KK +
Sbjct: 701  DTNRRNSAVPRLSGENR---DRLDKSEIRLAK----FGTSNMDLIKQLDSKAAKQGKKTD 753

Query: 709  -FNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSP 767
             F+  R   LP+ +   +A+ ++     +  +T K   A    S I SR+ SP SRRSSP
Sbjct: 754  TFSLGRNSQLPSLLQLKDAVQSNIGD--MRRATPKLAQAP---SGISSRSVSPFSRRSSP 808

Query: 768  PRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTR 823
            PR+ TP P+ SGL  P  + D+ K+T+E    E++KLR QV+ LT+K + QE+EL+ + +
Sbjct: 809  PRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQVDSLTQKCEFQEVELQNSVK 868

Query: 824  QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVG------AVRN---------- 867
            + +EALA+A EE+AK RAAK+ IKSL AQLKD+AE LP G       ++N          
Sbjct: 869  KTQEALALAEEESAKSRAAKEAIKSLIAQLKDVAEKLPPGESVKLACLQNGLDQNGFHFP 928

Query: 868  -SNSFHSSPTPA------------WDVSSAAIEQPSSPLTFQGAIPNGSNSL-----ILS 909
              N FH S + +            +  ++A+     SP     A    SN+      + S
Sbjct: 929  EENGFHPSRSESMTSSISSVAPFDFAFANASWSNLQSPKQTPRASERNSNAYPADPRLSS 988

Query: 910  NGSDFGDNRSPSQTEASHCEATTKNK-NRTMKAEPAQGDEWVEQDETGVYITLVALPGGL 968
            +GS   +   P Q + +    +++   N T + E     EW+EQ E GVYITLVAL  G 
Sbjct: 989  SGSVISERIEPFQFQNNSDNGSSQTGVNNTNQVEA----EWIEQYEPGVYITLVALHDGT 1044

Query: 969  KDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVS 1012
            +DL+RVRFSR++F E QAE WW+ NR +VY++YNV + +KS+ S
Sbjct: 1045 RDLRRVRFSRRRFGEHQAETWWSENREKVYEKYNVRVSEKSTAS 1088


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/1032 (50%), Positives = 667/1032 (64%), Gaps = 92/1032 (8%)

Query: 6    IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            IFQ+YPRPEKEYQSFSLI NDRSLDLICKDKDEAEVW TGLKA+I+R   RKG+ ++RS+
Sbjct: 99   IFQQYPRPEKEYQSFSLICNDRSLDLICKDKDEAEVWITGLKAIITRGRSRKGKYDARSE 158

Query: 66   EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
             V S   SP  H QR +  +S    G + +             ES P++ L KA +D + 
Sbjct: 159  TVFS--DSP--HGQRVTTSTSSIDQGDNQRT------------ESLPQSRLGKAYADIIQ 202

Query: 126  YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
            Y A  K     E+   +++SLS+G  D    + +  + DTFRVSLSSA+SSSSQGS  +D
Sbjct: 203  YTAAGKSPTLVETGSFNLSSLSAGAVD--NSNARSSTADTFRVSLSSALSSSSQGSCLED 260

Query: 186  GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
             D+LGDVFIWGE TG+G+LGGG HR G  +G ++D+  PK++ES+VVLDVQNI+CG RHA
Sbjct: 261  FDNLGDVFIWGEGTGNGLLGGGKHRIGKSSGTRIDANTPKSLESSVVLDVQNISCGNRHA 320

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
             LVTKQGE FSWGEE GGRLGHG ++DVSHPKLI   K +NVEL+ACGE+H+CAVT SGD
Sbjct: 321  MLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVTSSGD 380

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +YTWG    + GLLGH +E S W+PKK+ G +EG+ VS VSCGPWHTA++TSAG+LFTFG
Sbjct: 381  LYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITSAGRLFTFG 440

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG-SSSSSNCSSGK 424
            DGTFG LGHGDR    TPREV++  GL+T++ ACGVWHTAAVVE+M G  S  S+  SG 
Sbjct: 441  DGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGT 500

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            LFTWGDGD+G+LGHGD + RL P C+ ALV+ +F +V+C +++TVALTTTG VYTMGS V
Sbjct: 501  LFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNV 560

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            YGQLG P ANG  P  VE  L  + VEEI+CG +HVAVLTSRTEVYTWGKG NG+LGHGD
Sbjct: 561  YGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGD 620

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
             +++  P+LV+ L+DKQVK IVCG++F+AAIC+H W    D S+C GCRIPFNF+RKRHN
Sbjct: 621  CENKCTPTLVDILRDKQVKRIVCGSNFSAAICVHNWALSADNSICFGCRIPFNFRRKRHN 680

Query: 605  CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
            CYNCG V+C  CSSKKS+KAS+AP+ +KPYRVCD+C+ KL KA E+   S     + G+ 
Sbjct: 681  CYNCGFVFCKACSSKKSLKASLAPSTSKPYRVCDDCYDKLQKAIESEPFSRVPKVKAGNA 740

Query: 665  NQGFNEAVEHGENF-VSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
                +E  +    F +   H    +S +S  + +   S+ ++ +  NR       N   +
Sbjct: 741  LYKASEQTDKESGFPLLVGHTSRLSSSDSFNRAQGRISRVDQYE--NRASSFQNENPPRE 798

Query: 724  GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
              +L  SKS    F  +K  FSASLP +R++ ++TSP   ++S   +  P P    + + 
Sbjct: 799  SFSL--SKSPISAFRVSKSLFSASLPSTRVVPQSTSPLLGKASALWSAIPAP-YPPVRTA 855

Query: 784  KIVVDDAK----RTSEEVIKLRAQ------------------------------VEELTR 809
            ++VVD+ K      S+EV +L+AQ                              +EEL  
Sbjct: 856  EVVVDNLKPINDSLSQEVKQLKAQLEAMLLGLFKNANGIRDGCGIKSEESAQLRLEELAS 915

Query: 810  KSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN 869
            KSQL E EL R T+QL +A A A  E  K RAAK VIKSLTAQLK++ E LP   +  SN
Sbjct: 916  KSQLLEAELGRKTKQLMDATAKAAVEAEKRRAAKHVIKSLTAQLKEVTERLPEEQISTSN 975

Query: 870  -SFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHC 928
              F+             +EQ S    F    P        SNG      +  + T  + C
Sbjct: 976  LDFN-------------VEQTS----FNRTRP--------SNG------KCVTTTTLTEC 1004

Query: 929  EATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQ 988
              ++ N   + K    Q  E + Q E GVY+ L++LP G  +LKRV FSRK FSE +AE+
Sbjct: 1005 SGSS-NTVVSAKKSRGQKPERMLQVEPGVYLYLISLPDGGNELKRVHFSRKCFSEDEAEK 1063

Query: 989  WWAANRARVYQQ 1000
            WW  N  ++ ++
Sbjct: 1064 WWNENGQKICEK 1075


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/1066 (48%), Positives = 701/1066 (65%), Gaps = 113/1066 (10%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAE-- 61
            +FQRY RPEK+Y SFSL+YN   +SLDLICKDK EAE+W  GLK LIS    + GR++  
Sbjct: 77   VFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLKTLISTG--QGGRSKIN 134

Query: 62   -----------SRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYES 110
                       SR    SS ++S  + ++  S   +PF          +DP+       +
Sbjct: 135  GWSGGGLSVDASRELTSSSPSSSSASASRGHSSPGTPFN---------IDPI-------T 178

Query: 111  PPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSL 170
             PK             +A P+V  P++S    V        D +    K    D FRVS+
Sbjct: 179  SPK-------------SAEPEVP-PTDSEKSHV------ALDNKNMQTKVSGSDGFRVSV 218

Query: 171  SSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESA 230
            SSA SSSS GS  DD D+LGDV+IWGE   D ++  GI ++ SY   + D  VPK +ES 
Sbjct: 219  SSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESN 278

Query: 231  VVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VEL 289
            +VLDV  IACG RHAA VT+QGE+F+WGEE GGRLGHG+  DV HP+L+++L   + V+ 
Sbjct: 279  IVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDF 338

Query: 290  VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
            VACGE HTCAVTL+G++YTWG    N GLLGHG+++S W+PK++ G LEG+HV+SVSCGP
Sbjct: 339  VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 350  WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            WHTA++TS G+LFTFGDGTFGVLGHGD+ +V  PREV+SL GLRT+  +CGVWHTAAVVE
Sbjct: 399  WHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVE 458

Query: 410  VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
            ++V  S+SS+ SSGKLFTWGDGD+ RLGHGDK+ RL PTCV AL++ NF +++CGHSLTV
Sbjct: 459  IIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTV 518

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
             LTT+G V+TMGS VYGQLG+ + +GKLP  VE KL   FVEEI+CG YHVA LTSR EV
Sbjct: 519  GLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEV 578

Query: 530  YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMC 589
            YTWGKGANGRLGHGD +DR  P++VEALKD+ VK I CG+++TAAICLHKWVSG +QS C
Sbjct: 579  YTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQC 638

Query: 590  SGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATE 649
            S CR+ F F RKRHNCYNCGLV+CH+CSSKK+ +A++AP+  + YRVCD+C+ KL+K +E
Sbjct: 639  STCRLAFGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSCYVKLSKVSE 698

Query: 650  TSSSS--HSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTS-MESLKKVESGSSKRNKK 706
             + ++  +S V R    N+   + ++  E  +++    FGTS M+ +K+++S ++K+ KK
Sbjct: 699  INDTNRRNSAVPRLSGENR---DRLDKSEIRLAK----FGTSNMDLIKQLDSKAAKQGKK 751

Query: 707  QE-FNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRS 765
             + F+  R   LP+ +   +A+ ++     +  +T K   A    S I SR+ SP SRRS
Sbjct: 752  TDTFSLGRNSQLPSLLQLKDAVQSNIGD--MRRATPKLAQAP---SGISSRSVSPFSRRS 806

Query: 766  SPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERT 821
            SPPR+ TP P+ SGL  P  + D+ K+T+E    E++KLR QV+ LT+K + QE+EL+ +
Sbjct: 807  SPPRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQVDSLTQKCEFQEVELQNS 866

Query: 822  TRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVG------AVRN-------- 867
             ++ +EALA+A EE+AK RAAK+ IKSL AQLKD+AE LP G       ++N        
Sbjct: 867  VKKTQEALALAEEESAKSRAAKEAIKSLIAQLKDVAEKLPPGESVKLACLQNGLDQNGFH 926

Query: 868  ---SNSFHSSPTPA------------WDVSSAAIEQPSSPLTFQGAIPNGSNSL-----I 907
                N FH S + +            +  ++A+     SP     A    SN+      +
Sbjct: 927  FPEENGFHPSRSESMTSSISSVAPFDFAFANASWSNLQSPKQTPRASERNSNAYPADPRL 986

Query: 908  LSNGSDFGDNRSPSQTEASHCEATTKNK-NRTMKAEPAQGDEWVEQDETGVYITLVALPG 966
             S+GS   +   P Q + +    +++   N T + E     EW+EQ E GVYITLVAL  
Sbjct: 987  SSSGSVISERIEPFQFQNNSDNGSSQTGVNNTNQVEA----EWIEQYEPGVYITLVALHD 1042

Query: 967  GLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVS 1012
            G +DL+RVRFSR++F E QAE WW+ NR +VY++YNV + +KS+ S
Sbjct: 1043 GTRDLRRVRFSRRRFGEHQAETWWSENREKVYEKYNVRVSEKSTAS 1088


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation motifs
            [Arabidopsis thaliana]
          Length = 1108

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/1064 (48%), Positives = 699/1064 (65%), Gaps = 109/1064 (10%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAE-- 61
            +FQRY RPEK+Y SFSL+YN   +SLDLICKDK EAE+W  GLK LIS     + + +  
Sbjct: 82   VFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLKTLISTGQGGRSKIDGW 141

Query: 62   ---------SRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPP 112
                     SR    SS ++S  + ++  S   +PF          +DP+       + P
Sbjct: 142  SGGGLSVDASRELTSSSPSSSSASASRGHSSPGTPFN---------IDPI-------TSP 185

Query: 113  KNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSS 172
            K             +A P+V  P++S    V        D +    K    D FRVS+SS
Sbjct: 186  K-------------SAEPEVP-PTDSEKSHV------ALDNKNMQTKVSGSDGFRVSVSS 225

Query: 173  AVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
            A SSSS GS  DD D+LGDV+IWGE   D ++  GI ++ SY   + D  VPK +ES +V
Sbjct: 226  AQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIV 285

Query: 233  LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVA 291
            LDV  IACG RHAA VT+QGE+F+WGEE GGRLGHG+  DV HP+L+++L   + V+ VA
Sbjct: 286  LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVA 345

Query: 292  CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
            CGE HTCAVTL+G++YTWG    N GLLGHG+++S W+PK++ G LEG+HV+SVSCGPWH
Sbjct: 346  CGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWH 405

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            TA++TS G+LFTFGDGTFGVLGHGD+ +V  PREV+SL GLRT+  +CGVWHTAAVVE++
Sbjct: 406  TALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEII 465

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
            V  S+SS+ SSGKLFTWGDGD+ RLGHGDK+ RL PTCV AL++ NF +++CGHSLTV L
Sbjct: 466  VTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGL 525

Query: 472  TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
            TT+G V+TMGS VYGQLG+ + +GKLP  VE KL   FVEEI+CG YHVA LTSR EVYT
Sbjct: 526  TTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYT 585

Query: 532  WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSG 591
            WGKGANGRLGHGD +DR  P++VEALKD+ VK I CG+++TAAICLHKWVSG +QS CS 
Sbjct: 586  WGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCST 645

Query: 592  CRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETS 651
            CR+ F F RKRHNCYNCGLV+CH+CSSKK+ +A++AP+  + YRVCD+C+ KL+K +E +
Sbjct: 646  CRLAFGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSCYVKLSKVSEIN 705

Query: 652  SSS--HSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTS-MESLKKVESGSSKRNKKQE 708
             ++  +S V R    N+   + ++  E  +++    FGTS M+ +K+++S ++K+ KK +
Sbjct: 706  DTNRRNSAVPRLSGENR---DRLDKSEIRLAK----FGTSNMDLIKQLDSKAAKQGKKTD 758

Query: 709  -FNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSP 767
             F+  R   LP+ +   +A+ ++     +  +T K   A    S I SR+ SP SRRSSP
Sbjct: 759  TFSLGRNSQLPSLLQLKDAVQSNIGD--MRRATPKLAQAP---SGISSRSVSPFSRRSSP 813

Query: 768  PRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTR 823
            PR+ TP P+ SGL  P  + D+ K+T+E    E++KLR QV+ LT+K + QE+EL+ + +
Sbjct: 814  PRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQVDSLTQKCEFQEVELQNSVK 873

Query: 824  QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVG------AVRN---------- 867
            + +EALA+A EE+AK RAAK+ IKSL AQLKD+AE LP G       ++N          
Sbjct: 874  KTQEALALAEEESAKSRAAKEAIKSLIAQLKDVAEKLPPGESVKLACLQNGLDQNGFHFP 933

Query: 868  -SNSFHSSPTPA------------WDVSSAAIEQPSSPLTFQGAIPNGSNSL-----ILS 909
              N FH S + +            +  ++A+     SP     A    SN+      + S
Sbjct: 934  EENGFHPSRSESMTSSISSVAPFDFAFANASWSNLQSPKQTPRASERNSNAYPADPRLSS 993

Query: 910  NGSDFGDNRSPSQTEASHCEATTKNK-NRTMKAEPAQGDEWVEQDETGVYITLVALPGGL 968
            +GS   +   P Q + +    +++   N T + E     EW+EQ E GVYITLVAL  G 
Sbjct: 994  SGSVISERIEPFQFQNNSDNGSSQTGVNNTNQVEA----EWIEQYEPGVYITLVALHDGT 1049

Query: 969  KDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVS 1012
            +DL+RVRFSR++F E QAE WW+ NR +VY++YNV + +KS+ S
Sbjct: 1050 RDLRRVRFSRRRFGEHQAETWWSENREKVYEKYNVRVSEKSTAS 1093


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  892 bits (2304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/909 (52%), Positives = 612/909 (67%), Gaps = 85/909 (9%)

Query: 108  YESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFR 167
            Y SPP+N + K      LY          +S  G   + S+  ++G    L+   G    
Sbjct: 9    YGSPPRNGVGKTFPSGALYTV--------DSFKGRSAAHSAANAEG----LRSRGGALID 56

Query: 168  VSLSSAVSSSSQGS------GHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDS 221
             S+ +A S SS  S      G ++GD  G++++WGE  GDG +   +  S      + D+
Sbjct: 57   ASVWTATSMSSAVSSSSQGSGQEEGDVFGELWMWGEGIGDGGVTKKLDTS-----FRTDA 111

Query: 222  FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
            F+P+AV S VVLDVQ IACG RH ALVT+QGEVFSWGEE GGRLGHGVD+DV+HP+LID+
Sbjct: 112  FLPRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDS 171

Query: 282  LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            L +  V+ VACGE+H+CAVT SGD+YTWG    NFGLLGHGN +S W PK++ GPLEG+ 
Sbjct: 172  LASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVR 231

Query: 342  VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
            VSSV+CGPWHT +VTS GQLF+FGDGTFGVLGHGDR S S PREV+SLKGL+T+RAACG 
Sbjct: 232  VSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGP 291

Query: 402  WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            WHTAAVVEVM   S++ +  SGKLFTWGDGD+ RLGHGDKE +LVPTCVAALV+ NF QV
Sbjct: 292  WHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQV 351

Query: 462  SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
            +CGHSLTVALTTTGH+YTMGS  YGQLGDP+A G+LP  +  +L +  +EE++CG YHVA
Sbjct: 352  ACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRLPGVL--RLGRTLIEEVSCGAYHVA 409

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWV 581
             LTS+ +V TWGKGANGRLGHGD +DR+ P+LVEAL+DKQVK + CG+SFT+AICLHK  
Sbjct: 410  ALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAICLHKSG 469

Query: 582  SGV--DQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDN 639
             GV    SMCSGCR PF F RK+HNCYNCGL YCH+CSSKK++ AS APNP K +RVCD 
Sbjct: 470  PGVGTGNSMCSGCRQPFGFTRKKHNCYNCGLPYCHSCSSKKALYASQAPNPRKLHRVCDT 529

Query: 640  CFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESG 699
            CF K+++++ + ++                      EN  +R  ++  T  +  K+ +  
Sbjct: 530  CFLKMSRSSVSVTAPK--------------------ENSETR-FLKVQTKGDLFKQTDVK 568

Query: 700  SSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATS 759
            ++KR+K+ + + +R  P+PNG+ Q   +N   + N    + K     S+P SR+ SRA S
Sbjct: 569  TTKRSKRPD-STSRVSPMPNGLLQWGGVNAPAAFNAFLDAAK-----SIPQSRVGSRAVS 622

Query: 760  PTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQE 815
            P SRR SPPR+ TP PT+ GL SPK  V+  K  +E    E+ +L+AQVE+LTR+ +  E
Sbjct: 623  PLSRRPSPPRSATPIPTVGGLTSPKHEVEGVKLKNESLILEISRLKAQVEKLTRRCESHE 682

Query: 816  IELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSP 875
             EL  +++Q+++A AVAG E+AKC+AAK+VI SLTAQLKD+AE +P G      S+ + P
Sbjct: 683  KELLHSSKQIQDAFAVAGAESAKCKAAKEVIMSLTAQLKDLAERMPPG------SYRTRP 736

Query: 876  TPAWDVSSAAIEQPSSPLTFQGAIPNGSNSL-ILSNGSDFGDNRSPSQTEASHCEATTKN 934
             P           PS+PL   G   +G+    + +  SD   +R   Q +     + T  
Sbjct: 737  EP-----------PSAPLPEDGTRSHGNVVCDVPARLSDVDTSRLHDQADGRASNSATSE 785

Query: 935  KNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANR 994
                        +EWVEQD+ GVYITL ALPGG KDLKRVRFSRK+FSEKQAE WW  NR
Sbjct: 786  SGV---------EEWVEQDQPGVYITLTALPGGGKDLKRVRFSRKRFSEKQAEIWWQENR 836

Query: 995  ARVYQQYNV 1003
             RVY+QYNV
Sbjct: 837  HRVYEQYNV 845


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/1124 (46%), Positives = 702/1124 (62%), Gaps = 169/1124 (15%)

Query: 4    QPIFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAE 61
            + +FQR+PRPEK+Y SFSLIYN   RSLDLICKDK EAEVW  GL ALIS     + + +
Sbjct: 138  KAVFQRFPRPEKDYLSFSLIYNHGKRSLDLICKDKVEAEVWIAGLGALISSGQGGRSKID 197

Query: 62   SRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALS 121
               D                         GG    DG + L  ++  ES  +   D  +S
Sbjct: 198  GWCD-------------------------GGLYLDDGKN-LTSNSPSESSVRASQD--IS 229

Query: 122  DAVLYAAPPKVLLPSESACGSVN-SLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQG 180
               + A+ P V   S     +VN   S   ++     +KG S D FRVS+SSA S+SS G
Sbjct: 230  SPDISASIPNVSPKSFHPENTVNFEKSHAPANSPNMQVKGSSSDVFRVSVSSAPSTSSHG 289

Query: 181  SGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
            S  DD D+LGDV+IWGE   + ++  G  ++ SY   + D  +PK +ES VVLDV  IAC
Sbjct: 290  SAPDDYDALGDVYIWGEVISENVVKVGADKNVSYCSPRTDILLPKPLESNVVLDVLQIAC 349

Query: 241  GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
            G +HAALVT+QGE+F+WGEE GGRLGHGV  +V  P L++AL +  V+ VACGE HTCAV
Sbjct: 350  GVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQPCLVEALASSTVDFVACGEFHTCAV 409

Query: 301  TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            T++G++YTWG    N GLLGHG ++S W+PK++ GPLEG+ V+ V+CGPWHTA++TS GQ
Sbjct: 410  TMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGPWHTALITSTGQ 469

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
            LFTFGDGTFGVLGHGDR ++S PREV+SL GLRTV  ACGVWHTAA+VEV+V  SS+S  
Sbjct: 470  LFTFGDGTFGVLGHGDRENISYPREVESLSGLRTVSVACGVWHTAAIVEVIVTQSSAS-I 528

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            SSGKLFTWGDGD+ RLGHGDK+ARL PTC++AL++ NF +++CGHSLTV LTT+G V+TM
Sbjct: 529  SSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTM 588

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            GS VYGQLG+P+++GKLP  VE KL    VEEIACG YHV VLTSR EVYTWGKGANGRL
Sbjct: 589  GSTVYGQLGNPQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSRNEVYTWGKGANGRL 648

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKR 600
            GHGD +DR  P+LVEALKD+ VK I CG++++AAICLHKWVSG +QS CS CR  F F R
Sbjct: 649  GHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAFGFTR 708

Query: 601  KRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSR 660
            KRHNCYNCGLV+CH+CSS+K+++A++APNP K YRVCD C+ KL K  E+S +     +R
Sbjct: 709  KRHNCYNCGLVHCHSCSSRKALRAALAPNPGKLYRVCDTCYVKLNKVAESSIN-----NR 763

Query: 661  RGSMNQ--GFN-EAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPL 717
            R +M +  G N + +E  E  +S+  V   ++M+ +K+++S ++K+ KK +        L
Sbjct: 764  RNAMPRFPGENKDRLEKSELRLSKPAVP--SNMDLIKQLDSKAAKQGKKADM-----FSL 816

Query: 718  PNGVSQGNALNNSKSSNPVFGSTKKFFSASLPG-----SRIMSRATSPTSRRSSPPRATT 772
             +  +Q  +L   K    V  ST      ++P      S + SR+ SP SRRSSPPR+ T
Sbjct: 817  AH-TTQAPSLLQLKD---VVLSTAMDLKRTVPRPVITPSGVNSRSVSPFSRRSSPPRSAT 872

Query: 773  PTPTLSGLASPKIVVDDAKRT----SEEVIKLRAQV------------------------ 804
            P PT SGLA  K + D  K+T    ++EV+KLR+QV                        
Sbjct: 873  PIPTTSGLAFSKSITDSLKKTNDLLNQEVLKLRSQVYYTSLISVVSIKLQNFSSILNFFS 932

Query: 805  ------EELT------------------------RKSQLQEIELERTTRQLKEALAVAGE 834
                  EE+                         ++ +LQE+EL+++ ++ +EA+ +A E
Sbjct: 933  VMFESEEEIVGQILEKLDEERIEKKNEARVETLRQRCELQELELKKSAKKTQEAMVLATE 992

Query: 835  ETAKCRAAKDVIKSLTAQLKDMAEMLPVGA----------VRN----SNSFH-------S 873
            E+AK +AAK+VIKSLTAQLKD+AE LP GA          +RN    SN  H        
Sbjct: 993  ESAKSKAAKEVIKSLTAQLKDLAERLPPGAYDTDNIRPGNLRNGFVESNGIHHPDSNGEQ 1052

Query: 874  SPTPAWDVSSAAIE------------QPSSPLTFQGAIPNGSNSLILSNGS-DFGDNRSP 920
              T A  +S +++             + +S  ++   +   S + + SNG+ D+ D+R P
Sbjct: 1053 GHTRAESISGSSLASLGLESSLMNRTERNSTGSYATNLYQQSRASVTSNGTDDYRDDRLP 1112

Query: 921  ---SQTEASHC-----------------EATTKNKNRTMKAEPAQGD-EWVEQDETGVYI 959
               S  +A++                  E+ ++++N  + A   Q + EW+EQ E GVYI
Sbjct: 1113 NSGSMIQATNSSVSDTFDGRNSGNFRDDESGSRSRNDVLAANSNQVEAEWIEQYEPGVYI 1172

Query: 960  TLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            TLVA+  G +DL+RVRFSR++F E QAE WW+ NR RVY++YNV
Sbjct: 1173 TLVAMRDGTRDLRRVRFSRRRFGENQAETWWSENRDRVYERYNV 1216


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  884 bits (2283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/903 (53%), Positives = 617/903 (68%), Gaps = 73/903 (8%)

Query: 108  YESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFR 167
            Y SPP+N + K      LY         +  +  +  SL S     R G L   S  T  
Sbjct: 9    YGSPPRNGVGKTFPSGALYTVDSSKGRSAAHSAANAESLRS-----RGGALIDASVWTA- 62

Query: 168  VSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAV 227
             S+SSAVSSSSQGSG ++GD  G++++WGE  GDG     +  S      + D+F+P+AV
Sbjct: 63   TSMSSAVSSSSQGSGQEEGDVFGELWMWGEGIGDGGGTKKLDTS-----FRTDAFLPRAV 117

Query: 228  ESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV 287
             S VVLDVQ IACG RHAALVT+QGEVFSWGEE GGRLGHGVD+DV+HP+LID+L +  V
Sbjct: 118  RSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTV 177

Query: 288  ELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 347
            + VACGE+H+CAVT SGD+YTWG    NFGLLGHGN +S W PK++ GPLEG+ VSSV+C
Sbjct: 178  QYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVAC 237

Query: 348  GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
            GPWHT +VTS GQLF+FGDGTFGVLGHGDR S S PREV+SLKGL+T+RAACG WHTAAV
Sbjct: 238  GPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAV 297

Query: 408  VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
            VEVM   S++ +  SGKLFTWGDGD+ RLGHGDKE +LVPTCVAALV+ NF QV+CGHSL
Sbjct: 298  VEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSL 357

Query: 468  TVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
            TVALTTTGH+YTMGS  YGQLGDP+A G+LP  +  +L +  +EE++CG YHVA LTS+ 
Sbjct: 358  TVALTTTGHLYTMGSVSYGQLGDPQATGRLPGVL--RLGRTLIEEVSCGAYHVAALTSKG 415

Query: 528  EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGV--D 585
            +V TWGKGANGRLGHGD +DR+ PSLVEAL+DKQVK + CG+SFT+AICLHK   GV   
Sbjct: 416  DVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAICLHKSGPGVGTG 475

Query: 586  QSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLT 645
             SMCSGCR PF F RK+HNCYNCGL YCH+CSSKK++ AS APNP K +RVCD CF K++
Sbjct: 476  NSMCSGCRQPFGFTRKKHNCYNCGLPYCHSCSSKKALYASQAPNPRKLHRVCDTCFLKMS 535

Query: 646  KATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNK 705
            +++ + ++                      EN  +R  ++  T  +  K+ +  ++KR+K
Sbjct: 536  RSSVSVTAPK--------------------ENSETR-FLKVQTKGDLFKQTDVKTTKRSK 574

Query: 706  KQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRS 765
            + + + +R  P+PNG+ Q   +N   + N    + K     S+P SR+ SRA SP SRR 
Sbjct: 575  RPD-STSRVSPMPNGLLQWGGVNAPAAFNAFLDAAK-----SIPQSRVGSRAVSPLSRRP 628

Query: 766  SPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERT 821
            SPPR+ TP PT+ GL SPK  V++ K  +E    E+ +L+AQVE+LTR+ +  E EL  +
Sbjct: 629  SPPRSATPIPTVGGLTSPKHEVEEVKLKNESLILEISRLKAQVEKLTRRCESHEKELLHS 688

Query: 822  TRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDV 881
            ++Q+++A AVAG E+AKC+AAK+VI SLTAQLKD+AE +P G      S+ + P P    
Sbjct: 689  SKQIQDAFAVAGAESAKCKAAKEVIMSLTAQLKDLAERMPPG------SYRTRPEP---- 738

Query: 882  SSAAIEQPSSPLTFQGAIPNGSNSL-ILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMK 940
                   PS+PL   G   +G+    + +  SD   +R   Q +     + T        
Sbjct: 739  -------PSAPLPEDGTRSHGNVVCDVPARLSDVDTSRLHDQADGRASNSATSESGV--- 788

Query: 941  AEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQ 1000
                  +EWVEQD+ GVYITL ALPGG KDLKRVRFSRK+FSEKQAE WW  NR RVY+Q
Sbjct: 789  ------EEWVEQDQPGVYITLTALPGGGKDLKRVRFSRKRFSEKQAEIWWQENRHRVYEQ 842

Query: 1001 YNV 1003
            YNV
Sbjct: 843  YNV 845


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  875 bits (2262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/926 (51%), Positives = 625/926 (67%), Gaps = 85/926 (9%)

Query: 157  HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAG 216
             +KG S D FRVS+SSA S+SS GS  DD D+LGDV+IWGE   + ++  G  +S SY  
Sbjct: 203  QVKGSSSDVFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVICENVVKVGAEKSASYFS 262

Query: 217  VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
             + D  +P+ +ES VVLDV  IACG +HAALVT+QGE+F+WGEE GGRLGHGV  +V  P
Sbjct: 263  PRTDILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQP 322

Query: 277  KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
            +L++A+ +  V+ VACGE HTCAVT++G++YTWG    N GLLGHG ++S W+PK++ GP
Sbjct: 323  RLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGP 382

Query: 337  LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
            LEG+ V+ V+CGPWHTA++TS GQLFTFGDGTFGVLGHGDR +VS PREV+SL GLRT+ 
Sbjct: 383  LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIA 442

Query: 397  AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
             ACGVWHTAAVVEV+V  SS+S  SS KLFTWGDGD+ RLGHGDK+ARL PTCV+ L++ 
Sbjct: 443  VACGVWHTAAVVEVIVTQSSAS-VSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDS 501

Query: 457  NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
            NF +++CGHSLTV LTT+G V+TMGS VYGQLG+P+++GK+P  V+ KL    VEEIACG
Sbjct: 502  NFHRIACGHSLTVGLTTSGEVFTMGSSVYGQLGNPQSDGKVPCLVKDKLAGESVEEIACG 561

Query: 517  DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
             YHVAVLTS+ EVYTWGKGANGRLGHGD +DR  P+LVEALKD+ VK I CG++++AAIC
Sbjct: 562  AYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAIC 621

Query: 577  LHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRV 636
            LHKWVSG +QS CS CR  F F RKRHNCYNCGLV+CH+CSS+K+++AS+APNP KPYRV
Sbjct: 622  LHKWVSGAEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRASLAPNPGKPYRV 681

Query: 637  CDNCFGKLTKATETSSSSHSTVSRRGSMNQ--GFN-EAVEHGENFVSRSHVQFGTSMESL 693
            CD+CF KL K  E+ +++     RR +M +  G N + +E  E  ++++ V   ++M+ +
Sbjct: 682  CDSCFVKLIKVAESGNNN-----RRNAMPRLSGENKDRLEKSELRLTKTAVP--SNMDLI 734

Query: 694  KKVESGSSKRNKK--QEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPG- 750
            K+++S ++ +  K    F+  R        SQ  +L   K    V  ST      + P  
Sbjct: 735  KQLDSKAAAKQGKKADTFSLVR-------TSQPQSLLQLKD---VVLSTAIDLKRTAPRP 784

Query: 751  ----SRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRA 802
                S + SR+ SP SRR SPPR+ TP PT SGL+  K + D  K+T+E    EV+KLR 
Sbjct: 785  VLTPSGVSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSITDSLKKTNELLNQEVLKLRG 844

Query: 803  QVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAE---- 858
            QVE L ++ +LQE+EL+R+T++ +EA+A+A EE+AK +AAK+VIKSLTAQLKD+AE    
Sbjct: 845  QVETLRQRCELQELELQRSTKKTQEAMALAAEESAKSKAAKEVIKSLTAQLKDLAERLPP 904

Query: 859  -----------MLPVGAVRNSNSF-------HSSPTPAWDVSSAAIEQPSSPLT-FQGAI 899
                        LP G   N   +       H+        S A+I   SS L   +G +
Sbjct: 905  GAYDAENIRPAYLPNGLEPNGIHYPELNGERHTRAESISGSSLASIGLESSLLNRTEGTL 964

Query: 900  PN--GSNSL------ILSNGSDFGDNR---------SPSQTEASHC------------EA 930
            P   G+N        + SNG+D   N           PS +  S              E+
Sbjct: 965  PGSYGANLYLQNRGSVTSNGTDDYPNVKLPNGSSMIQPSSSTVSDMVDGRDSGDFQDDES 1024

Query: 931  TTKNKNRTMKAEPAQGD-EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQW 989
              +++N  + A   Q + EW+EQ E GVYITLVAL  G +DLKRVRFSR++F E QAE W
Sbjct: 1025 GLRSRNTIVPANSNQVEAEWIEQYEPGVYITLVALGDGTRDLKRVRFSRRRFGEHQAETW 1084

Query: 990  WAANRARVYQQYNVSMVDKSSVSIGR 1015
            W+ NR RVY++YNV   DKSS    R
Sbjct: 1085 WSENRDRVYERYNVRSTDKSSGQAAR 1110



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 45/62 (72%), Gaps = 2/62 (3%)

Query: 6   IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
           +FQRY  PEK+Y SFSLIYN+  RSLDLICKDK EAEVW  GLKALIS     + + +  
Sbjct: 77  VFQRYLCPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGW 136

Query: 64  SD 65
           SD
Sbjct: 137 SD 138


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  853 bits (2203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/1039 (47%), Positives = 659/1039 (63%), Gaps = 107/1039 (10%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +F+RY RPEK+Y SFSL+YN  +RSLDLICKDK EAEVW  GL+ALIS   +R  R  +R
Sbjct: 77   VFRRYLRPEKDYLSFSLLYNNGERSLDLICKDKVEAEVWLAGLQALISTGQHRNRR--TR 134

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPP---KNVLDKAL 120
            SD                      F  GG   ++G  P  ++  + S     ++ +D + 
Sbjct: 135  SD-------------------IPDFHDGGDFIQNG-RPFGVNLDFASSIARGRSSVDLSS 174

Query: 121  SDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQG 180
             D+ L  A                  S  GS+     L+    D FR+S+SS  S SSQG
Sbjct: 175  RDSSLNWAS-----------------SDAGSERTNMQLRTSGVDGFRISVSSTPSCSSQG 217

Query: 181  SGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
            SG DD +SLGDV++WGE   DG+L  G   S S   +K+D   PK++ES VVLDV  IAC
Sbjct: 218  SGPDDIESLGDVYVWGEVWCDGVLPDG---SVSPFPIKIDVLTPKSLESNVVLDVHQIAC 274

Query: 241  GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
            G RH ALVT+QGEVF+WGEE GGRLGHG+D+D S P L++ L   NV+ VACGE+HTCAV
Sbjct: 275  GVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAV 334

Query: 301  TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            + SGD++TWG    N GLLGHG E+S W+PK+++GPLEG+ V SV+CG WH+A+ TS G+
Sbjct: 335  STSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSNGK 394

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
            LFTFGDGTFGVLGHGDR SV  PREV  L GL+T++ ACGVWHTAA++EVM  S S +N 
Sbjct: 395  LFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVM--SQSGTNI 452

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            SS KLFTWGDGD+ RLGHG KE  L+PTCV+AL++ NF Q++CGH++TVALTT+GHV+TM
Sbjct: 453  SSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTM 512

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            G   YGQLG+P ++G+LP  V+ KL   FVEEI+CG YHVAVLTSR+EV+TWG+GANGRL
Sbjct: 513  GGTAYGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRL 572

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKR 600
            GHGDT+DR  P+ VEALKD+ VKSI CG++FTA+IC+HKWVSG DQS+CSGCR  F F R
Sbjct: 573  GHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSGADQSVCSGCRQAFGFTR 632

Query: 601  KRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSS----HS 656
            KRHNCYNCGLV+CH CSSKK++KA++AP P KP+RVCD C+ KL KA E   +S     +
Sbjct: 633  KRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDPCYAKL-KAAEAGDASIFNRKN 691

Query: 657  TVSRRGSMNQGFNEAVEHGENFVSRSHVQFG-TSMESLKKVESG-----SSKRNKKQEFN 710
            TV RR S++       + GE   +R  +  G  +    K    G     S      Q  +
Sbjct: 692  TVPRR-SIDATIRS--DRGEVRSARILMSPGPINYFEFKPARLGPRPDPSPMIQSSQGPS 748

Query: 711  RTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRA 770
              + +  P+ +S   AL N+    PV  ++ +            SR  SP SRR SPPR+
Sbjct: 749  LLKDIAFPSSLS---ALQNAL--KPVITASPQTAPPPP-PQPAFSRPVSPYSRRPSPPRS 802

Query: 771  TTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLK 826
              P  + S       V+D  K+T+E    EV KL+ QV  L +KS+ Q+ E+++  +  +
Sbjct: 803  AGPVFSRS-------VIDSLKKTNELLNQEVTKLQNQVRSLKQKSEGQDAEIQKLRKNAQ 855

Query: 827  EALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHS-----------SP 875
            EA  +A EE++KC  AK+V+KS+T QLK+M + LP   V +S +F S           S 
Sbjct: 856  EADLLALEESSKCTVAKEVVKSITTQLKEMEKQLP-PEVYDSETFKSMQTQIEAFLNTSG 914

Query: 876  TPAWDVSS---AAIE--QPSSPLTFQGAIPNGSNSLILSNGSDFGDNR-------SPSQT 923
            T A + SS   A +E  Q ++P+T    + +  N+  L++ +  G++        S S T
Sbjct: 915  TQAAEFSSSLPADLESDQKNAPVTNPLGVEDHVNAAGLTDLTQNGESSVQDSSKLSISIT 974

Query: 924  EASHCEATTKNKNRTMKAEPAQGD-EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFS 982
              +  + +T+N +R+  A   +G+ E  EQ E GVY+T +AL  G K  KRVRFS++KF 
Sbjct: 975  RDAVPQQSTENGSRS--AAKYEGEPESTEQFEPGVYVTFIALKNGTKIFKRVRFSKRKFG 1032

Query: 983  EKQAEQWWAANRARVYQQY 1001
             +QAE+WW  N+ R+ ++Y
Sbjct: 1033 GQQAEEWWKENKERLLRKY 1051


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
            domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
            domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score =  852 bits (2202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/1003 (47%), Positives = 635/1003 (63%), Gaps = 57/1003 (5%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            P F+RYPRPEKEYQSFSLI  DRSLDLICKDKDEAEVW  GLK+LI+R    K +   + 
Sbjct: 89   PTFKRYPRPEKEYQSFSLICPDRSLDLICKDKDEAEVWVVGLKSLITRVKVSKWKTTIKP 148

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            +  S  A  P  H +R SP  +            LD + +  S E+  +  L K  SD V
Sbjct: 149  EITS--AECPTPHARRVSPFVTI-----------LDQV-IQPSNETSTQTRLGKVFSDIV 194

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
               APP     +E++       S   ++    +L+  + D FR+SLSSAVS+SS GS H+
Sbjct: 195  AITAPPSNNNQTEASGNLFCPFSPTPANVENSNLRFSTNDPFRLSLSSAVSTSSHGSYHE 254

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            D D+LGDVF+WGE   DG+L G      S      D+ +PKA+ES +VLD QNIACG  H
Sbjct: 255  DFDALGDVFVWGESISDGVLSG---TGNSLNSTTEDALLPKALESTIVLDAQNIACGKCH 311

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            A LVTKQGE+FSWGE  GG+LGHG+++D   PK I +++ +  + +ACG+ HTCA+T SG
Sbjct: 312  AVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSG 371

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+Y+WG    N  LLGHGNE S W+PK++ G L+G++VS V+CGPWHTAVV S+GQLFTF
Sbjct: 372  DLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTF 431

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM-VGSSSSSNCSSG 423
            GDGTFG LGHGDR S S PREV+SL GL   + ACGVWHTAAVVEV    S +  + S G
Sbjct: 432  GDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRG 491

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            ++FTWGDG++G+LGHGD + +L+P CV +L   N CQV+CGHSLTV+ T+ GHVYTMGS 
Sbjct: 492  QVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGST 551

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
             YGQLG+P A G  P RVEG + +  VEEIACG YHVAVLTS++E+YTWGKG NG+LGHG
Sbjct: 552  AYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHG 611

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            + +++  P++V  L++KQVK+I CG++FTA IC+HKWV G + S+C+GCR PFNF+RKRH
Sbjct: 612  NVENKREPAVVGFLREKQVKAITCGSNFTAVICVHKWVPGSEHSLCAGCRNPFNFRRKRH 671

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCYNCGLV+C  CSS+KS++A++AP+ NKPYRVC  CF KL K+ E+S S+ ++ +R+  
Sbjct: 672  NCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCFTKLKKSRESSPSTPTSRTRKLL 731

Query: 664  MNQGFNEAVEHG---ENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNG 720
              +   +  E     + F+S  + +  ++  SL   E    +R+ K E N +   P  NG
Sbjct: 732  NMRKSTDVSERDSLTQKFLS-VNARLSSADSSLHYSERRHHRRDLKPEVNNSNVFPSMNG 790

Query: 721  VSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGL 780
              Q      SK S        K     +PGS + SR TSP S +S+ PR +         
Sbjct: 791  SLQPVGSPFSKGST-ALPKIPKNMMVKIPGSGMSSRTTSPVSVKSTSPRRSYEV----AA 845

Query: 781  ASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCR 840
            A  K + D     ++++  L+ QVE+L  K+   E ELE+T RQLK   A+A +E  + R
Sbjct: 846  AESKQLKDSF---NQDMAGLKEQVEQLASKAHQLEEELEKTKRQLKVVTAMAADEAEENR 902

Query: 841  AAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIP 900
            +AK+VI+SLT QLK+MAE        ++NS H+         S  + Q S+    +  + 
Sbjct: 903  SAKEVIRSLTTQLKEMAEKQSQKDSISTNSKHTDKE-----KSETVTQTSNQTHIRSMVS 957

Query: 901  NGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYIT 960
                                SQ E +    +  N +R    +P    E V QDE GVY+T
Sbjct: 958  QD------------------SQNENNLTSKSFANGHRKQNDKP----EKVVQDEPGVYLT 995

Query: 961  LVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            L++LPGG  +LKRVRFSRK+F+E+QAE+WW  N A+V +++N+
Sbjct: 996  LLSLPGGGTELKRVRFSRKQFTEEQAEKWWGENGAKVCERHNI 1038


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
            [Arabidopsis thaliana]
          Length = 1028

 Score =  852 bits (2200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/1003 (47%), Positives = 635/1003 (63%), Gaps = 57/1003 (5%)

Query: 5    PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            P F+RYPRPEKEYQSFSLI  DRSLDLICKDKDEAEVW  GLK+LI+R    K +   + 
Sbjct: 76   PTFKRYPRPEKEYQSFSLICPDRSLDLICKDKDEAEVWVVGLKSLITRVKVSKWKTTIKP 135

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            +  S  A  P  H +R SP  +            LD + +  S E+  +  L K  SD V
Sbjct: 136  EITS--AECPTPHARRVSPFVTI-----------LDQV-IQPSNETSTQTRLGKVFSDIV 181

Query: 125  LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
               APP     +E++       S   ++    +L+  + D FR+SLSSAVS+SS GS H+
Sbjct: 182  AITAPPSNNNQTEASGNLFCPFSPTPANVENSNLRFSTNDPFRLSLSSAVSTSSHGSYHE 241

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            D D+LGDVF+WGE   DG+L G      S      D+ +PKA+ES +VLD QNIACG  H
Sbjct: 242  DFDALGDVFVWGESISDGVLSG---TGNSLNSTTEDALLPKALESTIVLDAQNIACGKCH 298

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            A LVTKQGE+FSWGE  GG+LGHG+++D   PK I +++ +  + +ACG+ HTCA+T SG
Sbjct: 299  AVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSG 358

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+Y+WG    N  LLGHGNE S W+PK++ G L+G++VS V+CGPWHTAVV S+GQLFTF
Sbjct: 359  DLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTF 418

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM-VGSSSSSNCSSG 423
            GDGTFG LGHGDR S S PREV+SL GL   + ACGVWHTAAVVEV    S +  + S G
Sbjct: 419  GDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRG 478

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            ++FTWGDG++G+LGHGD + +L+P CV +L   N CQV+CGHSLTV+ T+ GHVYTMGS 
Sbjct: 479  QVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGST 538

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
             YGQLG+P A G  P RVEG + +  VEEIACG YHVAVLTS++E+YTWGKG NG+LGHG
Sbjct: 539  AYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHG 598

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            + +++  P++V  L++KQVK+I CG++FTA IC+HKWV G + S+C+GCR PFNF+RKRH
Sbjct: 599  NVENKREPAVVGFLREKQVKAITCGSNFTAVICVHKWVPGSEHSLCAGCRNPFNFRRKRH 658

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCYNCGLV+C  CSS+KS++A++AP+ NKPYRVC  CF KL K+ E+S S+ ++ +R+  
Sbjct: 659  NCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCFTKLKKSRESSPSTPTSRTRKLL 718

Query: 664  MNQGFNEAVEHG---ENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNG 720
              +   +  E     + F+S  + +  ++  SL   E    +R+ K E N +   P  NG
Sbjct: 719  NMRKSTDVSERDSLTQKFLS-VNARLSSADSSLHYSERRHHRRDLKPEVNNSNVFPSMNG 777

Query: 721  VSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGL 780
              Q      SK S        K     +PGS + SR TSP S +S+ PR +         
Sbjct: 778  SLQPVGSPFSKGST-ALPKIPKNMMVKIPGSGMSSRTTSPVSVKSTSPRRSYEV----AA 832

Query: 781  ASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCR 840
            A  K + D     ++++  L+ QVE+L  K+   E ELE+T RQLK   A+A +E  + R
Sbjct: 833  AESKQLKDSF---NQDMAGLKEQVEQLASKAHQLEEELEKTKRQLKVVTAMAADEAEENR 889

Query: 841  AAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIP 900
            +AK+VI+SLT QLK+MAE        ++NS H+         S  + Q S+    +  + 
Sbjct: 890  SAKEVIRSLTTQLKEMAEKQSQKDSISTNSKHTDKE-----KSETVTQTSNQTHIRSMVS 944

Query: 901  NGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYIT 960
                                SQ E +    +  N +R    +P    E V QDE GVY+T
Sbjct: 945  QD------------------SQNENNLTSKSFANGHRKQNDKP----EKVVQDEPGVYLT 982

Query: 961  LVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            L++LPGG  +LKRVRFSRK+F+E+QAE+WW  N A+V +++N+
Sbjct: 983  LLSLPGGGTELKRVRFSRKQFTEEQAEKWWGENGAKVCERHNI 1025


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/869 (53%), Positives = 600/869 (69%), Gaps = 43/869 (4%)

Query: 6   IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
           IFQ+YPRPEKEYQSFSLI NDRSLDLICKDKDEAEVW TGLKA+I+R   RKG+ ++RS+
Sbjct: 99  IFQQYPRPEKEYQSFSLICNDRSLDLICKDKDEAEVWITGLKAIITRGRSRKGKYDARSE 158

Query: 66  EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
            V S   SP  H QR +  +S    G + +             ES P++ L KA +D + 
Sbjct: 159 TVFS--DSP--HGQRVTTSTSSIDQGDNQRT------------ESLPQSRLGKAYADIIQ 202

Query: 126 YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
           Y A  K     E+   +++SLS+G  D    + +  + DTFRVSLSSA+SSSSQGS  +D
Sbjct: 203 YTAAGKSPTLVETGSFNLSSLSAGAVD--NSNARSSTADTFRVSLSSALSSSSQGSCLED 260

Query: 186 GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
            D+LGDVFIWGE TG+G+LGGG HR G  +G ++D+  PK++ES+VVLDVQNI+CG RHA
Sbjct: 261 FDNLGDVFIWGEGTGNGLLGGGKHRIGKSSGTRIDANTPKSLESSVVLDVQNISCGNRHA 320

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            LVTKQGE FSWGEE GGRLGHG ++DVSHPKLI   K +NVEL+ACGE+H+CAVT SGD
Sbjct: 321 MLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVTSSGD 380

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +YTWG    + GLLGH +E S W+PKK+ G +EG+ VS VSCGPWHTA++TSAG+LFTFG
Sbjct: 381 LYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITSAGRLFTFG 440

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG-SSSSSNCSSGK 424
           DGTFG LGHGDR    TPREV++  GL+T++ ACGVWHTAAVVE+M G  S  S+  SG 
Sbjct: 441 DGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGT 500

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           LFTWGDGD+G+LGHGD + RL P C+ ALV+ +F +V+C +++TVALTTTG VYTMGS V
Sbjct: 501 LFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNV 560

Query: 485 YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           YGQLG P ANG  P  VE  L  + VEEI+CG +HVAVLTSRTEVYTWGKG NG+LGHGD
Sbjct: 561 YGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGD 620

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
            +++  P+LV+ L+DKQVK IVCG++F+AAIC+H W    D S+C GCRIPFNF+RKRHN
Sbjct: 621 CENKCTPTLVDILRDKQVKRIVCGSNFSAAICVHNWALSADNSICFGCRIPFNFRRKRHN 680

Query: 605 CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSM 664
           CYNCG V+C  CSSKKS+KAS+AP+ +KPYRVCD+C+ KL KA E+   S     + G+ 
Sbjct: 681 CYNCGFVFCKACSSKKSLKASLAPSTSKPYRVCDDCYDKLQKAIESEPFSRVPKVKAGNA 740

Query: 665 NQGFNEAVEHGENF-VSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
               +E  +    F +   H    +S +S  + +   S+ ++ +  NR       N   +
Sbjct: 741 LYKASEQTDKESGFPLLVGHTSRLSSSDSFNRAQGRISRVDQYE--NRASSFQNENPPRE 798

Query: 724 GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP 783
             +L  SKS    F  +K  FSASLP +R++ ++TSP   ++S   +  P P    + + 
Sbjct: 799 SFSL--SKSPISAFRVSKSLFSASLPSTRVVPQSTSPLLGKASALWSAIPAP-YPPVRTA 855

Query: 784 KIVVDDAK----RTSEEVIKLRAQ--------------VEELTRKSQLQEIELERTTRQL 825
           ++VVD+ K      S+EV +L+AQ              +EEL  KSQL E EL R T+QL
Sbjct: 856 EVVVDNLKPINDSLSQEVKQLKAQLEAMLLGLFKNANGLEELASKSQLLEAELGRKTKQL 915

Query: 826 KEALAVAGEETAKCRAAKDVIKSLTAQLK 854
            +A A A  E  K RAAK VIKSLTAQ++
Sbjct: 916 MDATAKAAVEAEKRRAAKHVIKSLTAQVR 944


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1027

 Score =  849 bits (2193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/1003 (47%), Positives = 638/1003 (63%), Gaps = 62/1003 (6%)

Query: 7    FQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDE 66
            F+RYPRPEKEYQSFSLI  DRSLDLICKDKDEAEVW  GLK+LI+R    K +   + + 
Sbjct: 78   FKRYPRPEKEYQSFSLICPDRSLDLICKDKDEAEVWVVGLKSLITRVKVSKWKNTIKPEI 137

Query: 67   VSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVLY 126
             S  A  P  H +R SP  +            LD + +  S E+  +  L K  SD V  
Sbjct: 138  TS--AECPTPHARRVSPFVTI-----------LDQV-IQPSNETSTQTRLGKVFSDIVSI 183

Query: 127  AAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDG 186
             APP     +E++       S    +     L+  + D  R+SLSSAVS+SS GS H+D 
Sbjct: 184  TAPPSNNNQTETSANLFCPFSPTPVNVENSSLRFSTNDPIRLSLSSAVSTSSHGSYHEDF 243

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            D+LGDVF+WGE   DG+L G      S      D  +PKA+ES +VLD QNIACG  HA 
Sbjct: 244  DALGDVFVWGESICDGVLTG---TGNSLNSTTEDVLLPKALESTIVLDAQNIACGKCHAV 300

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
            LVTKQGE+FSWGE  GG+LGHG+++DV  PK I +++ +  + +ACG+ HTCA+T SGD+
Sbjct: 301  LVTKQGEIFSWGEGKGGKLGHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAITQSGDL 360

Query: 307  YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            Y+WG    N  LLGHGNE S W+PK++ G L+G++VS V+CGPWHTAVV S+GQLFTFGD
Sbjct: 361  YSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHTAVVASSGQLFTFGD 420

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GKL 425
            G+FG LGHGDR S S PREV  L GL   + ACGVWHTAA+VEV   +S +   SS G++
Sbjct: 421  GSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWHTAALVEVTNEASEAEVGSSRGQV 480

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            FTWGDG++G+LGHGD +A+L+P CV +L   N CQV+CGHSLTV+LT+TGHVYTMGS  Y
Sbjct: 481  FTWGDGEKGQLGHGDNDAQLLPECVISLSNENICQVACGHSLTVSLTSTGHVYTMGSTAY 540

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            GQLG+P A G  P RVEG + +  VEEIACG YHVAVLTS++E+YTWGKG NG+LGHG  
Sbjct: 541  GQLGNPTAKGNFPARVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGTI 600

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            +++  P++V  LK+KQVK+I CG++FTA IC+HKWV G + S+C+GCR PFNF+RKRHNC
Sbjct: 601  ENKREPAVVGFLKEKQVKAITCGSNFTAVICVHKWVPGSEHSLCAGCRNPFNFRRKRHNC 660

Query: 606  YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
            YNCGLV+C  CSS+KS++A++AP+ NKPYRVC  CF KL K+ E S+S+ ++ +R+    
Sbjct: 661  YNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCFTKLKKSREPSTSTPTSRARKLLNM 720

Query: 666  QGFNEAVEHG---ENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            +   +  E     + F+S +H +  ++   L   E    +R+ K E N +   P  NG  
Sbjct: 721  RKSTDVSERDSLTQKFLS-AHARISSADSLLHYGERRHHRRDLKPEVNNSNVFPSMNGSL 779

Query: 723  Q--GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGL 780
            Q  G+ L+   ++ P      K     +PGS + SR TSP S +S+ PR +         
Sbjct: 780  QLVGSPLSKGSTALP---KIPKNMMVKIPGSGMSSRTTSPVSVKSTSPRRSYEV----AA 832

Query: 781  ASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCR 840
            A  K + D     + ++  L+ QVE+LT K+   E ELE+T RQLK   A+A +E  + R
Sbjct: 833  AESKQIKDSF---NHDMAGLKEQVEQLTSKTHQLEEELEKTKRQLKVVTAMAADEAEENR 889

Query: 841  AAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIP 900
            +AK+VI+SLT QLK+MAE        ++NS  +      D  ++ I Q S+    +  + 
Sbjct: 890  SAKEVIRSLTTQLKEMAERQSQKDAISTNSKRT------DKETSEITQTSNQTHIRSMVS 943

Query: 901  NGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYIT 960
            +                   SQ E +    +  N +R    +P    E V QDE GVY+T
Sbjct: 944  HD------------------SQHENNLTSRSFANGHRKQNEKP----ERVVQDEPGVYLT 981

Query: 961  LVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            L+ALPGG  +LKRVRFSRK+F+E+QAE+WW  N A+V +++N+
Sbjct: 982  LLALPGGGTELKRVRFSRKQFTEEQAEKWWGENGAKVCERHNI 1024


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  840 bits (2169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/1067 (44%), Positives = 665/1067 (62%), Gaps = 119/1067 (11%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +F+RY RPEK+Y SFSL+YN  +RSLDLICKDK EAEVW  GLKALI ++H R+ R+   
Sbjct: 77   VFRRYLRPEKDYLSFSLLYNNGERSLDLICKDKVEAEVWLAGLKALIGKNHNRRTRSN-- 134

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
               +S    +     Q   P  +      SS   G   + L +       N LD   SD 
Sbjct: 135  ---ISDFQLTDGELYQNGRPFGATL-EFTSSLARGRVSIDLGSR-----DNPLDLRSSDV 185

Query: 124  VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGH 183
                                       S+  +  L+  +G  FR+S+SS  S SS GSG 
Sbjct: 186  ---------------------------SERSSMQLRASTGGDFRISVSSTPSCSSAGSGP 218

Query: 184  DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
            DD +SLGDV+IWGE   DG+   G   S S    K D   PK +ES VVLDV  I+CG R
Sbjct: 219  DDIESLGDVYIWGEIWSDGVFPDG---SVSSVPTKNDVLTPKPLESNVVLDVHQISCGVR 275

Query: 244  HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            H ALVT+QGEVF+WGEE GGRLGHG++   +HPKL+++L   N++ VACGE+HTCA++ S
Sbjct: 276  HVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHTCAISTS 335

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            GD++TWG  + N GLLGHG ++S W+PK+++GPLEG+ V S++CG WH+A+ TS G+LFT
Sbjct: 336  GDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGTWHSALATSNGKLFT 395

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            FGDGTFG LGHGDR SVS+P+E+ SL GL+T++ ACGVWHTAA+VEVM  S S SN SS 
Sbjct: 396  FGDGTFGALGHGDRKSVSSPKELQSLNGLKTIKVACGVWHTAAIVEVM--SQSGSNISSR 453

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            KLFTWGDGD+ RLGHG+K+A L+PTCV++L++ NF Q++CGH++TVALTT+GHV+TMG  
Sbjct: 454  KLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGS 513

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
             YGQLG+P +NGK+P  V+ +L   FVEEI+CG YH AVLTSR+EV+TWG+GANG+LGHG
Sbjct: 514  AYGQLGNPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHG 573

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            DT+DR  P+LVEALK++ VK++ CG +FT++IC+HKWVSG DQS+CSGCR  F F RKRH
Sbjct: 574  DTEDRKLPTLVEALKERHVKNLSCGANFTSSICIHKWVSGADQSVCSGCRQAFGFTRKRH 633

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSS----HSTVS 659
            NCYNCGLV+CH CSSKK++KA++AP P KP+RVCD+C+ KL KA E+ ++S     +TV 
Sbjct: 634  NCYNCGLVHCHNCSSKKAMKAALAPTPGKPHRVCDSCYAKL-KAAESGNTSAINRKTTVP 692

Query: 660  RRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE-FNRTRG---- 714
            RR SM+    E +E GE   SR  +    + E +K +E  S K+  + E  +  R     
Sbjct: 693  RR-SMD--IREKMERGEPRFSR--ILLSPTTEPIKYLEIKSGKQGAQSEAASIVRASQVP 747

Query: 715  --LPLPNGV--SQGNALNNS-KSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPR 769
              LPL +    S  + L N+ K + P+    +   ++S P +   SR +SP SRR SPPR
Sbjct: 748  SLLPLKDVAFPSSPSTLQNAWKPAPPIV--PQLTVNSSQPAAN--SRPSSPYSRRPSPPR 803

Query: 770  ATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQL 825
            + +P     G +  + V+D  K+T+E    ++ K++ Q++ L +K   QE+E+     + 
Sbjct: 804  SASP-----GFS--RGVIDSLKKTNEIFKQDMTKMQNQIKTLKKKCDNQELEIHNLENRA 856

Query: 826  KEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHS--SPTPAWDVSS 883
            K A  +A  E++K   A +  KS+T +LK+M + LP    R +++  +  S   A+    
Sbjct: 857  KGAAKLAAAESSKSNIAMEFAKSITKELKEMMQQLPPEG-RETDTLKAIDSKIEAFLEKI 915

Query: 884  AAIEQPSSPLTFQGAIPNGS-NSLILSNGSDFGDNRSPSQTEASHCEATTK--------- 933
             A E  S P +      N S +S + S+ S+  + R   QT+     A ++         
Sbjct: 916  RASESSSLPESVGSDYQNASASSPLTSDSSNLLEKRMEGQTDTVRATAMSRTDGSVPEES 975

Query: 934  ------------------NKNRTMKAEPAQGD---EWVEQDETGVYITLVALPGGLKDLK 972
                              N++RT  A   + +   E +EQ E GVY+T++  P G+K  K
Sbjct: 976  SRSSVSHLTEAVPRESSENESRTPTASIKRTESQKEIIEQFEPGVYVTVILRPNGVKIFK 1035

Query: 973  RVRFSRKKFSEKQAEQWWAANRARVYQQY-----NVSMVDKSSVSIG 1014
            RV+FS+++F E+QAE WW  N+ R+ ++Y     NVS+V   S  +G
Sbjct: 1036 RVKFSKRRFQEQQAEVWWKENKDRLLKKYSPPTINVSLVGGPSTPVG 1082


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  838 bits (2166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/1054 (44%), Positives = 650/1054 (61%), Gaps = 113/1054 (10%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +F+R+ RPEK+Y SFSL+YN  +R+LDLICKDK EAEVW  GLKALI R+  R+ R++  
Sbjct: 77   VFRRFLRPEKDYLSFSLLYNNGERTLDLICKDKVEAEVWLAGLKALIGRNRGRRTRSDI- 135

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
                                  S    GG   ++G                 LD  LS +
Sbjct: 136  ----------------------SDLTDGGDFLQNG-----------RISGATLD--LSSS 160

Query: 124  VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTG-HLKGLSGDTFRVSLSSAVSSSSQGSG 182
            +        L P ++   S+NS SS  +  R    L+   GD FR+S+SS  S SS GSG
Sbjct: 161  INRGRVSIDLGPRDT---SLNSASSDAASERANMQLRTSGGDGFRISVSSTPSCSSGGSG 217

Query: 183  HDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGG 242
             DD +SLGDV++WGE   D +   G   S S   +K D   PK +ES VVLDVQ IACG 
Sbjct: 218  PDDIESLGDVYLWGEVWSDAVFPDG---SMSSVPIKNDVLTPKPLESNVVLDVQQIACGV 274

Query: 243  RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
            RH ALVT+QGEVF+WGEE GGRLGHG ++D S P+L++ L   NV+ VACGE+HTCAVT 
Sbjct: 275  RHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGEYHTCAVTT 334

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            SGD+YTWG    N GLLG G ++S W+PK+++GPLEG+ V S++CG WH+A+ TS G+LF
Sbjct: 335  SGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHSALATSNGKLF 394

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
            TFGDG FGVLGHGDR S+S P+EV  L GL+T++ ACGVWHTAA+VEVM  S S +N SS
Sbjct: 395  TFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVACGVWHTAAIVEVM--SQSGANVSS 452

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
             KLFTWGDGD+ RLGHG K+  L+PTCV++L++ NF Q++CG +LTVALTT+GHV+TMG 
Sbjct: 453  RKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTMGG 512

Query: 483  PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
              +GQLG+P ++GK+PT V+  L   FVEE++CG +HVAVLTSR+E+YTWGKGANGRLGH
Sbjct: 513  TAHGQLGNPASDGKMPTLVQDSLVGEFVEEVSCGAHHVAVLTSRSELYTWGKGANGRLGH 572

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKR 602
            GDT+DR  P+LVEALKD+ VK+I CG++FT +IC+HKWVSG DQS+CSGCR  F F RKR
Sbjct: 573  GDTEDRRTPTLVEALKDRHVKNISCGSNFTTSICIHKWVSGADQSVCSGCRQAFGFTRKR 632

Query: 603  HNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRG 662
            HNCYNCGLV+CH CSSKK++KA++AP P KP+RVCD C+ KL    +TS + +  ++R+ 
Sbjct: 633  HNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYAKL----KTSDTGNYNINRKA 688

Query: 663  SMNQ---GFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEF-NRTRGLPLP 718
            +  +      E ++ GE   SR+   F  S E +K +E  S +   + E  +  R   +P
Sbjct: 689  TTPRRSIDIREKMDRGEANTSRT--LFSPSTEPIKYLEIKSVRPGMRSEAPSIVRASQVP 746

Query: 719  N-----GVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTP 773
            N      ++  ++L+  +++     S       + P     SR  SP SRR SPPR ++P
Sbjct: 747  NLLQLKDIAFPSSLSAIQNAWKPVSSPVSLSPLNSPQPMGNSRPASPYSRRPSPPRISSP 806

Query: 774  TPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEAL 829
              + S       V+D  K+T+E    ++ K++ Q++   +K   QE E+++  ++  E  
Sbjct: 807  GFSRS-------VIDSLKKTNEILKNDMTKVQNQMKTFKQKCDAQETEIQKLQKEANETA 859

Query: 830  AVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRN---------------------- 867
              A  E +KCR AK+++KSL  QLK+M   LP     N                      
Sbjct: 860  LSAKREASKCRVAKELVKSLAEQLKEMTVQLPPDIQDNETFKAMNGQIETFLHIYETSES 919

Query: 868  ---SNSFHSSPTPAWDVSSAA----IEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSP 920
               + S  S    A D +S      IE  ++ L+  G++P  S+ L +S+  +   + + 
Sbjct: 920  SSVAESLMSGQKRASDTTSNMQENRIEYQATDLSHDGSVPQDSHRLSVSSNPETVPHHNS 979

Query: 921  SQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKK 980
            S+ E+   +A+T  K            E +EQ E GVY+T V    G+K  KRV+FS+++
Sbjct: 980  SEHESRSHDASTSKKE----------GESIEQFEPGVYVTFVQRSNGVKIFKRVKFSKRR 1029

Query: 981  FSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIG 1014
            F E+QAE WW  N+ R+ ++Y+  +V+ ++ SIG
Sbjct: 1030 FQEQQAEVWWKENKDRLLRRYSPPIVNVAA-SIG 1062


>gi|358345377|ref|XP_003636756.1| Chromosome condensation regulator protein [Medicago truncatula]
 gi|355502691|gb|AES83894.1| Chromosome condensation regulator protein [Medicago truncatula]
          Length = 1170

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/1088 (45%), Positives = 658/1088 (60%), Gaps = 164/1088 (15%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +FQRY RPEK+Y SFSLIYN+  RSLDLICKDK EA+VW +GLK LIS            
Sbjct: 147  VFQRYLRPEKDYVSFSLIYNNGKRSLDLICKDKVEADVWISGLKKLISS----------- 195

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDP--LHLHTSYESPPKNVLDKALS 121
                                     G GG S+ DG     L+L  S +    +    + S
Sbjct: 196  -------------------------GQGGRSKIDGWSDGGLNLDDSKDLTSNSPSGSSAS 230

Query: 122  DAVLYAAPP-KVLLPSES--ACGSVNSLSSGGSDGRTG----HLKGLSGDTFRVSLSSAV 174
             ++  ++P   V LPS S  +    N+L+S  S  R+      +KG   DT RVS+SSA 
Sbjct: 231  ASLDISSPDISVSLPSTSPNSYRPDNTLNSERSHARSESTNMQIKGSGTDTVRVSVSSA- 289

Query: 175  SSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
             +SS GS  DD D+L DV+IWGE   + I  G   +S  +   + D  +P+ +ES VVLD
Sbjct: 290  -TSSHGSAPDDYDALADVYIWGEIICENIKVGA-DKSVHFCP-RADVLLPRPLESNVVLD 346

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            VQ+IACG RHA+LVT+QGEVF+WGEE GGRLGHGV  +V  P+L++AL +  V+ VACGE
Sbjct: 347  VQHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALTSTTVDFVACGE 406

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
             H+CAVT++G++YTWG    N GLLGHG+  S W+PK++ GPL+G+ VS V+CGPWHTA+
Sbjct: 407  FHSCAVTMTGELYTWGDGTHNAGLLGHGSNASHWIPKRIGGPLDGLQVSFVACGPWHTAL 466

Query: 355  VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +TS G                 + +VS PREVDSL GLRT+  ACGVWHTAAVVEV + +
Sbjct: 467  ITSTG-----------------KENVSYPREVDSLLGLRTIAVACGVWHTAAVVEV-IAT 508

Query: 415  SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
             S ++ SSGKLFTWGDGD+ RLGHGDKE+RL PTCV A+++ +F +++CGHSLTV LTTT
Sbjct: 509  QSIASLSSGKLFTWGDGDKNRLGHGDKESRLNPTCVPAIIDYDFKKIACGHSLTVGLTTT 568

Query: 475  GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            G V+TMGS VYGQLG+P+++GKLP  V  K+    VEEI+CG YHVAVLTS+ EVYTWGK
Sbjct: 569  GRVFTMGSTVYGQLGNPQSDGKLPCLVGDKIALESVEEISCGAYHVAVLTSKNEVYTWGK 628

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRI 594
            G+NGRLGHGD +DR  P+LVEALKD+ VK I C ++++AAICLHKWVSG +QS CS CR 
Sbjct: 629  GSNGRLGHGDLEDRKTPTLVEALKDRHVKYIACASNYSAAICLHKWVSGAEQSQCSTCRQ 688

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSS 654
             F F RKRHNCYNCGLV+CH+CSSKK+++A++APNP+K YRVCD+C+ KL+K  E ++S+
Sbjct: 689  AFGFTRKRHNCYNCGLVHCHSCSSKKALRAALAPNPDKHYRVCDSCYAKLSKVAEANNSN 748

Query: 655  HSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE-FNRTR 713
                  R S      + ++  E  VS++ +   ++M+ +K++++ ++K+ KK + F+  R
Sbjct: 749  RRNALPRLSGEN--KDRLDKSELRVSKALIP--SNMDLIKQLDNKAAKQGKKSDTFSLAR 804

Query: 714  G-----LPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPP 768
                  L L + V    A     +  PV              S + +R+ SP SRRSSPP
Sbjct: 805  NSQTPLLQLKDVVFATAADLRRTTPRPVIAP-----------SGVSTRSASPFSRRSSPP 853

Query: 769  RATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQ 824
            R+ TP PT+SGL+  K + D  K+T+E    EV KL AQVE L  K + QE+E++R+ ++
Sbjct: 854  RSATPIPTMSGLSFSKNIADSLKKTNELLNKEVQKLHAQVESLKNKCERQELEVQRSAKK 913

Query: 825  LKEALAVAGEETAKCRAAKDV-------IKSLTAQLKDMA--------EMLPVGAVRNSN 869
             +EA+A+A EE+ KC+AAK V       +K L  +L   A          LP G    SN
Sbjct: 914  TQEAIALATEESTKCKAAKQVIKSLTAQLKDLAEKLPPEAYDAENIRPAYLPNGL--ESN 971

Query: 870  SFHSSPTPA-WDVSSAAI-------------------------------EQPSSPLTFQG 897
              H   T    D+ + +I                               +Q    +T  G
Sbjct: 972  GIHYPDTNGEQDLRAESISGSSLASIGLESSLFNRTARDLPGAYGTNLHQQIRGVVTSNG 1031

Query: 898  A-------IPNGSNSLILSN--------GSDFGDNRSPSQTEASHCEATTKNKNRTMKAE 942
                    +P+G N +  S+        G D G+ R       S   A   + N  + AE
Sbjct: 1032 TSNHPDVKLPSGGNVIQPSSSSLSDIVEGRDSGNFRDDESGVKSTNAALATSSNNQVDAE 1091

Query: 943  PAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
                  W+EQ E GVYITLVA+  G +DLKRVRFSR++F E QAE WW+ N+ +VY++YN
Sbjct: 1092 ------WIEQYEPGVYITLVAMHDGTRDLKRVRFSRRRFGENQAENWWSENKDKVYEKYN 1145

Query: 1003 VSMVDKSS 1010
            V  VDKSS
Sbjct: 1146 VRSVDKSS 1153


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  818 bits (2113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/904 (48%), Positives = 589/904 (65%), Gaps = 26/904 (2%)

Query: 6   IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
           IFQRYP+PEKEYQSFSLIY++RSLD+ICKDK EAEVW   L+ALIS++   K   + +SD
Sbjct: 78  IFQRYPQPEKEYQSFSLIYSNRSLDVICKDKVEAEVWIVALRALISQNSCCKRIGDPQSD 137

Query: 66  EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
                A SPR+H ++SS  +    S     KD  D   +   YE+ P+N L KA S+ + 
Sbjct: 138 -----ANSPRSHARKSSLSNVSCTSSDIIYKDPEDTHPILVPYETSPQNRLGKAFSEVLS 192

Query: 126 YAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
           + A  K    +ES   S+++LSSG SD    H   +  D FR S SSAVSSS   S H+D
Sbjct: 193 FTAAAKAYTQAESVARSLSNLSSGISDDANSHSSAV--DAFRNSSSSAVSSSGYVSSHED 250

Query: 186 GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
            D  GDV   GE   +  LGG ++   S   ++MD+ +PKA++    LD Q IACG +HA
Sbjct: 251 VDGPGDVLFLGEGISNLPLGGNMYDVKSSPIMRMDALLPKALDRIAALDAQIIACGSKHA 310

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            +VTKQG++FSWGE  GG+LGHG D+DVS PK+IDAL   NV LVACGE HTCAVT+SG+
Sbjct: 311 VIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVTVSGN 370

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +YTWG    N G LGHG+ +S W+P+++ G +E + +S VSCGPWHTA V+S G+LFTFG
Sbjct: 371 LYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSSQGKLFTFG 430

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           DGTFG LGHGDR S S PREV+SLKGLRT++ +CG+WHTAAV++ +  S       SGKL
Sbjct: 431 DGTFGALGHGDRSSTSKPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKL 490

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           FTWG G+RG+LGHGD+E RLVP+CV+  +    CQV+C HS+T+ALT  G VYTMG+  Y
Sbjct: 491 FTWGAGERGQLGHGDEEPRLVPSCVS--MPAGVCQVACAHSMTIALTVLGQVYTMGAADY 548

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           GQLG P + GKLP   +G +    +++IACG +HV  L+S  +VYTWGKG NG+LGHGD 
Sbjct: 549 GQLGSPCSVGKLPIHTDGDIRNCHIKQIACGSHHVVALSSNGDVYTWGKGINGQLGHGDI 608

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            DR+ P+LV+ALK KQVKS+VCG++FTA IC HK VS  DQS+CSGC  PFNF+RKRHNC
Sbjct: 609 KDRHTPTLVKALKHKQVKSVVCGSNFTAVICPHKCVSSADQSICSGCHNPFNFRRKRHNC 668

Query: 606 YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
           YNCGL++C  CSSK+S+KA++APN NKP RVCD CF KLT A E         S RGS++
Sbjct: 669 YNCGLLFCKACSSKRSLKAALAPNVNKPSRVCDECFAKLTTAMEDGPKLQVPKSCRGSLH 728

Query: 666 QGFNEAVEHGENFV---SRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
               E  E  E+     S  H +  +S++S K+    +S+ NKK E  +    P   G  
Sbjct: 729 YNCKEIAE-AESITSNPSHQHCRL-SSLDSFKQALRQNSQHNKKAESCQCHVSPTQIGSL 786

Query: 723 QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
           +       +    +        SAS PGS ++SRATSP SRRSS   +     + +  A 
Sbjct: 787 EWELTYEYEDLGEM--------SASDPGSGMLSRATSPVSRRSSQEHSLRSASSFNNFAH 838

Query: 783 PKIVVDDAKR----TSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
            +++ D++K+     S+E++ LR QV +LT +S++ E +++RT+RQLKEA     +E+ K
Sbjct: 839 AELLPDNSKQRNESLSQEILLLRGQVPDLTHRSRVLEADIDRTSRQLKEATETVKKESEK 898

Query: 839 CRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGA 898
            + AK++I+SLTAQLKDM   +P   V ++         +  +S A+ E+ S+  T+   
Sbjct: 899 NKVAKEIIRSLTAQLKDMPISIPEQCVESTKPGSFVEMTSIFLSGASREKLSTSATYLEY 958

Query: 899 IPNG 902
             NG
Sbjct: 959 EYNG 962


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  817 bits (2111), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/808 (56%), Positives = 563/808 (69%), Gaps = 88/808 (10%)

Query: 6   IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
           IFQ+YP+PEKEYQSFSL+YNDRSLDLICKDKDEAEVWF GLKALI+R ++RK R ESR +
Sbjct: 77  IFQQYPQPEKEYQSFSLLYNDRSLDLICKDKDEAEVWFVGLKALITRGNHRKWRVESRCE 136

Query: 66  EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVL 125
            VSS   SP A  +R+SP  +P   G     DG+       SYE+  +N L KA S+ + 
Sbjct: 137 SVSS--DSPHARLRRNSPSITPCDPG---DLDGV-------SYENTGQNRLGKAFSELLS 184

Query: 126 YAAPPKVLLPSESACGSVN-SLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
           Y A  K     +S    VN SLS+   D   G +    G  FRVSLSSAVSSSSQGS  +
Sbjct: 185 YTAVSKGTSQPKSI---VNPSLSTALIDNSNGRISASEG--FRVSLSSAVSSSSQGSCPE 239

Query: 185 DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGV--KMDSFVPKAVESAVVLDVQNIACGG 242
           D D+LGDV+IWGE  GDG+LGGG+++ GS   +  K+D+ +PKA+ES VVLDV  IACGG
Sbjct: 240 DFDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGG 299

Query: 243 RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
           RHA LVT+QGE+FSWGEE GGRLGHGV++DVSHPK+ID L   NVELVACGE+HTCAVTL
Sbjct: 300 RHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTL 359

Query: 303 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           SGD+YTWG    N+GLLGHG+E+S W+P+K++G +EGI VS +SCG WHTAVVTSAGQLF
Sbjct: 360 SGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLF 419

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV---MVGSSSSSN 419
           TFGDG+FG LGHGD I+ + PREV++L+GLRT + ACGVWHTAA VE    +  S +S++
Sbjct: 420 TFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSAS 479

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
            SS KL+TWGDGD+GRLGHGD E RLVP CVAAL+E   CQV+CG+ LTVALTT G VYT
Sbjct: 480 PSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRVYT 539

Query: 480 MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           MGS  YGQLG   ANGKLPT VEG++  +FVEE+ACG YHVAVLTS+ EVYTWGKG NG+
Sbjct: 540 MGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQ 599

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFK 599
           LGHGD + RN P++V+ LKDKQVK++ CG+ FT  IC+HKWVS  D S+CSGC  PF F+
Sbjct: 600 LGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVICIHKWVSSADHSVCSGCHNPFGFR 659

Query: 600 RKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVS 659
           RKRHNCYNCGLV+C  CSSKKS+KAS+APN NKPYRVCD+CF KL K  E+SS S +  +
Sbjct: 660 RKRHNCYNCGLVFCKACSSKKSLKASLAPNLNKPYRVCDDCFNKLKKIMESSSVSQNARA 719

Query: 660 RRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPN 719
           R G+++   N  ++  E +V               K+++  S+                 
Sbjct: 720 RTGNIHYKSNGVMDK-ETWV--------------PKLQATLSR----------------- 747

Query: 720 GVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSG 779
            +S   A+NN++S +                SR+ SRATSP    SSP R          
Sbjct: 748 -LSSFGAINNAESMH----------------SRLASRATSPVLGTSSPIR---------- 780

Query: 780 LASPKIVVDDAKRT----SEEVIKLRAQ 803
             S +   +D+KR     ++E+I LRAQ
Sbjct: 781 --SSEDFSEDSKRANDTLTQEIISLRAQ 806


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  817 bits (2111), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/1035 (44%), Positives = 638/1035 (61%), Gaps = 107/1035 (10%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALIS-RSHYRKGRAES 62
            +F+RY RPEK+Y SFSL+Y   +RSLDLICKDK EAEVWF GLK LIS R H+  GR+ S
Sbjct: 77   VFRRYLRPEKDYLSFSLLYRNGERSLDLICKDKGEAEVWFLGLKNLISPRQHH--GRSRS 134

Query: 63   RSDEVSSVATSPRAHTQRSSPLSSPFGSG---GSSQKDGLDPLHLHTSYESPPKNVLDKA 119
               +V       ++        S PFG+     +S   G D + L++             
Sbjct: 135  DFSDVQDANEFFQS--------SRPFGATLEFSNSLARGRDSIDLNSR------------ 174

Query: 120  LSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQ 179
                             ES    V+S    GS+     L+   GD FR S+SS  S SS 
Sbjct: 175  -----------------ESHLHLVSS--DVGSERANMQLRTSGGDGFRSSVSSTPSCSSG 215

Query: 180  GSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIA 239
            GSG DD +SLGDV++WGE   D +L  G   + S   VK D   PK +E+ VVLDVQ IA
Sbjct: 216  GSGPDDIESLGDVYVWGEIWTDLVLPDG---TSSQIPVKNDVLTPKPLETNVVLDVQQIA 272

Query: 240  CGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA 299
            CG RH ALVT+QGEVF+WGEE GGRLGHG+D D S P L++ L   +V+ VACGE+HTCA
Sbjct: 273  CGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTCA 332

Query: 300  VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
            +T S D+YTWG    N G+LGHG ++S W+PK++ G LEG+ V SV+CG WH+A+ TS G
Sbjct: 333  ITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALATSNG 392

Query: 360  QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            +L+TFGDGT+GVLGHGDR SV  PREV  L GLRT++ ACGVWHTAA+VEVM  S + SN
Sbjct: 393  KLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVM--SQTGSN 450

Query: 420  CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
             SS KLFTWGDGD+ RLGHG+KE  L+PTCV++L++ NF Q++CGH++TVALTT+GHV+T
Sbjct: 451  MSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFT 510

Query: 480  MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            MG   YGQLG+P ++G +P  V+ +L   FVEEI+CG YH  VLTSR EV++WG+G+NGR
Sbjct: 511  MGGTAYGQLGNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGR 570

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFK 599
            LGHGD +DR  P+L+EALKD+ VKSI CG++FTA+IC+HKWVSG DQS+C+GCR  F F 
Sbjct: 571  LGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSGADQSVCTGCRQAFGFT 630

Query: 600  RKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVS 659
            RKRHNCYNCGLV+CH+CSSKK++KA++AP P KP+RVCD+C+ KL  A    + ++  V+
Sbjct: 631  RKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKPHRVCDSCYAKLKSA---EAGNNFCVN 687

Query: 660  RRGSMNQ---GFNEAVEHGENFVSRSHVQFGTS---MESLKKVESGSS-------KRNKK 706
            R+ + N+    + E  + G+   SR  +   T       +K V  GS        + ++ 
Sbjct: 688  RKLTANRRSTDYKERFDRGDVRPSRILLSPTTEPVKYHEIKSVRPGSRPTSPSMVRASQV 747

Query: 707  QEFNRTRGLPLPNGVSQ-GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRS 765
                + + +  P+ +S   NAL  +  + P             P     SR  SP +RR 
Sbjct: 748  PSLQQLKDIAFPSSLSAIQNALRPALVAPPS------------PPPMGNSRPASPYARRP 795

Query: 766  SPPRATTPTPTLSGLASPKIVVDDAKRTSEEVI----KLRAQVEELTRKSQLQEIELERT 821
            SPPR+TTP  +       K V+D  K+++E ++    KL+ +V+ L +K  +Q  E++  
Sbjct: 796  SPPRSTTPVFS-------KSVIDSLKKSNETLVQDKSKLQREVKNLKQKCDIQGAEIQNL 848

Query: 822  TRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLP--VGAVRNSNSFHSSPTPAW 879
             +   EA ++  EE++KC+ AK ++ ++T QLK+M + LP  +    N  S ++      
Sbjct: 849  QKNATEAASLVEEESSKCKIAKKLVTTITEQLKEMKDKLPPEIWDGENFKSMYAQAEAFL 908

Query: 880  DVSSAAIEQPSSPLTFQG-----AIPNG-------SNSLILSNGSDFGDNRSPSQTEASH 927
            ++   + +  S P + +      A+ NG       S+  I  +GS   D    +      
Sbjct: 909  NMVETS-KTSSLPTSHEKTNNLTALNNGSTPSLDDSSKRIEDDGSGRKDLTQENVNSLLE 967

Query: 928  CEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAE 987
             + T++N +R+  +      + +EQ E GVY TLV L  G K  KRVRFS+++F E+QAE
Sbjct: 968  SKKTSENGSRSPLSSTEGEKQVIEQFEPGVYATLVVLSNGTKIFKRVRFSKRRFDEQQAE 1027

Query: 988  QWWAANRARVYQQYN 1002
             WW+ N+ R+ ++YN
Sbjct: 1028 DWWSKNKDRLLKRYN 1042


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago truncatula]
          Length = 1108

 Score =  809 bits (2089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/1047 (44%), Positives = 649/1047 (61%), Gaps = 103/1047 (9%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRS-HYRKGRAES 62
            +F+RY +PEK+Y SFSL+YN  +R+LDLICKDK EAEVWF GLKALIS   H R  R+ES
Sbjct: 77   VFRRYLQPEKDYLSFSLVYNNGERTLDLICKDKAEAEVWFAGLKALISTGRHSRLTRSES 136

Query: 63   RSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSD 122
              + V  +            P   PFG+           L + TS  +  +   D    +
Sbjct: 137  SYEGVDII------------PNGRPFGA----------VLEISTSI-ARGRVSTDSLPCE 173

Query: 123  AVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSG 182
            + LY A P V             L      GRT       GD FR+S+SS  S SS GSG
Sbjct: 174  SSLYFANPDV------------GLDRTNMQGRTS-----VGDGFRISVSSTPSVSSLGSG 216

Query: 183  HDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGG 242
             DD +SLGDV+IWGE   D +   G   +G+      D  VPK +ES+VVLDV  IA G 
Sbjct: 217  PDDIESLGDVYIWGEVWADAVAPDG---NGTQFPSTTDVLVPKPLESSVVLDVHQIASGV 273

Query: 243  RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
            RH ALVT+QGEVF+WGEE GGRLGHG+D D   P+L++ L   NVE VACGE+HTCAV++
Sbjct: 274  RHMALVTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVESVACGENHTCAVSI 333

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            S ++++WG    N GLLGHG ++S W+PK++NGPLEG+ V S++CG WH+A+ TS G+LF
Sbjct: 334  SDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISIACGTWHSALATSNGKLF 393

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
            TFGDGTFGVLGHG+R SV+ P+EV  L GL+T+  ACGVWHTAA+VEV     S SN SS
Sbjct: 394  TFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTITVACGVWHTAAIVEVTF--QSGSNVSS 451

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
             KLFTWGDGD+ RLGHG+KE  L PTCV+ L+E NF Q++CGH++T+ALTT+GH++TMG 
Sbjct: 452  RKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFHQIACGHTMTIALTTSGHLFTMGG 511

Query: 483  PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
              +GQLG+  ++GK+P  V+  L   FVEEI+CG +HVA LTSR+E+YTWGKGANGRLGH
Sbjct: 512  TEFGQLGNSLSDGKIPILVQDALVGEFVEEISCGAHHVAALTSRSELYTWGKGANGRLGH 571

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKR 602
            GD DDR  P+LVEALK++ VK+I CG+SFT+ IC+HKWVSGVDQS C+GCR PF F RKR
Sbjct: 572  GDIDDRKSPTLVEALKERHVKNISCGSSFTSCICIHKWVSGVDQSTCTGCRQPFGFTRKR 631

Query: 603  HNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRG 662
            HNCYNCGLV+CH CSS+K +KA++AP P KP+RVCD+C+ KL KA E +++S+  ++R+ 
Sbjct: 632  HNCYNCGLVHCHGCSSRKVMKAALAPTPGKPHRVCDSCYTKL-KAVEANAASN--LNRKV 688

Query: 663  SMNQ---GFNEAVEHGENFVSRS-HVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLP 718
            ++ Q     +    +G+    RS  + F    E LK +E  ++K         T  +P  
Sbjct: 689  TITQPRSSIDGRDRYGQGETVRSTKILFPPFSEPLKYLEMRTNKLGNSSML-PTSQIP-- 745

Query: 719  NGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLS 778
              ++Q   ++   S++ +    K   + + P       +T P + RS  P A  P+P  S
Sbjct: 746  -SIAQMKDMSFPSSTSSIQNGLKYPLAPNPP-------STPPLNARSVSPYARRPSPPRS 797

Query: 779  GLAS-PKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAG 833
                  + ++D  K+T+E    +V KL+ Q   L +KS +   E+++  + +K+A ++A 
Sbjct: 798  SSPGFSRSIIDSMKKTNELLNQQVSKLQNQNRSLKQKSTM---EIQKLHKNIKDATSLAA 854

Query: 834  EETAKCRAAKDVIKSLTAQLKDMAEMLPV---------GAVRNSNSFHSSPTPAWDVSSA 884
            EE++K +A K+   S+ AQLK+MAE LP            V ++ +F     P ++  S 
Sbjct: 855  EESSKHKATKEYFGSMIAQLKEMAEQLPPEVLEGEKFRNMVIHAENFLEE-NPKYETCSV 913

Query: 885  A----IEQPSSPLTFQGA-----IPNGSNSLILSN-----GSDFGDNR--SPSQTEASHC 928
            A     EQ S P++  G      I   +N     N     G+ F +N   S S TEA   
Sbjct: 914  ASNLESEQQSEPVSNNGKLKGKIIEENNNEAAEVNPSQDVGNVFQENNGSSSSNTEARVA 973

Query: 929  EATTKNKNRTMKAEPA--QGD-EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQ 985
              +++N +RT+    +  +G+ + V+Q E GVY+TL+  P G +  K V+FS++KF E Q
Sbjct: 974  SQSSENDSRTLNPSRSVREGNTQVVDQFEPGVYVTLIVRPDGKRLFKSVKFSKRKFREHQ 1033

Query: 986  AEQWWAANRARVYQQYNVSMVDKSSVS 1012
            AE+WW  N+ RV+ +Y+    +  +V+
Sbjct: 1034 AEEWWTLNKDRVHARYSPQATNPENVA 1060


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/867 (51%), Positives = 586/867 (67%), Gaps = 50/867 (5%)

Query: 6   IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
           +FQRY RPEK+Y SFSLIYN+  RSLDLICKDK EAE+W  GLKALI      + + +  
Sbjct: 77  VFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEIWIAGLKALIGSGDGGRSKIDGW 136

Query: 64  SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
           SD                         GG  Q D  D L   +  +S      D +  + 
Sbjct: 137 SD-------------------------GGLYQDDNSD-LTSSSPSDSYNSVARDISSPEV 170

Query: 124 VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTG-HLKGLSGDTFRVSLSSAVSSSSQGSG 182
               +P K    S ++  S NS  S     +T    KG S D FRVS+SSA SSSS GS 
Sbjct: 171 CTTFSPNK----SPTSVRSENSTRSHVPINQTNMQAKGSSSDIFRVSVSSAPSSSSHGST 226

Query: 183 HDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGG 242
            DD D+LGD+F+WGE   D  +  G  R+ S    + D  +PK +ES +VLD Q+IACG 
Sbjct: 227 PDDCDALGDIFVWGEVISDNFMKPGADRA-SNVSSRTDVLLPKPLESNIVLDAQHIACGV 285

Query: 243 RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
           RH+A+VT+QGEVF+WGEE GGRLG G+  DV+ P+L++AL    V+LVACGE HTCAVT+
Sbjct: 286 RHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 345

Query: 303 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            G++YTWG    N GLLG+G ++S W+PK+++G LEG+ V+ V+CGPWHTA+++S GQLF
Sbjct: 346 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 405

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           TFGDGTFGVLGHGD+ S+S PREVDSL GLRT+  ACGVWHTAAVVEV++  SS+S   S
Sbjct: 406 TFGDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTS-IPS 464

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           GKLFTWGDGD+ RLGHGDKE RL PTCV AL++ NF +++CGHS+T+ LTT+G V+T+GS
Sbjct: 465 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGS 524

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            VYGQLG+P A+GK P  VE KL     EE+ACG YHV VLTS+ EVYTWGKGANGRLGH
Sbjct: 525 SVYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGH 584

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKR 602
           GD +DR  P+LVE+LKDK VK I CG++++AAICLHK +SG +QS CS CR  F F RKR
Sbjct: 585 GDVEDRKSPTLVESLKDKHVKIIACGSNYSAAICLHKSLSGTEQSQCSACRQAFGFTRKR 644

Query: 603 HNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRG 662
           HNCYNCGLV+CH+CSSKK+++A++AP P K YRVCD+C+ KL+K +E+ S+      R+ 
Sbjct: 645 HNCYNCGLVHCHSCSSKKALRAALAPTPRKSYRVCDSCYAKLSKVSESGSN-----YRKN 699

Query: 663 SMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
           ++ +   E  +  +   +R      ++M+ +K+++S ++K+ K+ +   T  +  P    
Sbjct: 700 AVPRLSGENRDKLDKSDTRPPKTALSNMDLIKQLDSKAAKQGKRTD---TFAVVRPTQAH 756

Query: 723 QGNALNNSKSSNPVFGSTKKFFSASLPGSR-IMSRATSPTSRRSSPPRATTPTPTLSGLA 781
               L +    N V    ++     +P +  + SR+ SP SRRSSPPR+ TP PT SGL+
Sbjct: 757 SLLQLKDGPIPNTV--DIRRLAPKPIPMANGVNSRSVSPLSRRSSPPRSGTPVPTASGLS 814

Query: 782 SPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETA 837
             K + D  K+T+E    EV+ LRAQVE L ++ +LQE+EL ++ ++ +EA+AVA EE+A
Sbjct: 815 FSKGIADSLKKTNELLNQEVLMLRAQVESLRKRCELQELELRKSEKKTEEAIAVAAEESA 874

Query: 838 KCRAAKDVIKSLTAQLKDMAEMLPVGA 864
           K +AAK+VI SLTAQ+K MAE LP G 
Sbjct: 875 KSKAAKEVITSLTAQIKHMAERLPDGV 901



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 60/85 (70%), Gaps = 1/85 (1%)

Query: 929  EATTKNKNRTMKAEPAQGD-EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAE 987
            E+  +++N  +     Q + EW+EQ E GVYITL AL  G +DLKRVRFSR++F E QAE
Sbjct: 1030 ESNARSRNSALPGNDNQVEAEWIEQYEPGVYITLTALRNGTRDLKRVRFSRRRFGEHQAE 1089

Query: 988  QWWAANRARVYQQYNVSMVDKSSVS 1012
             WW+ NR +VY++YNV   +KSS+S
Sbjct: 1090 SWWSENRDKVYEKYNVRGTEKSSIS 1114


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/918 (46%), Positives = 586/918 (63%), Gaps = 85/918 (9%)

Query: 157  HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAG 216
            + KG   D  R S+SSA S+SS GS  DD DSLGDV++WGE   D        R+ S   
Sbjct: 2    YAKGPPLDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSA-----RTSSDTV 56

Query: 217  V----KMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
            +    K D  +PK +ES +VLDV ++ CG RHA+LVT+ GEVF+WGE+ GGRLGHG   D
Sbjct: 57   IRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED 116

Query: 273  VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
              HP+L+++L   N++ VACGE HTCAVT +G++YTWG    N GLLGHG ++  W+P++
Sbjct: 117  SVHPRLVESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRR 176

Query: 333  LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 392
            ++GPLEG+ ++ VSCG WHTA++TS GQLFTFGDG+FGVLGHG+  S+S PREV+SL GL
Sbjct: 177  ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGL 236

Query: 393  RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA 452
            +T+  ACGVWHTAA+VEV+V + SS+  S+GKLFTWGDGD+ RLGHGDKEARL PTCVA+
Sbjct: 237  KTIAVACGVWHTAAIVEVIV-TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVAS 295

Query: 453  LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE 512
            L++ +F +V+CGHSLTV LTT+G V+TMG+ VYGQLG+P ++G+ P  VE K+    V +
Sbjct: 296  LIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGR-PCLVEDKIASEHVLQ 354

Query: 513  IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
            IACG YHVAVLTSR+EV+TWGKGANGRLGHGD +DR  P+ VEAL+D+ V+ I CG +FT
Sbjct: 355  IACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACGANFT 414

Query: 573  AAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNK 632
            AAICLHKWVSG DQS CS CR PF F RKRHNCYNCGLV+C+ C+S+K+++A++APNP K
Sbjct: 415  AAICLHKWVSGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGK 474

Query: 633  PYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMES 692
             +RVCD+C+ KL  A+ ++S             +       +GE  V +S++   ++M+ 
Sbjct: 475  LHRVCDSCYSKLKNASSSAS------------KKDLASGESNGEARVGKSNLS--SNMDM 520

Query: 693  LKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSR 752
            ++ ++S ++K+ KK +       P  + + Q   +  S  ++    +  +        S 
Sbjct: 521  IRSLDSKAAKQGKKTDALSFLRNPQVSSLLQLRDIAFSGGADLNRSAAPRAVRTPAVRSV 580

Query: 753  IMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELT 808
              SRA SP SR+SSPPR+TTP PT  GL+  K   D+  + +E    EV +LRAQV+ L 
Sbjct: 581  ATSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLVKANELLSQEVERLRAQVDSLR 640

Query: 809  RKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPV------ 862
             +    E+EL ++ ++++EA+ +  EE+AK +AAK+VIKSLTAQLKDMAE LP       
Sbjct: 641  NRCDHHELELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLKDMAERLPPEHGAYD 700

Query: 863  ------------------------GAVRNS-NSFHSSPTPAWDVSSAAIEQPSSPLTFQG 897
                                    G +  + N   ++P+P    S  +    S+     G
Sbjct: 701  FNEAKQVHAPNGVEQHVATYSSMNGKIHQARNELLNAPSPNSGRSPHSNGGISNQHKLLG 760

Query: 898  AIPNGS----NSLILS--NGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDE--- 948
             I   S    +SL ++  +GSD    R+ S ++     ++  + N ++ A   Q  E   
Sbjct: 761  NISENSEGSTHSLRITSPHGSDRPHRRAHSNSDEMLSASSRADDNVSIDARSLQSSEDGY 820

Query: 949  ----------------WVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAA 992
                            W+EQ E GVYITL  L  G +DLKRVRFSR++F E QAE WW  
Sbjct: 821  KPRGTISISSNQVQAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAENWWNE 880

Query: 993  NRARVYQQYNVSMVDKSS 1010
            NR +VY++YNV   ++ S
Sbjct: 881  NREKVYEKYNVRSSERVS 898


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/920 (47%), Positives = 592/920 (64%), Gaps = 89/920 (9%)

Query: 157  HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAG 216
            + KG   D  R S+SSA S+SS GS  DD DSLGDV++WGE   D        R+ S   
Sbjct: 2    YTKGPPLDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSA-----RTSSDTV 56

Query: 217  V----KMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
            +    K D  +PK +ES +VLDV ++ CG RHA+LVT+ GEVF+WGE+ GGRLGHG   D
Sbjct: 57   IRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED 116

Query: 273  VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
              HP+L+++L   N++ VACGE HTCAVT +G++YTWG    N GLLGHG ++  W+P++
Sbjct: 117  SVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRR 176

Query: 333  LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 392
            ++GPLEG+ ++ VSCG WHTA++TS GQLFTFGDG+FGVLGHGD  S+S PREV+SL GL
Sbjct: 177  ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGL 236

Query: 393  RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA 452
            +T+  ACGVWHTAA+VEV+V + SS+  S+GKLFTWGDGD+ RLGHGDKEARL PTCVA+
Sbjct: 237  KTIAVACGVWHTAAIVEVIV-TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVAS 295

Query: 453  LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE 512
            L++ +F +V+CGHSLTV LTT+G V+TMG+ VYGQLG+  ++G+ P  VE K+    V +
Sbjct: 296  LIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-PCLVEDKIASEHVLQ 354

Query: 513  IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
            IACG YHVAVLTSR+EV+TWGKGANGRLGHGD +DR  P+ VEAL+D+ V+ I CG +FT
Sbjct: 355  IACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFT 414

Query: 573  AAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNK 632
            AAICLHKWVSG DQS CS CR PF F RKRHNCYNCGLV+C+ C+S+K+++A++AP+P K
Sbjct: 415  AAICLHKWVSGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGK 474

Query: 633  PYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMES 692
             +RVCD+C+ KL  A   SSS++      G  N         GE  V +S     ++M+ 
Sbjct: 475  LHRVCDSCYSKLKNA---SSSANKKDLAPGESN---------GEARVGKS--ILSSNMDM 520

Query: 693  LKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSR 752
            ++ ++S ++K+ KK +       P  + + Q   +  S  ++P   +  +  +A  P +R
Sbjct: 521  IRSLDSKAAKQGKKTDALSFLRNPQVSSLLQLRDIAFSGGADPNRPAVPR--AARTPAAR 578

Query: 753  IM--SRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEE 806
             +  SRA SP SRRSSPPR+TTP PT  GL+  K   D+  + +E    EV +LRAQV+ 
Sbjct: 579  SVTSSRAVSPFSRRSSPPRSTTPVPTTHGLSLSKSATDNLVKANELLSQEVERLRAQVDS 638

Query: 807  LTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPV---- 862
            L  +    E+EL ++ ++++EA+ +  EE+AK +AAK+VIKSLTAQLKDMAE LP     
Sbjct: 639  LRNRCDHHELELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLKDMAERLPPEHGA 698

Query: 863  --------------------------GAVRNS-NSFHSSPTPAWDVSSAAIEQPSSPLTF 895
                                      G V  + N   ++P+P    S  +    S+    
Sbjct: 699  YDFNEAKLVHVPNGVEPHVATYSSMNGKVHQARNELLNAPSPNSGRSPHSNGGISNQHKL 758

Query: 896  QGAIPNGS----NSLILS--NGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQ-GD- 947
             G I   S    +SL ++  +GSD    R+ S ++     ++  + N ++ A   Q GD 
Sbjct: 759  LGNISENSEGSTHSLRITSPHGSDRPHRRAHSNSDEMLSASSRGDDNVSIDARSLQNGDD 818

Query: 948  -----------------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWW 990
                             EW+EQ E GVYITL  L  G +DLKRVRFSR++F E QAE WW
Sbjct: 819  SYKPRGTISISSNQVQAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAENWW 878

Query: 991  AANRARVYQQYNVSMVDKSS 1010
              NR +VY++YNV   ++ S
Sbjct: 879  NENREKVYEKYNVRSSERVS 898


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/920 (47%), Positives = 592/920 (64%), Gaps = 89/920 (9%)

Query: 157  HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAG 216
            + KG   D  R S+SSA S+SS GS  DD DSLGDV++WGE   D        R+ S   
Sbjct: 2    YTKGPPLDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSA-----RTSSDTV 56

Query: 217  V----KMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
            +    K D  +PK +ES +VLDV ++ CG RHA+LVT+ GEVF+WGE+ GGRLGHG   D
Sbjct: 57   IRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED 116

Query: 273  VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
              HP+L+++L   N++ VACGE HTCAVT +G++YTWG    N GLLGHG ++  W+P++
Sbjct: 117  SVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRR 176

Query: 333  LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 392
            ++GPLEG+ ++ VSCG WHTA++TS GQLFTFGDG+FGVLGHGD  S+S PREV+SL GL
Sbjct: 177  ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGL 236

Query: 393  RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA 452
            +T+  ACGVWHTAA+VEV+V + SS+  S+GKLFTWGDGD+ RLGHGDKEARL PTCVA+
Sbjct: 237  KTIAVACGVWHTAAIVEVIV-TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVAS 295

Query: 453  LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE 512
            L++ +F +V+CGHSLTV LTT+G V+TMG+ VYGQLG+  ++G+ P  VE K+    V +
Sbjct: 296  LIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-PCLVEDKIASEHVLQ 354

Query: 513  IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
            IACG YHVAVLTSR+EV+TWGKGANGRLGHGD +DR  P+ VEAL+D+ V+ I CG +FT
Sbjct: 355  IACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFT 414

Query: 573  AAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNK 632
            AAICLHKWVSG DQS CS CR PF F RKRHNCYNCGLV+C+ C+S+K+++A++AP+P K
Sbjct: 415  AAICLHKWVSGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGK 474

Query: 633  PYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMES 692
             +RVCD+C+ KL  A   SSS++      G  N         GE  V +S     ++M+ 
Sbjct: 475  LHRVCDSCYSKLKNA---SSSANKKDLAPGESN---------GEARVGKS--ILSSNMDM 520

Query: 693  LKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSR 752
            ++ ++S ++K+ KK +       P  + + Q   +  S  ++P   +  +  +A  P +R
Sbjct: 521  IRSLDSKAAKQGKKTDALSFLRNPQVSSLLQLRDIAFSGGADPNRPAVPR--AARTPAAR 578

Query: 753  IM--SRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEE 806
             +  SRA SP SRRSSPPR+TTP PT  GL+  K   D+  + +E    EV +LRAQV+ 
Sbjct: 579  SVTSSRAVSPFSRRSSPPRSTTPVPTTHGLSLSKSATDNLVKANELLSQEVERLRAQVDS 638

Query: 807  LTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPV---- 862
            L  +    E+EL ++ ++++EA+ +  EE+AK +AAK+VIKSLTAQLKDMAE LP     
Sbjct: 639  LRNRCDHHELELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLKDMAERLPPEHGA 698

Query: 863  --------------------------GAVRNS-NSFHSSPTPAWDVSSAAIEQPSSPLTF 895
                                      G V  + N   ++P+P    S  +    S+    
Sbjct: 699  YDFNEAKQVHVPNGVEPHVATYSSMNGKVHQARNELLNAPSPNSGRSPHSNGGISNQHKL 758

Query: 896  QGAIPNGS----NSLILS--NGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQ-GD- 947
             G I   S    +SL ++  +GSD    R+ S ++     ++  + N ++ A   Q GD 
Sbjct: 759  LGNISENSEGSTHSLRITSPHGSDRPHRRAHSNSDEMLSASSRGDDNVSIDARSLQNGDD 818

Query: 948  -----------------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWW 990
                             EW+EQ E GVYITL  L  G +DLKRVRFSR++F E QAE WW
Sbjct: 819  SYKPRGTISISSNQVQAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAENWW 878

Query: 991  AANRARVYQQYNVSMVDKSS 1010
              NR +VY++YNV   ++ S
Sbjct: 879  NENREKVYEKYNVRSSERVS 898


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/923 (47%), Positives = 582/923 (63%), Gaps = 90/923 (9%)

Query: 159  KGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVK 218
            KG S D  R S+SSA S+SS GS  D+ DSLGDV++WGE   D  +  G     S  G +
Sbjct: 4    KGPSSDVLRASISSAPSTSSHGSAQDECDSLGDVYVWGEVVCDTSVRTGSDTVISSTG-R 62

Query: 219  MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
             D  +PK +ES +VLDV ++ CG +HAALV K GEVF+WGE+ GGRLGHG   D   P+L
Sbjct: 63   TDILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRL 122

Query: 279  IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
            +++L   NV+ VACGE HTCAVT +G++Y+WG    N GLLGHGN++  W+PK+++G LE
Sbjct: 123  VESLTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALE 182

Query: 339  GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
            G+ V+ VSCG WHTA++TS GQLFTFGDG+FGVLGHGD  SVS PREV+SL GL+T+  A
Sbjct: 183  GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVA 242

Query: 399  CGVWHTAAVVEVMVGSSSSS-NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
            CGVWHTAA+VEV+V  SSSS   S+GKLFTWGDGD+ RLGHGDKE RL PTCVA L++ +
Sbjct: 243  CGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHD 302

Query: 458  FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD 517
            F +V+CGHSLTVALTT+G V +MG+ VYGQLG+P ++G++P  VE K+    V +IACG 
Sbjct: 303  FYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACGS 362

Query: 518  YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            YHVAVLT R EV+TWGKGANGRLGHGD +DR  P+LVE LKD+ V+ I CG +FTAAIC 
Sbjct: 363  YHVAVLTGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIACGANFTAAICQ 422

Query: 578  HKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 637
            +KWVSG DQS CS CR PF F RKR NCYNCGLV+C+ C+S+K+++A++AP+P KPYRVC
Sbjct: 423  YKWVSGADQSQCSSCRQPFGFTRKRRNCYNCGLVHCNACTSRKALRAALAPSPGKPYRVC 482

Query: 638  DNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVE 697
            D+CF KL  A++ ++++      R      +     +G+  V ++     ++M+ ++ ++
Sbjct: 483  DSCFLKLNNASDPNAAN------RRKDPVPYQPVESNGDAKVGKA--SLPSNMDMIRNLD 534

Query: 698  SGSSKRNKKQE---FNR----TRGLPLPN-GVSQGNALNNSKSSNPVFGSTKKFFSASLP 749
              ++++ KK +   F R    +  L L +  +S G  +N          S  +    S  
Sbjct: 535  IKAARQGKKTDGLSFLRNPQVSSLLQLSDIALSGGLGMNR---------SAPRAVRISAA 585

Query: 750  GSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVE 805
             S   SRA SP SR+ SPPR+TTP PT  GL+  K   D+  +  E    EV +LRAQV+
Sbjct: 586  RSVTTSRAVSPFSRKPSPPRSTTPVPTAHGLSLSKSATDNIVKAHELLNQEVERLRAQVD 645

Query: 806  ELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVG-A 864
             L  + +LQE+EL+++ ++++EA+ +  EE+AK +AAK+VIKSLTAQLKDMAE LP    
Sbjct: 646  NLRNRCELQELELQKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLKDMAERLPPDHG 705

Query: 865  VRNSNSFHSSPTPAWDVSSAA-------IEQPSSPLTFQGAIPNGSNS------------ 905
              N N    S  P    S  A       I Q  + L F  +I +  NS            
Sbjct: 706  AYNVNETKQSHIPNGIESHVASYSSMNGIHQTRNEL-FNASIAHSPNSGRSSHCNGISGQ 764

Query: 906  -LILSNGSDFGD------------------NRSPSQTEASHCEATTKNKNRTMKAEPAQG 946
              +L N S+  D                   R+ S ++      +  + N +M A   Q 
Sbjct: 765  HKLLGNVSEHSDCSTHSLRITSPHDSELPNRRARSSSDEMLTAGSRVDDNVSMDAMSLQS 824

Query: 947  D-------------------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAE 987
                                EW+EQ E GVYITL  L  G +DLKRVRFSR++F E QAE
Sbjct: 825  GEDGYKPRGTISLPSNQVQAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAE 884

Query: 988  QWWAANRARVYQQYNVSMVDKSS 1010
             WW  NR +VY++YNV   ++ S
Sbjct: 885  NWWNENREKVYERYNVKSSERVS 907


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
            distachyon]
          Length = 913

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/919 (46%), Positives = 594/919 (64%), Gaps = 81/919 (8%)

Query: 157  HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAG 216
            + KG S D  R S+SSA S+SS GS  DD DSLGDV++WGE   D        R+ S   
Sbjct: 2    YTKGPSSDVLRASISSAPSTSSHGSAPDDCDSLGDVYVWGEVVCDNSA-----RTSSDTV 56

Query: 217  V----KMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
            +    K D  +PK +ES +VLDV ++ CG RHA+LVT+ GEVF+WGE+ GGRLGHG   D
Sbjct: 57   IRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTRED 116

Query: 273  VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
              HP+L+++L   N++ VACGE HTCAVT +G++YTWG    N GLLGHG ++  W+P++
Sbjct: 117  SVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRR 176

Query: 333  LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 392
            ++G LEG+ V+ VSCG WHTA++TS GQLFTFGDG+FGVLGHG+  S+S PREV+SL GL
Sbjct: 177  ISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGL 236

Query: 393  RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA 452
            +T+  ACGVWHTAA+VEV+V + SS+  S+GKLFTWGDGD+ RLGHGDKEARL PTCVA+
Sbjct: 237  KTIAVACGVWHTAAIVEVIV-TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVAS 295

Query: 453  LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE 512
            L++ +F +V+CGHSLTV LTT+G V+TMG+ VYGQLG+P ++G+ P  V  K+T   V +
Sbjct: 296  LIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGR-PCLVGDKITNEHVLQ 354

Query: 513  IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
            +ACG YHV+VLTSR+EV+TWGKGANGRLGHGD +D+  P+LVEALKD+ V+ I CG +FT
Sbjct: 355  VACGSYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSVRHIACGANFT 414

Query: 573  AAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNK 632
            AAICLHKWVSG DQS CS CR PF F RKRHNCYNCGLV+C+ C+S+K+++A++APNP K
Sbjct: 415  AAICLHKWVSGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGK 474

Query: 633  PYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMES 692
             +RVCD+CF KL  A+++SS+     +++  +    +    +GE  V +S     ++M+ 
Sbjct: 475  LHRVCDSCFSKLKNASDSSSA-----NKKKDLAPHLS-GESNGEVRVGKS--ILPSNMDM 526

Query: 693  LKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSR 752
            ++ ++S ++K+ KK +       P  + + Q   +  S   + +  S  +    S   S 
Sbjct: 527  IRSLDSKAAKQGKKTDALSFLRNPQVSSLMQLRDIAFSGGID-LNRSVPRAVRTSAVRSV 585

Query: 753  IMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELT 808
              SRA SP SR+SSPPR+TTP PT  GL+  K   D+  +T+E    EV +LRAQV+ L 
Sbjct: 586  TSSRAVSPFSRKSSPPRSTTPIPTTHGLSFSKSATDNLVKTNEFLNQEVERLRAQVDNLR 645

Query: 809  RKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLP------- 861
             + +  E+EL ++ ++++EA+ +  EE+A+ +AAK+VIKSLTAQLKDMAE LP       
Sbjct: 646  HRCEHHELELHKSAKKVQEAMTLVAEESARSKAAKEVIKSLTAQLKDMAERLPPEHGAYD 705

Query: 862  ----------------VGAVRNSNSFHSSPTPAWDVSSA-AIEQPSSP----LTFQGAIP 900
                            V    + N  H S     + S+A +     SP    ++ Q  +P
Sbjct: 706  CNETKQVHNQNGMEPHVAVYSSLNGVHQSRNELLNASNAHSPNSARSPHQNGISSQHKLP 765

Query: 901  NG--------SNSLILS--NGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDE-- 948
                      ++SL ++  + SD    R+ S ++      +  + N ++ A   Q  E  
Sbjct: 766  GNISENSEGSTHSLRITSPHESDRPHRRAHSNSDEMLSANSRADDNVSIDARSLQSGEDG 825

Query: 949  -----------------WVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWA 991
                             W+EQ E GVYITL  L  G +DLKRVRFSR++F E QAE WW 
Sbjct: 826  YRPRGTVSISSNQVQAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAENWWN 885

Query: 992  ANRARVYQQYNVSMVDKSS 1010
             NR +VY++YNV   ++ S
Sbjct: 886  GNREKVYERYNVRSSERVS 904


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/922 (46%), Positives = 588/922 (63%), Gaps = 99/922 (10%)

Query: 157  HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGG---IHRSGS 213
            H +G S D  R S+SSA S+SS GS  DD DSLGDV++WGE   +  +  G   I RS  
Sbjct: 79   HTRGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSVRVGSDTIIRSTE 138

Query: 214  YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
                K D  +PK +ES +VLDV ++ CG RHAALVT+ G+VF+WGE+ GGRLGHG   D 
Sbjct: 139  ----KTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 194

Query: 274  SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
             HP+L+++L   NV+ VACGE HTCAVT +G++YTWG    N GLLGHG +   W+PK++
Sbjct: 195  VHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRI 254

Query: 334  NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 393
            +G L+G+ V+ VSCG WHTA++TS GQLFTFGDG+FGVLGHG+  S+S P+EV+SL GL+
Sbjct: 255  SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLK 314

Query: 394  TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
            T+  ACGVWHTAA+VEV+V  SSSS  S+GKLFTWGDGD+ RLGHGDKE+RL PTCVA+L
Sbjct: 315  TIAVACGVWHTAAIVEVIVTHSSSS-VSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASL 373

Query: 454  VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
            ++ +F +V+CGHSLTV LTT+G V +MG+ VYGQLG+P ++G+LP  VE ++    V ++
Sbjct: 374  IDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQV 433

Query: 514  ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
            ACG YHVAVLT R+EV+TWGKGANGRLGHGD +DR  P+ VEALKD+ V+ I CG +FTA
Sbjct: 434  ACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTA 493

Query: 574  AICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKP 633
            AICLHKWVSG DQS CS C+ PF F RKRHNCYNCGLV+C+ C+S+K+++A++APNP KP
Sbjct: 494  AICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKP 553

Query: 634  YRVCDNCFGKLTKATETSS--SSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSME 691
            YRVCD+CF KL  A+++ S       VS     + G  +A          S     ++M+
Sbjct: 554  YRVCDSCFLKLKNASDSDSFNKRKDIVSHLAGESNGDTKA----------SKTILSSNMD 603

Query: 692  SLKKVESGSSKRNKKQE---FNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASL 748
             ++ ++S ++++ KK +   F RT   P  + + Q   +  S S++ +  S  +    S 
Sbjct: 604  IIRSLDSKAARQGKKTDALSFLRT---PQVSSLLQLRDIALSGSAD-MNRSVPRAVRTSA 659

Query: 749  PGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQV 804
              S   SRA SP SR+SSPPR+TTP PT  GL+  K   D+  +T+E    E+ +L AQV
Sbjct: 660  VRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQV 719

Query: 805  EELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLK---------- 854
            + L  + + QE+EL ++ ++++EA+ +  EE+AK +AAK+VIKSLTAQLK          
Sbjct: 720  DNLRHRCEHQEVELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLKDMAERIPPEQ 779

Query: 855  ---DMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPL----------TFQGAIPN 901
               D++E  PV  V N    H +   + +V+     QP + L          + +   PN
Sbjct: 780  GTYDVSEAKPV-HVPNGIDSHIAIYSSINVA----HQPRNELLNASNAQSLNSGRSLHPN 834

Query: 902  G--SNSLILSNGSDFGDNRSPSQTEASHCEATTKNK-----NRTMKAEPAQGD------- 947
            G  S   +L N ++  +  + S    S C+    ++     +  M     +GD       
Sbjct: 835  GISSQHRLLGNATEASEGSAQSHRITSPCKLDVPHRRAHSNSDDMLTASHRGDDNVSIDA 894

Query: 948  --------------------------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKF 981
                                      EW+EQ E GVYITL  L  G +DLKRVRFSR++F
Sbjct: 895  MSLQNGEDGYKPRGTVSSISSSQVQAEWIEQYEPGVYITLTTLLDGTRDLKRVRFSRRRF 954

Query: 982  SEKQAEQWWAANRARVYQQYNV 1003
             E QAE+WW  NR +VY++YNV
Sbjct: 955  GEHQAEKWWNENREKVYERYNV 976


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica Group]
          Length = 917

 Score =  793 bits (2049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/922 (46%), Positives = 587/922 (63%), Gaps = 99/922 (10%)

Query: 157  HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGG---IHRSGS 213
            H +G S D  R S+SSA S+SS GS  DD DSLGDV++WGE   +  +  G   I RS  
Sbjct: 2    HTRGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSVRVGSDTIIRSTE 61

Query: 214  YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
                K D  +PK +ES +VLDV ++ CG RHAALVT+ G+VF+WGE+ GGRLGHG   D 
Sbjct: 62   ----KTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 274  SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
             HP+L+++L   NV+ VACGE HTCAVT +G++YTWG    N GLLGHG +   W+PK++
Sbjct: 118  VHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRI 177

Query: 334  NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 393
            +G L+G+ V+ VSCG WHTA++TS GQLFTFGDG+FGVLGHG+  S+S P+EV+SL GL+
Sbjct: 178  SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLK 237

Query: 394  TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
            T+  ACGVWHTAA+VEV+V  SSSS  S+GKLFTWGDGD+ RLGHGDKE+RL PTCVA+L
Sbjct: 238  TIAVACGVWHTAAIVEVIVTHSSSS-VSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASL 296

Query: 454  VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
            ++ +F +V+CGHSLTV LTT+G V +MG+ VYGQLG+P ++G+LP  VE ++    V ++
Sbjct: 297  IDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQV 356

Query: 514  ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
            ACG YHVAVLT R+EV+TWGKGANGRLGHGD +DR  P+ VEALKD+ V+ I CG +FTA
Sbjct: 357  ACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTA 416

Query: 574  AICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKP 633
            AICLHKWVSG DQS CS C+ PF F RKRHNCYNCGLV+C+ C+S+K+++A++APNP KP
Sbjct: 417  AICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKP 476

Query: 634  YRVCDNCFGKLTKATETSS--SSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSME 691
            YRVCD+CF KL  A ++ S       VS     + G  +A          S     ++M+
Sbjct: 477  YRVCDSCFLKLKNALDSDSFNKRKDIVSHLAGESNGDTKA----------SKTILSSNMD 526

Query: 692  SLKKVESGSSKRNKKQE---FNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASL 748
             ++ ++S ++++ KK +   F RT   P  + + Q   +  S S++ +  S  +    S 
Sbjct: 527  IIRSLDSKAARQGKKTDALSFLRT---PQVSSLLQLRDIALSGSAD-MNRSVPRAVRTSA 582

Query: 749  PGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQV 804
              S   SRA SP SR+SSPPR+TTP PT  GL+  K   D+  +T+E    E+ +L AQV
Sbjct: 583  VRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQV 642

Query: 805  EELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLK---------- 854
            + L  + + QE+EL ++ ++++EA+ +  EE+AK +AAK+VIKSLTAQLK          
Sbjct: 643  DNLRHRCEHQEVELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLKDMAERIPPEQ 702

Query: 855  ---DMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPL----------TFQGAIPN 901
               D++E  PV  V N    H +   + +V+     QP + L          + +   PN
Sbjct: 703  GTYDVSEAKPV-HVPNGIDSHIAIYSSINVA----HQPQNELLNASNAQSLNSGRSLHPN 757

Query: 902  G--SNSLILSNGSDFGDNRSPSQTEASHCEATTKNK-----NRTMKAEPAQGD------- 947
            G  S   +L N ++  +  + S    S C+    ++     +  M     +GD       
Sbjct: 758  GISSQHRLLGNATEASEGSAQSHRITSPCKLDVPHRRAHSNSDDMLTASHRGDDNVSIDA 817

Query: 948  --------------------------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKF 981
                                      EW+EQ E GVYITL  L  G +DLKRVRFSR++F
Sbjct: 818  MSLQNGEDGYKPRGTVSSISSSQVQAEWIEQYEPGVYITLTTLLDGTRDLKRVRFSRRRF 877

Query: 982  SEKQAEQWWAANRARVYQQYNV 1003
             E QAE+WW  NR +VY++YNV
Sbjct: 878  GEHQAEKWWNENREKVYERYNV 899


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/1026 (44%), Positives = 633/1026 (61%), Gaps = 105/1026 (10%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALIS---RSHYRKGRA 60
            +F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+ E EVWF+ L+ LI+   +S+   G +
Sbjct: 67   VFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQAEVEVWFSTLETLITSCRKSYSVDGPS 126

Query: 61   E--SRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDK 118
            +  S SDEVS        H Q                                     D 
Sbjct: 127  DRLSISDEVS--------HYQ-------------------------------------DN 141

Query: 119  ALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSD---GRTGHLKGLSGDTFRVSLSSAVS 175
            A  D  L  A       + +   + NSL+S  +D    R   L+  S D+ R+S+SSA S
Sbjct: 142  AFHDTTLDIASSITRTFNSAGYSTNNSLNSAKTDVVSDRANMLRA-STDSSRLSISSAPS 200

Query: 176  SSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDV 235
            SSSQGSG DD +SLGDV++WGE   D I   G   S +Y   K D  +PK +ES VVLDV
Sbjct: 201  SSSQGSGQDDIESLGDVYVWGEVWTDVIPAEG---STNYLCSKADILIPKPLESDVVLDV 257

Query: 236  QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
            Q IACG RH AL T+QGEVF+WGEELGGRLGHG D+D+S PKL++AL   NVE +ACGE 
Sbjct: 258  QQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGEF 317

Query: 296  HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
            HTCAVT SGD+YTWG    N GLLG+G   S WLPK+++GPLEG+ V SVSCG WH+A+ 
Sbjct: 318  HTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSALT 377

Query: 356  TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            TS+G++FTFGDGTFG LGHG R +V  P+EV++L G RT++ ACG+WH+AA+VE    + 
Sbjct: 378  TSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAIVES--SNH 435

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
             S N  S KL+TWG GD+ +LGHGDK++RLVPTCV +L++ +F QV+CGHS+T+AL+T+G
Sbjct: 436  VSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSFHQVACGHSMTIALSTSG 495

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            HV+TMGS   GQLG+PK++GK P  V+ +L+   VEEI+CG  HVAVLTSR+EVYTWG G
Sbjct: 496  HVFTMGSSSNGQLGNPKSDGKQPIPVQDRLSGELVEEISCGSCHVAVLTSRSEVYTWGMG 555

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIP 595
            ANGRLGHG  +D+  P+LVEALKD+ VKSI CG++FT  IC+HKWVSG DQS+CSGCR P
Sbjct: 556  ANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCICIHKWVSGADQSVCSGCRQP 615

Query: 596  FNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSH 655
            F F RKRHNCYNCGLV+CH CSS+K +KA++AP P KP+RVCD+CF KL  A  +++SSH
Sbjct: 616  FGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKLKAADTSNNSSH 675

Query: 656  ---STVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE-FNR 711
               + ++RR   ++  +E  E     +  S +  G++ E LK+ E    +   K +  + 
Sbjct: 676  GKRNAIARRSVDSKDRSERPE-----IRPSRLATGSTAEPLKQAEIKPVRNEIKPDPMST 730

Query: 712  TRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRAT 771
             R   +P+ +   N    +    P   S K    A +P +  MS+  SP +++  PP  T
Sbjct: 731  MRAPQVPSVLPFNNLAFGATFGGP--ASLKPMVMAPMPMAMPMSQ--SPLTKKPCPP-TT 785

Query: 772  TPTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAV 831
            TP    S   + KI     +  +E++ KL++QV +L +K   QE +L++  R+ + + ++
Sbjct: 786  TPLCGKSETDNLKIA---KQVLNEDIAKLQSQVNKLKQKCDAQEEQLQKAERRAENSNSI 842

Query: 832  AGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSS 891
            A EE+++     + I+ L  +LK +A+ +P   V N  +  +             EQ   
Sbjct: 843  AAEESSRRNGVLEFIRFLDNELKSIADRVPSDVVDNLKTLQNHS------ERFLTEQGMR 896

Query: 892  PLTFQGAIPNGSN--SLILSNGSDFGDNRSPSQTEASH--CEATTKNKNRTMKAEPAQGD 947
            PL   G     ++  + ++S   + G   S + + AS   C    +N +R      A GD
Sbjct: 897  PLEVTGTHRKSASIGNFVMSQDGNAGTASSSTVSLASESPCHRIMENSSR------ANGD 950

Query: 948  -----------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRAR 996
                       + +EQ E GVY+TL+ L  G K  KRVRFS+++F+E+QAE+WW  N+ R
Sbjct: 951  LAPKLGTHGEVQLIEQFEPGVYVTLIQLRDGTKVFKRVRFSKRRFAEQQAEEWWRENQER 1010

Query: 997  VYQQYN 1002
            V+++YN
Sbjct: 1011 VFRKYN 1016


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
            distachyon]
          Length = 1007

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/1035 (43%), Positives = 620/1035 (59%), Gaps = 136/1035 (13%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAE-- 61
            +F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+ E EVWF+ L+ LI+       +++  
Sbjct: 67   VFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQAEVEVWFSTLETLITSCRVTDCQSDRV 126

Query: 62   SRSDEVSSVATSPRAHT--QRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKA 119
            S SDEV+    S    T    +S ++  F S G S  + L+                   
Sbjct: 127  SFSDEVTQYQDSNLYGTTVDIASSITRTFNSAGYSTANSLN------------------- 167

Query: 120  LSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSS- 178
                                    +S +  GSD R   L+  +GD+ R+S+SS++ SSS 
Sbjct: 168  ------------------------SSRADVGSD-RANMLRVSTGDSSRISISSSIPSSSS 202

Query: 179  QGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNI 238
            QGSG DD +SLGDV++WGE   D I   G   S +    K D  +PK +ES VVLDVQ I
Sbjct: 203  QGSGPDDIESLGDVYVWGEVWTDVIPSEG---SSNLVCSKTDVLIPKPLESDVVLDVQQI 259

Query: 239  ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
            +CG RH AL T+QGEVF+WGEELGGRLGHG D D+S PKL+++L   NVE +ACGE HTC
Sbjct: 260  SCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTC 319

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            AVT SGD+Y WG  + N GLLGHG   S WLPK+++GPLEG+ V SV+CG WH+A+  S+
Sbjct: 320  AVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSALAMSS 379

Query: 359  GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            G++FTFGDGTFG LGHG+R +V+ P+EV+SL G RT++ ACGVWH+AA+VE    S +  
Sbjct: 380  GKVFTFGDGTFGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAAIVETT--SQTGV 437

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
            N  S KLFTWGDGD+ RLGHGDKEARLVPT V ALV+ NF QV+CG+S+T+AL T+GHV+
Sbjct: 438  NMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQVACGYSMTIALATSGHVF 497

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
            TMGS  YGQLG+PKA+GK P +V+ KL+   VEEI+CG YHVAVLTSR+EVYTWG GANG
Sbjct: 498  TMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTWGMGANG 557

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNF 598
            RLGHG  +D+  P++V+ALKD+ VKSI CG++FT  IC+HKWVSG DQS+CSGCR PF F
Sbjct: 558  RLGHGGIEDKKKPTIVDALKDRHVKSIACGSNFTTCICIHKWVSGADQSVCSGCRQPFGF 617

Query: 599  KRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSH--- 655
             RKRHNCYNCGLV+CH CSS+K +KA++AP P KP+RVCD+CF KL  A   S+S +   
Sbjct: 618  TRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKLKAADSGSNSPYNKK 677

Query: 656  STVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGL 715
            S ++RR   +    E  E  +  +  S +      E +K  ++ S + + K         
Sbjct: 678  SVITRR---SVDIKEKSERPD--IRPSRLATAAPAEPMKHADTKSVRNDVK--------- 723

Query: 716  PLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRA----TSPTSRRSSPPRAT 771
                                             P    M+RA    + PT+   + P+ +
Sbjct: 724  ---------------------------------PDPTTMARAPQALSVPTTVSPAQPKKS 750

Query: 772  TPTP-TLSGLA---SPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTR 823
             P+P T+S LA     K   D  K+T E    E+ KL+ QV +L +K ++Q+ +L+++ +
Sbjct: 751  NPSPATVSPLAIKSDTKSDTDGMKKTIETLNQELSKLQTQVTKLKQKCEVQDEQLQKSEK 810

Query: 824  QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSP----TPAW 879
            + K A ++A EE+A+  A  D ++ L ++LK +A+ +P     +  +  S      T   
Sbjct: 811  RAKSAASLASEESARRNAVLDFVRFLDSELKGVADQVPTEFTDSIKTLQSHSEKFLTGQC 870

Query: 880  DVSSAAIEQPSSPLTFQGAIPNGSN-------SLILSNGSDFGDNRSPSQTEASHCEATT 932
                  I     P    G +   ++       +L+LS   D       S T  S C    
Sbjct: 871  SHPPEGIPGHDQPRLSSGGLHEIAHHRSASMGNLVLSQ--DGSSAAGISMTSESPCHRLM 928

Query: 933  KNKNRTM-KAEPAQGD----EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAE 987
            ++  R      P  G     + +EQ E GVY+TL+ +  G K  KRVRFS+++F+E+QAE
Sbjct: 929  ESNGRAPGDFAPKYGTHGEVQLIEQFEPGVYVTLIQMRDGTKVFKRVRFSKRRFAEQQAE 988

Query: 988  QWWAANRARVYQQYN 1002
            +WW  N+ RV+++YN
Sbjct: 989  EWWRENQERVFRKYN 1003


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
            [Zea mays]
          Length = 1009

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/1023 (44%), Positives = 619/1023 (60%), Gaps = 110/1023 (10%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALIS---RSHYRKGRA 60
            +F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+ E EVWF+ L+ALI+   +S+   G +
Sbjct: 67   VFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQAEVEVWFSTLEALITSCRKSYSADGPS 126

Query: 61   E--SRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDK 118
            +  S SDEVS        H Q                    D  H            LD 
Sbjct: 127  DRLSVSDEVS--------HYQ--------------------DTFH---------DTTLDI 149

Query: 119  ALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSS 178
            A                  S   + NS  +     R   L+  S D+ R+S+SSA SSSS
Sbjct: 150  A-----------------SSITRTFNSAKTDVVSDRANMLRA-STDSSRLSISSAPSSSS 191

Query: 179  QGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNI 238
            QGSG DD +SLGDV++WGE   D I   G   S +Y   K D  +PK +ES VVLDVQ I
Sbjct: 192  QGSGQDDIESLGDVYVWGEVWTDMIPAEG---SANYLCSKADILIPKPLESDVVLDVQQI 248

Query: 239  ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
            ACG RH AL T+QGEVF+WGEELGGRLGHG D+D+S PKL++AL   NVE VACGE HTC
Sbjct: 249  ACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFHTC 308

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A+T SGD+YTWG    N GLLGHG   S WLPK+++GPLEG+ V SVSCG WH+A+ TS+
Sbjct: 309  AITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSS 368

Query: 359  GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            G++FTFGDGTFG LGHG+R +V+ P+EV++L G RT++ ACG+WH+AA+VE    + +  
Sbjct: 369  GKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIVETT--NQAGV 426

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
            N  S KLFTWG GD+  LGHGDK+ARLVPTCV +L++ NF QV+CGHS+T+AL+T+GHV+
Sbjct: 427  NVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQVACGHSMTIALSTSGHVF 486

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
            TMGS   GQLG+PK++GK PT V+ +L    VEEI+CG  HVAVLTSR+EVYTWG GANG
Sbjct: 487  TMGSSSNGQLGNPKSDGKHPTPVQDRLAGELVEEISCGSCHVAVLTSRSEVYTWGMGANG 546

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNF 598
            RLGHG  +D+  P+LVEALKD+ VKSI CG++FT  IC+HKWVSG DQS+CSGCR PF F
Sbjct: 547  RLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCICIHKWVSGADQSVCSGCRQPFGF 606

Query: 599  KRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHS-- 656
             RKRHNCYNCGLV+CH CSSKK +KA++AP P KP+RVCD+CF KL  A  +S+SSHS  
Sbjct: 607  TRKRHNCYNCGLVHCHACSSKKVLKAALAPTPGKPHRVCDSCFMKLKAAETSSNSSHSKR 666

Query: 657  -TVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGL 715
              ++RR   ++  +E  E     +  S +  G++ E LK+ E  + +   K +   T   
Sbjct: 667  NAIARRSVDSKDRSERPE-----IRSSRLATGSTAEPLKQAELKAVRNEIKPDPMSTMRA 721

Query: 716  PLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTP 775
            P    +   N L    +    FG        ++    +    +     +   P A TP  
Sbjct: 722  PQVPSMLPFNNL----AFGATFGGPASLKPMTMAPMPMAMPMSPAPLTKKPTPAAATP-- 775

Query: 776  TLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEE 835
             L G +    +    +  +E++ KL++QV +L +K   QE +L++  R+ + + + A EE
Sbjct: 776  -LCGKSDTDNLKMAKQVLNEDISKLQSQVNKLKQKCDAQEEQLQKAERRAEHSASTAAEE 834

Query: 836  TAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTF 895
            +++     + I+ L  +LK +A+ +P  A     +  +             EQ   PL  
Sbjct: 835  SSRRNGVLEFIRFLDNELKSIADRVPSDAADGLKALQNHS------ERFLTEQGVRPLEA 888

Query: 896  QGAIPNGSN--SLILSNGSDFGDNRSPSQTEASH--CEATTKNKNRTMKAEPAQGD---- 947
             G     ++  +L++S     G+  S + + AS   C    +N +R      A GD    
Sbjct: 889  TGMHRKCASIGNLVMSQDGSAGNASSSAASLASESPCHRIMENSSR------ANGDLAPK 942

Query: 948  --------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQ 999
                    + +EQ E GVY+TL+ L  G K  KRVRFS+++F+E+QAE+WW  N+ RV++
Sbjct: 943  LGGTHGEVQLIEQFEPGVYVTLIQLRDGTKVFKRVRFSKRRFAEQQAEEWWRENQERVFR 1002

Query: 1000 QYN 1002
            +YN
Sbjct: 1003 KYN 1005


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
            protein [Zea mays]
          Length = 1056

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/903 (46%), Positives = 573/903 (63%), Gaps = 87/903 (9%)

Query: 157  HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAG 216
             +K +S    R+S+SSA+S+SS GSG +D +S GD+++WGE   D I   G  RS    G
Sbjct: 187  QVKSVSSSDIRISVSSALSTSSHGSGGEDSESFGDIYVWGEVICDTISRSGSDRSAYSPG 246

Query: 217  VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
               D  VPK +ES V+LDV  +ACG +HAALVT+Q EVF+WGEE  GRLGHG+ ++V  P
Sbjct: 247  TTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNVFQP 306

Query: 277  KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
            +L+++L   NVEL+ACGE HTCAVT +GD+YTWG    N GLLGHG+ +S W+PK+++GP
Sbjct: 307  RLVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGP 366

Query: 337  LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
            L+G+ VS+VSCG WHTA++TS+GQL+TFGDGTFGVLGHG+R S S P+EV+SLKGLRT+ 
Sbjct: 367  LDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTIS 426

Query: 397  AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
             +CGVWHTAAVVEV++   S SN SSGKLFTWGDGD+ RLGHGD+ ++L PTCV +L++ 
Sbjct: 427  VSCGVWHTAAVVEVII---SQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY 483

Query: 457  NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
            NF + +CGH+LT+ LTT+GH++T+GSPVYGQLG+P  +G+ P  VE +L    V E+ACG
Sbjct: 484  NFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGNPNNDGRYPRLVEEQLGGGGVVEVACG 543

Query: 517  DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
             YHVAVLT+  EVYTWGKG NGRLGHGD  DR  P+LVEALKD+ VK + CG+SFTAAIC
Sbjct: 544  SYHVAVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSSFTAAIC 603

Query: 577  LHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRV 636
             HKWVSG++QS CS CR PF F RKRHNCYNCGLV+CH+CSSKK+++A+++PNP KPYRV
Sbjct: 604  QHKWVSGMEQSQCSACRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRV 663

Query: 637  CDNCFGKLTKATETS-SSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKK 695
            CD+C+ KL+K  ++  S S +T+ R     +   E ++     V++S+     S + ++ 
Sbjct: 664  CDSCYVKLSKVLDSGVSYSRNTIPRLPGDTKA--ERIDTKATRVAQSN-----SSDMIRN 716

Query: 696  VESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMS 755
            ++  ++K+ KK E++                     S  P     K     S P    + 
Sbjct: 717  LDVKAAKQTKKSEYS---------------------SQVPATLQLKDIPFISAPD---LQ 752

Query: 756  RATSPTSRRSSPPRATTPTPTLSGL--------ASPKIVVDDAKRTSEEVIKLRAQVEEL 807
              ++  ++    PR+T P+  +  L         S + + D  +   +EV KL+A+V  L
Sbjct: 753  NLSTVANQYPYDPRSTLPSLRMPYLNYSSSMSSESSESLKDANELLKQEVQKLQAEVNSL 812

Query: 808  TRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGA--- 864
             ++ + Q+ EL++   + +EA+ +A EE +K + AKDVI SLTAQLK+M+E LP GA   
Sbjct: 813  RQEREQQDAELQKADAKAREAMNLATEEASKLKTAKDVINSLTAQLKEMSERLPPGACDV 872

Query: 865  -------------------VRNSNSFHSSPTPAWDVSSAA------------------IE 887
                               +R  + F   P   +  S+ +                  + 
Sbjct: 873  KNNGRVMGDLAPEMGREKQMRYGDRFSGLPAQVYQTSNYSETAMVPPQGSSRSEHVDGVR 932

Query: 888  QPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGD 947
            +  SP+  Q A   GS ++     SD  D R   + + +     T++ N       A   
Sbjct: 933  EFFSPVQ-QMANGGGSTTIGYRYRSDDHDRRETDRFQINLQSLNTRSSNSPSNQVDA--- 988

Query: 948  EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVD 1007
            EW+EQ E GVY+TLV+L  G K+LKRVRFSR++F E QAE WW  N  +VY +YNV   D
Sbjct: 989  EWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQAESWWKDNCEKVYDKYNVCGTD 1048

Query: 1008 KSS 1010
            + S
Sbjct: 1049 RLS 1051



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/52 (67%), Positives = 41/52 (78%), Gaps = 2/52 (3%)

Query: 6   IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHY 55
           +FQR+  PEK++ SFSLIYND  RSLDLICK+K EAE WFTGL ALI R  +
Sbjct: 70  VFQRFLLPEKDHLSFSLIYNDGKRSLDLICKNKVEAEAWFTGLSALICRGQH 121


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/1056 (44%), Positives = 627/1056 (59%), Gaps = 161/1056 (15%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +F+RY RPEK+Y SFSL+YN  +RSLDL+ +     EVW  GL+ALIS   +R  R  S 
Sbjct: 77   VFRRYLRPEKDYLSFSLLYNNGERSLDLVSEMGLFTEVWLAGLQALISTGQHRNRRTRSD 136

Query: 64   SDEV------SSVATSPRAHTQRSSP-------LSSPFGSGGSSQKDGLDPLHLHTSYES 110
              +V        +      + Q++         +   F  GG   ++G  P  ++  + S
Sbjct: 137  IPDVRISFQHQYIYAYVNIYLQKNGTFICYIYIMLFQFHDGGDFIQNG-RPFGVNLDFAS 195

Query: 111  PP---KNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFR 167
                 ++ +D +  D+ L  A                  S  GS+     L+    D FR
Sbjct: 196  SIARGRSSVDLSSRDSSLNWAS-----------------SDAGSERTNMQLRTSGVDGFR 238

Query: 168  VSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAV 227
            +S+SS  S SSQGSG DD +SLGDV++WGE                              
Sbjct: 239  ISVSSTPSCSSQGSGPDDIESLGDVYVWGE------------------------------ 268

Query: 228  ESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV 287
                      IACG RH ALVT+QGEVF+WGEE GGRLGHG+D+D S P L++ L   NV
Sbjct: 269  ----------IACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNV 318

Query: 288  ELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 347
            + VACGE+HTCAV+ SGD++TWG    N GLLGHG E+S W+PK+++GPLEG+ V SV+C
Sbjct: 319  DFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVAC 378

Query: 348  GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
            G WH+A+ TS G+LFTFGDGTFGVLGHGDR SV  PREV  L GL+T++ ACGVWHTAA+
Sbjct: 379  GTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAI 438

Query: 408  VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
            +EVM  S S +N SS KLFTWGDGD+ RLGHG KE  L+PTCV+AL++ NF Q++CGH++
Sbjct: 439  IEVM--SQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTM 496

Query: 468  TVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
            TVALTT+GHV+TMG   YGQLG+P ++G+LP  V+ KL   FVEEI+CG YHVAVLTSR+
Sbjct: 497  TVALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRS 556

Query: 528  EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQS 587
            EV+TWG+GANGRLGHGDT+DR  P+ VEALKD+ VKSI CG++FTA+IC+HKWVSG DQS
Sbjct: 557  EVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSGADQS 616

Query: 588  MCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKA 647
            +CSGCR  F F RKRHNCYNCGLV+CH CSSKK++KA++AP P KP+RVCD C+ KL KA
Sbjct: 617  VCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDPCYAKL-KA 675

Query: 648  TETSSSS----HSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFG-TSMESLKKVESG--- 699
             E   +S     +TV RR S++       + GE   +R  +  G  +    K    G   
Sbjct: 676  AEAGDASIFNRKNTVPRR-SIDATIRS--DRGEVRSARILMSPGPINYFEFKPARLGPRP 732

Query: 700  --SSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRA 757
              S      Q  +  + +  P+ +S   AL N+    PV  ++ +  +   P     SR 
Sbjct: 733  DPSPMIQSSQGPSLLKDIAFPSSLS---ALQNAL--KPVITASPQ-TAPPPPPQPAFSRP 786

Query: 758  TSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQL 813
             SP SRR SPPR+  P  + S       V+D  K+T+E    EV KL+ QV  L +KS+ 
Sbjct: 787  VSPYSRRPSPPRSAGPVFSRS-------VIDSLKKTNELLNQEVTKLQNQVRSLKQKSEG 839

Query: 814  QEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQ------------LKDMAEMLP 861
            Q+ E+++  +  +EA  +A EE++KC  AK+V+KS+T Q            LK+M + LP
Sbjct: 840  QDAEIQKLRKNAQEADLLALEESSKCTVAKEVVKSITTQDYLESAHESTNLLKEMEKQLP 899

Query: 862  VGAVRNSNSFHS-----------SPTPAWDVSS---AAIE--QPSSPLTFQGAIPNGSNS 905
               V +S +F S           S T A + SS   A +E  Q ++P+T    + +  N+
Sbjct: 900  -PEVYDSETFKSMQTQIEAFLNTSGTQAAEFSSSLPADLESDQKNAPVTNPLGVEDHVNA 958

Query: 906  LILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALP 965
              L++ +  G+    S  + S  E+T                   EQ E GVY+T +AL 
Sbjct: 959  AGLTDLTQNGE----SSVQDSKPEST-------------------EQFEPGVYVTFIALK 995

Query: 966  GGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 1001
             G K  KRVRFS++KF  +QAE+WW  N+ R+ ++Y
Sbjct: 996  NGTKIFKRVRFSKRKFGGQQAEEWWKENKERLLRKY 1031


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/1050 (43%), Positives = 628/1050 (59%), Gaps = 131/1050 (12%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +F R+  PEK+Y SFSLI+ +  RSLDL+CKD+ E EVWF+ L+ LIS S  +K      
Sbjct: 67   VFGRFLHPEKDYLSFSLIFKNGQRSLDLVCKDQAEVEVWFSALEGLIS-SFRKKSLINEH 125

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
             D VS                   F    +  +D         SY+S     LD A + +
Sbjct: 126  KDRVS-------------------FSEEVTYYQD-------RHSYDS----TLDIASNIS 155

Query: 124  VLYAAPPKVLLPSESACGSVNSLSSGGSD---GRTGHLKGLSGDTFRVSLSSAVSSSSQG 180
              +         S   CG+ NS S   SD    R   ++  + D+ RVS+SSA+SS SQG
Sbjct: 156  RSFN--------SAGYCGT-NSFSFRKSDVGFDRLNMIRTSAADSSRVSISSALSSYSQG 206

Query: 181  SGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
            SG DD +SLGDV++WGE   D     G H S S +  K+D  +PK +ES VVLDV  IAC
Sbjct: 207  SGTDDIESLGDVYVWGEVWTDVTPSDG-HTSSSCS--KVDVLIPKPLESDVVLDVNQIAC 263

Query: 241  GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
            G RH AL T+QGEVF+WGEE GGRLGHG D+D+S PKL+++L    V+L++CGE HTCAV
Sbjct: 264  GTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAV 323

Query: 301  TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            T SGD++ WG  + N GLLG G E+S WLPKK++GPLEG+ V SV+CG WH+A+ TS+G+
Sbjct: 324  TTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGK 383

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
            L+TFGDGTFGVLGHGDR +++ P+EV++L G +T++ ACG+WH+AA+VEV   + + +N 
Sbjct: 384  LYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVT--NQTGANV 441

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
             S KL+TWGDGD+ RLGHGDKE RLVP CV AL+E NF Q++CGH++TVAL T+G V+TM
Sbjct: 442  MSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALATSGRVFTM 501

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            GS   GQLG+PK++GK P  V+ +L    VEEI+CG  HV VLTSR+EVYTWG GANGRL
Sbjct: 502  GSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRL 561

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKR 600
            GHGD  DR  P LVEALKD+ VKSI CG++FT  IC+HKWVSG DQS+C+GCR  F F R
Sbjct: 562  GHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCTGCRQAFGFTR 621

Query: 601  KRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATET---SSSSHST 657
            KRH+CYNCGLV+CH CSS+K +KA++AP P KP+RVCD+CF KL KA ET   +S+  + 
Sbjct: 622  KRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKL-KAAETGSNNSNRRNA 680

Query: 658  VSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPL 717
            V+RR    +   E +E  E   SR+        ES+K  E  +++ + +           
Sbjct: 681  VTRRSIDGR---EKLERPEIRPSRT----TAPAESVKYTEVKAARNDMR----------- 722

Query: 718  PNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPP-----RATT 772
                SQ ++L   K  +         FSA  P +   +   SP     S P     +  +
Sbjct: 723  ---ASQISSLLQFKDLS---------FSALQPTAMSPAVTMSPAVPALSTPSPYTKKTKS 770

Query: 773  PTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEA 828
            P P +     PK  +D+ ++++E    E++KL++QV+ L +K + Q  +L+ + ++ K  
Sbjct: 771  PAPAIPQF--PKTDIDNLQKSNELLNQEMLKLQSQVDSLKQKCEAQHEQLQISDKKTKTV 828

Query: 829  LAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQ 888
            +++A EE  +C A  + +K L  +L  +   LP  A  +  +  +       V +   EQ
Sbjct: 829  VSMATEEYTRCSAVVEFVKFLDNELNGIVHELPSDAAESLKALQN------QVQALLREQ 882

Query: 889  PSSPLTFQGAIPNGSNSLILSNG----SDFGDNRSPS---------------------QT 923
             S P       P   + + LS+G     DF ++RS S                       
Sbjct: 883  RSHPSELLN--PMDHDGIQLSSGGNALHDFSNHRSGSTRYLFMSQDASSASGSAISLTSE 940

Query: 924  EASH--CEATTKNKNRTMKAEPAQGD-EWVEQDETGVYITLVALPGGLKDLKRVRFSRKK 980
              SH   E   K  N  +      G+ + +EQ E GVY+TL+ L  G K  KRVRFS+KK
Sbjct: 941  PPSHRGMEHHAKVPNDFVPKHDTHGEVQLIEQFEPGVYVTLIQLKDGSKVFKRVRFSKKK 1000

Query: 981  FSEKQAEQWWAANRARVYQQYNVSMVDKSS 1010
            F+E QAE+WW  N+ RV+++Y+   V +++
Sbjct: 1001 FAENQAEEWWRENQERVFKKYSHPTVPQTT 1030


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/1044 (44%), Positives = 628/1044 (60%), Gaps = 128/1044 (12%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALIS--RSHYRKGRAE 61
            +F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+ E EVWF+ L++LI+  R ++     +
Sbjct: 72   VFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQAEVEVWFSTLESLITSCRLNFLN---D 128

Query: 62   SRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALS 121
             ++D VS                   F    +  +D        TSY++     LD A S
Sbjct: 129  GQTDRVS-------------------FSEDVTIYQDS-------TSYDT----TLDIASS 158

Query: 122  -----DAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSS 176
                 ++  Y+ P            S+NS+ +     R   L+  +GD  RVS+SSA SS
Sbjct: 159  ITRSFNSAGYSTP-----------NSLNSIRADVGSDRVNMLRASTGDNSRVSISSAPSS 207

Query: 177  SSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQ 236
            SSQ SG DD +SLGDV++WGE   + +   G   S +Y   K D  +PK +ES VVLDVQ
Sbjct: 208  SSQSSGLDDIESLGDVYVWGEVWTEVLPSEG---SSNYLCSKTDFLIPKPLESDVVLDVQ 264

Query: 237  NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
             IACG RH  L T+QGEVF+WGEELGGRLGHG D+D+  PKL+++L   NVE +ACGE H
Sbjct: 265  QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFH 324

Query: 297  TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            TC VT SGD+Y WG  + N GLLGHG  +S WLPK+++GPLEG+ V SV+CG WH+A+  
Sbjct: 325  TCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALTM 384

Query: 357  SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            S+G+LFTFGDGTFG LGHGDR SV+ P+EV++L G R ++ ACGVWH+AA+VE+     +
Sbjct: 385  SSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEI--SGQA 442

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
            S+N  S KLFTWGDGD+ RLGHGDKEA+LVPTCV ALV+ NF QV+CGHS+TVAL T+GH
Sbjct: 443  STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGH 502

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            V+TMGS   GQLG+PKA+GK P  V+ KL    VEEI+CG  HVA LTSR+EVYTWG GA
Sbjct: 503  VFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGA 562

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 596
            NGRLGHG  +D+  P+LV+ALKD+ VKSI CG++FT  IC+HKWVSG DQS+CSGCR PF
Sbjct: 563  NGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCSGCRQPF 622

Query: 597  NFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATET---SSS 653
             F RKRHNCYNCGLV+CH CSS+K +KA++AP P KP+RVCD+CF KL KA +T   SS 
Sbjct: 623  GFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKL-KAADTGVISSY 681

Query: 654  SHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTR 713
            +   V  R S++    + +E  E  +  S +   +  E +K  E+    +N + E     
Sbjct: 682  NKRNVITRRSID--IKDKLERPE--IRPSRLATTSPAEPVKYQET----KNVRNETKPAD 733

Query: 714  GLPLPNGVSQGNALNNSK--SSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRAT 771
             + +    SQ  A+   K  +    FG+      +   G ++  +   P    S P +  
Sbjct: 734  PMSMMKA-SQVPAMLQFKDMAFAGTFGTVPTTVKSMTMGGQM--QMGMPMFSPSPPSKKP 790

Query: 772  TPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKE 827
            +P P  +     K+  D  K+T+E    ++ KL++QV +L +K + Q+ +L++  R+ K+
Sbjct: 791  SPPPATASPLIGKVDNDGLKKTNELLNQDISKLQSQVNKLKQKCETQDEQLQKAERKAKQ 850

Query: 828  ALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIE 887
            A ++A EE+A+     D +K L ++LK +A+ +P     N  +  S        S   + 
Sbjct: 851  AASMASEESARRNTVLDFVKHLDSELKVIADRVPGDVADNLKTLQSQ-------SERFLA 903

Query: 888  QPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPS---------------------QTEAS 926
              SS L     +           G D G +RS S                         S
Sbjct: 904  GQSSNLVEITGL----------TGHDIGHHRSSSTGSLPVSQDGSSGNASGSSIAMASDS 953

Query: 927  HCEATTKNKNRTMKA----EPAQGD----EWVEQDETGVYITLVALPGGLKDLKRVRFSR 978
             C    +N    +KA     P  G     + +EQ E GVY+TL+ L  G K  KRVRFS+
Sbjct: 954  PCHRIMEN---NLKAPGDFAPKYGTHGEVQLIEQFEPGVYVTLIQLRDGTKVFKRVRFSK 1010

Query: 979  KKFSEKQAEQWWAANRARVYQQYN 1002
            ++F+E+QAE+WW  N+ RV+++YN
Sbjct: 1011 RRFAEQQAEEWWRENQERVFKKYN 1034


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/904 (47%), Positives = 573/904 (63%), Gaps = 81/904 (8%)

Query: 157  HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAG 216
             +K +S    R+S+SSA+S+SS GSG +D +S GD+++WGE   D I   G  RS    G
Sbjct: 2    QVKSVSSSDIRISVSSALSTSSHGSGGEDSESFGDIYVWGEVICDTISRSGSDRSAYSPG 61

Query: 217  VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
               D  VPK +ES V+LDV  +ACG +HAALVT+Q EVF+WGEE  GRLGHG  ++V  P
Sbjct: 62   TTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNVFQP 121

Query: 277  KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
            +L+++L   NVEL+ACGE HTCAVT +GD+YTWG    N GLLGHG+ +S W+PK+++GP
Sbjct: 122  RLVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGP 181

Query: 337  LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
            L+G+ VS+VSCG WHTA++TS+GQL+TFGDGTFGVLGHG+R S S P+EV+SLKGLRT+ 
Sbjct: 182  LDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTIS 241

Query: 397  AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
             +CGVWHTAAVVEV++   S SN SSGKLFTWGDGD+ RLGHGD+ ++L PTC+ +L++ 
Sbjct: 242  VSCGVWHTAAVVEVII---SQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDY 298

Query: 457  NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
            NF + +CGH+LT+ LTT+GH++T+GS VYGQLG+P  +G+ P  VE +L    V E+ACG
Sbjct: 299  NFHKAACGHTLTIGLTTSGHIFTVGSSVYGQLGNPNNDGRYPRLVEEQLGGGGVVEVACG 358

Query: 517  DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
             YHVAVLT+  EVYTWGKGANGRLGHGD  DR  P+LVEAL+D+ VK + CG+SFTAAIC
Sbjct: 359  SYHVAVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSFTAAIC 418

Query: 577  LHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRV 636
             HKWVSG++QS CS CR PF F RKRHNCYNCGLV+CH+CSSKK+++A+++PNP KPYRV
Sbjct: 419  QHKWVSGMEQSQCSACRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRV 478

Query: 637  CDNCFGKLTKATETS-SSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKK 695
            CD+C+ KL+K  ++  S S +T+ R     +   E ++   N V+ S     +S + ++ 
Sbjct: 479  CDSCYVKLSKVLDSGVSYSRNTIPRIPGDTKA--ERIDTKANKVAPS-----SSSDMIRN 531

Query: 696  VESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMS 755
            ++  ++K+ KK +++                     S  P     K     S P  +  S
Sbjct: 532  LDVKAAKQTKKSDYS---------------------SQVPAMLQLKDIPFISAPDLQNSS 570

Query: 756  RATS--PTSRRSSPPRATTPTPTLSGLASPKIVV---DDAKRTSEEVIKLRAQVEELTRK 810
               +  P   RS+ P    P    S   S +      D  +   +EV KL+A+V  L ++
Sbjct: 571  TVANQFPYDSRSTLPFLRMPYLNYSSSLSSESSESLRDANELLKQEVQKLQAEVNSLRQE 630

Query: 811  SQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGA--VRN- 867
             + Q+ EL+++  +  EA+ +A EE +K + AKDVIK+LTAQLK+M+E LP GA  V+N 
Sbjct: 631  REQQDTELKKSEAKAHEAMNLATEEASKLKTAKDVIKALTAQLKEMSERLPPGACDVKNG 690

Query: 868  -------------------SNSFHSSPTPAWDVSS------AAIEQPSS-------PLTF 895
                                NS     T A   S+      A I Q S+       P   
Sbjct: 691  HLMGALASEMGRENQMRYDQNSIQYPQTHASVASARFGGLPAQIHQTSNYNETVMVPQES 750

Query: 896  QGAIPNGSNSL----ILSNGSDFGDNRSP---SQTEASHCEATTKNKNRTMKAEP-AQGD 947
            +G   NG          +NG   G    P    + E    +   +N N    + P  Q D
Sbjct: 751  RGEHLNGIREFSPVQQSANGGPIGYRYRPDDHDRREVDRFQINLQNLNMRSSSSPNNQVD 810

Query: 948  -EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMV 1006
             EW+EQ E GVY+TLV+L  G K+LKRVRFSR++F E QAE WW  NR +VY++YNV   
Sbjct: 811  AEWIEQYEPGVYLTLVSLCDGTKELKRVRFSRRRFGEHQAESWWNDNREKVYEKYNVCGT 870

Query: 1007 DKSS 1010
            D+ S
Sbjct: 871  DRLS 874


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
            [Zea mays]
          Length = 1054

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/1042 (43%), Positives = 618/1042 (59%), Gaps = 118/1042 (11%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+ E EVWF+ L+ALIS  H R    +  
Sbjct: 67   VFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQVEVEVWFSALEALISSCH-RNSSVDEH 125

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
             D VS                   F    S  +DG            P  + LD A S +
Sbjct: 126  KDRVS-------------------FSDDVSYYRDG-----------HPYDSTLDIASSIS 155

Query: 124  VLYAAPPKVLLPSESACGSVNSL--SSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGS 181
              +         ++   GS  S   S  GSD R   ++    D+ R+S+SSA SSSSQGS
Sbjct: 156  RSFNT-------ADYCRGSSFSFRRSDAGSD-RANMIRTSGADSTRLSISSAPSSSSQGS 207

Query: 182  GHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACG 241
            G DD +SLGDV++WGE   D     G H S S +  K+D  +PK +ES VVLDV  I CG
Sbjct: 208  GTDDIESLGDVYVWGEVWTDAAPSDG-HTSSSCS--KVDVLIPKPLESDVVLDVNQIVCG 264

Query: 242  GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
             RH AL T+QGEVF+WGEELGGRLGHG D+D+S PKL+++L    V+ ++CGE HTCA++
Sbjct: 265  SRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESLSVTIVDFISCGEFHTCAIS 324

Query: 302  LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
             SGD++ WG  +   GLLG+    S WLPK+++GPLEG+ V SV+CG WH+A++TS G+L
Sbjct: 325  ASGDLFNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEGLQVLSVACGSWHSALITSTGRL 384

Query: 362  FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            +TFGDG FG LGHG+R S + P+EV++L G RTV+ ACGVWH+AA+VE  V   +  N  
Sbjct: 385  YTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKVACGVWHSAAIVEASV--QTGMNVV 442

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            S KL+TWGDGD+ RLG GDKEARL+PTC+ AL+E NF Q+ CG ++TVAL T+GHVYTMG
Sbjct: 443  SKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFHQLGCGQNMTVALATSGHVYTMG 502

Query: 482  SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            S   GQLG+PK++GK P  V+ KL    VEEI+CG  HVAVLTSR+EVYTWG GANGRLG
Sbjct: 503  SSDNGQLGNPKSDGKHPCLVKDKLANELVEEISCGAAHVAVLTSRSEVYTWGLGANGRLG 562

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRK 601
            HGD +D+  P++VEALKD+ VKSI CG++FT  IC+H+WVSG DQS+C+GCR  F F RK
Sbjct: 563  HGDLNDKKTPTIVEALKDRHVKSISCGSNFTTCICIHRWVSGADQSVCTGCRQAFGFTRK 622

Query: 602  RHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRR 661
            RHNCYNCGLV+CH CSS+K +KA++AP P KP+RVCD+CF KL  A  +SS++    +RR
Sbjct: 623  RHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKLKNADTSSSNA----NRR 678

Query: 662  GSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGV 721
             +  +   ++ E  E  +    +    S E  K +E  +SK + K   +  +        
Sbjct: 679  NAATRRSTDSREKPE--IRPPRLVATPSAEPGKYMEVKASKSDMKPADSIMKA------- 729

Query: 722  SQGNALNNSKS--SNPVFGSTKKFFSASLPGSRIMSRAT--------SP-TSRRSSPPRA 770
            SQ +AL   K       FG  +      +P +  MS A         SP T +  SPP +
Sbjct: 730  SQASALLQFKDLGFGAQFGGLQPM---GMPPALAMSPAIPAFSLAPPSPYTKKMKSPPTS 786

Query: 771  TTPTPTLSGLASPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLK 826
              P        S K+ VD  +++    ++EV+KL++QVE+L +K + Q  +L+++ ++ K
Sbjct: 787  AIPQ-------SSKVDVDHLQKSNDLLNQEVLKLQSQVEDLKQKCEAQHEQLQKSDKKAK 839

Query: 827  EALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAI 886
               ++A EE++K  AA + +K L  +LK +A+ LPV    +  +            S   
Sbjct: 840  SVASMATEESSKRNAAVEFVKFLDNELKGIADKLPVDVADSLKALQMR------TQSLLR 893

Query: 887  EQPSSPLTFQGAIPN---------------------GSNSLILSNGSDFGDNRSPSQTEA 925
            EQ   PL     +                       G   L +S         + S T  
Sbjct: 894  EQSGHPLELVNPMERDHLHLSSGGSGRYDLVTHKSGGVGYLTMSQDGSSASGSAMSITSE 953

Query: 926  SHCEATTKNKNRTM-KAEPAQGD----EWVEQDETGVYITLVALPGGLKDLKRVRFSRKK 980
            S      +N ++      P QG     + +EQ E GVY+TL+ L  G K  KRVRFS+++
Sbjct: 954  SPSHRFMENSSKAHGDFAPKQGTHGEVQLIEQFEPGVYVTLIQLKDGTKVFKRVRFSKRR 1013

Query: 981  FSEKQAEQWWAANRARVYQQYN 1002
            F+E QAE+WW  N+ RV+++Y+
Sbjct: 1014 FAENQAEEWWRENQERVFKKYS 1035


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
            sativus]
          Length = 958

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/885 (46%), Positives = 569/885 (64%), Gaps = 60/885 (6%)

Query: 150  GSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIH 209
            GS+     L+   GD FR S+SS  S SS GSG DD +SLGDV++WGE   D +L  G  
Sbjct: 48   GSERANMQLRTSGGDGFRSSVSSTPSCSSGGSGPDDIESLGDVYVWGEIWTDLVLPDG-- 105

Query: 210  RSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV 269
             + S   VK D   PK +E+ VVLDVQ IACG RH ALVT+QGEVF+WGEE GGRLGHG+
Sbjct: 106  -TSSQIPVKNDVLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGI 164

Query: 270  DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
            D D S P L++ L   +V+ VACGE+HTCA+T S D+YTWG    N G+LGHG ++S W+
Sbjct: 165  DRDFSRPHLVEFLAVSHVDFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWI 224

Query: 330  PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
            PK++ G LEG+ V SV+CG WH+A+ TS G+L+TFGDGT+GVLGHGDR SV  PREV  L
Sbjct: 225  PKRVVGSLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL 284

Query: 390  KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
             GLRT++ ACGVWHTAA+VEVM  S + SN SS KLFTWGDGD+ RLGHG+KE  L+PTC
Sbjct: 285  SGLRTIKVACGVWHTAAIVEVM--SQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTC 342

Query: 450  VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF 509
            V++L++ NF Q++CGH++TVALTT+GHV+TMG   YGQLG+P ++G +P  V+ +L   F
Sbjct: 343  VSSLIDYNFHQLACGHNMTVALTTSGHVFTMGGTAYGQLGNPSSDGVIPCLVQDRLVGEF 402

Query: 510  VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
            VEEI+CG YH  VLTSR EV++WG+G+NGRLGHGD +DR  P+L+EALKD+ VKSI CG+
Sbjct: 403  VEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGS 462

Query: 570  SFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPN 629
            +FTA+IC+HKWVSG DQS+C+GCR  F F RKRHNCYNCGLV+CH+CSSKK++KA++AP 
Sbjct: 463  NFTASICIHKWVSGADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHSCSSKKALKAALAPT 522

Query: 630  PNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQ---GFNEAVEHGENFVSRSHVQF 686
            P KP+RVCD+C+ KL  A    + ++  V+R+ + N+    + E  + G+   SR  +  
Sbjct: 523  PGKPHRVCDSCYAKLKSA---EAGNNFCVNRKLTANRRSTDYKERFDRGDVRPSRILLSP 579

Query: 687  GTS---MESLKKVESGSS-------KRNKKQEFNRTRGLPLPNGVSQ-GNALNNSKSSNP 735
             T       +K V  GS        + ++     + + +  P+ +S   NAL  +  + P
Sbjct: 580  TTEPVKYHEIKSVRPGSRPTSPSMVRASQVPSLQQLKDIAFPSSLSAIQNALRPALVAPP 639

Query: 736  VFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE 795
                         P     SR  SP +RR SPPR+TTP  +       K V+D  K+++E
Sbjct: 640  S------------PPPMGNSRPASPYARRPSPPRSTTPVFS-------KSVIDSLKKSNE 680

Query: 796  EVI----KLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTA 851
             ++    KL+ +V+ L +K  +Q  E++   +   EA ++  EE++KC+ AK ++ ++T 
Sbjct: 681  TLVQDKSKLQREVKNLKQKCDIQGAEIQNLQKNATEAASLVEEESSKCKIAKKLVTTITE 740

Query: 852  QLKDMAEMLP--VGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQG-----AIPNG-- 902
            QLK+M + LP  +    N  S ++      ++   + +  S P + +      A+ NG  
Sbjct: 741  QLKEMKDKLPPEIWDGENFKSMYAQAEAFLNMVETS-KTSSLPTSHEKTNNLTALNNGST 799

Query: 903  -----SNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGV 957
                 S+  I  +GS   D    +       + T++N +R+  +      + +EQ E GV
Sbjct: 800  PSLDDSSKRIEDDGSGRKDLTQENVNSLLESKKTSENGSRSPLSSTEGEKQVIEQFEPGV 859

Query: 958  YITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
            Y TLV L  G K  KRVRFS+++F E+QAE WW+ N+ R+ ++YN
Sbjct: 860  YATLVVLSNGTKIFKRVRFSKRRFDEQQAEDWWSKNKDRLLKRYN 904


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/1051 (44%), Positives = 625/1051 (59%), Gaps = 107/1051 (10%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDL----ICKDKDEAEVWFTGLKALISRSHYRKGR 59
            +F+RY RPEK+Y SFSLIY   +RSLDL    ICKD  E EVW +GLKALIS    R  R
Sbjct: 71   VFRRYLRPEKDYLSFSLIYKKGERSLDLVRENICKDTAEVEVWLSGLKALISTGQLRNRR 130

Query: 60   AESR-SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDK 118
              S  +D+ + +           SP   PF  GG+ +     P     S+E+ P+     
Sbjct: 131  TRSELTDDSNDI-----------SPNDRPF--GGALEFTASIP-KGRFSFEAVPRESTSN 176

Query: 119  ALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSS 178
              SDA                         G        ++   GD  RVS+SS   +SS
Sbjct: 177  RRSDA-------------------------GSEHTSMAPVRTSVGDGSRVSVSSTNYASS 211

Query: 179  QGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNI 238
              SG DD +SLGDVFIWGE   +G    G+   GS    K+D  +PK +ES VVLDV  I
Sbjct: 212  VVSGPDDIESLGDVFIWGEVWAEGNSSDGL---GSQVPSKIDMLIPKPLESDVVLDVNYI 268

Query: 239  ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
              G  H ALVT+QGE+F+WGE+ GGRLGHG D D   P+L+D+L   +V  VACGE+HTC
Sbjct: 269  EPGVSHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSVSFVACGEYHTC 328

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            AV++SGD+YTWG    N G+LGHG ++S  +PK++ GPLEG  V S++CG WHTA++TS 
Sbjct: 329  AVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSN 388

Query: 359  GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM-VGSSSS 417
            G+LFTFGDGT GVLGHGDR SV+ P+E+  L G + V+ ACGVWHTAA++EV     SSS
Sbjct: 389  GKLFTFGDGTLGVLGHGDRESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSS 448

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
            +  SS KLFTWGDGD+ RLGH +KE  L PTCVAAL + NF QV+CGHSLTVALT +GHV
Sbjct: 449  NTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHSLTVALTASGHV 508

Query: 478  YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
            +TMGS  YGQLG+P ++GK+P  V  KL    VEEI+CG +HVAVLTSR+E+YTWG+GAN
Sbjct: 509  FTMGSKAYGQLGNPTSDGKVPILVRDKLQGETVEEISCGTHHVAVLTSRSELYTWGRGAN 568

Query: 538  GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFN 597
            GRLGHGD +D+  P LVEALK++ VK+I CG +FT  IC+HKWVSG DQS+CSGCR PF 
Sbjct: 569  GRLGHGDIEDQKTPILVEALKERHVKNIACGANFTTCICIHKWVSGNDQSVCSGCRQPFG 628

Query: 598  FKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSH-- 655
            F RKRHNCY+CGLVYCH CSSKK++KA++AP P+KP+RVCD C+ KL K  E S++SH  
Sbjct: 629  FTRKRHNCYHCGLVYCHPCSSKKALKAALAPTPSKPHRVCDACYAKL-KGCENSNASHFN 687

Query: 656  STVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSM-ESLKKVESGSSKRNKKQEFNRTRG 714
              ++R  S   G  E  E  E   S+  +   T + +SL      SS             
Sbjct: 688  KEITRPSSSVYG-REKTERVEVRPSKFLLSSATCLVKSLGSTHESSSMAGD--------A 738

Query: 715  LPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRR-SSPPRATTP 773
            L L + +  G +    K+S  +     +   A  P     SR  SP SRR  SP R+ +P
Sbjct: 739  LQLKDIIFPGPSSATQKASRALIMQQSQ---APTPPPSANSRPASPYSRRPPSPTRSVSP 795

Query: 774  TPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEAL 829
              + S       ++D  K+ +E    EV KL+  +  L +K  +Q+I++    + ++EA 
Sbjct: 796  GFSRS-------LIDSLKKKNEHLNQEVSKLQNHIRSLKQKGDMQDIKIRELQKNIEEAN 848

Query: 830  AVAGEETAKCRAAKDVIKSLTAQLKDMAEMLP----------------VGAVRNSNSFHS 873
             +AGEE++K R AK+ IKS+T +L ++ E LP                   ++ +  F S
Sbjct: 849  LLAGEESSKHREAKEFIKSITEELSEVTEKLPPEIPGSETLKVIHAQAQNLLKENLEFES 908

Query: 874  SPTPAWDVSSA------AIEQPSSPLTFQGAIPNGSNSLIL--SNGSDFGDNRSPSQTEA 925
            S  P+++          A +  SS L  Q    N   S ++  +NG+D     S S   +
Sbjct: 909  SFQPSFESEQQRAPDIPASDGDSSNLQEQRLEGNNEVSEVVRSTNGADDRQESSSSSYLS 968

Query: 926  SHCEATTKNKNRTMKAE---PAQGDEW--VEQDETGVYITLVALPGGLKDLKRVRFSRKK 980
            ++  +   ++N     E   P +  E   +EQ E GVYIT + +  G K  KRVRFSR++
Sbjct: 969  TNAVSPPNSENSIRSQESSRPVREGETSVIEQFERGVYITAIVIADGSKIFKRVRFSRRR 1028

Query: 981  FSEKQAEQWWAANRARVYQQYNVSMVDKSSV 1011
            FSE+QAE+WW+ N+ RVY++YN   ++  S+
Sbjct: 1029 FSEQQAEEWWSNNKDRVYRRYNPPPINNESI 1059


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
            Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
            Japonica Group]
          Length = 1064

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/1056 (43%), Positives = 628/1056 (59%), Gaps = 140/1056 (13%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALIS--RSHYRKGRAE 61
            +F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+ E EVWF+ L++LI+  R ++     +
Sbjct: 86   VFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQAEVEVWFSTLESLITSCRLNFLN---D 142

Query: 62   SRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALS 121
             ++D VS                   F    +  +D        TSY++     LD A S
Sbjct: 143  GQTDRVS-------------------FSEDVTIYQDS-------TSYDT----TLDIASS 172

Query: 122  -----DAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSS 176
                 ++  Y+ P            S+NS+ +     R   L+  +GD  RVS+SSA SS
Sbjct: 173  ITRSFNSAGYSTP-----------NSLNSIRADVGSDRVNMLRASTGDNSRVSISSAPSS 221

Query: 177  SSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQ 236
            SSQ SG DD +SLGDV++WGE   + +   G   S +Y   K D  +PK +ES VVLDVQ
Sbjct: 222  SSQSSGLDDIESLGDVYVWGEVWTEVLPSEG---SSNYLCSKTDFLIPKPLESDVVLDVQ 278

Query: 237  NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
             IACG RH  L T+QGEVF+WGEELGGRLGHG D+D+  PKL+++L   NVE +ACGE H
Sbjct: 279  QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFH 338

Query: 297  TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            TC VT SGD+Y WG  + N GLLGHG  +S WLPK+++GPLEG+ V SV+CG WH+A+  
Sbjct: 339  TCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALTM 398

Query: 357  SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            S+G+LFTFGDGTFG LGHGDR SV+ P+EV++L G R ++ ACGVWH+AA+VE+     +
Sbjct: 399  SSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEI--SGQA 456

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
            S+N  S KLFTWGDGD+ RLGHGDKEA+LVPTCV ALV+ NF QV+CGHS+TVAL T+GH
Sbjct: 457  STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGH 516

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            V+TMGS   GQLG+PKA+GK P  V+ KL    VEEI+CG  HVA LTSR+EVYTWG GA
Sbjct: 517  VFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGA 576

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 596
            NGRLGHG  +D+  P+LV+ALKD+ VKSI CG++FT  IC+HKWVSG DQS+CSGCR PF
Sbjct: 577  NGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCSGCRQPF 636

Query: 597  NFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATET---SSS 653
             F RKRHNCYNCGLV+CH CSS+K +KA++AP P KP+RVCD+CF KL KA +T   SS 
Sbjct: 637  GFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKL-KAADTGVISSY 695

Query: 654  SHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTR 713
            +   V  R S++    + +E  E  +  S +   +  E +K  E+    +N + E     
Sbjct: 696  NKRNVITRRSID--IKDKLERPE--IRPSRLATTSPAEPVKYQET----KNVRNETKPAD 747

Query: 714  GLPLPNGVSQGNALNNSK--SSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRAT 771
             + +    SQ  A+   K  +    FG+      +   G ++  +   P    S P +  
Sbjct: 748  PMSMMKA-SQVPAMLQFKDMAFAGTFGTVPTTVKSMTMGGQM--QMGMPMFSPSPPSKKP 804

Query: 772  TPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKE 827
            +P P  +     K+  D  K+T+E    ++ KL++QV +L +K + Q+ +L++  R+ K+
Sbjct: 805  SPPPATASPLIGKVDNDGLKKTNELLNQDISKLQSQVNKLKQKCETQDEQLQKAERKAKQ 864

Query: 828  ALAVAGEETAKCRAAKDVIKSLTA------------QLKDMAEMLPVGAVRNSNSFHSSP 875
            A ++A EE+A+     D +K L +            QLK +A+ +P     N  +  S  
Sbjct: 865  AASMASEESARRNTVLDFVKHLDSEDILMISQPSILQLKVIADRVPGDVADNLKTLQSQ- 923

Query: 876  TPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPS-------------- 921
                  S   +   SS L     +           G D G +RS S              
Sbjct: 924  ------SERFLAGQSSNLVEITGL----------TGHDIGHHRSSSTGSLPVSQDGSSGN 967

Query: 922  -------QTEASHCEATTKNKNRTMKA----EPAQGD----EWVEQDETGVYITLVALPG 966
                       S C    +N    +KA     P  G     + +EQ E GVY+TL+ L  
Sbjct: 968  ASGSSIAMASDSPCHRIMEN---NLKAPGDFAPKYGTHGEVQLIEQFEPGVYVTLIQLRD 1024

Query: 967  GLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
            G K  KRVRFS+++F+E+QAE+WW  N+ RV+++YN
Sbjct: 1025 GTKVFKRVRFSKRRFAEQQAEEWWRENQERVFKKYN 1060


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  752 bits (1942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/884 (47%), Positives = 563/884 (63%), Gaps = 85/884 (9%)

Query: 157 HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAG 216
           + KG   D  R S+SSA S+SS GS  DD DSLGDV++WGE   D        R+ S   
Sbjct: 2   YTKGPPLDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSA-----RTSSDTV 56

Query: 217 V----KMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
           +    K D  +PK +ES +VLDV ++ CG RHA+LVT+ GEVF+WGE+ GGRLGHG   D
Sbjct: 57  IRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED 116

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
             HP+L+++L   N++ VACGE HTCAVT +G++YTWG    N GLLGHG ++  W+P++
Sbjct: 117 SVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRR 176

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 392
           ++GPLEG+ ++ VSCG WHTA++TS GQLFTFGDG+FGVLGHGD  S+S PREV+SL GL
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGL 236

Query: 393 RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA 452
           +T+  ACGVWHTAA+VEV+V + SS+  S+GKLFTWGDGD+ RLGHGDKEARL PTCVA+
Sbjct: 237 KTIAVACGVWHTAAIVEVIV-TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVAS 295

Query: 453 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE 512
           L++ +F +V+CGHSLTV LTT+G V+TMG+ VYGQLG+  ++G+ P  VE K+    V +
Sbjct: 296 LIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-PCLVEDKIASEHVLQ 354

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           IACG YHVAVLTSR+EV+TWGKGANGRLGHGD +DR  P+ VEAL+D+ V+ I CG +FT
Sbjct: 355 IACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFT 414

Query: 573 AAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNK 632
           AAICLHKWVSG DQS CS CR PF F RKRHNCYNCGLV+C+ C+S+K+++A++AP+P K
Sbjct: 415 AAICLHKWVSGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGK 474

Query: 633 PYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMES 692
            +RVCD+C+ KL  A   SSS++      G  N         GE  V +S     ++M+ 
Sbjct: 475 LHRVCDSCYSKLKNA---SSSANKKDLAPGESN---------GEARVGKS--ILSSNMDM 520

Query: 693 LKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSR 752
           ++ ++S ++K+ KK +       P  + + Q   +  S  ++    +  +        S 
Sbjct: 521 IRSLDSKAAKQGKKTDALSFLRNPQVSSLLQLRDIAFSGGADLNRPAAPRAARTPAARSV 580

Query: 753 IMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELT 808
             SRA SP SRRSSPPR+TTP PT  GL+  K   D+  + +E    EV +LRAQV+ L 
Sbjct: 581 TSSRAVSPFSRRSSPPRSTTPVPTTHGLSLSKSATDNLVKANELLSQEVERLRAQVDSLR 640

Query: 809 RKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPV--GA-- 864
            +    E+EL ++ ++++EA+ +  EE+AK +AAK+VIKSLTAQLKDMAE LP   GA  
Sbjct: 641 NRCDHHELELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLKDMAERLPPEHGAYD 700

Query: 865 --------VRNSNSFHSSPTPAWD--VSSAAIEQPSSPLTFQGAIPNGSNSL-----ILS 909
                   V N    H +   + +  V  A  E  ++P T  G  P+ +  +     +L 
Sbjct: 701 FNEAKQVHVPNGVEPHVATYSSMNGKVHQARNELLNAPSTNSGRSPHSNGGISNQHKLLG 760

Query: 910 N------------------GSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQ-GD--- 947
           N                  GSD    R+ S ++     ++  + N ++ A   Q GD   
Sbjct: 761 NISENSEGSTHSLRITSPHGSDRPHRRAHSNSDEMLSASSRGDDNVSIDARSLQNGDDSY 820

Query: 948 ---------------EWVEQDETGVYITLVALPGGLKDLKRVRF 976
                          EW+EQ E GVYITL  L  G +DLKRVRF
Sbjct: 821 KPRGTISISSNQVQAEWIEQYEPGVYITLTTLRDGTRDLKRVRF 864


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/1045 (42%), Positives = 620/1045 (59%), Gaps = 123/1045 (11%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+ E EVWF+ L+ LI+  H R    +  
Sbjct: 67   VFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQVEVEVWFSALEGLINSCH-RNSSVDEH 125

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
             D VS                   F    S  +D         SY+S             
Sbjct: 126  KDRVS-------------------FSDDASYYQDS-------HSYDS------------T 147

Query: 124  VLYAAPPKVLLPSESACGSVN---SLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQG 180
            V  A+       +   CG  +     S  GSD R   ++    D+ R+S+SSA  SSS  
Sbjct: 148  VDIASSISRSFNTAGYCGGSSFSFRRSDAGSD-RANMIRTSGADSTRLSISSAAPSSSSQ 206

Query: 181  SGH-DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIA 239
                DD +SLGDV++WGE   D     G H + S +  K+D  +PK +ES VVLDV  I 
Sbjct: 207  GSGTDDIESLGDVYVWGEVWTDAAPSDG-HTTSSCS--KVDVLIPKPLESDVVLDVNQIV 263

Query: 240  CGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA 299
            CG RH AL T+QGEVF+WGEELGGRLGHG D+D+S PKL++++    V+ ++CGE HTCA
Sbjct: 264  CGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDFISCGEFHTCA 323

Query: 300  VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
            ++ SGD++ WG  + + GLLG+    S WLPK+++GPLEG+ V  V+CG WH+A++TS G
Sbjct: 324  ISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVACGSWHSALITSTG 383

Query: 360  QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            +L+TFGDGTFG LGHG+R S + P+EV++L G RT++ ACGVWH+AA+VE  V   +  N
Sbjct: 384  RLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVACGVWHSAAIVEATV--QTGMN 441

Query: 420  CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
              S KL+TWGDGD+ RLG GDKEARL+PTCV AL+E NF Q++CG ++TVAL T+GHVYT
Sbjct: 442  MVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFHQLACGQNMTVALATSGHVYT 501

Query: 480  MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            MGS   GQLG+PK++GK P  V+ KL    VEEI+CG  HVAVLTSR+EVYTWG GANGR
Sbjct: 502  MGSSDNGQLGNPKSDGKQPCLVKDKLAHELVEEISCGAAHVAVLTSRSEVYTWGMGANGR 561

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFK 599
            LGHGD +D+  P++VEALKD+ VKSI CG++FT  IC+HKWVSG DQS+C+GCR  F F 
Sbjct: 562  LGHGDLNDKKAPTIVEALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCTGCRQAFGFT 621

Query: 600  RKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVS 659
            RKRHNCYNCGLV+CH CSS+K +KA++AP P KP+RVCD+CF KL  A  T+S++    +
Sbjct: 622  RKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKLKNADTTTSNA----N 677

Query: 660  RRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPN 719
            RR +  +   ++ E  E  +    +    S E +K +E   +K + K   +  +      
Sbjct: 678  RRNAATRRSIDSREKPE--IRPPRLVATPSAEPVKYMEVKVAKNDMKSADSIMKA----- 730

Query: 720  GVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIM----SRATSPT--SRRSSPPRATT- 772
              SQ +AL   K            F+A   G + M    S A SP   S   +PP A T 
Sbjct: 731  --SQASALLQFKDLG---------FAAQFGGLQPMGMSPSVAISPAIPSFSVAPPSAYTK 779

Query: 773  --PTPTLSGL-ASPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQL 825
               +P  S +  S K+ VD  +++    ++E+++L++QVE+L +K + Q  +L+++ ++ 
Sbjct: 780  KAKSPPASAIPQSCKVDVDHLQKSNDLLNQELLRLQSQVEDLKQKCEAQHEQLQKSDKKA 839

Query: 826  KEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAA 885
            K   ++A EE++K  AA + +K L  +LK + + LPV A  +  +            S  
Sbjct: 840  KSVASMATEESSKRNAAVEFVKFLDHELKGIVDKLPVDAADSMKALQ------MKTQSLL 893

Query: 886  IEQPSSPLTFQGAIPNGSNSLILSNGS----DFGDNRS------------PSQTEASHCE 929
             EQ   P       P   + L LS+G     D   ++S             S + ++   
Sbjct: 894  REQSGHPSELMN--PMERDHLHLSSGGSGRYDLVTHKSGGVGYLTMSQDGSSASGSAISI 951

Query: 930  ATTKNKNRTMK-AEPAQGD-----------EWVEQDETGVYITLVALPGGLKDLKRVRFS 977
             +    +R M+ +  A GD           + +EQ E GVY+TL+ L  G K  KRVRFS
Sbjct: 952  TSESPSHRFMENSAKAHGDFAPKHGTHGEVQLIEQFEPGVYVTLIQLKDGTKVFKRVRFS 1011

Query: 978  RKKFSEKQAEQWWAANRARVYQQYN 1002
            +++F+E QAE+WW  N+ RV+++Y+
Sbjct: 1012 KRRFAENQAEEWWRENQERVFKKYS 1036


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  746 bits (1925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/717 (52%), Positives = 507/717 (70%), Gaps = 31/717 (4%)

Query: 157 HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGE--CTGDGILGGG-IHRSGS 213
           H +G S D  R S+SSA S+SS GS  DD DSLGDV++WGE  C     +G   I RS  
Sbjct: 2   HTRGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSVRVGSDTIIRSTE 61

Query: 214 YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
               K D  +PK +ES +VLDV ++ CG RHAALVT+ G+VF+WGE+ GGRLGHG   D 
Sbjct: 62  ----KTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            HP+L+++L   NV+ VACGE HTCAVT +G++YTWG    N GLLGHG +   W+PK++
Sbjct: 118 VHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRI 177

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 393
           +G L+G+ V+ VSCG WHTA++TS GQLFTFGDG+FGVLGHG+  S+S P+EV+SL GL+
Sbjct: 178 SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLK 237

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
           T+  ACGVWHTAA+VEV+V  SSSS  S+GKLFTWGDGD+ RLGHGDKE+RL PTCVA+L
Sbjct: 238 TIAVACGVWHTAAIVEVIVTHSSSS-VSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASL 296

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
           ++ +F +V+CGHSLTV LTT+G V +MG+ VYGQLG+P ++G+LP  VE ++    V ++
Sbjct: 297 IDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQV 356

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           ACG YHVAVLT R+EV+TWGKGANGRLGHGD +DR  P+ VEALKD+ V+ I CG +FTA
Sbjct: 357 ACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTA 416

Query: 574 AICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKP 633
           AICLHKWVSG DQS CS C+ PF F RKRHNCYNCGLV+C+ C+S+K+++A++APNP KP
Sbjct: 417 AICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKP 476

Query: 634 YRVCDNCFGKLTKATETSS--SSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSME 691
           YRVCD+CF KL  A ++ S       VS     + G  +A          S     ++M+
Sbjct: 477 YRVCDSCFLKLKNALDSDSFNKRKDIVSHLAGESNGDTKA----------SKTILSSNMD 526

Query: 692 SLKKVESGSSKRNKKQE---FNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASL 748
            ++ ++S ++++ KK +   F RT   P  + + Q   +  S S++ +  S  +    S 
Sbjct: 527 IIRSLDSKAARQGKKTDALSFLRT---PQVSSLLQLRDIALSGSAD-MNRSVPRAVRTSA 582

Query: 749 PGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQV 804
             S   SRA SP SR+SSPPR+TTP PT  GL+  K   D+  +T+E    E+ +L AQV
Sbjct: 583 VRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQV 642

Query: 805 EELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLP 861
           + L  + + QE+EL ++ ++++EA+ +  EE+AK +AAK+VIKSLTAQLKDMAE +P
Sbjct: 643 DNLRHRCEHQEVELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLKDMAERIP 699


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
            distachyon]
          Length = 913

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/936 (46%), Positives = 585/936 (62%), Gaps = 116/936 (12%)

Query: 143  VNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDG 202
            +NS+ S GSD      KG+S D  RVS SSA S+SS GS  DD DS GDV++WGE   + 
Sbjct: 3    INSIVSWGSDATDMPTKGVSSDVIRVSTSSAPSTSSHGSAQDDCDSSGDVYVWGEVICEN 62

Query: 203  ILGGGIHRSGSYA----GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 258
             +     R+GS A     V+ D  +PK +ES +VLDV ++ CG +HAALVTK GEVF+WG
Sbjct: 63   SV-----RAGSDAVIRSTVRHDVLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWG 117

Query: 259  EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGL 318
            EE GGRLGHG   D  HP L+++L   NV+ VACGE HTCAVT +G++YTWG    N GL
Sbjct: 118  EESGGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGL 177

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
            LGHG ++S W+PK+++G LEG  V+ VSCG WHTA++TS GQLFTFGDGTFGVLGHG+R 
Sbjct: 178  LGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRE 237

Query: 379  SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH 438
            S+  PREV+SL GL+T+  ACGVWHTAAVVEV+V + SSS+ SSGKLFTWGDGD+ RLGH
Sbjct: 238  SIPCPREVESLSGLKTIAVACGVWHTAAVVEVIV-TQSSSSISSGKLFTWGDGDKHRLGH 296

Query: 439  GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLP 498
            GDKE R+ PTCVA+L++ +F +++CGHSLTV LTT+G V+ MG+ VYGQLG+P+++GKLP
Sbjct: 297  GDKEPRVKPTCVASLIDYDFHRIACGHSLTVGLTTSGQVWGMGNTVYGQLGNPRSDGKLP 356

Query: 499  TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
              VE  + +N V+ +ACG YHVAVLT ++EV+TWGKGANGRLGHGD +DR  P+LVE L+
Sbjct: 357  CLVEDIMGENVVQ-VACGSYHVAVLTVKSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLR 415

Query: 559  DKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSS 618
            D+ V+ I CG +FTAAIC  KW+SG +QS C+ CR PF F RKRHNC+NCG V+C+ C+S
Sbjct: 416  DRGVRHIACGANFTAAICQRKWMSGAEQSQCASCRQPFGFTRKRHNCHNCGHVHCNACTS 475

Query: 619  KKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAV--EHGE 676
            +K ++A++APNP KPYRVCD+CF KL  A ++S+     V++R        EAV    GE
Sbjct: 476  RKVLRAALAPNPAKPYRVCDSCFLKLNNAIDSSA-----VNKR-------KEAVPRHSGE 523

Query: 677  NFVSRSHVQ--FGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSN 734
            +       +    ++++ ++ ++S ++K+ KK +                 AL  S   N
Sbjct: 524  SNTDAKLAKAIIPSNLDMIRSLDSKAAKQGKKTD-----------------AL--SFLRN 564

Query: 735  PVFGSTKKFFSASLPGSRIMSRAT-----SPTSRRSSPPRATTPTPTLSGLASPKIVVDD 789
            P   S  +    +L G   ++R       +P  R  SPPR+TTPT    GL+  K   D+
Sbjct: 565  PQMNSLLQLRDIALSGGFDLNRPVQKTVRTPAVRSPSPPRSTTPT---HGLSIAKSATDN 621

Query: 790  AKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDV 845
              + +E    EV +LR QV+ L  + +LQ++EL+++ ++++EA+ +  EE+ K +AAK+V
Sbjct: 622  LTKKNEMLNQEVERLRGQVDNLRHRCELQDLELQKSAKKVQEAMTLVAEESGKSKAAKEV 681

Query: 846  IKSLTAQLKDMAEML-PVGAVRNSNSFHSSPTP-------AWDVSSAAIEQPSSPLTFQG 897
            IKSLTAQLKDMAE L P     + N    S  P       +   S   I QP +      
Sbjct: 682  IKSLTAQLKDMAERLPPDPGAYDGNDAKQSQFPNGIESHGSIYSSMNGIHQPRNESIHAL 741

Query: 898  AIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATT-----------KNKNR--------T 938
             +P+ ++   L +    G ++SP    + + E +            ++ NR         
Sbjct: 742  NMPSLNSGRALHSNGISGQHKSPGNNISENNEVSAHRHRVSSPHDAEHSNRRGHDSGDEL 801

Query: 939  MKAEPAQGD-------------------------------EWVEQDETGVYITLVALPGG 967
              A    GD                               EW+EQ E GVYITL+ L  G
Sbjct: 802  FTASRRAGDSASMDTMSLQNGEDGYKSRGTVSLSGNQVQAEWIEQYEPGVYITLMTLIDG 861

Query: 968  LKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
             +DLKRVRFSR++FSE QAE WW  N  +VY++Y+V
Sbjct: 862  TRDLKRVRFSRRRFSEHQAENWWNENHEKVYERYDV 897


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
            distachyon]
          Length = 1068

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/922 (45%), Positives = 573/922 (62%), Gaps = 101/922 (10%)

Query: 151  SDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHR 210
            +D     +K  S    RVS+SSA+S+SS GSG +D +S GDV++WGE   D     G   
Sbjct: 181  TDASEMQVKSASSSDIRVSVSSALSTSSHGSG-EDSESFGDVYVWGEVMCDTTSRSGSDG 239

Query: 211  SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            +    G   D  VPK +ES V+LDV  +ACG +HAAL+T+Q EVF+WGEE  GRLGHG  
Sbjct: 240  NVHGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGHGAG 299

Query: 271  SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP 330
            + +  P+L+++L   NVE++ACGE HTCAVT +GD+YTWG    N GLLGHG+ +S W+P
Sbjct: 300  TSIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIP 359

Query: 331  KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK 390
            K+++GPLEG+ VS+VSCG WHTA++TS+GQL+TFGDGTFG LGHG+R ++S P+EV+SLK
Sbjct: 360  KRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESLK 419

Query: 391  GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
            GLRT+  +CGVWH+AAVVEV++   + SN SSGKLFTWGDGD+ RLGHGD+ A+L PTCV
Sbjct: 420  GLRTISVSCGVWHSAAVVEVIM---TQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCV 476

Query: 451  AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFV 510
             +L++ NF + +CGH+LT+ LTT+GH++T+GS VYGQLG+P  +G+ P  VE K+    V
Sbjct: 477  PSLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLGNPNNDGRYPRLVEDKVGGGGV 536

Query: 511  EEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
             E+ACG YHVAVLT+  EVYTWGKGANGRLGHGD  DR  P+LVEAL+D+ VK I CG+S
Sbjct: 537  VEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRIACGSS 596

Query: 571  FTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNP 630
            FTAAI  HKWVSGV+QS CS CR PF F RKRHNCYNCGLV+CH+CSSKK+++A+++PNP
Sbjct: 597  FTAAISQHKWVSGVEQSQCSACRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNP 656

Query: 631  NKPYRVCDNCFGKLTKATETS-SSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTS 689
             KPYRVCD+C+ KL+K  ++  S S +T+ R        +   E  +   +R  V   TS
Sbjct: 657  GKPYRVCDSCYMKLSKVLDSGVSYSRNTIPRIPG-----DTKAERMDTKATR--VASATS 709

Query: 690  MESLKKVESGSSKRNKKQE-------FNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKK 742
             + +K ++  ++K+ KK +         + + +P    V  G+ LNN+            
Sbjct: 710  SDMIKNLDVKAAKQTKKSDHAPQFPAILQLKDIPF---VGPGD-LNNT------------ 753

Query: 743  FFSASLPGSRIMSRATSPTSRRSSPPRATTP---TPTLSGLASPKIVVDDAKRTSEEVIK 799
                   GS + +  ++ T  R +P     P   + +     S +   +  +   +EV K
Sbjct: 754  -------GSTVSNGYSNDT--RYAPQILRMPHLNSSSSLSSESIESFREANELLKQEVQK 804

Query: 800  LRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEM 859
            LRA+V  L ++ + Q+ EL+++  +  EA+ +A EE +K +AAK+VIKSLTAQ+K+MAE 
Sbjct: 805  LRAEVSSLRQEREQQDNELQKSEAKAHEAVTLAAEEVSKSKAAKEVIKSLTAQVKEMAER 864

Query: 860  LP----------------------VGAVRNSNSF-----HSSPTPAWDVSSAAIEQPSSP 892
            LP                      +G   +   +     H S TP +  S+     P  P
Sbjct: 865  LPPGEHDMKPPRVVYLPGGVVSPEIGGRESQKRYQPGGIHYSQTPTYVASARVNGLP--P 922

Query: 893  LTFQGAIPNGSNSLI--------LSNGSDF----------GDNRSPSQT----EASHCEA 930
               Q + P G N+++         +   DF          G  R  S+     E    + 
Sbjct: 923  QVHQTSNP-GDNAMVPHESMFENFNKSKDFPAAAAQQRTNGGYRPRSEDFDRRETERFQI 981

Query: 931  TTKNKNRTMKAEPAQG--DEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQ 988
              +  N      P+     EW+EQ E GVY+TLV+L  G K+LKRVRFSR++F E QAE 
Sbjct: 982  NLQGWNTRGSGSPSNQVEAEWIEQYEPGVYLTLVSLHDGTKELKRVRFSRRRFGEHQAES 1041

Query: 989  WWAANRARVYQQYNVSMVDKSS 1010
            WW+ N  +VY +YNV   D+ S
Sbjct: 1042 WWSENHEKVYDKYNVRRTDRIS 1063



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 2/48 (4%)

Query: 6   IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALIS 51
           +FQR+  PEK++ SFSLIYND  RSLDLICKDK E +VWFT L ALIS
Sbjct: 70  VFQRFLLPEKDHLSFSLIYNDGKRSLDLICKDKVETQVWFTCLNALIS 117


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/716 (53%), Positives = 510/716 (71%), Gaps = 31/716 (4%)

Query: 157 HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAG 216
           H KG S D  RVS SSA S+SS GS  DD DS GDV++WGE   D  +  G        G
Sbjct: 2   HTKGASSDAIRVSTSSAPSTSSHGSAQDDYDSSGDVYVWGEVICDNTVRVGPDTVIRSTG 61

Query: 217 VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
            K D  +PK +ES +VLDV ++ CG +HAALVTK GEVF+WGEE GGRLGHG   D  HP
Sbjct: 62  -KADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHP 120

Query: 277 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
           +L+++L   NV++VACGE HTCAVT +G++YTWG    N GLLG+G ++S W+PK+++G 
Sbjct: 121 RLVESLAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGA 180

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
           LEG  V+ VSCG WHTA+VTS GQLFTFGDGTFGVLGHG+R S S PREV+SL GL+T+ 
Sbjct: 181 LEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIA 240

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
            ACGVWHTAAVVEV+V + SSS+ SSGKLFTWGDGD+ RLGHGDKE RL PTCVA+L++ 
Sbjct: 241 VACGVWHTAAVVEVIV-TQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
           +FC+++CGHSLTV LTT+G + +MG+ VYGQLG+P+++GKLP  VE  + ++ V ++ACG
Sbjct: 300 DFCRIACGHSLTVGLTTSGQILSMGNTVYGQLGNPRSDGKLPCLVEDIMGEHVV-QVACG 358

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
            YHVAVLT+++EV+TWGKGANGRLGHGD +DR  P+LVEAL+D+ V+ I CG++FT+AIC
Sbjct: 359 SYHVAVLTNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGVRHIACGSNFTSAIC 418

Query: 577 LHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRV 636
            HKWVSG +QS C+ CR PF F RKRHNC+NCGLV+C+ C+S K ++A++APNP KPYRV
Sbjct: 419 QHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSHKVLRAALAPNPAKPYRV 478

Query: 637 CDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKV 696
           CD+CF KL  A  +S+ +    +      +  N+A       ++R+ V   ++++ ++ +
Sbjct: 479 CDSCFMKLNSAAYSSAVNKKKEAVPRHSGESNNDAK------LARAIVP--SNLDMIRSL 530

Query: 697 ESGSSKRNKKQE---FNRTRG----LPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLP 749
           +S ++K+ KK +   F RT      L L +    G    N      V  S +   S    
Sbjct: 531 DSKAAKQGKKTDALSFLRTPQMSSLLQLKDIALSGGIDMNKSVPRAVRTSVRSLNS---- 586

Query: 750 GSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVE 805
                SRA SP SR+ SPPR+TTP PT  GL+  K   D   +T+E    EV +LRAQV+
Sbjct: 587 -----SRAVSPFSRKPSPPRSTTPVPTTHGLSIAKTAADSLAKTNEMLSQEVERLRAQVD 641

Query: 806 ELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLP 861
            L  + +LQE+EL+++ ++++EA+++  EE+AK +AAK+VIKSLTAQLKDMAE LP
Sbjct: 642 NLRHRCELQELELQKSAKKVQEAMSMVSEESAKSKAAKEVIKSLTAQLKDMAERLP 697



 Score = 47.0 bits (110), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 20/29 (68%), Positives = 22/29 (75%)

Query: 948 EWVEQDETGVYITLVALPGGLKDLKRVRF 976
           EW+EQ E GVYITL  L  G +DLKRVRF
Sbjct: 841 EWIEQYEPGVYITLTTLRDGTRDLKRVRF 869


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/724 (53%), Positives = 517/724 (71%), Gaps = 47/724 (6%)

Query: 157 HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGG---IHRSGS 213
           H KG S D  RVS SSA S+SS GS  DD DS GDV++WGE   D  +  G   + RS +
Sbjct: 2   HTKGASSDAIRVSTSSAPSTSSHGSAQDDYDSSGDVYVWGEVICDNTVRVGPDTVIRSTA 61

Query: 214 YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
               K D  +PK +ES +VLDV ++ CG +HAALVTK GEVF+WGEE GGRLGHG   D 
Sbjct: 62  ----KADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDS 117

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            HP+L+++L   NV++VACGE HTCAVT SG++YTWG    N GLLG+G ++S W+PK++
Sbjct: 118 VHPRLVESLAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRI 177

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 393
           +G LEG  V+ VSCG WHTA+VTS GQLFTFGDGTFGVLGHG+R S S PREV+SL GL+
Sbjct: 178 SGVLEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLK 237

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
           T+  ACGVWHTAAVVEV+V + SSS+ SSGKLFTWGDGD+ RLGHGDKE +L PTCVA+L
Sbjct: 238 TIAVACGVWHTAAVVEVIV-TQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASL 296

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
           ++ +FC+++CGHSLTV LTT+G V +MG+ VYGQLG+P+++GKLP  +E  + ++ V ++
Sbjct: 297 IDYDFCRIACGHSLTVGLTTSGQVLSMGNTVYGQLGNPRSDGKLPCLIEDIMGEHVV-QV 355

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           ACG YHVAVLT+++EV+TWGKGANGRLGHGD +DR  P+LVE+L+D+ V+ I CG++FT+
Sbjct: 356 ACGSYHVAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTS 415

Query: 574 AICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKP 633
           AIC HKWVSG +QS C+ CR PF F RKRHNC+NCGLV+C+ C+S K ++A++APNP KP
Sbjct: 416 AICQHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSHKVLRAALAPNPAKP 475

Query: 634 YRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESL 693
           YRVCD+CF KL  A  +     ST++++  +    +    H     +R+ V   ++++ +
Sbjct: 476 YRVCDSCFMKLNSAAYS-----STINKKKEVVPRHSGESNHDAKL-ARAIVP--SNLDMI 527

Query: 694 KKVESGSSKRNKKQE---FNRT---------RGLPLPNGVSQGNALNNSKSSNPVFGSTK 741
           + ++S ++K+ KK +   F RT         R + L  G+     LN S     V  S +
Sbjct: 528 RSLDSKAAKQGKKTDALSFLRTPQMSSLLQLRDITLSGGID----LNKS-VPRAVRTSVR 582

Query: 742 KFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EV 797
              S         SRA SP SR+ SPPR+TTP PT  GL+  K   D   +T+E    EV
Sbjct: 583 SLNS---------SRAVSPFSRKPSPPRSTTPVPTTHGLSIAKTAADSLAKTNEMLSQEV 633

Query: 798 IKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMA 857
            +LRAQV+ L R+ +LQE+EL+++ ++++EA+++  EE+AK +AAK+VIKSLT+QLKDMA
Sbjct: 634 ERLRAQVDNLRRRCELQELELQKSAKKVQEAMSMVSEESAKSKAAKEVIKSLTSQLKDMA 693

Query: 858 EMLP 861
           E LP
Sbjct: 694 ERLP 697



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 2/64 (3%)

Query: 948  EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVD 1007
            EW+EQ E GVYITL  L  G +DLKRVRFSR++F E QAE WW  NR +VY++YNV   D
Sbjct: 841  EWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAESWWNENRDKVYEKYNVD--D 898

Query: 1008 KSSV 1011
             SSV
Sbjct: 899  PSSV 902


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/721 (53%), Positives = 514/721 (71%), Gaps = 43/721 (5%)

Query: 157 HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGS--- 213
           H KG S D  RVS SSA S+SS GS  DD DS GDV++WGE   D  +     R+GS   
Sbjct: 2   HTKGASSDVIRVSTSSAPSTSSHGSAQDDCDSSGDVYVWGEVICDNSV-----RTGSDTV 56

Query: 214 -YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
             + V+ D   PK +ES +VLD  ++ CG +H+ALVTK GEVF+WGEE GGRLGHG   D
Sbjct: 57  VRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSRED 116

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
             HP+LI++L   NV++VACGE HTCAVT +G++YTWG    N GLLGHG ++S W+PK+
Sbjct: 117 SIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKR 176

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 392
           + G LEG+ V+ VSCG WHTA++T+ GQLFTFGDGTFGVLGHG+R S+S P+EV+SL GL
Sbjct: 177 IAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGL 236

Query: 393 RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA 452
           +T+  ACGVWHTAA+VEV+V + SSS+ SSGKLFTWGDGD+ RLGHGDKE RL PTCVA+
Sbjct: 237 KTISVACGVWHTAAIVEVIV-TQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVAS 295

Query: 453 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE 512
           L++ +F +++CGHSLTV LTT+G V +MG+ VYGQLG+P+++GK+P  VE  + +N V +
Sbjct: 296 LIDYDFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCLVEEIVGENVV-Q 354

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           +ACG YHVAVLT ++EV+TWGKGANGRLGHGD +DR  P+LVEAL+D+ V+ I CG +FT
Sbjct: 355 VACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFT 414

Query: 573 AAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNK 632
           AAIC HKWVSG +QS C+ CR PF F RKRHNC+NCGLV+C+ C+S+K+V+A++APNP K
Sbjct: 415 AAICQHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSRKAVRAALAPNPAK 474

Query: 633 PYRVCDNCFGKLTKATETS--SSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSM 690
           PYRVCD+CF KL  A ++S  S     V R  + +    +A+               +++
Sbjct: 475 PYRVCDSCFLKLNNAVDSSAISKKKENVLRESNSDGRLTKAI-------------IPSNL 521

Query: 691 ESLKKVESGSSKRNKKQE---FNRTRGLPLPNGVSQGN--ALNNSKSSN-PVFGSTKKFF 744
           + ++ ++S ++K+ KK +   F RT   P  N + Q    AL+     N PV  + +   
Sbjct: 522 DMIRSLDSKAAKQGKKTDALSFLRT---PQMNSLLQLRDIALSGGLDLNRPVPRAVRTTA 578

Query: 745 SASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKL 800
             S+      SRA SP SR+ SPPR+TTP PT  GL+  K   D+  +T+E    EV +L
Sbjct: 579 VRSVN----TSRAVSPFSRKPSPPRSTTPVPTTHGLSIGKGAADNLAKTNEMLNQEVERL 634

Query: 801 RAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEML 860
           RAQV+ L  + ++QE+EL+++ ++++EA+ +  EE++K +AAK+VIKSLTAQLKDMAE L
Sbjct: 635 RAQVDNLRHRCEVQELELQKSAKKVQEAMTLVAEESSKSKAAKEVIKSLTAQLKDMAERL 694

Query: 861 P 861
           P
Sbjct: 695 P 695



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 46/63 (73%)

Query: 948  EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVD 1007
            EW+EQ E GVYITL  L  G +DLKRVRFSR++F E QAE WW  NR +VY++YNV   +
Sbjct: 839  EWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAENWWNENREKVYERYNVRSSE 898

Query: 1008 KSS 1010
            + S
Sbjct: 899  RVS 901


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/911 (44%), Positives = 557/911 (61%), Gaps = 102/911 (11%)

Query: 157  HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAG 216
             +KG S D  R+S+SSA+S+SS GSG DD +S GDV++WGE   D     G   +   A 
Sbjct: 187  QVKGASSD-IRISVSSALSTSSHGSG-DDSESFGDVYVWGEVMCDTTCRQGSDSNAYSAT 244

Query: 217  VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
               D  VPK +ES V+LDV  +ACG +HAALVT+Q EVF+WGEE  GRLGHG  + +  P
Sbjct: 245  AATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQP 304

Query: 277  KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
            +L+++L   NVE +ACGE HTCA+T +GD+YTWG    N GLLGHG+ +S W+PK+++GP
Sbjct: 305  RLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGP 364

Query: 337  LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
            LEG+ VS+VSCG WHTA++TS+G+L+TFGDGTFGVLGHG+R ++S P+EV+SLKGLRT+ 
Sbjct: 365  LEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTIS 424

Query: 397  AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
             +CGVWHTAAVVEV++   + SN SSGKLFTWGDGD+ RLGHGD+ ++L PTCV +L++ 
Sbjct: 425  VSCGVWHTAAVVEVIM---AQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY 481

Query: 457  NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
            NF +  CGH+LT+ LTT+GH++T GS VYGQLG+P  +G+ P  VE KL    V E+ACG
Sbjct: 482  NFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVACG 541

Query: 517  DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
             YHVAVLT   EVYTWGKGANGRLGHGD  DR  P+ VEAL+D+ VK I CG+ FTAAIC
Sbjct: 542  AYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAIC 601

Query: 577  LHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRV 636
             HK VSG++QS CS CR PF F RKRHNCYNCGLV+CH+CSSKK+++A+++PNP KPYRV
Sbjct: 602  QHKSVSGMEQSQCSSCRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRV 661

Query: 637  CDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKV 696
            CD+C+ KL+K  ++    +   + R   +   ++    G    S        S + +K +
Sbjct: 662  CDSCYLKLSKVLDSGIGHNKNNTPRIPGDSKADKMDSKGNRVAS------ANSSDMIKNL 715

Query: 697  ESGSSKRNKKQEFN-------RTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLP 749
            +  ++K+ KK ++        + + +P      Q    N+S  S+P+           LP
Sbjct: 716  DVKAAKQTKKYDYPPQFPAILQLKDIPFIGAADQ--QPNDSTYSSPLL---------RLP 764

Query: 750  GSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTR 809
                 S  +S                      S  I+ D  +   +EV KL+ +V  L +
Sbjct: 765  NLNSSSSLSS---------------------ESFDILRDANELLKQEVQKLKEEVNSLRQ 803

Query: 810  KSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN 869
            + + Q+ +L+++  +  EA+ +A EE +K +AAKDVIKSLTAQLK+MAE LP  +  ++ 
Sbjct: 804  QREQQDADLQKSEAKAHEAMTLASEEASKSKAAKDVIKSLTAQLKEMAERLPPASC-DTK 862

Query: 870  SFHSSPTPAWDVS------------SAAIEQPSSPLT-----FQGAI--------PNGSN 904
                   P   VS              + + P +P +     F G +        PNG N
Sbjct: 863  QTRQPYLPGGAVSPDTGRENQKRYEPGSFQYPQTPTSVASARFNGFLAQAHQISEPNG-N 921

Query: 905  SLI--------------------LSNGSDFG---DNRSPSQTEASHCEATTKNKNRTMKA 941
            +++                    ++NG   G         + E    +      N    +
Sbjct: 922  TMVPHDSRHENNGNTKEFPVAQQMTNGGMTGYRPRTEDHDRRETERFQINLHGFNMRGSS 981

Query: 942  EPAQGDE--WVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQ 999
             P+   E  W+EQ E GVY+TLV+L  G K+LKRVRFSR++F E QAE WW  NR +VY 
Sbjct: 982  SPSNQVEAEWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQAESWWNDNREKVYD 1041

Query: 1000 QYNVSMVDKSS 1010
            +YNV   D+ S
Sbjct: 1042 KYNVRGTDRIS 1052



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 39/48 (81%), Gaps = 2/48 (4%)

Query: 6   IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALIS 51
           +FQR+  PEK++ SFSLIYND  RSLDLICKDK EAEVWF GL  LIS
Sbjct: 70  VFQRFLLPEKDHLSFSLIYNDGKRSLDLICKDKVEAEVWFAGLNVLIS 117


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
            thaliana]
          Length = 1067

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/863 (46%), Positives = 559/863 (64%), Gaps = 49/863 (5%)

Query: 156  GHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYA 215
            G++   S D FR+S+SS  S SS GSG DD +SLGDV++WGE   +GIL  G   + S  
Sbjct: 186  GNMLRPSTDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDG---TASNE 242

Query: 216  GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
             VK D   P+ +ES VVLDV  I CG RH ALVT+QGEVF+WGEE+GGRLGHG+  D+S 
Sbjct: 243  TVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISR 302

Query: 276  PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
            PKL++ L   N++ VACGE+HTC V+ SGD+++WG    N GLLGHG+++S W+PK+++G
Sbjct: 303  PKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSG 362

Query: 336  PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            PLEG+ V SV+CG WH+A+ T+ G+LFTFGDG FGVLGHG+R SVS P+EV SL GL+TV
Sbjct: 363  PLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTV 422

Query: 396  RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            + AC +WHTAA+VEVM    ++++ SS KLFTWGDGD+ RLGHG+KE  L+PTCV++L++
Sbjct: 423  KVACSIWHTAAIVEVM--GQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLID 480

Query: 456  PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 515
             NF +++CGH+ TVALTT+GHV+TMG   +GQLG+  ++GKLP  V+ +L   FVEEIAC
Sbjct: 481  YNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIAC 540

Query: 516  GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G +HVAVLTSR+EV+TWGKGANGRLGHGDT+D+  P+LVEAL+D+ VKS+ CG++FT++I
Sbjct: 541  GAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSI 600

Query: 576  CLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYR 635
            C+HKWVSG DQS+CSGCR  F F RKRHNCYNCGLV+CH CSSKK++KA++AP P KP+R
Sbjct: 601  CIHKWVSGADQSICSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHR 660

Query: 636  VCDNCFGKLTKATETSSSSHSTVSRR-GSMNQGFNEAVEHGENFVSRSHVQFGTSMESLK 694
            VCD C+ KL KA E+  SS+  V+R   +  +  + +V         S V    +  S+ 
Sbjct: 661  VCDACYSKL-KAAESGYSSN--VNRNVATPGRSIDGSVRTDRETTRSSKVLLSANKNSVM 717

Query: 695  KV-------ESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKK----- 742
                     ES +++ ++     + + +  P+ +S   A+ N  +  PV   T       
Sbjct: 718  SSSRPGFTPESSNARASQVPSLQQLKDIAFPSSLS---AIQN--AFKPVVAPTTTPPRTL 772

Query: 743  FFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVI 798
                S P      R++SP +RR SPPR        SG +  + V+D  ++T+E    E+ 
Sbjct: 773  VIGPSSPSPPPPPRSSSPYARRPSPPRT-------SGFS--RSVIDSLRKTNEVMNQEMT 823

Query: 799  KLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAE 858
            KL +QV+ L ++   Q  E+ER  +  K+A  +A  +++K +AA + +KS+  QLK++ E
Sbjct: 824  KLHSQVKNLKQRCNNQGTEIERFQKAAKDASELAARQSSKHKAATEALKSVAEQLKELKE 883

Query: 859  MLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNR 918
             LP   V  S +F S  + A    +A     +SPLT  G                  + +
Sbjct: 884  KLP-PEVSESEAFESINSQAEAYLNANKVSETSPLTTSGQEQETYQKT---------EEQ 933

Query: 919  SPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSR 978
             PS +  +   ++++  +    +    G E  EQ E GVY+T      G K  +RVRFS+
Sbjct: 934  VPSNSSITETSSSSRAPSTEASSSRISGKESKEQFEPGVYVTYEVDMNGNKIFRRVRFSK 993

Query: 979  KKFSEKQAEQWWAANRARVYQQY 1001
            K+F E QAE WW  N+ R+ + Y
Sbjct: 994  KRFDEHQAEDWWTKNKDRLLKCY 1016



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 45/58 (77%), Gaps = 2/58 (3%)

Query: 6   IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAE 61
           +F+R+ RPEK++ SFSL+YN  +RSLDLICKDK E EVWF  LK LI +S  R+ R+E
Sbjct: 83  VFKRFLRPEKDHLSFSLLYNNRERSLDLICKDKAETEVWFAALKFLIEKSRNRRARSE 140


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/1044 (42%), Positives = 608/1044 (58%), Gaps = 164/1044 (15%)

Query: 6    IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALIS--RSHYRKGRAE 61
            +F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+ E EVWF+ L++LI+  R ++     +
Sbjct: 72   VFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQAEVEVWFSTLESLITSCRLNFLN---D 128

Query: 62   SRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALS 121
             ++D VS                   F    +  +D        TSY++     LD A S
Sbjct: 129  GQTDRVS-------------------FSEDVTIYQDS-------TSYDT----TLDIASS 158

Query: 122  -----DAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSS 176
                 ++  Y+ P            S+NS+ +     R   L+  +GD  RVS+SSA SS
Sbjct: 159  ITRSFNSAGYSTP-----------NSLNSIRADVGSDRVNMLRASTGDNSRVSISSAPSS 207

Query: 177  SSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQ 236
            SSQ SG DD +SLGDV++WGE                                       
Sbjct: 208  SSQSSGLDDIESLGDVYVWGE--------------------------------------- 228

Query: 237  NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
             IACG RH  L T+QGEVF+WGEELGGRLGHG D+D+  PKL+++L   NVE +ACGE H
Sbjct: 229  QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFH 288

Query: 297  TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            TC VT SGD+Y WG  + N GLLGHG  +S WLPK+++GPLEG+ V SV+CG WH+A+  
Sbjct: 289  TCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALTM 348

Query: 357  SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            S+G+LFTFGDGTFG LGHGDR SV+ P+EV++L G R ++ ACGVWH+AA+VE+     +
Sbjct: 349  SSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEI--SGQA 406

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
            S+N  S KLFTWGDGD+ RLGHGDKEA+LVPTCV ALV+ NF QV+CGHS+TVAL T+GH
Sbjct: 407  STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGH 466

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            V+TMGS   GQLG+PKA+GK P  V+ KL    VEEI+CG  HVA LTSR+EVYTWG GA
Sbjct: 467  VFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGA 526

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 596
            NGRLGHG  +D+  P+LV+ALKD+ VKSI CG++FT  IC+HKWVSG DQS+CSGCR PF
Sbjct: 527  NGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCSGCRQPF 586

Query: 597  NFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATET---SSS 653
             F RKRHNCYNCGLV+CH CSS+K +KA++AP P KP+RVCD+CF KL KA +T   SS 
Sbjct: 587  GFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKL-KAADTGVISSY 645

Query: 654  SHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTR 713
            +   V  R S++    + +E  E  +  S +   +  E +K  E+    +N + E     
Sbjct: 646  NKRNVITRRSID--IKDKLERPE--IRPSRLATTSPAEPVKYQET----KNVRNETKPAD 697

Query: 714  GLPLPNGVSQGNALNNSK--SSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRAT 771
             + +    SQ  A+   K  +    FG+      +   G ++  +   P    S P +  
Sbjct: 698  PMSMMKA-SQVPAMLQFKDMAFAGTFGTVPTTVKSMTMGGQM--QMGMPMFSPSPPSKKP 754

Query: 772  TPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKE 827
            +P P  +     K+  D  K+T+E    ++ KL++QV +L +K + Q+ +L++  R+ K+
Sbjct: 755  SPPPATASPLIGKVDNDGLKKTNELLNQDISKLQSQVNKLKQKCETQDEQLQKAERKAKQ 814

Query: 828  ALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIE 887
            A ++A EE+A+     D +K L ++LK +A+ +P     N  +  S        S   + 
Sbjct: 815  AASMASEESARRNTVLDFVKHLDSELKVIADRVPGDVADNLKTLQSQ-------SERFLA 867

Query: 888  QPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPS---------------------QTEAS 926
              SS L            +    G D G +RS S                         S
Sbjct: 868  GQSSNLV----------EITGLTGHDIGHHRSSSTGSLPVSQDGSSGNASGSSIAMASDS 917

Query: 927  HCEATTKNKNRTMKA----EPAQGD----EWVEQDETGVYITLVALPGGLKDLKRVRFSR 978
             C    +N    +KA     P  G     + +EQ E GVY+TL+ L  G K  KRVRFS+
Sbjct: 918  PCHRIMEN---NLKAPGDFAPKYGTHGEVQLIEQFEPGVYVTLIQLRDGTKVFKRVRFSK 974

Query: 979  KKFSEKQAEQWWAANRARVYQQYN 1002
            ++F+E+QAE+WW  N+ RV+++YN
Sbjct: 975  RRFAEQQAEEWWRENQERVFKKYN 998


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1043

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/870 (46%), Positives = 564/870 (64%), Gaps = 68/870 (7%)

Query: 156  GHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYA 215
            G++   S D FR+S+SS  S SS GSG DD +SLGDV++WGE   +GIL  G   + S  
Sbjct: 177  GNMLRPSTDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDG---TVSKE 233

Query: 216  GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
             VK D   P+ +ES VVLDV  I CG RH ALVT+QGEVF+WGEE+GGRLGHG+  D+S 
Sbjct: 234  TVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISR 293

Query: 276  PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
            PKL++ L   N++ VACGE+HTC V+ SGD+++WG    N GLLGHG+++S W+PK+++G
Sbjct: 294  PKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSG 353

Query: 336  PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            PLEG+ V SV+CG WH+A+ T+ G+LFTFGDG FGVLGHG+R SVS P+EV SL GL+TV
Sbjct: 354  PLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTV 413

Query: 396  RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            + AC +WHTAA+VEVM    + ++ SS KLFTWGDGD+ RLGHG+KE  L+PTCV++L++
Sbjct: 414  KVACSIWHTAAIVEVM--GQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLID 471

Query: 456  PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 515
             NF +++CGH+ TVALTT+GHV+TMG   +GQLG+  ++GKLP  V+ +L   FVEEIAC
Sbjct: 472  YNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIAC 531

Query: 516  GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            GD+HVAVLTSR+EV+TWGKGANGRLGHGDT+D+  P+ VEAL+D+ VKS+ CG++FT++I
Sbjct: 532  GDHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTCVEALRDRHVKSLSCGSNFTSSI 591

Query: 576  CLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYR 635
            C+HKWVSG DQS+CSGCR  F F RKRHNCYNCGLV+CH CSSKK++KA++AP P KP+R
Sbjct: 592  CIHKWVSGADQSICSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHR 651

Query: 636  VCDNCFGKLTKATETSSSSHSTVSRR-GSMNQGFNEAVEHGENFVSRSHVQFGTSMESLK 694
            VCD C+ KL KA E+  SS+  V+R   +  +  + +V   +     S V    +  S++
Sbjct: 652  VCDACYSKL-KAAESGYSSN--VNRNVATPGRSIDGSVRSDKETTRSSKVLLSANTNSVR 708

Query: 695  KV-------ESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSAS 747
                     +S +++ ++     + + +  P+ +S   A+ N  +  PV   T       
Sbjct: 709  SSSRPGLTPDSSNARASQVPSLQQLKDIAFPSSLS---AIQN--AFKPVIAPTTTPPRPL 763

Query: 748  LPGSRIMSRATSPT-----SRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVI 798
            + G    S    P      +RR+SPPR        SG +  + V+D  K+T+E    E+ 
Sbjct: 764  VVGPSSPSPPPPPRSSSPYARRTSPPRT-------SGFS--RSVIDSLKKTNEVMNQEMT 814

Query: 799  KLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAE 858
            KL++Q     ++   Q  E+ER  +  K+A  +A ++++K +AA + +KS+  QLK++ +
Sbjct: 815  KLQSQ-----QRCNNQGTEIERFQKAAKDAFELAAKQSSKHKAATEALKSVAEQLKELKD 869

Query: 859  MLPVGAVRNSNSFHS--SPTPAWDVSSAAIEQPSSPLTFQGA---IPNGSNSLILSNGS- 912
             LP   V  S +F S  S   A+  ++ A+E  +S LT  G        +   + SN S 
Sbjct: 870  KLP-PEVSESEAFESINSQAEAYLNANEALE--TSLLTTSGQEQETYQKTEEQVSSNSSI 926

Query: 913  -DFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDL 971
             +  ++  P  TEAS         +RT       G E  EQ E GVY+T      G K  
Sbjct: 927  TEASNSSRPPSTEAS--------SSRT------SGKESKEQFEPGVYVTYEVDMNGNKIF 972

Query: 972  KRVRFSRKKFSEKQAEQWWAANRARVYQQY 1001
            +RVRFS+K+F E QAE WW  N+ R+ + Y
Sbjct: 973  RRVRFSKKRFDEHQAEDWWTKNKDRLLKCY 1002



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 2/55 (3%)

Query: 9   RYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAE 61
           R+ RPEK++ SFSL+YN  +RSLDLICKDK E EVWF GLK LI +S  R+ R+E
Sbjct: 77  RFLRPEKDHLSFSLLYNNRERSLDLICKDKAETEVWFAGLKFLIEKSRNRRARSE 131


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
            finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
            finger domain [Arabidopsis thaliana]
          Length = 1045

 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/863 (46%), Positives = 556/863 (64%), Gaps = 54/863 (6%)

Query: 156  GHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYA 215
            G++   S D FR+S+SS  S SS GSG DD +SLGDV++WGE   +GIL  G   + S  
Sbjct: 177  GNMLRPSTDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDG---TASNE 233

Query: 216  GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
             VK D   P+ +ES VVLDV  I CG RH ALVT+QGEVF+WGEE+GGRLGHG+  D+S 
Sbjct: 234  TVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISR 293

Query: 276  PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
            PKL++ L   N++ VACGE+HTC V+ SGD+++WG    N GLLGHG+++S W+PK+++G
Sbjct: 294  PKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSG 353

Query: 336  PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            PLEG+ V SV+CG WH+A+ T+ G+LFTFGDG FGVLGHG+R SVS P+EV SL GL+TV
Sbjct: 354  PLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTV 413

Query: 396  RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            + AC +WHTAA+VEVM    ++++ SS KLFTWGDGD+ RLGHG+KE  L+PTCV++L++
Sbjct: 414  KVACSIWHTAAIVEVM--GQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLID 471

Query: 456  PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 515
             NF +++CGH+ TVALTT+GHV+TMG   +GQLG+  ++GKLP  V+ +L   FVEEIAC
Sbjct: 472  YNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIAC 531

Query: 516  GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G +HVAVLTSR+EV+TWGKGANGRLGHGDT+D+  P+LVEAL+D+ VKS+ CG++FT++I
Sbjct: 532  GAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSI 591

Query: 576  CLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYR 635
            C+HKWVSG DQS+CSGCR  F F RKRHNCYNCGLV+CH CSSKK++KA++AP P KP+R
Sbjct: 592  CIHKWVSGADQSICSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHR 651

Query: 636  VCDNCFGKLTKATETSSSSHSTVSRR-GSMNQGFNEAVEHGENFVSRSHVQFGTSMESLK 694
            VCD C+ KL KA E+  SS+  V+R   +  +  + +V         S V    +  S+ 
Sbjct: 652  VCDACYSKL-KAAESGYSSN--VNRNVATPGRSIDGSVRTDRETTRSSKVLLSANKNSVM 708

Query: 695  KV-------ESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKK----- 742
                     ES +++ ++     + + +  P+ +S   A+ N  +  PV   T       
Sbjct: 709  SSSRPGFTPESSNARASQVPSLQQLKDIAFPSSLS---AIQN--AFKPVVAPTTTPPRTL 763

Query: 743  FFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVI 798
                S P      R++SP +RR SPPR        SG +  + V+D  ++T+E    E+ 
Sbjct: 764  VIGPSSPSPPPPPRSSSPYARRPSPPRT-------SGFS--RSVIDSLRKTNEVMNQEMT 814

Query: 799  KLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAE 858
            KL +Q     ++   Q  E+ER  +  K+A  +A  +++K +AA + +KS+  QLK++ E
Sbjct: 815  KLHSQ-----QRCNNQGTEIERFQKAAKDASELAARQSSKHKAATEALKSVAEQLKELKE 869

Query: 859  MLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNR 918
             LP   V  S +F S  + A    +A     +SPLT  G                  + +
Sbjct: 870  KLP-PEVSESEAFESINSQAEAYLNANKVSETSPLTTSGQEQETYQKT---------EEQ 919

Query: 919  SPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSR 978
             PS +  +   ++++  +    +    G E  EQ E GVY+T      G K  +RVRFS+
Sbjct: 920  VPSNSSITETSSSSRAPSTEASSSRISGKESKEQFEPGVYVTYEVDMNGNKIFRRVRFSK 979

Query: 979  KKFSEKQAEQWWAANRARVYQQY 1001
            K+F E QAE WW  N+ R+ + Y
Sbjct: 980  KRFDEHQAEDWWTKNKDRLLKCY 1002



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 2/55 (3%)

Query: 9   RYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAE 61
           R+ RPEK++ SFSL+YN  +RSLDLICKDK E EVWF  LK LI +S  R+ R+E
Sbjct: 77  RFLRPEKDHLSFSLLYNNRERSLDLICKDKAETEVWFAALKFLIEKSRNRRARSE 131


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/910 (44%), Positives = 554/910 (60%), Gaps = 100/910 (10%)

Query: 157  HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAG 216
             +KG S D  R+S+SSA+S+SS GSG DD +S GDV++WGE   D     G   +   A 
Sbjct: 212  QVKGASSD-IRISVSSALSTSSHGSG-DDSESFGDVYVWGEVMCDTTCRQGSDSNAYSAT 269

Query: 217  VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
               D  VPK +ES V+LDV  +ACG +HAALVT+Q EVF+WGEE  GRLGHG  + +  P
Sbjct: 270  AATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQP 329

Query: 277  KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
            +L+++L   NVE +ACGE HTCA+T +GD+YTWG    N GLLGHG+ +S W+PK+++GP
Sbjct: 330  RLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGP 389

Query: 337  LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
            LEG+ VS+VSCG WHTA++TS+G+L+TFGDGTFGVLGHG+R ++S P+EV+SLKGLRT+ 
Sbjct: 390  LEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTIS 449

Query: 397  AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
             +CGVWHTAAVVEV++   + SN SSGKLFTWGDGD+ RLGHGD+ ++L PTCV +L++ 
Sbjct: 450  VSCGVWHTAAVVEVIM---AQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY 506

Query: 457  NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
            NF +  CGH+LT+ LTT+GH++T GS VYGQLG+P  +G+ P  VE KL    V E+ CG
Sbjct: 507  NFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVVCG 566

Query: 517  DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
             YHVAVLT   EVYTWGKGANGRLGHGD  DR  P+ VEAL+D+ VK I CG+ FTAAIC
Sbjct: 567  AYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAIC 626

Query: 577  LHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRV 636
             HK VSG++QS CS CR PF F RKRHNCYNCGLV+CH+CSSKK+++A+++PNP KPYRV
Sbjct: 627  QHKSVSGMEQSQCSSCRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRV 686

Query: 637  CDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKV 696
            CD+C+ KL+K  ++    +   + R   +   ++    G    S        S + +K +
Sbjct: 687  CDSCYLKLSKVLDSGIGHNKNNTPRIPGDSKADKMDSKGNRVAS------ANSSDMIKNL 740

Query: 697  ESGSSKRNKKQEFN-------RTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLP 749
            +  ++K+ KK ++        + + +P      Q    N+S  S+P+           LP
Sbjct: 741  DVKAAKQTKKYDYPPQFPAILQLKDIPFIGAADQ--QPNDSTYSSPLL---------RLP 789

Query: 750  GSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTR 809
                 S  +S                      S  I+ D  +   +EV KL+ +V  L +
Sbjct: 790  NLNSSSSLSS---------------------ESFDILRDANELLKQEVQKLKEEVNSLRQ 828

Query: 810  KSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAE----------- 858
            + + Q+ +L+++  +  EA+ +A EE +K +AAKDVIKSLTAQLK+MAE           
Sbjct: 829  QREQQDADLQKSEAKAHEAMTLASEEASKSKAAKDVIKSLTAQLKEMAERLPPASCDMKQ 888

Query: 859  ----MLPVGAV-----------RNSNSFHSSPTPAWDVSS------AAIEQPSSPLTFQG 897
                 LP GAV               SF    TP    S+      A   Q S P     
Sbjct: 889  TRQPYLPGGAVSPDTGRENQKRYEPGSFQYPQTPTSVASARFNGFLAQAHQISEP-NGNT 947

Query: 898  AIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNR-------------TMKAEPA 944
             +P+ S      N  +F   +  +    +     T++ +R              M+   +
Sbjct: 948  MVPHDSRHENNGNTKEFPVAQQMTNGGMTGYRPRTEDHDRRETERFQINLHGFNMRGSSS 1007

Query: 945  QGD----EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQ 1000
              +    EW+EQ E GVY+TLV+L  G K+LKRVRFSR++F E QAE WW  NR +VY +
Sbjct: 1008 PSNQVEAEWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQAESWWNDNREKVYDK 1067

Query: 1001 YNVSMVDKSS 1010
            YNV   D+ S
Sbjct: 1068 YNVRGTDRIS 1077



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 39/48 (81%), Gaps = 2/48 (4%)

Query: 6   IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALIS 51
           +FQR+  PEK++ SFSLIYND  RSLDLICKDK EAEVWF GL  LIS
Sbjct: 95  VFQRFLLPEKDHLSFSLIYNDGKRSLDLICKDKVEAEVWFAGLNVLIS 142


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/660 (55%), Positives = 465/660 (70%), Gaps = 48/660 (7%)

Query: 6   IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
           +F+RY RPEK+Y SFSLIY+  DRSLDLICKDK E EVWF GLK+LI ++  R  +A+S 
Sbjct: 82  VFRRYLRPEKDYLSFSLIYHNGDRSLDLICKDKAETEVWFAGLKSLIRQN--RNKQAKSE 139

Query: 64  SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
             EVS +  S    T R S  S  F    + +          TS +   +N   K  S  
Sbjct: 140 IPEVS-IHDSDCFSTGRPSTASIDFAPNNTRRG--------RTSIDLGIQNSPTKFGSSD 190

Query: 124 VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGH 183
           V Y                             G++   S D FR+S+SS  S S+  SG 
Sbjct: 191 VGY---------------------------ERGNMLRPSTDGFRISVSSTPSCSTGTSGP 223

Query: 184 DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
           DD +SLGDV++WGE   DGI   G+  S +   VK+D  +PK +ES VVLDV  IACG R
Sbjct: 224 DDIESLGDVYVWGEVWSDGISPDGVVNSTT---VKIDVLIPKPLESNVVLDVHQIACGVR 280

Query: 244 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
           H ALVT+QGEVF+W EE GGRLGHG+  DV  PKL++ L   N++ VACGE+HTCAV+ S
Sbjct: 281 HIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVSTS 340

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           GD++TWG    N GLLGHG+++S W+PK+++GP+EG+ V SV+CG WH+A+ T+ G+LFT
Sbjct: 341 GDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKLFT 400

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           FGDG FGVLGHGDR SVS P+EV  L GL+T++ ACGVWHT A+VEVM  + +S+  SS 
Sbjct: 401 FGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTST--SSR 458

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           KLFTWGDGD+ RLGHG+KE  L+PTCV++L++ NF Q++CGH+ TVALTT+GHV+TMG  
Sbjct: 459 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGT 518

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            +GQLG   ++GKLP  V+ +L   FVEEI+CGD+HVAVLTSR+EV+TWGKG+NGRLGHG
Sbjct: 519 SHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHG 578

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
           D DDR  P+LVEAL+++ VKSI CG++FT++IC+HKWVSG DQS+CSGCR  F F RKRH
Sbjct: 579 DKDDRKTPTLVEALRERHVKSISCGSNFTSSICIHKWVSGADQSVCSGCRQAFGFTRKRH 638

Query: 604 NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
           NCYNCGLV+CH CSSKK++KA++AP P KP+RVCD C+ KL KA E  S  +S V+ R S
Sbjct: 639 NCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKL-KAGE--SGYNSNVANRNS 695


>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
 gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
          Length = 1061

 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/829 (48%), Positives = 536/829 (64%), Gaps = 89/829 (10%)

Query: 252  GEVFSWGEELGGRLGHGVD---------SDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
            G+V+ WGE L   +  G D         +DV  P+ +++   ++V  +ACG  H   VT 
Sbjct: 237  GDVYIWGEVLCS-VKVGADKNTSYLSTRADVLLPRPLESNVVLDVHHIACGVRHAAMVTR 295

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLP-KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
             G+++TWG  +   G LGHG    +  P  +++GPLEG+ V+SV+CGPWHTA+VTS GQL
Sbjct: 296  QGEVFTWGEESG--GRLGHGAGKDVIQPCLRISGPLEGLQVASVTCGPWHTALVTSMGQL 353

Query: 362  FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            FTFGDGTFGVLGHG+R +V+ PREV+SL GLRT+  ACGVWHTAAVVEV+V + SSS+ S
Sbjct: 354  FTFGDGTFGVLGHGNRENVAYPREVESLAGLRTIAVACGVWHTAAVVEVIV-TQSSSSAS 412

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            SGKLFTWGDGD+ RLGHGDKE RL PTCV AL++ NF +++CGHSLTV LTT GHV+TMG
Sbjct: 413  SGKLFTWGDGDKNRLGHGDKEPRLEPTCVPALIDYNFHKIACGHSLTVGLTTAGHVFTMG 472

Query: 482  SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            S VYGQLG+P A+GK+P  VE KL    VEEIACG YHVA LTSR EVYTWGKGANGRLG
Sbjct: 473  STVYGQLGNPCADGKVPCLVEDKLYGESVEEIACGAYHVAALTSRNEVYTWGKGANGRLG 532

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRK 601
            HGD +DR  P++VEALKD+ VK I CG +++AAIC HKWVSG +QS CS CR  F F RK
Sbjct: 533  HGDGEDRKTPTIVEALKDRHVKYIACGANYSAAICFHKWVSGSEQSQCSSCRQAFGFTRK 592

Query: 602  RHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRR 661
            RHNCYNCGLV+CH+CSS+K+ +A++APNP+KPYRVCD+CF KL K +E S+++      R
Sbjct: 593  RHNCYNCGLVHCHSCSSRKATRAALAPNPSKPYRVCDSCFVKLNKMSEPSNTNRRNAGPR 652

Query: 662  GSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE-FNRTRGLPLPNG 720
             S      + ++  +  +S+S     ++++ +K+++S ++K+ KK + F+  R    P+ 
Sbjct: 653  LSGEN--KDRLDKADLRLSKSTPP--SNLDLIKQLDSKAAKQGKKADTFSLVRSSQAPSL 708

Query: 721  VSQGNALNNS------KSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPT 774
            +   + + +S      K S PV           L  S + SR+ SP SRR SPPR+ TP 
Sbjct: 709  LQLKDVVLSSAIDLRPKVSKPV-----------LTPSGVSSRSVSPFSRRPSPPRSATPV 757

Query: 775  PTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALA 830
            PT+SGL+  K + D  K+T+E    E +KLR QVE L ++ + QE+EL+++ ++++EA+A
Sbjct: 758  PTMSGLSFTKSIADSLKKTNELLNQEALKLRTQVESLRQRCEFQELELQKSAKKIQEAMA 817

Query: 831  VAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQP- 889
            VA EE+AK +AAKDVIKSLTAQLKDMAE LP G V ++ S   S  P   + +  I  P 
Sbjct: 818  VAAEESAKSKAAKDVIKSLTAQLKDMAERLPPG-VYDTESMKLSYLPN-GLETNGIHYPD 875

Query: 890  -----------------SSPLTFQGAIPNGSNSLILS-------NGSDF---------GD 916
                             +SP        NG+ S+  S       NG D          G 
Sbjct: 876  TNGGRHSRSDSIRGTSLASPTRSDSTSINGTLSIAQSFRDSPGTNGRDDHLAARLSNGGG 935

Query: 917  NRSPSQTEASHC------------EATTKNKNRTMKAEPAQGD-EWVEQDETGVYITLVA 963
               PS    S              +   K+++ ++ A   Q + EW+EQ E GVYITLVA
Sbjct: 936  GVQPSGNSMSEAIDGKEPWSPQDGDNGMKSRDSSLVANGNQVEAEWIEQYEPGVYITLVA 995

Query: 964  LPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVS 1012
            L  G +DLKRVRFSR++F E QAE WW+ NR +VY++YNV   DKSSV+
Sbjct: 996  LRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYEKYNVKGSDKSSVT 1044


>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/1020 (41%), Positives = 599/1020 (58%), Gaps = 52/1020 (5%)

Query: 7    FQRYPRPEKEYQSFSLIY--NDRSLDLICKDKDEAEVWFTGLKALISR-SHYRKGRAESR 63
            FQR  + E+E +SFSL+Y   +RSLDLICKDK +A+ WF GLKA+ISR  H R+      
Sbjct: 79   FQRQLQEERECRSFSLVYANGERSLDLICKDKAQADSWFLGLKAVISRCQHPRQLSTFRN 138

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
               V +   SP  + +R   L     +   SQ   L          SP +++ ++  SD 
Sbjct: 139  CVGVQTCFNSPAGYFRRKHNLGLLEDTPKFSQVRSL--------CGSPTQSLSERCFSDG 190

Query: 124  VLYAAPPKVLLPSESA-CGSVNSLSSGGSDG-RTGHLKG----LSGDTFRVSLSSAVSSS 177
            + Y+A       S  +   +V  +S   S      HLK      +G   +  + S V++ 
Sbjct: 191  LSYSADSFYSSESSVSNVKNVVDVSLPSSPYVEPDHLKQGEEIYAGTEIQTDMLSQVAAP 250

Query: 178  SQGSGH-DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQ 236
            S  S   +  D L DV IWGE    GILGGG++R G+  G++ D+ +PK +ES  +LDV+
Sbjct: 251  SHASPQMEKNDILRDVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTTMLDVR 310

Query: 237  NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
             I+ GG+HAALVTK GEVF WGE  GG LGH V+ D+ +PK++++L  + V+ V+CGE+ 
Sbjct: 311  EISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQ 370

Query: 297  TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            TCA+T SG++YTWG +     L+G   + S W+P +L+GPL G  +S+V+CG WH A+V+
Sbjct: 371  TCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVS 430

Query: 357  SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            ++GQLFT+GDGTFGVLGHG   S+S P+EV+SL GL    AACG WHTAA+VEV      
Sbjct: 431  TSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVR-ADRL 489

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
              N   GKLFTWGDGD+GRLGHGD+E +L+PTCVA LV+ +F QVSCG  LTV LT  G 
Sbjct: 490  KFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLTCLGT 549

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            VYTMGS V+GQLG+P+A  K    V GKL   FV+EI+ G YHVA LTS+  +YTWG GA
Sbjct: 550  VYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFVKEISSGSYHVAALTSKGSLYTWGMGA 609

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 596
            NG+LG GDT+DRN P++VEAL+D+QV+SI CG+ FTAAICLHK +S  DQS CSGCR+ F
Sbjct: 610  NGQLGLGDTEDRNSPAVVEALRDRQVESIACGSGFTAAICLHKSISSTDQSACSGCRMAF 669

Query: 597  NFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSS---- 652
             F RK+HNCYNCGL++C  CS+KK + AS+APN  KP+RVCD C+  L +   +S     
Sbjct: 670  GFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKPFRVCDPCYTYLQRIKHSSRLLKL 729

Query: 653  SSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRT 712
             +H+      +    F+E  + GE   +R+  QF +  +   +      K+  K +    
Sbjct: 730  ENHNPRQLLMTQKTSFDEKEDRGEGTPART--QFSSVGQPCNEASQSYEKKPFKNQVENQ 787

Query: 713  RGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATT 772
            + +   + +S G           +F    +  S +L        ++ P   + SP  +  
Sbjct: 788  QTVEPVSSLSNGLPRWGQVPCPFLFEKYCRENSIALVPLSNNQLSSVPLCWKHSPRGSKY 847

Query: 773  PTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVA 832
               T+  +   K   D  K   EEV +LR++   L +  Q++  +++   ++L+E  ++A
Sbjct: 848  MVSTVVNME--KDFPDTDKILIEEVERLRSEARSLEKLCQMRSEKIQECQQKLQETWSLA 905

Query: 833  GEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPS-- 890
             EE AKC+AAK+VIK+L+++L  M+E L   + R++     S  P   + +  ++ P   
Sbjct: 906  REEAAKCKAAKEVIKALSSRLHTMSEKL--SSERDAKDGIDSKLP--QIITRYVDTPKER 961

Query: 891  -------SPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEP 943
                   SP+ F       SNSL     S +G +     T +       K   R    +P
Sbjct: 962  QLDSLCGSPIVF-------SNSL----RSMYGRDECQGHTRSVEDSCLEKIDPRQNGTKP 1010

Query: 944  AQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            ++  EWVEQ E GVYIT + L  G + LKRVRFSRK+F+EK+AE+WW  N+  VYQ Y +
Sbjct: 1011 SK-LEWVEQYEPGVYITFITLASGQRGLKRVRFSRKRFTEKEAERWWEENQIGVYQNYGI 1069


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/695 (52%), Positives = 491/695 (70%), Gaps = 19/695 (2%)

Query: 158 LKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGV 217
           +KG S D  R S+SSA S+SS GS  D+ DSLGDV++WGE   D  +  G     S  G 
Sbjct: 3   MKGPSSDVLRASISSAPSTSSHGSAQDECDSLGDVYVWGEVVCDTSVRTGSDTVISSTG- 61

Query: 218 KMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           ++D  +PK +ES +VLDV ++ CG +HAALV K GEVF+WGE+ GGRLGHG   D   P+
Sbjct: 62  RIDILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPR 121

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL 337
           L+++L   NV+ VACGE HTCAVT +G++YTWG    N GLLGHGN++  W+PK+++G L
Sbjct: 122 LVESLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGAL 181

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           EG+ V+ VSCG WHTA++TS GQLFTFGDG+FGVLGHGD  SVS PREV+SL GL+T+  
Sbjct: 182 EGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAV 241

Query: 398 ACGVWHTAAVVEVMVGSSSSS-NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
           ACGVWHTAA+VEV+V  SSSS   S+GKLFTWGDGD+ RLGHGDKE RL PTCVA L++ 
Sbjct: 242 ACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDH 301

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
           +F +V+CGHSLTVALTT+G V +MG+ VYGQLG+P ++G++P  VE K+    V +IACG
Sbjct: 302 DFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACG 361

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
            YHVAVLT+R+EV+TWGKGANGRLGHGDT+DR  P+LVEALKD+ V+ I CG +FTAAIC
Sbjct: 362 SYHVAVLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGANFTAAIC 421

Query: 577 LHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRV 636
            +KWVSG DQS CS CR PF F RKR NCYNCGLV+C++C+S+K+++AS+AP+P KPYRV
Sbjct: 422 QYKWVSGADQSQCSSCRQPFGFTRKRRNCYNCGLVHCNSCTSRKALRASLAPSPGKPYRV 481

Query: 637 CDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKV 696
           CD+CF KL  A++ ++++      R      +     +G+  V ++     ++ME ++ +
Sbjct: 482 CDSCFLKLNNASDPNAAN------RRKDPVPYQPVESNGDAKVGKA--SLPSNMEMIRNL 533

Query: 697 ESGSSKRNKKQEFNRTRGLPLPNGVSQGN--ALNNSKSSNPVFGSTKKFFSASLPGSRIM 754
           +  ++ + KK +       P  + + Q +  AL+     N    S  +    S   S   
Sbjct: 534 DIKAAWQGKKTDGLSFLRNPQVSSLLQLSDIALSGGLGMNR---SAPRAVHISAARSVTT 590

Query: 755 SRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRK 810
           SRA SP SR+ SPPR+TTP PT  GL+  K   D+  + +E    EV +LRAQV+ L  +
Sbjct: 591 SRAVSPFSRKPSPPRSTTPVPTAHGLSFSKSATDNIVKANELLNQEVERLRAQVDNLRNR 650

Query: 811 SQLQEIELERTTRQLKEALAVAGEETAKCRAAKDV 845
            +LQE+EL+++ +++ EA+ +  EE+AK +AAK+V
Sbjct: 651 CELQELELQKSAKKVLEAMTLVAEESAKSKAAKEV 685


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/867 (44%), Positives = 539/867 (62%), Gaps = 61/867 (7%)

Query: 184  DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
            DD +SLGDV+IWGE   DG    G+  S   A  K D   PK +ES VVLDV  I  G R
Sbjct: 213  DDIESLGDVYIWGEVWADGNSFDGLG-SQLQAFCKTDVLTPKPLESDVVLDVHQIGPGDR 271

Query: 244  HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            H ALVT+QGEVF+WGE+ GGRLGHG + D   P L+++L   NV  VACGE+H+CAV+ S
Sbjct: 272  HIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSTS 331

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            GD++TWG      GLLGHG ++S W+PK+++GPLEG+ V +V+CG WH+A+ TS G+LFT
Sbjct: 332  GDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVACGTWHSALATSNGKLFT 391

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            FGDG FGVLGHG+R SV+ P+EV  L G + ++ ACGVWH+AA+++VM    S S  S+ 
Sbjct: 392  FGDGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVACGVWHSAAIIDVM--DLSGSKASAK 449

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            +LFTWGDGD+ RLGH +KE  L PTCVAA+ E NF QV+CG+++TVALT +GHV++MG  
Sbjct: 450  RLFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQVACGYTMTVALTASGHVFSMGGT 509

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
             YGQLG+P ++GK+P  V  KL   FVEEI+CG  HVAVLTSR+E+YTWG+GANGRLGHG
Sbjct: 510  TYGQLGNPNSDGKVPILVRDKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHG 569

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            DTDD+  P+LVEALKD+ VK+I CG++FT+ ICLHKWVSGVDQS+CS CR PF F RKRH
Sbjct: 570  DTDDKKSPTLVEALKDRHVKNISCGSTFTSCICLHKWVSGVDQSVCSDCRQPFGFTRKRH 629

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCY+CGLVYCH CSSKK+ KA++AP P+KP+RVCD C+ KL K ++++S  +  +SR  S
Sbjct: 630  NCYHCGLVYCHPCSSKKASKAALAPTPSKPHRVCDACYAKL-KGSDSASDFNREISRPSS 688

Query: 664  MNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNR-TRGLPLPNGVS 722
               G  E+   GE  V  S V    + E +K +E  ++K     +F+   R   +P    
Sbjct: 689  SVYG-RESFHRGE--VRSSRVLLPPTTEPVKYLEIRTNKPGNMHDFSSIVRAAQVP---- 741

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLAS 782
               +L     + P+  S+ +  +   P  +      +     S   R     P  +    
Sbjct: 742  --TSLQLKDVAFPISLSSAQ--NVYKPVIQPTPPTPATPIPMSPYARRPPSPPRSTSPGF 797

Query: 783  PKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
             + ++D+ ++     +++V K +   + L +KS +Q++++    + ++EA++  GEE++K
Sbjct: 798  SRSLIDNLRKKNDHLNQQVSKWQNNNQNLKQKSDMQDMKIRELQKNIEEAVSRVGEESSK 857

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNSN--SFHSSPTP------------------- 877
             R AK++IKSLT +L+++ E LP+    N    + H+                       
Sbjct: 858  LRKAKELIKSLTDKLREVTEKLPLEIPDNETLRTMHAQAEEFLHEEKDFESSSSPQSLES 917

Query: 878  ----AWDVSSAAIEQPSSPLTFQ---------GAIPNGSNSLILSNGSDFGDNRSPSQTE 924
                A DV   A E  SS L  Q         G +P+     IL   S    N S S   
Sbjct: 918  EQQSAPDV--PASESDSSKLQEQRMEGNDDAFGVVPSIDGENILEESS----NSSVSGPV 971

Query: 925  ASHCEATTKNKNRTMKAEPAQGDEWV-EQDETGVYITLVALPGGLKDLKRVRFSRKKFSE 983
             +   +   +K R       +G++ V EQ E GVY+TLV LP G K  KR+RFS+++F+E
Sbjct: 972  VTSPSSGNGSKLRDTGIPVTEGEKSVIEQFEHGVYVTLVVLPRGYKVFKRIRFSKRRFNE 1031

Query: 984  KQAEQWWAANRARVYQQYNVSMVDKSS 1010
            KQAE+WW  N+ +V+ +YN+ +   ++
Sbjct: 1032 KQAEEWWNQNKDKVHSKYNLPITKNAT 1058



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 3/68 (4%)

Query: 6   IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISR-SHYRKGRAES 62
           +F+RY RPEK+Y SFSLIY   +RSLDLICK++ E EVWF+ LKALIS     R+G ++ 
Sbjct: 77  VFRRYLRPEKDYLSFSLIYKKGERSLDLICKNQAEVEVWFSSLKALISPGERIRRGTSDL 136

Query: 63  RSDEVSSV 70
            +D V  +
Sbjct: 137 SNDSVDLI 144


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/627 (55%), Positives = 462/627 (73%), Gaps = 16/627 (2%)

Query: 243 RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
           RH+A+VT+QGEVF+WGEE GGRLG G+  DV+ P+L++AL    V+LVACGE HTCAVT+
Sbjct: 247 RHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306

Query: 303 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            G++YTWG    N GLLG+G ++S W+PK+++G LEG+ V+ V+CGPWHTA+++S GQLF
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 366

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           TFGDGTFGVLGHGD+ S+S PREVDSL GLRT+  ACGVWHTAAVVEV++  SS+S   S
Sbjct: 367 TFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTS-IPS 425

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           GKLFTWGDGD+ RLGHGDKE RL PTCV AL++ NF +++CGHS+T+ LTT+G V+T+GS
Sbjct: 426 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGS 485

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            VYGQLG+P A+GK P  VE KL     EE+ACG YHV VLTS+ EVYTWGKGANGRLGH
Sbjct: 486 SVYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGH 545

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKR 602
           GD +DR  P+LVE+LKDK VK I CG++++AAICLHK +SG +QS CS CR  F F RKR
Sbjct: 546 GDVEDRKSPTLVESLKDKHVKIIACGSNYSAAICLHKSLSGTEQSQCSACRQAFGFTRKR 605

Query: 603 HNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRG 662
           HNCYNCGLV+CH+CSSKK+++A++AP P K YRVCD+C+ KL+K +E+ S+      R+ 
Sbjct: 606 HNCYNCGLVHCHSCSSKKALRAALAPTPRKSYRVCDSCYAKLSKVSESGSN-----YRKN 660

Query: 663 SMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
           ++ +   E  +  +   +R      ++M+ +K+++S ++K+ K+ +   T  +  P    
Sbjct: 661 AVPRLSGENRDKLDKSDTRPPKTALSNMDLIKQLDSKAAKQGKRTD---TFAVVRPTQAH 717

Query: 723 QGNALNNSKSSNPVFGSTKKFFSASLPGSR-IMSRATSPTSRRSSPPRATTPTPTLSGLA 781
               L +    N V    ++     +P +  + SR+ SP SRRSSPPR+ TP PT SGL+
Sbjct: 718 SLLQLKDGPIPNTV--DIRRLAPKPIPMANGVNSRSVSPLSRRSSPPRSGTPVPTASGLS 775

Query: 782 SPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETA 837
             K + D  K+T+E    EV+ LRAQVE L ++ +LQE+EL ++ ++ +EA+AVA EE+A
Sbjct: 776 FSKGIADSLKKTNELLNQEVLMLRAQVESLRKRCELQELELRKSEKKTEEAIAVAAEESA 835

Query: 838 KCRAAKDVIKSLTAQLKDMAEMLPVGA 864
           K +AAK+VI SLTAQ+K MAE LP G 
Sbjct: 836 KSKAAKEVITSLTAQIKHMAERLPDGV 862



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 147/295 (49%), Gaps = 37/295 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYA-GVKMDSFVPKAVESAVV-LDVQNIACGGRHAAL 247
           G+++ WG+         G+H +G    G  +  ++PK +   +  L V  +ACG  H AL
Sbjct: 308 GELYTWGD---------GVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTAL 358

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL----- 302
           ++  G++F++G+   G LGHG    +S+P+ +D+L  +    VACG  HT AV       
Sbjct: 359 ISSTGQLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQ 418

Query: 303 ------SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
                 SG ++TWG  + N   LGHG++     P  +   ++  +   ++CG   T  +T
Sbjct: 419 SSTSIPSGKLFTWGDGDKN--RLGHGDKEPRLKPTCVPALID-YNFHKIACGHSITIGLT 475

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
           ++GQ+FT G   +G LG+            D L G      ACG +H      VMV +S 
Sbjct: 476 TSGQVFTVGSSVYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYH------VMVLTSK 529

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
           +      +++TWG G  GRLGHGD E R  PT V +L + +   ++CG + + A+
Sbjct: 530 N------EVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSAAI 578



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 60/85 (70%), Gaps = 1/85 (1%)

Query: 929  EATTKNKNRTMKAEPAQGD-EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAE 987
            E+  +++N  +     Q + EW+EQ E GVYITL AL  G +DLKRVRFSR++F E QAE
Sbjct: 991  ESNARSRNSALPGNDNQVEAEWIEQYEPGVYITLTALRNGTRDLKRVRFSRRRFGEHQAE 1050

Query: 988  QWWAANRARVYQQYNVSMVDKSSVS 1012
             WW+ NR +VY++YNV   +KSS+S
Sbjct: 1051 SWWSENRDKVYEKYNVRGTEKSSIS 1075



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 53/84 (63%), Gaps = 1/84 (1%)

Query: 220 DSFVPKAVESAVVLD-VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D   P  VE  ++ +  + +ACG  H  ++T + EV++WG+   GRLGHG   D   P L
Sbjct: 497 DGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTL 556

Query: 279 IDALKNINVELVACGEHHTCAVTL 302
           +++LK+ +V+++ACG +++ A+ L
Sbjct: 557 VESLKDKHVKIIACGSNYSAAICL 580


>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
          Length = 1122

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/858 (44%), Positives = 536/858 (62%), Gaps = 59/858 (6%)

Query: 184  DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
            DD +SLGDV+IWGE   DG    G+   GS A  K D   PK +ES VVLDV  I  G R
Sbjct: 257  DDIESLGDVYIWGEVWVDGNSSDGL---GSLASCKTDVLTPKPLESDVVLDVHQIGPGDR 313

Query: 244  HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            H ALVT+QGEVF+WGE+ GGRLGHG + D   P L+++L   NV  VACGE+H+CAV+ S
Sbjct: 314  HIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSSS 373

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            GD++TWG      GLLGHG ++S W+PK+++GPLEG+ V SV+CG WH+A+ TS G+LFT
Sbjct: 374  GDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACGTWHSALATSNGKLFT 433

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
             GDG FGVLGHGDR SV+ P+EV  L G + ++ ACGVWH+AA++EVM    S SN S+ 
Sbjct: 434  IGDGRFGVLGHGDRDSVAYPKEVQLLSGHKAIKVACGVWHSAAIIEVM--GPSGSNTSAK 491

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            +LFTWGDGD+ RLGH +KE  L PTCVAA+ E NF QV+CG+++TVALTT+GHV+TMG  
Sbjct: 492  RLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGYTMTVALTTSGHVFTMGGT 551

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
             YGQLG+P ++GK+P  V GKL   FVEEI+CG  HVAVLTSR+E+YTWG+GANGRLGHG
Sbjct: 552  AYGQLGNPNSDGKVPILVRGKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHG 611

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            DTDD+  P++VEALKD+ +K+I CG++FT+ ICLHKWVSGVDQS+CS CR PF F RKR 
Sbjct: 612  DTDDQKSPTMVEALKDRHIKNISCGSTFTSCICLHKWVSGVDQSVCSDCRQPFGFTRKRR 671

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCY+CGLVYCH CSSKK+ KA++AP P+KP+RVCD C+ KL K ++++S+ +  +SR  S
Sbjct: 672  NCYHCGLVYCHPCSSKKASKAALAPTPSKPHRVCDACYAKL-KGSDSASNFNRDISRPSS 730

Query: 664  MNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 723
               G  E+   GE  V  S V    ++E +K +E  ++K     + +  R   +P     
Sbjct: 731  SIYG-RESFHRGE--VRSSRVLLPPTIEPVKYLEIRTNKPGSTHD-SIVRAAQVPT---- 782

Query: 724  GNALNNSKSSNPV-FGSTKKFFSASLPGSRIMSRATSPTSRRSSP-PRATTPTPTLSGLA 781
              +L     S P+   S +  +   +  S+  +  TS T    SP  R     P  +   
Sbjct: 783  --SLQLKDVSFPISLSSVQNVYKPVIQPSQPPTPPTSATPIPMSPYARRPPSPPRSTSPG 840

Query: 782  SPKIVVDDAKRTS----EEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETA 837
              + ++D+ ++ +    +EV K + + + L +KS +Q+++++   + ++EA++  GEE++
Sbjct: 841  FSRSLIDNLRKKNDHLNQEVTKWQNKNQNLEQKSDMQDMKIQELQKNIEEAMSQFGEESS 900

Query: 838  KCRAAK-----------DVIKSLTAQLKDMAEMLPVGA-----VRNSNSF---------- 871
            K R AK           +V + L  ++ D   +  + A     +     F          
Sbjct: 901  KLREAKEFIKSLADKLREVTEKLPPEIPDKETLRTMHAQAEEFLHEEKDFESSSSPQSLE 960

Query: 872  ---HSSP-TPAWDVSSAAIEQP--SSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEA 925
                S+P  PA D  S+ ++Q          G +P+     IL   S+   +       +
Sbjct: 961  SEQQSAPDVPASDSDSSKLQQQRVEGNDDASGVVPSIDGENILEESSNSSVSSLVVIPPS 1020

Query: 926  SHCEATTKNKNRTMKAEPAQGDEWV-EQDETGVYITLVALPGGLKDLKRVRFSRKKFSEK 984
            S   +   +    +K    +G++ V EQ E GVY TLV LP G K  KR+RFS+++F+E+
Sbjct: 1021 SGNGSKLHDSGIPVK----EGEKSVIEQFEHGVYGTLVVLPSGYKVFKRIRFSKRRFNEQ 1076

Query: 985  QAEQWWAANRARVYQQYN 1002
            QAE+WW  N+ +V  +Y+
Sbjct: 1077 QAEEWWNQNKDKVLSKYS 1094



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 51/68 (75%), Gaps = 3/68 (4%)

Query: 6   IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISR-SHYRKGRAES 62
           +F+RY RPEK+Y SFSLIY   +RSLDLICKD+ E EVWF+ LKALISR    R+G+++ 
Sbjct: 121 VFRRYLRPEKDYLSFSLIYKKGERSLDLICKDQAEVEVWFSSLKALISRGERIRRGKSDL 180

Query: 63  RSDEVSSV 70
            ++ V  +
Sbjct: 181 SNESVDLI 188


>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1086

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/1050 (40%), Positives = 599/1050 (57%), Gaps = 113/1050 (10%)

Query: 7    FQRYPRPEKEYQSFSLIY--NDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            FQR  +P+KE+QSFSLIY   +RSLDLICKDK +A+ WF GL+A+ISR H          
Sbjct: 84   FQRQLQPDKEHQSFSLIYAKGERSLDLICKDKAQADSWFIGLRAVISRCHR--------- 134

Query: 65   DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYE-------SPPKNVLD 117
               S   T+ R+H    S ++SP  +G   +K  L  L     +        SP  ++ +
Sbjct: 135  ---SRPLTALRSHRSAQSCVNSP--AGYFRRKHNLGILEDDKEFSQVRSLCGSPTPSLSE 189

Query: 118  KA-------------LSDAVLYA-APPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSG 163
            K              LS++ L       +L+P+    G +  L   GSD         + 
Sbjct: 190  KCFSDGLSLSSDSFCLSESSLQMHNAVDILVPNSPCVGPI--LEKCGSD--------YAC 239

Query: 164  DTFRVSLSSAVSSSSQGSGH-DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF 222
              F+  +S    + + G       DSL DV +WGE    G +GG + R G+ + +++D+ 
Sbjct: 240  SKFQKDMSFRFVTPAYGCTQIGKNDSLKDVLMWGEGVEGGNIGGMVQRLGNQSVMQVDAL 299

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
            VPK +ES  +LDV++I+ G +HAAL+TK+GEVF WG+   G+LGH V+ DV  PK++++L
Sbjct: 300  VPKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGMPKVVESL 359

Query: 283  KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
             +++++ V CGE+ TCA+T SG++YTWG +     L       S WLP KL GPL+GI +
Sbjct: 360  DDVHIKSVVCGEYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGITI 419

Query: 343  SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
            S V+CG WHTA+V+ +GQLFT+GDGTFGVLGHG   SVS P+EV SL+GL     ACG W
Sbjct: 420  SKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSW 479

Query: 403  HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
            HTAA+V++ +      N   GKLFTWGDGD+GRLGH D E +LVPTCVA LV+ +F +VS
Sbjct: 480  HTAAIVDI-IADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKLVDYDFIRVS 538

Query: 463  CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
            CG  LTVALT TG VYTMGS V+GQLG+P+A  K  T VEGKL + FV+EI+ G YHVAV
Sbjct: 539  CGRMLTVALTNTGKVYTMGSSVHGQLGNPQAKDKSITIVEGKLKEEFVKEISSGSYHVAV 598

Query: 523  LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVS 582
            LTS   VYTWGKG NG+LG G+ +DRN P+ VEAL+D++V+SI CG++ TAAICLHK +S
Sbjct: 599  LTSGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESIACGSNLTAAICLHKSIS 658

Query: 583  GVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFG 642
              DQS CSGCR+PF   RK+HNCYNCGL++CH+CSSKK + AS+APN +KP RVCD+C  
Sbjct: 659  VTDQSSCSGCRMPFGLTRKKHNCYNCGLLFCHSCSSKKVINASLAPNKSKPSRVCDSCLN 718

Query: 643  KLTKATETSSSS----HSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVES 698
             L K T +   S    H +           NE    GE     SH +  +  +S  +   
Sbjct: 719  HLQKVTLSGRMSKPGTHGSKQLLCPNKVLANEKEGKGEATPPGSHTR--SVSQSYNQDSP 776

Query: 699  GSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRAT 758
             S ++ +K +      +   + +S G       S   VF S   ++S +         + 
Sbjct: 777  VSQRKTQKDQGEHQHHVETVSSLSAGLPRWGQVSCPVVFES---YYSKN---------SF 824

Query: 759  SPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSEEVI----KLRAQVEELTRKSQLQ 814
             P   +S+   A              I++DD    S  ++    +L AQV  L  + +++
Sbjct: 825  LPVESKSTDSNA--------------ILIDDGMLESNMMLSSVQRLEAQVRNLEMQCEIR 870

Query: 815  EIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFH-- 872
            + +++     ++   ++A EE AK +AA ++IK+LT++L+ M+E +  G           
Sbjct: 871  DQKIQECRETIERTWSLAREEAAKRKAANEIIKALTSRLRAMSEKISAGRKTKGGVELSV 930

Query: 873  SSPTPAW-DVSSAAIEQPSSPLTFQGAIPN------------GSNSLILSNGSDFGDNRS 919
            S  TPA+ D+ S  +  P + L      P              S+ ++ SN     D+R 
Sbjct: 931  SQNTPAYKDIIS--LVSPRATLASVHLPPEVNLPKDRQLDSLSSSPIVFSNTLKSMDSRG 988

Query: 920  PSQTEASHCEATTKNKNRTMKAEPAQGD------EWVEQDETGVYITLVALPGGLKDLKR 973
                   H     +N ++T +A+  Q        EWVEQ E GVYIT   LPGG K LKR
Sbjct: 989  -----LCHEIGRLENDSQTPRADSKQNGTKGSRLEWVEQYEPGVYITFTVLPGGEKGLKR 1043

Query: 974  VRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            VRFSRK+F+EK+AE+WW  N+  VYQ+Y +
Sbjct: 1044 VRFSRKRFAEKEAERWWEENQVTVYQKYGI 1073


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/664 (53%), Positives = 460/664 (69%), Gaps = 54/664 (8%)

Query: 6   IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
           +F R+  PEK+Y SFSLI+ +  RSLDL+CKD+ E EVWF+ L+ LIS S  +K      
Sbjct: 67  VFGRFLHPEKDYLSFSLIFKNGQRSLDLVCKDQAEVEVWFSALEGLIS-SFRKKSLINEH 125

Query: 64  SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
            D VS                   F    +  +D         SY+S     LD A + +
Sbjct: 126 KDRVS-------------------FSEEVTYYQD-------RHSYDS----TLDIASNIS 155

Query: 124 VLYAAPPKVLLPSESACGSVNSLSSGGSD---GRTGHLKGLSGDTFRVSLSSAVSSSSQG 180
             +         S   CG+ NS S   SD    R   ++  + D+ RVS+SSA+SS SQG
Sbjct: 156 RSFN--------SAGYCGT-NSFSFRKSDVGFDRLNMIRTSAADSSRVSISSALSSYSQG 206

Query: 181 SGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
           SG DD +SLGDV++WGE   D     G H S S +  K+D  +PK +ES VVLDV  IAC
Sbjct: 207 SGTDDIESLGDVYVWGEVWTDVTPSDG-HTSSSCS--KVDVLIPKPLESDVVLDVNQIAC 263

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           G RH AL T+QGEVF+WGEE GGRLGHG D+D+S PKL+++L    V+L++CGE HTCAV
Sbjct: 264 GTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAV 323

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           T SGD++ WG  + N GLLG G E+S WLPKK++GPLEG+ V SV+CG WH+A+ TS+G+
Sbjct: 324 TTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGK 383

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           L+TFGDGTFGVLGHGDR +++ P+EV++L G +T++ ACG+WH+AA+VEV   + + +N 
Sbjct: 384 LYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVT--NQTGANV 441

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            S KL+TWGDGD+ RLGHGDKE RLVP CV AL+E NF Q++CGH++TVAL T+G V+TM
Sbjct: 442 MSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALATSGRVFTM 501

Query: 481 GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
           GS   GQLG+PK++GK P  V+ +L    VEEI+CG  HV VLTSR+EVYTWG GANGRL
Sbjct: 502 GSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRL 561

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKR 600
           GHGD  DR  P LVEALKD+ VKSI CG++FT  IC+HKWVSG DQS+C+GCR  F F R
Sbjct: 562 GHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCTGCRQAFGFTR 621

Query: 601 KRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATET---SSSSHST 657
           KRH+CYNCGLV+CH CSS+K +KA++AP P KP+RVCD+CF KL KA ET   +S+  + 
Sbjct: 622 KRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKL-KAAETGSNNSNRRNA 680

Query: 658 VSRR 661
           V+RR
Sbjct: 681 VTRR 684



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 36/236 (15%)

Query: 803  QVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPV 862
            +V+ L +K + Q  +L+ + ++ K  +++A EE  +C A  + +K L  +L  +   LP 
Sbjct: 713  EVDSLKQKCEAQHEQLQISDKKTKTVVSMATEEYTRCSAVVEFVKFLDNELNGIVHELPS 772

Query: 863  GAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGS----DFGDNR 918
             A  +  +  +       V +   EQ S P       P   + + LS+G     DF ++R
Sbjct: 773  DAAESLKALQNQ------VQALLREQRSHPSELLN--PMDHDGIQLSSGGNALHDFSNHR 824

Query: 919  SPS---------------------QTEASH--CEATTKNKNRTMKAEPAQGD-EWVEQDE 954
            S S                         SH   E   K  N  +      G+ + +EQ E
Sbjct: 825  SGSTRYLFMSQDASSASGSAISLTSEPPSHRGMEHHAKVPNDFVPKHDTHGEVQLIEQFE 884

Query: 955  TGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSS 1010
             GVY+TL+ L  G K  KRVRFS+KKF+E QAE+WW  N+ RV+++Y+   V +++
Sbjct: 885  PGVYVTLIQLKDGSKVFKRVRFSKKKFAENQAEEWWRENQERVFKKYSHPTVPQTT 940


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/905 (44%), Positives = 552/905 (60%), Gaps = 69/905 (7%)

Query: 6   IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
           +F+RYP+P KEYQSFSLIY +RSLDL   DKDEAE W T L+AL+SR++       SRS 
Sbjct: 80  VFRRYPQPTKEYQSFSLIYGERSLDL---DKDEAEFWLTTLRALLSRNNSSALVLHSRSR 136

Query: 66  EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNV---------- 115
            ++              P +    S   + K  +  +   TSYE   K            
Sbjct: 137 SLA--------------PENGEQSSSSQNSKSNIRSVSSDTSYEEHAKKASGSHCNTPQR 182

Query: 116 LDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVS 175
           L K  S+ +   A  K L   E       S      +  T H      DT + S+SSAVS
Sbjct: 183 LGKVFSEVLSQTAVLKALSLDELVHKPHTSPPETIENRPTNH-SSPGVDTSKYSISSAVS 241

Query: 176 SSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDV 235
           SSSQGS  +D  SL DVF+WGE  GDG+LGGG+H+SGS + +  DSF+PK ++S V LD 
Sbjct: 242 SSSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDA 301

Query: 236 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
           Q+I+CG  +A LVTKQG+++SWGEE GGRLGHGV S V HPKLID      VEL  CGE 
Sbjct: 302 QSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEF 361

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           HTCAVT SGD+Y WG  + N GLLG G+  S W P ++ G +EGI+V ++SCGPWHTA V
Sbjct: 362 HTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFV 421

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           TS G+LFTFGDGTFG LGHGDRIS + PREV++L G RT++AACGVWH+AAVV V   ++
Sbjct: 422 TSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEAT 481

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                SSGKLFTWGDGD GRLGHGD E RL+P+CV  L   +F QV+CG S+TVAL+ +G
Sbjct: 482 -----SSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSG 536

Query: 476 HVYTMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            VY MG+       DP  +  + P+ +EG L K+FV+E+ACG +H+AVL S+ EVYTWGK
Sbjct: 537 QVYAMGT------ADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGK 590

Query: 535 GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRI 594
           G+NG+LGHGDT+ R  P+LV+ALK KQV+ +VCG+++TA ICLHK ++G D + CSGCR 
Sbjct: 591 GSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGCRH 650

Query: 595 PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKL-----TKATE 649
           PFN+ RK HNCYNCG V+C++C+SKKS+ A+MAP  N+PYRVCD+C+ KL     + AT 
Sbjct: 651 PFNYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRESLATP 710

Query: 650 TSSSSHSTVSRRGSMN--------QGFNEAVEHGENFVSRSHVQFGTSMESL--KKVESG 699
            +S+  S  S   S          Q     V+  + F    H    T  E+       S 
Sbjct: 711 ANSARFSNASLPSSYEMDEIGITPQRQLLRVDSFDFFRQTKHADLKTIGETSGGSCTSSI 770

Query: 700 SSKRNKKQEFNRTRGLPLPNGVSQGNALN--------NSKSSNPVFGSTKKFFSASLPGS 751
            S  + K  FN  +G+   + ++  +++         +  S +      +   +  LP S
Sbjct: 771 HSNMDIKGSFN-LKGIRRLSRLTSFDSVQEEGKQRTKHCASKSDTSSLIRHSVTCGLPFS 829

Query: 752 RIMSRATSPTSRRSSPPRATTPTPTL-SGLASPKIVVDDAKRT----SEEVIKLRAQVEE 806
           R  S    P S +SSP  +   T    + +   +++ +  K++    S E+  L+AQVEE
Sbjct: 830 RRGSVELFPLSIKSSPVESVATTSDFTTDITDHELLQEVPKKSNQCLSHEISVLKAQVEE 889

Query: 807 LTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR 866
           LT KS+  E EL +T+++L+ A+ +A ++  K ++++++++SLT QL +  +       R
Sbjct: 890 LTLKSKKLETELGKTSKKLEVAVLMARDDAEKIKSSEEIVRSLTLQLMNTTKKEVDKTRR 949

Query: 867 NSNSF 871
           + NSF
Sbjct: 950 HRNSF 954


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/905 (44%), Positives = 552/905 (60%), Gaps = 69/905 (7%)

Query: 6   IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
           +F+RYP+P KEYQSFSLIY +RSLDL   DKDEAE W T L+AL+SR++       SRS 
Sbjct: 77  VFRRYPQPTKEYQSFSLIYGERSLDL---DKDEAEFWLTTLRALLSRNNSSALVLHSRSR 133

Query: 66  EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNV---------- 115
            ++              P +    S   + K  +  +   TSYE   K            
Sbjct: 134 SLA--------------PENGEQSSSSQNSKSNIRSVSSDTSYEEHAKKASGSHCNTPQR 179

Query: 116 LDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVS 175
           L K  S+ +   A  K L   E       S      +  T H      DT + S+SSAVS
Sbjct: 180 LGKVFSEVLSQTAVLKALSLDELVHKPHTSPPETIENRPTNH-SSPGVDTSKYSISSAVS 238

Query: 176 SSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDV 235
           SSSQGS  +D  SL DVF+WGE  GDG+LGGG+H+SGS + +  DSF+PK ++S V LD 
Sbjct: 239 SSSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDA 298

Query: 236 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
           Q+I+CG  +A LVTKQG+++SWGEE GGRLGHGV S V HPKLID      VEL  CGE 
Sbjct: 299 QSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEF 358

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           HTCAVT SGD+Y WG  + N GLLG G+  S W P ++ G +EGI+V ++SCGPWHTA V
Sbjct: 359 HTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFV 418

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           TS G+LFTFGDGTFG LGHGDRIS + PREV++L G RT++AACGVWH+AAVV V   ++
Sbjct: 419 TSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEAT 478

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                SSGKLFTWGDGD GRLGHGD E RL+P+CV  L   +F QV+CG S+TVAL+ +G
Sbjct: 479 -----SSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSG 533

Query: 476 HVYTMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            VY MG+       DP  +  + P+ +EG L K+FV+E+ACG +H+AVL S+ EVYTWGK
Sbjct: 534 QVYAMGT------ADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGK 587

Query: 535 GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRI 594
           G+NG+LGHGDT+ R  P+LV+ALK KQV+ +VCG+++TA ICLHK ++G D + CSGCR 
Sbjct: 588 GSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGCRH 647

Query: 595 PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKL-----TKATE 649
           PFN+ RK HNCYNCG V+C++C+SKKS+ A+MAP  N+PYRVCD+C+ KL     + AT 
Sbjct: 648 PFNYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRESLATP 707

Query: 650 TSSSSHSTVSRRGSMN--------QGFNEAVEHGENFVSRSHVQFGTSMESL--KKVESG 699
            +S+  S  S   S          Q     V+  + F    H    T  E+       S 
Sbjct: 708 ANSARFSNASLPSSYEMDEIGITPQRQLLRVDSFDFFRQTKHADLKTIGETSGGSCTSSI 767

Query: 700 SSKRNKKQEFNRTRGLPLPNGVSQGNALN--------NSKSSNPVFGSTKKFFSASLPGS 751
            S  + K  FN  +G+   + ++  +++         +  S +      +   +  LP S
Sbjct: 768 HSNMDIKGSFN-LKGIRRLSRLTSFDSVQEEGKQRTKHCASKSDTSSLIRHSVTCGLPFS 826

Query: 752 RIMSRATSPTSRRSSPPRATTPTPTL-SGLASPKIVVDDAKRT----SEEVIKLRAQVEE 806
           R  S    P S +SSP  +   T    + +   +++ +  K++    S E+  L+AQVEE
Sbjct: 827 RRGSVELFPLSIKSSPVESVATTSDFTTDITDHELLQEVPKKSNQCLSHEISVLKAQVEE 886

Query: 807 LTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR 866
           LT KS+  E EL +T+++L+ A+ +A ++  K ++++++++SLT QL +  +       R
Sbjct: 887 LTLKSKKLETELGKTSKKLEVAVLMARDDAEKIKSSEEIVRSLTLQLMNTTKKEVDKTRR 946

Query: 867 NSNSF 871
           + NSF
Sbjct: 947 HRNSF 951


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/660 (53%), Positives = 462/660 (70%), Gaps = 31/660 (4%)

Query: 157 HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGG---IHRSGS 213
           H +G S D  R S+SSA S+SS GS  DD DSLGDV++WGE   +  +  G   I RS  
Sbjct: 2   HTRGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSVRVGSDTIIRSTE 61

Query: 214 YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
               K D  +PK +ES +VLDV ++ CG RHAALVT+ G+VF+WGE+ GGRLGHG   D 
Sbjct: 62  ----KTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            HP+L+++L   NV+ VACGE HTCAVT +G++YTWG    N GLLGHG +   W+PK++
Sbjct: 118 VHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRI 177

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 393
           +G L+G+ V+ VSCG WHTA++TS GQLFTFGDG+FGVLGHG+  S+S P+EV+SL GL+
Sbjct: 178 SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLK 237

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
           T+  ACGVWHTAA+VEV+V  SSSS  S+GKLFTWGDGD+ RLGHGDKE+RL PTCVA+L
Sbjct: 238 TIAVACGVWHTAAIVEVIVTHSSSS-VSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASL 296

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
           ++ +F +V+CGHSLTV LTT+G V +MG+ VYGQLG+P ++G+LP  VE ++    V ++
Sbjct: 297 IDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQV 356

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           ACG YHVAVLT R+EV+TWGKGANGRLGHGD +DR  P+ VEALKD+ V+ I CG +FTA
Sbjct: 357 ACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTA 416

Query: 574 AICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKP 633
           AICLHKWVSG DQS CS C+ PF F RKRHNCYNCGLV+C+ C+S+K+++A++APNP KP
Sbjct: 417 AICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKP 476

Query: 634 YRVCDNCFGKLTKATETSS--SSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSME 691
           YRVCD+CF KL  A ++ S       VS     + G  +A          S     ++M+
Sbjct: 477 YRVCDSCFLKLKNALDSDSFNKRKDIVSHLAGESNGDTKA----------SKTILSSNMD 526

Query: 692 SLKKVESGSSKRNKKQE---FNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASL 748
            ++ ++S ++++ KK +   F RT   P  + + Q   +  S S++ +  S  +    S 
Sbjct: 527 IIRSLDSKAARQGKKTDALSFLRT---PQVSSLLQLRDIALSGSAD-MNRSVPRAVRTSA 582

Query: 749 PGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQV 804
             S   SRA SP SR+SSPPR+TTP PT  GL+  K   D+  +T+E    E+ +L AQV
Sbjct: 583 VRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQV 642


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/908 (44%), Positives = 551/908 (60%), Gaps = 72/908 (7%)

Query: 6   IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
           +F+RYP+P KEYQSFSLIY +RSLDL   DKDEAE W T L+AL+SR++           
Sbjct: 85  VFRRYPQPTKEYQSFSLIYGERSLDL---DKDEAEFWLTTLRALLSRNN----------- 130

Query: 66  EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNV---------- 115
             SS A    + ++  +P +    S   + K  +  +   TSYE   K            
Sbjct: 131 --SSSALVLHSRSRSFAPENGEQSSTSKNSKSNIRSVSSDTSYEEHAKKASGSHCNTPQR 188

Query: 116 LDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVS 175
           L K  S+ +   A  K L   E       S      +  T H   +  DT + S+SSAVS
Sbjct: 189 LGKVFSEVLSQTAVLKALSLDELVHKPHTSPPEAIENRSTNHSPAV--DTSKYSVSSAVS 246

Query: 176 SSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDV 235
           SSSQGS  +D  SL DVF+WGE  GDG+LGGG+H+SGS + +  DSF+PK ++S V LD 
Sbjct: 247 SSSQGSCFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDA 306

Query: 236 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
           Q+I+CG  +A LVTKQG+++SWGEE GGRLGHGV S V HPKLID      VEL  CGE 
Sbjct: 307 QSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEF 366

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           HTCAVT SGD+Y WG  + N GLLG G+  S W P ++ G +EGI+V ++SCGPWHTA V
Sbjct: 367 HTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFV 426

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           TSAG+LFTFGDGTFG LGHGDRIS + PREV++L G RT+R ACGVWH+AAVV V   +S
Sbjct: 427 TSAGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAVVSVFGEAS 486

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                SSGKLFTWGDGD G+LGHGD  +RL+P  V  L   +F QV+CG S+TVAL+ +G
Sbjct: 487 -----SSGKLFTWGDGDDGKLGHGDIASRLIPLSVTELDTTSFQQVACGQSITVALSMSG 541

Query: 476 HVYTMGSPVYGQLGDPKANG--KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
            VY MG+       DP  +   + P+ +EG L K+FV+E+ACG +H+AVL S+ EVYTWG
Sbjct: 542 QVYAMGT------ADPSQDDVVRAPSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWG 595

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCR 593
           KG+NG+LGHGDT+ R  P+LV+ALK KQV+ +VCG+++TA ICLHK ++G D S CSGCR
Sbjct: 596 KGSNGQLGHGDTEYRRMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSSRCSGCR 655

Query: 594 IPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATET-SS 652
            PFN+ RK HNCYNCG V+C++C+SKKS+ A+MAP  N+PYRVCD+C+ KL    E+  +
Sbjct: 656 HPFNYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRESLGT 715

Query: 653 SSHSTVSRRGSMNQGFNEAVEHGE-------------NFVSRSHV-QFGTSMESLKKVES 698
            ++S      S+    NE  E G              +F  ++ +    T  E+     +
Sbjct: 716 PANSARFSNASLPSSSNEMDEIGTTPQRQLLHRVDSFDFFRQTKIPDLKTIGETSGTSCT 775

Query: 699 GSSKRNK--KQEFNRTRGLPLPNGVSQGNAL--------NNSKSSNPVFGSTKKFFSASL 748
            S+  N   K  FN  +G+   + ++  +++         +  S +      +   +  L
Sbjct: 776 SSTHSNMDIKGSFN-LKGIRRLSRLTSFDSVKEEGKQRSKHCASKSDTSSLIRHSVTCGL 834

Query: 749 PGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKR-----TSEEVIKLRAQ 803
           P SR  S    P S +SSP  +   T   +   +   ++ +  +      S E+  L+AQ
Sbjct: 835 PFSRRGSVELFPLSIKSSPVESVATTSDFTTDITDHDLLQEVPKKSNQCLSHEISVLKAQ 894

Query: 804 VEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVG 863
           VEELT KS+  E EL  T+++L+ A+ +A ++  K ++++++++SLT QL +  +     
Sbjct: 895 VEELTLKSKKLEAELGMTSKKLEVAVLMARDDAEKIKSSEEIVRSLTLQLMNATKKEVDK 954

Query: 864 AVRNSNSF 871
             R  NSF
Sbjct: 955 TRRRRNSF 962


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/1026 (40%), Positives = 564/1026 (54%), Gaps = 109/1026 (10%)

Query: 8    QRYPRPEKEYQSFSLIY--NDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            QR    EKE  SFSLIY   + SLDLICKDK +A  WF GLKA+ISR    K  +  RS 
Sbjct: 83   QRQNETEKECHSFSLIYANGEHSLDLICKDKAQAATWFVGLKAVISRCQQPKAFSSLRSC 142

Query: 66   E-VSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            + V S  +SP    +R   L     +   +Q        +H+   SP  ++ ++  SD +
Sbjct: 143  KGVQSCVSSPSGILRRKKNLGLLDDTSQFTQ--------VHSVCASPTLSLSERCFSDGL 194

Query: 125  LYAAPPKVLLPSESACGSV--NSLSSG-------GSDGRTGHLKGLSGDTFRVSLSSAVS 175
             Y +     + S S+   +  NS+ S         S+ +T   +      ++  LSS  S
Sbjct: 195  SYKSEFYSSVSSLSSIHGMTDNSVPSSPYINPDIHSNIKTSRFE----KEYKKELSSNRS 250

Query: 176  SSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDV 235
                 S     + L DV +WG   G G L G ++    +    + S VPK +ES  +LDV
Sbjct: 251  IMPPASALVGNNVLKDVMVWG--GGIGCLVGIVNER--FVQNSIYSLVPKLLESTAMLDV 306

Query: 236  QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
            QN+A GG HAA+VTKQGEV+ WG+   GRLG  +D D+S PK++D L +I V+ VACGE+
Sbjct: 307  QNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTLSDIRVKNVACGEY 366

Query: 296  HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
            HTCA+T SG++Y WG       L+  G   S WL  KL+ P+EGI +SS++CG WHTA+V
Sbjct: 367  HTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEGISISSIACGEWHTAIV 426

Query: 356  TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            +S G+LFT+GDGTFGVLGHG   S S+P+EV+SLKGL     ACG WHTAA++E+     
Sbjct: 427  SSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEIS-AER 485

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
               N S+GKLFTWGD D GRLGH D   +LVPTCV+ LV+ +F QVSCG  +T+ALT  G
Sbjct: 486  FKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMG 545

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             V+ MGS  YGQLG+P    +    VEG L + +V+ I+CG YHVAVLTS   VYTWGKG
Sbjct: 546  KVFAMGSAKYGQLGNPHVKDR-AVVVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKG 604

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIP 595
             NG LG GDT++R  P  VEAL+D+QV +I CG SFT AICLHK +S  DQS C+GCR+P
Sbjct: 605  ENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAICLHKPISISDQSSCNGCRLP 664

Query: 596  FNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSH 655
            F F RK+HNCYNCGL++C +CSSKK + AS+AP  +K +RVCD+CF +     +  SS H
Sbjct: 665  FGFTRKKHNCYNCGLLFCRSCSSKKVMNASLAPVKSKAFRVCDSCFNR-----KQGSSEH 719

Query: 656  STVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGL 715
              +    S N    +   H +N         G   E              + E N T G 
Sbjct: 720  PAMDSSKSRNYNNQQIQRHHQNMT-------GDVTED-------------RGETNVTNGP 759

Query: 716  PLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTP 775
             L   +SQ     N  S   V+ S +    +S     ++          +      T   
Sbjct: 760  ML--SLSQTCYRKNMPSGRKVWKSQQDLEDSSSKLGNVIQCGQGQVPYSAQFRINCTENS 817

Query: 776  TLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEE 835
             +    + K      K   EEV +LRA+ + L ++ +L+  E++   ++++E+ +VA +E
Sbjct: 818  VVHETETTK----SDKLLMEEVQRLRAEAKRLEKQCELKNQEIQECQQKVEESWSVAKDE 873

Query: 836  TAKCRAAKDVIKSLTAQL-----KD---------MAEMLPVGAVRNSNSFHSSPTPAWDV 881
             AKC+AAK+VIK+L  +L     KD         + E+LP     N    H+      + 
Sbjct: 874  AAKCKAAKEVIKALALRLHTISGKDNHGLEQKAGLQELLP-----NLAPIHTDTNSPRNA 928

Query: 882  SSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKA 941
            +  ++   +SP+ F  A+            S FG +               K  N   KA
Sbjct: 929  NMDSLS--NSPIIFSSALK-----------SKFGRS------------ILLKKDNNLTKA 963

Query: 942  EPAQGD----EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARV 997
            E  Q +    EWVEQ E GVYITL   P G K LKRVRFSRK+FS+K+AE+WW  N+ +V
Sbjct: 964  ESQQENALKVEWVEQYENGVYITLTKSPSGEKGLKRVRFSRKRFSQKEAERWWEENQTKV 1023

Query: 998  YQQYNV 1003
            + +Y +
Sbjct: 1024 HHKYEI 1029


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/1037 (40%), Positives = 571/1037 (55%), Gaps = 128/1037 (12%)

Query: 8    QRYPRPEKEYQSFSLIY--NDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            QR    EKE  SFSLI    +RSLDLICKDK +A  WF  LKA+ISR  + +  +  RS 
Sbjct: 82   QRQNESEKECHSFSLICANGERSLDLICKDKAQAASWFVALKAVISRCQHPRAFSSLRSC 141

Query: 66   E-VSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            + V S  +SP    +R   L     +   +Q        +H+   SP  ++ ++  SD +
Sbjct: 142  KGVQSCVSSPAGILRRKKNLGLLDDTSQFTQ--------VHSVCASPTMSLSERCFSDGL 193

Query: 125  LYAAPPKVLLPSESACGSVNSLSS--GGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSG 182
                       S++   S + LSS  G +D        +  D      S+ +    + + 
Sbjct: 194  S--------CTSDNFYSSASFLSSTHGVTDSSVASSPYIDPDIHGNIESTRIDKEHKKNL 245

Query: 183  HD------------DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESA 230
             D              + L DV IWG   G G L G ++    + G+   S VPK +ES 
Sbjct: 246  SDSYLMHFTTPHVGKSNVLKDVMIWG--GGIGCLVGIVNERFVHPGIY--SLVPKLLEST 301

Query: 231  VVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV 290
             +LDV NIA GG+HAALVTKQGEVF WG+   GRLG  +D D+S PK++D+L  ++V+ V
Sbjct: 302  AMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLNGLHVKTV 361

Query: 291  ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
            ACGE+HTCA+T SG++YTWG   C   LL  G   S W+P++L GPL+GI +SSV+CG W
Sbjct: 362  ACGEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISSVACGEW 421

Query: 351  HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            HTA+V+S G+LFT+GDGTFGVLGHGD  S S+P+EV+SL GLR   AACG WHTAA+VEV
Sbjct: 422  HTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSWHTAAIVEV 481

Query: 411  MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
            M       N +SGKLFTWGDGD GRLGH D   ++VPT V  LV+ +F QVSCG  LTVA
Sbjct: 482  MF-DRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLVDYDFVQVSCGRMLTVA 540

Query: 471  LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
            LT  G V+ MGS  YGQLG+P A  K+   VEG+L + FV+ I+ G YHVAVLTS   VY
Sbjct: 541  LTNMGKVFAMGSAKYGQLGNPHARDKVVI-VEGQLKQEFVKVISTGSYHVAVLTSAGSVY 599

Query: 531  TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCS 590
            TWG+G  G+LG GDT+DR  P  VEAL+D+QV +I CG SFTAAICLHK +S  DQS CS
Sbjct: 600  TWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAICLHKPISISDQSTCS 659

Query: 591  GCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATET 650
            GCR+PF F RK+HNCYNCGL++C  CSSKK   A +AP+ +K +RVCD CF K       
Sbjct: 660  GCRLPFGFTRKKHNCYNCGLLFCRACSSKKITNAPLAPSKSKAFRVCDQCFDK------R 713

Query: 651  SSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFN 710
               +HS ++ + S N    + ++H                            ++K  +  
Sbjct: 714  QGGAHSVMASK-SRNYNTQQVLKH----------------------------QHKISDVT 744

Query: 711  RTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSR--------IMSRATSPTS 762
              RG      V+QG          P+    +  +  S+P  R        I       +S
Sbjct: 745  EDRG---ETTVTQG----------PMLSLGQSCYRKSMPSGRKDWKNHQEIQQDVEDSSS 791

Query: 763  RRSSPPR-ATTPTPTLSGL---ASPKIVVDDAKRTS---EEVIKLRAQVEELTRKSQLQE 815
                 P+    P P +  +    +P +  D  K      EEV +LRA+ + L  + +L+ 
Sbjct: 792  MLGGMPQWGQVPCPAMFQINCTENPVVHTDTTKSDKVLLEEVHRLRAEAKRLEEQCELKN 851

Query: 816  IELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGA---------VR 866
             +++   ++++E+  VA EE AKC+AAK+VIK+L  +L  ++    VG          V 
Sbjct: 852  RKIQECRQKIEESWFVAREEAAKCKAAKEVIKALALRLHTISGKDNVGQEGKVGPNEFVP 911

Query: 867  NSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEAS 926
            N    H+      DVS  ++   +SP+ F   + +     +     +   NR+ SQ +  
Sbjct: 912  NVAPIHTEMKSPRDVSVDSLS--NSPIVFSDTLKSKFGRSLFPKIDNSNINRAESQQD-- 967

Query: 927  HCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQA 986
                   N    +KA      EWVEQ E GVYIT   LP G K LKRVRFSRK+FSEK+A
Sbjct: 968  -------NNIDGLKA------EWVEQYELGVYITFTTLPCGKKGLKRVRFSRKRFSEKEA 1014

Query: 987  EQWWAANRARVYQQYNV 1003
            E+WW  N+  VY +Y +
Sbjct: 1015 EKWWEENQVTVYHKYGI 1031


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/1052 (39%), Positives = 581/1052 (55%), Gaps = 106/1052 (10%)

Query: 9    RYPRPEKEYQSFSLIYND----RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            R  +P+KE QSFSLIY +     SLDLICKD  +A+ WF GL+A+IS+ H+ +     ++
Sbjct: 77   RQLQPDKENQSFSLIYTNGDHSSSLDLICKDNAQADSWFIGLRAVISKCHHSRPFCALKN 136

Query: 65   DEVS-SVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
              V+ S   SP    +R   L           +D  +   +H+ Y SP +++ D+  SD 
Sbjct: 137  HRVAQSCVNSPAGFIRRKHNLGI--------LEDDTELSQVHSLYGSPMQSISDRGFSDG 188

Query: 124  V---------------LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRV 168
            +               L       L+P        N   +G  +G     K +     R+
Sbjct: 189  LSLSSDSLCFSEASLPLLQTVEDFLIPHTPNAEPQNIKKNGSDNGFAEFQKNM---CHRI 245

Query: 169  SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
                 + S+ +    +  D L DV IWGE  G G +G   +  G ++ +++DS +PK +E
Sbjct: 246  -----IGSNHRSQRTEKNDVLKDVLIWGEGAGGGNIGCVSNHFGYHSTLQVDSLLPKLLE 300

Query: 229  SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
              V+LDV+NI+ G  HAAL+TK+GEVF WGE   G+LGH VD DVS P ++++L    V+
Sbjct: 301  PTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLDGFLVK 360

Query: 289  LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
             VACGE+ TCA+T SG+++ WG +     L+      S WLP++++GPL G+ +S+V+CG
Sbjct: 361  FVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGVSISNVACG 420

Query: 349  PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             WHTA V+S+GQLFT+GDGTFGVLGHG+  SVS P+EV+SLKGL     ACG WHTAA+V
Sbjct: 421  DWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVACGSWHTAAIV 480

Query: 409  EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
            +V+       N   GKLFTWGDGD+GRLGH D E +L PTCVA LVE +F QVSCG  LT
Sbjct: 481  DVIF-DRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLT 539

Query: 469  VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            VALT TG +YTMGS V+GQLG+P+A  K    VEGKL + FV+EI+ G YHVA LTS   
Sbjct: 540  VALTRTGKIYTMGSSVHGQLGNPQAKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGS 599

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
            VYTWGKG NG+LG G+ +DRN P+LVEAL+D+QV+SI CG++ TAAICLHK +S  DQS 
Sbjct: 600  VYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNLTAAICLHKSISVSDQSA 659

Query: 589  CSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKAT 648
            C GCR+PF F RK+HNCYNCGL++C  CSSKK + AS+APN +K  RVCD+CF  L   T
Sbjct: 660  CKGCRMPFGFTRKKHNCYNCGLLFCRACSSKKLINASLAPNKSKLCRVCDSCFNSLQNIT 719

Query: 649  ETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGT--SMESLKKVESGSSKRNKK 706
                 S   +S++ +++   +E  E G        +Q  +  S+ES       S  + +K
Sbjct: 720  HPGGGSRKLLSQQKALS---DEKEERGGATPPGHRLQLMSRPSLESQPGERKTSRNQGEK 776

Query: 707  QEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLP-GSRIMSRATSPTSRRS 765
            Q+   T    +P+                         SA LP   ++   A   +  R 
Sbjct: 777  QQHLET----VPS------------------------ISAGLPRWGQVSCPAIFESCYRK 808

Query: 766  SPPRATTPTPTLSGLASPKIVVDDAKRTS-----EEVIKLRAQVEELTRKSQLQEIELER 820
                   P  +    +S  + +++ K  S     EEV +LRAQ + L  + Q    +++ 
Sbjct: 809  DSVHPLEPISS----SSSSLNLEEDKHESNNILVEEVERLRAQAKGLEMQCQTGSQKIQE 864

Query: 821  TTRQLKEALAVAGEETAKCRAAKDVIKSLTAQ----------LKDMAEMLPV--GAVRNS 868
              + +++   +A EE AK +AA  +IK+L  +          L  M++ + V   A    
Sbjct: 865  CQQTIEKTWLLAREEAAKRKAANGIIKALVLRVILFPSAILWLHAMSDKVSVRKAAEDGG 924

Query: 869  NSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSN-------SLILSNGSDFGDNRSPS 921
            + +     P +  +        SPL  +  +P   N        ++ SN     D R   
Sbjct: 925  DPYQPQTRPDYTDTPTVFASTHSPLRVR--LPKDCNVESLSSSPIVFSNSLKSLDGRELC 982

Query: 922  QTEASHCE---ATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSR 978
               +   E    +T +  R  K   A   EWVEQ E GVYIT    PGG K LKRVRFSR
Sbjct: 983  HENSMPGEDLHDSTTDPRR--KGTNASKLEWVEQYEPGVYITFTVSPGGEKGLKRVRFSR 1040

Query: 979  KKFSEKQAEQWWAANRARVYQQYNVSMVDKSS 1010
            K+F+EK+A +WW  N A VYQ Y +   +KS+
Sbjct: 1041 KRFAEKEAGRWWEENEAMVYQHYGIEGYNKSN 1072


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/1030 (40%), Positives = 570/1030 (55%), Gaps = 114/1030 (11%)

Query: 8    QRYPRPEKEYQSFSLIY--NDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            QR    EKE  S SLIY   +  LDLICKDK +A  WF GLKA+ISR    K  +  RS 
Sbjct: 83   QRQNGTEKECHSSSLIYANGEHPLDLICKDKAQAATWFVGLKAVISRCQQPKAFSSLRSC 142

Query: 66   E-VSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            + V    +SP    +R   L            D      +H+   SP  ++ ++  SD +
Sbjct: 143  KGVQGCVSSPSGILRRKKNLGLL--------DDASQFTQVHSVCASPTLSLSERCFSDGL 194

Query: 125  LYAAPPKVLLPSESACGSV--NSLSSG-------GSDGRTGHLKGLSGDTFRVSLSSAVS 175
             Y +       S S+   +  NS+ S         S+ +T   +      ++  LSS  S
Sbjct: 195  SYKSDFYSSASSLSSIHGITDNSVPSSPYINPDIHSNIKTSRFE----KEYKKELSSNRS 250

Query: 176  SSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDV 235
                 S     + L DV IWG   G G L G ++    +    + S VPK +ES  +LDV
Sbjct: 251  IMPPASALVGNNVLKDVMIWG--GGIGCLVGIVNER--FVQNSIYSLVPKLLESTAMLDV 306

Query: 236  QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
            QN+A GG HAA+VTKQGEV+ WG+   GRLG  +D D+S PK++D+L +I V+ VACGE+
Sbjct: 307  QNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVACGEY 366

Query: 296  HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
            HTCA+T SGD+YTWG  +C+  L+  G   S WL  K + P+EGI +SS++CG WHTA+V
Sbjct: 367  HTCALTDSGDVYTWGKDSCS-DLVDEGRIRSQWLTHKFSLPVEGISISSIACGEWHTAIV 425

Query: 356  TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            +S G+LFT+GDGTFGVLGHG+  S S+P+EV+SLKGL     ACG WHTAA++EV     
Sbjct: 426  SSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEVS-AER 484

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
               N S+GKLFTWGD D GRLGH D   +LVPTCV+ LV+ +F QVSCG  +T+ALT  G
Sbjct: 485  FKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMG 544

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             V+ MGS  YGQLG+P    +    VEG L + +V+ I+CG YHVAVLTS   VYTWGKG
Sbjct: 545  KVFAMGSAKYGQLGNPHVKDR-AVVVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKG 603

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIP 595
             NG LG GDT++R  P  VEAL+D+QV +I CG SFT AICLHK +S  DQS C+GCR+P
Sbjct: 604  ENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAICLHKPISISDQSSCNGCRLP 663

Query: 596  FNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSH 655
            F F RK+HNCYNCGL++C +CSSKK + AS+AP  +K +RVC++CF K  K   +  SS 
Sbjct: 664  FGFTRKKHNCYNCGLLFCRSCSSKKVLNASLAPVKSKAFRVCESCFNK--KQGSSERSSM 721

Query: 656  STVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGL 715
             +   R   NQ       H +N +       G +  +   + S S    +K         
Sbjct: 722  DSSKSRNCNNQQIQ---RHHQNMIGDVTEDRGETNVTNGPLLSLSQTCYRKN-------- 770

Query: 716  PLPNGVS----QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRAT 771
             +P+G      Q  +  + + S+   GS  +     +P S       +  S         
Sbjct: 771  -MPSGRKVWKIQHESQRDVEDSSSTLGSVIQCGQGQVPYSAQFRINCTENS-------VV 822

Query: 772  TPTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAV 831
              T T     S K+++++ +R       LRA+ + L ++ +L+  E++   ++++E+ +V
Sbjct: 823  HETETTK---SDKLLIEEVQR-------LRAEAKRLEKQCELKNQEIQECQQKVEESWSV 872

Query: 832  AGEETAKCRAAKDVIKSLTAQL-----KD---------MAEMLPVGAVRNSNSFHSSPTP 877
            A EE AKC+AAK+VIK+L  +L     KD         + E LP     N    H+    
Sbjct: 873  AKEEAAKCKAAKEVIKALALRLHTISGKDNHGLEQKAGLQEFLP-----NLAPIHTDMNS 927

Query: 878  AWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNR 937
              + ++ ++   +SP+ F  A+            S FG +               K  N 
Sbjct: 928  PRNANTDSLS--NSPIIFSSALK-----------SKFGRS------------ILLKKDNN 962

Query: 938  TMKAEPAQGD----EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAAN 993
              KAE  Q +    EWVEQ E GVYITL   P G K LKRVRFSRK+FS+K+AE+WW  N
Sbjct: 963  LTKAESQQENALKVEWVEQYENGVYITLTKSPSGEKGLKRVRFSRKRFSQKEAERWWEEN 1022

Query: 994  RARVYQQYNV 1003
            + +V+ +Y +
Sbjct: 1023 QTKVHHKYEI 1032


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/636 (53%), Positives = 442/636 (69%), Gaps = 50/636 (7%)

Query: 6   IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
           +F R+  PEK+Y SFSLI+ +  RSLDL+CKD+ E EVWF+ L+ LIS S  +K      
Sbjct: 67  VFGRFLHPEKDYLSFSLIFKNGQRSLDLVCKDQAEVEVWFSALEGLIS-SFRKKSLINEH 125

Query: 64  SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
            D VS                   F    +  +D         SY+S     LD A + +
Sbjct: 126 KDRVS-------------------FSEEVTYYQD-------RHSYDS----TLDIASNIS 155

Query: 124 VLYAAPPKVLLPSESACGSVNSLSSGGSD---GRTGHLKGLSGDTFRVSLSSAVSSSSQG 180
           + +         S   CG+ NS S   SD    R   ++  + D+ RVS+SSA+SS SQG
Sbjct: 156 LSFN--------SAGYCGT-NSFSFRKSDVGFDRLNMIRTSAADSSRVSISSALSSYSQG 206

Query: 181 SGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
           SG DD +SLGDV++WGE   D     G H S S +  K+D  +PK +ES VVLDV  IAC
Sbjct: 207 SGTDDIESLGDVYVWGEVWTDVTPSDG-HTSSSCS--KVDVLIPKPLESDVVLDVNQIAC 263

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           G RH AL T+QGEVF+WGEE GGRLGHG D+D+S PKL+++L    V+L++CGE HTCAV
Sbjct: 264 GTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAV 323

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           T SGD++ WG  + N GLLG G E+S WLPKK++GPLEG+ V SV+CG WH+A+ TS+G+
Sbjct: 324 TTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGK 383

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           L+TFGDGTFGVLGHGDR +++ P+EV++L G +T++ ACG+WH+AA+VEV   + + +N 
Sbjct: 384 LYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVT--NQTGANV 441

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            S KL+TWGDGD+ RLGHGDKE RLVP CV AL+E +F Q++CGH++TVAL T+G V+TM
Sbjct: 442 MSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFHQLACGHNMTVALATSGRVFTM 501

Query: 481 GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
           GS   GQLG+PK++GK P  V+ +L    VEEI+CG  HV VLTSR+EVYTWG GANGRL
Sbjct: 502 GSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRL 561

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKR 600
           GHGD  DR  P LVEALKD+ VKSI CG++FT  IC+HKWVSG DQS+C+GCR  F F R
Sbjct: 562 GHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCTGCRQAFGFTR 621

Query: 601 KRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRV 636
           KRH+CYNCGLV+CH CSS+K +KA++AP P KP+R+
Sbjct: 622 KRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRL 657



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 46/63 (73%)

Query: 948  EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVD 1007
            + +EQ E GVY+TL+ L  G K  KRVRFS+KKF+E QAE+WW  N+ RV+++Y+   V 
Sbjct: 772  QLIEQFEPGVYVTLIQLKDGSKVFKRVRFSKKKFAENQAEEWWRENQERVFKKYSHPTVP 831

Query: 1008 KSS 1010
            +++
Sbjct: 832  QTT 834


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/1023 (40%), Positives = 569/1023 (55%), Gaps = 103/1023 (10%)

Query: 8    QRYPRPEKEYQSFSLIY--NDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD 65
            Q+    EKE  SFSLIY   +RSLDLICKDK +A  WF GLKA+ISR  + +  +  RS 
Sbjct: 82   QKQNESEKECHSFSLIYANGERSLDLICKDKAQAASWFVGLKAVISRCQHPRAFSSLRSC 141

Query: 66   E-VSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            + V S A+SP    +R   L     +   +Q        +H+   SP  ++ ++  SD +
Sbjct: 142  KGVQSCASSPAGILRRKKNLGLLDDTSQFTQ--------VHSVCASPTLSLSERCFSDGL 193

Query: 125  ------LYAAPPKVL---------LPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVS 169
                   Y++   +          +PS       N  +   +     H K LS      S
Sbjct: 194  SCTSDNFYSSSSFLSNTHGVTDNSVPSSPYIDPDNHSNIESTRIDKEHKKNLSYRYLMHS 253

Query: 170  LSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVES 229
             S  V  +         + L DV IWG   G G L G ++    +   ++ S VPK +ES
Sbjct: 254  TSPHVGKN---------NVLKDVMIWG--GGIGCLVGIVNER--FVQPRIYSLVPKLLES 300

Query: 230  AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL 289
              +LDV NIA GG+HAAL TKQGEVF WG    GRLG  +D D+S PK++D+L  ++V+ 
Sbjct: 301  TAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKN 360

Query: 290  VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
            VACGE+HTCA+T SG++YTWG   C   LL  G   S W+P+KL G L+GI +SSV+CG 
Sbjct: 361  VACGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGE 420

Query: 350  WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            WHTA+V+S G+LFT+GDGTFGVLGHGD  S S+P+EV+SL GLR   AACG WHTAA+VE
Sbjct: 421  WHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVE 480

Query: 410  VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
            VM       N +SGKLFTWGDGD GRLGH D  ++LVPT V  LV+ +F QVSCG  LTV
Sbjct: 481  VMF-DRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDYDFVQVSCGRMLTV 539

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
            ALT  G V+ MGS  YGQLG+P A  K    VEG+L + FV+ I+ G YHVAVLTS   V
Sbjct: 540  ALTNMGKVFAMGSAKYGQLGNPHARDK-AVMVEGQLKQEFVKVISTGSYHVAVLTSGGSV 598

Query: 530  YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMC 589
            YTWG+G NG+LG GDT+DR  P  VEAL+D+QV +I CG SFTAAI LHK +S  DQS C
Sbjct: 599  YTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAISLHKPISISDQSTC 658

Query: 590  SGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATE 649
            +GCR+PF F RK+HNCY+CGL++C  CSSKK   A +AP+ +K +RVCD CF K    T 
Sbjct: 659  TGCRLPFGFTRKKHNCYSCGLLFCRACSSKKITNAPLAPSKSKAFRVCDQCFDKRQGGTH 718

Query: 650  TSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEF 709
               +S S        N    + ++H       +  +  T++     +  G S   K    
Sbjct: 719  PVMASKSR-------NHNSQQLLKHQHKIADVTEDRGETTVTQGPLLSLGQSCYRKSMPS 771

Query: 710  NRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPR 769
             R       +  S   +  + + S+P+ G   ++     P    ++   +P +   +   
Sbjct: 772  GRK------DWKSNQESQQDVEDSSPMLGGMPQWGQVPCPAIFKINSTENPVAHTDAT-- 823

Query: 770  ATTPTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEAL 829
                        S K+++       EEV +LRA+ + L  + +L+  +++   ++++E+ 
Sbjct: 824  -----------KSDKVLL-------EEVHRLRAEAKRLEEQCELKNHKIQECQQKIEESW 865

Query: 830  AVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGA---------VRNSNSFHSSPTPAWD 880
             VA EE AKC+AAK+VIK+L  +L  ++    VG          V N    H+      D
Sbjct: 866  FVAREEAAKCKAAKEVIKALALRLHTISGKDNVGQEGKAGPNEFVPNVAPIHTEMKSPRD 925

Query: 881  VSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMK 940
            V+  ++   +SP+ F   +            S FG +  P    ++  E+   N +  +K
Sbjct: 926  VNVDSLS--NSPIVFSDTLK-----------SKFGRSLFPKIDNSNRAESQQDNID-GLK 971

Query: 941  AEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQ 1000
            A      EWVEQ E GVYIT   L  G K LKRVRFSRK+FSEK+AE+WW  N+  VY +
Sbjct: 972  A------EWVEQYEPGVYITFTTLQCGKKGLKRVRFSRKRFSEKEAEKWWEENQGTVYHK 1025

Query: 1001 YNV 1003
            Y +
Sbjct: 1026 YGI 1028


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score =  657 bits (1696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/669 (51%), Positives = 440/669 (65%), Gaps = 83/669 (12%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +F+RY RPEK+Y SFSLIY+  DRSLDLICKDK E E+WF GLK+LI     R+ R +  
Sbjct: 912  VFRRYLRPEKDYLSFSLIYHNGDRSLDLICKDKAETEIWFAGLKSLI-----RQNRNKHA 966

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
              E+  +  S    T R S  S  F    + +          TS +   +N   K  S  
Sbjct: 967  KSEIPEIHDSDCFSTGRPSTASIDFAPNNTRRG--------RTSIDLGIQNSPTKFGSSD 1018

Query: 124  VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGH 183
            V Y                             G++   S D FR+S+SS  S S+  SG 
Sbjct: 1019 VGY---------------------------ERGNMLRPSTDGFRISVSSTPSCSTGTSGP 1051

Query: 184  DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
            DD +SLGDV++WGE   DGI   G   + +   VK+D                 IACG R
Sbjct: 1052 DDIESLGDVYVWGEVCSDGISQDG---TVNCRTVKID-----------------IACGVR 1091

Query: 244  HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            H ALVT+QGEVF+WGEE GGRLGHG+  DVS PKL++ L   N++ VACGE+HTCAV+ S
Sbjct: 1092 HIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFVACGEYHTCAVSTS 1151

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            GD++TWG    N GLLGHG+++S W+PK+++GP+EG+ V SV+CG WH+A+ T+ G+LFT
Sbjct: 1152 GDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKLFT 1211

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            FGDG FGVLGHGDR SVS P+EV  L GL+T++ ACGVWHT A+VEVM  + + ++ SS 
Sbjct: 1212 FGDGAFGVLGHGDRESVSYPKEVKMLSGLKTMKVACGVWHTVAIVEVM--NQTGTSMSSK 1269

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            KLFTWGDGD+ RLGHG+KE  L+PTCV++L++ NF Q++CGH+LTVALTT+GHV+TMG  
Sbjct: 1270 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTLTVALTTSGHVFTMGGT 1329

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
             +GQLG   ++GKLP  V+ +L   FVEEI+CGD+HVAVLTSR+EV+TWGKG+NGRLGHG
Sbjct: 1330 SHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHG 1389

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            D +DR  P+LVEALK++ VKSI C                 DQS+CSGCR  F F RKRH
Sbjct: 1390 DKEDRKTPTLVEALKERHVKSISCA----------------DQSVCSGCRQAFGFTRKRH 1433

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCYNCGLV+CH CSSKK++KA++AP P KP+RVCD C+ KL KA E  S  +S V+ R S
Sbjct: 1434 NCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKL-KAGE--SGYNSNVANRNS 1490

Query: 664  MNQGFNEAV 672
              +  + +V
Sbjct: 1491 TTRSLDGSV 1499


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/660 (51%), Positives = 435/660 (65%), Gaps = 82/660 (12%)

Query: 6    IFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
            +F+RY RPEK+Y SFSLIY+  DRSLDLICKDK E EVWF GLK+LI     R+ R +  
Sbjct: 1033 VFRRYLRPEKDYLSFSLIYHNGDRSLDLICKDKAETEVWFAGLKSLI-----RQNRNKQA 1087

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
              E+  +  S    T R S  S  F    + +          TS +   +N   K  S  
Sbjct: 1088 KSEIPEIHDSDCFSTGRPSTASIDFAPNNTRRG--------RTSIDLGIQNSPTKFGSSD 1139

Query: 124  VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGH 183
            V Y                             G++   S D FR+S+SS  S S+  SG 
Sbjct: 1140 VGY---------------------------ERGNMLRPSTDGFRISVSSTPSCSTGTSGP 1172

Query: 184  DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
            DD +SLGDV++WGE   DGI   G+  S +   VK+D                 IACG R
Sbjct: 1173 DDIESLGDVYVWGEVWSDGISPDGVVNSTT---VKID-----------------IACGVR 1212

Query: 244  HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            H ALVT+QGEVF+W EE GGRLGHG+  DV  PKL++ L   N++ VACGE+HTCAV+ S
Sbjct: 1213 HIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVSTS 1272

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            GD++TWG    N GLLGHG+++S W+PK+++GP+EG+ V SV+CG WH+A+ T+ G+LFT
Sbjct: 1273 GDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKLFT 1332

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            FGDG FGVLGHGDR SVS P+EV  L GL+T++ ACGVWHT A+VEVM  + +S+  SS 
Sbjct: 1333 FGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTST--SSR 1390

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            KLFTWGDGD+ RLGHG+KE  L+PTCV++L++ NF Q++CGH+ TVALTT+GHV+TMG  
Sbjct: 1391 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGT 1450

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
             +GQLG   ++GKLP  V+ +L   FVEEI+CGD+HVAVLTSR+EV+TWGKG+NGRLGHG
Sbjct: 1451 SHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHG 1510

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
            D DDR  P+LVEAL+++ VKSI C               G DQS+CSGCR  F F RKRH
Sbjct: 1511 DKDDRKTPTLVEALRERHVKSISC---------------GADQSVCSGCRQAFGFTRKRH 1555

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGS 663
            NCYNCGLV+CH CSSKK++KA++AP P KP+RVCD C+ KL KA E  S  +S V+ R S
Sbjct: 1556 NCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKL-KAGE--SGYNSNVANRNS 1612


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/1018 (39%), Positives = 591/1018 (58%), Gaps = 58/1018 (5%)

Query: 15   KEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDE-VSSVA 71
            K+ +SFSLIY+  +RSL L CKDK +A+ WF GL ++ISR+H+ +     +    + S A
Sbjct: 87   KKLESFSLIYSNCERSLVLTCKDKAQADCWFLGLSSIISRNHHPRPVTILKDQRGIVSCA 146

Query: 72   TSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVLYAAPPK 131
             SP    +R   L           +D  D   + +   SP  ++ ++ LSD + ++    
Sbjct: 147  NSPAGFIRRKYNLGL--------LEDSADFPQVRSLCGSPTLSLSERCLSDGLSHSFDS- 197

Query: 132  VLLPSESAC-GSVNSLSSGGSDGRTGHLKGLSGDTF-RVSLSSAVSSSSQGSGHDDGDSL 189
               PS+    G +++  +  ++    +   L    + + +LS  V+        +  + L
Sbjct: 198  -FYPSDGQSEGDISAWGTPVAEPDVLNRGSLDETIYEKNALSRFVAPVHTSPYIEKNNIL 256

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
             DV IWGE    G++GGG  RS S+ G+ +D+ +PK +ES ++LDVQ+I+ GG+HAAL+T
Sbjct: 257  KDVMIWGEGIEGGLIGGGTERSASHKGMLVDALLPKLLESTMMLDVQSISLGGKHAALIT 316

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            K GE+FSWG+   GRLGH ++ D+ HPKL+D+L  I  + VACGE+ TCA+T +G++YTW
Sbjct: 317  KHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVACGEYQTCALTKAGEVYTW 376

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            G S          N  S WLP+KL+GPL+GI +S+V+CG WHTAVV++ G+LFT+GDGTF
Sbjct: 377  GDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHTAVVSACGRLFTYGDGTF 436

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+ IS+S P+EV+SL GL     ACG WHTAA+V++M+      + + GKLFTWG
Sbjct: 437  GALGHGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDIMIDRFKFKS-AVGKLFTWG 495

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            DGD+G+LGHGD E +L+PTCVA LV+ +F QVSCG  LTV LT  G VYTMGS ++GQLG
Sbjct: 496  DGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLG 555

Query: 490  DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
            +  +       VEGKL + FV+ I+ G YHVA LTS   VYTWGKGA+G+LG GD+DDRN
Sbjct: 556  NLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRN 615

Query: 550  FPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCG 609
             P+ VEAL DKQV+SI CG++FTAAICLH+ ++  DQS C GC++PF F RK+HNCY+CG
Sbjct: 616  LPTFVEALGDKQVESIACGSNFTAAICLHRSITSSDQSSCYGCKLPFGFTRKKHNCYHCG 675

Query: 610  LVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFN 669
            L +C  CSSKK+  A++APN +K +RVCD CF  L +      S     +R  + N    
Sbjct: 676  LYFCRMCSSKKTTNAALAPNKSKAFRVCDPCFNILRRHIHLDRSLKQENTR--TQNSLKQ 733

Query: 670  EAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN 729
            + V   E    R       SM S        +K+N  +  +  +   +  G +Q +    
Sbjct: 734  QKVSGFERVDKR-------SMSSKHSPLLSPTKQNIDEMQSHWKF--INQGENQQDLETF 784

Query: 730  SKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP------ 783
            + S  P +G        S P S  M    + T    SP +  T    L  L SP      
Sbjct: 785  TSSGIPSWGQV------SCPASFKMCDREN-TKTLFSPSQNQTTANDLVHLKSPNSSAIS 837

Query: 784  --KIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRA 841
              + +   +++ SEEV +LR +V+ L  +    + ++++  ++++EA +VA EE AKC+A
Sbjct: 838  LDRFLYGSSEKLSEEVQRLRTEVKNLELQCNDGDEKMQKCRQKIEEAWSVAREEAAKCKA 897

Query: 842  AKDVIKSLTAQLKDMAEMLPV-GAVR---NSNSFHSSPTPAWDVSSAAIEQPSSPLTFQG 897
            AK++IK+L  +L  ++E +   G  +   ++N  H +P  +   +      PS+      
Sbjct: 898  AKEIIKALALRLHTISEKVSSRGDTKDEVDANKPHVTPVYSDSSNFGHFHSPSAVTCLPP 957

Query: 898  AIPNGSNSLI---LSNGSDFGDNRSPS---QTEASHCEATTKNKNRTMKAEPAQG----- 946
             +    + +I   L N      N   S   +    H   +T       +     G     
Sbjct: 958  ELQLPKDRVIGDSLYNSPIVFSNTFKSLYGRPAFRHVSKSTDPDPIANRTSAKNGNANYL 1017

Query: 947  -DEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
             DEW+EQ E GVYIT  +LPGG K LKRVRFSR++FSE++AE+WW  N+  VYQ+Y +
Sbjct: 1018 KDEWMEQYEAGVYITFTSLPGGHKGLKRVRFSRRRFSEREAERWWEENQVIVYQKYGI 1075


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score =  636 bits (1641), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 398/1010 (39%), Positives = 581/1010 (57%), Gaps = 73/1010 (7%)

Query: 15   KEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDE-VSSVA 71
            K+ +SFSLIY+  +RSL L CKDK +A+ WF GL ++ISR+H+ +     +    + S A
Sbjct: 107  KKLESFSLIYSNCERSLVLTCKDKAQADCWFLGLSSIISRNHHPRPVTILKDQRGIVSCA 166

Query: 72   TSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVLYAAPPK 131
             SP    +R   L           +D  D   + +   SP  ++ ++ LSD + ++    
Sbjct: 167  NSPAGFIRRKYNLGL--------LEDSADFPQVRSLCGSPTLSLSERCLSDGLSHSFDS- 217

Query: 132  VLLPSESAC-GSVNSLSSGGSDGRTGHLKGLSGDTF-RVSLSSAVSSSSQGSGHDDGDSL 189
               PS+    G +++  +  ++    +   L    + + +LS  V+        +  + L
Sbjct: 218  -FYPSDGQSEGDISAWGTPVAEPDVLNRGSLDETIYEKNALSRFVAPVHTSPYIEKNNIL 276

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
             DV IWGE    G++GGG  RS S+ G+ +D+ +PK +ES ++LDVQ+I+ GG+HAAL+T
Sbjct: 277  KDVMIWGEGIEGGLIGGGTERSASHKGMLVDALLPKLLESTMMLDVQSISLGGKHAALIT 336

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            K GE+FSWG+   GRLGH ++ D+ HPKL+D+L  I  + VACGE+ TCA+T +G++YTW
Sbjct: 337  KHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVACGEYQTCALTKAGEVYTW 396

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            G S          N  S WLP+KL+GPL+GI +S+V+CG WHTAVV++ G+LFT+GDGTF
Sbjct: 397  GDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHTAVVSACGRLFTYGDGTF 456

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+ IS+S P+EV+SL GL     ACG WHTAA+V++M+      + + GKLFTWG
Sbjct: 457  GALGHGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDIMIDRFKFKS-AVGKLFTWG 515

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            DGD+G+LGHGD E +L+PTCVA LV+ +F QVSCG  LTV LT  G VYTMGS ++GQLG
Sbjct: 516  DGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLG 575

Query: 490  DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
            +  +       VEGKL + FV+ I+ G YHVA LTS   VYTWGKGA+G+LG GD+DDRN
Sbjct: 576  NLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRN 635

Query: 550  FPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCG 609
             P+ VEAL DKQV+SI CG++FTAAICLH+ ++  DQS C GC++PF F RK+HNCY+CG
Sbjct: 636  LPTFVEALGDKQVESIACGSNFTAAICLHRSITSSDQSSCYGCKLPFGFTRKKHNCYHCG 695

Query: 610  LVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFN 669
            L +C  CSSKK+  A++APN +K +RVCD CF  L                         
Sbjct: 696  LYFCRMCSSKKTTNAALAPNKSKAFRVCDPCFNIL------------------------- 730

Query: 670  EAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN 729
                       R H+    S++        S K+ K   F R     + +  S    L+ 
Sbjct: 731  -----------RRHIHLDRSLKQENTRTQNSLKQQKVSGFERVDKRSMSSKHSP--LLSP 777

Query: 730  SKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDD 789
            +K +     S  KF +    G       T  +S   S  + + P      ++  + +   
Sbjct: 778  TKQNIDEMQSHWKFINQ---GENQQDLETFTSSGIPSWGQVSCPASFKIAISLDRFLYGS 834

Query: 790  AKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSL 849
            +++ SEEV +LR +V+ L  +    + ++++  ++++EA +VA EE AKC+AAK++IK+L
Sbjct: 835  SEKLSEEVQRLRTEVKNLELQCNDGDEKMQKCRQKIEEAWSVAREEAAKCKAAKEIIKAL 894

Query: 850  TAQLKDMAEMLPV-GAVR---NSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNS 905
              +L  ++E +   G  +   ++N  H +P  +   +      PS+       +    + 
Sbjct: 895  ALRLHTISEKVSSRGDTKDEVDANKPHVTPVYSDSSNFGHFHSPSAVTCLPPELQLPKDR 954

Query: 906  LI---LSNGSDFGDNRSPS---QTEASHCEATTKNKNRTMKAEPAQG------DEWVEQD 953
            +I   L N      N   S   +    H   +T       +     G      DEW+EQ 
Sbjct: 955  VIGDSLYNSPIVFSNTFKSLYGRPAFRHVSKSTDPDPIANRTSAKNGNANYLKDEWMEQY 1014

Query: 954  ETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            E GVYIT  +LPGG K LKRVRFSR++FSE++AE+WW  N+  VYQ+Y +
Sbjct: 1015 EAGVYITFTSLPGGHKGLKRVRFSRRRFSEREAERWWEENQVIVYQKYGI 1064


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
            [Brachypodium distachyon]
          Length = 1005

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 376/995 (37%), Positives = 557/995 (55%), Gaps = 97/995 (9%)

Query: 32   ICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDE-VSSVATSPRAHTQRSSPLSSPFGS 90
            ICKD+++ E W+ GL AL+S  +      +S S   ++S  +SP ++ Q+ S L S   +
Sbjct: 77   ICKDREQVECWYLGLTALLSALYSPLLLVDSTSSRRINSCTSSPPSYIQQKSRLFSVHDT 136

Query: 91   GGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGG 150
               +Q        +H+ Y SP   ++   LS + L  + P V  P +     ++      
Sbjct: 137  RKFTQ--------VHSLYGSP--RLIQNKLSKSNLDCSEPFVS-PRQRTWSDLDFYMEKF 185

Query: 151  SDGRTGHLKGLSGDTFRVSLSSAVSSS----------SQGSGHDDG-DSLGDVFIWGECT 199
            +      +K    D   ++++  +             S+GS    G DSL D+F+WG+  
Sbjct: 186  TPEMINRVKNSFQD---LTVADTIKEQGITQMPKLKPSEGSHVAYGTDSLKDIFVWGD-- 240

Query: 200  GDGILGGGIH-RSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 258
               +LG  +  R  S A V +    P+ + S  +LDVQN++CG +HAA+VTKQGEVFSWG
Sbjct: 241  ---VLGSVLDDRDTSKANVSL----PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWG 293

Query: 259  EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGL 318
            +E GGRLGH V   V HPK+I++L   +V+ +A G  HTCA+ +SG+++ WG    + G+
Sbjct: 294  KEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGV 353

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
                 + S W P KL GPLEG+ V  ++CG WHTA+++S+GQLFT+GDGTFGVLGHGD  
Sbjct: 354  WDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTS 413

Query: 379  SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH 438
            SV+ P+EV+SLKGLR    ACG WHTAA+VE++   +  SN  SGKLFTWGD DRG+LGH
Sbjct: 414  SVARPKEVESLKGLRVKAVACGPWHTAAIVEIL--GTVKSNAPSGKLFTWGDADRGKLGH 471

Query: 439  GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLP 498
             DKE++LVPTCV AL + +F QVSC  +LTVALT TG V+T+GS  +GQLG  + +    
Sbjct: 472  SDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSI 531

Query: 499  TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
              VEG L   FV EI+ G  HVAVLT   +V+TWGKG  G+LG G+  DR+ P+LVEAL+
Sbjct: 532  CSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALE 591

Query: 559  DKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSS 618
            DKQV SI CG++FT A+CLH+ +SG DQS+CS CR+ F+F RK+HNCYNCG ++C++CS+
Sbjct: 592  DKQVDSIACGSNFTVAVCLHRSISGKDQSVCSRCRLSFSFARKKHNCYNCGSMFCNSCSN 651

Query: 619  KKSVKASMAPNPNKPYRVCDNCFGKLTKATETSS-SSHSTVSRRGSMNQGFNEAVEHGEN 677
             K  +A++ P+ NK YRVCD CF +L K  E  + SS  T+ +     + F   +     
Sbjct: 652  NKVSRAALGPDRNKRYRVCDACFTQLQKNEECGTVSSRLTIEK----EEAFPTEIRAYTP 707

Query: 678  FVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVF 737
             +SR   +  + ME +                           ++QG    N   + P  
Sbjct: 708  KLSRIFKEANSIMEKM--------------------------ALAQGYHQRNQDLAAPDQ 741

Query: 738  GSTKKFFSASLPGSRIMSRATSP--TSRRSSPPRATTPTPTLSGLASPKIVVDDAKRT-S 794
               +++     P     +R + P  ++ +      + P  +    +S K  +D  ++   
Sbjct: 742  LRIQRWGQVECPSQFRCARNSIPCCSTSKEQTVDESVPAKSAQSASSLKAELDSTEKILL 801

Query: 795  EEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLK 854
            EEV +L+A V  LT + + + ++++   ++++E   +  +E AKC+AAK++IK LT Q  
Sbjct: 802  EEVKQLQAHVTTLTEQCRYRSLKVQLCKQKVEETWLIVRDEAAKCKAAKEIIKVLTNQRN 861

Query: 855  DMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDF 914
             ++  + VG     +S+ S   P    S   I QP      +  +P+  +   +      
Sbjct: 862  ILSRKILVG----KHSYSSETVP----SHMTIGQP-----VKAELPDPPDKHPV-----I 903

Query: 915  GDNRSPSQTEASHCEATTKNKNRTMKAE-------PAQGDEWVEQDETGVYITLVALPGG 967
            G  R  S     H           + AE       P   +  VEQ E GVY+T+V  P G
Sbjct: 904  GKFRRLSSIRDHHRNGRGTYNASNIYAEEADATIPPIDSNGVVEQIERGVYVTIVTSPSG 963

Query: 968  LKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
             K +KR+RFSRK F EK+A++WW AN +RV+++Y+
Sbjct: 964  NKGIKRIRFSRKHFGEKEAQKWWEANESRVFKKYS 998


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 306/502 (60%), Positives = 392/502 (78%), Gaps = 11/502 (2%)

Query: 157 HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGS--- 213
           H KG S D  RVS SSA S+SS GS  DD DS GDV++WGE   D  +     R+GS   
Sbjct: 2   HTKGASSDVIRVSTSSAPSTSSHGSAQDDCDSSGDVYVWGEVICDNSV-----RTGSDTV 56

Query: 214 -YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
             + V+ D   PK +ES +VLD  ++ CG +H+ALVTK GEVF+WGEE GGRLGHG   D
Sbjct: 57  VRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSRED 116

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
             HP+LI++L   NV++VACGE HTCAVT +G++YTWG    N GLLGHG ++S W+PK+
Sbjct: 117 SIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKR 176

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 392
           + G LEG+ V+ VSCG WHTA++T+ GQLFTFGDGTFGVLGHG+R S+S P+EV+SL GL
Sbjct: 177 IAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGL 236

Query: 393 RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA 452
           +T+  ACGVWHTAA+VEV+V + SSS+ SSGKLFTWGDGD+ RLGHGDKE RL PTCVA+
Sbjct: 237 KTISVACGVWHTAAIVEVIV-TQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVAS 295

Query: 453 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE 512
           L++ +F +++CGHSLTV LTT+G V +MG+ VYGQLG+P+++GK+P  VE  + +N V +
Sbjct: 296 LIDYDFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCLVEEIVGENVV-Q 354

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           +ACG YHVAVLT ++EV+TWGKGANGRLGHGD +DR  P+LVEAL+D+ V+ I CG +FT
Sbjct: 355 VACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFT 414

Query: 573 AAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNK 632
           AAIC HKWVSG +QS C+ CR PF F RKRHNC+NCGLV+C+ C+S+K+V+A++APNP K
Sbjct: 415 AAICQHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSRKAVRAALAPNPAK 474

Query: 633 PYRVCDNCFGKLTKATETSSSS 654
           PYRVCD+CF KL  A ++S+ S
Sbjct: 475 PYRVCDSCFLKLNNAVDSSAIS 496


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
            distachyon]
          Length = 1023

 Score =  624 bits (1608), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 393/1003 (39%), Positives = 552/1003 (55%), Gaps = 101/1003 (10%)

Query: 32   ICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDEVSSVATSPRAHTQRSSPLSSPFGSG 91
            IC+D+D+AE W  GL ALIS              +++S   +PR++ QR S LS+   + 
Sbjct: 76   ICRDRDQAECWHLGLTALISAHSPFSSVGSKSGRQITSCTNTPRSYIQRKSKLSAVHDTP 135

Query: 92   GSSQKDGLDPLHLHTSYESP---PKNVLDKAL--SDAVLYAAP--------------PKV 132
               Q        ++ SY SP   PK+     L  S+A+ Y                 PKV
Sbjct: 136  RHKQ--------VYPSYGSPKMTPKDFFGSYLDCSEALFYQRQQTFSDVDSYLEKLNPKV 187

Query: 133  LLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
              P+      +      G+  +T   +  +  TF V  ++              DSL DV
Sbjct: 188  TNPARHGLKDILV----GNKHKTQITQKPNLKTFEVPRAAC-----------RLDSLNDV 232

Query: 193  FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
            F+WG+  G  +    I ++           +P+ V S  +LDVQ+IACG  HAA+VTK G
Sbjct: 233  FLWGDVLGSMLDSEDIPKA-----------LPRLVASTTMLDVQSIACGENHAAIVTKLG 281

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
            EVFSWG E    LGH ++  VS PKL++AL +++V+ VA G  HTCAVT+SG++  W   
Sbjct: 282  EVFSWGNESSRTLGHQINDSVSCPKLVEALASVHVKAVAFGSKHTCAVTVSGELLEWSEG 341

Query: 313  NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
                GLL +  E + W P KL GP++ I VS ++CG WHTA++TS+GQLFT+GDGTFGVL
Sbjct: 342  AHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWHTAIITSSGQLFTYGDGTFGVL 401

Query: 373  GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            GHGD+  ++ P+EV+SLKGLR    ACG WHTAAVVEV   SS + N  SGKLFTWGD D
Sbjct: 402  GHGDKQGIARPKEVESLKGLRVKSVACGPWHTAAVVEVT--SSFNCNAPSGKLFTWGDAD 459

Query: 433  RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            RG+LGH DK+ +LVPTCV  L   +F QVSCG +LTV LT+TG V+T+GS  +GQLG+P 
Sbjct: 460  RGKLGHADKKIKLVPTCVDLLTSYDFLQVSCGAALTVVLTSTGVVFTIGSSKHGQLGNPH 519

Query: 493  ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
            A+G+    VEG L   FV EI+ G  HVAVLT + +V+TWGKGA+G+LG GD D+R+ P+
Sbjct: 520  ADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGDYDNRSSPT 579

Query: 553  LVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVY 612
            LVEAL+ + V+SI CG++F+AA+CLHK +S  DQS+CSGC++ F F RK+H+CYNCG ++
Sbjct: 580  LVEALQGRHVQSIACGSNFSAAVCLHKGMSVKDQSICSGCQMAFGFTRKKHSCYNCGSMF 639

Query: 613  CHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAV 672
            C++CSS K  KA    + N+ YRVCD CF +L K  ++S         +G M   F   +
Sbjct: 640  CNSCSSNKIAKA----DKNRRYRVCDVCFCQLQKVVDSSKFKPQPKISKGDM---FRAEI 692

Query: 673  EHGENFVSRSHVQFGTSMESLKKVESGSSKRNKK-----QEFNRTRGLPLPNG--VSQGN 725
            +     +SR   +    +E +  V+ G +++N       QE  R  G     G  VS   
Sbjct: 693  KAYTPKLSRLFKEANLIVEKMAAVQ-GPNQKNVDSAIPIQEKTRRWGQVECPGQFVSARE 751

Query: 726  ALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKI 785
               +   SN    S    FS  +  S  +    S   RRS+  +    T T + L     
Sbjct: 752  NFKHQPISNNQMHSVS--FSQRMHDSVGLKVGNSL--RRSTDSQKEELTMTETML----- 802

Query: 786  VVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDV 845
                     EEV +LR+QV  L  + Q + +  +   ++L E   +  +E AKC+AAKD+
Sbjct: 803  --------KEEVKQLRSQVTALGEQCQQKNLIAQLYKQRLDETWLLVRDEAAKCKAAKDI 854

Query: 846  IKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTF--QGAIPNGS 903
            IK LT Q   ++E L VG      S +S  TP    +S     PS+ +     G+  + +
Sbjct: 855  IKVLTNQCNALSEKLSVG----QQSGNSKITP----NSVPRRAPSTDVVVPADGSFSHHN 906

Query: 904  NSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEP----AQGDEWVEQDETGVYI 959
             +    +     ++ S +     H     K+       E     A  D  +EQ E GVY 
Sbjct: 907  IARTFDSDGYTTESNSTAAPIDGHQNIARKSDGSGYTTEADSTSAPIDGVIEQIERGVYA 966

Query: 960  TLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
            TL   P G KD++R+RFSRK FSEKQA++WW  N ++VY++Y+
Sbjct: 967  TLAVSPSGQKDIRRMRFSRKHFSEKQAQRWWEENMSKVYEKYS 1009


>gi|296090337|emb|CBI40156.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  622 bits (1605), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 372/653 (56%), Positives = 440/653 (67%), Gaps = 56/653 (8%)

Query: 382  TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
             P+ ++S   L     ACG  H A V +             G++F+WG+   GRLGHG  
Sbjct: 295  VPKPLESAVLLDVQNIACGGRHAALVTK------------QGEVFSWGEESGGRLGHGVD 342

Query: 442  EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY--GQLGDPKANGK--- 496
                 P  + AL   N   V+CG   + A+T +G +YT G   Y  G LG  + N     
Sbjct: 343  SDVSHPKLIDALKNMNIELVACGEYHSCAVTLSGDLYTWGGGSYNFGLLG--RGNDMSHW 400

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
            +P R+ G      V  I+CG +H AV+TS  +++T+G G  G LGHGD      P  VE+
Sbjct: 401  VPKRLIGPSEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDCRSVPIPREVES 460

Query: 557  LKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTC 616
            LK  + + +   TS               Q  C           KRHNCYNCGLV+CH+C
Sbjct: 461  LKGLRTQLLFWETS---------------QKYC----------LKRHNCYNCGLVFCHSC 495

Query: 617  SSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGE 676
            SSKKS+K SMAPNPNKPYRVCDNCF KL KATET SSSHS++SRRGSMNQG NE  E  E
Sbjct: 496  SSKKSLKTSMAPNPNKPYRVCDNCFSKLRKATETDSSSHSSLSRRGSMNQGLNELAEKDE 555

Query: 677  NFVSRSHVQFG--TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSN 734
               SRSHVQ G  +SM+S K+VESG+S+RNKK EFN +R  PLPNG SQ +A NNSKS N
Sbjct: 556  KLDSRSHVQLGKYSSMQSFKQVESGTSRRNKKLEFNSSRVSPLPNGASQWSATNNSKSFN 615

Query: 735  PVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRT- 793
            P F  +KKF SAS+PGSRI SRATSPTSR+SSPPR  TPTP L+GL S KIVV DAK T 
Sbjct: 616  PAFPPSKKFISASVPGSRIASRATSPTSRQSSPPRPATPTPILAGLTSSKIVV-DAKSTN 674

Query: 794  ---SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLT 850
               S+EV+KLRAQVE LTRK+QLQ++ELERT +QLK+A+AVAGEE+AKC+AAK+VIKSLT
Sbjct: 675  DNLSQEVLKLRAQVENLTRKAQLQDVELERTAKQLKDAIAVAGEESAKCKAAKEVIKSLT 734

Query: 851  AQLKDMAEMLPVGAVRNSNS--FHS-SPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLI 907
            AQLKDMAE LPVGAVRNS S  F S SPTP  DVS+ A EQ   P+TF  +   GSN ++
Sbjct: 735  AQLKDMAERLPVGAVRNSKSPPFSSISPTPLSDVSTVATEQICGPITFHESDSMGSNCVV 794

Query: 908  LSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGG 967
            +SNGS    N S S     H EA  +NKN+T  AEP QG EWVEQDE GVYITLV+LPGG
Sbjct: 795  ISNGSSTSSNHS-SYARVGHSEAIIRNKNKT-DAEPYQGVEWVEQDEPGVYITLVSLPGG 852

Query: 968  LKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIGREGLAH 1020
            +KDLKRVRFSRK+FSEKQAEQWWAANR RVYQQYNV +VDKS + IGREGLAH
Sbjct: 853  VKDLKRVRFSRKRFSEKQAEQWWAANRVRVYQQYNVPLVDKSCIGIGREGLAH 905



 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 322/390 (82%), Positives = 345/390 (88%), Gaps = 1/390 (0%)

Query: 5   PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
           PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVW TGLKALISR H++KGR ESRS
Sbjct: 78  PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWLTGLKALISRGHHQKGRTESRS 137

Query: 65  DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
             VSS A SPR HTQRSSPLSSPFGSG S QKDG+DPL LHT YESPPK  L+KALSD +
Sbjct: 138 G-VSSEANSPRTHTQRSSPLSSPFGSGDSMQKDGVDPLRLHTPYESPPKIGLEKALSDVI 196

Query: 125 LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
           LYA PPK   PSES C SV+SLSSGGSDG  G LKG+  D FRVSLSSAVSSSSQGSGHD
Sbjct: 197 LYAVPPKAFFPSESGCNSVHSLSSGGSDGINGRLKGMGVDAFRVSLSSAVSSSSQGSGHD 256

Query: 185 DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
           DGD+LGDVFIWGE TGDG LGGG+ R GS + VKMDSFVPK +ESAV+LDVQNIACGGRH
Sbjct: 257 DGDALGDVFIWGEGTGDGTLGGGVLRVGSSSSVKMDSFVPKPLESAVLLDVQNIACGGRH 316

Query: 245 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
           AALVTKQGEVFSWGEE GGRLGHGVDSDVSHPKLIDALKN+N+ELVACGE+H+CAVTLSG
Sbjct: 317 AALVTKQGEVFSWGEESGGRLGHGVDSDVSHPKLIDALKNMNIELVACGEYHSCAVTLSG 376

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           D+YTWGG + NFGLLG GN+MS W+PK+L GP EGIHVSS+SCGPWHTAVVTSAGQLFTF
Sbjct: 377 DLYTWGGGSYNFGLLGRGNDMSHWVPKRLIGPSEGIHVSSISCGPWHTAVVTSAGQLFTF 436

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
           GDGTFGVLGHGD  SV  PREV+SLKGLRT
Sbjct: 437 GDGTFGVLGHGDCRSVPIPREVESLKGLRT 466



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 26/163 (15%)

Query: 151 SDGRTGHLKGLSGDTFRVSLSSAVSSSSQ-----GSGHDDGDSL-GDVFIWGECTGD-GI 203
           S GR GH  G+  D     L  A+ + +      G  H    +L GD++ WG  + + G+
Sbjct: 333 SGGRLGH--GVDSDVSHPKLIDALKNMNIELVACGEYHSCAVTLSGDLYTWGGGSYNFGL 390

Query: 204 LGGGIHRSGSYAGVKMDSFVPK-AVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG 262
           LG          G  M  +VPK  +  +  + V +I+CG  H A+VT  G++F++G+   
Sbjct: 391 LG---------RGNDMSHWVPKRLIGPSEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 441

Query: 263 GRLGHGVDSDVSHPKLIDALKNINVELV-------ACGEHHTC 298
           G LGHG    V  P+ +++LK +  +L+        C + H C
Sbjct: 442 GVLGHGDCRSVPIPREVESLKGLRTQLLFWETSQKYCLKRHNC 484


>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1005

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 395/1021 (38%), Positives = 564/1021 (55%), Gaps = 115/1021 (11%)

Query: 3    LQPIFQRYPRPEKEYQSFSLIY--NDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRA 60
            + P FQ+  + +++ QSFSLIY   + +LDLICKDK +A+ WF GL+A+I++ H  +  A
Sbjct: 76   ITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKGLRAVITKHHNIRNSA 135

Query: 61   ESRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGL-----DPLHLHTSYESPPKNV 115
              R        TS  A     S ++SP G     Q  GL     D   + +   SP   +
Sbjct: 136  NLR--------TSRGAQ----SCINSPAGFMRRKQNLGLLEETPDLTQIRSLCGSPSTLL 183

Query: 116  LDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVS 175
             ++ LS+ +  ++          A G V+S +    D R    +    +  R S     +
Sbjct: 184  EERCLSNGLSCSSDS---FAESDALGPVSSYNGTDYDFRNSDCERTGTELCRFSSQRFAA 240

Query: 176  S---SSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
            S   S         + L D+ IWG  TG  ++ G  +++        D+  PK +ESA +
Sbjct: 241  SPPPSIITQPITRSNVLKDIMIWGAITG--LIDGSKNQN--------DALSPKLLESATM 290

Query: 233  LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
             DVQ+I+ G +HAALVT+QGEVF WG    G+LG  V+ D+ HPK +++L+++ V  VAC
Sbjct: 291  FDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVAC 350

Query: 293  GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG-IHVSSVSCGPWH 351
             +H TCAVT SG++Y WG         G     S +L +K++  L G + + SV+CG WH
Sbjct: 351  SDHQTCAVTESGELYLWGIDGGTIEQSG-----SQFLTRKISDVLGGSLSIFSVACGAWH 405

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            TA+VTS+GQLFT+G  TFGVLGHG   SV+ P+EV+SL+ ++ +  +CG WHTAA+VE  
Sbjct: 406  TAMVTSSGQLFTYGSRTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETA 465

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
            +     +  S GKLFTWGDGD+GRLGH D + +LVPTCV  L++ +F +VSCG +LTVAL
Sbjct: 466  IDRKFYNAKSCGKLFTWGDGDKGRLGHADNKRKLVPTCVTELIDHDFIKVSCGWTLTVAL 525

Query: 472  TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
            + +G VYTMGS ++GQLG P+A  K    V G LT+ FV++IA G +HVAVLTS   VYT
Sbjct: 526  SVSGTVYTMGSSIHGQLGCPRAKDKSINVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYT 585

Query: 532  WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSG 591
            WGKG NG+LG GD  DRN P LVE L D+ V+SI CG + TAAICLHK +S  DQ+ CS 
Sbjct: 586  WGKGTNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLTDQTACSS 645

Query: 592  CRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETS 651
            C+  F F RK+HNCYNCGL++C+ CSSKK+V AS+APN +K  RVCD+CF  L   TE S
Sbjct: 646  CKSAFGFTRKKHNCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHLWSITEFS 705

Query: 652  SSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNR 711
             +  +                   EN   R  +Q  T     ++V   S    +K+  N+
Sbjct: 706  RNVKT-------------------ENHTPR--MQLVT-----RRV---SEDWTEKEAENQ 736

Query: 712  TRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRAT 771
             + +P  N  S G       S   +F   K  FS S P +       S ++RR S  + +
Sbjct: 737  MQNVPQANRFSDGQPRWGQVSVPSLFHFDK--FSTSSPIN------LSVSARRPSSTKIS 788

Query: 772  TPTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAV 831
            T +       S KI++       EE+ +L+A++  L ++ +L   ++E   ++L +   V
Sbjct: 789  TSS------ESNKILI-------EEIERLKAEIRNLQKQCELGNEKMEECQQELDKTWEV 835

Query: 832  AGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFH-SSPTPAWDVS-------- 882
            A EE  K +AAK++IK+L ++L+   E  P    +   + + S  +P +D S        
Sbjct: 836  AKEEAEKSKAAKEIIKALASKLQTNKEK-PSNPPKTGIACNPSQVSPIFDDSMSIPYLTP 894

Query: 883  -SAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKA 941
             + A   P +    +  +   SN    SN     D  SP+ T   + +  T++       
Sbjct: 895  ITTARSHPENKQLVEKCVTKSSNR--ESNIKLLVD-ASPAITRTGYLQNETQDSTA---- 947

Query: 942  EPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 1001
                  E VEQ E GVYIT  ALP G K LKRVRFSRK+FSEK+A+ WW   +  VY +Y
Sbjct: 948  ------EQVEQYEPGVYITFTALPCGQKTLKRVRFSRKRFSEKEAQIWWEEKQVFVYNKY 1001

Query: 1002 N 1002
            +
Sbjct: 1002 D 1002


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 327/728 (44%), Positives = 448/728 (61%), Gaps = 85/728 (11%)

Query: 164 DTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV 223
           D  R S SS  S+SS GS  DD +S GDV+IWGE   DG               K D   
Sbjct: 34  DVIRFSASSTPSNSSGGSEADDIESKGDVYIWGEVFADGFPS------------KTDVLT 81

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+ +ES VVLDV++I  G  H A+V+++G+VF+WGEE GGRLGHG+D D   P L++   
Sbjct: 82  PRLLESTVVLDVRDIVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDKDFGKPHLVEFPD 141

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
            + +++VACGE HT AV+   + +TWG    N GLLGHGNE+S W+PK +NG L+G+ V 
Sbjct: 142 VVTLDIVACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVV 201

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
           SV+CG WH+A+ TS G+LFTFGDGTFGVLGHGD+ SV  P+EV  L GL+TV+ ACGVWH
Sbjct: 202 SVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQESVMYPKEVQLLSGLKTVKVACGVWH 261

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           TAA++EV     S SN SS KLFTWGDGD+ RLGHG+K+  L PT V+ L+E NF Q++C
Sbjct: 262 TAAIIEVAF--QSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQQIAC 319

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
           GH++TVALTT+GHV+TMGS   GQLG+P A GK+PT V+ KL   F+EEI+CG +HVA +
Sbjct: 320 GHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTLVQDKLLGEFIEEISCGAHHVAAV 379

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
           TSR+E+YTWGKG+NGRLGHGDTDDR  P+LV ALKD+ +K+I CG++FT+ +C  K+VSG
Sbjct: 380 TSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISCGSNFTSCVCNQKYVSG 439

Query: 584 VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGK 643
            DQS+C GCR PF   R RHNC NCGLV+CH CSSKK++KA+MAP  +KP+RVCD C+ K
Sbjct: 440 TDQSVCFGCRQPFGLTRIRHNCNNCGLVFCHNCSSKKAIKAAMAPTLDKPHRVCDTCYTK 499

Query: 644 L--------TKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKK 695
           L        +K    +  SH + +    ++QG           +      F ++ E +K 
Sbjct: 500 LKVVDTNDPSKFNGKAVPSHCSTTAYERLDQG----------IIRSKRTLFSSTTEPVKY 549

Query: 696 VESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASL-PGSRIM 754
           +E  + K   + +                                  F  ASL P    +
Sbjct: 550 LEIRNHKPGTEHD-------------------------------CTSFVRASLVPSLLQL 578

Query: 755 SRATSPTSRRSSPPRA--------------TTPTPTLSGLASPKI---VVDDAKRT---- 793
              T P+S  S P  A                 +     L +P+    +V+  +RT    
Sbjct: 579 KDITFPSSLSSIPSVAKPSTPPSSSQSSTSPNRSSPSPPLINPRFSGGIVNSLRRTNDVL 638

Query: 794 SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQL 853
           ++ V  L++Q+  L +KS+++++E+++  ++  EA+A+   E++    AK+ I+S   QL
Sbjct: 639 NQRVSDLQSQIRSLEQKSEMRDVEIQKLQKKATEAIAMVAVESSSHTEAKEFIESTKHQL 698

Query: 854 KDMAEMLP 861
           K+M E LP
Sbjct: 699 KEMTEKLP 706



 Score = 43.9 bits (102), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 35/122 (28%)

Query: 909  SNGS---DFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALP 965
            SNGS     G+  SP  +E S   +T+ + +R  +    Q   + E+ ++GVY  L    
Sbjct: 955  SNGSCEFSVGEEVSPQNSENS---STSLDSSRHERPPETQ---FFEKFQSGVYALLTLRA 1008

Query: 966  GGLKDLKRVRFSR--------------------------KKFSEKQAEQWWAANRARVYQ 999
             G+K  KRV+F                            ++F++ QAE+WW  N+ RV +
Sbjct: 1009 DGIKIFKRVKFRTFGSPQLETKRSKKTAILKDQKCNYNGRRFTDTQAEEWWRQNKGRVLR 1068

Query: 1000 QY 1001
            +Y
Sbjct: 1069 KY 1070


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
            [Brachypodium distachyon]
          Length = 940

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 338/827 (40%), Positives = 486/827 (58%), Gaps = 69/827 (8%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            DSL D+F+WG+  G  +      R  S A V +    P+ + S  +LDVQN++CG +HAA
Sbjct: 165  DSLKDIFVWGDVLGSVL----DDRDTSKANVSL----PRLLNSTQILDVQNVSCGEKHAA 216

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
            +VTKQGEVFSWG+E GGRLGH V   V HPK+I++L   +V+ +A G  HTCA+ +SG++
Sbjct: 217  IVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGEL 276

Query: 307  YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            + WG    + G+     + S W P KL GPLEG+ V  ++CG WHTA+++S+GQLFT+GD
Sbjct: 277  FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 336

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            GTFGVLGHGD  SV+ P+EV+SLKGLR    ACG WHTAA+VE++   +  SN  SGKLF
Sbjct: 337  GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEIL--GTVKSNAPSGKLF 394

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            TWGD DRG+LGH DKE++LVPTCV AL + +F QVSC  +LTVALT TG V+T+GS  +G
Sbjct: 395  TWGDADRGKLGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHG 454

Query: 487  QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            QLG  + +      VEG L   FV EI+ G  HVAVLT   +V+TWGKG  G+LG G+  
Sbjct: 455  QLGSHRLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYV 514

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCY 606
            DR+ P+LVEAL+DKQV SI CG++FT A+CLH+ +SG DQS+CS CR+ F+F RK+HNCY
Sbjct: 515  DRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISGKDQSVCSRCRLSFSFARKKHNCY 574

Query: 607  NCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSS-SSHSTVSRRGSMN 665
            NCG ++C++CS+ K  +A++ P+ NK YRVCD CF +L K  E  + SS  T+ +     
Sbjct: 575  NCGSMFCNSCSNNKVSRAALGPDRNKRYRVCDACFTQLQKNEECGTVSSRLTIEK----E 630

Query: 666  QGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGN 725
            + F   +      +SR   +  + ME +                           ++QG 
Sbjct: 631  EAFPTEIRAYTPKLSRIFKEANSIMEKM--------------------------ALAQGY 664

Query: 726  ALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSP--TSRRSSPPRATTPTPTLSGLASP 783
               N   + P     +++     P     +R + P  ++ +      + P  +    +S 
Sbjct: 665  HQRNQDLAAPDQLRIQRWGQVECPSQFRCARNSIPCCSTSKEQTVDESVPAKSAQSASSL 724

Query: 784  KIVVDDAKRT-SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAA 842
            K  +D  ++   EEV +L+A V  LT + + + ++++   ++++E   +  +E AKC+AA
Sbjct: 725  KAELDSTEKILLEEVKQLQAHVTTLTEQCRYRSLKVQLCKQKVEETWLIVRDEAAKCKAA 784

Query: 843  KDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNG 902
            K++IK LT Q   ++  + VG     +S+ S   P    S   I QP      +  +P+ 
Sbjct: 785  KEIIKVLTNQRNILSRKILVG----KHSYSSETVP----SHMTIGQP-----VKAELPDP 831

Query: 903  SNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAE-------PAQGDEWVEQDET 955
             +   +      G  R  S     H           + AE       P   +  VEQ E 
Sbjct: 832  PDKHPV-----IGKFRRLSSIRDHHRNGRGTYNASNIYAEEADATIPPIDSNGVVEQIER 886

Query: 956  GVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
            GVY+T+V  P G K +KR+RFSRK F EK+A++WW AN +RV+++Y+
Sbjct: 887  GVYVTIVTSPSGNKGIKRIRFSRKHFGEKEAQKWWEANESRVFKKYS 933


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
            finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator of
            chromosome condensation (RCC1) domains and a PF|01363
            FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
            finger domain [Arabidopsis thaliana]
          Length = 1006

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 395/1042 (37%), Positives = 554/1042 (53%), Gaps = 150/1042 (14%)

Query: 3    LQPIFQRYPRPEKEYQSFSLIY--NDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRA 60
            + P FQ+  + +++ QSFSLIY   + +LDLICKDK +A+ WF GL+A+I++ H  +   
Sbjct: 76   ITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKGLRAVITKHHNIRNSV 135

Query: 61   ESRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGL-----DPLHLHTSYESPPKNV 115
              RS   +             S ++SP G     Q  GL     D   + +   SP   +
Sbjct: 136  NHRSSRGAQ------------SCINSPAGFMRRKQNLGLLEETPDVTQIRSLCGSPSTLL 183

Query: 116  LDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTF------RVS 169
             ++ LS+ +  ++          A G V+S      D R       +G         R +
Sbjct: 184  EERCLSNGLSCSSDS---FAESDALGPVSSYYETDYDFRNSDCDRSTGSELCRFSSQRFA 240

Query: 170  LSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVES 229
             S  +S  +Q       + L D+ IWG  TG  ++ G  +++        D+  PK +ES
Sbjct: 241  ASPPLSIITQPVTR--SNVLKDIMIWGAITG--LIDGSKNQN--------DALSPKLLES 288

Query: 230  AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL 289
            A + DVQ+I+ G +HAALVT+QGEVF WG    G+LG  V+ D+ HPK +++L+++ V  
Sbjct: 289  ATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRS 348

Query: 290  VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG-IHVSSVSCG 348
            VAC +H TCAVT SG++Y WG         G     S +L +K++  L G + V SV+CG
Sbjct: 349  VACSDHQTCAVTESGELYLWGIDGGTIEQSG-----SQFLTRKISDVLGGSLTVLSVACG 403

Query: 349  PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             WHTA+VTS+GQLFT+G GTFGVLGHG   SV+ P+EV+SL+ ++ +  +CG WHTAA+V
Sbjct: 404  AWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIV 463

Query: 409  EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
            E        +  S GKLFTWGDGD+GRLGH D + +LVPTCV  L++ +F +VSCG +LT
Sbjct: 464  ETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLT 523

Query: 469  VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            VAL+ +G VYTMGS ++GQLG P+A  K    V G LT+ FV++IA G +HVAVLTS   
Sbjct: 524  VALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGN 583

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
            VYTWGKG NG+LG GD  DRN P LVE L D+ V+SI CG + TAAICLHK +S  DQ+ 
Sbjct: 584  VYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLNDQTA 643

Query: 589  CSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKAT 648
            CS C+  F F R++HNCYNCGL++C+ CSSKK+V AS+APN +K  RVCD+CF  L   T
Sbjct: 644  CSSCKSAFGFTRRKHNCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHLWSIT 703

Query: 649  ETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE 708
            E         SR   M           +N   R  +      E L           +KQ 
Sbjct: 704  E--------FSRNVKM-----------DNHTPRMQMVTRRVSEDL----------TEKQS 734

Query: 709  FNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPP 768
             N  + LP  N  S G       S   +F              R    +TS +   S   
Sbjct: 735  ENEMQNLPQANRSSDGQPRWGQVSGPSLF--------------RFDKISTSSSLNLSVSA 780

Query: 769  RATTPTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEA 828
            R T+ T   +   S KI+       +EE+ +L+A ++ L R+ +L   ++E   ++L + 
Sbjct: 781  RRTSSTKISTSSESNKIL-------TEEIERLKAVIKNLQRQCELGNEKMEECQQELDKT 833

Query: 829  LAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQ 888
              VA EE  K +AAK++IK+L ++L+                             A  E+
Sbjct: 834  WEVAKEEAEKSKAAKEIIKALASKLQ-----------------------------ANKEK 864

Query: 889  PSSPLTFQGAI------PNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNR----- 937
            PS+PL    A       P   +S+ +   +     RS  +T+    +  TK+ NR     
Sbjct: 865  PSNPLKTGIACNPSQVSPIFDDSMSIPYLTPITTARSQHETKQHVEKCVTKSSNRDSNIK 924

Query: 938  -TMKAEPA-------------QGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSE 983
              + A PA                E VEQ E GVYIT  ALP G K LKRVRFSRK+FSE
Sbjct: 925  LLVDASPAITRTGYLQNETQDSSAEQVEQYEPGVYITFTALPCGQKTLKRVRFSRKRFSE 984

Query: 984  KQAEQWWAANRARVYQQYNVSM 1005
            K+A++WW   +  VY +Y+  +
Sbjct: 985  KEAQRWWEEKQVLVYNKYDAEI 1006


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  609 bits (1571), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 366/871 (42%), Positives = 504/871 (57%), Gaps = 91/871 (10%)

Query: 9   RYPRPEKEYQSFSLIYND----RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
           R  +P+KE QSFSLIY +    RSLDLICKDK +A+ WF GL+A+ISR H  +     ++
Sbjct: 77  RQLQPDKENQSFSLIYTNGDRARSLDLICKDKAQADSWFIGLRAVISRCHRSRPICVLKN 136

Query: 65  DE-VSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
                S   SP    +R   L           +D  +   + +   SP +++ D+ +SD 
Sbjct: 137 HRGAQSCVNSPAGFIRRKHNLGI--------LEDDTELSQVRSLSGSPTQSLSDRGISDG 188

Query: 124 VLY---------AAPPKV-----LLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVS 169
           +           ++ P++     LL S        +L   GSD         +   F+ +
Sbjct: 189 LSLSSDSLFFSGSSLPQMQNVEDLLVSYIPNVEPQNLKKNGSD--------TAYSEFQKN 240

Query: 170 LSSAVSSSSQGSGH-DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
               V   + GS   +  D L DV IWGE    G +G   ++ G +   ++D+ +PK +E
Sbjct: 241 TCHRVIGLNHGSPRTEKKDILKDVLIWGEGVEVGNIGCVDNQFGYHNTKQVDALLPKLLE 300

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           S V+LDV NI+ G +HAAL+TK+GEVF WGE   G+LGH VD DVS PK++++L  ++V+
Sbjct: 301 STVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVK 360

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            VACGE+ TCA+T SG++Y WG +     L       S WLP++++GPL G+ + +V+CG
Sbjct: 361 SVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACG 420

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            WHTA+V+S+GQLFT+GDG+FGVLGHG+ +SVS P+EV+SLKGL     ACG WHTAA+V
Sbjct: 421 DWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIV 480

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
           +++V      N   GKLFTWGDGD+GRLGH D E +L+PTCVA LVE +F QVSCG  LT
Sbjct: 481 DIIV-DRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLT 539

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           VALT TG VYTMGS V+GQLG+P A  K    VEGKL + FV+EI+ G YHVA LTS   
Sbjct: 540 VALTNTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGS 599

Query: 529 VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
           +YTWGKG NG+LG G+ +DRNFP+LVEAL+D QV+SI CG++ TAAICLHK +S  DQS 
Sbjct: 600 LYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQSIACGSNLTAAICLHKSISVSDQSA 659

Query: 589 CSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKAT 648
           C GCR+PF F RK+HNCYNCGL++C  CSSKK + AS+APN +KP RVCD+CF  +   T
Sbjct: 660 CKGCRMPFGFTRKKHNCYNCGLLFCRACSSKKVMNASLAPNKSKPSRVCDSCFYSMQNIT 719

Query: 649 ETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE 708
                      R   M+Q   E +  GE    R+                G  +++ +  
Sbjct: 720 HPG-------HRLQLMSQPSLE-IRPGERKTPRNQ---------------GEKQQHLETA 756

Query: 709 FNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPP 768
           F+ + GLP    V           S P       F S  +  S +      P   +SS  
Sbjct: 757 FSISAGLPQWGQV-----------SCPAI-----FESCYIKNSEL------PLESKSSIS 794

Query: 769 RATTPTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEA 828
            +      LS   S K+++++ KR       LRAQ   L  + Q    ++E     +++ 
Sbjct: 795 SSLNLEEELSD--SKKMLIEEVKR-------LRAQARSLEMQCQTGSQKIEECQLTIEKT 845

Query: 829 LAVAGEETAKCRAAKDVIKSLTAQLKDMAEM 859
             +A EE AK +AA ++IK+L  +  D  E+
Sbjct: 846 WFLAREEAAKRKAANEIIKALALRSMDGREL 876



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 53/72 (73%)

Query: 944  AQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            A   EWVEQ E GVYIT   LP GLK LKRVRFSRK+F+EK+AE+WW  N+A VYQ+Y +
Sbjct: 901  ASKHEWVEQYEPGVYITFTILPSGLKGLKRVRFSRKRFAEKEAERWWEENQAIVYQKYGI 960

Query: 1004 SMVDKSSVSIGR 1015
               +KS+ ++ +
Sbjct: 961  EGYNKSNQNLTK 972


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 345/773 (44%), Positives = 477/773 (61%), Gaps = 46/773 (5%)

Query: 163 GDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF 222
           GD FRVS SS  S+SS GS  DD DS   V+IWGE   +G+   GI   G+    K D  
Sbjct: 131 GDGFRVSASSTPSNSSGGSEPDDIDSFHAVYIWGEVLANGVSPDGI---GTQIPSKTDVL 187

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           +PKA+ES V LDV +IA G  H A+ T+QG VF+WG+E GGRLGHG+D D S P L++ L
Sbjct: 188 IPKALESNV-LDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSPVLVEFL 246

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +  N E VACGE+HT A++ S ++YTWG    N GLLGHG+E S W+PK +NGPLEG+ V
Sbjct: 247 EGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKMVNGPLEGLQV 306

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
            S++CG WH+A+ TS G+LFTFGDG FGVLGHGD+ SV  P+EV  L GL+T++ ACGVW
Sbjct: 307 VSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEVQLLTGLKTIKVACGVW 366

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
           HTAA++EV     S SN SS KLFTWGDGD  RLGHG+KE  L PT VA L+E NF QV 
Sbjct: 367 HTAAIIEVAF--QSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVAPLMEYNFHQVE 424

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
           CGH++T+ALTT+GHV+TMG   +GQLG+P + GK+PT V+ KL   FVE+I+CG +HVA+
Sbjct: 425 CGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKIPTLVQDKLLGEFVEKISCGAHHVAI 484

Query: 523 LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVS 582
           LT+++E+YTWG GANGRLGHGD +DR  P+LV ALKD+ +K++ CG++FT+ IC+HKWVS
Sbjct: 485 LTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKDRNIKNVSCGSNFTSCICVHKWVS 544

Query: 583 GVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKA-SMAPNPNKPYRVCDNCF 641
             DQS+ +G R  F   +KRHNC+NCGL     CSSKK++KA ++ P P KP+RVCDNC 
Sbjct: 545 ETDQSIYNGFRQAFGLTKKRHNCHNCGLA----CSSKKTLKATTLTPTPEKPHRVCDNCN 600

Query: 642 GKLTKATETSSSSHSTVSRRGS-MNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGS 700
            KL    +  +S    + R+ +  +   N     G+  +  +        E +K +E  +
Sbjct: 601 VKLKVVNDNGASK---LDRKVTPSHHSINGNERLGQGTIRSTRTLLSPITEPIKYLEIKN 657

Query: 701 SKRNKKQEFNRT---RGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRA 757
           S  N K +F+ T   R   +P+ V   +    S  S+           AS P        
Sbjct: 658 S--NPKNKFDSTSFIRASQVPSHVQLKDIAFPSSLSSSQSVLKSTIPLASPP-------R 708

Query: 758 TSPTSRRSSPPRATTPTPTLSGLASPKI---VVDDAKRT----SEEVIKLRAQVEELTRK 810
           T P    S P    T   + + LASP+    + ++ +RT    ++EV KL+ Q++ L ++
Sbjct: 709 TPPPHTNSGPIFTNTRKQSPTRLASPRYFGSLNNNLRRTNDALNQEVSKLQNQIQSLKQR 768

Query: 811 SQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLT----------AQLKDMAEML 860
           S +Q++E+++  +++ EA+A +  E++     K+  +S             QLK++ E L
Sbjct: 769 SDMQDVEIKKLNKKVVEAIAFSAVESSNHGVTKEFFESTVYQSAFLDLGFIQLKEITEKL 828

Query: 861 PVGAVRNSNSFHSSPTPAWDVSSAAIE-QPSSPLTFQGAIPNGSNSLILSNGS 912
           P   +  S +     T A D     +E + SS    +   PN  +   L+NGS
Sbjct: 829 P-QKIPESKTLRIVLTQAEDFLKGIVESKTSSSSKLESKQPNAPDIPNLNNGS 880



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 42/57 (73%)

Query: 950  VEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMV 1006
            +E+ E GVY+ L+    G K  KRV+FS+++F+E QAE+WW  N++RV ++Y++ +V
Sbjct: 1101 IEKFERGVYVILMLQSDGTKIFKRVKFSKRRFTENQAEEWWNQNKSRVLREYSIRLV 1157


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 382/1031 (37%), Positives = 548/1031 (53%), Gaps = 119/1031 (11%)

Query: 32   ICKDKDEAEVWFTGLKALISRSHYRKGRAESRS-DEVSSVATSPRAHTQRSSPLSSPFGS 90
            IC+D+D+AE WF GL AL S  +     A S+S  +++S A SPR++ QR   LS+   +
Sbjct: 76   ICRDRDQAECWFLGLTALTSSPYSPLPLAGSKSGRQINSCAISPRSYLQRKCRLSAALDT 135

Query: 91   GGSSQKDGLDPLHLHTSYESPPKNVLDKAL-------SDAVLY--------------AAP 129
               +Q        ++ SY SP   ++ K +       S+A+ Y                 
Sbjct: 136  PRHTQ--------VYPSYGSP--KIIQKKIFGGNLDSSEALFYPRHPTFCDIDSYIEKLN 185

Query: 130  PKVLLPSESACGSVNSLSSGGSD-GRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDS 188
            PK+  P +     +   +    +   T  LK   G      L                DS
Sbjct: 186  PKIATPVKHGLKDIMVANRRAQNITHTPKLKTFEGPRVACRL----------------DS 229

Query: 189  LGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            L DVF+WG   G  +    I +S           +P+ V SA +LDVQ+IACG  HAA++
Sbjct: 230  LKDVFLWGSVLGSMLGSEDIPKS-----------LPRLVGSAKMLDVQSIACGENHAAII 278

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            TKQGEV++WG    GRL   V+ + S PK++++L +++V+ VA G  HTCA+T+SG+++ 
Sbjct: 279  TKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFE 338

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG    + GL+      + W P K  GP++ I VS ++CG WHTA++TS+GQLFT+GDGT
Sbjct: 339  WGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGT 398

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            FGVLGHGD   V+ P+EV+SLKG R    ACG WHTAA+VEVM  SS   N  SGKLFTW
Sbjct: 399  FGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVM--SSFKGNAPSGKLFTW 456

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GD DRG+LGH D++ +L+PTCV +L   +  QVSCG ++TV LT TG V+T+GS  +GQL
Sbjct: 457  GDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQL 516

Query: 489  GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
            G+PKA+G+    VEG L   FV EI+ G  HVAVLT   +V+TWGKGA G+LG GD  +R
Sbjct: 517  GNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNR 576

Query: 549  NFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNC 608
            + P+LVEAL+ + V+S+VCG +FTAAICLHK +S  DQS+CS C++ F F RK+HNCYNC
Sbjct: 577  SSPTLVEALEGRDVESVVCGFNFTAAICLHKTMSMKDQSVCSSCQMVFGFTRKKHNCYNC 636

Query: 609  GLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGF 668
            G ++C +C+S K   A++AP+ N+ YRVCD CF +L K  ++S         +G M   F
Sbjct: 637  GSMFCSSCTSNKITMAALAPDTNRRYRVCDACFYQLQKVVDSSKDKSRLKISKGEM---F 693

Query: 669  NEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALN 728
               ++     +SR   +     E +  V+ G+++RN++           P    Q     
Sbjct: 694  KLELKAYTPKLSRLFKEANFFAEKMASVQ-GTNQRNEE-----------PATAVQTKTER 741

Query: 729  NSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRR-----SSPPRATTPTPTLSGLASP 783
              +   P       F SA        S  T P S       S   R        SG++  
Sbjct: 742  WGQVECPAL-----FISAQ------DSFQTQPVSNSEGCAISFSQRMHDSAVLKSGVS-- 788

Query: 784  KIVVDDAKRTSEEVI---------KLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGE 834
             +   DA+R   E++         +L +QV  LT + Q + + ++   ++L +   V  +
Sbjct: 789  -LRFTDAQREEIEMMQTELQGQVKQLHSQVAVLTEQCQQKSVMVQLYKQKLDDTWLVVRD 847

Query: 835  ETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNS-----NSFHSSPTP-------AWDVS 882
            E A+C+AAKD+IK LT Q   ++E L +G +  +     NS    PT          ++ 
Sbjct: 848  EAARCKAAKDIIKVLTDQCNALSEKLSIGQLSENSKITPNSIPMQPTKIELQGNTGRNLV 907

Query: 883  SAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAE 942
            +  + Q ++      +I      + LSN     D     Q  A    +        + A 
Sbjct: 908  TRKLGQLNNTQNHGSSIQTEKECVPLSNAVVPEDVPFSQQNGARKFSSDGYTTEAPLAAP 967

Query: 943  PAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
            P   D   EQ E GVY+T      G KD+KR+RFSRK F EK+A+ WW  N+ RVY  Y 
Sbjct: 968  PT--DSVTEQIEHGVYVTFSTSSCGKKDIKRIRFSRKHFGEKEAQHWWEHNKTRVYDNYK 1025

Query: 1003 VSMVDKSSVSI 1013
            V  +   SV++
Sbjct: 1026 VEQMATPSVTL 1036


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 383/1028 (37%), Positives = 546/1028 (53%), Gaps = 114/1028 (11%)

Query: 32   ICKDKDEAEVWFTGLKALISRSHYRKGRAESRS-DEVSSVATSPRAHTQRSSPLSSPFGS 90
            IC+D+D+AE WF GL AL S  +     A S+S  +++S A SPR++ QR   LS+   +
Sbjct: 76   ICRDRDQAECWFLGLTALTSSPYSPLPLAGSKSGRQINSCAISPRSYLQRKCRLSAALDT 135

Query: 91   GGSSQKDGLDPLHLHTSYESPP--KNVLDKAL--SDAVLY--------------AAPPKV 132
               +Q        ++ SY SP   K +    L  S+A+ Y                 PK+
Sbjct: 136  PRHTQ--------VYPSYGSPKIQKKIFGGNLDSSEALFYPRHPTSCDIDSYIEKLNPKI 187

Query: 133  LLPSESACGSVNSLSSGGSD-GRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGD 191
              P +     +   +    +   T  LK   G      L                DSL D
Sbjct: 188  ATPVKHGLKDIMVANRRAQNITHTPKLKTFEGPRVACRL----------------DSLKD 231

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG   G  +    I +S           +P+ V SA +LDVQ+IACG  HAA++TKQ
Sbjct: 232  VFLWGSVLGSMLGSEDIPKS-----------LPRLVGSAKMLDVQSIACGENHAAIITKQ 280

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            GEV++WG    GRL   V+ + S PK++++L +++V+ VA G  HTCA+T+SG+++ WG 
Sbjct: 281  GEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGE 340

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
               + GL+      + W P K  GP++ I VS ++CG WHTA++TS+GQLFT+GDGTFGV
Sbjct: 341  GAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGV 400

Query: 372  LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
            LGHGD   V+ P+EV+SLKG R    ACG WHTAA+VEVM  SS   N  SGKLFTWGD 
Sbjct: 401  LGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVM--SSFKGNAPSGKLFTWGDA 458

Query: 432  DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
            DRG+LGH D++ +L+PTCV +L   +  QVSCG ++TV LT TG V+T+GS  +GQLG+P
Sbjct: 459  DRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNP 518

Query: 492  KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            KA+G+    VEG L   FV EI+ G  HVAVLT   +V+TWGKGA G+LG GD  +R+ P
Sbjct: 519  KADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSP 578

Query: 552  SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLV 611
            +LVEAL+ + V+S+VCG +FTAAICLHK +S  DQS+CS C++ F F RK HNCYNCG +
Sbjct: 579  TLVEALEGRDVESVVCGFNFTAAICLHKTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSM 638

Query: 612  YCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEA 671
            +C +C+S K   A++AP+ N+ YRVCD CF +L K  ++S         +G M   F   
Sbjct: 639  FCSSCTSNKITMAALAPDTNRRYRVCDACFYQLQKVVDSSKDKSRLKISKGEM---FKLE 695

Query: 672  VEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSK 731
            ++     +SR   +     E +  V+ G+++RN++           P    Q       +
Sbjct: 696  LKAYTPKLSRLFKEANFFAEKMASVQ-GTNQRNEE-----------PATAVQTKTERWGQ 743

Query: 732  SSNPVFGSTKKFFSASLPGSRIMSRATSPTSRR-----SSPPRATTPTPTLSGLASPKIV 786
               P       F SA        S  T P S       S   R        SG++   + 
Sbjct: 744  VECPAL-----FISAQ------DSFQTQPVSNSEGCAISFSQRMHDSAVLKSGVS---LR 789

Query: 787  VDDAKRTSEEVI---------KLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETA 837
              DA+R   E++         +L +QV  LT + Q + + ++   ++L +   V  +E A
Sbjct: 790  FTDAQREEIEMMQTELQGQVKQLHSQVAVLTEQCQQKSVMVQLYKQKLDDTWLVVRDEAA 849

Query: 838  KCRAAKDVIKSLTAQLKDMAEMLPVGAVRNS-----NSFHSSPTP-------AWDVSSAA 885
            +C+AAKD+IK LT Q   ++E L +G +  +     NS    PT          ++ +  
Sbjct: 850  RCKAAKDIIKVLTDQCNALSEKLSIGQLSENSKITPNSIPMQPTKIELQGNTGRNLVTRK 909

Query: 886  IEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQ 945
            + Q ++      +I      + LSN     D     Q  A    +        + A P  
Sbjct: 910  LGQLNNTQNHGSSIQTEKECVPLSNAVVPEDVPFSQQNGARKFSSDGYTTEAPLAAPPT- 968

Query: 946  GDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSM 1005
             D   EQ E GVY+T      G KD+KR+RFSRK F EK+A+ WW  N+ RVY  Y V  
Sbjct: 969  -DSVTEQIEHGVYVTFSTSSCGKKDIKRIRFSRKHFGEKEAQHWWEHNKTRVYDNYKVEQ 1027

Query: 1006 VDKSSVSI 1013
            +   SV++
Sbjct: 1028 MATPSVTL 1035


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 382/1026 (37%), Positives = 544/1026 (53%), Gaps = 114/1026 (11%)

Query: 32   ICKDKDEAEVWFTGLKALISRSHYRKGRAESRS-DEVSSVATSPRAHTQRSSPLSSPFGS 90
            IC+D+D+AE WF GL AL S  +     A S+S  +++S A SPR++ QR   LS+   +
Sbjct: 76   ICRDRDQAECWFLGLTALTSSPYSPLPLAGSKSGRQINSCAISPRSYLQRKCRLSAALDT 135

Query: 91   GGSSQKDGLDPLHLHTSYESPP--KNVLDKAL--SDAVLY--------------AAPPKV 132
               +Q        ++ SY SP   K +    L  S+A+ Y                 PK+
Sbjct: 136  PRHTQ--------VYPSYGSPKIQKKIFGGNLDSSEALFYPRHPTSCDIDSYIEKLNPKI 187

Query: 133  LLPSESACGSVNSLSSGGSD-GRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGD 191
              P +     +   +    +   T  LK   G      L                DSL D
Sbjct: 188  ATPVKHGLKDIMVANRRAQNITHTPKLKTFEGPRVACRL----------------DSLKD 231

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG   G  +    I +S           +P+ V SA +LDVQ+IACG  HAA++TKQ
Sbjct: 232  VFLWGSVLGSMLGSEDIPKS-----------LPRLVGSAKMLDVQSIACGENHAAIITKQ 280

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            GEV++WG    GRL   V+ + S PK++++L +++V+ VA G  HTCA+T+SG+++ WG 
Sbjct: 281  GEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGE 340

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
               + GL+      + W P K  GP++ I VS ++CG WHTA++TS+GQLFT+GDGTFGV
Sbjct: 341  GAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGV 400

Query: 372  LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
            LGHGD   V+ P+EV+SLKG R    ACG WHTAA+VEVM  SS   N  SGKLFTWGD 
Sbjct: 401  LGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVM--SSFKGNAPSGKLFTWGDA 458

Query: 432  DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
            DRG+LGH D++ +L+PTCV +L   +  QVSCG ++TV LT TG V+T+GS  +GQLG+P
Sbjct: 459  DRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNP 518

Query: 492  KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            KA+G+    VEG L   FV EI+ G  HVAVLT   +V+TWGKGA G+LG GD  +R+ P
Sbjct: 519  KADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSP 578

Query: 552  SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLV 611
            +LVEAL+ + V+S+VCG +FTAAICLHK +S  DQS+CS C++ F F RK HNCYNCG +
Sbjct: 579  TLVEALEGRDVESVVCGFNFTAAICLHKTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSM 638

Query: 612  YCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEA 671
            +C +C+S K   A++AP+ N+ YRVCD CF +L K  ++S         +G M   F   
Sbjct: 639  FCSSCTSNKITMAALAPDTNRRYRVCDACFYQLQKVVDSSKDKSRLKISKGEM---FKLE 695

Query: 672  VEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSK 731
            ++     +SR   +     E +  V+ G+++RN++           P    Q       +
Sbjct: 696  LKAYTPKLSRLFKEANFFAEKMASVQ-GTNQRNEE-----------PATAVQTKTERWGQ 743

Query: 732  SSNPVFGSTKKFFSASLPGSRIMSRATSPTSRR-----SSPPRATTPTPTLSGLASPKIV 786
               P       F SA        S  T P S       S   R        SG++   + 
Sbjct: 744  VECPAL-----FISAQ------DSFQTQPVSNSEGCAISFSQRMHDSAVLKSGVS---LR 789

Query: 787  VDDAKRTSEEVI---------KLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETA 837
              DA+R   E++         +L +QV  LT + Q + + ++   ++L +   V  +E A
Sbjct: 790  FTDAQREEIEMMQTELQGQVKQLHSQVAVLTEQCQQKSVMVQLYKQKLDDTWLVVRDEAA 849

Query: 838  KCRAAKDVIKSLTAQLKDMAEMLPVGAVRNS-----NSFHSSPTP-------AWDVSSAA 885
            +C+AAKD+IK LT Q   ++E L +G +  +     NS    PT          ++ +  
Sbjct: 850  RCKAAKDIIKVLTDQCNALSEKLSIGQLSENSKITPNSIPMQPTKIELQGNTGRNLVTRK 909

Query: 886  IEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQ 945
            + Q ++      +I      + LSN     D     Q  A    +        + A P  
Sbjct: 910  LGQLNNTQNHGSSIQTEKECVPLSNAVVPEDVPFSQQNGARKFSSDGYTTEAPLAAPPT- 968

Query: 946  GDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSM 1005
             D   EQ E GVY+T      G KD+KR+RFSRK F EK+A+ WW  N+ RVY  Y V  
Sbjct: 969  -DSVTEQIEHGVYVTFSTSSCGKKDIKRIRFSRKHFGEKEAQHWWEHNKTRVYDNYKVEQ 1027

Query: 1006 VDKSSV 1011
            +   S+
Sbjct: 1028 MATPSI 1033


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 331/833 (39%), Positives = 485/833 (58%), Gaps = 47/833 (5%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            SL D+F+WGE  G+ +  G +    S A V +    P+ + +  ++DVQ++ACG +HAA+
Sbjct: 178  SLKDIFVWGEVPGNVLDHGDV----SKANVSL----PRLLNTTHIIDVQSVACGEKHAAI 229

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VTKQGEVFSWG + GGRLGH V   VS PK+I++L +  V+ +A G  HTCAV++SG++Y
Sbjct: 230  VTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY 289

Query: 308  TWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
             WG G++C  GL G   + S W P KL GPL+GI +  ++CG WHTA+++SAGQ+FT+GD
Sbjct: 290  EWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGD 348

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            GTFGVLGHGD ++V+ P++V+SLKG+R    ACG WHTAA+VE M   +  SN  SGKLF
Sbjct: 349  GTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM--GTVKSNAPSGKLF 406

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            TWGD DRG+LGH DK+ +LVPTCV  L + +F QVSC  + T+ LT TG V+T+GS  +G
Sbjct: 407  TWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHG 466

Query: 487  QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            +LG+P +       +EG L   FV EI+ G  H+AVLT   +V+TWGKG  G+LG GD  
Sbjct: 467  RLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYV 526

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCY 606
            DR++P+LVEAL+DKQV SI CG +FT AICLH+ +S  DQS+CS C++ F F RK+HNCY
Sbjct: 527  DRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQSVCSNCQLTFGFTRKKHNCY 586

Query: 607  NCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQ 666
            NCG ++C++CS+ K  +A++AP+ +K YRVCD CF ++ K  E     HS +  +  + +
Sbjct: 587  NCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKVEE-----HSKLDPQQKIQK 641

Query: 667  GFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNA 726
                 +E   ++  +    F  +   ++K+ S  S         R++ L +P+ V     
Sbjct: 642  DEVCPIE-IRSYTPKLARIFKEANAIMEKMASAQSPH------QRSQNLAVPDHV---RT 691

Query: 727  LNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP--- 783
            L       P   S  +    S+P    +++ T   S          P P  S L S    
Sbjct: 692  LRWGLVECP---SQFRCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSANDS 748

Query: 784  KIVVDDAKRT-SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAA 842
            K  +D  +    EEV +L+ QV  L ++ + + ++++   R+++E   +A +E AKC+AA
Sbjct: 749  KAELDLMENILLEEVKQLQEQVTTLAKQCRQRSLKVQLYKRKVEETWLIAKDEAAKCKAA 808

Query: 843  KDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNG 902
            KD+IK L  Q   +++ L  G   +++    S   +     A +  P     F       
Sbjct: 809  KDIIKVLIDQHDFLSKNLLAGEKLDNSRIMPSHIASAKSLKAELPDPPDKNVFTSEFQQS 868

Query: 903  SNSLILSNGSDFG-DNRSPSQTEASHCEATTKNKNRT------------MKAEPAQGDEW 949
             ++    N      +   PS    +      +N  RT                P   +  
Sbjct: 869  KSNRDHHNSRQVDRECTQPSIASMADYSVMHQNCRRTSNGSTRCTEGTDATTAPTDSNGV 928

Query: 950  VEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
            +EQ E GVY T+V  PGG K +KR+RFSRK F E QA++WW AN + ++ +Y+
Sbjct: 929  IEQIERGVYATVVTSPGGKKCIKRIRFSRKHFGEDQAQKWWEANESMIFGKYS 981


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 331/833 (39%), Positives = 485/833 (58%), Gaps = 47/833 (5%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            SL D+F+WGE  G+ +  G +    S A V +    P+ + +  ++DVQ++ACG +HAA+
Sbjct: 168  SLKDIFVWGEVPGNVLDHGDV----SKANVSL----PRLLNTTHIIDVQSVACGEKHAAI 219

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VTKQGEVFSWG + GGRLGH V   VS PK+I++L +  V+ +A G  HTCAV++SG++Y
Sbjct: 220  VTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY 279

Query: 308  TWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
             WG G++C  GL G   + S W P KL GPL+GI +  ++CG WHTA+++SAGQLF +GD
Sbjct: 280  EWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGD 338

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            GTFGVLGHGD ++V+ P++V+SLKG+R    ACG WHTAA+VE M   +  SN  SGKLF
Sbjct: 339  GTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM--GTVKSNAPSGKLF 396

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            TWGD DRG+LGH DK+ +LVPTCV  L + +F QVSC  + T+ LT TG V+T+GS  +G
Sbjct: 397  TWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHG 456

Query: 487  QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            +LG+P +       +EG L   FV EI+ G  H+AVLT   +V+TWGKG  G+LG GD  
Sbjct: 457  RLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYV 516

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCY 606
            DR++P+LVEAL+DKQV SI CG +FT AICLH+ +S  DQS+CS C++ F F RK+HNCY
Sbjct: 517  DRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQSVCSNCQLTFGFTRKKHNCY 576

Query: 607  NCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQ 666
            NCG ++C++CS+ K  +A++AP+ +K YRVCD CF ++ K  E     H  +  +  + +
Sbjct: 577  NCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKVEE-----HRKLDPQQKIQK 631

Query: 667  GFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNA 726
                 +E   ++  +    F  +   ++K+ S  S         R++ L +P+ V     
Sbjct: 632  DEVCPIE-IRSYTPKLARIFKEANAIMEKMASAQSPH------QRSQNLAVPDHV---RT 681

Query: 727  LNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP--- 783
            L       P   S  +    S+P    +++ T   S          P P  S L S    
Sbjct: 682  LRWGLVECP---SQFRCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSANDS 738

Query: 784  KIVVDDAKRT-SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAA 842
            K  +D  +    EEV +L+ QV  L ++ + + ++++   R+++E   +A +E AKC+AA
Sbjct: 739  KAELDLMENILLEEVKQLQEQVTTLAKQCRQRSLKVQLYKRKVEETWLIAKDEAAKCKAA 798

Query: 843  KDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNG 902
            KD+IK L  Q   +++ L  G   +++    S   +     A +  P     F       
Sbjct: 799  KDIIKVLIDQHDFLSKNLLAGEKLDNSRIMPSHIASAKSLKAELPDPPDKNVFTSEFQQS 858

Query: 903  SNSLILSNGSDFG-DNRSPSQTEASHCEATTKNKNRT------------MKAEPAQGDEW 949
             ++    N      +   PS    ++   T +N  RT                P   +  
Sbjct: 859  KSNRDHHNSRQVDRECTQPSIASMANYSVTHQNCRRTSNGSTRCTEGTDATTAPTDSNGV 918

Query: 950  VEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
            +EQ E GVY T+V  PGG K +KR+RFSRK F E QA++WW AN + ++ +Y+
Sbjct: 919  IEQIERGVYATVVTSPGGKKCIKRIRFSRKHFGEDQAQKWWEANESMIFGKYS 971


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 331/833 (39%), Positives = 485/833 (58%), Gaps = 47/833 (5%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            SL D+F+WGE  G+ +  G +    S A V +    P+ + +  ++DVQ++ACG +HAA+
Sbjct: 166  SLKDIFVWGEVPGNVLDHGDV----SKANVSL----PRLLNTTHIIDVQSVACGEKHAAI 217

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VTKQGEVFSWG + GGRLGH V   VS PK+I++L +  V+ +A G  HTCAV++SG++Y
Sbjct: 218  VTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY 277

Query: 308  TWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
             WG G++C  GL G   + S W P KL GPL+GI +  ++CG WHTA+++SAGQLF +GD
Sbjct: 278  EWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGD 336

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            GTFGVLGHGD ++V+ P++V+SLKG+R    ACG WHTAA+VE M   +  SN  SGKLF
Sbjct: 337  GTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM--GTVKSNAPSGKLF 394

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            TWGD DRG+LGH DK+ +LVPTCV  L + +F QVSC  + T+ LT TG V+T+GS  +G
Sbjct: 395  TWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHG 454

Query: 487  QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            +LG+P +       +EG L   FV EI+ G  H+AVLT   +V+TWGKG  G+LG GD  
Sbjct: 455  RLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYV 514

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCY 606
            DR++P+LVEAL+DKQV SI CG +FT AICLH+ +S  DQS+CS C++ F F RK+HNCY
Sbjct: 515  DRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQSVCSNCQLTFGFTRKKHNCY 574

Query: 607  NCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQ 666
            NCG ++C++CS+ K  +A++AP+ +K YRVCD CF ++ K  E     H  +  +  + +
Sbjct: 575  NCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKVEE-----HRKLDPQQKIQK 629

Query: 667  GFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNA 726
                 +E   ++  +    F  +   ++K+ S  S         R++ L +P+ V     
Sbjct: 630  DEVCPIE-IRSYTPKLARIFKEANAIMEKMASAQSPH------QRSQNLAVPDHV---RT 679

Query: 727  LNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASP--- 783
            L       P   S  +    S+P    +++ T   S          P P  S L S    
Sbjct: 680  LRWGLVECP---SQFRCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSANDS 736

Query: 784  KIVVDDAKRT-SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAA 842
            K  +D  +    EEV +L+ QV  L ++ + + ++++   R+++E   +A +E AKC+AA
Sbjct: 737  KAELDLMENILLEEVKQLQEQVTTLAKQCRQRSLKVQLYKRKVEETWLIAKDEAAKCKAA 796

Query: 843  KDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNG 902
            KD+IK L  Q   +++ L  G   +++    S   +     A +  P     F       
Sbjct: 797  KDIIKVLIDQHDFLSKNLLAGEKLDNSRIMPSHIASAKSLKAELPDPPDKNVFTSEFQQS 856

Query: 903  SNSLILSNGSDFG-DNRSPSQTEASHCEATTKNKNRT------------MKAEPAQGDEW 949
             ++    N      +   PS    ++   T +N  RT                P   +  
Sbjct: 857  KSNRDHHNSRQVDRECTQPSIASMANYSVTHQNCRRTSNGSTRCTEGTDATTAPTDSNGV 916

Query: 950  VEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
            +EQ E GVY T+V  PGG K +KR+RFSRK F E QA++WW AN + ++ +Y+
Sbjct: 917  IEQIERGVYATVVTSPGGKKCIKRIRFSRKHFGEDQAQKWWEANESMIFGKYS 969


>gi|225466229|ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 387/1020 (37%), Positives = 549/1020 (53%), Gaps = 111/1020 (10%)

Query: 7    FQRYPRPEKEYQSFSLIY--NDRSLDLICKDKDEAEVWFTGLKALISR-SHYRKGRAESR 63
            FQR  + E+E +SFSL+Y   +RSLDLICKDK +A+ WF GLKA+ISR  H R+      
Sbjct: 79   FQRQLQEERECRSFSLVYANGERSLDLICKDKAQADSWFLGLKAVISRCQHPRQLSTFRN 138

Query: 64   SDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
               V +   SP  + +R   L     +   SQ   L          SP +++ ++  SD 
Sbjct: 139  CVGVQTCFNSPAGYFRRKHNLGLLEDTPKFSQVRSL--------CGSPTQSLSERCFSDG 190

Query: 124  VLYAAPPKVLLPSESA-CGSVNSLSSGGSDG-RTGHLKG----LSGDTFRVSLSSAVSSS 177
            + Y+A       S  +   +V  +S   S      HLK      +G   +  + S V++ 
Sbjct: 191  LSYSADSFYSSESSVSNVKNVVDVSLPSSPYVEPDHLKQGEEIYAGTEIQTDMLSQVAAP 250

Query: 178  SQGSGH-DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQ 236
            S  S   +  D L DV IWGE    GILGGG++R G+  G++ D+ +PK +ES  +LDV+
Sbjct: 251  SHASPQMEKNDILRDVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTTMLDVR 310

Query: 237  NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
             I+ GG+HAALVTK GEVF WGE  GGRLGH V+ D+ +PK++++L  + V+ V+CGE+ 
Sbjct: 311  EISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQ 370

Query: 297  TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            TCA+T SG++YTWG +     L+G   + S W+P +L+GPL G  +S+V+CG WH A+V+
Sbjct: 371  TCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVS 430

Query: 357  SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            ++GQLFT+GDGTFGVLGHG   S+S P+EV+SL GL    AACG WHTAA+VEV      
Sbjct: 431  TSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVR-ADRL 489

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
              N   GKLFTWGDGD+GRLGHGD+E +L+PTCVA LV+ +F QVSCG  LTV LT  G 
Sbjct: 490  KFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLTCLGT 549

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            VYTM     G+LGD +     P  VE +L    VE IACG                    
Sbjct: 550  VYTM-----GRLGDTEDRNS-PAVVE-ELRYRQVESIACG-------------------- 582

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 596
                                            + FTAAICLHK +S  DQS CSGCR+ F
Sbjct: 583  --------------------------------SGFTAAICLHKSISSTDQSACSGCRMAF 610

Query: 597  NFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSS---- 652
             F RK+HNCYNCGL++C  CS+KK + AS+APN  KP+RVCD C+  L +   +S     
Sbjct: 611  GFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKPFRVCDPCYTYLQRIKHSSRLLKL 670

Query: 653  SSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRT 712
             +HS      +    F+E  + GE   +R+  QF +  +   +      K+  K +    
Sbjct: 671  ENHSPRQLLMTQKTSFDEKEDRGEGTPART--QFSSVGQPCNEASQSYEKKPFKNQVENQ 728

Query: 713  RGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATT 772
            + +   + +S G           +F    +  S +L        ++ P   + SP  +  
Sbjct: 729  QTVEPVSSLSNGLPRWGQVPCPFLFEKYCRENSIALVPLSNNQLSSVPLCWKHSPRGSKY 788

Query: 773  PTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVA 832
               T+  +   K   D  K   EEV +LR++   L +  Q++  +++   ++L+E  ++A
Sbjct: 789  MVSTVVNME--KDFPDTDKILIEEVERLRSEARSLEKLCQMRSEKIQECQQKLQETWSLA 846

Query: 833  GEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPS-- 890
             EE AKC+AAK+VIK+L+++L  M+E L   + R++     S  P   + +  ++ P   
Sbjct: 847  REEAAKCKAAKEVIKALSSRLHTMSEKL--SSERDAKDGIDSKLP--QIITRYVDTPKER 902

Query: 891  -------SPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEP 943
                   SP+ F       SNSL     S +G +     T +       K   R    +P
Sbjct: 903  QLDSLCGSPIVF-------SNSL----RSMYGRDECQGHTRSVEDSCLEKIDPRQNGTKP 951

Query: 944  AQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
            ++  EWVEQ E GVYIT + L  G + LKRVRFSRK+F+EK+AE+WW  N+  VYQ Y +
Sbjct: 952  SKL-EWVEQYEPGVYITFITLASGQRGLKRVRFSRKRFTEKEAERWWEENQIGVYQNYGI 1010


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 367/1014 (36%), Positives = 539/1014 (53%), Gaps = 103/1014 (10%)

Query: 32   ICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD-EVSSVATSPRAHTQRSSPLSSPFGS 90
            IC D+D+AE W+ GL+AL+           SRS  ++ S   +P ++ Q  S L S  G+
Sbjct: 75   ICSDRDQAEYWYLGLRALLPTPCSPCSSIGSRSSRQMDSCTNTPSSYVQLKSRLPSAHGT 134

Query: 91   GGSSQKDGLDPLHL--HTSYESPPKNVLDKALSDA--VLYAAPPKVLLPSESACGSVN-S 145
                      P H+  ++S+ +P K       +D    L+    +     ++  G +   
Sbjct: 135  ----------PRHIQVYSSHRNPKKATFFGGSADCSEALFYPRQRTFSDIDTYLGKLTRK 184

Query: 146  LSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILG 205
            +S+    G    + G      +++ +  + +          DSL DVF WG+  G  +  
Sbjct: 185  MSNPEIHGLQDIMVGNREKEEKITQTPKLKTFEGPRAACRLDSLKDVFFWGDAFGSILDY 244

Query: 206  GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 265
                +S           +P  V+S  +LDVQ+IACG  HAA++TKQGEV+SWG E  G +
Sbjct: 245  DDTSKS-----------LPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGGI 293

Query: 266  GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 325
            G+ V+  VS PKL++++ +++V+ VA G  H CAVT+SG+++ WG       L  + N  
Sbjct: 294  GNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQLDCYAN-- 351

Query: 326  SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPRE 385
            +LW P KL  PL+GI V  ++CGPWHTA++TS+GQL+T+GDGTFGVLGHGD    + P+E
Sbjct: 352  NLWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKE 411

Query: 386  VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
            V+ LKG R    ACG WHTAA+VEV+  S   SN    KLFTWGD DRG+LGH DK+ +L
Sbjct: 412  VEYLKGSRVKCVACGPWHTAAIVEVL--SDFKSNSPRSKLFTWGDADRGKLGHADKKMKL 469

Query: 446  VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKL 505
            +PTCV +L + +F QVSCG +LTV L+ TG V+T+GS ++GQLG+P A+G+    VEG L
Sbjct: 470  IPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADGRTVCAVEGLL 529

Query: 506  TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
               FV  I+ G  HVAVLT+  +V+TWGKG  G+LG GD  +R+ P+LV+AL+ +QV+SI
Sbjct: 530  KTEFVRHISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESI 589

Query: 566  VCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKAS 625
             CG ++TAA+CLHK +S  D S+CSGC++ F F RK+HNCY+CG ++C++CSS K  +A+
Sbjct: 590  SCGYNYTAAVCLHKIISRKDLSVCSGCKMAFGFTRKKHNCYHCGSMFCNSCSSNKVARAA 649

Query: 626  MAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQ 685
            +AP+  + YRVCD CF +L +  +++                             +S ++
Sbjct: 650  LAPDKIRRYRVCDGCFSQLLRVVDSAK---------------------------VKSELK 682

Query: 686  FGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPN-GVSQGNALNNSKSSNPVFGSTKKFF 744
                 E ++      S   K     R   LP+    + Q     N   + PV   ++++ 
Sbjct: 683  ISKGAEIIR------SYTPKLSRIFRDANLPVEKVALVQRPNQRNEVPATPVQAKSQRWG 736

Query: 745  SASLPGS--------RIMSRATSPTSRRSSPPRATTPTPTLSG--LASPKIVVDDAKR-- 792
                P          R  S + +     S   R    T   SG  L  P    DD ++  
Sbjct: 737  QVECPAQFLPGEDSFRYQSISKNHMCSASVSERMHDLTVLKSGRSLQQPN---DDQRKDL 793

Query: 793  ------TSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVI 846
                   +EEV +LR+QV  L  +   + +++E   ++L E   +  +E AKC+AAKD+I
Sbjct: 794  NTTETLLTEEVKQLRSQVTLLVEQYHQKALQVELYKQKLDETWLIVRDEAAKCKAAKDII 853

Query: 847  KSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTF--QGAIPNGSN 904
            K LT Q K ++E L VG         S+ +    +S+     P   L     G + N  N
Sbjct: 854  KVLTDQCKALSEKLLVGQQYEYLETKSNISQGQTLSADLQHYPCEKLARGKLGQLNNTKN 913

Query: 905  SLILSNG-SDFGDNRSPSQTEASHCEATTKNKNRTM--KAEPAQGDEWV---------EQ 952
                + G  ++  + S  Q E S       N +RT    A   QG+  V         EQ
Sbjct: 914  HETSTEGDEEYTPSSSDVQVEGSRSHL---NGSRTFDGNACVTQGNSLVARVTSNGVIEQ 970

Query: 953  DETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMV 1006
             E GVY+T    P G KD+KRVRFSRK F EK+A+ WW  N+  VY +Y+   V
Sbjct: 971  IERGVYVTFAVSPSGKKDIKRVRFSRKHFGEKEAQHWWEENKGSVYAKYSTEKV 1024


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
            protein [Zea mays]
          Length = 1044

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 373/1010 (36%), Positives = 541/1010 (53%), Gaps = 97/1010 (9%)

Query: 32   ICKDKDEAEVWFTGLKALISRSHYRKGRAESRSD-EVSSVATSPRAHTQRSSPLSSPFGS 90
            IC D+D+AE W+ GL+AL+          ESRS  ++ S   +P ++ Q  S L S  G+
Sbjct: 76   ICSDRDQAENWYLGLRALLPTPCNPCSSIESRSSRQIDSCTNTPSSYIQLKSKLLSVHGT 135

Query: 91   GGSSQKDGLDPLHLHT-SYESPPKNVLDKAL------SDAVLYAAPPKVLLPSESACGS- 142
                      P H+   S +  PK             S+++ Y           S  G+ 
Sbjct: 136  ----------PRHIQVCSSQRKPKKAHGTFFGGSADCSESLFYTRQRTF-----SDIGTY 180

Query: 143  VNSLSSGGSDGRTGHLK----GLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGEC 198
            + +L+   S+     LK    G      +++ +  + +          DSL DVF WG+ 
Sbjct: 181  LENLTRKMSNPEIHDLKDVMVGNQEKEQKITQTPKLKTFEGPRAACRLDSLKDVFFWGDA 240

Query: 199  TGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 258
             G  +  G   +            +P  V+S  +LDVQ+IACG  HAA++TKQGEV+SWG
Sbjct: 241  FGSILECGDTSKP-----------LPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWG 289

Query: 259  EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGL 318
             E  GR+G+ V+  VS PK++ +L +++V+ VA G  HTCAVT+SG++  WG       L
Sbjct: 290  NESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQL 349

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
              +      W P KL  PL+GI V  ++CGPWHTA++TS+GQL+T+GDGTFGVLGHGD  
Sbjct: 350  DSYARNQ--WFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQ 407

Query: 379  SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH 438
              + P+EV+SLKG R    ACG WHTAA+VEV+  S   SN    KLFTWGD DRG+LGH
Sbjct: 408  GTTRPKEVESLKGSRVKCVACGPWHTAAIVEVI--SDFKSNSPRSKLFTWGDADRGKLGH 465

Query: 439  GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLP 498
             DK+ +L+PTCV +L + +F QVSCG +LTVAL+ TG V+T GS ++GQLG+P A+GK  
Sbjct: 466  ADKKMKLIPTCVDSLTDYDFIQVSCGTALTVALSVTGVVFTSGSSMHGQLGNPHADGKTV 525

Query: 499  TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
            + VEG L   FV  I+ G  HVAV+T+  +V+TWGKG  G+LG GD  +R+ P+LV+AL+
Sbjct: 526  SAVEGLLKSEFVRHISSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFLNRSTPTLVDALE 585

Query: 559  DKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSS 618
             + V+S+ CG ++TAA+CLHK +S  D S+CSGC++ F F RK+HNCY+CG ++C++CSS
Sbjct: 586  GRHVESLSCGYNYTAAVCLHKVISRKDLSVCSGCKMAFGFTRKKHNCYHCGSMFCNSCSS 645

Query: 619  KKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENF 678
             K  KA++AP+ ++ YRVCD CF +L K  ++        + +G+      E +      
Sbjct: 646  NKVAKAALAPDKSRRYRVCDGCFSQLLKVVDSGKVKSELNTSKGA------EIIRSYTPK 699

Query: 679  VSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFG 738
            +SR        +E  K+  +   + N++ E   T   P+     Q  +    +   P   
Sbjct: 700  LSRIFRDVNLPVE--KEKVALVQRSNQRNEVLYT---PV-----QAKSQRWGQVECPA-- 747

Query: 739  STKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSG--LASPKIVVDDAKR---- 792
               +F SA    S   S + +     S   R   PT   SG  L  P    DD ++    
Sbjct: 748  ---QFLSAE-DSSHYQSISKNHMYSASVSERMHDPTVLKSGRSLQQPN---DDQRKDLNS 800

Query: 793  -----TSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIK 847
                  +EEV +LR+Q+  L  +   + +++E   ++L E   +   E AKC+AAKD+IK
Sbjct: 801  IEETLLTEEVKQLRSQMTLLMEQYHQKALQVELYKQKLDETWLIVRNEAAKCKAAKDIIK 860

Query: 848  SLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQ--GAIPNGSNS 905
             LT Q K ++E L VG    +    S+ +     S+     PS        G + N  N 
Sbjct: 861  VLTDQCKALSEKLLVGQQYENLETKSNISQGQTFSADLQHHPSEKFATGKFGQLDNTKNH 920

Query: 906  LILSNGSDFGDNRSPSQTEASHCEATTKNKN--RTMKA--EPAQGDEWV---------EQ 952
               S G    +  +PS +     E    + N  RT  +     +G+  V         EQ
Sbjct: 921  QTSSQGD---EEYTPSSSSDVQVEGLCGHLNGSRTFDSNGRITEGNSIVARVTSNGVIEQ 977

Query: 953  DETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
             E GVY+T    P G KD+KRVRFSRK F EK+A+ WW  N+  VY +Y+
Sbjct: 978  IERGVYVTFAVSPCGKKDIKRVRFSRKHFGEKEAQHWWEENKGSVYAKYS 1027


>gi|218195863|gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
          Length = 1012

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 340/834 (40%), Positives = 471/834 (56%), Gaps = 119/834 (14%)

Query: 252  GEVFSWGEEL-GGRLGHGVDS---------DVSHPKLIDALKNINVELVACGEHHTCAVT 301
            G+V+ WGE +       G DS         D+  PK +++   ++V  VACG  H   VT
Sbjct: 218  GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 277

Query: 302  LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG---------PLEGIHVSSVSCGPWHT 352
               +++TWG   C+ G LGHG   S++ P+ +           P+    V  +SCG WHT
Sbjct: 278  RQAEVFTWG-EECS-GRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLLSCGTWHT 335

Query: 353  AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            A+ TS+G+L+TFGDGTFGVLGHG+R ++S P+EV+SLKGLRT+  +CGVWHTAAVVEV++
Sbjct: 336  ALRTSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIM 395

Query: 413  GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
               + SN SSGKLFTWGDGD+ RLGHGD+ ++L PTCV +L++ NF +  CGH+LT+ LT
Sbjct: 396  ---AQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLT 452

Query: 473  TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            T+GH++T GS VYGQLG+P  +G+ P  VE KL    V E+ CG YHVAVLT   EVYTW
Sbjct: 453  TSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTW 512

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 592
            GKGANGRLGHGD  DR  P+ VEAL+D+ VK I CG+ FTAAIC HK VSG++QS CS C
Sbjct: 513  GKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGMEQSQCSSC 572

Query: 593  RIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSS 652
            R PF F RKRHNCYNCGLV+CH+CSSKK+++A+++PNP KPYRVCD+C+ KL+K  ++  
Sbjct: 573  RQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYLKLSKVLDSGI 632

Query: 653  SSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFN-- 710
              +   + R   +   ++    G    S        S + +K ++  ++K+ KK ++   
Sbjct: 633  GHNKNNTPRIPGDSKADKMDSKGNRVAS------ANSSDMIKNLDVKAAKQTKKYDYPPQ 686

Query: 711  -----RTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRS 765
                 + + +P      Q    N+S  S+P+           LP     S  +S      
Sbjct: 687  FPAILQLKDIPFIGAADQ--QPNDSTYSSPLL---------RLPNLNSSSSLSS------ 729

Query: 766  SPPRATTPTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQL 825
                            S  I+ D  +   +EV KL+ +V  L ++ + Q+ +L+++  + 
Sbjct: 730  ---------------ESFDILRDANELLKQEVQKLKEEVNSLRQQREQQDADLQKSEAKA 774

Query: 826  KEALAVAGEETAKCRAAKDVIKSLTAQLKDMAE---------------MLPVGAV----- 865
             EA+ +A EE +K +AAKDVIKSLTAQLK+MAE                LP GAV     
Sbjct: 775  HEAMTLASEEASKSKAAKDVIKSLTAQLKEMAERLPPASCDMKQTRQPYLPGGAVSPDTG 834

Query: 866  ------RNSNSFHSSPTPAWDVSS------AAIEQPSSPLTFQGAIPNGSNSLILSNGSD 913
                      SF    TP    S+      A   Q S P      +P+ S      N  +
Sbjct: 835  RENQKRYEPGSFQYPQTPTSVASARFNGFLAQAHQISEP-NGNTMVPHDSRHENNGNTKE 893

Query: 914  FGDNRSPSQTEASHCEATTKNKNR-------------TMKAEPAQGD----EWVEQDETG 956
            F   +  +    +     T++ +R              M+   +  +    EW+EQ E G
Sbjct: 894  FPVAQQMTNGGMTGYRPRTEDHDRRETERFQINLHGFNMRGSSSPSNQVEAEWIEQYEPG 953

Query: 957  VYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSS 1010
            VY+TLV+L  G K+LKRVRFSR++F E QAE WW  NR +VY +YNV   D+ S
Sbjct: 954  VYLTLVSLRDGTKELKRVRFSRRRFGEHQAESWWNDNREKVYDKYNVRGTDRIS 1007



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 39/48 (81%), Gaps = 2/48 (4%)

Query: 6   IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALIS 51
           +FQR+  PEK++ SFSLIYND  RSLDLICKDK EAEVWF GL  LIS
Sbjct: 70  VFQRFLLPEKDHLSFSLIYNDGKRSLDLICKDKVEAEVWFAGLNVLIS 117


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 316/831 (38%), Positives = 481/831 (57%), Gaps = 43/831 (5%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHA 245
            DSL D+F+WG+  G         R   +  V   +  +P+ ++S+ +L+VQ+IACG +HA
Sbjct: 194  DSLKDIFVWGDVLG---------RMSDHGHVPATNISLPRLLKSSQILNVQSIACGEKHA 244

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            A+VTKQG+VFSWGEE GGRLGH     VS PK+ID+L +  V+ +A G  +TCAV++SG+
Sbjct: 245  AIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGE 304

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +Y WG    + G   +  + S W P KL    +GI V  ++CG WHTA+++S G+L+T+G
Sbjct: 305  LYEWGEGIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTAIISSLGKLYTYG 364

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
             GTFGVLGHGD  SV  P+EV+SL+G R    ACG WHTAA+VE     +  S+   GKL
Sbjct: 365  YGTFGVLGHGDTHSVVHPKEVESLRGSRAKSVACGPWHTAAIVET--SGTLKSSAPGGKL 422

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            FTWGD   G+LGH +K+++LVPT V +L++ +F QVSCG SLT  LT TG V+T+GS  +
Sbjct: 423  FTWGDAGGGKLGHTNKKSKLVPTRVESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEH 482

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            GQLG+ +++      VEG L   FV++I+CG  HVAVLT   +V+TWGKG  G+LG GD 
Sbjct: 483  GQLGNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLGLGDY 542

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
             DR+ P+LVEAL+DKQV SI C ++FTA  C+H+ +S  DQS+CS CR+ F F RK+HNC
Sbjct: 543  VDRSSPTLVEALEDKQVDSIACSSNFTAVTCVHREISSKDQSVCSSCRLAFRFTRKKHNC 602

Query: 606  YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMN 665
            YNCG ++C++CSS K  +A++AP+ +K  RVCD CF +L K     ++ H  +S  GS  
Sbjct: 603  YNCGSMFCNSCSSNKVQRAALAPDKSKRCRVCDACFNELNK-----TAQHGKMS-CGSKT 656

Query: 666  QGFNEAVEHGENF---VSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 722
            Q    ++     +   +SR   +    ME +   +S + +  +    N+ +       V 
Sbjct: 657  QKEESSLTETRTYTPKLSRMLKEANFIMEKMGSAQSPNQRNQESATLNQMQRQRWGQ-VE 715

Query: 723  QGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSP--PRATTPTPTLSGL 780
              +    ++ + P + ++KK     L     + R T P S++++   P+AT        L
Sbjct: 716  CPDQFKCARDNIPHWLTSKKQTIDVL----CIGRMTDPVSQKTTAPLPQATNDRRKEQDL 771

Query: 781  ASPKIVVDDAKRTSEE--VIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAK 838
               KI++++ K+   +  ++ L  QV  L  + + + ++++   R+L+E   +  +E  K
Sbjct: 772  ME-KILLEEVKQLQAQMVILLLPKQVTTLAEECRHRSLKVQLYKRKLEETWLIVKDEATK 830

Query: 839  CRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVS-------SAAIEQPSS 891
            C+AAK++IK LT Q   ++  L      + +S    P     V+       S   +  ++
Sbjct: 831  CKAAKEIIKILTNQRNALSNKLLDDLELDDSSIVPDPPDKTHVTGKIPPLNSIRDQHNNN 890

Query: 892  PLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVE 951
                       SN+ ++ N +   + R  S +     +  T +        P   +  +E
Sbjct: 891  IEEVDMQSTTSSNTAVVDNSAVHQNGRRASNSSTGWYDGGTDS-----TIAPTDSNGVIE 945

Query: 952  QDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
            Q E GVYIT+V  P G K +KR+RFSRK F E +A++WW  N ++V+ +YN
Sbjct: 946  QIERGVYITVVTSPSGNKGIKRIRFSRKHFGEAEAQKWWEDNESKVFAKYN 996


>gi|297738141|emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 377/1017 (37%), Positives = 521/1017 (51%), Gaps = 218/1017 (21%)

Query: 7    FQRYPRPEKEYQSFSLIY--NDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
            FQR  + E+E +SFSL+Y   +RSLDLICKDK +A+ WF GLKA+ISR  + +  +  R+
Sbjct: 79   FQRQLQEERECRSFSLVYANGERSLDLICKDKAQADSWFLGLKAVISRCQHPRQLSTFRN 138

Query: 65   DE-VSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDA 123
               V +   SP  + +R   L     +   SQ   L          SP +++ ++  SD 
Sbjct: 139  CVGVQTCFNSPAGYFRRKHNLGLLEDTPKFSQVRSL--------CGSPTQSLSERCFSDG 190

Query: 124  VLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGH 183
            + Y                                             SA S  S  S  
Sbjct: 191  LSY---------------------------------------------SADSFYSSESSV 205

Query: 184  DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR 243
             + D L DV IWGE    GILGGG++R G+  G++ D+ +PK +ES  +LDV+ I+ GG+
Sbjct: 206  SNNDILRDVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTTMLDVREISLGGK 265

Query: 244  HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            HAALVTK GEVF WGE  GGRLGH V+ D+ +PK++++L  + V+ V+CGE+ TCA+T S
Sbjct: 266  HAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHS 325

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            G++YTWG +     L+G   + S W+P +L+GPL G  +S+V+CG WH A+V+++GQLFT
Sbjct: 326  GELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLFT 385

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            +GDGTFGVLGHG   S+S P+EV+SL GL    AACG WHTAA+VEV        N   G
Sbjct: 386  YGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVR-ADRLKFNTKGG 444

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            KLFTWGDGD+GRLGHGD+E +L+PTCVA LV+ +F QVSCG  LTV LT  G VYTM   
Sbjct: 445  KLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLTCLGTVYTM--- 501

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
              G+LGD +     P  VE +L    VE IACG                           
Sbjct: 502  --GRLGDTEDRNS-PAVVE-ELRYRQVESIACG--------------------------- 530

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
                                     + FTAAICLHK +S  DQS CSGCR+ F F RK+H
Sbjct: 531  -------------------------SGFTAAICLHKSISSTDQSACSGCRMAFGFTRKKH 565

Query: 604  NCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSS----SSHSTVS 659
            NCYNCGL++C  CS+KK + AS+APN  KP+RVCD C+  L +   +S      +HS   
Sbjct: 566  NCYNCGLLFCRACSNKKVLNASLAPNKKKPFRVCDPCYTYLQRIKHSSRLLKLENHS--P 623

Query: 660  RRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPN 719
            R+  M Q  +++ E            F   +E+ + VE  SS  N         GLP   
Sbjct: 624  RQLLMTQKTSQSYEKKP---------FKNQVENQQTVEPVSSLSN---------GLPRWG 665

Query: 720  GVSQGNALNNSKSSNPV----FGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTP 775
             V            N +    F  T K     +   R+ S A                  
Sbjct: 666  QVPCPFLFEKYCRENSIALKDFPDTDKILIEEV--ERLRSEA------------------ 705

Query: 776  TLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEE 835
                            R+ E++ ++R++        ++QE +     ++L+E  ++A EE
Sbjct: 706  ----------------RSLEKLCQMRSE--------KIQECQ-----QKLQETWSLAREE 736

Query: 836  TAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPS----- 890
             AKC+AAK+VIK+L+++L  M+E L   + R++     S  P   + +  ++ P      
Sbjct: 737  AAKCKAAKEVIKALSSRLHTMSEKL--SSERDAKDGIDSKLP--QIITRYVDTPKERQLD 792

Query: 891  ----SPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQG 946
                SP+ F       SNSL     S +G +     T +       K   R    +P++ 
Sbjct: 793  SLCGSPIVF-------SNSL----RSMYGRDECQGHTRSVEDSCLEKIDPRQNGTKPSK- 840

Query: 947  DEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
             EWVEQ E GVYIT + L  G + LKRVRFSRK+F+EK+AE+WW  N+  VYQ Y +
Sbjct: 841  LEWVEQYEPGVYITFITLASGQRGLKRVRFSRKRFTEKEAERWWEENQIGVYQNYGI 897


>gi|413938284|gb|AFW72835.1| putative regulator of chromosome condensation (RCC1) family protein
            [Zea mays]
          Length = 801

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 313/813 (38%), Positives = 459/813 (56%), Gaps = 68/813 (8%)

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
            +P+ ++S+ +LDVQ+IACG +HAA+VTKQG+VFSWGEE GGRLGH     VS PK+ID+L
Sbjct: 14   LPRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHKTSDSVSDPKIIDSL 73

Query: 283  KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
             +  ++ +A G  +TCAV++SG++Y WG    + G   +  + S W P KL    +GI V
Sbjct: 74   ASTPMKTIALGAKYTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLIRTSDGISV 133

Query: 343  SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
            + ++CG WHTA+V+S G+LFT+G GTFGVLGHGD  SV  P+EV+SL+GLR    ACG W
Sbjct: 134  AKIACGQWHTAIVSSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLRGLRVKSVACGPW 193

Query: 403  HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
            HTAA+VE     +  SN   GKLFTWG+    +LGH DK+++LVPT V +L++ +F QVS
Sbjct: 194  HTAAIVET--SGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRVESLIDCDFTQVS 251

Query: 463  CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
            CG            V+T+GS  +GQLG+P+++      VEG L   FV++I+ G+ HVAV
Sbjct: 252  CGV-----------VFTIGSKDHGQLGNPRSDSACICMVEGPLKTEFVKDISSGNSHVAV 300

Query: 523  LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVS 582
            LT   +V+TWGKG  G+LG GD  DR FP+LVEAL+DKQV SIVC ++FTA IC+H  +S
Sbjct: 301  LTMNGKVFTWGKGTEGQLGLGDYLDRTFPTLVEALEDKQVDSIVCSSNFTAVICVHGEIS 360

Query: 583  GVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFG 642
              D ++CS CR+ F F RK+HNCYNCG ++C++CSS K  +A++AP+ +K  RVCD CF 
Sbjct: 361  SKD-TVCSSCRLAFRFTRKKHNCYNCGSMFCNSCSSNKVQRATLAPDKSKRCRVCDACFN 419

Query: 643  KLTKATETSS-SSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSS 701
            +L K  E    S  S + +   + +      +     +SR   +    ME +  + S + 
Sbjct: 420  ELNKTAEHGKMSCESKIQKEPPLTETRTYTPK-----LSRMLKEANFIMEKMGSIRSPNQ 474

Query: 702  KRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPT 761
            +  +    N+ +         Q    +  K +              +   RI  R   P 
Sbjct: 475  RNQESATLNQMQ----KQRWGQVECPDQFKCARDNISHCLTSKKQPVDIGRI-GRMNDPV 529

Query: 762  SRRSSPP--RATTPTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELE 819
            S++++ P  R T        L   KI++       EEV +L+AQV  L  + + + ++++
Sbjct: 530  SQKTAAPLTRTTDKRRKEQDLIE-KIML-------EEVKQLQAQVTTLAEECRHRSLKVQ 581

Query: 820  RTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQ------LKDMA---------EMLPVGA 864
               R+L+E   +A +E  KC AAK++IK LT Q      +++++         + L   A
Sbjct: 582  LYKRKLEETWLIARDEATKCNAAKEIIKILTNQNFSDTVVRNLSSEPKVLCSMQHLCKNA 641

Query: 865  VRNSNSFHSSPTPAWDVSSAAIEQPS-SPLTFQGAIPNGSNSLILSNGSDFGDNRSP--S 921
             RN+ S         D S    + P  +P+T  G IP   NS+   +  +  D +S   S
Sbjct: 642  ERNALSNKLLDDLELDDSRIVPDPPDKTPVT--GKIP-PLNSIRDQHNIEEVDMQSTTSS 698

Query: 922  QTEASHCEATTKNKNRTMKAE------------PAQGDEWVEQDETGVYITLVALPGGLK 969
             T  +   A  +N  R   +             P      +EQ E GVYI++V  P G K
Sbjct: 699  NTVVADDSAVHQNGRRASNSSRGYDGGTDSTVAPTDSSGMIEQIERGVYISVVTSPDGKK 758

Query: 970  DLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
             +K +RFSRK F E +A++WW  N +RV+ +YN
Sbjct: 759  GIKSIRFSRKHFGETEAQKWWEENESRVFAKYN 791



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 126/288 (43%), Gaps = 63/288 (21%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDS--FVPKAVESAVVLDVQNIACGGRHAAL 247
           G+++ WGE         GIH  G        S  F  K + ++  + V  IACG  H A+
Sbjct: 95  GELYEWGE---------GIHSLGFKNNQCQRSPWFPHKLIRTSDGISVAKIACGQWHTAI 145

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS---- 303
           V+  G++F++G    G LGHG    V  PK +++L+ + V+ VACG  HT A+  +    
Sbjct: 146 VSSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLRGLRVKSVACGPWHTAAIVETSGTP 205

Query: 304 ------GDMYTWGGSNCNFGLLGHGNEMSLWLPKK------------------------- 332
                 G ++TWG  N +   LGH ++ S  +P +                         
Sbjct: 206 KSNAPGGKLFTWG--NASGEKLGHTDKKSKLVPTRVESLIDCDFTQVSCGVVFTIGSKDH 263

Query: 333 ---------------LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 377
                          + GPL+   V  +S G  H AV+T  G++FT+G GT G LG GD 
Sbjct: 264 GQLGNPRSDSACICMVEGPLKTEFVKDISSGNSHVAVLTMNGKVFTWGKGTEGQLGLGDY 323

Query: 378 ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           +  + P  V++L+  +     C    TA +      SS  + CSS +L
Sbjct: 324 LDRTFPTLVEALEDKQVDSIVCSSNFTAVICVHGEISSKDTVCSSCRL 371


>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
          Length = 1426

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 296/669 (44%), Positives = 406/669 (60%), Gaps = 71/669 (10%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            DSL D+F+WG+  G  +LG             +   +P+ V S  +LDVQ+IACG  HAA
Sbjct: 452  DSLKDIFLWGDVLGS-MLGSE----------DLPKALPRLVGSTKMLDVQSIACGENHAA 500

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
            ++TKQGEVFSWG+E  GRLGH V+  +S PK++  L +++V++VA G  HTCAVT+SG++
Sbjct: 501  IITKQGEVFSWGKESSGRLGHKVNVSLSCPKIVKTLASVHVKVVAFGSKHTCAVTVSGEL 560

Query: 307  YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            + WG    + GLL      + W+P KL GP++ I VS ++CG WH A++TS+GQLFT+GD
Sbjct: 561  FEWGEGANSLGLLNDWYGRNQWVPHKLFGPMDNISVSKIACGEWHMAIITSSGQLFTYGD 620

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            GTFGVLGHGD   ++ P+EV+SLKGLR    ACG WHTAA+VEVM  SS  +N  SGKLF
Sbjct: 621  GTFGVLGHGDTQGIARPKEVESLKGLRMSSVACGPWHTAAIVEVM--SSFKANAPSGKLF 678

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            TWG+ DRG+L H DK+ +LVPTCV +L+  +F QVSCG +LTV LT TG V+T+GS  +G
Sbjct: 679  TWGNADRGKLDHADKKMKLVPTCVDSLIVYDFIQVSCGMALTVVLTVTGVVFTVGSSRHG 738

Query: 487  QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            QLG+P+ +G+    VEG L   FV EI+ G  HVAVLT   +V+TWGKGA G+LG GD  
Sbjct: 739  QLGNPQVDGEYICTVEGLLKTEFVREISSGSSHVAVLTMNGKVFTWGKGAEGQLGLGDYV 798

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCY 606
            +R+ P+LVEAL+ + V+SI CG+SFTAAICLHK +S  DQS+CSGC++ F F RK+HNCY
Sbjct: 799  NRSSPTLVEALEGRHVESIACGSSFTAAICLHKAISIKDQSVCSGCQMAFGFTRKKHNCY 858

Query: 607  NCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQ 666
            NCG ++C++CSS K  KAS AP  N+ YRVCD CF +L KA ++S       + +G M  
Sbjct: 859  NCGSMFCNSCSSNKIAKASFAPE-NRRYRVCDVCFCQLQKAVDSSKVKSELKTSKGEM-- 915

Query: 667  GFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNA 726
                               F T M+S     S        + F     +     + QG  
Sbjct: 916  -------------------FKTEMKSYTPKLS--------RIFKEANFIVEKMALLQGPN 948

Query: 727  LNNSKSSNPVFGSTKKFFSASLPGSRIMSRAT---SPTSRRSSPPRATTPTPTLSGLASP 783
              N  S+ PV   T+++     P   I ++ +    P S+             + G++  
Sbjct: 949  QRNEDSATPVQVKTQRWGQVECPAQFISAQDSFQNKPMSKNQ-----------MCGISF- 996

Query: 784  KIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAK 843
                  ++R  + V+ LR+         +L+E ++      L +  AV  +E AKC+ AK
Sbjct: 997  ------SQRMHDSVV-LRSGSSLQQSADELKEYDI------LVDVQAVVRDEAAKCKPAK 1043

Query: 844  DVIKSLTAQ 852
            DVIK LT Q
Sbjct: 1044 DVIKVLTDQ 1052


>gi|22770461|gb|AAN06607.1| chromosome condensation regulator protein [Cicer arietinum]
          Length = 358

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/341 (62%), Positives = 270/341 (79%), Gaps = 11/341 (3%)

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
           VLGHGDR ++S PREV+SL GLRTV  ACGVWHTAA+VEV+V  SS+S  SSGKLFTWGD
Sbjct: 1   VLGHGDRENISYPREVESLSGLRTVAGACGVWHTAAIVEVIVAQSSAS-ISSGKLFTWGD 59

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
           GD+ RLGHGDK+ARL PTCV+AL++ NF +++CGHSLTV LTT+GHV+TMGS VYGQLG+
Sbjct: 60  GDKNRLGHGDKDARLEPTCVSALIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQLGN 119

Query: 491 PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
           P+++GKLP  VE KL    VEEIACG YHV VLTS+ EVYTWGKGANGRLGHGD +DR  
Sbjct: 120 PQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRKM 179

Query: 551 PSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGL 610
           P+LVEALKD+ VK I CG++++AAICLHKWVSG +QS CS CR  F F RKRHNCYNCGL
Sbjct: 180 PTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAFGFTRKRHNCYNCGL 239

Query: 611 VYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQ--GF 668
           V+CH+CSS+K+ +A++APNP KPYRVCD+C+ KL K  E+S++     +RR  M +  G 
Sbjct: 240 VHCHSCSSRKAFRAALAPNPGKPYRVCDSCYTKLIKIAESSNN-----NRRNGMPRFPGE 294

Query: 669 N-EAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE 708
           N + +E  E  + +  V   ++M+ +K+++S ++K+ KK +
Sbjct: 295 NKDRLEKSELRLLKPAVP--SNMDLIKQLDSKAAKQGKKAD 333



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 108/232 (46%), Gaps = 24/232 (10%)

Query: 203 ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK-----------Q 251
           +LG G   + SY         P+ VES   L     ACG  H A + +            
Sbjct: 1   VLGHGDRENISY---------PREVESLSGLRTVAGACGVWHTAAIVEVIVAQSSASISS 51

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G++F+WG+    RLGHG       P  + AL + N   +ACG   T  +T SG ++T G 
Sbjct: 52  GKLFTWGDGDKNRLGHGDKDARLEPTCVSALIDYNFHRIACGHSLTVGLTTSGHVFTMGS 111

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           +   +G LG+       LP  +   L G  V  ++CG +H  V+TS  +++T+G G  G 
Sbjct: 112 TV--YGQLGNPQSDGK-LPCLVEDKLAGECVEEIACGAYHVTVLTSKNEVYTWGKGANGR 168

Query: 372 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV-VEVMVGSSSSSNCSS 422
           LGHGD      P  V++LK       ACG  ++AA+ +   V  +  S CS+
Sbjct: 169 LGHGDIEDRKMPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCST 220


>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/359 (59%), Positives = 257/359 (71%), Gaps = 24/359 (6%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G+V+ WGE +   L   ++S+V           ++V  +ACG  H   VT  G+++TWG 
Sbjct: 237 GDVYIWGEVICDNLVKPLESNVV----------LDVHHIACGVRHAALVTRQGEIFTWGE 286

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNG-----------PLEGIHVSSVSCGPWHTAVVTSAGQ 360
            +   G LGHG    +  P+ +             PLEG+ V+SV+CGPWHTA+VT+  Q
Sbjct: 287 ESG--GRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQ 344

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           LFTFGDGTFGVLGHGD+ +V+ PREV+SL GLRT+  ACGVWHTAAVVEV+V  SS+S  
Sbjct: 345 LFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS-V 403

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
           SSGKLFTWGDGD+ RLGHGDKE RL PTCV AL+E NF +V+CGHSLTV LTT+G V TM
Sbjct: 404 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTM 463

Query: 481 GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
           GS VYGQLG+P+++GKLP  VE KL    VEEIACG YHVAVLTSR EVYTWGKGANGRL
Sbjct: 464 GSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 523

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFK 599
           GHGD +DR  P+LVE LKD+ VK I CG+++TAAICLHKWVSG  Q   S    PF+ K
Sbjct: 524 GHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAICLHKWVSGTVQIFSSRSVSPFSRK 582



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 202/553 (36%), Positives = 277/553 (50%), Gaps = 106/553 (19%)

Query: 6   IFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 63
           +FQRY RPEK+Y SFSLIYN+  RSLDLICKDK EAEVW  GLKALIS     + + +  
Sbjct: 77  VFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGW 136

Query: 64  SD--------EVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNV 115
           SD        +  +  +   +    +  +SSP  S G +     +      SY   P+N 
Sbjct: 137 SDGGLYFDDSKDLTSNSPSDSSVSATRDISSPEVSVGFNSNTSPN------SYR--PEN- 187

Query: 116 LDKALSDAVLYAAPPKVLLPSESACGSVNSLSSG-GSDGRTGHLKGLSGDTFRVSLSSAV 174
                      + PP+    S  A    N  + G GSD             FRVS+SSA 
Sbjct: 188 -----------SVPPE---RSHVALDHTNMQTKGSGSDA------------FRVSVSSAP 221

Query: 175 SSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           S+SS GS  DD D+LGDV+IWGE   D ++                    K +ES VVLD
Sbjct: 222 STSSHGSAPDDCDALGDVYIWGEVICDNLV--------------------KPLESNVVLD 261

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA--- 291
           V +IACG RHAALVT+QGE+F+WGEE GGRLGHGV  DV  P+L+++L   +V+ VA   
Sbjct: 262 VHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPL 321

Query: 292 ---------CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
                    CG  HT  VT +  ++T+G  +  FG+LGHG++ ++  P+++   L G+  
Sbjct: 322 EGLQVASVTCGPWHTALVTTTRQLFTFG--DGTFGVLGHGDKDNVAYPREVES-LSGLRT 378

Query: 343 SSVSCGPWHTAVV-----------TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
            +V+CG WHTA V            S+G+LFT+GDG    LGHGD+     P  V +L  
Sbjct: 379 IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIE 438

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
               + ACG   T  +             +SG++ T G    G+LG+   + +L      
Sbjct: 439 YNFQKVACGHSLTVGLT------------TSGQVCTMGSTVYGQLGNPQSDGKLPCFVED 486

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFV 510
            L+     +++CG      LT+   VYT G    G+LG     + K PT VE  L    V
Sbjct: 487 KLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVE-TLKDRHV 545

Query: 511 EEIACGDYHVAVL 523
           + IACG  + A +
Sbjct: 546 KYIACGSNYTAAI 558



 Score =  239 bits (609), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 204/669 (30%), Positives = 293/669 (43%), Gaps = 155/669 (23%)

Query: 460  QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC---- 515
             ++CG      +T  G ++T G    G+LG       +  R+   L    V+ +AC    
Sbjct: 264  HIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEG 323

Query: 516  --------GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
                    G +H A++T+  +++T+G G  G LGHGD D+  +P  VE+L   +  ++ C
Sbjct: 324  LQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVAC 383

Query: 568  GTSFTAAIC---------------LHKWVSGVDQSMCSGCRIPFNFKRKRHNC------Y 606
            G   TAA+                L  W  G    +  G + P    R +  C      Y
Sbjct: 384  GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEP----RLKPTCVPALIEY 439

Query: 607  NCGLVYC------------HTCSSKKSVKASMAPNPNK----PYRVCDNCFGKLTKATET 650
            N   V C              C+   +V   +  NP      P  V D   G+  +    
Sbjct: 440  NFQKVACGHSLTVGLTTSGQVCTMGSTVYGQLG-NPQSDGKLPCFVEDKLLGECVEEIAC 498

Query: 651  SSSSHSTVSRRGSM---NQGFNEAVEHGENFVSRSHVQFGTSMES-LKKVESGSSKRNKK 706
             +   + ++ R  +    +G N  + HG+    ++     T  +  +K +  GS      
Sbjct: 499  GAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGS------ 552

Query: 707  QEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSS 766
               N T  + L   VS                 T + FS         SR+ SP SR+ S
Sbjct: 553  ---NYTAAICLHKWVS----------------GTVQIFS---------SRSVSPFSRKPS 584

Query: 767  PPRATTPTPTLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTT 822
            PPR+ TP PT SGL+  K + D  K+T+E    EV+KLR QVE L  + +LQE+EL+++ 
Sbjct: 585  PPRSATPVPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQVESLRERCELQELELQKSA 644

Query: 823  RQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR-------------NSN 869
            ++++EA+ VA EE+AK +AAK+VIKSLTAQLKDMAE LP G                  N
Sbjct: 645  KKVQEAMVVATEESAKSKAAKEVIKSLTAQLKDMAERLPPGVYDAECMRPAYLLNGLEPN 704

Query: 870  SFH--------------------SSPTPAWDV----SSAAIEQPSSPLTFQGAIPNGSNS 905
              H                    +SPT  +      +  + +    PL    A P   N 
Sbjct: 705  GIHYPDSNGERHSRSDSINGSCLASPTGTYSAVINGTQGSTQLMRDPLGTNEANPYQQNL 764

Query: 906  LILS-------------NGSDFGDNRSPSQTEASHC---------EATTKNKNRTMKAEP 943
             +L+             NG       S S +EA  C         E  TK++N T+    
Sbjct: 765  GLLTSNVRDENPDIGMPNGGGGVRTSSSSVSEAVGCKDSGPLQDGEGGTKSRNSTLSDNS 824

Query: 944  AQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 1003
                EW+EQ E GVYITLVAL  G +DLKRVRFSR++F E QAE WW+ NR +VY++YNV
Sbjct: 825  QVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAENWWSENREKVYERYNV 884

Query: 1004 SMVDKSSVS 1012
               DKSSVS
Sbjct: 885  RGSDKSSVS 893



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 212 GSYAGVKMDSFVPKAVESAVVLD-VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
           G     + D  +P  VE  ++ + V+ IACG  H A++T + EV++WG+   GRLGHG  
Sbjct: 469 GQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDI 528

Query: 271 SDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
            D   P L++ LK+ +V+ +ACG ++T A+ L
Sbjct: 529 EDRKTPTLVETLKDRHVKYIACGSNYTAAICL 560


>gi|296086390|emb|CBI31979.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/387 (59%), Positives = 273/387 (70%), Gaps = 37/387 (9%)

Query: 5   PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
           PIFQRYPRPEKEYQSFSLIY DRSLDLICKDKDEAEVWF GLK LISR +YRK R+E R 
Sbjct: 76  PIFQRYPRPEKEYQSFSLIYGDRSLDLICKDKDEAEVWFIGLKGLISRGNYRKWRSEIRD 135

Query: 65  DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
           D +SS   SP +  +R SP  S    G + Q           ++E+ P++ L KA SD +
Sbjct: 136 DSISS--ESPHSRARRISPSLSSSDPGDTQQT--------QVTFENIPQSGLGKAFSDVI 185

Query: 125 LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD 184
            Y A  K    +ES   S++SLSSGG D   G     + + FRVSLSSAVSSSSQGSGHD
Sbjct: 186 SYTASTKSFTQAESVASSLSSLSSGGVDNSNGRTS--ASENFRVSLSSAVSSSSQGSGHD 243

Query: 185 DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
           D D+LGDVF+WGE  GDGI+G G+HR GS +  K+D+ +PKA+ES VVLDV +IACGG+H
Sbjct: 244 DFDALGDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKH 303

Query: 245 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
           A LVTK+GEVFSWGEE G RLGHGV+ DVSHPKLIDAL  +N+ELVACGE+H+CAVTLSG
Sbjct: 304 AVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSG 363

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           D+YTWG    N GLLGHG+E S W+PKK++                         QLFTF
Sbjct: 364 DLYTWGDGTHNSGLLGHGSEASHWIPKKVS-------------------------QLFTF 398

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKG 391
           GDGTFG LGHGD  S+S PREV++L+G
Sbjct: 399 GDGTFGALGHGDHSSMSIPREVEALRG 425



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 25/162 (15%)

Query: 304 GDMYTWGGSNCNFGLLGHG---------NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
           GD++ WG      G++G G          ++   LPK L   +  + V S++CG  H  +
Sbjct: 249 GDVFMWG-EGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVV-LDVHSIACGGKHAVL 306

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           VT  G++F++G+     LGHG  + VS P+ +D+L G+     ACG +H+ AV       
Sbjct: 307 VTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVT------ 360

Query: 415 SSSSNCSSGKLFTWGDG--DRGRLGHGDKEARLVPTCVAALV 454
                  SG L+TWGDG  + G LGHG + +  +P  V+ L 
Sbjct: 361 ------LSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSQLF 396



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 50/213 (23%)

Query: 359 GQLFTFGDGT-FGVLGHG---------DRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           G +F +G+G   G++G G          +I    P+ ++S   L     ACG  H   V 
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVT 308

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
           +             G++F+WG+    RLGHG +     P  + AL   N   V+CG   +
Sbjct: 309 K------------KGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHS 356

Query: 469 VALTTTGHVYTMGSPVY--GQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            A+T +G +YT G   +  G LG   +A+  +P +V                        
Sbjct: 357 CAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKV------------------------ 392

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
            ++++T+G G  G LGHGD    + P  VEAL+
Sbjct: 393 -SQLFTFGDGTFGALGHGDHSSMSIPREVEALR 424



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 480 MGSPVY--GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
           MG+ V+  G     K +  LP  +E  +  + V  IACG  H  ++T + EV++WG+   
Sbjct: 263 MGAGVHRVGSSSSTKIDALLPKALESTVVLD-VHSIACGGKHAVLVTKKGEVFSWGEECG 321

Query: 538 GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQS 587
            RLGHG   D + P L++AL    ++ + CG   + A+     L+ W  G   S
Sbjct: 322 SRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNS 375


>gi|414590766|tpg|DAA41337.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 521

 Score =  302 bits (773), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 170/404 (42%), Positives = 238/404 (58%), Gaps = 68/404 (16%)

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           GKLFTWGDGD+ RLGHGDKE +L PT            ++CGHSLTV LTT+  V +MG+
Sbjct: 37  GKLFTWGDGDKHRLGHGDKEPKLKPT------------IACGHSLTVGLTTSRQVLSMGN 84

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            VYGQLG+P++N                           VLT+++EV+TWGKGANGRLGH
Sbjct: 85  IVYGQLGNPRSN---------------------------VLTNKSEVFTWGKGANGRLGH 117

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKR 602
           GD +DR  P++VE+L+D+ ++ I CG++FT+AIC HKWVSG +QS  + CR PF F RKR
Sbjct: 118 GDVEDRKIPTVVESLRDRAIRHIACGSNFTSAICQHKWVSGAEQSQYASCRQPFGFTRKR 177

Query: 603 HNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRG 662
           HNC+NCGLV+C+ C+S K ++A++APNP KPYRVCD+CF KL  AT +     ST++++ 
Sbjct: 178 HNCHNCGLVHCNVCTSHKVLRAALAPNPAKPYRVCDSCFMKLNSATYS-----STINKKK 232

Query: 663 SMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE---FNRTRG----L 715
            +    +    H       +     ++++ ++ ++S ++K+ KK +   F RT      L
Sbjct: 233 EVVPRHSGESNHDAKL---ARAIVPSNLDMIRSLDSKAAKQGKKTDALSFLRTPQMSSLL 289

Query: 716 PLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTP 775
            L +    G    N      V  S +   S         SR  SP SR+ SPPR+TTP P
Sbjct: 290 QLRDITLSGVIDLNKSVPRAVRTSVRSLNS---------SRVVSPFSRKPSPPRSTTPVP 340

Query: 776 TLSGLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQE 815
           T  GL+  K   D   +T+E    EV +LRAQ  E+ +KS+ +E
Sbjct: 341 TTHGLSIAKTAADSLAKTNEMLSQEVERLRAQ-SEIVKKSKKRE 383



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 7/117 (5%)

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREV--DSLK-GLRTVRAACGVWHTAAVVEVMVGSS 415
           G+LFT+GDG    LGHGD+     P      SL  GL T R    V     +V   +G+ 
Sbjct: 37  GKLFTWGDGDKHRLGHGDKEPKLKPTIACGHSLTVGLTTSRQ---VLSMGNIVYGQLGNP 93

Query: 416 SSSNCSS-GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
            S+  ++  ++FTWG G  GRLGHGD E R +PT V +L +     ++CG + T A+
Sbjct: 94  RSNVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTVVESLRDRAIRHIACGSNFTSAI 150



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 42/158 (26%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G++F+WG+    RLGHG D +   PKL           +ACG   T  +T S  + + G 
Sbjct: 37  GKLFTWGDGDKHRLGHG-DKE---PKLKPT--------IACGHSLTVGLTTSRQVLSMG- 83

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
            N  +G LG+        P+                    + V+T+  ++FT+G G  G 
Sbjct: 84  -NIVYGQLGN--------PR--------------------SNVLTNKSEVFTWGKGANGR 114

Query: 372 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           LGHGD      P  V+SL+       ACG   T+A+ +
Sbjct: 115 LGHGDVEDRKIPTVVESLRDRAIRHIACGSNFTSAICQ 152



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 23/124 (18%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKA----------VESAVVLDVQNIA 239
           G +F WG+        G  HR G   G K     P              S  VL + NI 
Sbjct: 37  GKLFTWGD--------GDKHRLGH--GDKEPKLKPTIACGHSLTVGLTTSRQVLSMGNIV 86

Query: 240 ---CGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
               G   + ++T + EVF+WG+   GRLGHG   D   P ++++L++  +  +ACG + 
Sbjct: 87  YGQLGNPRSNVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTVVESLRDRAIRHIACGSNF 146

Query: 297 TCAV 300
           T A+
Sbjct: 147 TSAI 150


>gi|28874838|emb|CAC84088.1| ZR4 protein [Medicago sativa]
          Length = 300

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 182/295 (61%), Positives = 225/295 (76%), Gaps = 4/295 (1%)

Query: 680 SRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGS 739
           SR+ +   +SMES K+VES SSK+NKK EFN +R  P+PNG SQ  ALN SKS NPVFGS
Sbjct: 6   SRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPVFGS 65

Query: 740 TKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRT----SE 795
           +KKFFSAS+PGSRI+SRATSP SRR SPPR+TTPTPTL GL +PKIVVDDAK+T    S+
Sbjct: 66  SKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTTPKIVVDDAKKTNDSLSQ 125

Query: 796 EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKD 855
           EVIKLR+QVE LTRK+QLQEIELERT++QLK+A+A+AGEETAKC+AAK+VIKSLTAQLKD
Sbjct: 126 EVIKLRSQVESLTRKAQLQEIELERTSKQLKDAIAIAGEETAKCKAAKEVIKSLTAQLKD 185

Query: 856 MAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFG 915
           MAE LPVGA ++  S   +   + ++S AAI++ +   T   A   GSN+ +LSNGS   
Sbjct: 186 MAERLPVGAAKSVKSPSIASFGSNELSFAAIDRLNIQATSPEADLTGSNTQLLSNGSSTV 245

Query: 916 DNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKD 970
            +RS  Q + +  ++T +N +RT  +E     EWVEQDE GVYITL +LPGG  D
Sbjct: 246 SSRSTGQNKQNQSDSTNRNGSRTKDSESRSETEWVEQDEAGVYITLTSLPGGAID 300


>gi|345292929|gb|AEN82956.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292931|gb|AEN82957.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292933|gb|AEN82958.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292937|gb|AEN82960.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292939|gb|AEN82961.1| AT5G12350-like protein, partial [Capsella rubella]
          Length = 169

 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 139/171 (81%), Positives = 155/171 (90%), Gaps = 2/171 (1%)

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 314
           FSWGEE  GRLGHGVDS+V HPKLIDAL   N+ELVACGE+H+CAV+LSGD+YTWG    
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWG--KG 58

Query: 315 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 374
           +FG+LGHGNE+S W+PK++N  +EGIHVSS++CGP+HTAVVTSAGQLFTFGDGTFGVLGH
Sbjct: 59  DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 375 GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           GDR SV  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL
Sbjct: 119 GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 169



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 14/157 (8%)

Query: 317 GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
           G LGHG + ++  PK ++  L   ++  V+CG +H+  V+ +G L+T+G G FG+LGHG+
Sbjct: 9   GRLGHGVDSNVQHPKLID-ALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDFGILGHGN 67

Query: 377 RISVSTPREVDSL-KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
            +S   P+ V+ L +G+     ACG +HTA V             S+G+LFT+GDG  G 
Sbjct: 68  EVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVT------------SAGQLFTFGDGTFGV 115

Query: 436 LGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           LGHGD+++  +P  V +L      + +CG   T A+ 
Sbjct: 116 LGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 152



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 79/151 (52%), Gaps = 1/151 (0%)

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           F+WG+   GRLGHG       P  + AL   N   V+CG   + A++ +G +YT G   +
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 486 GQLGDP-KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           G LG   + +  +P RV   +    V  IACG YH AV+TS  +++T+G G  G LGHGD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                 P  V++LK  +     CG   TAA+
Sbjct: 121 RKSVFIPREVDSLKGLRTVRAACGVWHTAAV 151



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 82/159 (51%), Gaps = 21/159 (13%)

Query: 151 SDGRTGHLKGLSGDTFRVSLSSAVSSSSQ-----GSGHDDGDSL-GDVFIWGECTGD-GI 203
           S+GR GH  G+  +     L  A+ +++      G  H    SL GD++ WG+  GD GI
Sbjct: 7   SEGRLGH--GVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGK--GDFGI 62

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVV-LDVQNIACGGRHAALVTKQGEVFSWGEELG 262
           LG          G ++  +VPK V   +  + V +IACG  H A+VT  G++F++G+   
Sbjct: 63  LG---------HGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTF 113

Query: 263 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G LGHG    V  P+ +D+LK +     ACG  HT AV 
Sbjct: 114 GVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 152


>gi|345292913|gb|AEN82948.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292917|gb|AEN82950.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292919|gb|AEN82951.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292921|gb|AEN82952.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292923|gb|AEN82953.1| AT5G12350-like protein, partial [Capsella grandiflora]
          Length = 169

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 138/171 (80%), Positives = 155/171 (90%), Gaps = 2/171 (1%)

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 314
           FSWGEE  GRLGHGVDS+V HPKLIDAL   N+ELVACGE+H+CAV+LSGD+YTWG    
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWG--KG 58

Query: 315 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 374
           +FG+LGHGNE+S W+PK++N  +EGIHVSS++CGP+HTAVVTSAGQLFTFGDGTFGVLGH
Sbjct: 59  DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 375 GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           GDR SV  PRE+DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL
Sbjct: 119 GDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 169



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 90/157 (57%), Gaps = 14/157 (8%)

Query: 317 GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
           G LGHG + ++  PK ++  L   ++  V+CG +H+  V+ +G L+T+G G FG+LGHG+
Sbjct: 9   GRLGHGVDSNVQHPKLID-ALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDFGILGHGN 67

Query: 377 RISVSTPREVDSL-KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
            +S   P+ V+ L +G+     ACG +HTA V             S+G+LFT+GDG  G 
Sbjct: 68  EVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVT------------SAGQLFTFGDGTFGV 115

Query: 436 LGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           LGHGD+++  +P  + +L      + +CG   T A+ 
Sbjct: 116 LGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVV 152



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 1/151 (0%)

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           F+WG+   GRLGHG       P  + AL   N   V+CG   + A++ +G +YT G   +
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 486 GQLGDP-KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           G LG   + +  +P RV   +    V  IACG YH AV+TS  +++T+G G  G LGHGD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                 P  +++LK  +     CG   TAA+
Sbjct: 121 RKSVFIPREIDSLKGLRTVRAACGVWHTAAV 151



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 82/159 (51%), Gaps = 21/159 (13%)

Query: 151 SDGRTGHLKGLSGDTFRVSLSSAVSSSSQ-----GSGHDDGDSL-GDVFIWGECTGD-GI 203
           S+GR GH  G+  +     L  A+ +++      G  H    SL GD++ WG+  GD GI
Sbjct: 7   SEGRLGH--GVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGK--GDFGI 62

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVV-LDVQNIACGGRHAALVTKQGEVFSWGEELG 262
           LG          G ++  +VPK V   +  + V +IACG  H A+VT  G++F++G+   
Sbjct: 63  LG---------HGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTF 113

Query: 263 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G LGHG    V  P+ ID+LK +     ACG  HT AV 
Sbjct: 114 GVLGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVV 152


>gi|345292925|gb|AEN82954.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292927|gb|AEN82955.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292935|gb|AEN82959.1| AT5G12350-like protein, partial [Capsella rubella]
          Length = 169

 Score =  269 bits (688), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 138/171 (80%), Positives = 155/171 (90%), Gaps = 2/171 (1%)

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 314
           FSWGEE  GRLGHGVDS+V HPKLIDAL   N+ELVACGE+H+CAV+LSGD+YTWG    
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWG--KG 58

Query: 315 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 374
           +FG+LGHGNE+S W+PK++N  +EG+HVSS++CGP+HTAVVTSAGQLFTFGDGTFGVLGH
Sbjct: 59  DFGILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 375 GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           GDR SV  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL
Sbjct: 119 GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 169



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 14/157 (8%)

Query: 317 GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
           G LGHG + ++  PK ++  L   ++  V+CG +H+  V+ +G L+T+G G FG+LGHG+
Sbjct: 9   GRLGHGVDSNVQHPKLID-ALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDFGILGHGN 67

Query: 377 RISVSTPREVDSL-KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
            +S   P+ V+ L +G+     ACG +HTA V             S+G+LFT+GDG  G 
Sbjct: 68  EVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVT------------SAGQLFTFGDGTFGV 115

Query: 436 LGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           LGHGD+++  +P  V +L      + +CG   T A+ 
Sbjct: 116 LGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 152



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 79/151 (52%), Gaps = 1/151 (0%)

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           F+WG+   GRLGHG       P  + AL   N   V+CG   + A++ +G +YT G   +
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 486 GQLGDP-KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           G LG   + +  +P RV   +    V  IACG YH AV+TS  +++T+G G  G LGHGD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                 P  V++LK  +     CG   TAA+
Sbjct: 121 RKSVFIPREVDSLKGLRTVRAACGVWHTAAV 151



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 82/159 (51%), Gaps = 21/159 (13%)

Query: 151 SDGRTGHLKGLSGDTFRVSLSSAVSSSSQ-----GSGHDDGDSL-GDVFIWGECTGD-GI 203
           S+GR GH  G+  +     L  A+ +++      G  H    SL GD++ WG+  GD GI
Sbjct: 7   SEGRLGH--GVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGK--GDFGI 62

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVV-LDVQNIACGGRHAALVTKQGEVFSWGEELG 262
           LG          G ++  +VPK V   +  + V +IACG  H A+VT  G++F++G+   
Sbjct: 63  LG---------HGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGDGTF 113

Query: 263 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G LGHG    V  P+ +D+LK +     ACG  HT AV 
Sbjct: 114 GVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 152


>gi|345292915|gb|AEN82949.1| AT5G12350-like protein, partial [Capsella grandiflora]
          Length = 169

 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 137/171 (80%), Positives = 154/171 (90%), Gaps = 2/171 (1%)

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 314
           FSWGEE  GRLGHGVDS+V HPKLIDAL   N+ELVACGE+ +CAV+LSGD+YTWG    
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYXSCAVSLSGDLYTWG--KG 58

Query: 315 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 374
           +FG+LGHGNE+S W+PK++N  +EGIHVSS++CGP+HTAVVTSAGQLFTFGDGTFGVLGH
Sbjct: 59  DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 375 GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           GDR SV  PRE+DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL
Sbjct: 119 GDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 169



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 1/151 (0%)

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           F+WG+   GRLGHG       P  + AL   N   V+CG   + A++ +G +YT G   +
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYXSCAVSLSGDLYTWGKGDF 60

Query: 486 GQLGDP-KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           G LG   + +  +P RV   +    V  IACG YH AV+TS  +++T+G G  G LGHGD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                 P  +++LK  +     CG   TAA+
Sbjct: 121 RKSVFIPREIDSLKGLRTVRAACGVWHTAAV 151



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 89/157 (56%), Gaps = 14/157 (8%)

Query: 317 GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
           G LGHG + ++  PK ++  L   ++  V+CG + +  V+ +G L+T+G G FG+LGHG+
Sbjct: 9   GRLGHGVDSNVQHPKLID-ALGTTNIELVACGEYXSCAVSLSGDLYTWGKGDFGILGHGN 67

Query: 377 RISVSTPREVDSL-KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
            +S   P+ V+ L +G+     ACG +HTA V             S+G+LFT+GDG  G 
Sbjct: 68  EVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVT------------SAGQLFTFGDGTFGV 115

Query: 436 LGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           LGHGD+++  +P  + +L      + +CG   T A+ 
Sbjct: 116 LGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVV 152



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 13/114 (11%)

Query: 190 GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVV-LDVQNIACGGRHAAL 247
           GD++ WG+  GD GILG          G ++  +VPK V   +  + V +IACG  H A+
Sbjct: 50  GDLYTWGK--GDFGILG---------HGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 98

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           VT  G++F++G+   G LGHG    V  P+ ID+LK +     ACG  HT AV 
Sbjct: 99  VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVV 152


>gi|413923469|gb|AFW63401.1| putative regulator of chromosome condensation (RCC1) family protein
            [Zea mays]
          Length = 502

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 175/515 (33%), Positives = 262/515 (50%), Gaps = 34/515 (6%)

Query: 501  VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDK 560
            VEG L   FV++I+CG  HVAVL    +V+TWGKG  G+LG GD  DR+ P+LVEAL+DK
Sbjct: 2    VEGPLKTEFVKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDK 61

Query: 561  QVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKK 620
            QV SIVC ++ TAAIC+H  +S  DQS+CS CR+ F F RK+HNCYNCG + C++CSS K
Sbjct: 62   QVDSIVCSSNSTAAICVHGEISSKDQSVCSSCRLAFRFTRKKHNCYNCGSMVCNSCSSNK 121

Query: 621  SVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENF-- 678
              +A++AP+ +K  RVCD CF +L K  E     H  +S  GS  Q     +     +  
Sbjct: 122  VHRAALAPDKSKRCRVCDACFNELNKTAE-----HGKMSC-GSKIQKEPSYLAETRTYTP 175

Query: 679  -VSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVF 737
             +SR   +    ME +        +RN++              V   +    ++ + P  
Sbjct: 176  KLSRMLKEANFIMEKMGSSAQSPGQRNQEPATPNQMQKERWGQVECPDRFKCARDNIPHR 235

Query: 738  GSTKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSEEV 797
             + KK      P    M R   P S++++ P     T T S     + +++  K   EEV
Sbjct: 236  LTPKKQTIDDYP----MRRMADPVSQKTAAPL----TQTTSDRRKEQDLIE--KILLEEV 285

Query: 798  IKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMA 857
             +L+AQV  L  + + + +++    R+L+E   +  +E  KC AA+++IK LT Q   ++
Sbjct: 286  KQLQAQVTTLAEECRHRSLKVRLYKRKLEETWLIVRDEATKCEAAEEIIKVLTNQRNALS 345

Query: 858  EMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDN 917
              L  G   + +S   +P    D + A  + P  PL       N     +L   S    N
Sbjct: 346  NKLLDGLELDGSSIVPNPP---DKALATCKTP--PLNSIRDQHNAEAEEVLDTRSTASSN 400

Query: 918  RSPSQTEASHCEATTKNKNRTM----------KAEPAQGDEWVEQDETGVYITLVALPGG 967
                   A+H    ++  + +            A P   +  +EQ E GVYIT+V  P G
Sbjct: 401  TVAVDDSAAHQNGRSRASSSSRGYYDDGGTDSTAAPTDSNGVIEQIERGVYITVVTSPSG 460

Query: 968  LKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
             K +KR+RFSRK F E +A++WW  N +RV+ +Y+
Sbjct: 461  KKGIKRIRFSRKHFGEAEAQKWWERNESRVFAKYD 495



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 1/94 (1%)

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 392
           + GPL+   V  +SCG  H AV+   G++FT+G GT G LG GD +  S+P  V++L+  
Sbjct: 2   VEGPLKTEFVKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDK 61

Query: 393 RTVRAACGVWHTAAV-VEVMVGSSSSSNCSSGKL 425
           +     C    TAA+ V   + S   S CSS +L
Sbjct: 62  QVDSIVCSSNSTAAICVHGEISSKDQSVCSSCRL 95



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 49/80 (61%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V++I+CG  H A++   G+VF+WG+   G+LG G   D S P L++AL++  V+ + C  
Sbjct: 11  VKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQVDSIVCSS 70

Query: 295 HHTCAVTLSGDMYTWGGSNC 314
           + T A+ + G++ +   S C
Sbjct: 71  NSTAAICVHGEISSKDQSVC 90



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 400 GVWHTAAVVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           G   T  V ++  GSS  +  + +GK+FTWG G  G+LG GD   R  PT V AL +   
Sbjct: 4   GPLKTEFVKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQV 63

Query: 459 CQVSCGHSLTVALTTTGHV 477
             + C  + T A+   G +
Sbjct: 64  DSIVCSSNSTAAICVHGEI 82


>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
           magnipapillata]
          Length = 809

 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/463 (33%), Positives = 231/463 (49%), Gaps = 33/463 (7%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           D++ WG  +  G+LG          G + +   P+ VE+ +  D++ +ACG  H   V+ 
Sbjct: 374 DIYTWGA-SPKGVLG---------HGEETEELFPRVVEALLGRDIRTVACGTEHTLAVSV 423

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            GE+FSWG   GG+LG     D   P  I A +N+N+  V+C E H+ +VT SG++YT+G
Sbjct: 424 NGEMFSWGCGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFG 483

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            S  + G      + ++  P+K++       + +VSCG   T  + S G+L++FG    G
Sbjct: 484 RSGPHLGYTTEDRKQAV--PRKVDFSTAN-KIKAVSCGLEFTIALNSEGELYSFGKNDCG 540

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LG G    +  P  +  L G+R  + +CG  H  AV              +G ++ WG 
Sbjct: 541 QLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVT------------VNGDVWLWGS 588

Query: 431 GDRGRLGHGDKEARLVP-TCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            + G+LG    EA  +P    +         + CG S TV L+ TG VY  G+   GQLG
Sbjct: 589 NEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSGQLG 648

Query: 490 DPKANGKLPTRVEGKL----TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
               N   P      +        + ++ CG  H A +T    +YTWG G+ GRLGHGD 
Sbjct: 649 -VAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYTWGNGSRGRLGHGDH 707

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
            DR  P+LVE+L  KQV+SI CG   TAA  +  WV   +   C  C+  F   R+RH+C
Sbjct: 708 QDRYVPTLVESLAYKQVQSIACGAYHTAACVIRAWVHDQETKSCMACKQRFTTVRRRHHC 767

Query: 606 YNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKAT 648
             CG ++C TCS +K     +    ++P RVCD C+  LT++T
Sbjct: 768 RKCGGIFCGTCSQRKC--PLLEIGYSEPVRVCDRCYFILTEST 808



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 219/488 (44%), Gaps = 67/488 (13%)

Query: 19  SFSLIYND----RSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDEVSSVATSP 74
           SFS+IY      RSLD++CKD+ E ++W  GL+ALI+      G        + S A   
Sbjct: 296 SFSVIYKQGNTKRSLDIVCKDRVEYDIWTVGLQALIN------GFDNLDGLRLMSEADLS 349

Query: 75  RAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVLYAAPPKVLL 134
           +A  +    L   FG   S ++D  D      ++ + PK VL        L+    + LL
Sbjct: 350 KADGKLMLEL-GLFGDRVSVKEDACDIY----TWGASPKGVLGHGEETEELFPRVVEALL 404

Query: 135 PSE---SACGSVNSLSSG----------GSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGS 181
             +    ACG+ ++L+            G  G+ G LK +      + + +  + +    
Sbjct: 405 GRDIRTVACGTEHTLAVSVNGEMFSWGCGRGGKLG-LKNILDRYMPLKIGAFENVNITFV 463

Query: 182 GHDDGDSL-----GDVFIWGECTGDGILGGGIHRSGSYAGVKMD---SFVPKAVESAVVL 233
             ++  S      G+++ +G             RSG + G   +     VP+ V+ +   
Sbjct: 464 SCNELHSASVTESGELYTFG-------------RSGPHLGYTTEDRKQAVPRKVDFSTAN 510

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
            ++ ++CG      +  +GE++S+G+   G+LG G  +D+  P LI  L  + +  V+CG
Sbjct: 511 KIKAVSCGLEFTIALNSEGELYSFGKNDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCG 570

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
             H  AVT++GD++ WG +   FG LG     +  +P +         +  + CG  HT 
Sbjct: 571 SKHVGAVTVNGDVWLWGSN--EFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTV 628

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRIS---VSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           V++  G ++ FG+G  G LG     +   ++ P  +      +  +  CG+ HTAAV E 
Sbjct: 629 VLSCTGVVYVFGNGQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTE- 687

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      SG L+TWG+G RGRLGHGD + R VPT V +L       ++CG   T A
Sbjct: 688 -----------SGCLYTWGNGSRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTAA 736

Query: 471 LTTTGHVY 478
                 V+
Sbjct: 737 CVIRAWVH 744



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 18/239 (7%)

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            +V   A  ++T+G    GVLGHG+      PR V++L G      ACG  HT AV    
Sbjct: 366 VSVKEDACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTEHTLAV---- 421

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                S N   G++F+WG G  G+LG  +   R +P  + A    N   VSC    + ++
Sbjct: 422 -----SVN---GEMFSWGCGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASV 473

Query: 472 TTTGHVYTMGS--PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           T +G +YT G   P  G   + +    +P +V+   T N ++ ++CG      L S  E+
Sbjct: 474 TESGELYTFGRSGPHLGYTTEDRKQA-VPRKVDFS-TANKIKAVSCGLEFTIALNSEGEL 531

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH--KWVSGVDQ 586
           Y++GK   G+LG G  +D   P L++ L   ++  + CG+    A+ ++   W+ G ++
Sbjct: 532 YSFGKNDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNE 590


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/388 (39%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           V+ WG    DG LG          G   D   P  +++     +  IACG  H  ++T +
Sbjct: 3   VYSWGRGE-DGQLG---------LGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDE 52

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           GEV++WG    GRLGHG +     P+L++ L+  N+  V CG +HT AVT+SGD+YTWGG
Sbjct: 53  GEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG 112

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
               +G LGHGNE     P  L   L+G+ V  V+CG  HT V+     ++T+GD   GV
Sbjct: 113 GM--YGKLGHGNETGHSTPF-LVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGV 169

Query: 372 LGHGD-RISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            GHGD       P  V+ L+G   V+ +ACG +HTAA+ E             G++FT+G
Sbjct: 170 SGHGDTEGHQYLPCPVEELRGKNIVQISACG-FHTAALSEF------------GEVFTFG 216

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           +G  GRLGH  +  + V   V AL      QV+CG   T A+T TG VYT G   +GQLG
Sbjct: 217 EGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLG 276

Query: 490 D-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
              K N  +PTRVE  L +  V +I CG  H   LT   EVYTWG G +G+LGH DT   
Sbjct: 277 HGDKVNKTVPTRVE-SLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKV 335

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAIC 576
             P LV+ L+ K+V S+      T A+ 
Sbjct: 336 TLPKLVDVLEGKRVISVASYNEHTVALV 363



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 123/219 (56%), Gaps = 12/219 (5%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           DV+ WG+   +G+ G G      Y        +P  VE     ++  I+  G H A +++
Sbjct: 158 DVYTWGD-KENGVSGHGDTEGHQY--------LPCPVEELRGKNIVQISACGFHTAALSE 208

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            GEVF++GE   GRLGH  + +    + ++AL    V+ VACG  HT AVT +G++YTWG
Sbjct: 209 FGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWG 268

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           G     G LGHG++++  +P ++   +E + V  ++CG  HT  +T  G+++T+G+G  G
Sbjct: 269 GGE--HGQLGHGDKVNKTVPTRVESLVEKL-VVQITCGWSHTVALTDTGEVYTWGNGDHG 325

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            LGH D   V+ P+ VD L+G R +  A    HT A+V+
Sbjct: 326 KLGHNDTTKVTLPKLVDVLEGKRVISVASYNEHTVALVD 364



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 84/155 (54%)

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           +++WG G+ G+LG GD   +  P  + AL E    Q++CG   TV LT  G VYT G   
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGD 62

Query: 485 YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            G+LG      K   R+  +L    + ++ CG YH A +T   ++YTWG G  G+LGHG+
Sbjct: 63  DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGN 122

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK 579
               + P LVE LK  QV+ + CG+  T  +  +K
Sbjct: 123 ETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENK 157


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/477 (32%), Positives = 237/477 (49%), Gaps = 54/477 (11%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDS--FVPKAVESAVVLDVQNIACGGRH 244
           D+  D+++WG        GG   R G     K D   F+P  VES +  +V  IACGG H
Sbjct: 159 DNSCDLYLWG--------GGDRGRLGH----KDDKPRFLPNVVESLLGQNVTMIACGGSH 206

Query: 245 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA-LKNINVELVACGEHHTCAVTLS 303
              +  +G+VFSWG    G LGHG   D   P +ID  L+++NV  VAC E+H+  ++  
Sbjct: 207 TIALNSKGQVFSWGAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISED 266

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           G++YTWG +    G +   + ++     +L   L G  +  V+CG  HT V+   G++++
Sbjct: 267 GNLYTWGKAGPFLGYMD--DSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYS 324

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           FG   FG LG G   +++ P  V +L  +   + +CG  H+AA+ E             G
Sbjct: 325 FGINKFGELGQGHDKAITKPTMVPNL--VSICKVSCGRHHSAAIDE------------DG 370

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG-- 481
            LF WG G RG+LG G+ ++   PT V    +     VSCG+  T A+T  G  Y  G  
Sbjct: 371 VLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDN 430

Query: 482 --------SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
                   S VYG+L  P+    LP+ +          +I CG     ++TS  +++TWG
Sbjct: 431 ASSQCGVPSSVYGELSSPRGI-VLPSGIRPT-------QINCGANFTVLVTSIGQLFTWG 482

Query: 534 KGANGRLGHGDTDDRNF--PSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSG 591
              +G+LG+G+   + F  P  VE+L +K+VK + CG      +  H WV   +   C  
Sbjct: 483 CNMSGQLGNGEAK-KTFSQPMPVESLSEKRVKMVACGEDHIGCLVGHGWVPDEEVKSCMA 541

Query: 592 CRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKAT 648
           C+  F   R+RH+C  CG ++C +CS+K+     +      P RVCD C+  L+ ++
Sbjct: 542 CKKSFTAIRRRHHCRQCGGIFCGSCSTKRY--PLLDKGHADPVRVCDKCYVSLSSSS 596


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/388 (39%), Positives = 205/388 (52%), Gaps = 30/388 (7%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           V+ WG    DG LG          G   D   P  +++     +  IACG  H  ++T++
Sbjct: 3   VYSWGRGE-DGQLG---------LGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEE 52

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           GEV++WG    GRLGHG +     P+L++ L+  N+  V CG +HT AVT+SGD+YTWGG
Sbjct: 53  GEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG 112

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
               +G LGHGNE     P  L   L+ + V  V+CG  HT V+     ++T+GD   GV
Sbjct: 113 GM--YGKLGHGNETGHSTPY-LVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGV 169

Query: 372 LGHGD-RISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            GHGD       P  V+ L+G   V+ +ACG +HTAA+ E             G++FT+G
Sbjct: 170 SGHGDTEGHQYLPCPVEELRGKSIVQISACG-FHTAALSEF------------GEVFTFG 216

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           +G  GRLGH  +  + V   V AL      QV+CG   T A+T TG VYT G   +GQLG
Sbjct: 217 EGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLG 276

Query: 490 D-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
              K N  +PTRVE  L K  V +I CG  H   LT   EVYTWG G +G+LGH DT   
Sbjct: 277 HGDKVNKTVPTRVESLLEK-LVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKV 335

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAIC 576
             P  V+ L  K+V S+      T A+ 
Sbjct: 336 TLPKPVDVLDGKRVISVASYNEHTVALV 363



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 123/219 (56%), Gaps = 12/219 (5%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           DV+ WG+   +G+ G G      Y    ++    K++       VQ  ACG  H A +++
Sbjct: 158 DVYTWGD-KENGVSGHGDTEGHQYLPCPVEELRGKSI-------VQISACG-FHTAALSE 208

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            GEVF++GE   GRLGH  + +    + +DAL    V+ VACG  HT AVT +G++YTWG
Sbjct: 209 FGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWG 268

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           G     G LGHG++++  +P ++   LE + V  ++CG  HT  +T  G+++T+G+G  G
Sbjct: 269 GGE--HGQLGHGDKVNKTVPTRVESLLEKL-VLQITCGWSHTVTLTDTGEVYTWGNGDHG 325

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            LGH D   V+ P+ VD L G R +  A    HT A+V+
Sbjct: 326 KLGHNDTAKVTLPKPVDVLDGKRVISVASYNEHTVALVD 364



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 84/155 (54%)

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           +++WG G+ G+LG GD   +  P  + AL E    Q++CG   TV LT  G VYT G   
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGD 62

Query: 485 YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            G+LG      K   R+  +L    + ++ CG YH A +T   ++YTWG G  G+LGHG+
Sbjct: 63  DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGN 122

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK 579
               + P LVE LK  QV+ + CG+  T  +  +K
Sbjct: 123 ETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENK 157


>gi|384245633|gb|EIE19126.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 1375

 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 155/450 (34%), Positives = 213/450 (47%), Gaps = 75/450 (16%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GD ++WG          GI  +      +  S  P  VE +  LDV  +A G RHAALVT
Sbjct: 249 GDCYVWGSSDA------GIPPAQGSICDRQQSATPAIVEDSTHLDVCQVAVGLRHAALVT 302

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           + GEV++WG   GG+LG G  +D   P+ +D L    +  +  G      V+  G +YTW
Sbjct: 303 RSGEVYTWGNGAGGKLGLGHATDACAPQRVDTLWGQRIRSIVAG----AVVSEEGFLYTW 358

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G  +   G LG+ N +  ++P+++ G L    ++ VSCGP+H+A ++S G LFT+GDG  
Sbjct: 359 G--DGAAGNLGYSNALRQFIPRRVEGTLLDHTITQVSCGPYHSAALSSTGALFTWGDGLC 416

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG---------------- 413
           G LGHG   S   PR+VD+LK  R +  ACGVWHTAA+    +G                
Sbjct: 417 GKLGHGCLDSCLEPRQVDALKDKRVLHVACGVWHTAAIAAGPIGGSSLPSSLSELSFQEA 476

Query: 414 ---------SSSSSNCSSGKLFTWG--------------------DGDRGRLGHGDKEAR 444
                    + S  +   G LFTWG                    D  RG LGHGD    
Sbjct: 477 EALRHKLSAAYSMLDEEGGALFTWGGHFTWVDHRKNSAGHPVDKRDHHRGCLGHGDTAGC 536

Query: 445 LVPTCV-AALVEPNFCQVSCGHSLTVALTTTGHVYTMG-SPVYGQLGDPKANGKLPTRVE 502
           L PT V  AL      QV CG +LTVALT  G ++ MG +   G    P    +   +V 
Sbjct: 537 LAPTRVGGALQGLAVRQVECGLNLTVALTADGRIWQMGETGAPGHKLAPWEGAREAVQV- 595

Query: 503 GKLTKNFVEEIACGDYHVAVL-------TSRTE-------VYTWGKGANGRLGHGDTDDR 548
             +  ++VE IA G  H A L       T R E       ++TWG+G  G+LG G   D 
Sbjct: 596 -PIPDHYVERIAVGMQHAAALAGPLDGQTGRAEEGAECSVIFTWGRGREGQLGVGMHADS 654

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
             P+ V+ L+ + V  + CG   T A+C H
Sbjct: 655 AIPAPVDELRGRHVLQVACGGCHTLAVCRH 684



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 43/74 (58%)

Query: 943  PAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYN 1002
            P  G E   +   GV++TL A P G   L R+RF+R +FS+ QAE WW A++A V ++YN
Sbjct: 1293 PKTGLEHTVEPSEGVFLTLQATPLGQNALTRIRFARGRFSKAQAEAWWRAHKAEVAERYN 1352

Query: 1003 VSMVDKSSVSIGRE 1016
            ++       S G E
Sbjct: 1353 LAPGSPRVPSAGTE 1366



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 12/133 (9%)

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE-------- 511
           +V+    L V     G  Y  GS      G P A G +  R +   T   VE        
Sbjct: 234 RVTGAMGLPVPEQRPGDCYVWGS---SDAGIPPAQGSICDRQQ-SATPAIVEDSTHLDVC 289

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
           ++A G  H A++T   EVYTWG GA G+LG G   D   P  V+ L  ++++SIV G   
Sbjct: 290 QVAVGLRHAALVTRSGEVYTWGNGAGGKLGLGHATDACAPQRVDTLWGQRIRSIVAGAVV 349

Query: 572 TAAICLHKWVSGV 584
           +    L+ W  G 
Sbjct: 350 SEEGFLYTWGDGA 362



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 5/55 (9%)

Query: 3   LQPIFQRYPRPEKEYQSFSLIYND-----RSLDLICKDKDEAEVWFTGLKALISR 52
           L  IF+R+P P   + SFSL+Y D     R+LDL C+++ E ++W+ G++A+  R
Sbjct: 128 LTEIFKRHPLPHMAHASFSLMYIDLDLSSRTLDLTCRNQQEFDLWYWGIQAIKDR 182


>gi|296086391|emb|CBI31980.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/325 (44%), Positives = 199/325 (61%), Gaps = 33/325 (10%)

Query: 688  TSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSAS 747
            +S++S  + ES   K + K EFN  R  P  NG  Q  + ++SK SN +FG ++K FSAS
Sbjct: 42   SSVDSFSRAESKHYKCDTKLEFNDARVSPHLNGNVQRGSFHSSKLSNSLFGGSRKIFSAS 101

Query: 748  LPGSRIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRT----SEEVIKLRAQ 803
             PGSRI+SRATSP S +SSPP++     +L+ + SP+   DD K T    S E+I LRAQ
Sbjct: 102  RPGSRIVSRATSPVSGKSSPPQSAMLAASLAVVRSPEATDDDPKHTNDSLSREIINLRAQ 161

Query: 804  VEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVG 863
            VE LT KSQ+ E ELER++R+LKE  AVA  E  KC+AAK+VIKSLTAQLK+MAE +P  
Sbjct: 162  VENLTGKSQILEAELERSSRKLKEVTAVAEGEAEKCKAAKEVIKSLTAQLKEMAERVPEE 221

Query: 864  AVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSN-SLILSNGSDFGDNRSPSQ 922
             +  S S  S+      V   + E  S+ LT   +  NGS+ + ILS+G+        +Q
Sbjct: 222  HISISKSGSSARQTPNIVDMFSNENHSTSLTSPESESNGSSVNPILSSGTK-------AQ 274

Query: 923  TEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFS 982
            TE S                     +WV QDE GVY+TL +L GG  +L+RVRFSRK+F+
Sbjct: 275  TEKS---------------------DWVVQDEPGVYLTLSSLAGGGNELRRVRFSRKRFT 313

Query: 983  EKQAEQWWAANRARVYQQYNVSMVD 1007
            E+QAE WWA N ++V +++++  V+
Sbjct: 314  EEQAEVWWAENGSKVCERHDIRSVE 338


>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
 gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
          Length = 596

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/396 (33%), Positives = 212/396 (53%), Gaps = 36/396 (9%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           ++++WGE   G LGHG D+  +HP +++AL   ++  VACG  HT A++  G++++WG  
Sbjct: 208 DIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSG 267

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA---GQLFTFGDGTF 369
               G LG G+    + P ++ G LE ++++ V+C  +H+A V +    G LF+FG+  +
Sbjct: 268 Y--GGRLGQGHLRDRFTPIRICG-LESLNLTQVACNEFHSAAVCACSKQGALFSFGENDY 324

Query: 370 GVLGH-GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG   D++  S  + V SL   +  R ACG +H+AA+ E             G L+ W
Sbjct: 325 GQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAE------------HGSLWLW 372

Query: 429 GDGDRGRLGHGDKEARLVPTCVAA---LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           G  + G+LG+G+  +  +P+ + A   L      +V+CG   +  +T  G ++  G   Y
Sbjct: 373 GCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTY 432

Query: 486 GQLG-------DPKANGKLPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGAN 537
           GQLG       D      +  RV  ++  +F    +ACGD H AV+T   E++TWG+G  
Sbjct: 433 GQLGAHLNDNQDDHVTYNVAVRV--RVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKG 490

Query: 538 GRLGHGDTDDRNFPSLVE-ALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 596
           GRLGHGD  +R+ P+ +E  ++ K V+ + CG + TA      WV   +   C  C+  F
Sbjct: 491 GRLGHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHTACTVTRAWVPDQEVKTCMACKTRF 550

Query: 597 NFKRKRHNCYNCGLVYCHTCSSKKSVKASM---APN 629
              R+RH+C  CG V+C  CSSK+    S+   APN
Sbjct: 551 TTVRRRHHCRKCGGVFCGACSSKRVPILSLGYSAPN 586



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 117/231 (50%), Gaps = 23/231 (9%)

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           V   A  ++T+G+GT G+LGHG+    + P  V++L G    + ACG  HT A+ +    
Sbjct: 202 VKEDACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSK---- 257

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV-A 470
                    G++F+WG G  GRLG G    R  P  +  L   N  QV+C   HS  V A
Sbjct: 258 --------DGEVFSWGSGYGGRLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCA 309

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGKLPT---RVEGKLTKNFVEEIACGDYHVAVLTSRT 527
            +  G +++ G   YGQLG P+   KL T   +    L+++ +  +ACG +H A L    
Sbjct: 310 CSKQGALFSFGENDYGQLGIPE--DKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHG 367

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEA---LKDKQVKSIVCGTSFTAAI 575
            ++ WG   +G+LG+G+    + PSL+EA   L+   V  + CG   +A I
Sbjct: 368 SLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFI 418



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 192/446 (43%), Gaps = 71/446 (15%)

Query: 6   IFQRYPRPEKEYQSFSLIYN-----DRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRA 60
           +F+    P+ E  SFS++Y       RSLD++CK + E ++W  G++AL+S         
Sbjct: 113 VFESCQVPQYECLSFSIMYKVNNGPIRSLDIVCKSRREFDIWTCGIQALLS--------G 164

Query: 61  ESRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSS----QKDGLDPL-----------HLH 105
            S    ++ V          S  +   FG  G +    ++D  D             H  
Sbjct: 165 FSDIQAMNKVDFEDSQDQTDSGTVEVEFGLLGQATVHVKEDACDIYTWGEGTNGMLGHGE 224

Query: 106 TSYESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSG-GSDGRTGHLKGLSGD 164
            + E+ P +V++  L   +   A       + S  G V S  SG G     GHL+    D
Sbjct: 225 DTQEAHP-HVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGRLGQGHLR----D 279

Query: 165 TF---------RVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYA 215
            F          ++L+    +    +        G +F +GE    G LG          
Sbjct: 280 RFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGE-NDYGQLG---------- 328

Query: 216 GVKMDSFVPKAVESAVVLDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
            +  D  +   ++    L    I   ACG  H+A + + G ++ WG    G+LG+G  + 
Sbjct: 329 -IPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTS 387

Query: 273 VSHPKLIDA---LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG-HGNE---- 324
            S P L++A   L++  V  VACG+ H+  +T  G M+  G +   +G LG H N+    
Sbjct: 388 TSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDN--TYGQLGAHLNDNQDD 445

Query: 325 -MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 383
            ++  +  ++  P +      V+CG  HTAVVT  G++FT+G G  G LGHGD ++   P
Sbjct: 446 HVTYNVAVRVRVPTD-FRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGHGDNLNRHLP 504

Query: 384 REVD-SLKGLRTVRAACGVWHTAAVV 408
            E++  ++G      +CG  HTA  V
Sbjct: 505 TEIEIGMEGKHVRGVSCGRAHTACTV 530



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G   V V     ++YTWG+G NG LGHG+      P +VEAL  K ++ + CG + T A+
Sbjct: 196 GQATVHVKEDACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLAL 255


>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 566

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/422 (33%), Positives = 212/422 (50%), Gaps = 63/422 (14%)

Query: 263 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
           GR+GHG + D   P++++AL   +V  +ACG  HT A   +G +YTWG      G LGH 
Sbjct: 156 GRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWGAGQ---GRLGHD 212

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
           +E   ++P +++  L G  V   +CG  HTA +T AG+++T+G G  GVLGHGD  + ST
Sbjct: 213 HERDRFIPLEVSA-LGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACST 271

Query: 383 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE 442
           PREV SL                 VV V+V  ++     SG ++ WG  ++G+LG GD+ 
Sbjct: 272 PREVASL-----------ALQVIVVVIVVVVVAAVVAGGSGTVYAWGGNEKGQLGFGDRT 320

Query: 443 ARLVPTCVAALVEPNFCQVSCGH---SLTV-----ALTTTGHVYTMGSPVYGQLGDPKAN 494
            R+ P  +A L   +  +++C +   +L V     A      ++T G    GQLG     
Sbjct: 321 PRMSPALLADL--SSISRIACTYLQSNLPVKRRHRARQLMMRMWTWGDGASGQLGHGTEE 378

Query: 495 GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR------ 548
            +L  R    L +  +  +A G  H A LTS+ EV+TWG G++G+LGHG    R      
Sbjct: 379 EELVPRQVMALEQVNIIAVAAGKAHTAALTSQGEVWTWGDGSDGQLGHGAAILRYCKPLL 438

Query: 549 ------------------------------NFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
                                         + P  VEA++ K+VK++ CG    AA+ LH
Sbjct: 439 IESLKDSGHLYAWGNSRRGALGGGLAEEVVSVPRAVEAMEGKKVKAVACGKRHCAALVLH 498

Query: 579 KWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCD 638
            W+   + ++C  C+ PF   R+RH+C NCG ++C +CSSK+   A +      P RVCD
Sbjct: 499 AWIPDEESTLCMACKAPFTMIRRRHHCRNCGGLFCGSCSSKRI--ALLDAGFASPVRVCD 556

Query: 639 NC 640
            C
Sbjct: 557 RC 558



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 204/485 (42%), Gaps = 76/485 (15%)

Query: 5   PIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRS 64
           P+F++  +PE E  SFS+IY D++LDL+ K+  E ++W  GLK L    H          
Sbjct: 71  PVFKKNRKPEYENVSFSIIYGDKTLDLVSKNVRERDIWVQGLKVLTLEPHLL-------- 122

Query: 65  DEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAV 124
            EV SVAT     + +     +       S  +G         ++ P   V++  L   V
Sbjct: 123 SEVDSVATDEEKVSVKFKGKRTIVEKREVSNDNGRVGHGDEEDHKVP--RVVEALLGKDV 180

Query: 125 LYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA-----VSSSSQ 179
              A       + +  G + +  +G   GR GH      D F     SA     V  ++ 
Sbjct: 181 RGIACGAAHTAAWNGAGVLYTWGAG--QGRLGHDH--ERDRFIPLEVSALGGKKVVQAAC 236

Query: 180 GSGHDDGDS-LGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVES-AVVLDVQN 237
           G  H    +  G V+ WG+  G G+LG G   + S          P+ V S A+ + V  
Sbjct: 237 GYAHTAAITDAGRVYTWGQGKG-GVLGHGDESACS---------TPREVASLALQVIVVV 286

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---- 293
           I      A +    G V++WG    G+LG G  +    P L+  L +I+   +AC     
Sbjct: 287 IVVVVVAAVVAGGSGTVYAWGGNEKGQLGFGDRTPRMSPALLADLSSIS--RIACTYLQS 344

Query: 294 ----EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
               +    A  L   M+TWG  +   G LGHG E    +P+++   LE +++ +V+ G 
Sbjct: 345 NLPVKRRHRARQLMMRMWTWG--DGASGQLGHGTEEEELVPRQVMA-LEQVNIIAVAAGK 401

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            HTA +TS G+++T+GDG+ G LGHG  I     P  ++SLK                  
Sbjct: 402 AHTAALTSQGEVWTWGDGSDGQLGHGAAILRYCKPLLIESLK------------------ 443

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSL 467
                        SG L+ WG+  RG LG G  E  + VP  V A+       V+CG   
Sbjct: 444 ------------DSGHLYAWGNSRRGALGGGLAEEVVSVPRAVEAMEGKKVKAVACGKRH 491

Query: 468 TVALT 472
             AL 
Sbjct: 492 CAALV 496



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 583
           NGR+GHGD +D   P +VEAL  K V+ I CG + TAA      L+ W +G
Sbjct: 155 NGRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWGAG 205


>gi|145351110|ref|XP_001419929.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580162|gb|ABO98222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 783

 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 147/387 (37%), Positives = 196/387 (50%), Gaps = 45/387 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+ +E    LDV  IA G RH    T+ G V+SWGE  GG+LG     D   P  ++ L 
Sbjct: 65  PRVLEGTDTLDVVEIAIGARHGLARTRAGAVYSWGEGAGGKLGLPSAQDAEMPTRVE-LD 123

Query: 284 NINVELVACGEHHTCAVTLS---------GDMYTWGGSNCNFGLLGHGNEMSL-WLPKKL 333
              V L ACG  H+ AV            GD   WG  N   GLLG     ++ + P K+
Sbjct: 124 GRAVTL-ACGVAHSLAVVRDADASSDGDGGDACVWGDPNAAPGLLGRPEARAVTFFPGKI 182

Query: 334 NGPLE------GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 387
           +  ++      G+ V  VSCGP HTA VT  G  FT+G+G+F  LGHGDR     PRE++
Sbjct: 183 SFAMDSISAGGGVKVVQVSCGPCHTACVTETGACFTWGEGSFYALGHGDRECQRAPRELE 242

Query: 388 SLKGLRTV--RAACGVWHTAAVVEV---------MVGSSSSSNCSSGKLFTWGDGDRGRL 436
           + +    V  R ACGVWHTAA+V           +V      +   G+LFTWGDG+ G+L
Sbjct: 243 TFRRDNRVVLRVACGVWHTAAIVAAVGNTIRKVPVVADDDEFDTVDGELFTWGDGESGQL 302

Query: 437 GHGDKEARLVPTCVA-ALVEP--NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA 493
           G    E   VPT  +  L +P    C VSCG   TVALT+ G V+     + G +G  K 
Sbjct: 303 GIRGVEEASVPTATSDQLGKPGSEVCNVSCGQHHTVALTSKGDVW-----LAGCVG--KV 355

Query: 494 NGKLPTRVEGKLTKNF----VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD-DR 548
           +  L  +V  +L  NF    V  +  GD HV   T    V++WG G NGRLGHG  D D+
Sbjct: 356 DNSLRVKVFTRL-PNFETGSVSAVESGDNHVVAATRDGRVFSWGVGKNGRLGHGKNDRDK 414

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
             P  +E+L+ + V  I CG + +A +
Sbjct: 415 AAPEEIESLRGRTVLRIACGPTSSACV 441



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 133/316 (42%), Gaps = 79/316 (25%)

Query: 168 VSLSSAVSSSSQGSGHDDGDSLGDVFIWGE-CTGDGILGGGIHRSGSYAGVKMDSFVPKA 226
           V+ S AV   +  S   DG   GD  +WG+     G+LG    R+ ++   K+ SF   +
Sbjct: 133 VAHSLAVVRDADASSDGDG---GDACVWGDPNAAPGLLGRPEARAVTFFPGKI-SFAMDS 188

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
           + +   + V  ++CG  H A VT+ G  F+WGE     LGHG       P+ ++  +  N
Sbjct: 189 ISAGGGVKVVQVSCGPCHTACVTETGACFTWGEGSFYALGHGDRECQRAPRELETFRRDN 248

Query: 287 --VELVACGEHHTCAV---------------------TLSGDMYTWG-GSNCNFGLLG-- 320
             V  VACG  HT A+                     T+ G+++TWG G +   G+ G  
Sbjct: 249 RVVLRVACGVWHTAAIVAAVGNTIRKVPVVADDDEFDTVDGELFTWGDGESGQLGIRGVE 308

Query: 321 --------------HGNEM-----------------SLWLPK---KLNGPL--------- 337
                          G+E+                  +WL     K++  L         
Sbjct: 309 EASVPTATSDQLGKPGSEVCNVSCGQHHTVALTSKGDVWLAGCVGKVDNSLRVKVFTRLP 368

Query: 338 --EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG--DRISVSTPREVDSLKGLR 393
             E   VS+V  G  H    T  G++F++G G  G LGHG  DR   + P E++SL+G  
Sbjct: 369 NFETGSVSAVESGDNHVVAATRDGRVFSWGVGKNGRLGHGKNDR-DKAAPEEIESLRGRT 427

Query: 394 TVRAACGVWHTAAVVE 409
            +R ACG   +A V++
Sbjct: 428 VLRIACGPTSSACVLK 443



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 1/62 (1%)

Query: 945  QGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVS 1004
            +  EW+++ E GV++TL    G    LKRVRFS++ FS + A+QWW  N+ RV ++ +++
Sbjct: 720  EAREWIDEVENGVFMTL-RTHGDRTILKRVRFSKRIFSNELAKQWWEENKERVIRENDLT 778

Query: 1005 MV 1006
            ++
Sbjct: 779  IL 780



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 5/110 (4%)

Query: 200 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
           GD  L G + +  +   VK+ + +P   E+  V  V++   G  H    T+ G VFSWG 
Sbjct: 344 GDVWLAGCVGKVDNSLRVKVFTRLPN-FETGSVSAVES---GDNHVVAATRDGRVFSWGV 399

Query: 260 ELGGRLGHGV-DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
              GRLGHG  D D + P+ I++L+   V  +ACG   +  V     M T
Sbjct: 400 GKNGRLGHGKNDRDKAAPEEIESLRGRTVLRIACGPTSSACVLKPARMTT 449


>gi|259490066|ref|NP_001159144.1| uncharacterized protein LOC100304223 [Zea mays]
 gi|223942239|gb|ACN25203.1| unknown [Zea mays]
          Length = 450

 Score =  216 bits (549), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 160/485 (32%), Positives = 244/485 (50%), Gaps = 89/485 (18%)

Query: 584  VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGK 643
            ++QS CS CR PF F RKRHNCYNCGLV+CH+CSSKK+++A+++PNP KPYRVCD+C+ K
Sbjct: 1    MEQSQCSACRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYVK 60

Query: 644  LTKATETS-SSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSK 702
            L+K  ++  S S +T+ R     +   E ++     V++S+     S + ++ ++  ++K
Sbjct: 61   LSKVLDSGVSYSRNTIPRLPGDTKA--ERIDTKATRVAQSN-----SSDMIRNLDVKAAK 113

Query: 703  RNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTS 762
            + KK E++                     S  P     K     S P  + +S   +  +
Sbjct: 114  QTKKSEYS---------------------SQVPATLQLKDIPFISAPDLQNLS---TVAN 149

Query: 763  RRSSPPRATTPTPTLSGL--------ASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQ 814
            +    PR+T P+  +  L         S + + D  +   +EV KL+A+V  L ++ + Q
Sbjct: 150  QYPYDPRSTLPSLRMPYLNYSSSMSSESSESLKDANELLKQEVQKLQAEVNSLRQEREQQ 209

Query: 815  EIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGA---------- 864
            + EL++   + +EA+ +A EE +K + AKDVI SLTAQLK+M+E LP GA          
Sbjct: 210  DAELQKADAKAREAMNLATEEASKLKTAKDVINSLTAQLKEMSERLPPGACDVKNNGRVM 269

Query: 865  ------------VRNSNSFHSSPTPAW---DVSSAAIEQPS---------------SPLT 894
                        +R  + F   P   +   + S  A+  P                SP+ 
Sbjct: 270  GDLAPEMGREKQMRYGDRFSGLPAQVYQTSNYSETAMVPPQGSSRSEHVDGVREFFSPVQ 329

Query: 895  FQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDE 954
             Q A   GS ++     SD  D R   + + +     T++ N       A   EW+EQ E
Sbjct: 330  -QMANGGGSTTIGYRYRSDDHDRRETDRFQINLQSLNTRSSNSPSNQVDA---EWIEQYE 385

Query: 955  TGVYITLVALPGGLKDLKRVRF----SRKKFSEKQAEQWWAANRARVYQQYNVSMVDK-S 1009
             GVY+TLV+L  G K+LKRVRF    SR++F E QAE WW  N  +VY +YNV   D+ S
Sbjct: 386  PGVYLTLVSLRDGTKELKRVRFSVVCSRRRFGEHQAESWWKDNCEKVYDKYNVCGTDRLS 445

Query: 1010 SVSIG 1014
            SV+  
Sbjct: 446  SVTTA 450


>gi|94983836|gb|ABF50623.1| G93-GW [Glycine max]
          Length = 466

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 163/487 (33%), Positives = 243/487 (49%), Gaps = 59/487 (12%)

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNF 598
            +LG GDT+DR  P  VEAL+D+QV +I CG SFTAAI LHK +S  DQS C+GCR+PF F
Sbjct: 2    QLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAISLHKPISISDQSTCTGCRLPFGF 61

Query: 599  KRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATETSSSSHSTV 658
             RK+HNCYNCGL++C  CSSKK   A +AP+ +K +RVCD CF K          +HS +
Sbjct: 62   TRKKHNCYNCGLLFCRACSSKKITNAPLAPSKSKAFRVCDQCFDK------RQGGAHSVM 115

Query: 659  SRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLP 718
            + + S N    + ++H       +  +  T++     +  G S   K           +P
Sbjct: 116  ASK-SRNYNTQQVLKHQHKISDVTEDRGETTVTQGPMLSLGQSCYRKS----------MP 164

Query: 719  NG----VSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPPR--ATT 772
            +G     +      + + S+ + G   ++     P    ++   +P    SS     AT 
Sbjct: 165  SGRKDWKNHQEIQQDVEDSSSMLGGMPQWGQVPCPAMFQINCTENPVVHVSSSKNKLATV 224

Query: 773  PTPTLSGLA---SPKIVVDDAKRTS---EEVIKLRAQVEELTRKSQLQEIELERTTRQLK 826
                +   A   S  +  D  K      EEV +LRA+ + L  + +L+  +++   ++++
Sbjct: 225  SPFNVESTAYNFSSNVETDTTKSDKVLLEEVHRLRAEAKRLEEQCELKNRKIQECRQKIE 284

Query: 827  EALAVAGEETAKCRAAKDVIKSLTAQLK----------DMAEMLPVGAVRNSNSFHSSPT 876
            E+  VA EE AKC+AAK+VIK+L  + +             +  P   V N    H+   
Sbjct: 285  ESWFVAREEAAKCKAAKEVIKALALRARVVDARAGNVGQEGKAGPNEFVPNVAPIHTEMK 344

Query: 877  PAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKN 936
               DV+  ++   +SP+ F   +            S FG +  P    ++  E+   N +
Sbjct: 345  SPRDVNVDSLS--NSPIVFSDTL-----------KSKFGRSLFPKIDNSNRAESQQDNID 391

Query: 937  RTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRAR 996
              +KA      EWVEQ E GVYIT   L  G K LKRVRFSRK+FSEK+AE+WW  N+  
Sbjct: 392  -GLKA------EWVEQYEPGVYITFTTLQCGKKGLKRVRFSRKRFSEKEAEKWWEENQGT 444

Query: 997  VYQQYNV 1003
            VY +Y +
Sbjct: 445  VYHKYGI 451


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/367 (40%), Positives = 196/367 (53%), Gaps = 30/367 (8%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           VF WG    DG LG          G   D   P  V++   + VQ IACG  H  ++T  
Sbjct: 2   VFTWGRGE-DGQLG---------LGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTD 51

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           GEVF+WG    GRLGHG +     P++  +L    V  V CG +HT AVT +GD+YTWGG
Sbjct: 52  GEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGG 111

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
               +G LGHG+E     PK++   L G  V+ ++CG  HTA+VT++G L+T+GD   GV
Sbjct: 112 GM--YGKLGHGDEAGHATPKRVE-ALVGATVAQIACGSRHTAIVTASGALYTWGDKENGV 168

Query: 372 LGHGD-RISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            GHG+       PR ++S+   R  + +ACG +HTA V +            +G+LFTWG
Sbjct: 169 AGHGETEGHQYLPRLLESMAAKRVAQISACG-FHTAIVTD------------AGELFTWG 215

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           +G  GRLGH  +     PT V  +V     QVSCG   T  ++  G +YT G   +GQLG
Sbjct: 216 EGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLG 275

Query: 490 -DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
            + + N   PT VE  L   FV +I CG  H   LT +  VYTWG G +G+LGHG+    
Sbjct: 276 HNDRVNKMTPTFVE-ALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKV 334

Query: 549 NFPSLVE 555
             P  VE
Sbjct: 335 AVPQAVE 341



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/326 (36%), Positives = 179/326 (54%), Gaps = 18/326 (5%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           VF+WG    G+LG G  SD   P  +DAL+ + V+ +ACG  HT  +T  G+++TWG   
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWG--R 59

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
            + G LGHG+    ++P+ +   L G  V  V+CG +HTA VT  G L+T+G G +G LG
Sbjct: 60  GDDGRLGHGDNGWKYVPR-MTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 374 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
           HGD    +TP+ V++L G    + ACG  HTA V             +SG L+TWGD + 
Sbjct: 119 HGDEAGHATPKRVEALVGATVAQIACGSRHTAIVT------------ASGALYTWGDKEN 166

Query: 434 GRLGHGDKEA-RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-P 491
           G  GHG+ E  + +P  + ++      Q+S     T  +T  G ++T G   +G+LG   
Sbjct: 167 GVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMS 226

Query: 492 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
           + N   PT V+  + K    +++CG +H AV++    +YT+G G +G+LGH D  ++  P
Sbjct: 227 ERNCHSPTIVDYMVGKK-PRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTP 285

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICL 577
           + VEAL    V  I CG S + A+ +
Sbjct: 286 TFVEALDGMFVSQITCGWSHSVALTV 311



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 82/160 (51%), Gaps = 4/160 (2%)

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           +FTWG G+ G+LG GD   +  PT V AL      Q++CG   TV LTT G V+T G   
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGD 61

Query: 485 YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            G+LG      K   R+   L    V ++ CG YH A +T   ++YTWG G  G+LGHGD
Sbjct: 62  DGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGD 121

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKW 580
                 P  VEAL    V  I CG+  TA +     L+ W
Sbjct: 122 EAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTW 161


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/323 (37%), Positives = 180/323 (55%), Gaps = 16/323 (4%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V++WG    G+LG G  SD  HP L++AL++     ++CG  HT  +T  G +YTWG  +
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGD 62

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              G LGHG+    ++P+ L   L    V  V+CG +HTA VT +G+L+T+G G +G LG
Sbjct: 63  D--GRLGHGDNGWKFVPR-LVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

Query: 374 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
           HG+    STP  V+S+KGL   + ACG  HT  ++E            +  ++TWGD + 
Sbjct: 120 HGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLE------------NQDVYTWGDKEN 167

Query: 434 GRLGHGDKEA-RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
           G  GHGD    +  P CV+ LVE N  Q+S     T AL+  G V+T G   +G+LG   
Sbjct: 168 GVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNS 227

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
              +   +    L    ++++ACG +H A +T    V+TWG G +G+LGHGD  ++  P+
Sbjct: 228 ERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPT 287

Query: 553 LVEALKDKQVKSIVCGTSFTAAI 575
            VE+L DK +  + CG S T A+
Sbjct: 288 RVESLIDKNIIQLTCGWSHTVAL 310



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/386 (35%), Positives = 198/386 (51%), Gaps = 40/386 (10%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSAVSSS-----SQGSGH-----DDGDSLGDVFIWGECT 199
           G DG+ G   G + D +   L  A+        S GSGH     DDG     V+ WG   
Sbjct: 9   GEDGQLG--LGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGK----VYTWGR-G 61

Query: 200 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
            DG LG G +      G K   FVP+ VE      V+ + CG  H A VT  GE+++WG 
Sbjct: 62  DDGRLGHGDN------GWK---FVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGG 112

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            + G+LGHG ++  S P L++++K + V  VACG  HT  +  + D+YTWG      G+ 
Sbjct: 113 GMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKEN--GVS 170

Query: 320 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           GHG+             L  I++  +S   +HTA ++  GQ+FTFG+G FG LGH    +
Sbjct: 171 GHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERN 230

Query: 380 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
               + +D+L G R  + ACG +HTAAV E            SG +FTWG G+ G+LGHG
Sbjct: 231 QPVAKCIDALIGKRIKQVACGGFHTAAVTE------------SGHVFTWGGGEHGQLGHG 278

Query: 440 DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT 499
           DK  +++PT V +L++ N  Q++CG S TVALT  G V+T G+  +G+LG    N     
Sbjct: 279 DKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEP 338

Query: 500 RVEGKLTKNFVEEIACGDYHVAVLTS 525
           ++        V  +A  + H   L +
Sbjct: 339 KLIETFNSKRVISVASYNEHTVALVN 364


>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 591

 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 149/463 (32%), Positives = 236/463 (50%), Gaps = 37/463 (7%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           DV+ WGE T  G+LG G     +          P+ VE+ +  D++ +  G  H   +  
Sbjct: 160 DVYTWGEGT-RGMLGHGEEDPEAS---------PRVVEALLGHDIKMLCLGSGHTMALAV 209

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            GEV+SWG  LGGRLG G + D   P  +  L+  ++  +AC E+H+ AV  +G+ Y WG
Sbjct: 210 SGEVYSWGLGLGGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWG 269

Query: 311 -GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            G + + G+ G  +      P +++  L+G  V   +CG   T  V  +G+++  G+   
Sbjct: 270 RGIDGSLGVEGDKHVS----PTQIHA-LDGKRVVHAACGAAFTLFVIESGEVYACGNNEH 324

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LG G   ++S P  V +L   R VR ACG  H  A+ E            +G+L+ WG
Sbjct: 325 GQLGIGSNEAMSEPTLVTNLPE-RIVRIACGNSHAVALSE------------TGRLYAWG 371

Query: 430 DGDRGRLGHGDK-EARLVPTCVAA-LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
               G+LG G+  E RL P  V + +V  +    +CG + T+ L+ +G +Y  GS   GQ
Sbjct: 372 AHSSGQLGVGEPLEDRLSPVRVESNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQ 431

Query: 488 LG-DPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           LG  P A  N   P  +     + +   I+CG    A ++ R ++YTWG GA+  LG  D
Sbjct: 432 LGLGPLATKNQATPAALPNPEGRKYTA-ISCGQDISAAVSDRGKIYTWGSGASNALGLPD 490

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHN 604
              +  P+L+E++ DK+ +++ CG    AA  +H WV   + + C  C++ F   R+RH+
Sbjct: 491 GRTKYAPTLIESMADKRCRTVACGFFHMAATIIHGWVPDDEATQCMACKLKFTTIRRRHH 550

Query: 605 CYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKA 647
           C  CG ++C  CS+KK     +    ++  RVCD C+  L++A
Sbjct: 551 CRKCGGIFCGNCSAKKF--PLLEAGFSESVRVCDKCYVILSRA 591



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 18/227 (7%)

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           A  ++T+G+GT G+LGHG+    ++PR V++L G        G  HT A+          
Sbjct: 158 ASDVYTWGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALA--------- 208

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
               SG++++WG G  GRLG G +  R  P  +A L   +   ++C  + +VA+   G  
Sbjct: 209 ---VSGEVYSWGLGLGGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEA 265

Query: 478 YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
           Y  G  + G LG        PT++     K  V   ACG      +    EVY  G   +
Sbjct: 266 YVWGRGIDGSLGVEGDKHVSPTQIHALDGKRVVHA-ACGAAFTLFVIESGEVYACGNNEH 324

Query: 538 GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
           G+LG G  +  + P+LV  L ++ V+ I CG S   A+     L+ W
Sbjct: 325 GQLGIGSNEAMSEPTLVTNLPERIVR-IACGNSHAVALSETGRLYAW 370



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 38/49 (77%), Gaps = 1/49 (2%)

Query: 6   IFQRYPRPEKEYQSFSLIYN-DRSLDLICKDKDEAEVWFTGLKALISRS 53
           +FQ    PE E +SFS++Y  +R+LD+ICKD+ E +VW +GL+AL++R+
Sbjct: 73  VFQSNRMPEFEERSFSIVYQGNRTLDIICKDRREHDVWISGLQALVNRA 121



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G   V +    ++VYTWG+G  G LGHG+ D    P +VEAL    +K +  G+  T A+
Sbjct: 148 GSTRVLIREDASDVYTWGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMAL 207

Query: 576 CL 577
            +
Sbjct: 208 AV 209


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  206 bits (523), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/340 (38%), Positives = 187/340 (55%), Gaps = 18/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D   P  + +    ++ ++ CG  H  A    + EV+SWG    GRLGHG  SD+  PK 
Sbjct: 47  DRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKP 106

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL  + +  +ACG+ H  AVT+ G++ +WG  N N G LG G      +P+K+    E
Sbjct: 107 IKALHGLKIRQIACGDSHCLAVTMEGEVQSWG-RNQN-GQLGLGTTEDSLVPQKIQ-AFE 163

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           GI +  V+ G  HTA VT  G+LF +G G +G LG GDR     P++V S+ G + V  A
Sbjct: 164 GISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVA 223

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT +V             S G L+T+G    G+LGHGD E RLVP  + AL   N 
Sbjct: 224 CGWRHTISV------------SSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNI 271

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            Q+S G   T+ALTT G +Y  G   +GQ+G     +   P +++    +  ++ I+CG 
Sbjct: 272 SQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQ-ISCGW 330

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   +T +  V++WG+G NG+LGHG++ DRN P ++EAL
Sbjct: 331 RHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEAL 370



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/340 (33%), Positives = 170/340 (50%), Gaps = 18/340 (5%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H+  +     V SWG    G+LGHG   D   P  + AL    +  V CG  HT
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 72

Query: 298 CAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A +++  ++Y+WG  +  FG LGHGN   L  PK +   L G+ +  ++CG  H   VT
Sbjct: 73  TAYSVARTEVYSWGWGD--FGRLGHGNSSDLLTPKPIK-ALHGLKIRQIACGDSHCLAVT 129

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG G       P+++ + +G+     A G  HTAAV E       
Sbjct: 130 MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTE------- 182

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 G+LF WG G  G LG GD+  RLVP  V+++       V+CG   T+++++ G 
Sbjct: 183 -----DGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGG 237

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +YT G   YGQLG      +L P R+E  L  + + +I+ G  H   LT+  ++Y WG  
Sbjct: 238 LYTYGWSKYGQLGHGDFEDRLVPHRLE-ALRGDNISQISGGWRHTMALTTDGKLYGWGWN 296

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G++G GD  D   P  ++  +D++V  I CG   T A+
Sbjct: 297 KFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAV 336



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 180/374 (48%), Gaps = 43/374 (11%)

Query: 131 KVLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRVSLSSA-----VSSSS 178
           +VL  S  A  SV  LS         G DG+ GH  G + D    +  SA     + S +
Sbjct: 9   RVLFISAGASHSVALLSGNIVCSWGRGEDGQLGH--GDAEDRLSPTQLSALDGHEIVSVT 66

Query: 179 QGSGHDDGDSLG--DVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDV 235
            G+ H    S+   +V+ WG   GD G LG          G   D   PK +++   L +
Sbjct: 67  CGADHTTAYSVARTEVYSWG--WGDFGRLG---------HGNSSDLLTPKPIKALHGLKI 115

Query: 236 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
           + IACG  H   VT +GEV SWG    G+LG G   D   P+ I A + I++++VA G  
Sbjct: 116 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAE 175

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           HT AVT  G+++ WG     +G LG G+     +P+K++  ++G  +  V+CG  HT  V
Sbjct: 176 HTAAVTEDGELFGWGWG--RYGNLGLGDRNDRLVPQKVS-SVDGDKMVMVACGWRHTISV 232

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           +S G L+T+G   +G LGHGD      P  +++L+G    + + G  HT A+        
Sbjct: 233 SSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALT------- 285

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                + GKL+ WG    G++G GD      P  +    +    Q+SCG   T+A+T   
Sbjct: 286 -----TDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQ 340

Query: 476 HVYTMGSPVYGQLG 489
           +V++ G    GQLG
Sbjct: 341 NVFSWGRGTNGQLG 354



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACG-DY 518
           +S G S +VAL +   V + G    GQLG   A  +L PT++   L  + +  + CG D+
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS-ALDGHEIVSVTCGADH 71

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
             A   +RTEVY+WG G  GRLGHG++ D   P  ++AL   +++ I CG S   A+ +
Sbjct: 72  TTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTM 130


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 136/387 (35%), Positives = 200/387 (51%), Gaps = 26/387 (6%)

Query: 195  WGECTGDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQG 252
            WG   G G I G G +  G   G++     VP A+ES   L    I  G +    VT  G
Sbjct: 3177 WG---GSGTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADG 3233

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG 310
            ++++ G    GRLG G    VS P L++++++++++ VA   G  H  A+++ G++Y+WG
Sbjct: 3234 KLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWG 3293

Query: 311  -GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
             G +   G LGHGN      P+ +   L G  V  ++CG  H+A VTS+G+L+T+G G +
Sbjct: 3294 EGED---GKLGHGNRTQCDRPRVIES-LRGKEVIDIACGGAHSACVTSSGELYTWGKGRY 3349

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG--KLFT 427
            G LGHGD      P+  D+LKG R +  ACG               S + C S    +++
Sbjct: 3350 GRLGHGDSEDQLRPKMADALKGYRVIDVACG------------SGDSQTLCISDDDNVWS 3397

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGDGD G+LG G  +   VP  V AL     C+V CG   ++ALT +G VYT G   Y +
Sbjct: 3398 WGDGDYGKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHR 3457

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            LG    +     R    L    +  IA G  H    + + EVYTWG    G+LG G T+ 
Sbjct: 3458 LGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNA 3517

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P +V AL+DK++ ++ CG++ T A
Sbjct: 3518 IQRPRIVTALQDKKITNVACGSAHTVA 3544



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 199/405 (49%), Gaps = 30/405 (7%)

Query: 176  SSSQGSGHDDGDS---LGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
            SS Q S  D G S      VF+WG    D +        G   G K+ +  P   E    
Sbjct: 2189 SSRQRSAGDHGGSREIQTKVFVWGLNDKDQL--------GGPRGSKIKT--PVLNEFLSS 2238

Query: 233  LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
            L V   A G +   +VT +G+V++ GE   GRLG G   +V  PK ++ L    V+ VA 
Sbjct: 2239 LKVVCCAGGSKSLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAV 2298

Query: 293  --GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
              G  H  A+T+ G +++WG    + G LGH + M+   P+ L   L+   +  ++CG  
Sbjct: 2299 HSGGRHAMALTVDGKVFSWG--EGDDGKLGHLSRMNCEKPRLLEA-LKTKRIRDIACGSS 2355

Query: 351  HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            H+A VTS+G+L+T+G G +G LGHGD  +   P+ V +L G R ++ ACG          
Sbjct: 2356 HSAAVTSSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACG---------- 2405

Query: 411  MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
               + + +    G +++WGDGD G+LG G  E   VP  V  L      Q+ CG   ++A
Sbjct: 2406 SRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLA 2465

Query: 471  LTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
            LT  G V+T G   Y +LG    ++ + P   EG   K  +  +A G  H   +T   +V
Sbjct: 2466 LTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKII-HVAVGALHCLAVTDTGQV 2524

Query: 530  YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            + WG   +G+ G G T     P+LV+ L+  ++  + CG+S + A
Sbjct: 2525 FAWGDNDHGQQGDGSTTVNKKPALVQGLEGVRITRVACGSSHSTA 2569



 Score =  166 bits (420), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 170/340 (50%), Gaps = 21/340 (6%)

Query: 241  GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
             G H      Q +VF WG     +LG    S +  P L + L ++ V   A G      V
Sbjct: 2195 AGDHGGSREIQTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVV 2254

Query: 301  TLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHTAVVTSA 358
            T  G +Y  G G+N   G LG G+  ++ +PK++NG  + +    +V  G  H   +T  
Sbjct: 2255 TAEGKVYACGEGTN---GRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVD 2311

Query: 359  GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AAV           
Sbjct: 2312 GKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVT---------- 2361

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGH 476
              SSG+L+TWG G+ GRLGHGD   +L P  V ALV     QV+CG   + T+ LT  G 
Sbjct: 2362 --SSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGM 2419

Query: 477  VYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VY+ G   +G+LG   + G  +P  VE +L    V +I CG      LT   +V+TWGKG
Sbjct: 2420 VYSWGDGDFGKLGRGGSEGCSVPHNVE-RLNGQGVIQIECGAQFSLALTKAGQVWTWGKG 2478

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               RLGHG       P + E LK K++  +  G     A+
Sbjct: 2479 DYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAV 2518



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 103/286 (36%), Positives = 147/286 (51%), Gaps = 25/286 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG          G +     P+ +ES    +V +IACGG H+A VT
Sbjct: 3287 GEVYSWGEGE-DGKLG---------HGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVT 3336

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              GE+++WG+   GRLGHG   D   PK+ DALK   V  VACG   +  + +S D   W
Sbjct: 3337 SSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVW 3396

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
               + ++G LG G      +P+K++  L  I V  V CG   +  +T +G ++T+G G +
Sbjct: 3397 SWGDGDYGKLGRGGSDGCKVPQKVDA-LSSIGVCKVECGSQFSIALTKSGCVYTWGKGDY 3455

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTW 428
              LGHG    V  PR+V +L+G + +  A G  H  A             CS  G+++TW
Sbjct: 3456 HRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVA-------------CSDQGEVYTW 3502

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            GD D G+LG G   A   P  V AL +     V+CG + TVA +T+
Sbjct: 3503 GDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTS 3548



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 146/298 (48%), Gaps = 28/298 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG   H S      +M+   P+ +E+     +++IACG  H+A VT
Sbjct: 2312 GKVFSWGE-GDDGKLG---HLS------RMNCEKPRLLEALKTKRIRDIACGSSHSAAVT 2361

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS--GDMY 307
              GE+++WG    GRLGHG  +    PKL+ AL    V  VACG      +TL+  G +Y
Sbjct: 2362 SSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVY 2421

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G      +P  +   L G  V  + CG   +  +T AGQ++T+G G
Sbjct: 2422 SWG--DGDFGKLGRGGSEGCSVPHNVER-LNGQGVIQIECGAQFSLALTKAGQVWTWGKG 2478

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  P+  + LKG + +  A G  H  AV +            +G++F 
Sbjct: 2479 DYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTD------------TGQVFA 2526

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPV 484
            WGD D G+ G G       P  V  L      +V+CG S + A  TT   + +M  PV
Sbjct: 2527 WGDNDHGQQGDGSTTVNKKPALVQGLEGVRITRVACGSSHSTAWATTDTAIPSMHEPV 2584



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 19/287 (6%)

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            SG +Y WG ++   G LG      + +P  +   L  +    +  G      VT+ G+L+
Sbjct: 3180 SGTIYGWGHNH--RGQLGGIEGAKVKVPTAIES-LTSLRPIQIVGGEQTLFAVTADGKLY 3236

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
              G G  G LG G   SVSTP  ++S++ +          H   V     G  + +    
Sbjct: 3237 ATGYGASGRLGIGGTDSVSTPTLLESIQHV----------HIKKVAVNSGGKHALALSVE 3286

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
            G++++WG+G+ G+LGHG++     P  + +L       ++CG + +  +T++G +YT G 
Sbjct: 3287 GEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGK 3346

Query: 483  PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANGRL 540
              YG+LG   +  +L  ++   L    V ++ACG  D     ++    V++WG G  G+L
Sbjct: 3347 GRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKL 3406

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 583
            G G +D    P  V+AL    V  + CG+ F+ A+    C++ W  G
Sbjct: 3407 GRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKG 3453



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV--PKAVESAVVLDVQNIACGGRHAAL 247
            G V+ WG+        G  HR G  +    D  V  P+ V +     + +IA G  H   
Sbjct: 3445 GCVYTWGK--------GDYHRLGHGS----DDHVRRPRKVAALQGKKIISIATGSLHCVA 3492

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
             + QGEV++WG+   G+LG G  + +  P+++ AL++  +  VACG  HT A + S  ++
Sbjct: 3493 CSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTSKPLH 3552



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 14/100 (14%)

Query: 382 TPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
           TP+ V  LK  + V  A G     T AV +            +G LF++G+GD G+LG G
Sbjct: 7   TPKLVSGLKEQKFVHIALGSNDGQTLAVTD------------TGLLFSFGNGDYGKLGRG 54

Query: 440 DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
             +   +P  V  L   +     CG+  +V LT TG VYT
Sbjct: 55  GSDGCKLPKLVDKLQGQHAVIACCGNQFSVILTKTGTVYT 94



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 440 DKEARLVPTCVAALVEPNFCQVSCGHS--LTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
           + + +L P  V+ L E  F  ++ G +   T+A+T TG +++ G+  YG+LG   ++G K
Sbjct: 1   NSDDQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCK 60

Query: 497 LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
           LP  V+ KL         CG+    +LT    VYT
Sbjct: 61  LPKLVD-KLQGQHAVIACCGNQFSVILTKTGTVYT 94



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 27/50 (54%)

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            T  VT  G LF+FG+G +G LG G       P+ VD L+G   V A CG
Sbjct: 30  QTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVDKLQGQHAVIACCG 79



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 276 PKLIDALKNINVELVACGEH--HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
           PKL+  LK      +A G +   T AVT +G ++++G  N ++G LG G      LP KL
Sbjct: 8   PKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFG--NGDYGKLGRGGSDGCKLP-KL 64

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
              L+G H     CG   + ++T  G ++T
Sbjct: 65  VDKLQGQHAVIACCGNQFSVILTKTGTVYT 94



 Score = 43.1 bits (100), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 14/130 (10%)

Query: 498 PTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
           P  V G   + FV  IA G  D     +T    ++++G G  G+LG G +D    P LV+
Sbjct: 8   PKLVSGLKEQKFVH-IALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVD 66

Query: 556 ALKDKQVKSIVCGTSFTAAI--------CL-HKWVSGVDQSMCSGCRIPFNFKRKRHNCY 606
            L+ +      CG  F+  +        CL   W S    S+  G  +PF+    R    
Sbjct: 67  KLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAWTSSAHWSV--GLHVPFSVDVTRTTFE 124

Query: 607 NCGLVYCHTC 616
              L+    C
Sbjct: 125 KLDLLLQRVC 134



 Score = 42.7 bits (99), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGR--HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           D   PK V         +IA G        VT  G +FS+G    G+LG G       PK
Sbjct: 4   DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPK 63

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           L+D L+  +  +  CG   +  +T +G +YT
Sbjct: 64  LVDKLQGQHAVIACCGNQFSVILTKTGTVYT 94



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 19/149 (12%)

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC---GDYHVAVLTSRTEVYTWG 533
            V+  G     QLG P+ + K+ T V  +   +   ++ C   G   + V+T+  +VY  G
Sbjct: 2208 VFVWGLNDKDQLGGPRGS-KIKTPVLNEFLSSL--KVVCCAGGSKSLFVVTAEGKVYACG 2264

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL------HKWVSGVDQS 587
            +G NGRLG G + + + P  V  L    VK +   +    A+ L        W  G D  
Sbjct: 2265 EGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 2324

Query: 588  M-------CSGCRIPFNFKRKRHNCYNCG 609
            +       C   R+    K KR     CG
Sbjct: 2325 LGHLSRMNCEKPRLLEALKTKRIRDIACG 2353


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/366 (36%), Positives = 196/366 (53%), Gaps = 32/366 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V +IACG  H  +VT+ G +F++G    G+LG G +   + P  + ALK   +  VA G 
Sbjct: 37  VTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGR 96

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT AVT S  +Y++G GS    G LGHG+E  L +P  +   LE   V+ ++CG +H+A
Sbjct: 97  FHTLAVTDSNKLYSFGQGSE---GALGHGDETDLNMPTSIE-SLEDKDVNIIACGGYHSA 152

Query: 354 VVTSAGQLFTFGDGTFGVLG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            +T  G+L+ +G  + G LG   D IS  T  ++    G   +  ACG +HTA V     
Sbjct: 153 AITKNGELYIWGSNSEGQLGLKNDTISYPTMLDL----GKSVISVACGYYHTAVVT---- 204

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQVSCGHSLTVA 470
                   + GKL+T+G+ + G+LG GD EA  V  P  V   +     +V+CG + TVA
Sbjct: 205 --------ADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKG-ISGKVVKVACGGNHTVA 255

Query: 471 LTTTGHVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           LT +G VYT GS   GQ  LG    +  +P  VE  L+K  ++ IACG+ H AV++ + E
Sbjct: 256 LTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEA-LSKRKIKHIACGESHTAVVSDKGE 314

Query: 529 VYTWGKGANGRLGHGDTDDRNF--PSLVEALKDKQVKSIVCGTSFTAAIC--LHKWVSGV 584
           ++T+G G +G+LG GD    N   P  V+ LK+  V  I CG   T   C  + K  +G 
Sbjct: 315 LFTFGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACNKIDKLANGD 374

Query: 585 DQSMCS 590
           D +  S
Sbjct: 375 DDNESS 380



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 181/330 (54%), Gaps = 36/330 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     + ++A G  H   VT   +++S+G+   G LGHG ++D++ P  I++L+
Sbjct: 78  PTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLE 137

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           + +V ++ACG +H+ A+T +G++Y W GSN   G LG  N+ ++  P  L+    G  V 
Sbjct: 138 DKDVNIIACGGYHSAAITKNGELYIW-GSNSE-GQLGLKND-TISYPTMLD---LGKSVI 191

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS--VSTPREVDSLKGLRTVRAACGV 401
           SV+CG +HTAVVT+ G+L+TFG+   G LG GD  +  V+ P+ V  + G + V+ ACG 
Sbjct: 192 SVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISG-KVVKVACGG 250

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQ 460
            HT A+             +SG+++T+G G  G+LG G K     +P  V AL +     
Sbjct: 251 NHTVALT------------ASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKH 298

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGD 517
           ++CG S T  ++  G ++T G   +G+LG   +  +N   P +V+ +L +  V  IACG 
Sbjct: 299 IACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQ-RLKEFIVLHIACGG 357

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            H  V  ++ +          +L +GD D+
Sbjct: 358 CHTIVACNKID----------KLANGDDDN 377



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 136/257 (52%), Gaps = 20/257 (7%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G + D  +P ++ES    DV  IACGG H+A +TK GE++ WG    G+LG   D+ +S+
Sbjct: 122 GDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKNDT-ISY 180

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P ++D  K  +V  VACG +HT  VT  G +YT+G +      LG      +  PK + G
Sbjct: 181 PTMLDLGK--SVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKG 238

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST-PREVDSLKGLRT 394
            + G  V  V+CG  HT  +T++GQ++TFG G  G LG G +I  S  P+ V++L   + 
Sbjct: 239 -ISG-KVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKI 296

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR--LVPTCVAA 452
              ACG  HTA V +             G+LFT+GDG  G+LG GD+       P  V  
Sbjct: 297 KHIACGESHTAVVSD------------KGELFTFGDGRHGKLGQGDESFSNLFKPVKVQR 344

Query: 453 LVEPNFCQVSCGHSLTV 469
           L E     ++CG   T+
Sbjct: 345 LKEFIVLHIACGGCHTI 361


>gi|308808460|ref|XP_003081540.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116060005|emb|CAL56064.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 937

 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 148/412 (35%), Positives = 207/412 (50%), Gaps = 43/412 (10%)

Query: 197 ECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFS 256
           E   + + GGG   + S    ++D+  P A+E    LDV  I+ G RH    T+ G V+S
Sbjct: 212 ESAVESVSGGGFA-AKSERWTRVDA--PSAIEGMETLDVVEISIGARHTLARTRTGAVYS 268

Query: 257 WGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 316
           WGE  GG+LG     D   P  +D L    V L +CG  H+ AV + G+++ WG  N   
Sbjct: 269 WGEGKGGKLGIPSGQDFDRPTRVD-LDGRAVAL-SCGSAHSVAV-VEGEVFAWGDPNAAP 325

Query: 317 GLLGHGNEMS-LWLPKKLNGPLEGIHVSS----------------VSCGPWHTAVVTSAG 359
           GLLG  +  S +W P K+  P     +S+                VSCGP HTA VT  G
Sbjct: 326 GLLGLSDVRSVMWFPGKILFPSATGTLSAHRGARSLGGGGVKVVQVSCGPCHTACVTETG 385

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV--RAACGVWHTAA--------VVE 409
             +T+G+G+F  LGHGDR S   PR++++    R V  R +CGVWHTAA        VV 
Sbjct: 386 ACYTWGEGSFFALGHGDRESSREPRKLETFTRERRVVLRVSCGVWHTAAIVAASGSSVVR 445

Query: 410 VMVGSSSSSNCSS--GKLFTWGDGDRGRLGHGDKEARLVPTCVA-ALVEP--NFCQVSCG 464
           V V ++  S   S  G+LFTWGDG+ G+LG  D     VPT  +  L EP    C VSCG
Sbjct: 446 VPVPTNEESEFDSVDGELFTWGDGETGQLGIRDSTEAPVPTKTSNRLGEPGSEVCSVSCG 505

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
              TVALT+ G ++  G    G++ +           + +     V  +A G+ HV   T
Sbjct: 506 QHHTVALTSQGDLWLAG--CVGKVDNSLRTTTFTRLTDFE--TGSVRTVASGENHVVAST 561

Query: 525 SRTEVYTWGKGANGRLGHGDTD-DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               V++WG G NGRLG G  D D+  P  +  ++ ++V  I CG + +A +
Sbjct: 562 RDARVFSWGVGKNGRLGLGRNDRDQPVPQEIVNMRGREVLHIACGPTSSACV 613



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 141/356 (39%), Gaps = 63/356 (17%)

Query: 152 DGRTGHLKGLSGDTF----RVSLSSAVSSSSQGSGHDDGDSLGDVFIWGE-CTGDGILGG 206
           +G+ G L   SG  F    RV L     + S GS H      G+VF WG+     G+LG 
Sbjct: 271 EGKGGKLGIPSGQDFDRPTRVDLDGRAVALSCGSAHSVAVVEGEVFAWGDPNAAPGLLGL 330

Query: 207 GIHRSGSYAGVKMDSFVPKAVES-----------AVVLDVQNIACGGRHAALVTKQGEVF 255
              RS  +   K+    P A  +              + V  ++CG  H A VT+ G  +
Sbjct: 331 SDVRSVMWFPGKI--LFPSATGTLSAHRGARSLGGGGVKVVQVSCGPCHTACVTETGACY 388

Query: 256 SWGEELGGRLGHGVDSDVSHPKLIDALKNIN--VELVACGEHHTCAV------------- 300
           +WGE     LGHG       P+ ++        V  V+CG  HT A+             
Sbjct: 389 TWGEGSFFALGHGDRESSREPRKLETFTRERRVVLRVSCGVWHTAAIVAASGSSVVRVPV 448

Query: 301 ---------TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL--EGIHVSSVSCGP 349
                    ++ G+++TWG  +   G LG  +     +P K +  L   G  V SVSCG 
Sbjct: 449 PTNEESEFDSVDGELFTWG--DGETGQLGIRDSTEAPVPTKTSNRLGEPGSEVCSVSCGQ 506

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            HT  +TS G L+    G  G + +  R +  T         +RTV  A G  H  A   
Sbjct: 507 HHTVALTSQGDLWLA--GCVGKVDNSLRTTTFTRLTDFETGSVRTV--ASGENHVVA--- 559

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCG 464
                    +    ++F+WG G  GRLG G +   + VP  +  +       ++CG
Sbjct: 560 ---------STRDARVFSWGVGKNGRLGLGRNDRDQPVPQEIVNMRGREVLHIACG 606



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 949  WVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSM 1005
            + E+ E GV++TL  + G    LKRVRFS++ FS + A QWW  NR R+    ++++
Sbjct: 880  FTEEVEEGVFMTL-EVHGDKTILKRVRFSKRIFSNELARQWWEENRDRLTSDLDLTI 935


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/342 (37%), Positives = 187/342 (54%), Gaps = 20/342 (5%)

Query: 220 DSFVPKAVE--SAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
           D  VP  +    A    + ++ CG  H  A    + +V+SWG    GRLGHG  SDV  P
Sbjct: 61  DRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTP 120

Query: 277 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
           + + AL+ I ++ +ACG+ H  AVT++G++ +WG  N N G LG G      LP+K+   
Sbjct: 121 QPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWG-RNQN-GQLGLGTTEDSLLPQKIQ-S 177

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
            EG+ V  ++ G  HTA VT  G L+ +G G +G LG GDR     P +V S++G + V 
Sbjct: 178 FEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVL 237

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
            ACG  HT  V             SSG L+T+G    G+LGHGD E  LVP  + AL + 
Sbjct: 238 IACGWRHTITV------------SSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDS 285

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIAC 515
           +  Q+S G   T+ALT+ G +Y  G   +GQ+G    +    P +V+    +  V ++AC
Sbjct: 286 SISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQK-VAQVAC 344

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
           G  H    T +  V++WG+G +G+LGHG+  DRN P +++AL
Sbjct: 345 GWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDAL 386



 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 174/354 (49%), Gaps = 24/354 (6%)

Query: 230 AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI--NV 287
           AVVL    ++ G  H+  +     + SWG    G+LGHG   D   P ++         +
Sbjct: 23  AVVL----VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGI 78

Query: 288 ELVACGEHHTCAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
             V CG  HT A +     +Y+WG  +  FG LGHGN   ++ P+ +   L+GI +  ++
Sbjct: 79  TSVICGADHTTAYSEDEQQVYSWGWGD--FGRLGHGNSSDVFTPQPVKA-LQGIKIKQIA 135

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
           CG  H   VT AG++ ++G    G LG G       P+++ S +G+     A G  HTAA
Sbjct: 136 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAA 195

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
           V E             G L+ WG G  G LG GD+  RLVP  V+++       ++CG  
Sbjct: 196 VTE------------DGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWR 243

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            T+ ++++G +YT G   YGQLG       L P ++E  L  + + +I+ G  H   LTS
Sbjct: 244 HTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDSSISQISGGWRHTMALTS 302

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK 579
             ++Y WG    G++G GDTDD  FP  V+  +D++V  + CG   T A    K
Sbjct: 303 DGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKK 356



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 178/377 (47%), Gaps = 43/377 (11%)

Query: 129 PPKVLLPSESACGSVNSLSSG-------GSDGRTGHLKG--------LSG-DTFRVSLSS 172
           PP V+L S  A  SV  L+         G DG+ GH           LSG D     ++S
Sbjct: 21  PPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITS 80

Query: 173 AVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
            +  +   + + + +    V+ WG         G   R G   G   D F P+ V++   
Sbjct: 81  VICGADHTTAYSEDEQ--QVYSWGW--------GDFGRLGH--GNSSDVFTPQPVKALQG 128

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           + ++ IACG  H   VT  GEV SWG    G+LG G   D   P+ I + + + V+++A 
Sbjct: 129 IKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAA 188

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G  HT AVT  GD+Y WG     +G LG G+     +P+K++  +EG  +  ++CG  HT
Sbjct: 189 GAEHTAAVTEDGDLYGWGWG--RYGNLGLGDRNDRLVPEKVS-SVEGEKMVLIACGWRHT 245

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             V+S+G L+T+G   +G LGHGD      P ++++LK     + + G  HT A+     
Sbjct: 246 ITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALT---- 301

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   S GKL+ WG    G++G GD +    P  V    +    QV+CG   T+A T
Sbjct: 302 --------SDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFT 353

Query: 473 TTGHVYTMGSPVYGQLG 489
              +V++ G    GQLG
Sbjct: 354 EKKNVFSWGRGTSGQLG 370



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEG-KLTKNFVEEI 513
           P    VS G S +VAL     + + G    GQLG   A  +L PT + G       +  +
Sbjct: 22  PAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSV 81

Query: 514 ACG-DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
            CG D+  A      +VY+WG G  GRLGHG++ D   P  V+AL+  ++K I CG S  
Sbjct: 82  ICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHC 141

Query: 573 AAICL 577
            A+ +
Sbjct: 142 LAVTM 146


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/345 (37%), Positives = 185/345 (53%), Gaps = 28/345 (8%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D  VP  +       + ++ CG  H  A    + +V+SWG    GRLGHG  +DV  P+ 
Sbjct: 53  DRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQP 112

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           + AL+ I ++ +ACG+ H  AVT++G++ +WG  N N G LG G      LP+ +    E
Sbjct: 113 VKALQGIKIKQLACGDSHCLAVTMAGEVLSWG-RNQN-GQLGLGTTEDSLLPQTIQA-FE 169

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           GI V  ++ G  HTA VT  G ++ +G G +G LG GDR     P +V S++G + V  A
Sbjct: 170 GISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVA 229

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT  V             SSG L+T+G    G+LGHGD E  LVP  V AL + + 
Sbjct: 230 CGWRHTITV------------SSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSST 277

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEE----- 512
            Q+S G   T+ALT+ G +Y  G   +GQ+G    A+   P +V      NF EE     
Sbjct: 278 SQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQV------NFPEEQKVAQ 331

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
           +ACG  H    T +  V+ WG+G +G+LGHG+  DRN P +++AL
Sbjct: 332 VACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 376



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 188/388 (48%), Gaps = 42/388 (10%)

Query: 116 LDKALSDAVLYAAPPKVLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRV 168
           +D ALS AV   APP V+L S  A  SV  L+         G DG+ GH  G + D    
Sbjct: 1   MDAALS-AVADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGH--GDAEDRLVP 57

Query: 169 SLSSA-----VSSSSQGSGHDDGDSLGD--VFIWGECTGDGILGGGIHRSGSYAGVKMDS 221
           ++ S      ++S   G+ H    S  +  V+ WG         G   R G   G   D 
Sbjct: 58  TVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGW--------GDFGRLGH--GNSTDV 107

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P+ V++   + ++ +ACG  H   VT  GEV SWG    G+LG G   D   P+ I A
Sbjct: 108 FTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQA 167

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            + I+V+++A G  HT AVT  GD+Y WG     +G LG G+    ++P+K++  +EG  
Sbjct: 168 FEGISVKMIAAGAEHTAAVTEDGDIYGWGWG--RYGNLGLGDRNDRFVPEKVS-SVEGDK 224

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           +  V+CG  HT  V+S+G L+T+G   +G LGHGD      P +V++LK   T + + G 
Sbjct: 225 MVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGW 284

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HT A+             S GKL+ WG    G++G GD      P  V    E    QV
Sbjct: 285 RHTMALT------------SDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQV 332

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           +CG   T+A T   +V+  G    GQLG
Sbjct: 333 ACGWRHTLAFTEKKNVFAWGRGTSGQLG 360



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 170/361 (47%), Gaps = 22/361 (6%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
           S V      AVVL    ++ G  H+  +     + +WG    G+LGHG   D   P +I 
Sbjct: 6   SAVADEAPPAVVL----VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVIS 61

Query: 281 ALKNINVELVACGEHHTCAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
                 +  V CG  HT A +     +Y+WG  +  FG LGHGN   ++ P+ +   L+G
Sbjct: 62  GFDAPGITSVICGADHTTAYSEDEHQVYSWGWGD--FGRLGHGNSTDVFTPQPVKA-LQG 118

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           I +  ++CG  H   VT AG++ ++G    G LG G       P+ + + +G+     A 
Sbjct: 119 IKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAA 178

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           G  HTAAV E             G ++ WG G  G LG GD+  R VP  V+++      
Sbjct: 179 GAEHTAAVTE------------DGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMV 226

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDY 518
            V+CG   T+ ++++G +YT G   YGQLG       L P +VE  L  +   +I+ G  
Sbjct: 227 LVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSSTSQISGGWR 285

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
           H   LTS  ++Y WG    G++G GD  D   P+ V   ++++V  + CG   T A    
Sbjct: 286 HTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEK 345

Query: 579 K 579
           K
Sbjct: 346 K 346



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 162/351 (46%), Gaps = 29/351 (8%)

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           V LV+ G  H+ A+     + TWG      G LGHG+     +P  ++G  +   ++SV 
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWG--RGEDGQLGHGDAEDRLVPTVISG-FDAPGITSVI 72

Query: 347 CGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 405
           CG  HT A      Q++++G G FG LGHG+   V TP+ V +L+G++  + ACG  H  
Sbjct: 73  CGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCL 132

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
           AV              +G++ +WG    G+LG G  E  L+P  + A    +   ++ G 
Sbjct: 133 AVT------------MAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGA 180

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             T A+T  G +Y  G   YG LG    N +        +  + +  +ACG  H   ++S
Sbjct: 181 EHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSS 240

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW- 580
              +YT+G    G+LGHGD +D   P  VEALKD     I  G   T A+     L+ W 
Sbjct: 241 SGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWG 300

Query: 581 -------VSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKA 624
                   +G +   CS  ++ F  ++K      CG  +    + KK+V A
Sbjct: 301 WNKFGQVGAGDNADHCSPAQVNFPEEQKVAQV-ACGWRHTLAFTEKKNVFA 350


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/340 (37%), Positives = 182/340 (53%), Gaps = 17/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D  +P+ + +    ++  +ACG  H  A    +  ++SWG    GRLGHG  SD+  P  
Sbjct: 44  DRLLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHP 103

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL+ + +  +ACG+ H  AVT  G++Y+WG  N N G LG G+     +P KL    E
Sbjct: 104 IKALQGLEIRQIACGDSHCLAVTADGEVYSWG-RNQN-GQLGLGDTDDSLVPHKLL-AFE 160

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ V  ++ G  HTA VT +G+L+ +G G +G LG GDR     P EV ++   +    A
Sbjct: 161 GVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVA 220

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT AV +            SGKL+T+G    G+LGHGD    L+P  VAAL E N 
Sbjct: 221 CGWRHTIAVSQ------------SGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNI 268

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGD 517
            QVS G   TVALT  G +Y  G   +GQ+G    +    P  +        V +++CG 
Sbjct: 269 TQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGW 328

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   +T +  VY+WG+G +G+LGHGD  DR+ P  ++AL
Sbjct: 329 RHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 141/296 (47%), Gaps = 28/296 (9%)

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFG-----LLGHGNEMSLWLPKKLNGPLEGIH 341
           V LV+ G  HT A+ LSG +       C+FG      LGHG+     LP+ + G L    
Sbjct: 7   VLLVSAGASHTVAL-LSGQVV------CSFGRGEDGQLGHGDAEDRLLPRII-GALNDCE 58

Query: 342 VSSVSCGPWHTAVVTSAG-QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
           +S V+CG  HT   ++    ++++G G FG LGHG+   +  P  + +L+GL   + ACG
Sbjct: 59  ISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACG 118

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             H  AV             + G++++WG    G+LG GD +  LVP  + A    +   
Sbjct: 119 DSHCLAVT------------ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKM 166

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
           ++ G   T A+T +G +Y  G   YG LG   + +  LP  V     +     +ACG  H
Sbjct: 167 LAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCM-VACGWRH 225

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              ++   ++YT+G    G+LGHGD  D   P  V AL +  +  +  G   T A+
Sbjct: 226 TIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVAL 281


>gi|449476265|ref|XP_004154689.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 171

 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 105/183 (57%), Positives = 126/183 (68%), Gaps = 24/183 (13%)

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
           +V    E FSWGEE GGRLGHG +SD  HPKLIDAL N+ VELVACGE HTCAVTLS D+
Sbjct: 6   VVEHFSEFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLSNDL 65

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           YTWG    N  +LGHGN+ S W+P+++                  TA+V  AG+LF    
Sbjct: 66  YTWGDGTYN-SVLGHGNDASHWIPRRV------------------TALVICAGKLF---- 102

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            TFG LGH DR S+S  +EV+SLKGLRT RAACGVWHT AV+EV++G+ + +N S GKLF
Sbjct: 103 -TFGALGHKDRDSISISKEVESLKGLRTARAACGVWHTIAVLEVIIGNPNWNNNSLGKLF 161

Query: 427 TWG 429
           TWG
Sbjct: 162 TWG 164



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 48/192 (25%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           +   + F WGE  G  +  GG          + D+  PK +++   L V+ +ACG  H  
Sbjct: 8   EHFSEFFSWGEEYGGRLGHGG----------ESDAHHPKLIDALSNLKVELVACGECHTC 57

Query: 247 LVTKQGEVFSWGE-ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            VT   ++++WG+      LGHG D+    P+ + AL                 V  +G 
Sbjct: 58  AVTLSNDLYTWGDGTYNSVLGHGNDASHWIPRRVTAL-----------------VICAGK 100

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV---------- 355
           ++T       FG LGH +  S+ + K++   L+G+  +  +CG WHT  V          
Sbjct: 101 LFT-------FGALGHKDRDSISISKEVE-SLKGLRTARAACGVWHTIAVLEVIIGNPNW 152

Query: 356 --TSAGQLFTFG 365
              S G+LFT+G
Sbjct: 153 NNNSLGKLFTWG 164



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 13/102 (12%)

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           VV    + F++G+   G LGHG       P+ +D+L  L+    ACG  HT AV      
Sbjct: 6   VVEHFSEFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVT----- 60

Query: 414 SSSSSNCSSGKLFTWGDGDRGR-LGHGDKEARLVPTCVAALV 454
                   S  L+TWGDG     LGHG+  +  +P  V ALV
Sbjct: 61  -------LSNDLYTWGDGTYNSVLGHGNDASHWIPRRVTALV 95



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 25/154 (16%)

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           + F+WG+   GRLGHG +     P  + AL       V+CG   T A+T +  +YT G  
Sbjct: 12  EFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLSNDLYTWGDG 71

Query: 484 VYGQ-LGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            Y   LG    A+  +P RV                   A++    +++T+G      LG
Sbjct: 72  TYNSVLGHGNDASHWIPRRV------------------TALVICAGKLFTFGA-----LG 108

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H D D  +    VE+LK  +     CG   T A+
Sbjct: 109 HKDRDSISISKEVESLKGLRTARAACGVWHTIAV 142



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%)

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           V+   +E ++WG+   GRLGHG   D + P L++AL + +V+ + CG   T A+ L
Sbjct: 6   VVEHFSEFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTL 61


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 185/340 (54%), Gaps = 18/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D  VP  + S  V  V ++ CG  H  A    + +++SWG    GRLGHG  SDV +P+ 
Sbjct: 60  DRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQP 119

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL+ + ++ +ACG+ H   VT +G +++WG  N N G LG GN     LP+K+    E
Sbjct: 120 IVALQGMKIKQIACGDSHCLTVTFNGQVHSWG-RNQN-GQLGLGNNQDSLLPQKIKA-FE 176

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ V  ++ G  HT  +T  G L+ +G G +G LG  DR   S P +V S++G + V  A
Sbjct: 177 GVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVA 236

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  H+ +V             SSG L+T+G    G+LGHGD +  LVP  + AL +   
Sbjct: 237 CGWRHSVSV------------SSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPI 284

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            Q+S G   T+A+   G +Y  G   +GQ+G +   +   P  V     +  V+ +ACG 
Sbjct: 285 SQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQ-VACGW 343

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   LT    +++WG+GA+G+LGHG+  DRN P +++AL
Sbjct: 344 RHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDAL 383


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  199 bits (505), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 187/340 (55%), Gaps = 18/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQ-GEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D   P  + +    +V ++ CG  H    ++   +V+SWG    GRLGHG  SD+  P+ 
Sbjct: 55  DRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQP 114

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL  + ++ +ACG+ H  AVT+ G++ +WG  N N G LG G      +P+K+    +
Sbjct: 115 IKALHGLRIKQIACGDSHCLAVTMDGEVQSWG-RNQN-GQLGLGTTEDSLVPQKIQ-AFQ 171

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ V  V+ G  HTA VT  G+L+ +G G +G LG GDR     P +V +++G++ V+ A
Sbjct: 172 GVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVA 231

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT +V             SSG L+T+G    G+LGHGD E  L P  + AL E   
Sbjct: 232 CGWRHTISV------------SSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLI 279

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            ++S G   T+ALT+ G +Y  G   +GQ+G     +   P +V+    +  V  I+CG 
Sbjct: 280 SEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVH-ISCGW 338

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   +T R  V++WG+G NG+LGHG++ DRN P ++E L
Sbjct: 339 RHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVL 378



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/378 (32%), Positives = 182/378 (48%), Gaps = 22/378 (5%)

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           SA V  V  I+ G  H+  +     V SWG    G+LGHG   D   P  + AL    V 
Sbjct: 12  SAPVRRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVV 71

Query: 289 LVACGEHHTCAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 347
            V CG  HT A + S   +Y+WG  +  FG LGHGN   L+ P+ +   L G+ +  ++C
Sbjct: 72  SVTCGADHTTAYSESFTQVYSWGWGD--FGRLGHGNSSDLFTPQPIK-ALHGLRIKQIAC 128

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  H   VT  G++ ++G    G LG G       P+++ + +G+     A G  HTAAV
Sbjct: 129 GDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAV 188

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
            E             G+L+ WG G  G LG GD+  RLVP  V+ +      +V+CG   
Sbjct: 189 TE------------DGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRH 236

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           T++++++G +YT G   YGQLG       L P ++E  L +N + EI+ G  H   LTS 
Sbjct: 237 TISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLE-ALQENLISEISGGWRHTMALTSD 295

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVS 582
            ++Y WG    G++G GD  D   P  V+   +++V  I CG   T A+     +  W  
Sbjct: 296 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGR 355

Query: 583 GVDQSMCSGCRIPFNFKR 600
           G +  +  G  I  N  +
Sbjct: 356 GTNGQLGHGESIDRNIPK 373



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 188/388 (48%), Gaps = 44/388 (11%)

Query: 131 KVLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRVSLSSA-----VSSSS 178
           +VLL S  A  SV  LS         G DG+ GH  G + D    +  SA     V S +
Sbjct: 17  RVLLISAGASHSVALLSGNVVCSWGRGEDGQLGH--GDAEDRLSPTYLSALDGHEVVSVT 74

Query: 179 QGSGHDDG--DSLGDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDV 235
            G+ H     +S   V+ WG   GD G LG          G   D F P+ +++   L +
Sbjct: 75  CGADHTTAYSESFTQVYSWG--WGDFGRLG---------HGNSSDLFTPQPIKALHGLRI 123

Query: 236 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
           + IACG  H   VT  GEV SWG    G+LG G   D   P+ I A + ++V++VA G  
Sbjct: 124 KQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAE 183

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           HT AVT  G++Y WG     +G LG G+     +P+K++  +EG+ +  V+CG  HT  V
Sbjct: 184 HTAAVTEDGELYGWGWG--RYGNLGLGDRNDRLVPEKVS-TVEGVKMVKVACGWRHTISV 240

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           +S+G L+T+G   +G LGHGD     TP ++++L+       + G  HT A+        
Sbjct: 241 SSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALT------- 293

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                S GKL+ WG    G++G GD      P  V    E     +SCG   T+A+T   
Sbjct: 294 -----SDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQ 348

Query: 476 HVYTMGSPVYGQLGDPKA-NGKLPTRVE 502
           +V++ G    GQLG  ++ +  +P  +E
Sbjct: 349 NVFSWGRGTNGQLGHGESIDRNIPKMIE 376


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  199 bits (505), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 185/340 (54%), Gaps = 18/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D  VP  + S  V  V ++ CG  H  A    + +++SWG    GRLGHG  SDV +P+ 
Sbjct: 60  DRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQP 119

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL+ + ++ +ACG+ H   VT +G +++WG  N N G LG GN     LP+K+    E
Sbjct: 120 IVALQGMKIKQIACGDSHCLTVTFNGQVHSWG-RNQN-GQLGLGNNQDSLLPQKIKA-FE 176

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ V  ++ G  HT  +T  G L+ +G G +G LG  DR   S P +V S++G + V  A
Sbjct: 177 GVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVA 236

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  H+ +V             SSG L+T+G    G+LGHGD +  LVP  + AL +   
Sbjct: 237 CGWRHSVSV------------SSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPI 284

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            Q+S G   T+A+   G +Y  G   +GQ+G +   +   P  V     +  V+ +ACG 
Sbjct: 285 SQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQ-VACGW 343

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   LT    +++WG+GA+G+LGHG+  DRN P +++AL
Sbjct: 344 RHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDAL 383


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  199 bits (505), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 128/340 (37%), Positives = 181/340 (53%), Gaps = 17/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D  +P+ + +    ++  +ACG  H  A    +  ++SWG    GRLGHG  SD+  P  
Sbjct: 44  DRHLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHP 103

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL+ + +  +ACG+ H  AVT  G++Y+WG  N N G LG G+     +P KL    E
Sbjct: 104 IKALQGLEIRQIACGDSHCLAVTADGEVYSWG-RNQN-GQLGLGDTDDSLVPHKLL-AFE 160

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ V  ++ G  HTA VT  G+L+ +G G +G LG GDR     P EV ++   +    A
Sbjct: 161 GVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVA 220

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT AV +            SGKL+T+G    G+LGHGD    L+P  VAAL E N 
Sbjct: 221 CGWRHTIAVSQ------------SGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNI 268

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGD 517
            QVS G   TVALT  G +Y  G   +GQ+G    +    P  +        V +++CG 
Sbjct: 269 TQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGW 328

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   +T +  VY+WG+G +G+LGHGD  DR+ P  ++AL
Sbjct: 329 RHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 28/296 (9%)

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFG-----LLGHGNEMSLWLPKKLNGPLEGIH 341
           V LV+ G  HT A+ LSG +       C+FG      LGHG+     LP+ + G L    
Sbjct: 7   VLLVSAGASHTVAL-LSGQVV------CSFGRGEDGQLGHGDAEDRHLPRII-GALNDCE 58

Query: 342 VSSVSCGPWHTAVVTSAG-QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
           +S V+CG  HT   ++    ++++G G FG LGHG+   +  P  + +L+GL   + ACG
Sbjct: 59  ISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACG 118

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             H  AV             + G++++WG    G+LG GD +  LVP  + A    +   
Sbjct: 119 DSHCLAVT------------ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKM 166

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
           ++ G   T A+T  G +Y  G   YG LG   + +  LP  V     +     +ACG  H
Sbjct: 167 LAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCM-VACGWRH 225

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              ++   ++YT+G    G+LGHGD  D   P  V AL +  +  +  G   T A+
Sbjct: 226 TIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVAL 281


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 193/369 (52%), Gaps = 26/369 (7%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D  VP  +       + ++ CG  H  A    + +V+SWG    GRLGHG  SDV  P+ 
Sbjct: 52  DRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQP 111

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           + AL+ + ++ +ACG+ H  AVT++G++ +WG  N N G LG G      LP+K+    E
Sbjct: 112 VKALQGLKIKQIACGDSHCLAVTMAGEVQSWG-RNQN-GQLGLGTTEDSLLPQKIQA-FE 168

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
            + V  ++ G  HTA VT  G L+ +G G +G LG GDR     P +V S++G + V  A
Sbjct: 169 SVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVA 228

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT  V +            SG L+T+G    G+LGHGD E  LVP  V AL +   
Sbjct: 229 CGWRHTITVSD------------SGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTI 276

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-----DPKANGKLPTRVEGKLTKNFVEEI 513
            Q+S G   T+ALT+ G +Y  G   +GQ+G     D  + G++    + K++     ++
Sbjct: 277 SQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKIS-----QV 331

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           ACG  H   L+ +  V++WG+G +G+LG+G+  DRN P L++AL           +S  A
Sbjct: 332 ACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSDGSACKKLESSTAA 391

Query: 574 AICLHKWVS 582
                 WVS
Sbjct: 392 PFAAKVWVS 400



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 177/365 (48%), Gaps = 24/365 (6%)

Query: 219 MDSFV--PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
           MDS +  P +    VVL    ++ G  H+  +     + SWG    G+LGHG   D   P
Sbjct: 1   MDSVMAAPDSPPQTVVL----VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVP 56

Query: 277 KLIDALKNINVELVACGEHHTCAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
            ++       +  V CG  HT A +     +Y+WG  +  FG LGHGN   ++ P+ +  
Sbjct: 57  TVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGD--FGRLGHGNSSDVFTPQPVKA 114

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            L+G+ +  ++CG  H   VT AG++ ++G    G LG G       P+++ + + +   
Sbjct: 115 -LQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK 173

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
             A G  HTAAV E             G L+ WG G  G LG GD+  RL+P  V+++  
Sbjct: 174 MIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEG 221

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA 514
                V+CG   T+ ++ +G++YT G   YGQLG       L P +VE  L  + + +I+
Sbjct: 222 EKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSTISQIS 280

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G  H   LTS  ++Y WG    G++G G+ DD + P  V   +D+++  + CG   T A
Sbjct: 281 GGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLA 340

Query: 575 ICLHK 579
           +   K
Sbjct: 341 LSEKK 345



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 132/396 (33%), Positives = 196/396 (49%), Gaps = 48/396 (12%)

Query: 122 DAVLYA--APPK-VLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRVSLS 171
           D+V+ A  +PP+ V+L S  A  SV  L+         G DG+ GH  G + D    ++ 
Sbjct: 2   DSVMAAPDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGH--GDAEDRLVPTVL 59

Query: 172 S-----AVSSSSQGSGHDDGDSLGDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPK 225
           S     A++S   G+ H    S  ++ ++    GD G LG          G   D F P+
Sbjct: 60  SGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLG---------HGNSSDVFTPQ 110

Query: 226 AVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI 285
            V++   L ++ IACG  H   VT  GEV SWG    G+LG G   D   P+ I A +++
Sbjct: 111 PVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESV 170

Query: 286 NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
            V+++A G  HT AVT  GD+Y WG     +G LG G+     LP+K++  +EG  +  V
Sbjct: 171 CVKMIAAGAEHTAAVTEDGDLYGWGWG--RYGNLGLGDRNDRLLPEKVS-SVEGEKMVLV 227

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW-HT 404
           +CG  HT  V+ +G L+T+G   +G LGHGD      P +V++LK   T+    G W HT
Sbjct: 228 ACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD-STISQISGGWRHT 286

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
            A+             S GKL+ WG    G++G G+ +    P  V+   +    QV+CG
Sbjct: 287 MALT------------SEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACG 334

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTR 500
              T+AL+   +V++ G    GQLG    NG++  R
Sbjct: 335 WRHTLALSEKKNVFSWGRGTSGQLG----NGEIVDR 366


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/341 (36%), Positives = 187/341 (54%), Gaps = 18/341 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTK-QGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D   P  + +   LD+ +I CG  H    ++ + EV+SWG    GRLGHG  SD+  P+ 
Sbjct: 57  DRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQP 116

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL ++ +  +ACG+ H  AVT+ G++ +WG  N N G LG G      +P+K+    +
Sbjct: 117 IKALHSLKIRQIACGDSHCLAVTMDGEVQSWG-RNQN-GQLGLGTTEDSLVPQKIQ-AFQ 173

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ +  V+ G  HTA VT  G+L+ +G G +G LG GDR     P +V  + G + +  A
Sbjct: 174 GVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVA 233

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT +V             SSG L+T+G    G+LGHGD E  L P  V AL +   
Sbjct: 234 CGWRHTISV------------SSSGGLYTYGWSKYGQLGHGDFEDHLTPHKVEALRDSYI 281

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK-NFVEEIACG 516
             +S G   T+ALT+ G++Y  G   +GQ+G     +   P +V+    + + + +I+CG
Sbjct: 282 SMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCG 341

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
             H   +T R  V++WG+G NG+LGHG++ DRN P ++E L
Sbjct: 342 WRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEVL 382



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 176/372 (47%), Gaps = 26/372 (6%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H+  +     V SWG    G+LGHG   D   P  +  L  +++  + CG  HT
Sbjct: 23  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHT 82

Query: 298 CAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            + + S  ++Y+WG  +  FG LGHGN   L+ P+ +   L  + +  ++CG  H   VT
Sbjct: 83  TSYSESRMEVYSWGWGD--FGRLGHGNSSDLFTPQPIK-ALHSLKIRQIACGDSHCLAVT 139

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG G       P+++ + +G+     A G  HTAAV E       
Sbjct: 140 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTE------- 192

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 G+L+ WG G  G LG GD+  RLVP  V+ +       V+CG   T++++++G 
Sbjct: 193 -----DGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGG 247

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +YT G   YGQLG       L P +VE  L  +++  I+ G  H   LTS   +Y WG  
Sbjct: 248 LYTYGWSKYGQLGHGDFEDHLTPHKVE-ALRDSYISMISGGWRHTMALTSDGNLYGWGWN 306

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIV---CGTSFTAAIC----LHKWVSGVDQSM 588
             G++G GD  D   P  V+    +Q  S+V   CG   T AI     +  W  G +  +
Sbjct: 307 KFGQVGVGDNIDHCSPVQVK-FPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQL 365

Query: 589 CSGCRIPFNFKR 600
             G  +  N  +
Sbjct: 366 GHGESMDRNLPK 377


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 180/330 (54%), Gaps = 20/330 (6%)

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           T  G V++WG    GRLGHG +     P+L  +L    +  V CG +HT AV+  G+++T
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFT 82

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WGG    +G LGHGNE     PK+++  L G+ V  ++CG  HTA+VTS G L+T+GD  
Sbjct: 83  WGGGM--YGKLGHGNESGHSTPKRVD-SLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKE 139

Query: 369 FGVLGHGD-RISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            GV GHGD      TP+ ++ L G R V+ +ACG +HT  + +            +G+++
Sbjct: 140 NGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACG-FHTGCLTD------------AGEVY 186

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           TWG+G  GRLGHG +     P  V  L+     Q+SCG   +  +T  G +YT G   +G
Sbjct: 187 TWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHG 246

Query: 487 QLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           QLG   K N   PT V+  L   F+ +I CG  H   LTS  EVYTWG G +G+LGHG  
Sbjct: 247 QLGHGDKVNKVKPTLVK-DLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCG 305

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              + P LVE L  ++V  +      TA +
Sbjct: 306 KKVSTPQLVEKLVGQKVVCVASYNEHTACL 335



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 178/335 (53%), Gaps = 24/335 (7%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG G +      G K   +VP+   S     + ++ CG  H A V+
Sbjct: 26  GGVYTWGR-GDDGRLGHGDN------GWK---YVPRLTHSLAGQVITHVTCGSYHTAAVS 75

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +G +F+WG  + G+LGHG +S  S PK +D+L  + V  +ACG  HT  VT  G +YTW
Sbjct: 76  SKGNLFTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTW 135

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G      G+ GHG+        KL   L G  V  +S   +HT  +T AG+++T+G+G F
Sbjct: 136 GDK--ENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKF 193

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LGHG   +  +PR V++L G R V+ +CG +H+A V             + GK++T+G
Sbjct: 194 GRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVT------------ADGKMYTFG 241

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            G+ G+LGHGDK  ++ PT V  L      Q++CG S +VALT++  VYT G+  +G+LG
Sbjct: 242 GGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLG 301

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
                     ++  KL    V  +A  + H A L 
Sbjct: 302 HGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACLV 336


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/360 (34%), Positives = 194/360 (53%), Gaps = 20/360 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D  +P  VE    L V  IACG  H  ++T+  +V+SWG    GRLGH  +     P L+
Sbjct: 26  DQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHLV 85

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            AL   +++ V CG +HT A++ +G ++TWGG    +G LGHGNE+    P ++   + G
Sbjct: 86  SALTGKSIKQVTCGSYHTAAISDTGALWTWGGG--MYGKLGHGNEVGHPAPCRVEAFI-G 142

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVDSLKGLRTVR-A 397
             V  ++CG  HTA + + G+++ +GD   GV G G+       P+++++LKG++  + A
Sbjct: 143 REVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIA 202

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           ACG +HTAA+ +             G L++WG+G  GRLG G+++ ++ P CV  L    
Sbjct: 203 ACG-FHTAAITQ------------DGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVR 249

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACG 516
             QV+CG   +  +T  G V T G   +GQLG   K N  +P  V+  L    + ++ CG
Sbjct: 250 VKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKA-LEGAGIVQVTCG 308

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
             H   L+   +V+T+G G +G+LGHG       P LVE+L + +V  +      T A+C
Sbjct: 309 WSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVESLANMKVAKVASYNEHTVALC 368



 Score =  172 bits (437), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 173/324 (53%), Gaps = 18/324 (5%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           ++SWG    G+ G+G  +D   P  ++ LK++ V  +ACG  HT  +T   D+++WG   
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRG- 66

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
            + G LGH +    ++P  L   L G  +  V+CG +HTA ++  G L+T+G G +G LG
Sbjct: 67  -DDGRLGHADNHWKYVP-HLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLG 124

Query: 374 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
           HG+ +    P  V++  G    + ACG  HTAA++            + G+++ WGD + 
Sbjct: 125 HGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALL------------AGGEVYCWGDREN 172

Query: 434 GRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-P 491
           G  G G+  E + +P  + AL      Q++     T A+T  G +++ G   +G+LG   
Sbjct: 173 GVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGN 232

Query: 492 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
           + N   P  VEG L    V+++ACG +H A +T   +V T+G G +G+LGHGD  +R  P
Sbjct: 233 EKNQVTPCCVEG-LQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVP 291

Query: 552 SLVEALKDKQVKSIVCGTSFTAAI 575
            LV+AL+   +  + CG S T  +
Sbjct: 292 CLVKALEGAGIVQVTCGWSHTVTL 315



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 1/97 (1%)

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
            GGG H    + G K +  VP  V++     +  + CG  H   +++ G+VF++G    G
Sbjct: 272 FGGGEHGQLGH-GDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHG 330

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           +LGHG ++  + PKL+++L N+ V  VA    HT A+
Sbjct: 331 KLGHGANAKSALPKLVESLANMKVAKVASYNEHTVAL 367


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  197 bits (500), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 189/340 (55%), Gaps = 18/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D  +P  + +     + +IACG  H  A    + E++SWG    GRLGHG  SD+  P+ 
Sbjct: 53  DRPLPTQLSALDAQHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP 112

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL+ + ++ +ACG+ H  AVT+ G++ +WG  N N G LG GN     +P+K+    +
Sbjct: 113 IIALQGLRIKQIACGDSHCLAVTMEGEVQSWG-RNQN-GQLGLGNTEDSLVPQKIQ-AFK 169

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ +  V+ G  H+  +T  G+L+ +G G +G LG GDR     P +V S+   + V  A
Sbjct: 170 GVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVA 229

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT +V             SSG ++T+G    G+LGHG+ E  LVP  + AL +   
Sbjct: 230 CGWRHTISV------------SSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLI 277

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            QVS G   ++ALT+TG ++  G   +GQ+G     +   P +V+    +  V+ I+CG 
Sbjct: 278 SQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQ-ISCGW 336

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   +T +  V++WG+G NG+LGHGDT DRN P ++EAL
Sbjct: 337 RHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEAL 376



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 178/378 (47%), Gaps = 47/378 (12%)

Query: 129 PPKVLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRVSLSSAVSS----- 176
           P +VLL S  A  +V  LS         G DG+ GH     GDT    L + +S+     
Sbjct: 13  PSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGH-----GDTDDRPLPTQLSALDAQH 67

Query: 177 -SSQGSGHDD----GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAV 231
             S   G D      +S  +++ WG         G   R G   G   D  +P+ + +  
Sbjct: 68  IDSIACGADHTLAYSESRNELYSWGW--------GDFGRLGH--GNSSDLLIPQPIIALQ 117

Query: 232 VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA 291
            L ++ IACG  H   VT +GEV SWG    G+LG G   D   P+ I A K + +++VA
Sbjct: 118 GLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVA 177

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
            G  H+ A+T +G++Y WG     +G LG G+    W P+K++  ++   +  V+CG  H
Sbjct: 178 AGAEHSVAITENGELYGWGWG--RYGNLGLGDRNDRWNPEKVS-SVDCDKMVMVACGWRH 234

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           T  V+S+G ++T+G   +G LGHG+      P+++ +L      + + G  H+ A+    
Sbjct: 235 TISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALT--- 291

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                    S+G LF WG    G++G GD      P  V    +    Q+SCG   T+A+
Sbjct: 292 ---------STGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAV 342

Query: 472 TTTGHVYTMGSPVYGQLG 489
           T   +V++ G    GQLG
Sbjct: 343 TEKENVFSWGRGTNGQLG 360


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 187/340 (55%), Gaps = 18/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D  +P  + +     + +IACG  H  A    + E++SWG    GRLGHG  SD+  P+ 
Sbjct: 52  DRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP 111

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL+ + ++ +ACG+ H  AVT+ G++ +WG  N N G LG G      +P+K+    +
Sbjct: 112 IIALQGLRIKQIACGDSHCLAVTMEGEVQSWG-RNQN-GQLGLGTSEDSLVPQKIQ-TFQ 168

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ +  V+ G  H+  +T  G+L+ +G G +G LG GDR     P +V S+   + V  A
Sbjct: 169 GVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVA 228

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT +V             S G L+T+G    G+LGHG+ E  LVP  + AL +   
Sbjct: 229 CGWRHTISV------------SSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLI 276

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            QVS G   ++ALT+TG +Y  G   +GQ+G     +   P +V+    +  V+ I+CG 
Sbjct: 277 SQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQ-ISCGW 335

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   +T +  V++WG+G NG+LGHGDT DRN P ++EAL
Sbjct: 336 RHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEAL 375



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 166/339 (48%), Gaps = 16/339 (4%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H   +     V SWG    G+LGHG   D   P  + AL    ++ +ACG  HT
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHT 77

Query: 298 CAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + S  ++Y+WG  +  FG LGHGN   L +P+ +   L+G+ +  ++CG  H   VT
Sbjct: 78  LAYSESRNELYSWGWGD--FGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHCLAVT 134

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG G       P+++ + +G+     A G  H+ A+ E       
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 187

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                +G+L+ WG G  G LG GD+  R +P  V+++       V+CG   T+++++ G 
Sbjct: 188 -----NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGG 242

Query: 477 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           +YT G   YGQLG       L  +    L+   + +++ G  H   LTS   +Y WG   
Sbjct: 243 LYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNK 302

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G++G GD  DR  P  V+   D++V  I CG   T A+
Sbjct: 303 FGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAV 341



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 178/378 (47%), Gaps = 47/378 (12%)

Query: 129 PPKVLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRVSLSSAVSS----- 176
           P +VLL S  A  +V  LS         G DG+ GH     GDT    L + +S+     
Sbjct: 12  PSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGH-----GDTDDRLLPTHLSALDAQQ 66

Query: 177 -SSQGSGHDD----GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAV 231
             S   G D      +S  +++ WG         G   R G   G   D  +P+ + +  
Sbjct: 67  IDSIACGADHTLAYSESRNELYSWGW--------GDFGRLGH--GNSSDLLIPQPIIALQ 116

Query: 232 VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA 291
            L ++ IACG  H   VT +GEV SWG    G+LG G   D   P+ I   + + +++VA
Sbjct: 117 GLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVA 176

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
            G  H+ A+T +G++Y WG     +G LG G+    W+P+K++  ++   +  V+CG  H
Sbjct: 177 AGAEHSVAITENGELYGWGWG--RYGNLGLGDRNDRWIPEKVS-SVDCDKMVMVACGWRH 233

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           T  V+S G L+T+G   +G LGHG+      P+++ +L      + + G  H+ A+    
Sbjct: 234 TISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALT--- 290

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                    S+G L+ WG    G++G GD   R  P  V    +    Q+SCG   T+A+
Sbjct: 291 ---------STGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAV 341

Query: 472 TTTGHVYTMGSPVYGQLG 489
           T   +V++ G    GQLG
Sbjct: 342 TEKENVFSWGRGTNGQLG 359


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/325 (38%), Positives = 175/325 (53%), Gaps = 18/325 (5%)

Query: 235 VQNIACGGRHAALVTKQG-EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           + ++ CG  H    ++ G EV+SWG    GRLGHG  SD+  P  I AL  I ++ +ACG
Sbjct: 69  IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           + H  AVT+ G++ +WG  N N G LG G+     +P+K+    EGI +  V+ G  HTA
Sbjct: 129 DSHCLAVTMEGEVQSWG-RNQN-GQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTA 185

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            VT  G L+ +G G +G LG GDR     P  V S  G +    ACG  HT +V      
Sbjct: 186 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV------ 239

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                   SG L+T+G    G+LGHGD E  L+P  + AL      Q+S G   T+ALT+
Sbjct: 240 ------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTS 293

Query: 474 TGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            G +Y  G   +GQ+G      +  P +V     +  V+ ++CG  H   +T R  V+ W
Sbjct: 294 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAW 352

Query: 533 GKGANGRLGHGDTDDRNFPSLVEAL 557
           G+G NG+LG G++ DRNFP ++EAL
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEAL 377



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 179/369 (48%), Gaps = 22/369 (5%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H+  +     V SWG    G+LGHG   D   P  + AL    +  V CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 298 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + SG ++Y+WG  +  FG LGHGN   L+ P  +   L GI +  ++CG  H   VT
Sbjct: 80  VAYSQSGMEVYSWGWGD--FGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 136

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG GD      P+++ + +G+R    A G  HTAAV E       
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 G L+ WG G  G LG GD+  RLVP  V +        V+CG   T++++ +G 
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +YT G   YGQLG       L P ++E  L+ +F+ +I+ G  H   LTS  ++Y WG  
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 591
             G++G G+  D+  P  V    D++V  + CG   T A+     +  W  G +  +  G
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363

Query: 592 CRIPFNFKR 600
             +  NF +
Sbjct: 364 ESVDRNFPK 372



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 173/381 (45%), Gaps = 49/381 (12%)

Query: 127 AAPPKVLLPSESACGSVNSLSSG-------GSDGRTGH-----------LKGLSGDTFRV 168
           A P KVL+ S  A  SV  LS         G DG+ GH           L  L G    V
Sbjct: 12  APPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQI-V 70

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
           S++     +   S      S  +V+ WG         G   R G   G   D F P  ++
Sbjct: 71  SVTCGADHTVAYS-----QSGMEVYSWGW--------GDFGRLGH--GNSSDLFTPLPIK 115

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           +   + ++ IACG  H   VT +GEV SWG    G+LG G   D   P+ I A + I ++
Sbjct: 116 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK 175

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
           +VA G  HT AVT  GD+Y WG     +G LG G+     +P+++     G  +S V+CG
Sbjct: 176 MVAAGAEHTAAVTEDGDLYGWGWG--RYGNLGLGDRTDRLVPERVT-STGGEKMSMVACG 232

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             HT  V+ +G L+T+G   +G LGHGD      P ++++L      + + G  HT A+ 
Sbjct: 233 WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALT 292

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                       S GKL+ WG    G++G G+   +  P  V    +    QVSCG   T
Sbjct: 293 ------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 340

Query: 469 VALTTTGHVYTMGSPVYGQLG 489
           +A+T   +V+  G    GQLG
Sbjct: 341 LAVTERNNVFAWGRGTNGQLG 361


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 129/365 (35%), Positives = 190/365 (52%), Gaps = 18/365 (4%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D  VP  +       + ++ CG  H  A    + +V+SWG    GRLGHG  SDV  P+ 
Sbjct: 53  DRLVPTVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQP 112

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           + AL+ + ++ +ACG+ H  AVT++G + +WG  N N G LG G      LP+K+    E
Sbjct: 113 VKALQGLKIKQIACGDSHCLAVTMAGQVQSWG-RNQN-GQLGLGTTEDSLLPQKIQA-FE 169

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ V  ++ G  HTA VT  G L+ +G G +G LG GDR     P +V S++G + V  A
Sbjct: 170 GVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVA 229

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT  V +            SG L+T+G    G+LGHGD E  LVP  + AL +   
Sbjct: 230 CGWRHTITVSD------------SGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTI 277

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGD 517
            Q+S G   T+ALT+ G +Y  G   +GQ+G    +    P +V     +  + ++ACG 
Sbjct: 278 SQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQK-ISQVACGW 336

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            H   L+ +  V++WG+G +G+LG+G+  DRN P L++AL           +S  A    
Sbjct: 337 RHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSTDGSGCKKLESSTAAPFAA 396

Query: 578 HKWVS 582
             WVS
Sbjct: 397 KVWVS 401



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 176/362 (48%), Gaps = 25/362 (6%)

Query: 219 MDSF---VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           MDS    VP +    VVL    ++ G  H+  +     + SWG    G+LGHG   D   
Sbjct: 1   MDSVMAAVPDSPPQTVVL----VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV 56

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
           P ++       +  V CG  HT A +     +Y+WG  +  FG LGHGN   ++ P+ + 
Sbjct: 57  PTVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGD--FGRLGHGNSSDVFTPQPVK 114

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
             L+G+ +  ++CG  H   VT AGQ+ ++G    G LG G       P+++ + +G+  
Sbjct: 115 A-LQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCV 173

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
              A G  HTAAV E             G L+ WG G  G LG GD+  RL+P  V+++ 
Sbjct: 174 KMIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVE 221

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEI 513
                 V+CG   T+ ++ +G++YT G   YGQLG       L P ++E  L  + + +I
Sbjct: 222 GEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDSTISQI 280

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           + G  H   LTS  ++Y WG    G++G G+ DD   P  V   +D+++  + CG   T 
Sbjct: 281 SGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTL 340

Query: 574 AI 575
           A+
Sbjct: 341 AL 342


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 187/340 (55%), Gaps = 18/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D  +P  + +     + +IACG  H  A    + E++SWG    GRLGHG  SD+  P+ 
Sbjct: 52  DRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP 111

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL+ + ++ +ACG+ H  AVT+ G++ +WG  N N G LG G      +P+K+    +
Sbjct: 112 IIALQGLRIKQIACGDSHCLAVTMEGEVQSWG-RNQN-GQLGLGTSEDSLVPQKIQ-TFQ 168

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ +  V+ G  H+  +T  G+L+ +G G +G LG GDR     P +V S+   + V  A
Sbjct: 169 GVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVA 228

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT +V             S G L+T+G    G+LGHG+ E  LVP  + AL +   
Sbjct: 229 CGWRHTISV------------SSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLI 276

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            QVS G   ++ALT+TG +Y  G   +GQ+G     +   P +V+    +  V+ I+CG 
Sbjct: 277 SQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQ-ISCGW 335

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   +T +  V++WG+G NG+LGHGDT DRN P ++EAL
Sbjct: 336 RHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEAL 375



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 166/339 (48%), Gaps = 16/339 (4%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H   +     V SWG    G+LGHG   D   P  + AL    ++ +ACG  HT
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHT 77

Query: 298 CAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + S  ++Y+WG  +  FG LGHGN   L +P+ +   L+G+ +  ++CG  H   VT
Sbjct: 78  LAYSESRNELYSWGWGD--FGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHCLAVT 134

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG G       P+++ + +G+     A G  H+ A+ E       
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 187

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                +G+L+ WG G  G LG GD+  R +P  V+++       V+CG   T+++++ G 
Sbjct: 188 -----NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGG 242

Query: 477 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           +YT G   YGQLG       L  +    L+   + +++ G  H   LTS   +Y WG   
Sbjct: 243 LYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNK 302

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G++G GD  DR  P  V+   D++V  I CG   T A+
Sbjct: 303 FGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAV 341



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 178/378 (47%), Gaps = 47/378 (12%)

Query: 129 PPKVLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRVSLSSAVSS----- 176
           P +VLL S  A  +V  LS         G DG+ GH     GDT    L + +S+     
Sbjct: 12  PSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGH-----GDTDDRLLPTHLSALDAQQ 66

Query: 177 -SSQGSGHDD----GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAV 231
             S   G D      +S  +++ WG         G   R G   G   D  +P+ + +  
Sbjct: 67  IDSIACGADHTLAYSESRNELYSWGW--------GDFGRLGH--GNSSDLLIPQPIIALQ 116

Query: 232 VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA 291
            L ++ IACG  H   VT +GEV SWG    G+LG G   D   P+ I   + + +++VA
Sbjct: 117 GLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVA 176

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
            G  H+ A+T +G++Y WG     +G LG G+    W+P+K++  ++   +  V+CG  H
Sbjct: 177 AGAEHSVAITENGELYGWGWG--RYGNLGLGDRNDRWIPEKVS-SVDCDKMVMVACGWRH 233

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           T  V+S G L+T+G   +G LGHG+      P+++ +L      + + G  H+ A+    
Sbjct: 234 TISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALT--- 290

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                    S+G L+ WG    G++G GD   R  P  V    +    Q+SCG   T+A+
Sbjct: 291 ---------STGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAV 341

Query: 472 TTTGHVYTMGSPVYGQLG 489
           T   +V++ G    GQLG
Sbjct: 342 TEKENVFSWGRGTNGQLG 359


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/331 (38%), Positives = 182/331 (54%), Gaps = 22/331 (6%)

Query: 233 LDVQNIA----CGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV 287
            DV  IA    CG  H  A   +Q +++SWG    GRLGHG  SDV HP+ I+AL+ I +
Sbjct: 69  FDVPGIASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKI 128

Query: 288 ELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 347
           + +ACG+ H  AVT +G +++WG  N N G LG GN     LP+K++   EG+ V  ++ 
Sbjct: 129 KQIACGDSHCLAVTDAGQVHSWG-RNQN-GQLGLGNTEDSLLPQKIHA-FEGVCVKMIAA 185

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  HTA +   G L+ +G G +G LG GDR     P +V S++G + V  ACG  HT  V
Sbjct: 186 GAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTV 245

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
                        SSG L+T+G    G+LGHGD E  LVP  + AL +    Q++ G   
Sbjct: 246 ------------SSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRH 293

Query: 468 TVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           T+A+   G +Y  G   +GQ+G     +   P +V     +  V ++ACG  H   LT  
Sbjct: 294 TMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFP-DEQKVAQVACGWRHTLALTEN 352

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
             V++WG+G +G+LGHG+  DRN P +++AL
Sbjct: 353 KNVFSWGRGTSGQLGHGEIIDRNTPKMIDAL 383



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 175/363 (48%), Gaps = 23/363 (6%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D  VP+A E  V L    ++ G  H+  +     V SWG    G+LGHG   D   P L+
Sbjct: 11  DEEVPEAPEQTVAL----VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLL 66

Query: 280 DALKNINV-ELVACGEHHTCAVT-LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL 337
                  +  +V CG  HT A +     +Y+WG  +  FG LGHGN   ++ P+ +   L
Sbjct: 67  SGFDVPGIASVVICGADHTTAYSDEQMQLYSWGWGD--FGRLGHGNSSDVFHPQPIEA-L 123

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           +GI +  ++CG  H   VT AGQ+ ++G    G LG G+      P+++ + +G+     
Sbjct: 124 QGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMI 183

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           A G  HTAA++E             G L+ WG G  G LG GD+  RLVP  V+++    
Sbjct: 184 AAGAEHTAAILE------------DGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEK 231

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACG 516
              V+CG   TV ++++G +YT G   YGQLG       L P ++E  L   F+ +IA G
Sbjct: 232 MVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDRFISQIAGG 290

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
             H   +    ++Y WG    G++G  D  D   P  V    +++V  + CG   T A+ 
Sbjct: 291 WRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALT 350

Query: 577 LHK 579
            +K
Sbjct: 351 ENK 353



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 137/270 (50%), Gaps = 15/270 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D F P+ +E+   + ++ IACG  H   VT  G+V SWG    G+LG G   D   P+ I
Sbjct: 113 DVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKI 172

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            A + + V+++A G  HT A+   GD+Y WG     +G LG G+     +P+K++  +EG
Sbjct: 173 HAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWG--QYGNLGLGDRNDRLVPEKVS-SVEG 229

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
             +  V+CG  HT  V+S+G L+T+G   +G LGHGD      P ++++LK     + A 
Sbjct: 230 EKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAG 289

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           G  HT AV               GKL+ WG    G++G  D      P  V    E    
Sbjct: 290 GWRHTMAVA------------GDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVA 337

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           QV+CG   T+ALT   +V++ G    GQLG
Sbjct: 338 QVACGWRHTLALTENKNVFSWGRGTSGQLG 367


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 142/415 (34%), Positives = 210/415 (50%), Gaps = 36/415 (8%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            V++WG    D +        G   G K+   +P   E    L   +IA G +   +V+++
Sbjct: 2963 VYVWGLNDKDQL--------GGLKGSKIK--LPVYSEVLSKLKPIHIAGGSKTLFIVSQE 3012

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ GE   GRLG G D++V  PK I  L    ++ VA   G  H  A+T  G +++W
Sbjct: 3013 GKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 3072

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN MSL  PK +   L+   +  ++CG  H+A + S G+L+T+G G 
Sbjct: 3073 GEGED---GKLGHGNNMSLDKPKLIE-TLKSKRIRDIACGSGHSAAIASNGELYTWGLGE 3128

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD ++ + P+ V +L G R V+ ACG             + + +  + G +++W
Sbjct: 3129 YGRLGHGDTVTQARPKLVQTLVGHRVVQVACG----------SRDAQTMALTTDGCVYSW 3178

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +    P  V  L      QV CG   ++ALT  G V+T G   Y +L
Sbjct: 3179 GDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRL 3238

Query: 489  GDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G    +  + PT VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3239 GHGNDHHVRKPTLVEGLRGKKIV-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSV 3297

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKR 602
               PSLV  L+D +V  + CG+S + A     WV  VDQ   SG + P  F   R
Sbjct: 3298 NRKPSLVHELEDARVNRVSCGSSHSIA-----WVL-VDQP-SSGNQEPVTFPTAR 3345



 Score =  186 bits (473), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/378 (32%), Positives = 190/378 (50%), Gaps = 20/378 (5%)

Query: 202  GILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 260
             I G G +  G   G++     +P   ES   L    +A G +    VT  G+V+S G  
Sbjct: 3944 AIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYG 4003

Query: 261  LGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGL 318
              GRLG G    V  P L+++++++ ++ VA   G  H  A++  G +Y+WG  +   G 
Sbjct: 4004 AAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGD--DGK 4061

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
            LGHGN+MS   PK +   L G+ +  ++CG  H+A +TSAG L+T+G G +G LGHGD  
Sbjct: 4062 LGHGNKMSYDRPKLIEDLL-GVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4120

Query: 379  SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS--GKLFTWGDGDRGRL 436
                P+ V++L+  + +  ACG               + + C +    +++WGDGD G+L
Sbjct: 4121 DQLRPKVVEALQDYKVIDVACG------------SGDAQTLCVTDDDNVWSWGDGDYGKL 4168

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK 496
            G G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  
Sbjct: 4169 GRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV 4228

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
               R    L    +  IA G  H    + + EV+TWG    G+LG G T   + P LV A
Sbjct: 4229 RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA 4288

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 4289 LQGKKITRVACGSAHTLA 4306



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 176/335 (52%), Gaps = 37/335 (11%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG   G + G+G     S P   DA+  + ++ + C E     ++L+G++Y     
Sbjct: 441 EVLAWG---GVKFGNG-----STPFYCDAIAELGIKQLCCTERALMILSLNGNVYN---- 488

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGI--HVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                 + HG+E     P++++G  + +   ++S S G  H A+ T  G ++++G+G  G
Sbjct: 489 ------MYHGSETQY--PQRVHGFSDKLVTMIASHSDGKHHLAL-TQDGCVYSWGNGDGG 539

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LGHGD +S   P+ +++L     V  ACG  ++AA+              SG+L+TWG 
Sbjct: 540 RLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAAL------------SVSGELYTWGR 587

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQL 488
           G+ GRLGHG+ +  ++PT V  L       V+CG   S T+ +T +G V++ G   YG+L
Sbjct: 588 GNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKL 647

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
           G    +G    ++  KL    V ++ CG    A LT+  EVYTWGKG   RLGHG  +  
Sbjct: 648 GRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHV 707

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
            +P ++E+L+DK++K +  G +    +   ++V G
Sbjct: 708 RYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYG 742



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 18/252 (7%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G+H   +T+ G V+SWG   GGRLGHG       PKLI+AL   N+  +ACG  ++ A++
Sbjct: 518 GKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAALS 577

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAG 359
           +SG++YTWG    N+G LGHGN   + +P  L   L+G  V  V+CG     T  VT++G
Sbjct: 578 VSGELYTWGRG--NYGRLGHGNFDDVMIP-TLVTTLKGHTVVHVACGSGDSQTLCVTASG 634

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            +F++GDG +G LG G      TP+ VD L  +  V+  CG   +AA+            
Sbjct: 635 IVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALT----------- 683

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
            + G+++TWG GD  RLGHG +E    P  + +L +     +S G +  + LT    VY 
Sbjct: 684 -AHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYG 742

Query: 480 MGSPVYGQLGDP 491
            G   YGQ+ DP
Sbjct: 743 WGRNDYGQI-DP 753



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 29/289 (10%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G V+ WGE   DG LG          G KM    PK +E  + +++ +IACGG H+A 
Sbjct: 4047 SEGHVYSWGE-GDDGKLG---------HGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAA 4096

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGD 305
            +T  G +++WG+   GRLGHG   D   PK+++AL++  V  VAC  G+  T  VT   +
Sbjct: 4097 ITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN 4156

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +++WG  + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G
Sbjct: 4157 VWSWG--DGDYGKLGRGGSDGCKVPLKIDS-LAGLGVIKVECGSQFSVALTRSGAVYTWG 4213

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GK 424
             G +  LGHG    V  PR+V +L+G + +  A G  H  A             CS  G+
Sbjct: 4214 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA-------------CSDKGE 4260

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            +FTWGD D G+LG G   A   P  V AL      +V+CG + T+A +T
Sbjct: 4261 VFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWST 4309



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 173/336 (51%), Gaps = 31/336 (9%)

Query: 250  KQGEVFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            ++  V+ WG    ++LGG  G  +   V + +++  LK I++   A G      V+  G 
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKGSKIKLPV-YSEVLSKLKPIHI---AGGSKTLFIVSQEGK 3014

Query: 306  MYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEG---IHVSSVSCGPWHTAVVTSAGQL 361
            +Y  G G+N   G LG G++ ++  PK +  P      I   +V  G  H   +T  G++
Sbjct: 3015 LYACGEGTN---GRLGLGDDNNVCEPKPI--PFLSQFVIKKVAVHSGGKHALALTQDGKV 3069

Query: 362  FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            F++G+G  G LGHG+ +S+  P+ +++LK  R    ACG  H+AA+             S
Sbjct: 3070 FSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIA------------S 3117

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYT 479
            +G+L+TWG G+ GRLGHGD   +  P  V  LV     QV+CG   + T+ALTT G VY+
Sbjct: 3118 NGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYS 3177

Query: 480  MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             G   +G+LG   ++G     V  +L    V ++ CG      LT   EV+TWGKG   R
Sbjct: 3178 WGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFR 3237

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            LGHG+      P+LVE L+ K++  +  G     A+
Sbjct: 3238 LGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 186/378 (49%), Gaps = 34/378 (8%)

Query: 213 SYAGVKM-DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS 271
           ++ GVK  +   P   ++   L ++ + C  R   +++  G V++        + HG  S
Sbjct: 444 AWGGVKFGNGSTPFYCDAIAELGIKQLCCTERALMILSLNGNVYN--------MYHG--S 493

Query: 272 DVSHPKLIDALKNINVELVAC---GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLW 328
           +  +P+ +    +  V ++A    G+HH  A+T  G +Y+WG  N + G LGHG+ +S  
Sbjct: 494 ETQYPQRVHGFSDKLVTMIASHSDGKHH-LALTQDGCVYSWG--NGDGGRLGHGDTVSYD 550

Query: 329 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS 388
            PK +   LE  ++  ++CG  ++A ++ +G+L+T+G G +G LGHG+   V  P  V +
Sbjct: 551 EPKLIEALLEK-NIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTT 609

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLV 446
           LKG   V  ACG               S + C  +SG +F+WGDGD G+LG G  +    
Sbjct: 610 LKGHTVVHVACG------------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKT 657

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKL 505
           P  V  L++ N  +V CG   + ALT  G VYT G     +LG   + + + P  +E  L
Sbjct: 658 PKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIE-SL 716

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
               +++++ G  H+ VLT    VY WG+   G++        + P+L   L  K V  +
Sbjct: 717 RDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQIDPTLGSVISEPTLCPTLSSKTVIGL 776

Query: 566 VCGTSFTAAICLHKWVSG 583
             G + + A C+  W  G
Sbjct: 777 ASGPTQSFAWCMSAWSGG 794



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 143/283 (50%), Gaps = 27/283 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG G + S       +D   PK +E+     +++IACG  H+A + 
Sbjct: 3067 GKVFSWGEGE-DGKLGHGNNMS-------LDK--PKLIETLKSKRIRDIACGSGHSAAIA 3116

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+++WG    GRLGHG     + PKL+  L    V  VACG  +  T A+T  G +Y
Sbjct: 3117 SNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVY 3176

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G     + P  +   L G+ V  V CG   +  +T  G+++T+G G
Sbjct: 3177 SWG--DGDFGKLGRGGSDGCYTPLVVE-RLNGLGVVQVECGAQFSLALTKYGEVWTWGKG 3233

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG+   V  P  V+ L+G + V  A G  H  AV +            +G+++ 
Sbjct: 3234 DYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTD------------TGQVYA 3281

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
            WGD D G+ G+G       P+ V  L +    +VSCG S ++A
Sbjct: 3282 WGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSIA 3324



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 145/313 (46%), Gaps = 42/313 (13%)

Query: 300  VTLSGDM-YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            + + GD  YT    N N    GH  ++  WL ++                 W T     +
Sbjct: 3898 MAMDGDTEYTKDHENHNIFKQGHDEQLLQWLNRRPED--------------W-TLSWDGS 3942

Query: 359  GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            G ++ +G    G LG  +   V  P   +SL  LR ++ A G     AV           
Sbjct: 3943 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT---------- 3992

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTGH 476
              + GK+++ G G  GRLG G  ++ ++PT + ++  V      VS G    +AL++ GH
Sbjct: 3993 --ADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGH 4050

Query: 477  VYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VY+ G    G+LG   K +   P  +E  L    ++ IACG +H A +TS   +YTWGKG
Sbjct: 4051 VYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIID-IACGGHHSAAITSAGWLYTWGKG 4109

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG------VD 585
              GRLGHGD+DD+  P +VEAL+D +V  + CG+     +C+    + W  G      + 
Sbjct: 4110 RYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 4169

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4170 RGGSDGCKVPLKI 4182



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 155/337 (45%), Gaps = 34/337 (10%)

Query: 303  SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            SG +Y WG ++   G LG   G ++ L  P +    L  I ++    G      VT+ G+
Sbjct: 3942 SGAIYGWGHNH--RGQLGGLEGPKVKLPAPCESLSALRPIQLAG---GEQTLFAVTADGK 3996

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGSSSSS 418
            +++ G G  G LG G   SV  P  ++S++   ++ V  + G  H  A+           
Sbjct: 3997 VYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLAL----------- 4045

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
              S G +++WG+GD G+LGHG+K +   P  +  L+      ++CG   + A+T+ G +Y
Sbjct: 4046 -SSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLY 4104

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 536
            T G   YG+LG   ++ +L  +V   L    V ++ACG  D     +T    V++WG G 
Sbjct: 4105 TWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4164

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSGVDQSMCSGC 592
             G+LG G +D    P  +++L    V  + CG+ F+ A+     ++ W  G    +  G 
Sbjct: 4165 YGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4224

Query: 593  -------RIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 622
                   R     + K+      G ++C  CS K  V
Sbjct: 4225 DDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 4261



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 36/251 (14%)

Query: 150  GSDGRTGHLKGLSGDTFRVSLSSAVSSS---SQGSGHDDGDSL-----GDVFIWGECTGD 201
            G  GR GH  G S D  R  +  A+          G  D  +L      +V+ WG+  GD
Sbjct: 4109 GRYGRLGH--GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGD--GD 4164

Query: 202  GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
                G + R GS  G K    VP  ++S   L V  + CG + +  +T+ G V++WG+  
Sbjct: 4165 Y---GKLGRGGS-DGCK----VPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGD 4216

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
              RLGHG D  V  P+ + AL+   +  +A G  H  A +  G+++TWG ++   G LG 
Sbjct: 4217 YHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND--EGQLGD 4274

Query: 322  GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
            G   +L  P+ ++  L+G  ++ V+CG  HT   ++A                  R+  S
Sbjct: 4275 GTTSALHRPRLVHA-LQGKKITRVACGSAHTLAWSTAK-------------ATQSRMPAS 4320

Query: 382  TPREVDSLKGL 392
            TP E D +K L
Sbjct: 4321 TPMEYDLVKDL 4331


>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
 gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
           adhaerens]
          Length = 330

 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/330 (35%), Positives = 174/330 (52%), Gaps = 22/330 (6%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL-SGDMYTWGGS 312
           V++WG  + G LGHG D D+  P++++AL   N++ +ACG H   A+    G +Y+WG  
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA---GQLFTFGDGTF 369
              +G+LG GN  S + P K+    +  +V  +SC   H A VTS    G +++FGD + 
Sbjct: 61  K--YGILGQGNLRSRFAPLKI-ASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSN 117

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
             LG GD    + P+ V  L     ++ ACG +H+AA+             + G LF WG
Sbjct: 118 SQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAAL------------SAKGNLFLWG 165

Query: 430 DGDRGRLGHGDKEARLVPTCV-AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GD G+LG G+      PT +     +     V+CG   T  LT  G VY  GS +YGQ+
Sbjct: 166 LGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQI 225

Query: 489 GDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
             P  N   LP R+    +K FV  ++CG +H A +T   ++Y WG   +GRLG GD   
Sbjct: 226 AAPSMNKFHLPYRISFNTSKRFVS-VSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQ 284

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           R+ P+ VE  +DK++  I CG+  TAA+ +
Sbjct: 285 RSSPTEVEGFRDKKIGRIACGSKHTAALII 314



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 29/286 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG     GILG G  RS  +A +K+ SF     +S+ V+D   I+C   HAA VT
Sbjct: 52  GKVYSWG-LGKYGILGQGNLRS-RFAPLKIASF-----KSSNVID---ISCHELHAAAVT 101

Query: 250 ---KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
                G V+S+G+    +LG G     + P+L+  L + N+  VACG++H+ A++  G++
Sbjct: 102 SVTNTGSVYSFGDNSNSQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNL 161

Query: 307 YTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           + WG G +   G LG GN      P  L+   +   V  V+CG  HT ++T  G ++ FG
Sbjct: 162 FLWGLGDD---GQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFG 218

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
              +G +          P  +      R V  +CG +H+AA+ E            +GKL
Sbjct: 219 SNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITE------------NGKL 266

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
           + WG    GRLG GD + R  PT V    +    +++CG   T AL
Sbjct: 267 YAWGLETDGRLGLGDCKQRSSPTEVEGFRDKKIGRIACGSKHTAAL 312



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 155/341 (45%), Gaps = 38/341 (11%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA-ALVTK 250
           V+ WG     GI G   H      G  +D   P+ VE+ +  +++ +ACG     AL  +
Sbjct: 1   VYTWGS----GINGALGH------GEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAE 50

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL---SGDMY 307
            G+V+SWG    G LG G       P  I + K+ NV  ++C E H  AVT    +G +Y
Sbjct: 51  DGKVYSWGLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVY 110

Query: 308 TWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           ++G  SN   G+     +   +   +L   L   ++  V+CG +H+A +++ G LF +G 
Sbjct: 111 SFGDNSNSQLGV----GDTEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGL 166

Query: 367 GTFGVLGHGDRISVSTPREVDSL--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G  G LG G+  ++ST   +  +  K  + +  ACG  HT  +    VG         G 
Sbjct: 167 GDDGQLGLGNY-NLSTEPTILHIGEKKAKVMDVACGDLHTCILT---VG---------GL 213

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           ++ +G    G++         +P  ++      F  VSCG   + A+T  G +Y  G   
Sbjct: 214 VYAFGSNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLET 273

Query: 485 YGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
            G+  LGD K     PT VEG   K  +  IACG  H A L
Sbjct: 274 DGRLGLGDCKQRSS-PTEVEGFRDKK-IGRIACGSKHTAAL 312



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 212 GSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
           G  A   M+ F +P  +         +++CG  H+A +T+ G++++WG E  GRLG G  
Sbjct: 223 GQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDC 282

Query: 271 SDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
              S P  ++  ++  +  +ACG  HT A+ +
Sbjct: 283 KQRSSPTEVEGFRDKKIGRIACGSKHTAALII 314


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 136/411 (33%), Positives = 203/411 (49%), Gaps = 35/411 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DVF+WG             R G  A    +  +P    S      Q + CG     ++  
Sbjct: 3979 DVFLWGA-----------GRHGQLAEAGRNVMIPSGAGS--FSQAQQVICGQNCTFVIQA 4025

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4026 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4085

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVT+ G+LFTFG+G
Sbjct: 4086 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4142

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+GL   + ACG+ HT AV           +     ++ 
Sbjct: 4143 DYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAV-----------SADGSLVWA 4191

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4192 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4251

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            L + +A      ++   L   F+++IA G  H   L++  EVY WG  + G+LG G T+ 
Sbjct: 4252 LPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNH 4311

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNF 598
               P+LV AL+ K ++ I  G   +AA     W +        G  +P   
Sbjct: 4312 VREPTLVTALQGKNIRQISAGRCHSAA-----WTAAPVPPRAPGVAVPLQL 4357



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 169/345 (48%), Gaps = 20/345 (5%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           D Q I  G     +++  G V + G+   GRLG G  ++ S  K +    + +++ V+  
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463

Query: 294 ---EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
              + HT A T  G++++WG  + ++G LGHGN  +   PK + G L+G  V  VS G  
Sbjct: 464 KGSDGHTLAFTTEGEVFSWG--DGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYR 521

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           H+A VT  G+L+T+G+G FG LGHGD  S + P  V  +  +  V  +CG  HT A+ + 
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK- 578

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                         ++++G GD G+LGHGD      P  V AL      +V  G   ++A
Sbjct: 579 ----------DGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLA 628

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
           LT+TG VY  G       G  +A    P  +E +L    + +I+ GD H   L+   EVY
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVY 687

Query: 531 TWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            WG  + G+ G G+ T     P  V  L    ++ I  GTS + A
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 161/335 (48%), Gaps = 27/335 (8%)

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
           +V++  EV+ WG     +L  G    +  PKL       + + +  G++ T  ++  G +
Sbjct: 367 VVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPCFS--DAQTIEAGQYCTFVISTDGSV 424

Query: 307 YTWG-GSNCNFGLLGHGNEMSLWLPKKLN-GPLEGI-HVSSVSCGPWHTAVVTSAGQLFT 363
              G GS    GL    N+ +L   KKL   P   I  VSS      HT   T+ G++F+
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTL---KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481

Query: 364 FGDGTFGVLGHGDRISVSTPREVD-SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           +GDG +G LGHG+  +   P+ +  +L+G   V  + G  H+AAV E             
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTE------------D 529

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMG 481
           G+L+TWG+GD GRLGHGD  +R +PT V  +   N  +VSCG S T+AL+  G  V++ G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFG 587

Query: 482 SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
               G+LG    N     +V   L   F  ++  G      LTS  +VY WG GA   LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGAC--LG 645

Query: 542 HGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAI 575
            G ++     P L+E L   ++  I  G S   A+
Sbjct: 646 CGSSEATALRPKLIEELAATRIVDISIGDSHCLAL 680



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 164/344 (47%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 4031 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4081

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 4082 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 4130

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+ +++  VACG +HT AV+  G +  
Sbjct: 4131 TADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSL-V 4189

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 4190 WAFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4248

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+ V  L G+     A G  HT A+             +SG+++ W
Sbjct: 4249 LIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLAL------------SASGEVYAW 4296

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V AL   N  Q+S G   + A T
Sbjct: 4297 GSNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCHSAAWT 4340



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 154/307 (50%), Gaps = 40/307 (13%)

Query: 299 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            V+ + ++Y WG SN +  L+  G +  +  PK    P       ++  G + T V+++ 
Sbjct: 367 VVSETCEVYVWG-SNSSHQLV-EGTQEKILQPKL--APCFS-DAQTIEAGQYCTFVISTD 421

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVG 413
           G +   G G++G LG GD  + ST +++      S+K + + + + G  HT A       
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT----- 474

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALT 472
                  + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T
Sbjct: 475 -------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVT 527

Query: 473 TTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEV 529
             G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-V 583

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVD 585
           +++G G NG+LGHGDT+    P +VEAL+    + +  G+  + A+     ++ W  G  
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 586 QSMCSGC 592
              C GC
Sbjct: 643 ---CLGC 646



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK VE+   +  + +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           + +  +S G  H+   T+
Sbjct: 718 VAIQQISAGTSHSLAWTA 735



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 45/190 (23%)

Query: 137 ESACGSVNSLS-----------SGGSDGRTGHLKGLSGDTFRV-----------SLSSAV 174
           E +CGS ++++            GG +G+ GH     GDT RV             +  V
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFTRKV 619

Query: 175 SSSSQGSGHDDGDSLGDVFIWG--ECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
            + SQ S      S G V+ WG   C G G               +  +  PK +E    
Sbjct: 620 CAGSQSSLA--LTSTGQVYAWGCGACLGCG-------------SSEATALRPKLIEELAA 664

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVA 291
             + +I+ G  H   ++   EV++WG    G+ G G  +  ++ PK +  L  + ++ ++
Sbjct: 665 TRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQIS 724

Query: 292 CGEHHTCAVT 301
            G  H+ A T
Sbjct: 725 AGTSHSLAWT 734


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/325 (38%), Positives = 175/325 (53%), Gaps = 18/325 (5%)

Query: 235 VQNIACGGRHAALVTKQG-EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           + ++ CG  H    ++ G EV+SWG    GRLGHG  SD+  P  I AL  I ++ +ACG
Sbjct: 69  IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           + H  AVT+ G++ +WG  N N G LG G+     +P+K+    EGI +  V+ G  HTA
Sbjct: 129 DSHCLAVTMEGEVQSWG-RNQN-GQLGLGDTEDSLVPQKIQ-AFEGIPIKMVAAGAEHTA 185

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            VT  G L+ +G G +G LG GDR     P  V S  G +    ACG  HT +V      
Sbjct: 186 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV------ 239

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                   SG L+T+G    G+LGHGD E  L+P  + AL      Q+S G   T+ALT+
Sbjct: 240 ------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTS 293

Query: 474 TGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            G +Y  G   +GQ+G      +  P +V     +  V+ ++CG  H   +T R  V+ W
Sbjct: 294 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAW 352

Query: 533 GKGANGRLGHGDTDDRNFPSLVEAL 557
           G+G NG+LG G++ DRNFP ++EAL
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEAL 377



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 178/369 (48%), Gaps = 22/369 (5%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H+  +     V SWG    G+LGHG   D   P  + AL    +  V CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 298 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + SG ++Y+WG  +  FG LGHGN   L+ P  +   L GI +  ++CG  H   VT
Sbjct: 80  VAYSQSGMEVYSWGWGD--FGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 136

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG GD      P+++ + +G+     A G  HTAAV E       
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTE------- 189

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 G L+ WG G  G LG GD+  RLVP  V +        V+CG   T++++ +G 
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +YT G   YGQLG       L P ++E  L+ +F+ +I+ G  H   LTS  ++Y WG  
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 591
             G++G G+  D+  P  V    D++V  + CG   T A+     +  W  G +  +  G
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363

Query: 592 CRIPFNFKR 600
             +  NF +
Sbjct: 364 ESVDRNFPK 372



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 173/381 (45%), Gaps = 49/381 (12%)

Query: 127 AAPPKVLLPSESACGSVNSLSSG-------GSDGRTGH-----------LKGLSGDTFRV 168
           A P KVL+ S  A  SV  LS         G DG+ GH           L  L G    V
Sbjct: 12  APPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQI-V 70

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
           S++     +   S      S  +V+ WG         G   R G   G   D F P  ++
Sbjct: 71  SVTCGADHTVAYS-----QSGMEVYSWGW--------GDFGRLGH--GNSSDLFTPLPIK 115

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           +   + ++ IACG  H   VT +GEV SWG    G+LG G   D   P+ I A + I ++
Sbjct: 116 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIK 175

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
           +VA G  HT AVT  GD+Y WG     +G LG G+     +P+++     G  +S V+CG
Sbjct: 176 MVAAGAEHTAAVTEDGDLYGWGWG--RYGNLGLGDRTDRLVPERVT-STGGEKMSMVACG 232

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             HT  V+ +G L+T+G   +G LGHGD      P ++++L      + + G  HT A+ 
Sbjct: 233 WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALT 292

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                       S GKL+ WG    G++G G+   +  P  V    +    QVSCG   T
Sbjct: 293 ------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 340

Query: 469 VALTTTGHVYTMGSPVYGQLG 489
           +A+T   +V+  G    GQLG
Sbjct: 341 LAVTERNNVFAWGRGTNGQLG 361


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/325 (38%), Positives = 175/325 (53%), Gaps = 18/325 (5%)

Query: 235 VQNIACGGRHAALVTKQG-EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           + ++ CG  H    ++ G EV+SWG    GRLGHG  SD+  P  I AL  I ++ +ACG
Sbjct: 70  IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 129

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           + H  AVT+ G++ +WG  N N G LG G+     +P+K+    EGI +  V+ G  HTA
Sbjct: 130 DSHCLAVTMEGEVQSWG-RNQN-GQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTA 186

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            VT  G L+ +G G +G LG GDR     P  V S  G +    ACG  HT +V      
Sbjct: 187 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV------ 240

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                   SG L+T+G    G+LGHGD E  L+P  + AL      Q+S G   T+ALT+
Sbjct: 241 ------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTS 294

Query: 474 TGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            G +Y  G   +GQ+G      +  P +V     +  V+ ++CG  H   +T R  V+ W
Sbjct: 295 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAW 353

Query: 533 GKGANGRLGHGDTDDRNFPSLVEAL 557
           G+G NG+LG G++ DRNFP ++EAL
Sbjct: 354 GRGTNGQLGIGESVDRNFPKIIEAL 378



 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 179/369 (48%), Gaps = 22/369 (5%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H+  +     V SWG    G+LGHG   D   P  + AL    +  V CG  HT
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 80

Query: 298 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + SG ++Y+WG  +  FG LGHGN   L+ P  +   L GI +  ++CG  H   VT
Sbjct: 81  VAYSQSGMEVYSWGWGD--FGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 137

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG GD      P+++ + +G+R    A G  HTAAV E       
Sbjct: 138 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 190

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 G L+ WG G  G LG GD+  RLVP  V +        V+CG   T++++ +G 
Sbjct: 191 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 245

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +YT G   YGQLG       L P ++E  L+ +F+ +I+ G  H   LTS  ++Y WG  
Sbjct: 246 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGWN 304

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 591
             G++G G+  D+  P  V    D++V  + CG   T A+     +  W  G +  +  G
Sbjct: 305 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 364

Query: 592 CRIPFNFKR 600
             +  NF +
Sbjct: 365 ESVDRNFPK 373



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 173/381 (45%), Gaps = 49/381 (12%)

Query: 127 AAPPKVLLPSESACGSVNSLSSG-------GSDGRTGH-----------LKGLSGDTFRV 168
           A P KVL+ S  A  SV  LS         G DG+ GH           L  L G    V
Sbjct: 13  APPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQI-V 71

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
           S++     +   S      S  +V+ WG         G   R G   G   D F P  ++
Sbjct: 72  SVTCGADHTVAYS-----QSGMEVYSWGW--------GDFGRLGH--GNSSDLFTPLPIK 116

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           +   + ++ IACG  H   VT +GEV SWG    G+LG G   D   P+ I A + I ++
Sbjct: 117 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK 176

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
           +VA G  HT AVT  GD+Y WG     +G LG G+     +P+++     G  +S V+CG
Sbjct: 177 MVAAGAEHTAAVTEDGDLYGWGWG--RYGNLGLGDRTDRLVPERVT-STGGEKMSMVACG 233

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             HT  V+ +G L+T+G   +G LGHGD      P ++++L      + + G  HT A+ 
Sbjct: 234 WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALT 293

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                       S GKL+ WG    G++G G+   +  P  V    +    QVSCG   T
Sbjct: 294 ------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 341

Query: 469 VALTTTGHVYTMGSPVYGQLG 489
           +A+T   +V+  G    GQLG
Sbjct: 342 LAVTERNNVFAWGRGTNGQLG 362


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/390 (33%), Positives = 200/390 (51%), Gaps = 29/390 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            V++WG    D +        G   G K+   +P   E    L   +IA G +   +V+++
Sbjct: 3256 VYVWGLNDKDQL--------GGLKGSKIK--LPVYSEVLSKLKPIHIAGGSKTLFVVSQE 3305

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ GE   GRLG G DS+V  PKLI  L    ++ VA   G  H  A+T  G +++W
Sbjct: 3306 GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSW 3365

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN +SL  P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3366 GEGED---GKLGHGNSVSLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGE 3421

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V SL G R ++ ACG             + + +  + G +++W
Sbjct: 3422 YGRLGHGDTATQMKPKLVQSLVGQRVIQVACG----------SRDAQTMALTADGSVYSW 3471

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +    P  +  L      Q+ CG   ++ALT  G V+T G   Y +L
Sbjct: 3472 GDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRL 3531

Query: 489  GDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G    +  + PT VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3532 GHGNDHHVRKPTLVEGLRGKKVV-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIV 3590

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
               PSLV  L D +V  + CG+S + A  L
Sbjct: 3591 NKKPSLVHELDDARVNRVSCGSSHSIAWVL 3620



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 191/392 (48%), Gaps = 29/392 (7%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            D  G ++ WG     G LGG         G K+   +P   ES   L    +  G +   
Sbjct: 4256 DGSGAIYGWGH-NHRGQLGG-------LEGAKVK--LPVLCESLSALRPVQLTGGEQTLL 4305

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSG 304
             VT  G+V++ G    GRLG G    V  P L+++++++ V+ VA   G  H  A++  G
Sbjct: 4306 AVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4365

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
             +Y+WG  +   G LGHGN +    PK +   L G  +  ++CG  H+A +TSAG L+T+
Sbjct: 4366 HVYSWGEGD--DGKLGHGNRLMYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYTW 4422

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG- 423
            G G +G LGHGD     TP+ V++L+  + +  ACG               + + C +  
Sbjct: 4423 GKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG------------SGDAQTLCVTDD 4470

Query: 424  -KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
              +++WGDGD G+LG G  +   +P  + +L      +V CG   +VALT +G +YT G 
Sbjct: 4471 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGK 4530

Query: 483  PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
              Y +LG    +     R    L    +  IA G  H    T + EV+TWG    G+LG 
Sbjct: 4531 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGD 4590

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G T     P LV AL+ K++  + CG++ T A
Sbjct: 4591 GTTSALQRPRLVHALQGKKITRVACGSAHTLA 4622



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/288 (34%), Positives = 150/288 (52%), Gaps = 27/288 (9%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G V+ WGE   DG LG          G ++    PK +E  +  ++ +IACGG H+A 
Sbjct: 4363 SEGHVYSWGE-GDDGKLG---------HGNRLMYDRPKLIEELLGTEIVDIACGGHHSAA 4412

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGD 305
            +T  G +++WG+   GRLGHG   D   PKL++AL++  V  VAC  G+  T  VT   +
Sbjct: 4413 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN 4472

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +++WG  + ++G LG G      +P K+   L G+ V  V CG   +  +T +G ++T+G
Sbjct: 4473 VWSWG--DGDYGKLGRGGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWG 4529

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
             G +  LGHG    V  PR+V +L+G + +  A G  H  A  +             G++
Sbjct: 4530 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTD------------KGEV 4577

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            FTWGD D G+LG G   A   P  V AL      +V+CG + T+A +T
Sbjct: 4578 FTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWST 4625



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 160/312 (51%), Gaps = 29/312 (9%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P   DA+  + ++ + C E     +++SG++Y          ++ +G+E     P+++ G
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVY----------MMYYGSETQY--PQRVYG 491

Query: 336 PLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 393
             E     ++S S G  H   +T    ++++G+G  G LGHGDR+    P+ V++L    
Sbjct: 492 FSEKPVTMIASHSDGT-HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKN 550

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
               ACG  ++A +             S+G+L+TWG G+ GRLGHG+ +  L+PT V AL
Sbjct: 551 ITFIACGSTYSAVL------------SSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTAL 598

Query: 454 VEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE 511
                  V+CG   S T+ +T +G V++ G   YG+LG    +G    ++  KL    V 
Sbjct: 599 NGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 658

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
           ++ CG    A LT+  EVYTWGKG   RLGHG+ +   +P ++E LK K+VK +  G   
Sbjct: 659 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFH 718

Query: 572 TAAICLHKWVSG 583
             A+   + V G
Sbjct: 719 VLALTEDQLVYG 730



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 146/287 (50%), Gaps = 27/287 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G +F WGE   DG LG G         V +D   P+ +ES     +++IACG  H+A +T
Sbjct: 3360 GKIFSWGEGE-DGKLGHG-------NSVSLDK--PRLIESLKSKRIRDIACGSGHSAAIT 3409

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+++WG    GRLGHG  +    PKL+ +L    V  VACG  +  T A+T  G +Y
Sbjct: 3410 SSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY 3469

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G     + P  ++  L G+ V  + CG   +  +T  G+++T+G G
Sbjct: 3470 SWG--DGDFGKLGRGGSDGCYTPLLIDR-LNGLGVVQIECGAQFSLALTKYGEVWTWGKG 3526

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG+   V  P  V+ L+G + V  A G  H  AV +            +G+++ 
Sbjct: 3527 DYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTD------------TGQVYA 3574

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            WGD D G+ G+G       P+ V  L +    +VSCG S ++A   T
Sbjct: 3575 WGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3621



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 135/259 (52%), Gaps = 18/259 (6%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G H   +T+   V+SWG   GGRLGHG       PKL++AL + N+  +ACG  ++  ++
Sbjct: 506 GTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS 565

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAG 359
            +G++YTWG    N+G LGHGN  ++ +P  L   L G  V  V+CG     T  VT++G
Sbjct: 566 SNGELYTWGRG--NYGRLGHGNSDNVLIP-TLVTALNGHMVVYVACGSGDSQTLCVTASG 622

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            +F++GDG +G LG G      TP+ VD L  +   +  CG            G  S++ 
Sbjct: 623 IVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCG------------GQFSAAL 670

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
            + G+++TWG G+  RLGHG++E    P  +  L      ++  G+   +ALT    VY 
Sbjct: 671 TAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYG 730

Query: 480 MGSPVYGQLGDPKANGKLP 498
            G   YGQ+ DP     +P
Sbjct: 731 WGRNDYGQI-DPALGTIVP 748



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 169/361 (46%), Gaps = 29/361 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P   ++   L ++ + C  R   +++  G V+         + +G  S+  +P+ +    
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVY--------MMYYG--SETQYPQRVYGFS 493

Query: 284 NINVELVACGEH--HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
              V ++A      H  A+T    +Y+WG  N + G LGHG+ +    PK +   ++  +
Sbjct: 494 EKPVTMIASHSDGTHYLALTQDSSVYSWG--NGDGGRLGHGDRVWYDEPKLVEALVDK-N 550

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ ++CG  ++AV++S G+L+T+G G +G LGHG+  +V  P  V +L G   V  ACG 
Sbjct: 551 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACG- 609

Query: 402 WHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
                         S + C  +SG +F+WGDG+ G+LG G  +    P  V  L++ N  
Sbjct: 610 -----------SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 658

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
           +V CG   + ALT  G VYT G     +LG          +V   L    V+E+  G++H
Sbjct: 659 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFH 718

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK 579
           V  LT    VY WG+   G++          P+L   L  K +  + CG + + A C   
Sbjct: 719 VLALTEDQLVYGWGRNDYGQIDPALGTIVPEPTLCPTLSGKNIIGLACGLTQSFAWCTSA 778

Query: 580 W 580
           W
Sbjct: 779 W 779



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 147/306 (48%), Gaps = 27/306 (8%)

Query: 172 SAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAV 231
           + ++S S G+ +        V+ WG   GDG       R G    V  D   PK VE+ V
Sbjct: 498 TMIASHSDGTHYLALTQDSSVYSWG--NGDG------GRLGHGDRVWYDE--PKLVEALV 547

Query: 232 VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA 291
             ++  IACG  ++A+++  GE+++WG    GRLGHG   +V  P L+ AL    V  VA
Sbjct: 548 DKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVA 607

Query: 292 C--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           C  G+  T  VT SG +++WG  + N+G LG G       PK ++  L+ I+V+ V CG 
Sbjct: 608 CGSGDSQTLCVTASGIVFSWG--DGNYGKLGRGGCDGSKTPKIVDKLLD-INVAKVYCGG 664

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             +A +T+ G+++T+G G    LGHG+   +  P+ ++ LK  +      G +H  A+ E
Sbjct: 665 QFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTE 724

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
             +            ++ WG  D G++          PT    L   N   ++CG + + 
Sbjct: 725 DQL------------VYGWGRNDYGQIDPALGTIVPEPTLCPTLSGKNIIGLACGLTQSF 772

Query: 470 ALTTTG 475
           A  T+ 
Sbjct: 773 AWCTSA 778



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 125/255 (49%), Gaps = 26/255 (10%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   +SL  LR V+   G     AV          
Sbjct: 4258 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVT--------- 4308

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GK++  G G  GRLG G  ++ +VPT + ++  V      V+ G    +AL++ G
Sbjct: 4309 ---ADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4365

Query: 476  HVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            HVY+ G    G+LG   +     P  +E  L    V+ IACG +H A +TS   +YTWGK
Sbjct: 4366 HVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWGK 4424

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG------V 584
            G  GRLGHGD++D+  P LVEAL+D +V  + CG+     +C+    + W  G      +
Sbjct: 4425 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4484

Query: 585  DQSMCSGCRIPFNFK 599
             +    GC+IP   +
Sbjct: 4485 GRGGSDGCKIPMKIE 4499



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 23/289 (7%)

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            SG +Y WG ++   G LG      + LP  L   L  +    ++ G      VT+ G+++
Sbjct: 4258 SGAIYGWGHNH--RGQLGGLEGAKVKLPV-LCESLSALRPVQLTGGEQTLLAVTADGKVY 4314

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC--GVWHTAAVVEVMVGSSSSSNC 420
              G G  G LG G   SV  P  ++S++ +   + A   G  H  A+             
Sbjct: 4315 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLAL------------S 4362

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            S G +++WG+GD G+LGHG++     P  +  L+      ++CG   + A+T+ G +YT 
Sbjct: 4363 SEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTW 4422

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANG 538
            G   YG+LG   +  +L  ++   L    V ++ACG  D     +T    V++WG G  G
Sbjct: 4423 GKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4482

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 583
            +LG G +D    P  +E+L    V  + CG+ F+ A+     ++ W  G
Sbjct: 4483 KLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4531



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 16/192 (8%)

Query: 423  GKLFTWGDGDRGRLGHGDK----EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
            GKL+  G+G  GRLG GD     E +L+P     +++         H+L  ALT  G ++
Sbjct: 3306 GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHAL--ALTQDGKIF 3363

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
            + G    G+LG   +      R+   L    + +IACG  H A +TS  E+YTWG G  G
Sbjct: 3364 SWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYG 3423

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGT------SFTAAICLHKWVSG----VDQSM 588
            RLGHGDT  +  P LV++L  ++V  + CG+      + TA   ++ W  G    + +  
Sbjct: 3424 RLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3483

Query: 589  CSGCRIPFNFKR 600
              GC  P    R
Sbjct: 3484 SDGCYTPLLIDR 3495



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 91/190 (47%), Gaps = 30/190 (15%)

Query: 139 ACGSVNS--LSSGG--------SDGRTGHLKGLSGDTFRVSLSSAVSSSSQ---GSGHDD 185
           ACGS  S  LSS G        + GR GH  G S +    +L +A++         G  D
Sbjct: 555 ACGSTYSAVLSSNGELYTWGRGNYGRLGH--GNSDNVLIPTLVTALNGHMVVYVACGSGD 612

Query: 186 GDSL-----GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
             +L     G VF WG+     +  GG   S +          PK V+  + ++V  + C
Sbjct: 613 SQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKT----------PKIVDKLLDINVAKVYC 662

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           GG+ +A +T  GEV++WG+  G RLGHG +  + +PK+I+ LK   V+ +  G  H  A+
Sbjct: 663 GGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLAL 722

Query: 301 TLSGDMYTWG 310
           T    +Y WG
Sbjct: 723 TEDQLVYGWG 732



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 60/147 (40%), Gaps = 15/147 (10%)

Query: 477  VYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VY  G     QLG  K +  KLP   E  L+K     IA G   + V++   ++Y  G+G
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSE-VLSKLKPIHIAGGSKTLFVVSQEGKLYACGEG 3314

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSGVDQSMC 589
             NGRLG GD  +   P L+  L    +K +   +    A+ L +      W  G D  + 
Sbjct: 3315 TNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLG 3374

Query: 590  SGCRIPFN-------FKRKRHNCYNCG 609
             G  +  +        K KR     CG
Sbjct: 3375 HGNSVSLDKPRLIESLKSKRIRDIACG 3401


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/420 (32%), Positives = 217/420 (51%), Gaps = 37/420 (8%)

Query: 162  SGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDS 221
            S DT R        + ++G+G D+ D    VF+WG     G LGG         G K+ S
Sbjct: 2849 SDDTLR--------NENKGTGIDNTDIDSRVFVWG-LNDKGQLGGC-------KGSKVKS 2892

Query: 222  FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
              P  +++   L   +IA G +   +VT  G+V+  GE   GRLG G   ++S P  +D 
Sbjct: 2893 --PTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDT 2950

Query: 282  LKNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
            L    V+ V    G  H+  +T  G +++WG G +   G LGHG+  S   P  +   LE
Sbjct: 2951 LNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGID---GKLGHGDVTSRLSPTLIEA-LE 3006

Query: 339  GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
               +  ++CG  H+A VT+ G+L+T+G G +G LGHGD  ++  P++V +L+  + +  A
Sbjct: 3007 SKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIA 3066

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            CG      +      + + +NC    +++WGDGD G+LG G  E   +P  + AL   + 
Sbjct: 3067 CGSRDAQTL------ALTDNNC----VWSWGDGDFGKLGRGGSEGCNIPQKIDALCGRDV 3116

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGD 517
            C+++CG   ++AL+TTG V+T G   Y +LG    ++ + P  +EG L K  + EIA G 
Sbjct: 3117 CRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGA 3176

Query: 518  YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL-VEALKDKQVKSIVCGTSFTAAIC 576
             H   +T   EVY+WG   +G+ G+G+T     P + +  L   ++  I CG+S + A C
Sbjct: 3177 LHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICLGELDGVKISHIACGSSHSIAWC 3236



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 196/384 (51%), Gaps = 25/384 (6%)

Query: 193  FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
            ++WG     G LGG         G K+ S V   + +A  L    +A G +   ++T +G
Sbjct: 3773 YVWGH-NHRGQLGG-------VQGTKVKSPVINDIIAA--LRPTAVAGGEQTLFILTSEG 3822

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG 310
            +V++ G    GRLG G   ++  P +I+ L+++ +E ++   G  H   +T + ++++WG
Sbjct: 3823 KVYASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWG 3882

Query: 311  GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
              +   G LGHG+++S   P+K+   L G  +  +SCG  H+A +TS G+L+T+G G +G
Sbjct: 3883 --DGEDGKLGHGDKLSSETPRKIEALL-GKQIVHISCGSSHSAAITSKGELYTWGKGRYG 3939

Query: 371  VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
             LGHGD      P+ +++LK  + +  ACG      +      + +  +C    +++WGD
Sbjct: 3940 RLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTL------AITDDDC----VWSWGD 3989

Query: 431  GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
            GD G+LG G  +    P  + +L+    C+V CG   +VALT  G +YT G   Y +LG 
Sbjct: 3990 GDYGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGH 4049

Query: 491  PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
               +     R    L    +  +A G  H    T   EV+TWG    G+LG+G  +    
Sbjct: 4050 GTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPE 4109

Query: 551  PSLVEALKDKQVKSIVCGTSFTAA 574
            P+LV  L++ ++  + CG++ + A
Sbjct: 4110 PTLVTVLENVKLNRVGCGSAHSFA 4133



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 163/327 (49%), Gaps = 21/327 (6%)

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
            + + WG    G+LG    + V  P + D +  +    VA GE     +T  G +Y  G  
Sbjct: 3771 KFYVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYASGLG 3830

Query: 313  NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS--SVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                  +G  + +   +   +  PL+ + +   SV  G  H  V+TS  ++F++GDG  G
Sbjct: 3831 GSGRLGIGRSDNI---VTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDG 3887

Query: 371  VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
             LGHGD++S  TPR++++L G + V  +CG  H+AA+             S G+L+TWG 
Sbjct: 3888 KLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAIT------------SKGELYTWGK 3935

Query: 431  GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQL 488
            G  GRLGHGD +  L P  + AL       V+CG   + T+A+T    V++ G   YG+L
Sbjct: 3936 GRYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKL 3995

Query: 489  GDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G   ++G K P R+E  L    V ++ CG      LT   ++YTWGKG   RLGHG  D 
Sbjct: 3996 GRGGSDGCKKPLRIES-LIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDH 4054

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L+ KQ+ ++  G+    A
Sbjct: 4055 VRRPRKVACLQGKQIVTVAAGSLHCVA 4081



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 142/283 (50%), Gaps = 23/283 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            +VF WG+   DG LG          G K+ S  P+ +E+ +   + +I+CG  H+A +T 
Sbjct: 3877 EVFSWGDGE-DGKLG---------HGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITS 3926

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            +GE+++WG+   GRLGHG   D   PKL++ALK+  V  VACG      + ++ D   W 
Sbjct: 3927 KGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWS 3986

Query: 311  GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
              + ++G LG G       P ++   L G+ V  V CG   +  +T  G L+T+G G + 
Sbjct: 3987 WGDGDYGKLGRGGSDGCKKPLRIES-LIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYY 4045

Query: 371  VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
             LGHG    V  PR+V  L+G + V  A G  H  A  +            +G++FTWGD
Sbjct: 4046 RLGHGTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTD------------AGEVFTWGD 4093

Query: 431  GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
             D G+LG+G       PT V  L      +V CG + + A +T
Sbjct: 4094 NDEGQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFAWST 4136



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 147/299 (49%), Gaps = 24/299 (8%)

Query: 224 PKAVESAVVLDVQNIACG--GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS-HPKLID 280
           P  ++S + + ++ IA    G H   ++  G V+SWG   GGRLGHG   D+   P+L+ 
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHG---DIRREPELVK 558

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
            L N  +  +ACG  ++ AVT +G++YTWG  +  +G LGHGN     LP  + G L G 
Sbjct: 559 ELVNKKITQIACGSTYSAAVTSNGELYTWGRGS--YGRLGHGNSEDRLLPTLVAG-LSGS 615

Query: 341 HVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           HV  V+CG    HT  +   G ++++GDG +G LG G       P+ V++LK        
Sbjct: 616 HVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKH------- 668

Query: 399 CGVWHTAAVVEVMVGSSSSSNC-SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
               H   +V V+ GS  S      G ++TWG  D  RLGHG  +    P  V  L+  +
Sbjct: 669 ----HNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYH 724

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
              ++ G S  +ALT    ++T GS V             PT +   + K F+  +ACG
Sbjct: 725 IVDIAVGPSHCLALTDNCQIFTWGSDVQKYALSSDNYNMEPTCISA-INKEFIAGVACG 782



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 163/352 (46%), Gaps = 38/352 (10%)

Query: 225 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN 284
           K  E+   L ++ I C   +   +T  G V+S             ++    P L+D+L +
Sbjct: 461 KIYETVAELGIKQIMCSSDNIIALTNNGRVYSLA----------YNARCEAPVLLDSLID 510

Query: 285 INVELVAC---GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           I ++ +A    GEH+  A++  G +Y+WG  +   G LGHG+   +    +L   L    
Sbjct: 511 IKIKKIAANVEGEHYL-ALSSDGCVYSWGSGDG--GRLGHGD---IRREPELVKELVNKK 564

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ ++CG  ++A VTS G+L+T+G G++G LGHG+      P  V  L G   V  ACG 
Sbjct: 565 ITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGS 624

Query: 402 --WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN-- 457
              HT A+ +             G +++WGDGD G+LG G  +   VP  V  L   N  
Sbjct: 625 GDAHTLAIDK------------DGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKY 672

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACG 516
              V CG   +VAL   G V+T G     +LG    +  + P  VEG +  + V+ IA G
Sbjct: 673 IVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVD-IAVG 731

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
             H   LT   +++TWG          D  +   P+ + A+  + +  + CG
Sbjct: 732 PSHCLALTDNCQIFTWGSDVQKYALSSDNYNME-PTCISAINKEFIAGVACG 782



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 160/337 (47%), Gaps = 41/337 (12%)

Query: 247 LVTKQGEVFSWGE--ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
           L T + EV  WG    LGG      +S+    K+ + +  + ++ + C   +  A+T +G
Sbjct: 435 LSTPKTEVLGWGNINWLGG------ESNDGSLKIYETVAELGIKQIMCSSDNIIALTNNG 488

Query: 305 DMYTWG-GSNCNFG-LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            +Y+    + C    LL    ++ +   KK+   +EG H  ++S          S G ++
Sbjct: 489 RVYSLAYNARCEAPVLLDSLIDIKI---KKIAANVEGEHYLALS----------SDGCVY 535

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           ++G G  G LGHGD      P  V  L   +  + ACG  ++AAV             S+
Sbjct: 536 SWGSGDGGRLGHGD--IRREPELVKELVNKKITQIACGSTYSAAVT------------SN 581

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTM 480
           G+L+TWG G  GRLGHG+ E RL+PT VA L   +   V+CG   + T+A+   G V++ 
Sbjct: 582 GELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSW 641

Query: 481 GSPVYGQLGDPKANG-KLPTRVEG-KLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
           G   YG+LG   ++  K+P  VE  K    ++  + CG      L     V+TWGK    
Sbjct: 642 GDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGY 701

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           RLGHG  D   +P +VE L +  +  I  G S   A+
Sbjct: 702 RLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLAL 738



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 128/272 (47%), Gaps = 24/272 (8%)

Query: 150  GSDGRTGHLKGLSGDTFR---VSLSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILG 205
            G DG+ GH   LS +T R     L   +   S GS H     S G+++ WG+    G  G
Sbjct: 3884 GEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGK----GRYG 3939

Query: 206  GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL--VTKQGEVFSWGEELGG 263
               H  G       D   PK +E+     V ++ACG   A    +T    V+SWG+   G
Sbjct: 3940 RLGHGDGD------DCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYG 3993

Query: 264  RLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN 323
            +LG G       P  I++L  + V  V CG   + A+T +GD+YTWG    ++  LGHG 
Sbjct: 3994 KLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKG--DYYRLGHGT 4051

Query: 324  EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 383
               +  P+K+   L+G  + +V+ G  H    T AG++FT+GD   G LG+G    +  P
Sbjct: 4052 NDHVRRPRKV-ACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEP 4110

Query: 384  REVDSLKGLRTVRAACG-----VWHTAAVVEV 410
              V  L+ ++  R  CG      W T A +++
Sbjct: 4111 TLVTVLENVKLNRVGCGSAHSFAWSTEAPIDI 4142



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 30/307 (9%)

Query: 174 VSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
           ++++ +G  +    S G V+ WG   G  +  G I R             P+ V+  V  
Sbjct: 516 IAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDIRRE------------PELVKELVNK 563

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC- 292
            +  IACG  ++A VT  GE+++WG    GRLGHG   D   P L+  L   +V  VAC 
Sbjct: 564 KITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACG 623

Query: 293 -GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEGIHVSSVSCGPW 350
            G+ HT A+   G +++WG  + ++G LG G      +PK +        ++ +V CG  
Sbjct: 624 SGDAHTLAIDKDGIVWSWG--DGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQ 681

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            +  +   G ++T+G      LGHG    V  P+ V+ L     V  A G  H  A+ + 
Sbjct: 682 FSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTD- 740

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                   NC   ++FTWG  D  +         + PTC++A+ +     V+CG +    
Sbjct: 741 --------NC---QIFTWG-SDVQKYALSSDNYNMEPTCISAINKEFIAGVACGPAQNFL 788

Query: 471 LTTTGHV 477
            T+ G +
Sbjct: 789 WTSGGKL 795



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 138/286 (48%), Gaps = 23/286 (8%)

Query: 311  GSNCNFGLLGHGNEMSL-------WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            GSN  F + GH +   L            +N  +  +  ++V+ G     ++TS G+++ 
Sbjct: 3767 GSNHKFYVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYA 3826

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
             G G  G LG G   ++ TP  ++ L+ L+  + +    H+        G  +    S+ 
Sbjct: 3827 SGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSV---HSG-------GRHAMVLTSNF 3876

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            ++F+WGDG+ G+LGHGDK +   P  + AL+      +SCG S + A+T+ G +YT G  
Sbjct: 3877 EVFSWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKG 3936

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGRLG 541
             YG+LG    +  L  ++   L    V ++AC  GD     +T    V++WG G  G+LG
Sbjct: 3937 RYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLG 3996

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
             G +D    P  +E+L    V  + CG+ F+ A+     L+ W  G
Sbjct: 3997 RGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKG 4042



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 119/250 (47%), Gaps = 28/250 (11%)

Query: 360  QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            ++F +G    G LG      V +P E+ ++  LR V  A G   T  +V           
Sbjct: 2870 RVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGS-KTVFIVTY--------- 2919

Query: 420  CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ---VSCGHSLTVALTTTGH 476
               GK++  G+G  GRLG G+ E   +P  +  L   +F +   V  G   ++ +T  G 
Sbjct: 2920 --DGKVYVSGEGANGRLGLGNTENISIPVQLDTL-NMHFVKKVTVHPGGRHSLCITREGK 2976

Query: 477  VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            V++ G  + G+LG      +L PT +E  L    + EIACG  H A +T+  E+YTWG G
Sbjct: 2977 VFSWGEGIDGKLGHGDVTSRLSPTLIEA-LESKLIVEIACGSSHSAAVTADGELYTWGLG 3035

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT------SFTAAICLHKWVSG----VD 585
              GRLGHGD+   + P  V+AL+D +V  I CG+      + T   C+  W  G    + 
Sbjct: 3036 DYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLG 3095

Query: 586  QSMCSGCRIP 595
            +    GC IP
Sbjct: 3096 RGGSEGCNIP 3105



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 110/244 (45%), Gaps = 32/244 (13%)

Query: 136 SESACGSVNS---LSSG-------GSDGRTGHLKGLSGDTFRVSLSSAVSSS---SQGSG 182
           ++ ACGS  S    S+G       GS GR GH  G S D    +L + +S S       G
Sbjct: 566 TQIACGSTYSAAVTSNGELYTWGRGSYGRLGH--GNSEDRLLPTLVAGLSGSHVVDVACG 623

Query: 183 HDDGDSLG---DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD--VQN 237
             D  +L    D  +W    GD    G + R GS         VPK VE+    +  + N
Sbjct: 624 SGDAHTLAIDKDGIVWSWGDGDY---GKLGRGGSDC-----CKVPKVVETLKHHNKYIVN 675

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           + CG + +  + K G V++WG+  G RLGHG    V +PK+++ L N ++  +A G  H 
Sbjct: 676 VLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHC 735

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+T +  ++TWG     + L      M       +N       ++ V+CGP    + TS
Sbjct: 736 LALTDNCQIFTWGSDVQKYALSSDNYNMEPTCISAINKEF----IAGVACGPAQNFLWTS 791

Query: 358 AGQL 361
            G+L
Sbjct: 792 GGKL 795



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 25/169 (14%)

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE----EIACGDYHVAVLT 524
           +AL++ G VY+ GS   G+LG    +G +  R E +L K  V     +IACG  + A +T
Sbjct: 526 LALSSDGCVYSWGSGDGGRLG----HGDI--RREPELVKELVNKKITQIACGSTYSAAVT 579

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK----- 579
           S  E+YTWG+G+ GRLGHG+++DR  P+LV  L    V  + CG+     + + K     
Sbjct: 580 SNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVW 639

Query: 580 -WVSGVDQSMCSG----CRIPFNFKR-KRHNCYNCGLVYCHTCSSKKSV 622
            W  G    +  G    C++P   +  K HN Y   ++    C S+ SV
Sbjct: 640 SWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVL----CGSQFSV 684


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/325 (38%), Positives = 175/325 (53%), Gaps = 18/325 (5%)

Query: 235 VQNIACGGRHAALVTKQG-EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           + ++ CG  H    ++ G EV+SWG    GRLGHG  SD+  P  I AL  I ++ +ACG
Sbjct: 69  IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           + H  AVT+ G++ +WG  N N G LG G+     +P+K+    EGI +  V+ G  HTA
Sbjct: 129 DSHCLAVTMEGEVQSWG-RNQN-GQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTA 185

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            VT  G L+ +G G +G LG GDR     P  V S  G +    ACG  HT +V      
Sbjct: 186 AVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV------ 239

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                   SG L+T+G    G+LGHGD E  L+P  + AL      Q+S G   T+ALT+
Sbjct: 240 ------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTS 293

Query: 474 TGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            G +Y  G   +GQ+G      +  P +V     +  V+ ++CG  H   +T R  V+ W
Sbjct: 294 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAW 352

Query: 533 GKGANGRLGHGDTDDRNFPSLVEAL 557
           G+G NG+LG G++ DRNFP ++EAL
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEAL 377



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 179/369 (48%), Gaps = 22/369 (5%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H+  +     V SWG    G+LGHG   D   P  + AL    +  V CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 298 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + SG ++Y+WG  +  FG LGHGN   L+ P  +   L GI +  ++CG  H   VT
Sbjct: 80  VAYSQSGMEVYSWGWGD--FGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 136

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG GD      P+++ + +G+R    A G  HTAAV E       
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 G L+ WG G  G LG GD+  RLVP  V +        V+CG   T++++ +G 
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +YT G   YGQLG       L P ++E  L+ +F+ +I+ G  H   LTS  ++Y WG  
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 591
             G++G G+  D+  P  V    D++V  + CG   T A+     +  W  G +  +  G
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363

Query: 592 CRIPFNFKR 600
             +  NF +
Sbjct: 364 ESVDRNFPK 372



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 136/270 (50%), Gaps = 15/270 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D F P  +++   + ++ IACG  H   VT +GEV SWG    G+LG G   D   P+ I
Sbjct: 107 DLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 166

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            A + I +++VA G  HT AVT  GD+Y WG     +G LG G+     +P+++     G
Sbjct: 167 QAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWG--RYGNLGLGDRNDRLVPERVT-SAGG 223

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
             +S V+CG  HT  V+ +G L+T+G   +G LGHGD      P ++++L      + + 
Sbjct: 224 EKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISG 283

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           G  HT A+             S GKL+ WG    G++G G+   +  P  V    +    
Sbjct: 284 GWRHTMALT------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVV 331

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           QVSCG   T+A+T   +V+  G    GQLG
Sbjct: 332 QVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/357 (36%), Positives = 188/357 (52%), Gaps = 21/357 (5%)

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
            VP+AV+  V L   ++A G +   LVT+ G+ ++ GE   GRLG G   +V+ P  I AL
Sbjct: 2721 VPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITAL 2780

Query: 283  KNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
                V  VA   G  H  A+T  G +++WG  +   G LGHG+  SL  P+ +   L G 
Sbjct: 2781 SQHVVRKVAVHSGGRHALALTADGRVFSWGEGD--DGKLGHGDVTSLDTPRCIEA-LNGF 2837

Query: 341  HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
             V  V+ G  H+A VTS+G+L+T+G G +G LGHGD ++  TP+ V+SL G R V+ +CG
Sbjct: 2838 RVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCG 2897

Query: 401  V--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
                 T A+VE             G +++WGDGD G+LG G  E    P  V  L     
Sbjct: 2898 SRDAQTLALVE------------GGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGV 2945

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGD 517
            C V CG   +VALT  GHVYT G   Y +LG     + + PT VEG   K  +  ++ G 
Sbjct: 2946 CHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKVI-GVSVGA 3004

Query: 518  YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             H   +T   +V+ WG   +G+ G+G       P+LV+ +   ++  + CG+S + A
Sbjct: 3005 LHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVACGSSHSVA 3061



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 138/411 (33%), Positives = 204/411 (49%), Gaps = 39/411 (9%)

Query: 195  WGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGE 253
            W    G  I G G +  G   GV+     VP   E+   L    +A G +    +T  G 
Sbjct: 3608 WTAVGGGQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGR 3667

Query: 254  VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG- 310
            V++ G   GGRLG G    V+ P L+++L+++ V+ VA   G  H  A++  G++Y+WG 
Sbjct: 3668 VYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGE 3727

Query: 311  GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            G +   G LGHGN++    P+ +   L G  V  V+CG  H+A +T+ G+L+T+G G +G
Sbjct: 3728 GED---GKLGHGNKLPCDRPRIIES-LRGKDVVDVACGGAHSAAITALGELYTWGKGRYG 3783

Query: 371  VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-----SGKL 425
             LGHGD      P+ V++L G R +  ACG             S  +  C+      G +
Sbjct: 3784 RLGHGDSDDQLKPKLVEALLGYRVMDVACG-------------SGDAQTCAITDEEGGTV 3830

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            ++WGDGD G+LG G  +   +PT + +L      +V CG   +VAL+  G VYT G   Y
Sbjct: 3831 WSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDY 3890

Query: 486  GQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
             +LG     + + P +V     K  +  I+ G  H  V T + EVYTWG    G+LG G 
Sbjct: 3891 HRLGHGVDEHVRRPKKVMTLQGKKVIS-ISTGALHCVVCTDQGEVYTWGDNDEGQLGDGT 3949

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIP 595
            T     P LV AL++K++  + CG++ T A     W      S C GC  P
Sbjct: 3950 TTGIQKPRLVAALQNKKINRVSCGSAHTVA-----W------STCKGCSTP 3989



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 167/342 (48%), Gaps = 39/342 (11%)

Query: 248  VTKQGEVFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            V+    V+ WG    E+LGG  G    S +  P+ +D   ++    VA G      VT S
Sbjct: 2694 VSGAKRVYVWGLNDKEQLGGPKG----SKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQS 2749

Query: 304  GDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS-------SVSCGPWHTAVV 355
            G  Y  G GSN   GL GH         + +N P +   +S       +V  G  H   +
Sbjct: 2750 GKAYACGEGSNGRLGL-GHS--------RNVNSPHQITALSQHVVRKVAVHSGGRHALAL 2800

Query: 356  TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            T+ G++F++G+G  G LGHGD  S+ TPR +++L G R    A G  H+AAV        
Sbjct: 2801 TADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVT------- 2853

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTT 473
                 SSG+L+TWG G+ GRLGHGD   +L P  V +LV     QVSCG   + T+AL  
Sbjct: 2854 -----SSGELYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVE 2908

Query: 474  TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
             G VY+ G   +G+LG   + G     +  KL+   V  + CG      LT    VYTWG
Sbjct: 2909 GGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWG 2968

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            KG   RLGHG      +P+LVE L+ K+V  +  G     A+
Sbjct: 2969 KGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAV 3010



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/288 (36%), Positives = 144/288 (50%), Gaps = 19/288 (6%)

Query: 241  GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
            GGRHA  +T  G VFSWGE   G+LGHG  + +  P+ I+AL    V  VA G +H+ AV
Sbjct: 2793 GGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAV 2852

Query: 301  TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSA 358
            T SG++YTWG     +G LGHG+ ++   PK++   L G  V  VSCG     T  +   
Sbjct: 2853 TSSGELYTWGLG--EYGRLGHGDNLTQLTPKRVES-LVGQRVVQVSCGSRDAQTLALVEG 2909

Query: 359  GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            G ++++GDG FG LG G     S+P  VD L GL      CG   + A+           
Sbjct: 2910 GLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALT---------- 2959

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
               +G ++TWG GD  RLGHG  +    PT V  L       VS G    +A+T  G V+
Sbjct: 2960 --CNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVF 3017

Query: 479  TMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
              G   +GQ G+      + PT V+G +    +  +ACG  H    T+
Sbjct: 3018 AWGDNDHGQQGNGSITVNRRPTLVQG-IDGIKITRVACGSSHSVAWTA 3064



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/288 (34%), Positives = 150/288 (52%), Gaps = 29/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG          G K+    P+ +ES    DV ++ACGG H+A +T
Sbjct: 3720 GEVYSWGEGE-DGKLG---------HGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAIT 3769

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVT--LSGD 305
              GE+++WG+   GRLGHG   D   PKL++AL    V  VAC  G+  TCA+T    G 
Sbjct: 3770 ALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGT 3829

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +++WG  + ++G LG G      +P K+   L G+ +  V CG   +  +++ G ++T+G
Sbjct: 3830 VWSWG--DGDYGKLGRGGSDGCKIPTKIES-LSGLGIIKVECGSQFSVALSNNGSVYTWG 3886

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
             G +  LGHG    V  P++V +L+G + +  + G  H     +             G++
Sbjct: 3887 KGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTD------------QGEV 3934

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            +TWGD D G+LG G       P  VAAL      +VSCG + TVA +T
Sbjct: 3935 YTWGDNDEGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAHTVAWST 3982



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 140/285 (49%), Gaps = 27/285 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG G   S       +D+  P+ +E+     V+++A G  H+A VT
Sbjct: 2804 GRVFSWGE-GDDGKLGHGDVTS-------LDT--PRCIEALNGFRVRDVAAGSNHSAAVT 2853

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+++WG    GRLGHG +     PK +++L    V  V+CG  +  T A+   G +Y
Sbjct: 2854 SSGELYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVY 2913

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G       P  L   L G+ V  V CG   +  +T  G ++T+G G
Sbjct: 2914 SWG--DGDFGKLGRGGSEGCSSP-CLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKG 2970

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  P  V+ L+G + +  + G  H  AV +            +G++F 
Sbjct: 2971 DYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTD------------AGQVFA 3018

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            WGD D G+ G+G       PT V  +      +V+CG S +VA T
Sbjct: 3019 WGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVACGSSHSVAWT 3063



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 10/172 (5%)

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
            SS   + +++ WG  D+ +LG G K +++ VP  V   V      V+ G      +T +G
Sbjct: 2692 SSVSGAKRVYVWGLNDKEQLG-GPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSG 2750

Query: 476  HVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTW 532
              Y  G    G+LG   + N   P ++   L+++ V ++A   G  H   LT+   V++W
Sbjct: 2751 KAYACGEGSNGRLGLGHSRNVNSPHQITA-LSQHVVRKVAVHSGGRHALALTADGRVFSW 2809

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
            G+G +G+LGHGD    + P  +EAL   +V+ +  G++ +AA+     L+ W
Sbjct: 2810 GEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTW 2861


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 182/340 (53%), Gaps = 18/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D  VP  +       + ++ CG  H  A   ++ +V+SWG    GRLGHG  SDV  P+ 
Sbjct: 60  DRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQP 119

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           + AL+ I ++ +ACG+ H  AVT+ G++ +WG  N N G LG G      LP+K+    E
Sbjct: 120 VRALQGIKIKQMACGDSHCLAVTMGGEVQSWG-RNQN-GQLGLGTTEDSLLPQKIQ-AFE 176

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           GI V  ++ G  HTA VT  G L+ +G G +G LG GDR     P +V  ++G + V  A
Sbjct: 177 GICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIA 236

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT  V             SSG L+T+G    G+LGHGD E  L P  V AL + + 
Sbjct: 237 CGWRHTITV------------SSSGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSST 284

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGD 517
            Q+S G   T+ALT+ G +Y  G   +GQ+G   +     P +V     +  V ++ACG 
Sbjct: 285 SQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQK-VAQVACGW 343

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H    T +  V+ WG+G +G+LGHG+  DRN P +++A+
Sbjct: 344 RHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAI 383



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 88/171 (51%), Gaps = 2/171 (1%)

Query: 407 VVEVMVGSSSSSNCSSGKLF-TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
           VV V  G+S S     G +  +WG G+ G+LGHGD E RLVPT ++    P    V CG 
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGA 82

Query: 466 SLTVALTTT-GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
             T A +     VY+ G   +G+LG   ++     +    L    ++++ACGD H   +T
Sbjct: 83  DHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVT 142

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              EV +WG+  NG+LG G T+D   P  ++A +   VK I  G   TAA+
Sbjct: 143 MGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAV 193



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 1/118 (0%)

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYH 519
           VS G S +VAL     + + G    GQLG   A  +L PT + G         I   D+ 
Sbjct: 26  VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHT 85

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            A      +VY+WG G  GRLGHG++ D   P  V AL+  ++K + CG S   A+ +
Sbjct: 86  TAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTM 143


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/325 (38%), Positives = 175/325 (53%), Gaps = 18/325 (5%)

Query: 235 VQNIACGGRHAALVTKQG-EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           + ++ CG  H    ++ G EV+SWG    GRLGHG  SD+  P  I AL  I ++ +ACG
Sbjct: 58  IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 117

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           + H  AVT+ G++ +WG  N N G LG G+     +P+K+    EGI +  V+ G  HTA
Sbjct: 118 DSHCLAVTMEGEVQSWG-RNQN-GQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTA 174

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            VT  G L+ +G G +G LG GDR     P  V S  G +    ACG  HT +V      
Sbjct: 175 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV------ 228

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                   SG L+T+G    G+LGHGD E  L+P  + AL      Q+S G   T+ALT+
Sbjct: 229 ------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTS 282

Query: 474 TGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            G +Y  G   +GQ+G      +  P +V     +  V+ ++CG  H   +T R  V+ W
Sbjct: 283 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAW 341

Query: 533 GKGANGRLGHGDTDDRNFPSLVEAL 557
           G+G NG+LG G++ DRNFP ++EAL
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIEAL 366



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 179/369 (48%), Gaps = 22/369 (5%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H+  +     V SWG    G+LGHG   D   P  + AL    +  V CG  HT
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 68

Query: 298 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + SG ++Y+WG  +  FG LGHGN   L+ P  +   L GI +  ++CG  H   VT
Sbjct: 69  VAYSQSGMEVYSWGWGD--FGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 125

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG GD      P+++ + +G+R    A G  HTAAV E       
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 178

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 G L+ WG G  G LG GD+  RLVP  V +        V+CG   T++++ +G 
Sbjct: 179 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +YT G   YGQLG       L P ++E  L+ +F+ +I+ G  H   LTS  ++Y WG  
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGFRHTMALTSDGKLYGWGWN 292

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 591
             G++G G+  D+  P  V    D++V  + CG   T A+     +  W  G +  +  G
Sbjct: 293 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 352

Query: 592 CRIPFNFKR 600
             +  NF +
Sbjct: 353 ESVDRNFPK 361



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 173/381 (45%), Gaps = 49/381 (12%)

Query: 127 AAPPKVLLPSESACGSVNSLSSG-------GSDGRTGH-----------LKGLSGDTFRV 168
           A P KVL+ S  A  SV  LS         G DG+ GH           L  L G    V
Sbjct: 1   APPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQI-V 59

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
           S++     +   S      S  +V+ WG         G   R G   G   D F P  ++
Sbjct: 60  SVTCGADHTVAYS-----QSGMEVYSWGW--------GDFGRLGH--GNSSDLFTPLPIK 104

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           +   + ++ IACG  H   VT +GEV SWG    G+LG G   D   P+ I A + I ++
Sbjct: 105 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK 164

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
           +VA G  HT AVT  GD+Y WG     +G LG G+     +P+++     G  +S V+CG
Sbjct: 165 MVAAGAEHTAAVTEDGDLYGWGWG--RYGNLGLGDRTDRLVPERVT-STGGEKMSMVACG 221

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             HT  V+ +G L+T+G   +G LGHGD      P ++++L      + + G  HT A+ 
Sbjct: 222 WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALT 281

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                       S GKL+ WG    G++G G+   +  P  V    +    QVSCG   T
Sbjct: 282 ------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 329

Query: 469 VALTTTGHVYTMGSPVYGQLG 489
           +A+T   +V+  G    GQLG
Sbjct: 330 LAVTERNNVFAWGRGTNGQLG 350


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/376 (33%), Positives = 199/376 (52%), Gaps = 33/376 (8%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   +   PK +E   + D+Q IA G  H+  +TK G+V+S+G  L GRLGHG       
Sbjct: 63  GDTANQLAPKKIEG--LSDIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLE 120

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK I+ L +I  + +A G+ H+ A+T SGD+Y++G        LGHGN      PKK+  
Sbjct: 121 PKKIEGLSDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG---LGHGNTEDQSTPKKIES 175

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
             +   V +++ G  H+  +T +G +++FG G FG LGHGD  S   P++++ L  ++ +
Sbjct: 176 LSD---VQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLEPKKIEDLSDIQAI 232

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            A               G+ S +   SG ++++G G  G+LGHGD E +L P  +  L +
Sbjct: 233 AAG--------------GNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKIEDLSD 278

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA 514
                    HSL  ALT +G VY+ G    GQLG    + +L P ++EG      ++ IA
Sbjct: 279 IQAVAAGANHSL--ALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGL---KDIQAIA 333

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            GD+H   LT   +VY++G G +G LGHGDT ++  P  +E L D  +++I  G + + A
Sbjct: 334 AGDFHSLALTKSGDVYSFGNGTSG-LGHGDTANQLEPKKIEGLTD--IQAIAAGANHSLA 390

Query: 575 ICLHKWVSGVDQSMCS 590
           + + +  S +D    S
Sbjct: 391 LAVEEQDSTIDPDEAS 406



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/324 (35%), Positives = 186/324 (57%), Gaps = 30/324 (9%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           VFS+G  + G+LGHG  ++   PK I+ L +I  + +A G +H+ A+T SGD+Y++G   
Sbjct: 49  VFSFGMGMYGKLGHGDTANQLAPKKIEGLSDI--QAIAAGTNHSLALTKSGDVYSFG--F 104

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
             FG LGHGN  S   PKK+ G  +   + +++ G +H+  +T +G +++FG+GT G LG
Sbjct: 105 GLFGRLGHGNTDSQLEPKKIEGLSD---IQAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160

Query: 374 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
           HG+    STP++++SL  ++ + A               G+ S +   SG ++++G G  
Sbjct: 161 HGNTEDQSTPKKIESLSDVQAIAAG--------------GNHSLALTKSGDVYSFGFGLF 206

Query: 434 GRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA 493
           GRLGHGD +++L P  +  L +         HSL  ALT +G VY+ G  ++GQLG    
Sbjct: 207 GRLGHGDTDSQLEPKKIEDLSDIQAIAAGGNHSL--ALTKSGDVYSFGWGLHGQLGHGDT 264

Query: 494 NGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
             +L P ++E  L+   ++ +A G  H   LT   EVY++G+G  G+LGHGDTDD+  P 
Sbjct: 265 ENQLTPKKIE-DLSD--IQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPK 321

Query: 553 LVEALKDKQVKSIVCGTSFTAAIC 576
            +E LKD  +++I  G   + A+ 
Sbjct: 322 KIEGLKD--IQAIAAGDFHSLALT 343



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 152/285 (53%), Gaps = 41/285 (14%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GDV+ +G  T           SG   G   D   PK +ES  + DVQ IA GG H+  +T
Sbjct: 147 GDVYSFGNGT-----------SGLGHGNTEDQSTPKKIES--LSDVQAIAAGGNHSLALT 193

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           K G+V+S+G  L GRLGHG       PK I+ L +I  + +A G +H+ A+T SGD+Y++
Sbjct: 194 KSGDVYSFGFGLFGRLGHGDTDSQLEPKKIEDLSDI--QAIAAGGNHSLALTKSGDVYSF 251

Query: 310 GGSNCNFGL---LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           G     +GL   LGHG+  +   PKK+    +   + +V+ G  H+  +T +G++++FG 
Sbjct: 252 G-----WGLHGQLGHGDTENQLTPKKIEDLSD---IQAVAAGANHSLALTKSGEVYSFGR 303

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G  G LGHGD     TP++++ LK ++ +  A G +H+ A+ +            SG ++
Sbjct: 304 GNTGQLGHGDTDDQLTPKKIEGLKDIQAI--AAGDFHSLALTK------------SGDVY 349

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
           ++G+G  G LGHGD   +L P  +  L +         HSL +A+
Sbjct: 350 SFGNGTSG-LGHGDTANQLEPKKIEGLTDIQAIAAGANHSLALAV 393



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 94/162 (58%), Gaps = 9/162 (5%)

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
           S +N +   +F++G G  G+LGHGD   +L P  +  L +         HSL  ALT +G
Sbjct: 40  SETNANLVSVFSFGMGMYGKLGHGDTANQLAPKKIEGLSDIQAIAAGTNHSL--ALTKSG 97

Query: 476 HVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            VY+ G  ++G+LG    + +L P ++EG    + ++ IA GD+H   LT   +VY++G 
Sbjct: 98  DVYSFGFGLFGRLGHGNTDSQLEPKKIEG---LSDIQAIAAGDFHSLALTKSGDVYSFGN 154

Query: 535 GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
           G +G LGHG+T+D++ P  +E+L D  V++I  G + + A+ 
Sbjct: 155 GTSG-LGHGNTEDQSTPKKIESLSD--VQAIAAGGNHSLALT 193


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/388 (35%), Positives = 200/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  +P A  S      Q + CG     ++  
Sbjct: 4001 DVYLWGA-----------GRHGQLAEAGRNVMIPAAAPS--FSPAQQVVCGQNCTFVIQA 4047

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4048 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4107

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVT+ G+LFTFG+G
Sbjct: 4108 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4164

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4165 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV-----------STDGSMVWA 4213

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4214 FGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4273

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P +V   L   F+E+IA G  H   L+S  +VY WG  + G+LG G T+
Sbjct: 4274 LPEGRARNHNRPQQVP-LLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTN 4332

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4333 HVREPTLVTVLQGKNVRQISAGRCHSAA 4360



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLASS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDIINVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVGGLDGIAIQQISAGTSHSLA 732



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 161/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 4001 DVYLWGAGRHGQLAEAGRNVMIPAAAPSFSPA------QQVVCGQNCTFVIQANGTVLAC 4054

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4055 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             + GKLF
Sbjct: 4112 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLF 4159

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + TVA++T G  V+  G   Y
Sbjct: 4160 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDY 4219

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4220 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4279

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  V  L    ++ I  G   T A+
Sbjct: 4280 RNHNRPQQVPLLAGVFIEDIAVGAEHTLAL 4309



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 132/276 (47%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4090 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4149

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4150 AVVTADGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVST 4206

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4207 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTF 4266

Query: 409  -------------------------------EVMVGSSSSSNCSS-GKLFTWGDGDRGRL 436
                                           ++ VG+  +   SS G ++ WG    G+L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4326

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4327 GLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4362



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 156/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK  +   +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLASSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V+  +    V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIIN---VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 66/220 (30%)

Query: 190 GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           G+++ WGE  GD G LG G   S +         +P  V+   +++V  ++CG  H   +
Sbjct: 530 GELYTWGE--GDFGRLGHGDSNSRN---------IPTLVKD--IINVGEVSCGSSHTIAL 576

Query: 249 TKQGE-VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +K G  V+S+G    G+LGHG  + V  PK+I+AL+ + +  V  G   + A+T +G +Y
Sbjct: 577 SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636

Query: 308 TWGGSNC---------------------------NFG-----LLGHGNEMSLW------- 328
            WG   C                           + G      L H NE+  W       
Sbjct: 637 AWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 329 -----------LPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
                       PKK+ G L+GI +  +S G  H+   T+
Sbjct: 697 CGQGNSTGPITKPKKVGG-LDGIAIQQISAGTSHSLAWTA 735



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ V     + +++IA G  H   ++  G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4285 PQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4344

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4345 GKNVRQISAGRCHSAAWT 4362


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2713 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2762

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 2822

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 2823 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 2879

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 2880 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 2929

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 2930 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2989

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 2990 GHGTDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3048

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3049 NRKPTLVQGLEGQKITRVACGSSHSVA 3075



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 191/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3708 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATGYGA 3767

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3768 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 3825

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  ++ G  H+A +T+AG L+T+G G +G LGHGD   
Sbjct: 3826 GHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSED 3884

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 3885 QLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 3932

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 3933 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3992

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 3993 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4051

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 4052 LQGKKINRVACGSAHTLA 4069



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2763 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSNYVVKKVAVHSGGRHAMA 2813

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G++FSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 2814 LTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 2873

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG--PWHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 2874 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 2930

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 2931 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 2978

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T TG VY  G   +
Sbjct: 2979 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3038

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3039 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3078



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 156/314 (49%), Gaps = 38/314 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V +IA GG H+A 
Sbjct: 3810 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDIAAGGAHSAC 3859

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G++++WG+   GRLGHG   D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 3860 ITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT 3919

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 3920 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3978

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 3979 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4026

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4027 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4073

Query: 488  LGDPKANGKLPTRV 501
               P   GKLPT+V
Sbjct: 4074 --KPANAGKLPTQV 4085



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 166/333 (49%), Gaps = 22/333 (6%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y 
Sbjct: 2708 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2767

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 2768 CG--EATNGRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRHAMALTVDGKIFSWG 2824

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 2825 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGEL 2872

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 2873 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2932

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGH
Sbjct: 2933 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2991

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P +VE L+ K++  +  G     A+
Sbjct: 2992 GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3024



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 179/394 (45%), Gaps = 34/394 (8%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATGY 3765

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3766 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3822

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A +             ++G L+TWG
Sbjct: 3823 GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT------------AAGDLYTWG 3870

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGHGD E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 3871 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 3930

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 3931 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3989

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAIC-----LHKWVSGVDQSMCSGC-------RI 594
                P  V+ L+ K+V +I  G S     C     ++ W    +  +  G        R+
Sbjct: 3990 HVRRPRQVQGLQGKKVIAIATG-SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 4048

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAP 628
                + K+ N   CG  +    S+ K   A   P
Sbjct: 4049 VAALQGKKINRVACGSAHTLAWSTSKPANAGKLP 4082



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 16/280 (5%)

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A T+   ++ WG ++ +   LG      + +P   +  L  ++V  V+ G      VT  
Sbjct: 2706 AATIRTKVFVWGLNDKD--QLGGLKGSKIKVPS-FSETLSALNVVQVAGGSKSLFAVTVE 2762

Query: 359  GQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+++  G+ T G LG G    +V  PR++ +L      + A    H+        G  + 
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV---HSG-------GRHAM 2812

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
            +    GK+F+WG+GD G+LGH  +     P  + AL       ++CG S + A+T++G +
Sbjct: 2813 ALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 2872

Query: 478  YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKG 535
            YT G   YG+LG      +L  ++   L  + V ++ACG  D     LT    V++WG G
Sbjct: 2873 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2932

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              G+LG G ++  N P  +E L  + V  I CG  F+ A+
Sbjct: 2933 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2972



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 2826 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG--LGEYGRL 2883

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 2884 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2934

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 2935 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 2992

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             ++ +  P+ + G L G  +  V+ G  H   VT  GQ++ +GD   G  G+G       
Sbjct: 2993 TDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3051

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3052 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3085



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 91/165 (55%), Gaps = 9/165 (5%)

Query: 424  KLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
            K+F WG  D+ +LG G K +++ VP+    L   N  QV+ G     A+T  G VY  G 
Sbjct: 2712 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2770

Query: 483  PVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGR 539
               G+LG   ++G +P  R    L+   V+++A   G  H   LT   ++++WG+G +G+
Sbjct: 2771 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 2830

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
            LGH    + + P L+EALK K+++ I CG+S +AAI     L+ W
Sbjct: 2831 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 2875



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 117/253 (46%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR ++   G     AV          
Sbjct: 3705 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVT--------- 3755

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3756 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3812

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V +IA G  H A +T+  ++YTWGKG
Sbjct: 3813 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKG 3872

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGHGD++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 3873 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3932

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 3933 RGGSDGCKVPMKI 3945



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2746 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 2805

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G    +ALT  G +++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 2806 SGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 2864

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 2865 AITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 2924

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 2925 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 2953



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 21/116 (18%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG- 310
           G+V+SWG+   G+LG G       PKLI+ L++++V  V CG   + A+T  G +Y+WG 
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNG-----------------PLEGIHVSSVSCGP 349
           G N     LGHG E  +  PK L G                  L+  H+  ++CGP
Sbjct: 469 GDNQR---LGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIACGP 521



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 27/141 (19%)

Query: 475 GHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           G V++ G   YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WG
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWG 467

Query: 534 KGANGRLGHGDTDDRNFPSLVEALK------------------DKQVKSIVCGTSFTAAI 575
           KG N RLGHG  +   +P L+E L+                   K +  I CG + + A 
Sbjct: 468 KGDNQRLGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIACGPAQSFA- 526

Query: 576 CLHKWVSGVDQSMCSGCRIPF 596
               W S  + S+  G R+PF
Sbjct: 527 ----WSSCSEWSI--GLRVPF 541



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 49/225 (21%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ +  +AC E     ++ +G +Y    +
Sbjct: 339 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYN 393

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
           +    L+G     SL                               GQ++++GDG +G L
Sbjct: 394 SDT--LVGVVAVFSLIF-----------------------------GQVWSWGDGDYGKL 422

Query: 373 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           G G      TP+ ++ L+ L  V+  CG   + A+ +             G++++WG GD
Sbjct: 423 GRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK------------DGQVYSWGKGD 470

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
             RLGHG +E    P  +  L +    Q +C          T H+
Sbjct: 471 NQRLGHGTEEHVRYPKLLEGL-QATLPQANCLSKKXXXXLDTKHI 514



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 10/95 (10%)

Query: 189 LGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G V+ WG+  GD    G + R GS  G K     PK +E    LDV  + CG + +  +
Sbjct: 408 FGQVWSWGD--GDY---GKLGRGGS-DGCK----TPKLIEKLQDLDVVKVRCGSQFSVAL 457

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           TK G+V+SWG+    RLGHG +  V +PKL++ L+
Sbjct: 458 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 492


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
          Length = 4860

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 201/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3997 DVYLWGA-----------GRHGQLAEAGRNVMVPVAAPS--FSQAQQVVCGQNCTFVIQA 4043

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVT+ G+LFTFG+G
Sbjct: 4104 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4160

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV-----------STDGSMVWA 4209

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4269

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P +V   L+  F+E+IA G  H   L+S  +VY WG  + G+LG G T+
Sbjct: 4270 LPEGRARNHNRPQQVP-VLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTN 4328

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+L+  L+ K ++ I  G   +AA
Sbjct: 4329 HVREPTLITVLQGKNIRQISAGRCHSAA 4356



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGVSIQQISAGTSHSLA 732



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 162/330 (49%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V   V+ P    A      + V CG++ T  +  +G +   
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVMVPVAAPSFSQA------QQVVCGQNCTFVIQANGTVLAC 4050

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4051 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             + GKLF
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLF 4155

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + TVA++T G  V+  G   Y
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDY 4215

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4216 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4275

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  V  L    ++ I  G   T A+
Sbjct: 4276 RNHNRPQQVPVLSGVFIEDIAVGAEHTLAL 4305



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 132/276 (47%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4146 AVVTADGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVST 4202

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4203 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 409  -------------------------------EVMVGSSSSSNCSS-GKLFTWGDGDRGRL 436
                                           ++ VG+  +   SS G ++ WG    G+L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4322

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT +  L   N  Q+S G   + A T
Sbjct: 4323 GLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4358



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           + +  +S G  H+   T+
Sbjct: 718 VSIQQISAGTSHSLAWTA 735



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            +++IA G  H   ++  G+V++WG    G+LG G  + V  P LI  L+  N+  ++ G 
Sbjct: 4292 IEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGR 4351

Query: 295  HHTCAVT 301
             H+ A T
Sbjct: 4352 CHSAAWT 4358


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/325 (38%), Positives = 175/325 (53%), Gaps = 18/325 (5%)

Query: 235 VQNIACGGRHAALVTKQG-EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           + ++ CG  H    ++ G EV+SWG    GRLGHG  SD+  P  I AL  I ++ +ACG
Sbjct: 58  IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 117

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           + H  AVT+ G++ +WG  N N G LG G+     +P+K+    EGI +  V+ G  HTA
Sbjct: 118 DSHCLAVTMEGEVQSWG-RNQN-GQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTA 174

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            VT  G L+ +G G +G LG GDR     P  V S  G +    ACG  HT +V      
Sbjct: 175 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV------ 228

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                   SG L+T+G    G+LGHGD E  L+P  + AL      Q+S G   T+ALT+
Sbjct: 229 ------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTS 282

Query: 474 TGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            G +Y  G   +GQ+G      +  P +V     +  V+ ++CG  H   +T R  V+ W
Sbjct: 283 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAW 341

Query: 533 GKGANGRLGHGDTDDRNFPSLVEAL 557
           G+G NG+LG G++ DRNFP ++EAL
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIEAL 366



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 179/369 (48%), Gaps = 22/369 (5%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H+  +     V SWG    G+LGHG   D   P  + AL    +  V CG  HT
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 68

Query: 298 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + SG ++Y+WG  +  FG LGHGN   L+ P  +   L GI +  ++CG  H   VT
Sbjct: 69  VAYSQSGMEVYSWGWGD--FGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 125

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG GD      P+++ + +G+R    A G  HTAAV E       
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 178

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 G L+ WG G  G LG GD+  RLVP  V +        V+CG   T++++ +G 
Sbjct: 179 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +YT G   YGQLG       L P ++E  L+ +F+ +I+ G  H   LTS  ++Y WG  
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGWN 292

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 591
             G++G G+  D+  P  V    D++V  + CG   T A+     +  W  G +  +  G
Sbjct: 293 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 352

Query: 592 CRIPFNFKR 600
             +  NF +
Sbjct: 353 ESVDRNFPK 361



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 173/381 (45%), Gaps = 49/381 (12%)

Query: 127 AAPPKVLLPSESACGSVNSLSSG-------GSDGRTGH-----------LKGLSGDTFRV 168
           A P KVL+ S  A  SV  LS         G DG+ GH           L  L G    V
Sbjct: 1   APPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQI-V 59

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
           S++     +   S      S  +V+ WG         G   R G   G   D F P  ++
Sbjct: 60  SVTCGADHTVAYS-----QSGMEVYSWGW--------GDFGRLGH--GNSSDLFTPLPIK 104

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           +   + ++ IACG  H   VT +GEV SWG    G+LG G   D   P+ I A + I ++
Sbjct: 105 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK 164

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
           +VA G  HT AVT  GD+Y WG     +G LG G+     +P+++     G  +S V+CG
Sbjct: 165 MVAAGAEHTAAVTEDGDLYGWGWG--RYGNLGLGDRTDRLVPERVT-STGGEKMSMVACG 221

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             HT  V+ +G L+T+G   +G LGHGD      P ++++L      + + G  HT A+ 
Sbjct: 222 WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALT 281

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                       S GKL+ WG    G++G G+   +  P  V    +    QVSCG   T
Sbjct: 282 ------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 329

Query: 469 VALTTTGHVYTMGSPVYGQLG 489
           +A+T   +V+  G    GQLG
Sbjct: 330 LAVTERNNVFAWGRGTNGQLG 350


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
            gallopavo]
          Length = 4334

 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/388 (35%), Positives = 203/388 (52%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3471 DVYLWGA-----------GRHGQLAEAGRNVMVPVAAPS--FSQAQQVVCGQNCTFVIQA 3517

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 3518 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3577

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVT+ G+LFTFG+G
Sbjct: 3578 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 3634

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV   M GS          ++ 
Sbjct: 3635 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV--SMDGS---------MVWA 3683

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 3684 FGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 3743

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P +V   L+  F+E+IA G  H   L+S  +VY WG  + G+LG G T+
Sbjct: 3744 LPEGRARNHNRPQQVP-VLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTN 3802

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+L+  L+ K ++ I  G   +AA
Sbjct: 3803 HVREPTLITVLQGKNIRQISAGRCHSAA 3830



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGVSIQQISAGTSHSLA 732



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 161/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V   V+ P    A      + V CG++ T  +  +G +   
Sbjct: 3471 DVYLWGAGRHGQLAEAGRNVMVPVAAPSFSQA------QQVVCGQNCTFVIQANGTVLAC 3524

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 3525 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3581

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             + GKLF
Sbjct: 3582 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLF 3629

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + TVA++  G  V+  G   Y
Sbjct: 3630 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDY 3689

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 3690 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 3749

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  V  L    ++ I  G   T A+
Sbjct: 3750 RNHNRPQQVPVLSGVFIEDIAVGAEHTLAL 3779



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 162/344 (47%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 3523 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 3573

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 3574 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 3622

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV++ G M  
Sbjct: 3623 TADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSM-V 3681

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 3682 WAFGDGDYGKLGLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 3740

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P++V  L G+     A G  HT A+             S+G ++ W
Sbjct: 3741 LIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLAL------------SSTGDVYAW 3788

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT +  L   N  Q+S G   + A T
Sbjct: 3789 GSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 3832



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 90/162 (55%), Gaps = 7/162 (4%)

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV--SCG---HSLTVALTTTG 475
            ++G +   G+G  GRLG G+ +   V T ++AL      Q+  SCG   HS+  ALT +G
Sbjct: 3517 ANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM--ALTESG 3574

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             V++ G   YG+LG   ++ +   R    L    V +++CG  H AV+T+  +++T+G G
Sbjct: 3575 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 3634

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
              GRLG G+T ++  P  V AL+  Q+  + CG + T A+ +
Sbjct: 3635 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSM 3676



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           + +  +S G  H+   T+
Sbjct: 718 VSIQQISAGTSHSLAWTA 735


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 200/390 (51%), Gaps = 29/390 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            V++WG    D +        G   G K+   +P   E    L   +IA G +   +V+++
Sbjct: 3261 VYVWGLNDKDQL--------GGLKGSKIK--LPVYSEVLSKLKPIHIAGGSKTLFVVSQE 3310

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ GE   GRLG G DS+V  PKLI  L    ++ +A   G  H  A+T  G +++W
Sbjct: 3311 GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSW 3370

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN +SL  P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3371 GEGED---GKLGHGNSVSLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGE 3426

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V SL G R ++ ACG             + + +  + G +++W
Sbjct: 3427 YGRLGHGDTATQMKPKLVQSLVGQRVIQVACG----------SRDAQTMALTADGSVYSW 3476

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +    P  +  L      Q+ CG   ++ALT  G V+T G   Y +L
Sbjct: 3477 GDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRL 3536

Query: 489  GDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G    +  + PT VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3537 GHGNDHHVRKPTLVEGLRGKKVV-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIV 3595

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
               PSLV  L D +V  + CG+S + A  L
Sbjct: 3596 NKKPSLVHELDDARVNRVSCGSSHSIAWVL 3625



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 191/392 (48%), Gaps = 29/392 (7%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            D  G ++ WG     G LGG         G K+   +P   ES   L    +  G +   
Sbjct: 4289 DGSGAIYGWGH-NHRGQLGG-------LEGAKVK--LPVLCESLSALRPVQLTGGEQTLL 4338

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSG 304
             VT  G+V++ G    GRLG G    V  P L+++++++ V+ VA   G  H  A++  G
Sbjct: 4339 AVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4398

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
             +Y+WG  +   G LGHGN +    PK +   L G  +  ++CG  H+A +TSAG L+T+
Sbjct: 4399 HVYSWGEGD--DGKLGHGNRLMYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYTW 4455

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG- 423
            G G +G LGHGD     TP+ V++L+  + +  ACG               + + C +  
Sbjct: 4456 GKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG------------SGDAQTLCVTDD 4503

Query: 424  -KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
              +++WGDGD G+LG G  +   +P  + +L      +V CG   +VALT +G +YT G 
Sbjct: 4504 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGK 4563

Query: 483  PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
              Y +LG    +     R    L    +  IA G  H    T + EV+TWG    G+LG 
Sbjct: 4564 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGD 4623

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G T     P LV AL+ K++  + CG++ T A
Sbjct: 4624 GTTSALQRPRLVHALQGKKITRVACGSAHTLA 4655



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/288 (34%), Positives = 150/288 (52%), Gaps = 27/288 (9%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G V+ WGE   DG LG          G ++    PK +E  +  ++ +IACGG H+A 
Sbjct: 4396 SEGHVYSWGE-GDDGKLG---------HGNRLMYDRPKLIEELLGTEIVDIACGGHHSAA 4445

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGD 305
            +T  G +++WG+   GRLGHG   D   PKL++AL++  V  VAC  G+  T  VT   +
Sbjct: 4446 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN 4505

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +++WG  + ++G LG G      +P K+   L G+ V  V CG   +  +T +G ++T+G
Sbjct: 4506 VWSWG--DGDYGKLGRGGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWG 4562

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
             G +  LGHG    V  PR+V +L+G + +  A G  H  A  +             G++
Sbjct: 4563 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTD------------KGEV 4610

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            FTWGD D G+LG G   A   P  V AL      +V+CG + T+A +T
Sbjct: 4611 FTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWST 4658



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 159/312 (50%), Gaps = 29/312 (9%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P   DA+  + ++ + C E     +++SG++Y          ++ +G+E     P+++ G
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVY----------MMYYGSETQY--PQRVYG 499

Query: 336 PLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 393
             E     ++S S G  H   +T    ++++G+G  G LGHGDR+    P+ V++L    
Sbjct: 500 FSEKPVTMIASHSDGT-HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKN 558

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
               ACG  ++A +             S+G+L+TWG G+ GRLGHG+ +  L+PT V AL
Sbjct: 559 ITFIACGSTYSAVL------------SSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTAL 606

Query: 454 VEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE 511
                  V+CG   S T+ +T +G V++ G   YG+LG    +G    ++  KL    V 
Sbjct: 607 NGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 666

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
           ++ CG    A LT+  EVYTWGKG   RLGHG+ +   +P ++E L  K+VK +  G   
Sbjct: 667 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFH 726

Query: 572 TAAICLHKWVSG 583
             A+   + V G
Sbjct: 727 VLALTEDQLVYG 738



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 135/259 (52%), Gaps = 18/259 (6%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G H   +T+   V+SWG   GGRLGHG       PKL++AL + N+  +ACG  ++  ++
Sbjct: 514 GTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS 573

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAG 359
            +G++YTWG    N+G LGHGN  ++ +P  L   L G  V  V+CG     T  VT++G
Sbjct: 574 SNGELYTWGRG--NYGRLGHGNSDNVLIP-TLVTALNGHMVVHVACGSGDSQTLCVTASG 630

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            +F++GDG +G LG G      TP+ VD L  +   +  CG            G  S++ 
Sbjct: 631 IVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCG------------GQFSAAL 678

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
            + G+++TWG G+  RLGHG++E    P  +  L      ++  G+   +ALT    VY 
Sbjct: 679 TAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYG 738

Query: 480 MGSPVYGQLGDPKANGKLP 498
            G   YGQ+ DP     +P
Sbjct: 739 WGRNDYGQI-DPALGTVVP 756



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 146/287 (50%), Gaps = 27/287 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G +F WGE   DG LG G         V +D   P+ +ES     +++IACG  H+A +T
Sbjct: 3365 GKIFSWGEGE-DGKLGHG-------NSVSLDK--PRLIESLKSKRIRDIACGSGHSAAIT 3414

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+++WG    GRLGHG  +    PKL+ +L    V  VACG  +  T A+T  G +Y
Sbjct: 3415 SSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY 3474

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G     + P  ++  L G+ V  + CG   +  +T  G+++T+G G
Sbjct: 3475 SWG--DGDFGKLGRGGSDGCYTPLLIDR-LNGLGVVQIECGAQFSLALTKYGEVWTWGKG 3531

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG+   V  P  V+ L+G + V  A G  H  AV +            +G+++ 
Sbjct: 3532 DYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTD------------TGQVYA 3579

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            WGD D G+ G+G       P+ V  L +    +VSCG S ++A   T
Sbjct: 3580 WGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3626



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 174/362 (48%), Gaps = 31/362 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P   ++   L ++ + C  R   +++  G V+         + +G  S+  +P+ +    
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVY--------MMYYG--SETQYPQRVYGFS 501

Query: 284 NINVELVACGEH--HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
              V ++A      H  A+T    +Y+WG  N + G LGHG+ +    PK +   ++  +
Sbjct: 502 EKPVTMIASHSDGTHYLALTQDSSVYSWG--NGDGGRLGHGDRVWYDEPKLVEALVDK-N 558

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ ++CG  ++AV++S G+L+T+G G +G LGHG+  +V  P  V +L G   V  ACG 
Sbjct: 559 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACG- 617

Query: 402 WHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
                         S + C  +SG +F+WGDG+ G+LG G  +    P  V  L++ N  
Sbjct: 618 -----------SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 666

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDY 518
           +V CG   + ALT  G VYT G     +LG   + + + P  +E   TK  V+E+  G++
Sbjct: 667 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKK-VKELCVGNF 725

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
           HV  LT    VY WG+   G++          P+L   L  K +  + CG + + A C  
Sbjct: 726 HVLALTEDQLVYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNIIGLACGLTQSFAWCTS 785

Query: 579 KW 580
            W
Sbjct: 786 AW 787



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 146/306 (47%), Gaps = 27/306 (8%)

Query: 172 SAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAV 231
           + ++S S G+ +        V+ WG   GDG       R G    V  D   PK VE+ V
Sbjct: 506 TMIASHSDGTHYLALTQDSSVYSWG--NGDG------GRLGHGDRVWYDE--PKLVEALV 555

Query: 232 VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA 291
             ++  IACG  ++A+++  GE+++WG    GRLGHG   +V  P L+ AL    V  VA
Sbjct: 556 DKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVA 615

Query: 292 C--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           C  G+  T  VT SG +++WG  + N+G LG G       PK ++  L+ I+V+ V CG 
Sbjct: 616 CGSGDSQTLCVTASGIVFSWG--DGNYGKLGRGGCDGSKTPKIVDKLLD-INVAKVYCGG 672

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             +A +T+ G+++T+G G    LGHG+   +  P+ ++ L   +      G +H  A+ E
Sbjct: 673 QFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTE 732

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
             +            ++ WG  D G++          PT    L   N   ++CG + + 
Sbjct: 733 DQL------------VYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNIIGLACGLTQSF 780

Query: 470 ALTTTG 475
           A  T+ 
Sbjct: 781 AWCTSA 786



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 125/255 (49%), Gaps = 26/255 (10%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   +SL  LR V+   G     AV          
Sbjct: 4291 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVT--------- 4341

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GK++  G G  GRLG G  ++ +VPT + ++  V      V+ G    +AL++ G
Sbjct: 4342 ---ADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4398

Query: 476  HVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            HVY+ G    G+LG   +     P  +E  L    V+ IACG +H A +TS   +YTWGK
Sbjct: 4399 HVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWGK 4457

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG------V 584
            G  GRLGHGD++D+  P LVEAL+D +V  + CG+     +C+    + W  G      +
Sbjct: 4458 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4517

Query: 585  DQSMCSGCRIPFNFK 599
             +    GC+IP   +
Sbjct: 4518 GRGGSDGCKIPMKIE 4532



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 23/289 (7%)

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            SG +Y WG ++   G LG      + LP  L   L  +    ++ G      VT+ G+++
Sbjct: 4291 SGAIYGWGHNH--RGQLGGLEGAKVKLPV-LCESLSALRPVQLTGGEQTLLAVTADGKVY 4347

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC--GVWHTAAVVEVMVGSSSSSNC 420
              G G  G LG G   SV  P  ++S++ +   + A   G  H  A+             
Sbjct: 4348 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLAL------------S 4395

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            S G +++WG+GD G+LGHG++     P  +  L+      ++CG   + A+T+ G +YT 
Sbjct: 4396 SEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTW 4455

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANG 538
            G   YG+LG   +  +L  ++   L    V ++ACG  D     +T    V++WG G  G
Sbjct: 4456 GKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4515

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 583
            +LG G +D    P  +E+L    V  + CG+ F+ A+     ++ W  G
Sbjct: 4516 KLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4564



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 16/192 (8%)

Query: 423  GKLFTWGDGDRGRLGHGDK----EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
            GKL+  G+G  GRLG GD     E +L+P     +++         H+L  ALT  G ++
Sbjct: 3311 GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHAL--ALTQDGKIF 3368

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
            + G    G+LG   +      R+   L    + +IACG  H A +TS  E+YTWG G  G
Sbjct: 3369 SWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYG 3428

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGT------SFTAAICLHKWVSG----VDQSM 588
            RLGHGDT  +  P LV++L  ++V  + CG+      + TA   ++ W  G    + +  
Sbjct: 3429 RLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3488

Query: 589  CSGCRIPFNFKR 600
              GC  P    R
Sbjct: 3489 SDGCYTPLLIDR 3500



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 30/190 (15%)

Query: 139 ACGSVNS--LSSGG--------SDGRTGHLKGLSGDTFRVSLSSAVSSSSQ---GSGHDD 185
           ACGS  S  LSS G        + GR GH  G S +    +L +A++         G  D
Sbjct: 563 ACGSTYSAVLSSNGELYTWGRGNYGRLGH--GNSDNVLIPTLVTALNGHMVVHVACGSGD 620

Query: 186 GDSL-----GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
             +L     G VF WG+     +  GG   S +          PK V+  + ++V  + C
Sbjct: 621 SQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKT----------PKIVDKLLDINVAKVYC 670

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           GG+ +A +T  GEV++WG+  G RLGHG +  + +PK+I+ L    V+ +  G  H  A+
Sbjct: 671 GGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLAL 730

Query: 301 TLSGDMYTWG 310
           T    +Y WG
Sbjct: 731 TEDQLVYGWG 740



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 60/147 (40%), Gaps = 15/147 (10%)

Query: 477  VYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VY  G     QLG  K +  KLP   E  L+K     IA G   + V++   ++Y  G+G
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSE-VLSKLKPIHIAGGSKTLFVVSQEGKLYACGEG 3319

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSGVDQSMC 589
             NGRLG GD  +   P L+  L    +K +   +    A+ L +      W  G D  + 
Sbjct: 3320 TNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLG 3379

Query: 590  SGCRIPFN-------FKRKRHNCYNCG 609
             G  +  +        K KR     CG
Sbjct: 3380 HGNSVSLDKPRLIESLKSKRIRDIACG 3406


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2941 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2990

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 2991 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3050

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3051 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3107

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3108 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3157

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3158 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3217

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3218 GHGTDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3276

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3277 NRKPTLVQGLEGQKITRVACGSSHSVA 3303



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 191/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3935 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3994

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3995 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4052

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  ++ G  H+A +T+AG LFT+G G +G LGHGD   
Sbjct: 4053 GHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4111

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4112 QLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4159

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4160 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4219

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4220 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4278

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 4279 LQGKKINRVACGSAHTLA 4296



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2991 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSNYVVKKVAVHSGGRHAMA 3041

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G++FSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3042 LTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3101

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3102 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3158

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3159 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3206

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T TG VY  G   +
Sbjct: 3207 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3266

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3267 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3306



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/326 (33%), Positives = 162/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V +IA GG H+A 
Sbjct: 4037 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDIAAGGAHSAC 4086

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G++F+WG+   GRLGHG   D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4087 ITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT 4146

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4147 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4205

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4206 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4253

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4254 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4300

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P   GKLPT+V   +  N ++EI
Sbjct: 4301 --KPANAGKLPTQV--PMEYNHLQEI 4322



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            V+  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2924 VRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2981

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 2982 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRH 3038

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3039 AMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT--- 3095

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3096 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3146

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3147 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3205

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3206 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3252



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 167/339 (49%), Gaps = 40/339 (11%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG      +G    ++VS P   + L ++ V  +AC E     ++ +G +YT    
Sbjct: 401 EVIAWG-----LIGWKYYANVSGPIQCEGLASLGVVQIACAEKRFLILSRNGRVYT---Q 452

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
             N   LG     SL            + +++ S G  H   +++ G++F++G G  G L
Sbjct: 453 AYNSDTLGPQLVQSL-------ASRNIVKIAAHSDGH-HYLALSANGEVFSWGCGDGGRL 504

Query: 373 GHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           GHGD + +  P+ + +L G +     V  ACG  ++AA+             + G+L+TW
Sbjct: 505 GHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELYTW 552

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYG 486
           G G+ GRLGHG  E + +P  V  L       VSCG   + T+A+T  G V++ G   YG
Sbjct: 553 GRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYG 612

Query: 487 QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           +LG   ++G K P  +E KL    + ++ CG      LT   +VYTWGKG N RLGHG  
Sbjct: 613 KLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 671

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
           +   +P L+E LK K+V  +  G++   A+     +H W
Sbjct: 672 EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 710



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 179/395 (45%), Gaps = 34/395 (8%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3992

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3993 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4049

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A +             ++G LFTWG
Sbjct: 4050 GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT------------AAGDLFTWG 4097

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGHGD E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4098 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4157

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4158 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4216

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAIC-----LHKWVSGVDQSMCSGC-------RI 594
                P  V+ L+ K+V +I  G S     C     ++ W    +  +  G        R+
Sbjct: 4217 HVRRPRQVQGLQGKKVIAIATG-SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 4275

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPN 629
                + K+ N   CG  +    S+ K   A   P 
Sbjct: 4276 VAALQGKKINRVACGSAHTLAWSTSKPANAGKLPT 4310



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 152/329 (46%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGDSL------GDVFIWGECTGDGI 203
           +GR  + +  + DT    L  +++S +  + + H DG         G+VF WG C   G 
Sbjct: 446 NGRV-YTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWG-CGDGGR 503

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG      G    ++    +           V +IACG  ++A +T +GE+++WG    G
Sbjct: 504 LG-----HGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYG 558

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  V+C  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 559 RLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 616

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + +  V CG   +  +T  GQ++T+G G    LGHG    V 
Sbjct: 617 GGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR 675

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ LKG + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 676 YPKLLEGLKGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 723

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 724 ITKPEPAALPGLDTKHIVGIACGPAQSFA 752



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3054 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG--LGEYGRL 3111

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3112 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3162

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3163 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3220

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             ++ +  P+ + G L G  +  V+ G  H   VT  GQ++ +GD   G  G+G       
Sbjct: 3221 TDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3279

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3280 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3313



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 9/186 (4%)

Query: 403  HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQV 461
            +T ++V        S+     K+F WG  D+ +LG G K +++ VP+    L   N  QV
Sbjct: 2919 NTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQV 2977

Query: 462  SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIAC--GDY 518
            + G     A+T  G VY  G    G+LG   ++G +P  R    L+   V+++A   G  
Sbjct: 2978 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3037

Query: 519  HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC-- 576
            H   LT   ++++WG+G +G+LGH    + + P L+EALK K+++ I CG+S +AAI   
Sbjct: 3038 HAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3097

Query: 577  --LHKW 580
              L+ W
Sbjct: 3098 GELYTW 3103



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2974 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3033

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G    +ALT  G +++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3034 SGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3092

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3093 AITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3152

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3153 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3181



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 117/253 (46%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3932 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3982

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3983 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4039

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V +IA G  H A +T+  +++TWGKG
Sbjct: 4040 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4099

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGHGD++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4100 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4159

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4160 RGGSDGCKVPMKI 4172



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 105/212 (49%), Gaps = 31/212 (14%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSA-----VSSSSQGSGHDDGDSL-----GDVFIWGECT 199
           G+ GR GH  G S D     L +      V   S GSG  D  +L     G V+ WG+  
Sbjct: 555 GNYGRLGH--GSSEDQTIPMLVTGLKGLKVIDVSCGSG--DAQTLAVTENGQVWSWGD-- 608

Query: 200 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
           GD    G + R GS  G K     PK +E    LD+  + CG + +  +TK G+V++WG+
Sbjct: 609 GDY---GKLGRGGS-DGCK----TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGK 660

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN-CNFGL 318
               RLGHG +  V +PKL++ LK   V  VA G  H  A+T   ++++WG ++ C    
Sbjct: 661 GDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ--- 717

Query: 319 LGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 349
             H + + +  P+    P L+  H+  ++CGP
Sbjct: 718 --HFDTLRITKPEPAALPGLDTKHIVGIACGP 747


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2965 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3075 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3181

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3241

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3300

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3301 NRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/379 (33%), Positives = 190/379 (50%), Gaps = 23/379 (6%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4076

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A +T+AG LFT+G G +G LGHGD   
Sbjct: 4077 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4135

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4136 QLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS-PVYGQLGDPKANG- 495
             G  +   VP  + +L      +V CG   +VALT +G VYT      Y +LG    +  
Sbjct: 4184 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHV 4243

Query: 496  KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
            + P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV 
Sbjct: 4244 RRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4302

Query: 556  ALKDKQVKSIVCGTSFTAA 574
            AL+ K++  + CG++ T A
Sbjct: 4303 ALQGKKINRVACGSAHTLA 4321



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3015 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSNYVVKKVAVHSGGRHAMA 3065

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3066 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3125

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3126 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3182

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3183 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3230

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T TG VY  G   +
Sbjct: 3231 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3290

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3291 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            V+  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2948 VRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3005

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3006 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRH 3062

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT--- 3119

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3120 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3229

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 161/329 (48%), Gaps = 45/329 (13%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4061 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4110

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G++F+WG+   GRLGHG   D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4111 ITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT 4170

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT---F 364
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T   F
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWQVF 4229

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
             D  +  LGHG    V  PR+V  L+G + +  A G  H     E             G+
Sbjct: 4230 RD--YHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGE 4275

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            ++TWGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+          
Sbjct: 4276 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS---------- 4325

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
                  P   GKLPT+V   +  N ++EI
Sbjct: 4326 -----KPANAGKLPTQV--PMEYNHLQEI 4347



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 167/339 (49%), Gaps = 40/339 (11%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG      +G    ++VS P   + L N+ V  VAC E     ++ +G +YT    
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVVQVACAEKRFLILSRNGRVYT---Q 476

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
             N   LG     SL            + +++ S G  H   +++ G++F++G G  G L
Sbjct: 477 AYNSDTLGPQLVQSL-------ASRNIVKIAAHSDGH-HYLALSANGEVFSWGCGDGGRL 528

Query: 373 GHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           GHGD + +  P+ + +L G +     V  ACG  ++AA+             + G+L+TW
Sbjct: 529 GHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELYTW 576

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYG 486
           G G+ GRLGHG  E + +P  V  L       VSCG   + T+A+T  G V++ G   YG
Sbjct: 577 GRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYG 636

Query: 487 QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           +LG   ++G K P  +E KL    + ++ CG      LT   +VYTWGKG N RLGHG  
Sbjct: 637 KLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
           +   +P L+E LK K+V  +  G++   A+     +H W
Sbjct: 696 EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 152/329 (46%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGDSL------GDVFIWGECTGDGI 203
           +GR  + +  + DT    L  +++S +  + + H DG         G+VF WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG      G    ++    +           V +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LG-----HGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  V+C  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + +  V CG   +  +T  GQ++T+G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ LKG + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLKGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 748 VTKPEPAALPGLDTKHIVGIACGPAQSFA 776



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 21/272 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG--LGEYGRL 3135

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3136 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3244

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             ++ +  P+ + G L G  +  V+ G  H   VT  GQ++ +GD   G  G+G       
Sbjct: 3245 TDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3303

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
            P  V  L+G +  R ACG  H+ A   V V +
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVAWTTVDVAT 3335



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 9/186 (4%)

Query: 403  HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQV 461
            +T ++V        S+     K+F WG  D+ +LG G K +++ VP+    L   N  QV
Sbjct: 2943 NTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQV 3001

Query: 462  SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIAC--GDY 518
            + G     A+T  G VY  G    G+LG   ++G +P  R    L+   V+++A   G  
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3061

Query: 519  HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC-- 576
            H   LT   +V++WG+G +G+LGH    + + P L+EALK K+++ I CG+S +AAI   
Sbjct: 3062 HAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121

Query: 577  --LHKW 580
              L+ W
Sbjct: 3122 GELYTW 3127



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 303  SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            SG +Y WG ++   G LG   G ++ +  P +    L  + +     G      VT+ G+
Sbjct: 3956 SGTIYGWGHNH--RGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4010

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGSSSSS 418
            L+  G G  G LG G   SVSTP  ++S++   ++ V    G  H  A+           
Sbjct: 4011 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL----------- 4059

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
              S G++++WG+ + G+LGHG++     P  + +L       V+ G + +  +T  G ++
Sbjct: 4060 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLF 4118

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 536
            T G   YG+LG   +  +L  ++   L    V +IACG  D     LT    V++WG G 
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G+LG G +D    P  +++L    V  + CG+ F+ A+
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4217



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3057

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G    +ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3058 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3116

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3117 AITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3176

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3177 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3205



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 117/253 (46%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4006

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4007 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  +++TWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKG 4123

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGHGD++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4184 RGGSDGCKVPMKI 4196



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 105/212 (49%), Gaps = 31/212 (14%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSA-----VSSSSQGSGHDDGDSL-----GDVFIWGECT 199
           G+ GR GH  G S D     L +      V   S GSG  D  +L     G V+ WG+  
Sbjct: 579 GNYGRLGH--GSSEDQTIPMLVTGLKGLKVIDVSCGSG--DAQTLAVTENGQVWSWGD-- 632

Query: 200 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
           GD    G + R GS  G K     PK +E    LD+  + CG + +  +TK G+V++WG+
Sbjct: 633 GDY---GKLGRGGS-DGCK----TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGK 684

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN-CNFGL 318
               RLGHG +  V +PKL++ LK   V  VA G  H  A+T   ++++WG ++ C    
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ--- 741

Query: 319 LGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 349
             H + + +  P+    P L+  H+  ++CGP
Sbjct: 742 --HFDTLRVTKPEPAALPGLDTKHIVGIACGP 771


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 186/340 (54%), Gaps = 19/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D  +P  + +     + ++ CG  H  A    + EV+SWG    GRLGHG  SD+  P+ 
Sbjct: 54  DRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQP 113

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL+ + ++ +ACG+ H  AVT+ G++ +WG  N N G LG G      +P+K+    +
Sbjct: 114 IRALQGLRIKQIACGDSHCLAVTMEGEVQSWG-RNQN-GQLGLGTTEDSLVPQKIQ-TFQ 170

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ +  V+ G  H+  +T  G+L+ +G G +G LG GDR     P +V S+   + V  A
Sbjct: 171 GVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKV-SVDCDKMVLVA 229

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT +V             SSG+L+T+G    G+LGHGD +  LVP  + A  +   
Sbjct: 230 CGWRHTISV------------SSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLI 277

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
           CQVS G   T+ALTT G +Y  G   +GQ+G     +   P +V+    +  V +I+CG 
Sbjct: 278 CQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQK-VAQISCGW 336

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   +T +  VY+WG+G NG+LG GDT D N+P ++EAL
Sbjct: 337 RHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPKIIEAL 376



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 178/368 (48%), Gaps = 21/368 (5%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ GG H+  +     V SWG    G+LGHG   D   P  + AL    +  V CG  HT
Sbjct: 20  ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHT 79

Query: 298 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + S  ++Y+WG  +  FG LGHGN   L++P+ +   L+G+ +  ++CG  H   VT
Sbjct: 80  LAYSESKVEVYSWGWGD--FGRLGHGNSSDLFIPQPIRA-LQGLRIKQIACGDSHCLAVT 136

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG G       P+++ + +G+     A G  H+ A+ E       
Sbjct: 137 MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 189

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                +G+L+ WG G  G LG GD+  R +P  V+   +     V+CG   T++++++G 
Sbjct: 190 -----NGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCD-KMVLVACGWRHTISVSSSGE 243

Query: 477 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           +YT G   YGQLG       L        +   + +++ G  H   LT+  ++Y WG   
Sbjct: 244 LYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNK 303

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSGC 592
            G++G GD  DR  P  V+   D++V  I CG   T A+     ++ W  G +  +  G 
Sbjct: 304 FGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGD 363

Query: 593 RIPFNFKR 600
            I +N+ +
Sbjct: 364 TIDWNYPK 371



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 180/383 (46%), Gaps = 51/383 (13%)

Query: 127 AAPP---KVLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRVSLSSAVSS 176
           A+PP   +VLL S     SV  +S         G DG+ GH     GDT    L + +S+
Sbjct: 9   ASPPPPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGH-----GDTDDRLLPTQLSA 63

Query: 177 SSQ--------GSGHDDG--DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKA 226
                      G+ H     +S  +V+ WG         G   R G   G   D F+P+ 
Sbjct: 64  LDAQQIVSVVCGADHTLAYSESKVEVYSWGW--------GDFGRLGH--GNSSDLFIPQP 113

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
           + +   L ++ IACG  H   VT +GEV SWG    G+LG G   D   P+ I   + + 
Sbjct: 114 IRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVP 173

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           +++VA G  H+ A+T +G++Y WG     +G LG G+     +P+K++   + + +  V+
Sbjct: 174 IKMVAAGAEHSVAITENGELYGWGWG--RYGNLGLGDRNDRCIPEKVSVDCDKMVL--VA 229

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
           CG  HT  V+S+G+L+T+G   +G LGHGD      P ++ +       + + G  HT A
Sbjct: 230 CGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMA 289

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
           +             + G+L+ WG    G++G GD   R  P  V    +    Q+SCG  
Sbjct: 290 LT------------TGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWR 337

Query: 467 LTVALTTTGHVYTMGSPVYGQLG 489
            T+A+T   +VY+ G    GQLG
Sbjct: 338 HTIAVTEKDNVYSWGRGTNGQLG 360



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 123/244 (50%), Gaps = 16/244 (6%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   DS VP+ +++   + ++ +A G  H+  +T+ GE++ WG    G LG G  +D   
Sbjct: 155 GTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCI 214

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P+ + ++    + LVACG  HT +V+ SG++YT+G S   +G LGHG+     +P KL  
Sbjct: 215 PEKV-SVDCDKMVLVACGWRHTISVSSSGELYTYGWSK--YGQLGHGDCKDHLVPHKLQA 271

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
             + + +  VS G  HT  +T+ GQL+ +G   FG +G GD +   +P +V      +  
Sbjct: 272 FSDKL-ICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVA 330

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
           + +CG  HT AV E               +++WG G  G+LG GD      P  + AL  
Sbjct: 331 QISCGWRHTIAVTE------------KDNVYSWGRGTNGQLGIGDTIDWNYPKIIEALSV 378

Query: 456 PNFC 459
              C
Sbjct: 379 DGSC 382



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)

Query: 199 TGDGILGGGIHRSGSY-AGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 257
           TG  + G G ++ G    G  +D   P  V+      V  I+CG RH   VT++  V+SW
Sbjct: 292 TGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSW 351

Query: 258 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
           G    G+LG G   D ++PK+I+AL        +CG+H
Sbjct: 352 GRGTNGQLGIGDTIDWNYPKIIEALSVDG----SCGQH 385


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2965 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3075 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3181

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3241

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3300

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3301 NRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 191/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWG--EAEDGKL 4076

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  ++ G  H+A +T+AG LFT+G G +G LGHGD   
Sbjct: 4077 GHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4135

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4136 QLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4184 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4243

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4244 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4302

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 4303 LQGKKINRVACGSAHTLA 4320



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3015 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSNYVVKKVAVHSGGRHAMA 3065

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3066 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3125

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG--PWHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3126 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3182

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3183 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3230

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T TG VY  G   +
Sbjct: 3231 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3290

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3291 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 161/324 (49%), Gaps = 40/324 (12%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG G +RS            P+ +ES   ++V +IA GG H+A +T
Sbjct: 4063 GEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDIAAGGAHSACIT 4112

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G++F+WG+   GRLGHG   D   PKL++AL+   V  +ACG      + L+ D   W
Sbjct: 4113 AAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVW 4172

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
               + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G +
Sbjct: 4173 SWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4231

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
              LGHG    V  PR+V  L+G + +  A G  H     E             G+++TWG
Sbjct: 4232 HRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYTWG 4279

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            D D G+LG G   A   P  VAAL      +V+CG + T+A +T+               
Sbjct: 4280 DNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS--------------- 4324

Query: 490  DPKANGKLPTRVEGKLTKNFVEEI 513
             P   GKLPT+V   +  N ++EI
Sbjct: 4325 KPANAGKLPTQV--PMEYNHLQEI 4346



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            V+  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2948 VRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3005

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3006 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRH 3062

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT--- 3119

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3120 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3229

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 167/339 (49%), Gaps = 40/339 (11%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG      +G    ++VS P   + L N+ V  VAC E     ++ +G +YT    
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVMQVACAEKRFLILSRNGRVYT---Q 476

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
             N   LG     SL            + +++ S G  H   +++ G++F++G G  G L
Sbjct: 477 AYNSDTLGPQLVQSL-------ASRNIVKIAAHSDGH-HYLALSANGEVFSWGCGDGGRL 528

Query: 373 GHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           GHGD + +  P+ + +L G +     V  ACG  ++AA+             + G+L+TW
Sbjct: 529 GHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELYTW 576

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYG 486
           G G+ GRLGHG  E + +P  V  L       VSCG   + T+A+T  G V++ G   YG
Sbjct: 577 GRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYG 636

Query: 487 QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           +LG   ++G K P  +E KL    + ++ CG      LT   +VYTWGKG N RLGHG  
Sbjct: 637 KLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
           +   +P L+E LK K+V  +  G++   A+     +H W
Sbjct: 696 EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 34/394 (8%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++  G+++++G+   
Sbjct: 4017 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAED 4073

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A +             ++G LFTWG
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT------------AAGDLFTWG 4121

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGHGD E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4122 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4182 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAIC-----LHKWVSGVDQSMCSGC-------RI 594
                P  V+ L+ K+V +I  G S     C     ++ W    +  +  G        R+
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATG-SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 4299

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAP 628
                + K+ N   CG  +    S+ K   A   P
Sbjct: 4300 VAALQGKKINRVACGSAHTLAWSTSKPANAGKLP 4333



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 152/329 (46%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGDSL------GDVFIWGECTGDGI 203
           +GR  + +  + DT    L  +++S +  + + H DG         G+VF WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG      G    ++    +           V +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LG-----HGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  V+C  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + +  V CG   +  +T  GQ++T+G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ LKG + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLKGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 748 ITKPEPAALPGLDTKHIVGIACGPAQSFA 776



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG--LGEYGRL 3135

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3136 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3244

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             ++ +  P+ + G L G  +  V+ G  H   VT  GQ++ +GD   G  G+G       
Sbjct: 3245 TDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3303

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3337



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 9/186 (4%)

Query: 403  HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQV 461
            +T ++V        S+     K+F WG  D+ +LG G K +++ VP+    L   N  QV
Sbjct: 2943 NTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQV 3001

Query: 462  SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIAC--GDY 518
            + G     A+T  G VY  G    G+LG   ++G +P  R    L+   V+++A   G  
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3061

Query: 519  HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC-- 576
            H   LT   +V++WG+G +G+LGH    + + P L+EALK K+++ I CG+S +AAI   
Sbjct: 3062 HAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121

Query: 577  --LHKW 580
              L+ W
Sbjct: 3122 GELYTW 3127



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3057

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G    +ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3058 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3116

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3117 AITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3176

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3177 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3205



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4006

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL+  G
Sbjct: 4007 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEG 4063

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V +IA G  H A +T+  +++TWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGHGD++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4184 RGGSDGCKVPMKI 4196



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 105/212 (49%), Gaps = 31/212 (14%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSA-----VSSSSQGSGHDDGDSL-----GDVFIWGECT 199
           G+ GR GH  G S D     L +      V   S GSG  D  +L     G V+ WG+  
Sbjct: 579 GNYGRLGH--GSSEDQTIPMLVTGLKGLKVIDVSCGSG--DAQTLAVTENGQVWSWGD-- 632

Query: 200 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
           GD    G + R GS  G K     PK +E    LD+  + CG + +  +TK G+V++WG+
Sbjct: 633 GDY---GKLGRGGS-DGCK----TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGK 684

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN-CNFGL 318
               RLGHG +  V +PKL++ LK   V  VA G  H  A+T   ++++WG ++ C    
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ--- 741

Query: 319 LGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 349
             H + + +  P+    P L+  H+  ++CGP
Sbjct: 742 --HFDTLRITKPEPAALPGLDTKHIVGIACGP 771


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2965 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3074

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3075 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3181

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3241

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3300

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3301 NRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 192/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4076

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  ++ G  H+A +T+AG LFT+G G +G LGHGD   
Sbjct: 4077 GHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4135

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4136 QLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L +    +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4184 RGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4243

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4244 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4302

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 4303 LQGKKINRVACGSAHTLA 4320



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3015 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSNYVVKKVAVHSGGRHAMA 3065

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G++FSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3066 LTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3125

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3126 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3182

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3183 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3230

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T TG VY  G   +
Sbjct: 3231 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3290

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3291 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V +IA GG H+A 
Sbjct: 4061 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDIAAGGAHSAC 4110

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G++F+WG+   GRLGHG   D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4111 ITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT 4170

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L  + V  V CG   +  +T +G ++T+G G
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTDLGVVKVECGSQFSVALTKSGAVYTWGKG 4229

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4230 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4277

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4278 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4324

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P   GKLPT+V   +  N ++EI
Sbjct: 4325 --KPANAGKLPTQV--PMEYNHLQEI 4346



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            V+  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2948 VRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3005

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3006 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRH 3062

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3063 AMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT--- 3119

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3120 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3229

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 167/339 (49%), Gaps = 40/339 (11%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG      +G    ++VS P   + L N+ V  +AC E     ++ +G +YT    
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYT---Q 476

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
             N   LG     SL            + +++ S G  H   +++ G++F++G G  G L
Sbjct: 477 AYNSDTLGPQLVQSL-------ASRNIVKIAAHSDGH-HYLALSANGEVFSWGCGDGGRL 528

Query: 373 GHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           GHGD + +  P+ + +L G +     V  ACG  ++AA+             + G+L+TW
Sbjct: 529 GHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELYTW 576

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYG 486
           G G+ GRLGHG  E + +P  V  L       VSCG   + T+A+T  G V++ G   YG
Sbjct: 577 GRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYG 636

Query: 487 QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           +LG   ++G K P  +E KL    + ++ CG      LT   +VYTWGKG N RLGHG  
Sbjct: 637 KLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
           +   +P L+E LK K+V  +  G++   A+     +H W
Sbjct: 696 EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 179/394 (45%), Gaps = 34/394 (8%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4017 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A +             ++G LFTWG
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT------------AAGDLFTWG 4121

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGHGD E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4122 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4182 LGRGGSDGCKVPMKIDS-LTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAIC-----LHKWVSGVDQSMCSGC-------RI 594
                P  V+ L+ K+V +I  G S     C     ++ W    +  +  G        R+
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATG-SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 4299

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAP 628
                + K+ N   CG  +    S+ K   A   P
Sbjct: 4300 VAALQGKKINRVACGSAHTLAWSTSKPANAGKLP 4333



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 152/329 (46%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGDSL------GDVFIWGECTGDGI 203
           +GR  + +  + DT    L  +++S +  + + H DG         G+VF WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG      G    ++    +           V +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LG-----HGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  V+C  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + +  V CG   +  +T  GQ++T+G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ LKG + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLKGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 748 ITKPEPAALPGLDTKHIVGIACGPAQSFA 776



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG--LGEYGRL 3135

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3136 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3244

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             ++ +  P+ + G L G  +  V+ G  H   VT  GQ++ +GD   G  G+G       
Sbjct: 3245 TDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3303

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3337



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 9/186 (4%)

Query: 403  HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQV 461
            +T ++V        S+     K+F WG  D+ +LG G K +++ VP+    L   N  QV
Sbjct: 2943 NTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQV 3001

Query: 462  SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIAC--GDY 518
            + G     A+T  G VY  G    G+LG   ++G +P  R    L+   V+++A   G  
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3061

Query: 519  HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC-- 576
            H   LT   ++++WG+G +G+LGH    + + P L+EALK K+++ I CG+S +AAI   
Sbjct: 3062 HAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121

Query: 577  --LHKW 580
              L+ W
Sbjct: 3122 GELYTW 3127



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3057

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G    +ALT  G +++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3058 SGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3116

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3117 AITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3176

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3177 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3205



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 117/253 (46%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4006

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4007 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V +IA G  H A +T+  +++TWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGHGD++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4184 RGGSDGCKVPMKI 4196



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 105/212 (49%), Gaps = 31/212 (14%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSA-----VSSSSQGSGHDDGDSL-----GDVFIWGECT 199
           G+ GR GH  G S D     L +      V   S GSG  D  +L     G V+ WG+  
Sbjct: 579 GNYGRLGH--GSSEDQTIPMLVTGLKGLKVIDVSCGSG--DAQTLAVTENGQVWSWGD-- 632

Query: 200 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
           GD    G + R GS  G K     PK +E    LD+  + CG + +  +TK G+V++WG+
Sbjct: 633 GDY---GKLGRGGS-DGCK----TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGK 684

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN-CNFGL 318
               RLGHG +  V +PKL++ LK   V  VA G  H  A+T   ++++WG ++ C    
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ--- 741

Query: 319 LGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 349
             H + + +  P+    P L+  H+  ++CGP
Sbjct: 742 --HFDTLRITKPEPAALPGLDTKHIVGIACGP 771


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/340 (37%), Positives = 178/340 (52%), Gaps = 18/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRH-AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D   P  + +     + ++ CG  H  A    + EV+SWG    GRLGHG  SD+  P  
Sbjct: 54  DRLSPTQLSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLP 113

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL  I ++ +ACG+ H  AVT+ G++ +WG  N N G LG G+     +P+K+    E
Sbjct: 114 IKALHGIRIKQIACGDSHCLAVTMEGEVQSWG-RNQN-GQLGLGDTEDSLVPQKIQ-AFE 170

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           GI +  V+ G  HTA VT  G L+ +G G +G LG GDR     P  V S  G +    A
Sbjct: 171 GIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVA 230

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT +V              SG L+T+G    G+LGHGD E  LVP  + AL     
Sbjct: 231 CGWRHTISV------------SYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVI 278

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGD 517
            Q+S G   T+ALT+ G +Y  G   +GQ+G      +  P +V     +  V+ ++CG 
Sbjct: 279 SQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQ-VSCGW 337

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   +T R  V+ WG+G NG+LG G++ DRNFP ++EAL
Sbjct: 338 RHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEAL 377



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 177/369 (47%), Gaps = 22/369 (5%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H+  +     V SWG    G+LGHG   D   P  + AL +  +  V CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHT 79

Query: 298 CAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + S  ++Y+WG  +  FG LGHGN   L+ P  +   L GI +  ++CG  H   VT
Sbjct: 80  VAYSESRMEVYSWGWGD--FGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 136

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG GD      P+++ + +G+R    A G  HTAAV E       
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 G L+ WG G  G LG GD+  RLVP  V +        V+CG   T++++ +G 
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +YT G   YGQLG       L P ++E  L  + + +I+ G  H   LTS  ++Y WG  
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLVPHKLE-ALGNSVISQISGGWRHTMALTSDGKLYGWGWN 303

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 591
             G++G G+  D+  P  V    D++V  + CG   T A+     +  W  G +  +  G
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363

Query: 592 CRIPFNFKR 600
             +  NF +
Sbjct: 364 ESLDRNFPK 372



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 179/377 (47%), Gaps = 45/377 (11%)

Query: 129 PPKVLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRVSLSSA-----VSS 176
           P +VL+ S  A  SV  LS         G DG+ GH  G + D    +  SA     + S
Sbjct: 14  PRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGH--GDAEDRLSPTQLSALDDHQIVS 71

Query: 177 SSQGSGHDDG--DSLGDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
            + G+ H     +S  +V+ WG   GD G LG          G   D F P  +++   +
Sbjct: 72  VTCGADHTVAYSESRMEVYSWG--WGDFGRLG---------HGNSSDLFTPLPIKALHGI 120

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
            ++ IACG  H   VT +GEV SWG    G+LG G   D   P+ I A + I +++VA G
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG 180

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
             HT AVT  GD+Y WG     +G LG G+     +P+++     G  +S V+CG  HT 
Sbjct: 181 AEHTAAVTEDGDLYGWGWG--RYGNLGLGDRNDRLVPERVT-SAGGEKMSMVACGWRHTI 237

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW-HTAAVVEVMV 412
            V+ +G L+T+G   +G LGHGD      P ++++L G   +    G W HT A+     
Sbjct: 238 SVSYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEAL-GNSVISQISGGWRHTMALT---- 292

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   S GKL+ WG    G++G G+   +  P  V    +    QVSCG   T+A+T
Sbjct: 293 --------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVT 344

Query: 473 TTGHVYTMGSPVYGQLG 489
              +V+  G    GQLG
Sbjct: 345 ERNNVFAWGRGTNGQLG 361


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2962 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3071

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3072 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3128

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3178

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3239 GHGTDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3297

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3012 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSNYVVKKVAVHSGGRHAMA 3062

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3122

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3123 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3227

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T TG VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3287

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3288 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 166/333 (49%), Gaps = 22/333 (6%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y 
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3016

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 3017 CG--EATNGRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3073

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGEL 3121

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 3122 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGH
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P +VE L+ K++  +  G     A+
Sbjct: 3241 GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ +  +AC E     ++ +G +Y    +
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +   G            P+ + G      + +++ S G  H   + + G++F++G G  G
Sbjct: 480 SDTLG------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVFSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +L G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E + +P  V  L       VSCG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSW 734



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 154/329 (46%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  +++  + DT    L   ++S +  + + H DG       + G+VF WG C   G 
Sbjct: 470 NGRV-YMQAYNSDTLGPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG      G    ++    +           V +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LG-----HGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  V+C  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + V  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLQGKKVVDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  PT +  L   +   ++CG + + A
Sbjct: 748 ITKPEPTALPGLDTKHIVGIACGPAQSFA 776



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 16/280 (5%)

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A T+   ++ WG ++ +   LG      + +P   +  L  ++V  V+ G      VT  
Sbjct: 2955 AATIRTKVFVWGLNDKD--QLGGLKGSKIKVPS-FSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 359  GQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+++  G+ T G LG G    +V  PR++ +L      + A    H+        G  + 
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV---HSG-------GRHAM 3061

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
            +    GK+F+WG+GD G+LGH  +     P  + AL       ++CG S + A+T++G +
Sbjct: 3062 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3121

Query: 478  YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKG 535
            YT G   YG+LG      +L  ++   L  + V ++ACG  D     LT    V++WG G
Sbjct: 3122 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              G+LG G ++  N P  +E L  + V  I CG  F+ A+
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG--LGEYGRL 3132

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3133 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3241

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             ++ +  P+ + G L G  +  V+ G  H   VT  GQ++ +GD   G  G+G       
Sbjct: 3242 TDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 110/235 (46%), Gaps = 30/235 (12%)

Query: 279  IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
            ++AL+   V  +ACG      + L+ D   W   + ++G LG G      +P K++  L 
Sbjct: 4009 VEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS-LT 4067

Query: 339  GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
            G+ V  V CG   +  +T +G ++T+G G +  LGHG    V  PR+V  L+G + +  A
Sbjct: 4068 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4127

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
             G  H     E             G+++TWGD D G+LG G   A   P  VAAL     
Sbjct: 4128 TGSLHCVCCTE------------DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4175

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
             +V+CG + T+A +T+                P   GKLPT+V   +  N ++EI
Sbjct: 4176 NRVACGSAHTLAWSTS---------------KPANAGKLPTQV--PMEYNHLQEI 4213



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 106/203 (52%), Gaps = 12/203 (5%)

Query: 227  VESAVVLDVQNIACGGRHAA--LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN 284
            VE+     V +IACG   A    +T    V+SWG+   G+LG G       P  ID+L  
Sbjct: 4009 VEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4068

Query: 285  INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 344
            + V  V CG   + A+T SG +YTWG  +  +  LGHG++  +  P+++ G L+G  V +
Sbjct: 4069 LGVVKVECGSQFSVALTKSGAVYTWGKGD--YHRLGHGSDDHVRRPRQVQG-LQGKKVIA 4125

Query: 345  VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
            ++ G  H    T  G+++T+GD   G LG G   ++  PR V +L+G +  R ACG  HT
Sbjct: 4126 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4185

Query: 405  AAVVEVMVGSSSSSNCSSGKLFT 427
             A        S+S   ++GKL T
Sbjct: 4186 LA-------WSTSKPANAGKLPT 4201



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 106/270 (39%), Gaps = 42/270 (15%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +     
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEA--- 4011

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDGTF 369
                                     L+G  V  ++CG     T  +T    ++++GDG +
Sbjct: 4012 -------------------------LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY 4046

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LG G       P ++DSL GL  V+  CG   + A+ +            SG ++TWG
Sbjct: 4047 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK------------SGAVYTWG 4094

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
             GD  RLGHG  +    P  V  L       ++ G    V  T  G VYT G    GQLG
Sbjct: 4095 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4154

Query: 490  DPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
            D   N     R+   L    +  +ACG  H
Sbjct: 4155 DGTTNAIQRPRLVAALQGKKINRVACGSAH 4184



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 9/165 (5%)

Query: 424  KLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
            K+F WG  D+ +LG G K +++ VP+    L   N  QV+ G     A+T  G VY  G 
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 483  PVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGR 539
               G+LG   ++G +P  R    L+   V+++A   G  H   LT   +V++WG+G +G+
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3079

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
            LGH    + + P L+EALK K+++ I CG+S +AAI     L+ W
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3124



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3054

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G    +ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3055 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3113

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3114 AITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 26/228 (11%)

Query: 141  GSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTG 200
            G   +L +  +DG+   L+G     +RV   +  S  +Q     D D+   V+ WG+  G
Sbjct: 3995 GGEQTLFAVTADGKVEALQG-----YRVIDIACGSGDAQTLCLTDDDT---VWSWGD--G 4044

Query: 201  DGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 260
            D    G + R GS  G K    VP  ++S   L V  + CG + +  +TK G V++WG+ 
Sbjct: 4045 DY---GKLGRGGS-DGCK----VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4096

Query: 261  LGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 320
               RLGHG D  V  P+ +  L+   V  +A G  H    T  G++YTWG +  + G LG
Sbjct: 4097 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN--DEGQLG 4154

Query: 321  HGNEMSLWLPKKLNGPLEGIHVSSVSCG-----PWHTAVVTSAGQLFT 363
             G   ++  P +L   L+G  ++ V+CG      W T+   +AG+L T
Sbjct: 4155 DGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLPT 4201



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 31/212 (14%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSA-----VSSSSQGSGHDDGDSL-----GDVFIWGECT 199
           G+ GR GH  G S D     L +      V   S GSG  D  +L     G V+ WG+  
Sbjct: 579 GNYGRLGH--GSSEDQTIPMLVTGLKGLKVIDVSCGSG--DAQTLAVTENGQVWSWGD-- 632

Query: 200 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
           GD    G + R GS  G K     PK +E    LDV  + CG + +  +TK G+V+SWG+
Sbjct: 633 GDY---GKLGRGGS-DGCK----TPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 684

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN-CNFGL 318
               RLGHG +  V +PKL++ L+   V  VA G  H  A+T   ++++WG ++ C    
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ--- 741

Query: 319 LGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 349
             H + + +  P+    P L+  H+  ++CGP
Sbjct: 742 --HFDTLRITKPEPTALPGLDTKHIVGIACGP 771



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 101/249 (40%), Gaps = 44/249 (17%)

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPT-C--------------------------VAALV 454
            SG ++ WG   RG+LG  +     VPT C                          V AL 
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQ 4013

Query: 455  EPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVE 511
                  ++CG   + T+ LT    V++ G   YG+LG   ++G K+P +++  LT   V 
Sbjct: 4014 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVV 4072

Query: 512  EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            ++ CG      LT    VYTWGKG   RLGHG  D    P  V+ L+ K+V +I  G S 
Sbjct: 4073 KVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG-SL 4131

Query: 572  TAAIC-----LHKWVSGVDQSMCSGC-------RIPFNFKRKRHNCYNCGLVYCHTCSSK 619
                C     ++ W    +  +  G        R+    + K+ N   CG  +    S+ 
Sbjct: 4132 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4191

Query: 620  KSVKASMAP 628
            K   A   P
Sbjct: 4192 KPANAGKLP 4200


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 139/415 (33%), Positives = 211/415 (50%), Gaps = 36/415 (8%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            V++WG    D +        G   G K+   +P   E+   L   +IA G +   +V+++
Sbjct: 3014 VYVWGLNDKDQL--------GGLKGSKIK--LPVYSETLSKLKPIHIAGGSKTLFIVSQE 3063

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ GE   GRLG G D+++  PK I  L    ++ VA   G  H  A+T  G +++W
Sbjct: 3064 GKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 3123

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN +SL  PK +   L+   +  ++CG  H+A + S G+L+T+G G 
Sbjct: 3124 GEGED---GKLGHGNCISLDKPKLIE-VLKSKRIRDIACGSGHSAAIASNGELYTWGLGE 3179

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD I+ + P+ V +L G R V+ ACG             + + +  + G +++W
Sbjct: 3180 YGRLGHGDTITQTRPKLVQALIGHRVVQVACG----------SRDAQTMALTTDGYVYSW 3229

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +    P  V  L      QV CG   ++ALT  G V+T G   Y +L
Sbjct: 3230 GDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRL 3289

Query: 489  GDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G    +  + PT VEG   K  +  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3290 GHGNDHHVRKPTLVEGLRGKKII-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSV 3348

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKR 602
               PSLV  L+D +V  + CG+S + A     WV  VDQ   +G + P  F   R
Sbjct: 3349 NRKPSLVHDLEDARVNRVSCGSSHSIA-----WVL-VDQP-SNGNQDPVTFPTVR 3396



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 190/378 (50%), Gaps = 20/378 (5%)

Query: 202  GILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 260
             I G G +  G   G++     +P   ES   L    +A G +    VT  G+++S G  
Sbjct: 3995 AIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYSTGYG 4054

Query: 261  LGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGL 318
              GRLG G    V  P L+++++++ ++ VA   G  H  A++  G +Y+WG  +   G 
Sbjct: 4055 AAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGD--DGK 4112

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
            LGHGN++S   PK +   L G+ +  ++CG  H+A +TSAG L+T+G G +G LGHGD  
Sbjct: 4113 LGHGNKVSYDRPKLIEDLL-GVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4171

Query: 379  SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS--GKLFTWGDGDRGRL 436
                P+ V++L+  + +  ACG               + + C +    +++WGDGD G+L
Sbjct: 4172 DQLRPKVVEALQDYKVIDVACG------------SGDAQTLCVTDDDNVWSWGDGDYGKL 4219

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK 496
            G G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  
Sbjct: 4220 GRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV 4279

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
               R    L    +  IA G  H    + + EV+TWG    G+LG G T   + P LV A
Sbjct: 4280 RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA 4339

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 4340 LQGKKITRVACGSAHTLA 4357



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 177/337 (52%), Gaps = 41/337 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG   G + G+G     S P   DA+  + ++ + C E     ++L+G++Y     
Sbjct: 500 EVLAWG---GVKFGNG-----STPFYCDAIAELGIKQLCCTERALMILSLNGNVYN---- 547

Query: 313 NCNFGLLGHGNEMSLWLPKKLNG----PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
                 + HG+E     P++++G    P+  I  +S + G  H   +T  G ++++G+G 
Sbjct: 548 ------MYHGSETQY--PQRVHGFSDKPITMI--ASHADGK-HYLALTQDGCVYSWGNGD 596

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G LGHGD IS   P+ +++L     +  ACG  ++AA+             ++G+L+TW
Sbjct: 597 GGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAAL------------SANGELYTW 644

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYG 486
           G G+ GRLGHG+ +  + PT V  L       V+CG   S T+ +T +G V++ G   YG
Sbjct: 645 GRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYG 704

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           +LG    +G    ++  KL    V ++ CG    A LT+  EVYTWGKG   RLGHG  +
Sbjct: 705 KLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEE 764

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
              +P ++E+L+D++VK +  GT+   A+   ++V G
Sbjct: 765 HVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYG 801



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 167/332 (50%), Gaps = 23/332 (6%)

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +Q  V+ WG     +LG    S +  P   + L  +    +A G      V+  G +Y  
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3069

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEG---IHVSSVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G++ ++  PK +  P      I   +V  G  H   +T  G++F++G
Sbjct: 3070 GEGTN---GRLGLGDDNNMCEPKAI--PFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 3124

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+ IS+  P+ ++ LK  R    ACG  H+AA+             S+G+L
Sbjct: 3125 EGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIA------------SNGEL 3172

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +  P  V AL+     QV+CG   + T+ALTT G+VY+ G  
Sbjct: 3173 YTWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDG 3232

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
             +G+LG   ++G     +  +L    V ++ CG      LT   EV+TWGKG   RLGHG
Sbjct: 3233 DFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3292

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +      P+LVE L+ K++  +  G     A+
Sbjct: 3293 NDHHVRKPTLVEGLRGKKIIHVAVGALHCLAV 3324



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 167/328 (50%), Gaps = 21/328 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG      V  P   ++L  +    +A GE    AVT  G +Y+ G 
Sbjct: 3994 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYSTGY 4053

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS--SVSCGPWHTAVVTSAGQLFTFGDGTF 369
                 G LG G   S+ +P  L   ++ + +   +VS G  H   ++S G ++++G+G  
Sbjct: 4054 GAA--GRLGIGGTDSVMIPTLLES-IQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDD 4110

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+++S   P+ ++ L G+  V  ACG  H+AA+             S+G L+TWG
Sbjct: 4111 GKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAIT------------SAGWLYTWG 4158

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGHGD + +L P  V AL +     V+C  G + T+ +T   +V++ G   YG+
Sbjct: 4159 KGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGK 4218

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  L    V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4219 LGRGGSDGCKVPLKIDS-LAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDD 4277

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P  V AL+ K++ SI  G+    A
Sbjct: 4278 HVRRPRKVAALQGKKIISIATGSLHCVA 4305



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 29/289 (10%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G V+ WGE   DG LG          G K+    PK +E  + +++ +IACGG H+A 
Sbjct: 4098 SEGHVYSWGE-GDDGKLG---------HGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAA 4147

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGD 305
            +T  G +++WG+   GRLGHG   D   PK+++AL++  V  VAC  G+  T  VT   +
Sbjct: 4148 ITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN 4207

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +++WG  + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G
Sbjct: 4208 VWSWG--DGDYGKLGRGGSDGCKVPLKIDS-LAGLGVVKVECGSQFSVALTRSGAVYTWG 4264

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GK 424
             G +  LGHG    V  PR+V +L+G + +  A G  H  A             CS  G+
Sbjct: 4265 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA-------------CSDKGE 4311

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            +FTWGD D G+LG G   A   P  V AL      +V+CG + T+A +T
Sbjct: 4312 VFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWST 4360



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 186/378 (49%), Gaps = 34/378 (8%)

Query: 213 SYAGVKM-DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS 271
           ++ GVK  +   P   ++   L ++ + C  R   +++  G V++        + HG  S
Sbjct: 503 AWGGVKFGNGSTPFYCDAIAELGIKQLCCTERALMILSLNGNVYN--------MYHG--S 552

Query: 272 DVSHPKLIDALKNINVELVAC---GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLW 328
           +  +P+ +    +  + ++A    G+H+  A+T  G +Y+WG  N + G LGHG+ +S  
Sbjct: 553 ETQYPQRVHGFSDKPITMIASHADGKHY-LALTQDGCVYSWG--NGDGGRLGHGDTISYD 609

Query: 329 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS 388
            PK +   LE  ++  ++CG  ++A +++ G+L+T+G G +G LGHG+   V TP  V +
Sbjct: 610 EPKLIEALLEK-NIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTT 668

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLV 446
           LKG   V  ACG               S + C  +SG +F+WGDGD G+LG G  +    
Sbjct: 669 LKGHTVVHVACG------------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKT 716

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKL 505
           P  V  L++ N  +V CG   + ALT  G VYT G     +LG   + + + P  +E  L
Sbjct: 717 PKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIES-L 775

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
               V++++ G  H+  LT    VY WG+   G++        + P+L   L  K V  +
Sbjct: 776 RDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQIDPTLGPIISEPTLCPTLSSKTVIGL 835

Query: 566 VCGTSFTAAICLHKWVSG 583
             G + + A C+  W  G
Sbjct: 836 ASGPTQSFAWCMSAWSGG 853



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 127/254 (50%), Gaps = 26/254 (10%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   +SL  LR ++ A G     AV          
Sbjct: 3993 SGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT--------- 4043

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GK+++ G G  GRLG G  ++ ++PT + ++  V      VS G    +AL++ G
Sbjct: 4044 ---ADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEG 4100

Query: 476  HVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            HVY+ G    G+LG   K +   P  +E  L    V+ IACG +H A +TS   +YTWGK
Sbjct: 4101 HVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVD-IACGGHHSAAITSAGWLYTWGK 4159

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG------V 584
            G  GRLGHGD+DD+  P +VEAL+D +V  + CG+     +C+    + W  G      +
Sbjct: 4160 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4219

Query: 585  DQSMCSGCRIPFNF 598
             +    GC++P   
Sbjct: 4220 GRGGSDGCKVPLKI 4233



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 155/337 (45%), Gaps = 34/337 (10%)

Query: 303  SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            SG +Y WG ++   G LG   G ++ L  P +    L  I ++    G      VT+ G+
Sbjct: 3993 SGAIYGWGHNH--RGQLGGLEGPKVKLPAPCESLSALRPIQLAG---GEQTLFAVTADGK 4047

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGSSSSS 418
            +++ G G  G LG G   SV  P  ++S++   ++ V  + G  H  A+           
Sbjct: 4048 IYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIAL----------- 4096

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
              S G +++WG+GD G+LGHG+K +   P  +  L+      ++CG   + A+T+ G +Y
Sbjct: 4097 -SSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLY 4155

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 536
            T G   YG+LG   ++ +L  +V   L    V ++ACG  D     +T    V++WG G 
Sbjct: 4156 TWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4215

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSGVDQSMCSGC 592
             G+LG G +D    P  +++L    V  + CG+ F+ A+     ++ W  G    +  G 
Sbjct: 4216 YGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4275

Query: 593  -------RIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 622
                   R     + K+      G ++C  CS K  V
Sbjct: 4276 DDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 4312



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 36/251 (14%)

Query: 150  GSDGRTGHLKGLSGDTFRVSLSSAVSSS---SQGSGHDDGDSL-----GDVFIWGECTGD 201
            G  GR GH  G S D  R  +  A+          G  D  +L      +V+ WG+  GD
Sbjct: 4160 GRYGRLGH--GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGD--GD 4215

Query: 202  GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
                G + R GS  G K    VP  ++S   L V  + CG + +  +T+ G V++WG+  
Sbjct: 4216 Y---GKLGRGGS-DGCK----VPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGD 4267

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
              RLGHG D  V  P+ + AL+   +  +A G  H  A +  G+++TWG ++   G LG 
Sbjct: 4268 YHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND--EGQLGD 4325

Query: 322  GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
            G   +L  P+ ++  L+G  ++ V+CG  HT   ++A                  R+  S
Sbjct: 4326 GTTSALHRPRLVHA-LQGKKITRVACGSAHTLAWSTAK-------------ATQSRMPAS 4371

Query: 382  TPREVDSLKGL 392
            TP E D +K L
Sbjct: 4372 TPMEYDLVKDL 4382



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 81/163 (49%), Gaps = 13/163 (7%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+ WG+  GD    G + R GS        + P  V+    L V  + CG + +  +T
Sbjct: 3224 GYVYSWGD--GDF---GKLGRGGSDG-----CYTPLLVDRLNNLGVIQVECGAQFSLALT 3273

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            K GEV++WG+    RLGHG D  V  P L++ L+   +  VA G  H  AVT +G +Y W
Sbjct: 3274 KYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAW 3333

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
            G +  + G  G+G   S+     L   LE   V+ VSCG  H+
Sbjct: 3334 GDN--DHGQQGNGT-TSVNRKPSLVHDLEDARVNRVSCGSSHS 3373


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3998 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4105 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4270

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4271 LPEGRARNHNRPQQIP-VLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4329

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4330 HVREPTLVTGLQGKNVRQISAGRCHSAA 4357



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4051

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4052 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4156

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4277 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4306



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 161/344 (46%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 4050 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 4101 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 4149

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV+  G M  
Sbjct: 4150 TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-V 4208

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+++  L G+     A G  HT A+             S+G ++ W
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAW 4315

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V  L   N  Q+S G   + A T
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3991 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4037

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4097

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4098 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4154

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4155 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4203

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4204 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4263

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4264 LPEGRARNHNRPQQIP-VLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4322

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4323 HVREPTLVTGLQGKNVRQISAGRCHSAA 4350



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3991 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4044

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4045 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4102 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4149

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4150 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4209

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4210 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4269

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4270 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4299



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 161/344 (46%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 4043 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4093

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 4094 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 4142

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV+  G M  
Sbjct: 4143 TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-V 4201

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 4202 WAFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4260

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+++  L G+     A G  HT A+             S+G ++ W
Sbjct: 4261 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAW 4308

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V  L   N  Q+S G   + A T
Sbjct: 4309 GSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3990 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4036

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4096

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4097 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4153

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4154 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4202

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4203 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4262

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4263 LPEGRARNHNRPQQIP-VLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4321

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4322 HVREPTLVTGLQGKNVRQISAGRCHSAA 4349



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3990 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4043

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4044 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4100

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4101 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4148

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4149 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4208

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4209 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4268

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4269 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4298



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 161/344 (46%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 4042 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4092

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 4093 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 4141

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV+  G M  
Sbjct: 4142 TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-V 4200

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 4201 WAFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4259

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+++  L G+     A G  HT A+             S+G ++ W
Sbjct: 4260 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAW 4307

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V  L   N  Q+S G   + A T
Sbjct: 4308 GSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4351



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3983 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4029

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4030 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4089

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4090 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4146

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4147 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4195

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4255

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4256 LPEGRARNHNRPQQIP-VLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4314

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4315 HVREPTLVTGLQGKNVRQISAGRCHSAA 4342



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3983 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4036

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4037 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4093

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4094 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4141

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4142 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4201

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4202 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4261

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4262 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4291



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 161/344 (46%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 4035 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4085

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 4086 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 4134

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV+  G M  
Sbjct: 4135 TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-V 4193

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 4194 WAFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4252

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+++  L G+     A G  HT A+             S+G ++ W
Sbjct: 4253 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAW 4300

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V  L   N  Q+S G   + A T
Sbjct: 4301 GSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4344



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3991 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4037

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4097

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4098 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4154

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4155 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SVDGSMVWA 4203

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4204 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4263

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4264 LPEGRARNHNRPQQIP-VLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4322

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4323 HVREPTLVTGLQGKNVRQISAGRCHSAA 4350



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3991 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4044

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4045 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4102 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4149

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4150 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDY 4209

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4210 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4269

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4270 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4299



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 162/344 (47%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 4043 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4093

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 4094 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 4142

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV++ G M  
Sbjct: 4143 TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSM-V 4201

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 4202 WAFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4260

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+++  L G+     A G  HT A+             S+G ++ W
Sbjct: 4261 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAW 4308

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V  L   N  Q+S G   + A T
Sbjct: 4309 GSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3998 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4105 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4270

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4271 LPEGRARNHNRPQQIP-VLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4329

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4330 HVREPTLVTGLQGKNIRQISAGRCHSAA 4357



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4051

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4052 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4156

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4277 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4306



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 161/344 (46%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 4050 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 4101 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 4149

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV+  G M  
Sbjct: 4150 TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-V 4208

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+++  L G+     A G  HT A+             S+G ++ W
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAW 4315

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V  L   N  Q+S G   + A T
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 136/388 (35%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3997 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4043

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4104 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4209

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4269

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P +V   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4270 LPEGRARNHNRPQQVP-VLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4328

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4329 HVREPTLVTGLQGKNVRQISAGRCHSAA 4356



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4050

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4051 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4155

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4215

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4275

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  V  L    ++ +  G   T A+
Sbjct: 4276 RNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 4305



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4146 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4202

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4203 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4323 GLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.8 bits (112), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ V     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4281 PQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 4340

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4341 GKNVRQISAGRCHSAAWT 4358


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 132/393 (33%), Positives = 203/393 (51%), Gaps = 33/393 (8%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +  GG+  S     V+ D F+ +       L   +IA G +   +V+ +
Sbjct: 2057 VFVWGLNDKDQL--GGMKGSKVKLPVQSD-FLSQ-------LWPIHIAGGSKSLFIVSHE 2106

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ GE   GRLG G  ++V +P+ I  L    ++ VA   G  H  A+TL G +++W
Sbjct: 2107 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 2166

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN ++L  PK +   L    +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 2167 GEGED---GKLGHGNRLNLDKPKMIEA-LRSKKIRDIACGSSHSAAITSSGELYTWGLGE 2222

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSSSSNCSSGKLF 426
            +G LGHGD I+   P+ + SL G R V+ ACG     T A+ +             G +F
Sbjct: 2223 YGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTD------------EGWVF 2270

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            +WGDGD G+LG G  E   +P  +  L      Q+ CG   ++ALT TG V+T G   Y 
Sbjct: 2271 SWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYF 2330

Query: 487  QLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            +LG     + + PT +E    K  +  +A G  H   +T   +VY WG   +G+ G+G T
Sbjct: 2331 RLGHGSDQHVRKPTVIESLKDKKVI-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 2389

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
                 P+LV  L+D  +  + CG+S + A  L 
Sbjct: 2390 IVNRKPALVHGLEDVHINRVACGSSHSIAWTLQ 2422



 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 201/408 (49%), Gaps = 33/408 (8%)

Query: 195  WGECTGDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQG 252
            WG   G G I G G +  G   G++     +P   E+   L    +  G +    VT  G
Sbjct: 3027 WG---GSGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADG 3083

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG 310
            +V++ G   GGRLG G    V  P L+++++++ ++ +A   G  H  A++   D+Y+WG
Sbjct: 3084 KVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWG 3143

Query: 311  GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
              +   G LGHGN ++   PK +   L+G  +  ++CG  H+A +TS GQL+T+G G +G
Sbjct: 3144 EGD--DGKLGHGNRLACETPKLIEA-LQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYG 3200

Query: 371  VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTW 428
             LGHGD      P+ ++ L G + +  ACG               + + C      +++W
Sbjct: 3201 RLGHGDSEDQLKPKLIEELVGYKVIDVACG------------SGDAQTLCITDDDNVWSW 3248

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +L
Sbjct: 3249 GDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRL 3308

Query: 489  GDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P +V     K  +  IA G  H    +   EV+TWG    G+LG   T+ 
Sbjct: 3309 GHGTGEHVRRPKKVAALQGKKII-SIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNA 3367

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIP 595
               P LV AL+ K++ ++ CG++ T A     W +    S C+  R+P
Sbjct: 3368 IQRPRLVSALQGKKITNVACGSAHTLA-----WSTNNASSACA--RLP 3408



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 148/286 (51%), Gaps = 29/286 (10%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV+ WGE   DG LG          G ++    PK +E+    ++ +IACGG H+A +T 
Sbjct: 3138 DVYSWGE-GDDGKLG---------HGNRLACETPKLIEALQGYEIIDIACGGAHSAAITS 3187

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
             G++++WG+   GRLGHG   D   PKLI+ L    V  VAC  G+  T  +T   ++++
Sbjct: 3188 TGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWS 3247

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  + ++G LG G      +PKK+   L G+ V  V CG   +  +T +G ++T+G G 
Sbjct: 3248 WG--DGDYGKLGRGGSDGCKVPKKIES-LAGLGVIKVECGSQFSVALTRSGSVYTWGKGD 3304

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFT 427
            +  LGHG    V  P++V +L+G + +  A G  H  A             CS  G++FT
Sbjct: 3305 YHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDEGEVFT 3351

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            WGD D G+LG     A   P  V+AL       V+CG + T+A +T
Sbjct: 3352 WGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLAWST 3397



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 149/306 (48%), Gaps = 29/306 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG          G +++   PK +E+     +++IACG  H+A +T
Sbjct: 2161 GKVFSWGEGE-DGKLG---------HGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAIT 2210

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+++WG    GRLGHG +     PKLI +L    +  VACG  +  T A+T  G ++
Sbjct: 2211 SSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVF 2270

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G      +P  +   L  + V  + CG   +  +T  G+++T+G G
Sbjct: 2271 SWG--DGDFGKLGRGGSEGCNIPHNIER-LNALEVVQIECGAQFSLALTKTGEVWTWGKG 2327

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  P  ++SLK  + +  A G  H  AV +            +G+++ 
Sbjct: 2328 DYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTD------------TGQVYA 2375

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVY 485
            WGD D G+ G+G       P  V  L + +  +V+CG  HS+   L  T  V  +   ++
Sbjct: 2376 WGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWTLQDTQVVSKVEPVIF 2435

Query: 486  GQLGDP 491
                DP
Sbjct: 2436 PVAKDP 2441



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 93/191 (48%), Gaps = 14/191 (7%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GKL+  G+G  GRLG G       P  +  L +    +V+   G    +ALT  G V++ 
Sbjct: 2107 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 2166

Query: 481  GSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            G    G+LG   + N   P  +E   +K  + +IACG  H A +TS  E+YTWG G  GR
Sbjct: 2167 GEGEDGKLGHGNRLNLDKPKMIEALRSKK-IRDIACGSSHSAAITSSGELYTWGLGEYGR 2225

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGT--SFTAAICLHKWV--------SGVDQSMC 589
            LGHGD   +  P L+++L   ++  + CG+  + T A+    WV          + +   
Sbjct: 2226 LGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGS 2285

Query: 590  SGCRIPFNFKR 600
             GC IP N +R
Sbjct: 2286 EGCNIPHNIER 2296


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  192 bits (488), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3987 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4033

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4034 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4093

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4094 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4150

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4151 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4199

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4200 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4259

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4260 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4318

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4319 HVREPTLVTVLQGKNVRQISAGRCHSAA 4346



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3987 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4040

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4041 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4097

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4098 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4145

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4146 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4205

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4206 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4265

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4266 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4295



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4076 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4135

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4136 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4192

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4193 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4252

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4253 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4312

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4313 GLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4348



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4271 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4330

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4331 GKNVRQISAGRCHSAAWT 4348


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  192 bits (488), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3998 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4105 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4270

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4271 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4329

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4330 HVREPTLVTVLQGKNVRQISAGRCHSAA 4357



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  V AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4051

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4052 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4156

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4217 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4277 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4306



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4147 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4324 GLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 156/309 (50%), Gaps = 40/309 (12%)

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T  V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V++
Sbjct: 365 TPIVSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVIS 419

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVM 411
           + G +   G G++G LG GD  + ST +++      S+K + + + + G  HT A     
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT--- 474

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVA 470
                    + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A
Sbjct: 475 ---------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RT 527
           +T  G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT 582

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
            V+++G G NG+LGHGDT+    P +VEAL+   ++ +  G+  + A+     ++ W  G
Sbjct: 583 -VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641

Query: 584 VDQSMCSGC 592
                C GC
Sbjct: 642 A----CLGC 646



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK VE+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.4 bits (111), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4282 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4341

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4342 GKNVRQISAGRCHSAAWT 4359


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 212/413 (51%), Gaps = 30/413 (7%)

Query: 171  SSAVSSSSQGSGHDDGDSLG-DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVES 229
            +SA    SQ S  +   ++G  VF+WG    D +  GG+  S     V+ D F+ +    
Sbjct: 2874 TSANVGRSQDSTGEPSSTVGCRVFVWGLNDKDQL--GGMKGSKVKLPVQSD-FLSQ---- 2926

Query: 230  AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL 289
               L   +IA G +   +V+ +G++++ GE   GRLG G  ++V +P+ I  L    ++ 
Sbjct: 2927 ---LWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKK 2983

Query: 290  VAC--GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
            VA   G  H  A+TL G +++WG G +   G LGHGN ++L  PK +   L    +  ++
Sbjct: 2984 VAVHSGGKHAMALTLDGKVFSWGEGED---GKLGHGNRLNLDKPKMIEA-LRSKKIRDIA 3039

Query: 347  CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            CG  H+A +TS+G+L+T+G G +G LGHGD I+   P+ + SL G R V+ ACG      
Sbjct: 3040 CGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACG------ 3093

Query: 407  VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
                   + + +    G +F+WGDGD G+LG G  E   +P  +  L      Q+ CG  
Sbjct: 3094 ----SRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQ 3149

Query: 467  LTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             ++ALT TG V+T G   Y +LG     + + PT +E    K  +  +A G  H   +T 
Sbjct: 3150 FSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVI-HVAVGALHCLAVTD 3208

Query: 526  RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
              +VY WG   +G+ G+G T     P+LV  L+D  +  + CG+S + A  L 
Sbjct: 3209 TGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWTLQ 3261



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 201/408 (49%), Gaps = 33/408 (8%)

Query: 195  WGECTGDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQG 252
            WG   G G I G G +  G   G++     +P   E+   L    +  G +    VT  G
Sbjct: 3866 WG---GSGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADG 3922

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG 310
            +V++ G   GGRLG G    V  P L+++++++ ++ +A   G  H  A++   D+Y+WG
Sbjct: 3923 KVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWG 3982

Query: 311  GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
              +   G LGHGN ++   PK +   L+G  +  ++CG  H+A +TS GQL+T+G G +G
Sbjct: 3983 EGD--DGKLGHGNRLACETPKLIEA-LQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYG 4039

Query: 371  VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTW 428
             LGHGD      P+ ++ L G + +  ACG               + + C      +++W
Sbjct: 4040 RLGHGDSEDQLKPKLIEELVGYKVIDVACG------------SGDAQTLCITDDDNVWSW 4087

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +L
Sbjct: 4088 GDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRL 4147

Query: 489  GDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P +V     K  +  IA G  H    +   EV+TWG    G+LG   T+ 
Sbjct: 4148 GHGTGEHVRRPKKVAALQGKKII-SIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNA 4206

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIP 595
               P LV AL+ K++ ++ CG++ T A     W +    S C+  R+P
Sbjct: 4207 IQRPRLVSALQGKKITNVACGSAHTLA-----WSTNNASSACA--RLP 4247



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 171/351 (48%), Gaps = 33/351 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+  ++   L ++ I C  R   ++T+ G+VF               SD   P+ +  L 
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF----------MYYSSDTQCPQEMTGLS 511

Query: 284 NINVELVAC---GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
            IN+  +A    G+H+  A+T   ++Y+WG  N + G LGHG+  +   P  +   L+G 
Sbjct: 512 GINMIKIAAHPEGKHY-LALTKDYEVYSWG--NGDGGRLGHGDTSTKEEPTLIQA-LKGK 567

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            +  V CG  ++A +++ G L+T+G G +G LGHG      TP  + +L     ++ ACG
Sbjct: 568 DIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACG 627

Query: 401 VW--HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            +  HT  +             S GK+++WGDGD G+LG G  +   +P  +  L     
Sbjct: 628 SFYAHTLCIT------------SQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKI 675

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFVEEIACGD 517
            QV CG   +VAL+  GHVYT G     +LG P + N + P  VE  L    V  ++ G 
Sbjct: 676 VQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVE-VLRDRKVVGVSLGV 734

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
            HV  LT + EVY WGK  N ++          P L+EALK ++V  + CG
Sbjct: 735 SHVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCG 785



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 148/286 (51%), Gaps = 29/286 (10%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV+ WGE   DG LG          G ++    PK +E+    ++ +IACGG H+A +T 
Sbjct: 3977 DVYSWGE-GDDGKLG---------HGNRLACETPKLIEALQGYEIIDIACGGAHSAAITS 4026

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
             G++++WG+   GRLGHG   D   PKLI+ L    V  VAC  G+  T  +T   ++++
Sbjct: 4027 TGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWS 4086

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  + ++G LG G      +PKK+   L G+ V  V CG   +  +T +G ++T+G G 
Sbjct: 4087 WG--DGDYGKLGRGGSDGCKVPKKIES-LAGLGVIKVECGSQFSVALTRSGSVYTWGKGD 4143

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFT 427
            +  LGHG    V  P++V +L+G + +  A G  H  A             CS  G++FT
Sbjct: 4144 YHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDEGEVFT 4190

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            WGD D G+LG     A   P  V+AL       V+CG + T+A +T
Sbjct: 4191 WGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLAWST 4236



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 164/326 (50%), Gaps = 41/326 (12%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGD---MYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           P+  D L  + ++ + C +     +T +G    MY    + C               P++
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQC---------------PQE 506

Query: 333 LNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK 390
           + G L GI++  ++  P   H   +T   +++++G+G  G LGHGD  +   P  + +LK
Sbjct: 507 MTG-LSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALK 565

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
           G   +   CG            G+ S++  ++G L+TWG G+ GRLGHG  E  L PT +
Sbjct: 566 GKDIIDVECG------------GTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMI 613

Query: 451 AALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTK 507
           +AL + +  +V+CG  ++ T+ +T+ G VY+ G   YG+LG   ++G KLP  +E KL  
Sbjct: 614 SALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIE-KLQN 672

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             + ++ CG      L+    VYTWGKG   +LGH   ++  FP +VE L+D++V  +  
Sbjct: 673 VKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSL 732

Query: 568 GTSFTAAIC----LHKWVSGVDQSMC 589
           G S   A+     ++ W    ++ +C
Sbjct: 733 GVSHVLALTDQGEVYGWGKNENKQIC 758



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 28/329 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  +++    D+ ++ CGG ++A ++  G +++WG    GRLGHG   D   P +I AL 
Sbjct: 558 PTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALS 617

Query: 284 NINVELVACGEH--HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           + ++  VACG    HT  +T  G +Y+WG  + ++G LG G      LP+ +   L+ + 
Sbjct: 618 DEHIIKVACGSFYAHTLCITSQGKVYSWG--DGDYGKLGRGGSDGSKLPRLIE-KLQNVK 674

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           +  V CG   +  ++  G ++T+G G    LGH    +V  P  V+ L+  + V  + GV
Sbjct: 675 IVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGV 734

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            H  A+ +             G+++ WG  +  ++    +     P  + AL       V
Sbjct: 735 SHVLALTD------------QGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGV 782

Query: 462 SCGHSLTVALTTTGH-VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC----- 515
            CG + + A T           P    LG+ +    +   +E  LT    ++  C     
Sbjct: 783 CCGPAQSFAWTDDNERTPKTAVPFVIDLGE-QTFKLIENLLEVVLTNTIAQDKECIAVSA 841

Query: 516 -GDYHV---AVLTSRTEVYTWGKGANGRL 540
               H+    ++++  +  T G GAN +L
Sbjct: 842 LNLLHLQLHCIISNNLDTKTLGIGANSKL 870



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 93/191 (48%), Gaps = 14/191 (7%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GKL+  G+G  GRLG G       P  +  L +    +V+   G    +ALT  G V++ 
Sbjct: 2946 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 3005

Query: 481  GSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            G    G+LG   + N   P  +E   +K  + +IACG  H A +TS  E+YTWG G  GR
Sbjct: 3006 GEGEDGKLGHGNRLNLDKPKMIEALRSKK-IRDIACGSSHSAAITSSGELYTWGLGEYGR 3064

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGT--SFTAAICLHKWV--------SGVDQSMC 589
            LGHGD   +  P L+++L   ++  + CG+  + T A+    WV          + +   
Sbjct: 3065 LGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGS 3124

Query: 590  SGCRIPFNFKR 600
             GC IP N +R
Sbjct: 3125 EGCNIPHNIER 3135


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3998 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4105 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4270

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4271 LPEGRARNHNRPQQIP-VLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4329

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4330 HVREPTLVTGLQGKNIRQISAGRCHSAA 4357



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4051

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4052 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4156

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4277 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4306



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 161/344 (46%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 4050 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 4101 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 4149

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV+  G M  
Sbjct: 4150 TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-V 4208

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+++  L G+     A G  HT A+             S+G ++ W
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAW 4315

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V  L   N  Q+S G   + A T
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3998 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4105 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SVDGSMVWA 4210

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4270

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4271 LPEGRARNHNRPQQIP-VLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4329

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4330 HVREPTLVTGLQGKNVRQISAGRCHSAA 4357



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4051

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4052 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4156

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDY 4216

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4277 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4306



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 162/344 (47%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 4050 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 4101 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 4149

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV++ G M  
Sbjct: 4150 TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSM-V 4208

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+++  L G+     A G  HT A+             S+G ++ W
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAW 4315

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V  L   N  Q+S G   + A T
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3961 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4007

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4008 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4067

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4068 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4124

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4125 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4173

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4174 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4233

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4234 LPEGRARNHNRPQQIP-VLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4292

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4293 HVREPTLVTGLQGKNVRQISAGRCHSAA 4320



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3961 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4014

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4015 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4071

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4072 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4119

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4120 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4179

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4180 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4239

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4240 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4269



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 161/344 (46%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 4013 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4063

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 4064 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 4112

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV+  G M  
Sbjct: 4113 TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-V 4171

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 4172 WAFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4230

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+++  L G+     A G  HT A+             S+G ++ W
Sbjct: 4231 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAW 4278

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V  L   N  Q+S G   + A T
Sbjct: 4279 GSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4322



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 200/390 (51%), Gaps = 29/390 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            V++WG    D +        G   G K+   +P   E    L   +IA G +   +V+++
Sbjct: 2792 VYVWGLNDKDQL--------GGLKGSKIK--LPVYSEVLSKLKPVHIAGGSKTLFVVSQE 2841

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ GE   GRLG G DS+V  PK I  L    ++ VA   G  H  A+T  G +++W
Sbjct: 2842 GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSW 2901

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN +SL  P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 2902 GEGED---GKLGHGNSISLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGE 2957

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  + S P+ V SL G R ++ ACG             + + +  + G +++W
Sbjct: 2958 YGRLGHGDTATQSKPKLVQSLVGQRVIQIACG----------SRDAQTMALTADGLVYSW 3007

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +    P  +  L      Q+ CG   ++ALT  G V+T G   Y +L
Sbjct: 3008 GDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRL 3067

Query: 489  GDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G    +  + PT VEG   K  +  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3068 GHGNDHHVRKPTLVEGLRGKKII-HVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIV 3126

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
               PSLV  L D +V  + CG+S + A  L
Sbjct: 3127 NKKPSLVHELDDARVNRVSCGSSHSIAWVL 3156



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 192/392 (48%), Gaps = 29/392 (7%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            D  G ++ WG     G LGG         G K+   +P   ES   L    +  G +   
Sbjct: 3781 DGSGAIYGWGH-NHRGQLGG-------LEGAKVK--LPVLCESLSALRPVQLTGGEQTLF 3830

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSG 304
             VT  G+V++ G    GRLG G    V  P L+++++++ V+ VA   G  H  A++  G
Sbjct: 3831 AVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 3890

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
             +Y+WG  +   G LGHGN +S   PK +   L G  +  ++CG  H+A +TSAG L+T+
Sbjct: 3891 HVYSWGEGD--DGKLGHGNRLSYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYTW 3947

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG- 423
            G G +G LGHGD     TP+ +++L+  + +  ACG               + + C +  
Sbjct: 3948 GKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG------------SGDAQTLCVTDD 3995

Query: 424  -KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
              +++WGDGD G+LG G  +   +P  + +L      +V CG   +VALT +G +YT G 
Sbjct: 3996 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGK 4055

Query: 483  PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
              Y +LG    +     R    L    +  IA G  H    T + EV+TWG    G+LG 
Sbjct: 4056 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGD 4115

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G T     P LV AL+ K++  + CG++ T A
Sbjct: 4116 GTTSALQRPRLVHALQGKKITRVACGSAHTLA 4147



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/286 (35%), Positives = 148/286 (51%), Gaps = 27/286 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+ WGE   DG LG G   S            PK +E  +  ++ +IACGG H+A +T
Sbjct: 3890 GHVYSWGE-GDDGKLGHGNRLSYDR---------PKLIEELLGTEIVDIACGGHHSAAIT 3939

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
              G +++WG+   GRLGHG   D   PKLI+AL++  V  VAC  G+  T  VT   +++
Sbjct: 3940 SAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVW 3999

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LG G      +P K+   L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4000 SWG--DGDYGKLGRGGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4056

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V +L+G + +  A G  H  A  +             G++FT
Sbjct: 4057 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTD------------KGEVFT 4104

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            WGD D G+LG G   A   P  V AL      +V+CG + T+A +T
Sbjct: 4105 WGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWST 4150



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 147/287 (51%), Gaps = 27/287 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG G         + +D   P+ +ES     +++IACG  H+A +T
Sbjct: 2896 GKVFSWGEGE-DGKLGHG-------NSISLDK--PRLIESLKSKRIRDIACGSGHSAAIT 2945

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+++WG    GRLGHG  +  S PKL+ +L    V  +ACG  +  T A+T  G +Y
Sbjct: 2946 SSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVY 3005

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G     + P  ++  L G+ V  + CG   +  +T  G+++T+G G
Sbjct: 3006 SWG--DGDFGKLGRGGSDGCYTPLLIDR-LNGLGVVQIECGAQFSLALTKYGEVWTWGKG 3062

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG+   V  P  V+ L+G + +  A G  H  AV ++            G+++ 
Sbjct: 3063 DYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDI------------GQVYA 3110

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            WGD D G+ G+G       P+ V  L +    +VSCG S ++A   T
Sbjct: 3111 WGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3157



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 139/283 (49%), Gaps = 27/283 (9%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G H   +T+   V+SWG    GRLGHG  +    PKLI+AL   N+  +ACG  ++ A++
Sbjct: 511 GTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALS 570

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG----PWHTAVVTS 357
            +G++YTWG    N+G LGHGN     +   L   L G  V  V+CG    P  T  VT+
Sbjct: 571 SNGELYTWGRG--NYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDP-QTLCVTA 627

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           +G +F++GDG  G LG G      TP+ VD L  +   +  CG   +AA+          
Sbjct: 628 SGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALT--------- 678

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
              + G+++TWG G+  +LGHG+++    P  +  L       +  GH   +ALT    V
Sbjct: 679 ---AYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLV 735

Query: 478 YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACG 516
           Y  G   +GQ+ DP     +P   E  L   F    V  +ACG
Sbjct: 736 YGWGRNDHGQI-DPALGTIVP---EPTLCPTFSGKNVIGLACG 774



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 137/288 (47%), Gaps = 17/288 (5%)

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           H  A+T    +Y+WG   C  G LGHGN M+ +   KL   L   +++ ++CG  ++A +
Sbjct: 513 HYLALTQDNSVYSWGNGEC--GRLGHGN-MTWYDEPKLIEALVEKNITFIACGSTYSAAL 569

Query: 356 TSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           +S G+L+T+G G +G LGHG+    V  P  V +L G   V  ACG            G 
Sbjct: 570 SSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGG-----------GR 618

Query: 415 SSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
              + C  +SG +F+WGDG+ G+LG G  +    P  V  L++ N  +V CG   + ALT
Sbjct: 619 DPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALT 678

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G VYT G     +LG    +     ++   L    ++++  G  HV  LT    VY W
Sbjct: 679 AYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGW 738

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKW 580
           G+  +G++          P+L      K V  + CG + + A C   W
Sbjct: 739 GRNDHGQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAWCTAAW 786



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 165/338 (48%), Gaps = 44/338 (13%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG          V  +   P   D +  + ++ + C E     ++++G++Y     
Sbjct: 437 EVIAWGSV--------VTFNGPSPVYYDTISELGIKQLCCTERAVIILSVNGNVY----- 483

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                ++ +G+E      +++ G  E     ++S S G  H   +T    ++++G+G  G
Sbjct: 484 -----MMYYGSET-----QRVYGFSEKPITMIASHSDGT-HYLALTQDNSVYSWGNGECG 532

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LGHG+      P+ +++L        ACG  ++AA+             S+G+L+TWG 
Sbjct: 533 RLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAAL------------SSNGELYTWGR 580

Query: 431 GDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCG---HSLTVALTTTGHVYTMGSPVY 485
           G+ G+LGHG  DK+  ++PT V AL       V+CG      T+ +T +G V++ G   +
Sbjct: 581 GNYGKLGHGNSDKDV-MIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNH 639

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           G+LG    +G    ++  KL    V ++ CG    A LT+  EVYTWGKG + +LGHG+ 
Sbjct: 640 GKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNE 699

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
           D   +P +++ LK K++K +  G     A+   + V G
Sbjct: 700 DHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYG 737



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 26/255 (10%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   +SL  LR V+   G     AV          
Sbjct: 3783 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT--------- 3833

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GK++  G G  GRLG G  ++ +VPT + ++  V      V+ G    +AL++ G
Sbjct: 3834 ---ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 3890

Query: 476  HVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            HVY+ G    G+LG   + +   P  +E  L    V+ IACG +H A +TS   +YTWGK
Sbjct: 3891 HVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWGK 3949

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG------V 584
            G  GRLGHGD++D+  P L+EAL+D +V  + CG+     +C+    + W  G      +
Sbjct: 3950 GRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4009

Query: 585  DQSMCSGCRIPFNFK 599
             +    GC+IP   +
Sbjct: 4010 GRGGSDGCKIPMKIE 4024



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 124/254 (48%), Gaps = 19/254 (7%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDAL 282
           PK +E+ V  ++  IACG  ++A ++  GE+++WG    G+LGHG  D DV  P L+ AL
Sbjct: 545 PKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTAL 604

Query: 283 KNINVELVACG---EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
               V  VACG   +  T  VT SG +++WG  + N G LG G       PK ++  L+ 
Sbjct: 605 NGHMVVYVACGGGRDPQTLCVTASGIVFSWG--DGNHGKLGRGGCDGSKTPKIVDKLLD- 661

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           I+V+ V CG   +A +T+ G+++T+G G    LGHG+   V  P+ +D LK  +      
Sbjct: 662 INVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYI 721

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           G  H  A+ E  +            ++ WG  D G++          PT        N  
Sbjct: 722 GHLHVLALTEDQL------------VYGWGRNDHGQIDPALGTIVPEPTLCPTFSGKNVI 769

Query: 460 QVSCGHSLTVALTT 473
            ++CG + + A  T
Sbjct: 770 GLACGPTQSFAWCT 783



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 23/289 (7%)

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            SG +Y WG ++   G LG      + LP  L   L  +    ++ G      VT+ G+++
Sbjct: 3783 SGAIYGWGHNH--RGQLGGLEGAKVKLPV-LCESLSALRPVQLTGGEQTLFAVTADGKVY 3839

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC--GVWHTAAVVEVMVGSSSSSNC 420
              G G  G LG G   SV  P  ++S++ +   + A   G  H  A+             
Sbjct: 3840 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLAL------------S 3887

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            S G +++WG+GD G+LGHG++ +   P  +  L+      ++CG   + A+T+ G +YT 
Sbjct: 3888 SEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTW 3947

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANG 538
            G   YG+LG   +  +L  ++   L    V ++ACG  D     +T    V++WG G  G
Sbjct: 3948 GKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4007

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 583
            +LG G +D    P  +E+L    V  + CG+ F+ A+     ++ W  G
Sbjct: 4008 KLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4056



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 92/190 (48%), Gaps = 12/190 (6%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GKL+  G+G  GRLG GD      P  +  L +    +V+   G    +ALT  G V++ 
Sbjct: 2842 GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSW 2901

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            G    G+LG   +      R+   L    + +IACG  H A +TS  E+YTWG G  GRL
Sbjct: 2902 GEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 2961

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGT------SFTAAICLHKWVSG----VDQSMCS 590
            GHGDT  ++ P LV++L  ++V  I CG+      + TA   ++ W  G    + +    
Sbjct: 2962 GHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSD 3021

Query: 591  GCRIPFNFKR 600
            GC  P    R
Sbjct: 3022 GCYTPLLIDR 3031



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 26/181 (14%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG+     +  GG   S +          PK V+  + ++V  + CG + +A +T
Sbjct: 629 GIVFSWGDGNHGKLGRGGCDGSKT----------PKIVDKLLDINVAKVYCGQQFSAALT 678

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             GEV++WG+    +LGHG +  V +PK+ID LK   ++ +  G  H  A+T    +Y W
Sbjct: 679 AYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGW 738

Query: 310 GGSNCNFGLLGHGN---EMSLWLPKKLNGP-LEGIHVSSVSCGP-----WHTAVVTSAGQ 360
           G ++       HG     +   +P+    P   G +V  ++CGP     W TA  + A +
Sbjct: 739 GRND-------HGQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAWCTAAWSVANR 791

Query: 361 L 361
           +
Sbjct: 792 V 792


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 200/391 (51%), Gaps = 34/391 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           DVF+WG    D +        G   G K+ S  P   +    L  + IA G +    +T 
Sbjct: 559 DVFMWGLNDKDQL--------GGLKGSKVKS--PTLCDHLSSLQCKFIAGGSKSTFFITN 608

Query: 251 QGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
           +G+++S GE   G+LG G +  +V+ P+L+  L  + V  V+   G +H  A+T  G  +
Sbjct: 609 KGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAF 668

Query: 308 TWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           +WG G N   G LGHGN MS   P  +   +  I V+ +SCG  H+A +     L+T+G 
Sbjct: 669 SWGDGEN---GQLGHGNLMSCSKPHLIEAFVGKI-VTDISCGSAHSAAIVENKYLYTWGL 724

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG--K 424
           G FG LGHGD  ++  P+ V    G   V+ +CG               + + C +   K
Sbjct: 725 GDFGRLGHGDEETILQPKFVTHFLGYNVVQVSCG------------SRDAQTVCITDDDK 772

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           +++WGDGD G+LG G  E  L+P  V  L     C++ CG   TVALT TG V+T G   
Sbjct: 773 VWSWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGD 832

Query: 485 YGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           + +LG     + + P  VEG   K+ + +IA G  H   +T   EV++WG   +G+LG G
Sbjct: 833 FYRLGHGTDIHVRQPKLVEGLRGKHVI-DIAVGALHCLAVTQDGEVFSWGDNDHGQLGTG 891

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           +TD +  P+L+  L + ++K + CG+S + A
Sbjct: 892 ETDVKKVPNLITGLHNHRIKYVACGSSHSIA 922



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 174/349 (49%), Gaps = 23/349 (6%)

Query: 232  VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA 291
            +L   N+        + T    VF+ G    G+LG G    V+ P+L++++K+IN++ ++
Sbjct: 1474 LLKEHNVKIDCDTVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKIS 1533

Query: 292  C--GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
               G  H  A++  G++++WG G +   G LGHGN  +   PK++     G  ++++  G
Sbjct: 1534 VHSGGRHCLALSSDGEVFSWGEGED---GKLGHGNRQTSSQPKRIEF-FCGKIITNICAG 1589

Query: 349  PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
              H+A +   G+L+T+G G +G LGHGD      P++V++L+    +  ACG        
Sbjct: 1590 GSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACG-------- 1641

Query: 409  EVMVGSSSSSNCSSG--KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
                   + + C +    +++WGDGD G+LG G  +   VP  +  L      +V CG  
Sbjct: 1642 ----SGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQ 1697

Query: 467  LTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             ++ALT  G +YT G   Y +LG   + + + P  V     K  V  I+CG  H  V T 
Sbjct: 1698 FSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNK-IVTSISCGSLHCVVCTD 1756

Query: 526  RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              EVY WG    G+LG G    R  P+L   L +K++  I CG++ T A
Sbjct: 1757 EGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/331 (35%), Positives = 161/331 (48%), Gaps = 20/331 (6%)

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           KQ +VF WG     +LG    S V  P L D L ++  + +A G   T  +T  G +Y+ 
Sbjct: 556 KQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSC 615

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDG 367
           G S+  FG LG G+        +L   L  + V+ VS   G  H   +TS G  F++GDG
Sbjct: 616 GESS--FGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDG 673

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G LGHG+ +S S P  +++  G      +CG  H+AA+VE            +  L+T
Sbjct: 674 ENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVE------------NKYLYT 721

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVY 485
           WG GD GRLGHGD+E  L P  V   +  N  QVSCG   + TV +T    V++ G   +
Sbjct: 722 WGLGDFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDF 781

Query: 486 GQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           G+LG   +   L P  VE +L    + +I CG      LT    V+TWGKG   RLGHG 
Sbjct: 782 GKLGRGGSERCLIPVEVE-QLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGT 840

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                 P LVE L+ K V  I  G     A+
Sbjct: 841 DIHVRQPKLVEGLRGKHVIDIAVGALHCLAV 871



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 143/300 (47%), Gaps = 19/300 (6%)

Query: 224  PKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
            P+ +ES   ++++ I+   GGRH   ++  GEVFSWGE   G+LGHG     S PK I+ 
Sbjct: 1518 PRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEF 1577

Query: 282  LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
                 +  +  G  H+ A+ L+G++YTWG     +G LGHG+      PK++   L+   
Sbjct: 1578 FCGKIITNICAGGSHSAAIGLNGELYTWGKG--RYGRLGHGDSDDQLKPKQVEA-LQFFF 1634

Query: 342  VSSVSC--GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
            V  V+C  G   T  +T+   ++++GDG +G LG G       P  ++ L G   V+  C
Sbjct: 1635 VLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVEC 1694

Query: 400  GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
            G   + A+ +             G L+TWG GD  RLGHG +E    P  V AL      
Sbjct: 1695 GSQFSMALTKY------------GVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVT 1742

Query: 460  QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
             +SCG    V  T  G VY  G    GQLGD     +    +   L    ++ I+CG  H
Sbjct: 1743 SISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAH 1802



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 19/290 (6%)

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           GG H   +T  G  FSWG+   G+LGHG     S P LI+A     V  ++CG  H+ A+
Sbjct: 654 GGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAI 713

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSA 358
             +  +YTWG  +  FG LGHG+E ++  PK +   L G +V  VSCG     T  +T  
Sbjct: 714 VENKYLYTWGLGD--FGRLGHGDEETILQPKFVTHFL-GYNVVQVSCGSRDAQTVCITDD 770

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            +++++GDG FG LG G       P EV+ L+GL+  +  CG   T A+ +         
Sbjct: 771 DKVWSWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTK--------- 821

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
              +G ++TWG GD  RLGHG       P  V  L   +   ++ G    +A+T  G V+
Sbjct: 822 ---TGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVF 878

Query: 479 TMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           + G   +GQLG  + +  K+P  + G L  + ++ +ACG  H    T  T
Sbjct: 879 SWGDNDHGQLGTGETDVKKVPNLITG-LHNHRIKYVACGSSHSIAWTEIT 927



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 122/249 (48%), Gaps = 13/249 (5%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  +E+ V   V +I+CG  H+A + +   +++WG    GRLGHG +  +  PK +    
Sbjct: 689 PHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEETILQPKFVTHFL 748

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
             NV  V+CG      V ++ D   W   + +FG LG G      +P ++   L G+ + 
Sbjct: 749 GYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLIPVEVE-QLRGLQIC 807

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            + CG   T  +T  G ++T+G G F  LGHG  I V  P+ V+ L+G   +  A G  H
Sbjct: 808 KILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALH 867

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
             AV +             G++F+WGD D G+LG G+ + + VP  +  L       V+C
Sbjct: 868 CLAVTQ------------DGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVAC 915

Query: 464 GHSLTVALT 472
           G S ++A T
Sbjct: 916 GSSHSIAWT 924



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 132/285 (46%), Gaps = 23/285 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+VF WGE   DG LG G  ++ S          PK +E      + NI  GG H+A + 
Sbjct: 1548 GEVFSWGE-GEDGKLGHGNRQTSSQ---------PKRIEFFCGKIITNICAGGSHSAAIG 1597

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              GE+++WG+   GRLGHG   D   PK ++AL+   V  VACG      + ++ D   W
Sbjct: 1598 LNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVW 1657

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
               + ++G LG G      +P  +   L G  +  V CG   +  +T  G L+T+G G +
Sbjct: 1658 SWGDGDYGKLGRGGSDGCKVPMIIED-LSGKGIVKVECGSQFSMALTKYGVLYTWGKGDY 1716

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
              LGHG    V  P  V +L        +CG  H     +             G+++ WG
Sbjct: 1717 YRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTD------------EGEVYCWG 1764

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            D D G+LG G   AR  PT    L+     ++SCG + T+A +T+
Sbjct: 1765 DNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIAWSTS 1809



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 148/327 (45%), Gaps = 33/327 (10%)

Query: 313  NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL-FTFGDGTFGV 371
            N +F L       S  +  KL   L   H   + C    T  +T+ G L F  G G  G 
Sbjct: 1450 NLDFCLARVNGHFSAEMCVKLIDNLLKEHNVKIDCD---TVCITTDGALVFATGYGNNGQ 1506

Query: 372  LGHGDRISVSTPREVDSLK--GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG G   +V++PR ++S+K   ++ +    G  H  A+             S G++F+WG
Sbjct: 1507 LGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLAL------------SSDGEVFSWG 1554

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            +G+ G+LGHG+++    P  +          +  G S + A+   G +YT G   YG+LG
Sbjct: 1555 EGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLG 1614

Query: 490  DPKANGKL-PTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
               ++ +L P +VE  L   FV ++AC  GD     +T+   V++WG G  G+LG G +D
Sbjct: 1615 HGDSDDQLKPKQVEA-LQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSD 1673

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSGVDQSMCSG----CRIPFN- 597
                P ++E L  K +  + CG+ F+ A+     L+ W  G    +  G     R P   
Sbjct: 1674 GCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMV 1733

Query: 598  --FKRKRHNCYNCGLVYCHTCSSKKSV 622
                 K     +CG ++C  C+ +  V
Sbjct: 1734 TALFNKIVTSISCGSLHCVVCTDEGEV 1760



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 7/141 (4%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
            +P  VE    L +  I CG +    +TK G V++WG+    RLGHG D  V  PKL++ 
Sbjct: 793 LIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEG 852

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+  +V  +A G  H  AVT  G++++WG +  + G LG G      +P  + G L    
Sbjct: 853 LRGKHVIDIAVGALHCLAVTQDGEVFSWGDN--DHGQLGTGETDVKKVPNLITG-LHNHR 909

Query: 342 VSSVSCGPWH----TAVVTSA 358
           +  V+CG  H    T + TSA
Sbjct: 910 IKYVACGSSHSIAWTEITTSA 930



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 5/161 (3%)

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           +F WG  D+ +LG         PT    L       ++ G   T  +T  G +Y+ G   
Sbjct: 560 VFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESS 619

Query: 485 YGQLG--DPKANGKLPTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGRL 540
           +G+LG  D   N   P  V G L +  V +++   G  HV  LTS    ++WG G NG+L
Sbjct: 620 FGKLGIGDITGNVTSPRLVTG-LNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQL 678

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWV 581
           GHG+    + P L+EA   K V  I CG++ +AAI  +K++
Sbjct: 679 GHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYL 719



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 13/165 (7%)

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQVSC--GHSLTVALTTTGHV 477
           + GKL++ G+   G+LG GD    +  P  V  L +    +VS   G +  +ALT+ G  
Sbjct: 608 NKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLA 667

Query: 478 YTMGSPVYGQLGDPKANGKL-----PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
           ++ G    GQLG    +G L     P  +E  + K  V +I+CG  H A +     +YTW
Sbjct: 668 FSWGDGENGQLG----HGNLMSCSKPHLIEAFVGK-IVTDISCGSAHSAAIVENKYLYTW 722

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           G G  GRLGHGD +    P  V       V  + CG+     +C+
Sbjct: 723 GLGDFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCI 767


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/325 (38%), Positives = 173/325 (53%), Gaps = 18/325 (5%)

Query: 235 VQNIACGGRHAALVTKQG-EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           + ++ CG  H    ++ G EV+SWG    GRLGHG  SD+  P  I AL  I ++ +ACG
Sbjct: 60  IVSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 119

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           + H  AVT  G++ +WG  N N G LG G+     +P+K+    EGI +  V+ G  HTA
Sbjct: 120 DSHCLAVTXEGEVQSWG-RNQN-GQLGLGDTEDSLVPQKIQ-AFEGIRIKXVAAGAEHTA 176

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            VT  G L+ +G G +G LG GDR     P  V S  G +    ACG  HT +V      
Sbjct: 177 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISV------ 230

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                   SG L+T+G    G+LGHGD E  L+P  + AL      Q+S G   T ALT+
Sbjct: 231 ------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTS 284

Query: 474 TGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            G +Y  G   +GQ+G      +  P +V     +  V+ ++CG  H   +T R  V+ W
Sbjct: 285 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAW 343

Query: 533 GKGANGRLGHGDTDDRNFPSLVEAL 557
           G+G NG+LG G++ DRNFP ++EAL
Sbjct: 344 GRGTNGQLGIGESVDRNFPKIIEAL 368



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 179/369 (48%), Gaps = 22/369 (5%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H+  +     V SWG    G+LGHG   D   P  + AL    +  V CG  HT
Sbjct: 11  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 70

Query: 298 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + SG ++Y+WG  +  FG LGHGN   L+ P  +   L GI +  ++CG  H   VT
Sbjct: 71  VAYSQSGXEVYSWGWGD--FGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 127

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG GD      P+++ + +G+R    A G  HTAAV E       
Sbjct: 128 XEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTE------- 180

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 G L+ WG G  G LG GD+  RLVP  V +        V+CG   T++++ +G 
Sbjct: 181 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGA 235

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +YT G   YGQLG       L P ++E  L+ +F+ +I+ G  H   LTS  ++Y WG  
Sbjct: 236 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGARHTXALTSDGKLYGWGWN 294

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 591
             G++G G+  D+  P  V    D++V  + CG   T A+     +  W  G +  +  G
Sbjct: 295 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 354

Query: 592 CRIPFNFKR 600
             +  NF +
Sbjct: 355 ESVDRNFPK 363



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 171/381 (44%), Gaps = 49/381 (12%)

Query: 127 AAPPKVLLPSESACGSVNSLSSG-------GSDGRTGH-----------LKGLSGDTFRV 168
           A P KVL+ S  A  SV  LS         G DG+ GH           L  L G    V
Sbjct: 3   APPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQI-V 61

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
           S++     +   S      S  +V+ WG         G   R G   G   D F P  ++
Sbjct: 62  SVTCGADHTVAYS-----QSGXEVYSWGW--------GDFGRLGH--GNSSDLFTPLPIK 106

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           +   + ++ IACG  H   VT +GEV SWG    G+LG G   D   P+ I A + I ++
Sbjct: 107 ALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK 166

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            VA G  HT AVT  GD+Y WG     +G LG G+     +P+++     G   S V+CG
Sbjct: 167 XVAAGAEHTAAVTEDGDLYGWGWG--RYGNLGLGDRTDRLVPERVT-STGGEKXSXVACG 223

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             HT  V+ +G L+T+G   +G LGHGD      P ++++L      + + G  HT A+ 
Sbjct: 224 WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALT 283

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                       S GKL+ WG    G++G G+   +  P  V    +    QVSCG   T
Sbjct: 284 ------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 331

Query: 469 VALTTTGHVYTMGSPVYGQLG 489
           +A+T   +V+  G    GQLG
Sbjct: 332 LAVTERNNVFAWGRGTNGQLG 352


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 4001 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4047

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4048 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4107

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4108 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4164

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4165 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4213

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4214 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4273

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4274 LPEGRARNHNRPQQIP-LLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4332

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4333 HVREPTLVTGLQGKNVRQISAGRCHSAA 4360



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 4001 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4054

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4055 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4112 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4159

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4160 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4219

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4220 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4279

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4280 RNHNRPQQIPLLAGVIIEDVAVGAEHTLAL 4309



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4090 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4149

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4150 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4206

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P+++D L G+   + ACG   + A+         
Sbjct: 4207 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4266

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4326

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4327 GLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4362



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4285 PQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 4344

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4345 GKNVRQISAGRCHSAAWT 4362


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3935 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 3981

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 3982 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4041

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4042 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4098

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4099 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SVDGSMVWA 4147

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4148 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4207

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4208 LPEGRARNHNRPQQIP-VLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4266

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4267 HVREPTLVTGLQGKNVRQISAGRCHSAA 4294



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3935 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 3988

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 3989 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4045

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4046 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4093

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4094 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDY 4153

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4154 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4213

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4214 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4243



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 162/344 (47%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 3987 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4037

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 4038 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 4086

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV++ G M  
Sbjct: 4087 TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSM-V 4145

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 4146 WAFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4204

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+++  L G+     A G  HT A+             S+G ++ W
Sbjct: 4205 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAW 4252

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V  L   N  Q+S G   + A T
Sbjct: 4253 GSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4296



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3997 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4043

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4104 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------STDGSMVWA 4209

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4269

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4270 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4328

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4329 HVREPTLVTVLQGKNIRQISAGRCHSAA 4356



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  VE +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLVE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 161/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4050

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4051 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4155

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++T G  V+  G   Y
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDY 4215

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4275

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4276 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4305



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4146 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVST 4202

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4203 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4323 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKL++
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLVE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4281 PQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4340

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 4341 GKNIRQISAGRCHSAAWT 4358


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3997 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4043

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4104 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4209

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4269

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P +V   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4270 LPEGRARNHNRPQQVP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4328

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4329 HVREPTLVTVLQGKNIRQISAGRCHSAA 4356



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4050

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4051 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4155

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4215

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4275

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  V  L    ++ +  G   T A+
Sbjct: 4276 RNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 4305



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4146 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4202

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4203 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4322

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4323 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ V     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4281 PQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4340

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 4341 GKNIRQISAGRCHSAAWT 4358


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3998 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4105 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4270

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4271 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4329

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4330 HVREPTLVTVLQGKNVRQISAGRCHSAA 4357



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  V AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4051

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4052 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4156

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4217 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4277 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4306



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4147 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4324 GLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P +VEAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK VE+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4282 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4341

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4342 GKNVRQISAGRCHSAAWT 4359


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3998 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4105 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4270

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4271 LPEGRARNHNRPQQIP-VLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4329

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4330 HVREPTLVTGLQGKNVRQISAGRCHSAA 4357



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4051

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4052 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4156

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4277 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4306



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4147 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P+++D L G+   + ACG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.4 bits (111), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 4341

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4342 GKNVRQISAGRCHSAAWT 4359


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3998 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4105 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4270

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4271 LPEGRARNHNRPQQIP-VLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4329

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4330 HVREPTLVTGLQGKNVRQISAGRCHSAA 4357



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4051

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4052 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4156

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4277 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4306



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4147 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P+++D L G+   + ACG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.4 bits (111), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 4341

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4342 GKNVRQISAGRCHSAAWT 4359


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3997 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4043

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4104 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSVVWA 4209

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4269

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4270 LPEGRARNHNRPQQIP-VLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4328

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4329 HVREPTLVTGLQGKNVRQISAGRCHSAA 4356



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4050

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4051 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4155

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV-YTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G V +  G   Y
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDY 4215

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4275

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4276 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4305



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4146 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4202

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4203 DGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4323 GLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.4 bits (111), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4281 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 4340

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4341 GKNVRQISAGRCHSAAWT 4358


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/415 (33%), Positives = 210/415 (50%), Gaps = 36/415 (8%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            V++WG    D +        G   G K+   +P   E    L   +IA G +   +V+++
Sbjct: 2591 VYVWGLNDKDQL--------GGLKGSKIK--LPIYSEVLSKLKPIHIAGGSKTLFIVSQE 2640

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ GE   GRLG G D++V  PK I  L    ++ VA   G  H  A+T  G +++W
Sbjct: 2641 GKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 2700

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN +SL  PK +   L+   +  ++CG  H+A + S G+L+T+G G 
Sbjct: 2701 GEGED---GKLGHGNCISLDKPKLIE-ILKSKRIRDIACGSGHSAAIASNGELYTWGLGE 2756

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD I+ + P+ V +L G R V+ ACG             + + +  + G +++W
Sbjct: 2757 YGRLGHGDTITQTRPKLVQALVGQRVVQVACG----------SRDAQTMALTTDGCVYSW 2806

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +    P  V  L      QV CG   ++ALT  G V+T G   Y +L
Sbjct: 2807 GDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRL 2866

Query: 489  GDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G    +  + PT VEG   K  +  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 2867 GHGNDHHVRKPTLVEGLRGKKII-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSV 2925

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKR 602
               PSLV  L+D +V  + CG+S + A     WV  VDQ   +G + P  F   R
Sbjct: 2926 NRKPSLVHDLEDARVNRVSCGSSHSIA-----WVL-VDQP-SNGNQDPVTFPTVR 2973



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 172/334 (51%), Gaps = 35/334 (10%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT-WGG 311
           EV +WG   G + G+G     S P   D +  + ++ + C E     ++L+G+ Y  + G
Sbjct: 79  EVLAWG---GVKFGNG-----STPFYCDPIAGLGIKQLCCTERSLMILSLNGNAYNMYHG 130

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           S   + L  HG           + P+  I  +S + G  H   +T  G ++++G+G  G 
Sbjct: 131 SETQYPLRVHGFS---------DKPITMI--ASHADGK-HYLALTQDGCVYSWGNGDGGR 178

Query: 372 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           LGHGD +S   P+ ++SL     V  ACG  ++AA+             +SG+L+TWG G
Sbjct: 179 LGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAAL------------SASGELYTWGRG 226

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLG 489
           + GRLGHG+ +  L PT V  L       V+CG   S T+ +T +G V++ G   YG+LG
Sbjct: 227 NYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLG 286

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
               +G    ++  KL    V ++ CG    A LT+  EVYTWGKG   RLGHG  +   
Sbjct: 287 RGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVR 346

Query: 550 FPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
           +P ++E+L+DK++K +  GT+   A+   ++V G
Sbjct: 347 YPKVIESLRDKKIKDLSVGTTHILALTEDQFVYG 380



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 165/332 (49%), Gaps = 23/332 (6%)

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +Q  V+ WG     +LG    S +  P   + L  +    +A G      V+  G +Y  
Sbjct: 2587 QQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYAC 2646

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEG---IHVSSVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G++ ++  PK +  P      I   +V  G  H   +T  G++F++G
Sbjct: 2647 GEGTN---GRLGLGDDNNVCEPKAI--PFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 2701

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+ IS+  P+ ++ LK  R    ACG  H+AA+             S+G+L
Sbjct: 2702 EGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIA------------SNGEL 2749

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +  P  V ALV     QV+CG   + T+ALTT G VY+ G  
Sbjct: 2750 YTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDG 2809

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
             +G+LG   ++G        +L    V ++ CG      LT   EV+TWGKG   RLGHG
Sbjct: 2810 DFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 2869

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +      P+LVE L+ K++  +  G     A+
Sbjct: 2870 NDHHVRKPTLVEGLRGKKIIHVAVGALHCLAV 2901



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 184/378 (48%), Gaps = 34/378 (8%)

Query: 213 SYAGVKM-DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS 271
           ++ GVK  +   P   +    L ++ + C  R   +++  G  ++        + HG  S
Sbjct: 82  AWGGVKFGNGSTPFYCDPIAGLGIKQLCCTERSLMILSLNGNAYN--------MYHG--S 131

Query: 272 DVSHPKLIDALKNINVELVAC---GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLW 328
           +  +P  +    +  + ++A    G+H+  A+T  G +Y+WG  N + G LGHG+ +S  
Sbjct: 132 ETQYPLRVHGFSDKPITMIASHADGKHY-LALTQDGCVYSWG--NGDGGRLGHGDTVSYD 188

Query: 329 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS 388
            PK +   L+  ++  ++CG  ++A ++++G+L+T+G G +G LGHG+   V TP  V +
Sbjct: 189 EPKLIESLLDK-NIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTT 247

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLV 446
           LKG   V  ACG               S + C  +SG +F+WGDGD G+LG G  +    
Sbjct: 248 LKGHTVVHVACG------------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKT 295

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKL 505
           P  V  L++ N  +V CG   + ALT  G VYT G     +LG   + + + P  +E  L
Sbjct: 296 PKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIE-SL 354

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
               +++++ G  H+  LT    VY WG+   G++        + P+L   L  K V  +
Sbjct: 355 RDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQIDPTLGPVVSEPTLCPTLSSKTVIGL 414

Query: 566 VCGTSFTAAICLHKWVSG 583
             G + + A C+  W  G
Sbjct: 415 ASGPTQSFAWCMSAWSGG 432



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 98/214 (45%), Gaps = 29/214 (13%)

Query: 150  GSDGRTGHLKGLSGDTF---RVSLSSAVSSS---SQGSGHDDGDSL-----GDVFIWGEC 198
            G  GR GH     GDT    R  L  A+          G  D  ++     G V+ WG+ 
Sbjct: 2755 GEYGRLGH-----GDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGD- 2808

Query: 199  TGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 258
             GD    G + R GS        + P AV+    L V  + CG + +  +TK GEV++WG
Sbjct: 2809 -GDF---GKLGRGGSDG-----CYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWG 2859

Query: 259  EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGL 318
            +    RLGHG D  V  P L++ L+   +  VA G  H  AVT +G +Y WG +  + G 
Sbjct: 2860 KGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDN--DHGQ 2917

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
             G+G   S+     L   LE   V+ VSCG  H+
Sbjct: 2918 QGNG-ATSVNRKPSLVHDLEDARVNRVSCGSSHS 2950


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3993 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4039

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4040 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4099

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4100 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4156

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4157 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4205

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4206 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4265

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4266 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4324

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4325 HVREPTLVTVLQGKNVRQISAGRCHSAA 4352



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3993 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4046

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4047 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4103

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4104 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4151

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4152 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4211

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4212 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4271

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4272 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4301



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4082 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4141

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4142 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4198

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4199 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4258

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4259 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4318

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4319 GLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 156/309 (50%), Gaps = 40/309 (12%)

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T  V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V++
Sbjct: 365 TPIVSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVIS 419

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVM 411
           + G +   G G++G LG GD  + ST +++      S+K + + + + G  HT A     
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT--- 474

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVA 470
                    + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A
Sbjct: 475 ---------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RT 527
           +T  G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT 582

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
            V+++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G
Sbjct: 583 -VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641

Query: 584 VDQSMCSGC 592
                C GC
Sbjct: 642 A----CLGC 646



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4277 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4336

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4337 GKNVRQISAGRCHSAAWT 4354


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3996 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4042

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4103 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4208

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4268

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4269 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4327

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4328 HVREPTLVTVLQGKNVRQISAGRCHSAA 4355



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3996 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4049

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4050 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4154

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4214

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4274

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4275 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4145 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4201

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4202 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4357



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4339

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4340 GKNVRQISAGRCHSAAWT 4357


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 199/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DVF+WG             R G  A    +  VP    S      Q + CG     ++  
Sbjct: 3983 DVFLWGA-----------GRHGQLAEAGRNILVPTLAPS--FSQAQQVVCGQNCTFVIQA 4029

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE--LVACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V   + +CG + H+ A+T SG+++
Sbjct: 4030 NGTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVF 4089

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LF+FG+G
Sbjct: 4090 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFSFGNG 4146

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4147 DYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAV-----------SADGMTVWA 4195

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  G+VYT G      
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIG 4255

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P +V   LT  F+E++A G  H   L+S  +VY WG  + G+LG G T+
Sbjct: 4256 LPEGRARNHNRPQQVPA-LTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTN 4314

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+L+ AL+ K ++ I  G   +AA
Sbjct: 4315 HVREPTLISALQGKNIQQISAGRCHSAA 4342



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 183/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 368 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVISS 415

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    +  ++ V+     + HT A T  G+++
Sbjct: 416 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVF 475

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A V+  G+L+T+G+G
Sbjct: 476 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 533

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 534 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 580

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  V AL      +V  G   ++ALT+TG VY  G      
Sbjct: 581 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 640

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    V +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 641 CGSSEATALRPKLIE-ELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 699

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 700 PITKPKKVIGLDGVAIQQISAGTSHSLA 727



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 151/290 (52%), Gaps = 19/290 (6%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4072 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4131

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++++G  N ++G LG GN  +  LP++++  LEG  V  V+CG  HT  V++
Sbjct: 4132 AVVTSDGKLFSFG--NGDYGRLGLGNTSNKKLPERVSA-LEGHQVGQVACGLNHTLAVSA 4188

Query: 358  AGQ-LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G  ++ FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+ +       
Sbjct: 4189 DGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK------- 4241

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                  G ++T+G      L  G       P  V AL       V+ G   T+ L++TG 
Sbjct: 4242 -----DGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGD 4296

Query: 477  VYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            VY  GS   GQLG    N  + PT +     KN +++I+ G  H A  T+
Sbjct: 4297 VYAWGSNSEGQLGLGHTNHVREPTLISALQGKN-IQQISAGRCHSAAWTA 4345



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 161/327 (49%), Gaps = 22/327 (6%)

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
            +VF WG    G+L      ++  P L  +      + V CG++ T  +  +G +   G  
Sbjct: 3983 DVFLWGAGRHGQLAEA-GRNILVPTLAPSFSQ--AQQVVCGQNCTFVIQANGTVSACGEG 4039

Query: 313  NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGDGTF 369
            +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GDG +
Sbjct: 4040 S--YGRLGQGNSDDLHVLTVISA-LQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDY 4096

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF++G
Sbjct: 4097 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFSFG 4144

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGSPVYGQL 488
            +GD GRLG G+   + +P  V+AL      QV+CG + T+A++  G  V+  G   YG+L
Sbjct: 4145 NGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKL 4204

Query: 489  GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
            G   +  K   +    L    ++++ACG      LT    VYT+G+     L  G   + 
Sbjct: 4205 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNH 4264

Query: 549  NFPSLVEALKDKQVKSIVCGTSFTAAI 575
            N P  V AL    ++ +  G   T  +
Sbjct: 4265 NRPQQVPALTGVFIEDVAVGAEHTLTL 4291



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 155/304 (50%), Gaps = 36/304 (11%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V++S G
Sbjct: 363 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISSDG 417

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVGSSS 416
            +   G G++G LG GD  + ST +++  +  + ++ V ++ G   HT A          
Sbjct: 418 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFT-------- 469

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTTTG 475
               S G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A++  G
Sbjct: 470 ----SEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDG 525

Query: 476 HVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVYTW 532
            +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+++
Sbjct: 526 ELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VWSF 581

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSM 588
           G G NG+LGHGDT+    P +VEAL+   ++ +  G+  + A+     ++ W  G     
Sbjct: 582 GGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA---- 637

Query: 589 CSGC 592
           C GC
Sbjct: 638 CLGC 641



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 44/78 (56%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ V +   + ++++A G  H   ++  G+V++WG    G+LG G  + V  P LI AL+
Sbjct: 4267 PQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLISALQ 4326

Query: 284  NINVELVACGEHHTCAVT 301
              N++ ++ G  H+ A T
Sbjct: 4327 GKNIQQISAGRCHSAAWT 4344


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/388 (35%), Positives = 200/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3995 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4041

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4042 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4101

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4102 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4158

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV      SS  S      ++ 
Sbjct: 4159 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV------SSDGS-----MVWA 4207

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4208 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4267

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4268 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4326

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4327 HVREPTLVTVLQGKNVRQISAGRCHSAA 4354



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 183/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + ++  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 161/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3995 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4048

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4049 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4105

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4106 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4153

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A+++ G  V+  G   Y
Sbjct: 4154 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDY 4213

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4214 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4273

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4274 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4303



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4084 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4143

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V+S
Sbjct: 4144 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSS 4200

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4201 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4260

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4261 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4320

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4321 GLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4356



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 155/304 (50%), Gaps = 36/304 (11%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVGSSS 416
            +   G G++G LG GD  + ST +++  +  + +R V ++ G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFT-------- 474

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTTTG 475
               + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T  G
Sbjct: 475 ----TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDG 530

Query: 476 HVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVYTW 532
            +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+++
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VWSF 586

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSM 588
           G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G     
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA---- 642

Query: 589 CSGC 592
           C GC
Sbjct: 643 CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4279 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4338

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4339 GKNVRQISAGRCHSAAWT 4356


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  191 bits (486), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 4007 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4053

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4054 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4113

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4114 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4170

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4171 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4219

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4220 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4279

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4280 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4338

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4339 HVREPTLVTVLQGKNVRQISAGRCHSAA 4366



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  V AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 4007 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4060

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4061 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4117

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4118 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4165

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4166 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4225

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4226 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4285

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4286 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4315



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4096 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4155

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4156 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4212

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4213 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4272

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4333 GLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4368



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P +VEAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK VE+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4291 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4350

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 4351 GKNVRQISAGRCHSAAWT 4368


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  191 bits (486), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 2451 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 2497

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 2498 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2557

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 2558 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2614

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 2615 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 2663

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 2664 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 2723

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 2724 LPEGRARNHNRPQQIP-VLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 2782

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 2783 HVREPTLVTGLQGKNVRQISAGRCHSAA 2810



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 2451 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 2504

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 2505 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2561

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 2562 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 2609

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 2610 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 2669

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 2670 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 2729

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 2730 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 2759



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 161/344 (46%), Gaps = 44/344 (12%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 2503 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 2553

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    +V  ++CG +H+A+V
Sbjct: 2554 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEVVQMSCGFKHSAVV 2602

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV+  G M  
Sbjct: 2603 TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-V 2661

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 2662 WAFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 2720

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+++  L G+     A G  HT A+             S+G ++ W
Sbjct: 2721 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAW 2768

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V  L   N  Q+S G   + A T
Sbjct: 2769 GSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 2812


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 200/389 (51%), Gaps = 32/389 (8%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2732 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2781

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G++++ GE   GRLG G+ S  +  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 2782 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 2841

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+++G G 
Sbjct: 2842 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKAKRIRDIACGSSHSAAITSSGELYSWGLGE 2898

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSSSSNCSSGKLF 426
            +G LGHGD  +   P+ V  L G R ++ ACG     T A+ +             G +F
Sbjct: 2899 YGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD------------EGLVF 2946

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            +WGDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y 
Sbjct: 2947 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3006

Query: 487  QLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            +LG     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T
Sbjct: 3007 RLGHGTDVHVRKPQMVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3065

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                 P+LV+ L+ +++  + CG+S + A
Sbjct: 3066 TVNRKPTLVQGLEGQKITRVACGSSHSVA 3094



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 189/393 (48%), Gaps = 39/393 (9%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3759 IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3818

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ +  VA   G  H  A++  G++Y+WG      G L
Sbjct: 3819 GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 3876

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L G+ V  ++ G  H+A +T++G+LFT+G G +G LGHGD   
Sbjct: 3877 GHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSED 3935

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ VD+L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 3936 QLKPKLVDALQGHRVIDVACG------------SGDAQTLCLTDDDMVWSWGDGDYGKLG 3983

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +    P  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 3984 RGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4043

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSR-----------------TEVYTWGKGANGR 539
             P +V+G   K  +  IA G  H    T                    EVYTWG    G+
Sbjct: 4044 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQ 4102

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
            LG G T+    P LV AL+ K++  + CG++ T
Sbjct: 4103 LGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4135



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G ++  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2782 GKIYACGEAT-NGRLGLGL-SSGTIP-------IPRQITALSNYVVKKVAVHSGGRHAMA 2832

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 2833 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELY 2892

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            +WG     +G LGHG+  +   P KL   L G  V  V+CG     T  +T  G +F++G
Sbjct: 2893 SWGLG--EYGRLGHGDNTTQLRP-KLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 2949

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 2950 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 2997

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T TG VY  G   +
Sbjct: 2998 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3057

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3058 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3097



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 163/332 (49%), Gaps = 33/332 (9%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V +IA GG H+A 
Sbjct: 3861 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGVEVVDIAAGGAHSAC 3910

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  GE+F+WG+   GRLGHG   D   PKL+DAL+   V  VACG      + L+ D  
Sbjct: 3911 ITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDM 3970

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G       P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 3971 VWSWGDGDYGKLGRGGSDGCKTPMKIDS-LTGLGVIKVECGSQFSVALTKSGAVYTWGKG 4029

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE-----VMVGSSSSSNCSS 422
             +  LGHG    V  PR+V  L+G + +  A G  H     E     V        +   
Sbjct: 4030 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGL 4089

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
            G+++TWGD D G+LG G   A   P  VAAL      +V+CG + T++ +T+        
Sbjct: 4090 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLSWSTS-------- 4141

Query: 483  PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA 514
                    P   GKLP +V   +  N ++EI+
Sbjct: 4142 -------KPTNAGKLPAQV--PMEYNHLQEIS 4164



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 167/334 (50%), Gaps = 24/334 (7%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y 
Sbjct: 2727 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 2786

Query: 309  WG-GSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTF 364
             G  +N   GL L  G   ++ +P+++   L    V  V+   G  H   +T  G++F++
Sbjct: 2787 CGEATNGRLGLGLSSG---TIPIPRQITA-LSNYVVKKVAVHSGGRHAMALTVDGKVFSW 2842

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+
Sbjct: 2843 GEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAIT------------SSGE 2890

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGS 482
            L++WG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G 
Sbjct: 2891 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 2950

Query: 483  PVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLG
Sbjct: 2951 GDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3009

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            HG       P +VE L+ K++  +  G     A+
Sbjct: 3010 HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3043



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 158/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3816

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3817 GAGGRLGIGGTESVST--PTLLES-IQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 3873

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A +             +SG+LFTWG
Sbjct: 3874 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT------------ASGELFTWG 3921

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGHGD E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 3922 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 3981

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 3982 LGRGGSDGCKTPMKID-SLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4040

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4041 HVRRPRQVQGLQGKKVIAIATGS 4063



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 144/282 (51%), Gaps = 23/282 (8%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI----NVELVACGEHHT 297
           G+H   ++  GEVFSWG   GGRLGHG  + +  P +I A        +V  +ACG  ++
Sbjct: 467 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYS 526

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVV 355
            A+T+ G++YTWG    N+G LGHG+      P  +   L+G+ V  V+CG     T  V
Sbjct: 527 AAITVDGELYTWG--RGNYGRLGHGSSEDQTTPMLVTA-LKGLKVVDVACGSGDAQTLAV 583

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           T  GQ++++GDG +G LG G      TP+ V+ L+ L  V+  CG   + A+ +      
Sbjct: 584 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK------ 637

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                  G+++TWG GD  RLGHG  E    P  +  L       V+ G +  +ALT  G
Sbjct: 638 ------DGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDG 691

Query: 476 HVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACG 516
            V++ GS    Q  D   +N K P  + G  +K+ V  I+CG
Sbjct: 692 EVHSWGSNDKLQHFDTLFSNKKQPKALPGLNSKHIV-GISCG 732



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 161/341 (47%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG      LG  + ++V+ P    +L ++ V  + C E     ++ SG +YT    
Sbjct: 387 EVIAWG-----LLGWKLYANVNGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYT---- 437

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDGTFG 370
                     N  S  L   L   L    +  ++  P   H   ++S G++F++G G  G
Sbjct: 438 ---------QNYKSTTLAPMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGG 488

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD   +  P  + +  G +     V  ACG  ++AA+               G+L+
Sbjct: 489 RLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAIT------------VDGELY 536

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E +  P  V AL       V+CG   + T+A+T  G V++ G   
Sbjct: 537 TWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGD 596

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  VE KL    + ++ CG      LT   +VYTWGKG N RLGHG
Sbjct: 597 YGKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 655

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   FP L++ L+ K+V  +  G++   A+     +H W
Sbjct: 656 TDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSW 696



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 142/296 (47%), Gaps = 37/296 (12%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAG--VKMDSFVPKAVESAVV 232
           + H DG       S G+VF WG C   G LG   H   +Y      + +F  K     VV
Sbjct: 462 AAHPDGQHYLALSSNGEVFSWG-CGDGGRLG---HGDTTYLEEPTMIAAFNGKQAGKHVV 517

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
               +IACG  ++A +T  GE+++WG    GRLGHG   D + P L+ ALK + V  VAC
Sbjct: 518 ----HIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVAC 573

Query: 293 --GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
             G+  T AVT +G +++WG  + ++G LG G       P KL   L+ + +  V CG  
Sbjct: 574 GSGDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTP-KLVEKLQDLDIVKVCCGSQ 630

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            +  +T  GQ++T+G G    LGHG    V  P+ +D+L+G + V  A G  H  A+ + 
Sbjct: 631 FSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTD- 689

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCG 464
                       G++ +WG  D  +L H D     +  P  +  L   +   +SCG
Sbjct: 690 -----------DGEVHSWGSND--KLQHFDTLFSNKKQPKALPGLNSKHIVGISCG 732



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 2845 GDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWG--LGEYGRL 2902

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 2903 GHGDNTT---------QLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2953

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 2954 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3011

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             ++ +  P+ + G L G  +  V+ G  H   VT  GQ++ +GD   G  G+G       
Sbjct: 3012 TDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3070

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3071 PTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPS 3104



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 23/279 (8%)

Query: 303  SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            SG +Y WG ++   G LG   G ++ +  P +    L  + +     G      VT+ G+
Sbjct: 3756 SGTIYGWGHNH--RGQLGGIEGAKVKVPTPTEALATLRPVQLIG---GEQTLFAVTADGK 3810

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGSSSSS 418
            L+  G G  G LG G   SVSTP  ++S++   +R V    G  H  A+           
Sbjct: 3811 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLAL----------- 3859

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
              S G++++WG+ + G+LGHG++     P  + +L       ++ G + +  +T +G ++
Sbjct: 3860 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELF 3918

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 536
            T G   YG+LG   +  +L  ++   L  + V ++ACG  D     LT    V++WG G 
Sbjct: 3919 TWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 3978

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G+LG G +D    P  +++L    V  + CG+ F+ A+
Sbjct: 3979 YGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVAL 4017



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 105/212 (49%), Gaps = 31/212 (14%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSA-----VSSSSQGSGHDDGDSL-----GDVFIWGECT 199
           G+ GR GH  G S D     L +A     V   + GSG  D  +L     G V+ WG+  
Sbjct: 541 GNYGRLGH--GSSEDQTTPMLVTALKGLKVVDVACGSG--DAQTLAVTENGQVWSWGD-- 594

Query: 200 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
           GD    G + R GS  G K     PK VE    LD+  + CG + +  +TK G+V++WG+
Sbjct: 595 GDY---GKLGRGGS-DGCK----TPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGK 646

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN--CNFG 317
               RLGHG D  V  PKL+D L+   V  VA G  H  A+T  G++++WG ++   +F 
Sbjct: 647 GDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFD 706

Query: 318 LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
            L    +     PK L G L   H+  +SCGP
Sbjct: 707 TLFSNKKQ----PKALPG-LNSKHIVGISCGP 733



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2765 VVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVH 2824

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G    +ALT  G V++ G    G+LG   + N   P  +E  L    + +IACG  H A
Sbjct: 2825 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKAKRIRDIACGSSHSA 2883

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+Y+WG G  GRLGHGD   +  P LV+ L   +V  + CG+     + L    
Sbjct: 2884 AITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEG 2943

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 2944 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 2972



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 111/224 (49%), Gaps = 18/224 (8%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            +G ++ +G    G LG   G ++ V TP E  +L  LR V+   G     AV        
Sbjct: 3756 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTE--ALATLRPVQLIGGEQTLFAVT------- 3806

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                 + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++
Sbjct: 3807 -----ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS 3861

Query: 474  TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
             G VY+ G    G+LG    +     RV   L    V +IA G  H A +T+  E++TWG
Sbjct: 3862 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG 3921

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            KG  GRLGHGD++D+  P LV+AL+  +V  + CG+     +CL
Sbjct: 3922 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 3965


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3965 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4011

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4012 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4071

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4072 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4128

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4129 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4177

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4178 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4237

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4238 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4296

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4297 HVREPTLVTVLQGKNIRQISAGRCHSAA 4324



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3965 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4018

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4019 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4075

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4076 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4123

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4124 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4183

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4184 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4243

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4244 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4273



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4054 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4113

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4114 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4170

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4171 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4230

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4231 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4290

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4291 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4326



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4249 PQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4308

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 4309 GKNIRQISAGRCHSAAWT 4326


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3998 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4105 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4270

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4271 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4329

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4330 HVREPTLVTVLQGKNIRQISAGRCHSAA 4357



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 182/388 (46%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKMALS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  V AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD     L    EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 164/337 (48%), Gaps = 27/337 (8%)

Query: 245 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
           A +V++  EV+ WG     +L  G    +  PK+  AL   + + +  G++ T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKM--ALSFSDAQTIEAGQYCTFVISTDG 422

Query: 305 DMYTWG-GSNCNFGLLGHGNEMSLWLPKKLN-GPLEGI-HVSSVSCGPWHTAVVTSAGQL 361
            +   G GS    GL    N+ +L   KKL   P   I  VSS      HT   T+ G++
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTL---KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEV 479

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           F++GDG +G LGHG+  +   P+ +   L+G   V  + G  H+AAV E           
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE----------- 528

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYT 479
             G+L+TWG+GD GRLGHGD  +R +PT V  +   N  +VSCG S T+AL+  G  V++
Sbjct: 529 -DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 480 MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            G    G+LG    N     +V   L   F+ ++  G      LTS  +VY WG GA   
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC-- 643

Query: 540 LGHGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAI 575
           LG G ++     P L+E L   ++  I  G S   A+
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSXCLAL 680



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4051

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4052 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4156

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4217 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4277 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4306



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4147 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4324 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4359



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK     L      ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKM---ALSFSDAQTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P +VEAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 66/220 (30%)

Query: 190 GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           G+++ WGE  GD G LG G   S +         +P  V+   + +V  ++CG  H   +
Sbjct: 530 GELYTWGE--GDFGRLGHGDSNSRN---------IPTLVKD--ISNVGEVSCGSSHTIAL 576

Query: 249 TKQGE-VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +K G  V+S+G    G+LGHG  + V  PK+++AL+ + +  V  G   + A+T +G +Y
Sbjct: 577 SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVY 636

Query: 308 TWGGSNC---------------------------NFG-----LLGHGNEMSLW------- 328
            WG   C                           + G      L H NE+  W       
Sbjct: 637 AWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQ 696

Query: 329 -----------LPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
                       PKK++G L+GI +  +S G  H+   T+
Sbjct: 697 CGQGNSTGPITKPKKVSG-LDGIAIQQISAGTSHSLAWTA 735



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4282 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4341

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 4342 GKNIRQISAGRCHSAAWT 4359


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 1578 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 1624

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 1625 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1684

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 1685 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 1741

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 1742 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 1790

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 1791 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 1850

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 1851 LPEGRARNHNRPQQIP-VLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 1909

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 1910 HVREPTLVTGLQGKNVRQISAGRCHSAA 1937



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 1578 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 1631

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 1632 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 1688

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 1689 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 1736

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 1737 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 1796

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 1797 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 1856

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 1857 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 1886



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 1667 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 1726

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 1727 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 1783

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P+++D L G+   + ACG   + A+         
Sbjct: 1784 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 1843

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 1844 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 1903

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 1904 GLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 1939



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 1862 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 1921

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 1922 GKNVRQISAGRCHSAAWT 1939


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/310 (36%), Positives = 171/310 (55%), Gaps = 23/310 (7%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV+SWG+ + G+LGHG +     P+L+ A    NV  V+CG  HT  +  +G+++T+G  
Sbjct: 7   EVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFG-- 64

Query: 313 NCNFGLLGHGNEMSLWLPK-KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
             NFG LG G  ++  +    L   L+G HV  V+CG  HT  +   GQL+T+G G +G 
Sbjct: 65  RGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGR 124

Query: 372 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           LGHGD +  ++P+ V+SL+G      A G +H++ ++E             G L TWG G
Sbjct: 125 LGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIE------------GGNLLTWGGG 172

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-- 489
             G+LGHGD+  R  P  V  + +    +V+CG   T+ LT +  V+T GS  +G+LG  
Sbjct: 173 YFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIG 232

Query: 490 --DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
             +  A   + T ++G      V  I+ G +H A LTS   +YTWG G  G+LGHGD + 
Sbjct: 233 DEEKHAEPIMITALQGV----GVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENS 288

Query: 548 RNFPSLVEAL 557
           +N P +VE +
Sbjct: 289 QNIPVVVEVI 298



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/282 (36%), Positives = 158/282 (56%), Gaps = 18/282 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           P+ V + +  +V+ ++CG +H A++ + GEVF++G    G+LG G  V ++VS P L+ A
Sbjct: 30  PRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSA 89

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+  +V+ VACG HHTCA+  +G +YTWG  +  +G LGHG+E+    PK +   L+G  
Sbjct: 90  LQGKHVKQVACGWHHTCALIDNGQLYTWG--SGEYGRLGHGDEVRQASPKLVE-SLQGKE 146

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V+ V+ G +H++V+   G L T+G G FG LGHGD     TP+ V  ++       ACG 
Sbjct: 147 VTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGT 206

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HT  + +            S +++TWG G+ G+LG GD+E    P  + AL       +
Sbjct: 207 HHTLMLTQ------------SQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHI 254

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVE 502
           S G   + ALT+ G +YT G    GQLG    N + +P  VE
Sbjct: 255 STGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNIPVVVE 296



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 152/286 (53%), Gaps = 23/286 (8%)

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           ++Y+WG      G LGHG+E +   P+ +   L G +V  VSCG  HTA++   G++FTF
Sbjct: 7   EVYSWG--QGVLGQLGHGDEKTQRQPRLVVAFL-GFNVRQVSCGNQHTAILMENGEVFTF 63

Query: 365 GDGTFGVLGHGDRIS--VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           G G FG LG G  ++  VSTP  V +L+G    + ACG  HT A+++            +
Sbjct: 64  GRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALID------------N 111

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           G+L+TWG G+ GRLGHGD+  +  P  V +L       V+ G   +  +   G++ T G 
Sbjct: 112 GQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGG 171

Query: 483 PVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
             +GQLG   + + K P  V+G + +    E+ACG +H  +LT   EV+TWG G  G+LG
Sbjct: 172 GYFGQLGHGDETDRKTPKMVKG-VQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLG 230

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 583
            GD +    P ++ AL+   V  I  G   +AA+     L+ W  G
Sbjct: 231 IGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGG 276



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 138/264 (52%), Gaps = 23/264 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+VF +G         G   + G  A V  +   P  V +     V+ +ACG  H   + 
Sbjct: 58  GEVFTFGR--------GNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALI 109

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G++++WG    GRLGHG +   + PKL+++L+   V  VA G  H+  +   G++ TW
Sbjct: 110 DNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTW 169

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           GG    FG LGHG+E     PK + G  + I    V+CG  HT ++T + +++T+G G F
Sbjct: 170 GGG--YFGQLGHGDETDRKTPKMVKGVQQCI-AHEVACGTHHTLMLTQSQEVWTWGSGEF 226

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LG GD    + P  + +L+G+  +  + G +H+AA+             S G L+TWG
Sbjct: 227 GKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALT------------SEGVLYTWG 274

Query: 430 DGDRGRLGHGDKEARLVPTCVAAL 453
            GD+G+LGHGD+ ++ +P  V  +
Sbjct: 275 GGDKGQLGHGDENSQNIPVVVEVI 298



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 29/49 (59%)

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +EVY+WG+G  G+LGHGD   +  P LV A     V+ + CG   TA +
Sbjct: 6   SEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAIL 54


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 200/389 (51%), Gaps = 32/389 (8%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 1770 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTAE 1819

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  +  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 1820 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFS 1879

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+++G G 
Sbjct: 1880 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 1936

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSSSSNCSSGKLF 426
            +G LGHGD  +   P+ V  L G R V+ ACG     T A+ +             G +F
Sbjct: 1937 YGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTD------------EGMVF 1984

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            +WGDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y 
Sbjct: 1985 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 2044

Query: 487  QLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            +LG     + + P  VEG   K  V  +A G  H   +T   +V+ WG   +G+ G+G T
Sbjct: 2045 RLGHGTDVHVRKPQMVEGLRGKKIVH-VAVGALHCLAVTETGQVFAWGDNDHGQQGNGTT 2103

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                 P+LV+ L+ +++  + CG+S + A
Sbjct: 2104 TVNRKPTLVQGLEGQKITRVACGSSHSVA 2132



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/378 (32%), Positives = 191/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 2765 IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 2824

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ +  VA   G  H  A++  G++Y+WG      G L
Sbjct: 2825 GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWG--EAEDGKL 2882

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L G+ V  ++ G  H+A +T++G+L+T+G G +G LGHGD   
Sbjct: 2883 GHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSED 2941

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 2942 QLKPKLVEALQGHRVIDVACG------------SGDAQTLCLTDDDMVWSWGDGDYGKLG 2989

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 2990 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3049

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 3050 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 3108

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 3109 LQGKKINRVACGSAHTLA 3126



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 1820 GKVYACGEAT-NGRLGLGLS-SGTIP-------IPRQISALSNYVVKKVAVHSGGRHAMA 1870

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 1871 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 1930

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            +WG     +G LGHG+  +   P KL   L G  V  V+CG     T  +T  G +F++G
Sbjct: 1931 SWGLG--EYGRLGHGDNTTQLRP-KLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWG 1987

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 1988 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 2035

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T TG V+  G   +
Sbjct: 2036 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDH 2095

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 2096 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2135



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 162/327 (49%), Gaps = 40/327 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+++ WGE   DG LG G +RS            P+ +ES   ++V +IA GG H+A 
Sbjct: 2867 SEGELYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGVEVVDIAAGGAHSAC 2916

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  GE+++WG+   GRLGHG   D   PKL++AL+   V  VACG      + L+ D  
Sbjct: 2917 ITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDM 2976

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 2977 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3035

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 3036 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 3083

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 3084 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 3130

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEIA 514
               P   GKLP +V   +  N ++EIA
Sbjct: 3131 --KPTNAGKLPAQV--PMEYNHLQEIA 3153



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 167/334 (50%), Gaps = 24/334 (7%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT  G +Y 
Sbjct: 1765 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYA 1824

Query: 309  WG-GSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTF 364
             G  +N   GL L  G   ++ +P++++  L    V  V+   G  H   +T  G++F++
Sbjct: 1825 CGEATNGRLGLGLSSG---TIPIPRQISA-LSNYVVKKVAVHSGGRHAMALTVDGKVFSW 1880

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+
Sbjct: 1881 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGE 1928

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGS 482
            L++WG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G 
Sbjct: 1929 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGD 1988

Query: 483  PVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLG
Sbjct: 1989 GDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2047

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            HG       P +VE L+ K++  +  G     A+
Sbjct: 2048 HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 2081



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 159/323 (49%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2822

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+L+++G+   
Sbjct: 2823 GAGGRLGIGGTESVST--PTLLES-IQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAED 2879

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A +             +SG+L+TWG
Sbjct: 2880 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT------------ASGELYTWG 2927

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGHGD E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 2928 KGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 2987

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 2988 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3046

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 3047 HVRRPRQVQGLQGKKVIAIATGS 3069



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 16/280 (5%)

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A T+   ++ WG ++ +   LG      + +P   +  L  ++V  V+ G      VT+ 
Sbjct: 1763 AATIRTKVFVWGLNDKD--QLGGLKGSKIKVPS-FSETLSALNVVQVAGGSKSLFAVTAE 1819

Query: 359  GQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+++  G+ T G LG G    ++  PR++ +L      + A    H+        G  + 
Sbjct: 1820 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAV---HSG-------GRHAM 1869

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
            +    GK+F+WG+GD G+LGH  +     P  + AL       ++CG S + A+T++G +
Sbjct: 1870 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 1929

Query: 478  YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKG 535
            Y+ G   YG+LG      +L  ++   L  + V ++ACG  D     LT    V++WG G
Sbjct: 1930 YSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDG 1989

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              G+LG G ++  N P  +E L  + V  I CG  F+ A+
Sbjct: 1990 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2029



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 1883 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG--LGEYGRL 1940

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 1941 GHGDNTT---------QLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDF 1991

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 1992 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 2049

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             ++ +  P+ + G L G  +  V+ G  H   VT  GQ+F +GD   G  G+G       
Sbjct: 2050 TDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRK 2108

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 2109 PTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPS 2142



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 101/209 (48%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSS-SSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S  +  + GK++  G+   GRLG G     + +P  ++AL      +V+  
Sbjct: 1803 VVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVH 1862

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G    +ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 1863 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 1921

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+Y+WG G  GRLGHGD   +  P LV+ L   +V  + CG+     + L    
Sbjct: 1922 AITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEG 1981

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 1982 MVFSWGDGDFGKLGRGGSEGCNIPQNIER 2010



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 120/255 (47%), Gaps = 28/255 (10%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            +G ++ +G    G LG   G ++ V TP E  +L  LR V+   G     AV        
Sbjct: 2762 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTE--ALATLRPVQLIGGEQTLFAVT------- 2812

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                 + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++
Sbjct: 2813 -----ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS 2867

Query: 474  TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
             G +Y+ G    G+LG    +     RV   L    V +IA G  H A +T+  E+YTWG
Sbjct: 2868 EGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWG 2927

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG---- 583
            KG  GRLGHGD++D+  P LVEAL+  +V  + CG+     +CL        W  G    
Sbjct: 2928 KGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 2987

Query: 584  VDQSMCSGCRIPFNF 598
            + +    GC++P   
Sbjct: 2988 LGRGGSDGCKVPMKI 3002


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2958 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3007

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G++++ GE   GRLG G+ S  +  P+ I AL N  ++ VA   G  H  A+T+ G +++
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFS 3067

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+++G G 
Sbjct: 3068 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3124

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3125 YGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG----------SRDAQTLALTDEGFVFSW 3174

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   VP  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3175 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3234

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3235 GHGTDVHVRKPQMVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3293

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3294 NRKPTLVQGLEGQKITRVACGSSHSVA 3320



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 192/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP + E+   L    +  G +    VT  G++++ G   
Sbjct: 3953 IYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4012

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ +  VA   G  H  A++  G++Y+WG      G L
Sbjct: 4013 GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4070

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L G+ V  ++ G  H+A +T++G+LFT+G G +G LGHGD   
Sbjct: 4071 GHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSED 4129

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ VD+L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4130 QLKPKLVDALQGHRVIDVACG------------SGDAQTLCLTDDDMVWSWGDGDYGKLG 4177

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   +P  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4178 RGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4237

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4238 RPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4296

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 4297 LQGKKINRVACGSAHTLA 4314



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V +IA GG H+A 
Sbjct: 4055 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGVEVVDIAAGGAHSAC 4104

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  GE+F+WG+   GRLGHG   D   PKL+DAL+   V  VACG      + L+ D  
Sbjct: 4105 ITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDM 4164

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4165 VWSWGDGDYGKLGRGGSDGCKIPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4223

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4224 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4271

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4272 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4318

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P   GKLP +V   +  N ++EI
Sbjct: 4319 --KPTNAGKLPAQV--PMEYNHLQEI 4340



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/341 (33%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G ++  GE T +G LG G+  SG+         +P+ + +     ++ +A   GGRHA  
Sbjct: 3008 GKIYACGEAT-NGRLGLGL-SSGTIP-------IPRQITALSNYVIKKVAVHSGGRHAMA 3058

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3059 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3118

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG--PWHTAVVTSAGQLFTFG 365
            +WG     +G LGHG+  +   P KL   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3119 SWGLG--EYGRLGHGDNTTQLRP-KLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWG 3175

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3176 DGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3223

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T TG VY  G   +
Sbjct: 3224 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3283

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3284 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3323



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 167/334 (50%), Gaps = 24/334 (7%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y 
Sbjct: 2953 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 3012

Query: 309  WG-GSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTF 364
             G  +N   GL L  G   ++ +P+++   L    +  V+   G  H   +T  G++F++
Sbjct: 3013 CGEATNGRLGLGLSSG---TIPIPRQITA-LSNYVIKKVAVHSGGRHAMALTVDGKVFSW 3068

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+
Sbjct: 3069 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGE 3116

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGS 482
            L++WG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G 
Sbjct: 3117 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGD 3176

Query: 483  PVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLG
Sbjct: 3177 GDFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3235

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            HG       P +VE L+ K++  +  G     A+
Sbjct: 3236 HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3269



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 142/282 (50%), Gaps = 23/282 (8%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI----NVELVACGEHHT 297
           G+H   ++  GEVFSWG   GGRLGHG  + +  PK+I          +V  VACG  ++
Sbjct: 495 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYS 554

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVV 355
            A+T  G++YTWG  N  +G LGHG+      P  +    +G+ V  V+CG     T  V
Sbjct: 555 AAITADGELYTWGRGN--YGRLGHGSSEDQTTPMVVTA-FKGLKVVDVACGSGDAQTLAV 611

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           T  GQ++++GDG +G LG G      TP+ V+ L+ L  V+  CG   + A+ +      
Sbjct: 612 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK------ 665

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                  G+++TWG GD  RLGHG  E    P  + +L       V+ G +  +ALT  G
Sbjct: 666 ------DGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDG 719

Query: 476 HVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACG 516
            V + GS    Q  D   +N K P  + G  +K+ V  I+CG
Sbjct: 720 EVLSWGSNDKLQHFDTLFSNKKQPKALPGLNSKHIV-GISCG 760



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 160/332 (48%), Gaps = 40/332 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG      LG  + ++V+ P    AL ++ V  + C E     ++ SG +Y+    
Sbjct: 415 EVIAWG-----LLGWKLYANVNGPIQCKALSSLGVTQIVCSEKGFLILSSSGAVYS---- 465

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDGTFG 370
                     N  S  L   L   L    +  ++  P   H   ++S G++F++G G  G
Sbjct: 466 ---------QNYKSTTLAPMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGG 516

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD   +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 517 RLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAIT------------ADGELY 564

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E +  P  V A        V+CG   + T+A+T  G V++ G   
Sbjct: 565 TWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGD 624

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  VE KL    + ++ CG      LT   +VYTWGKG N RLGHG
Sbjct: 625 YGKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 683

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             +   +P L+++L+ K+V  +  G++   A+
Sbjct: 684 TDEHVRYPKLLDSLQGKKVVDVAVGSTHCLAL 715



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 37/296 (12%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAG--VKMDSFVPKAVESAVV 232
           + H DG       S G+VF WG C   G LG   H   +Y      + +F  K     VV
Sbjct: 490 AAHPDGQHYLALSSNGEVFSWG-CGDGGRLG---HGDTTYLEEPKMIGTFNGKQAGKHVV 545

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
               ++ACG  ++A +T  GE+++WG    GRLGHG   D + P ++ A K + V  VAC
Sbjct: 546 ----HVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVAC 601

Query: 293 --GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
             G+  T AVT +G +++WG  + ++G LG G       P KL   L+ + +  V CG  
Sbjct: 602 GSGDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTP-KLVEKLQDLDIVKVCCGSQ 658

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            +  +T  GQ++T+G G    LGHG    V  P+ +DSL+G + V  A G  H  A+ + 
Sbjct: 659 FSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTD- 717

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCG 464
                       G++ +WG  D  +L H D     +  P  +  L   +   +SCG
Sbjct: 718 -----------DGEVLSWGSND--KLQHFDTLFSNKKQPKALPGLNSKHIVGISCG 760



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 20/282 (7%)

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A T+   ++ WG ++ +   LG      + +P   +  L  ++V  V+ G      VT  
Sbjct: 2951 AATIRTKVFVWGLNDKD--QLGGLKGSKIKVPS-FSETLSALNVVQVAGGSKSLFAVTVE 3007

Query: 359  GQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGSS 415
            G+++  G+ T G LG G    ++  PR++ +L    ++ V    G  H  A+        
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALT------- 3060

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                   GK+F+WG+GD G+LGH  +     P  + AL       ++CG S + A+T++G
Sbjct: 3061 -----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 3115

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWG 533
             +Y+ G   YG+LG      +L  ++   L  + V ++ACG  D     LT    V++WG
Sbjct: 3116 ELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWG 3175

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G  G+LG G ++  N P  +E L  + V  I CG  F+ A+
Sbjct: 3176 DGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 3217



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3071 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG--LGEYGRL 3128

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3129 GHGDNTT---------QLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDF 3179

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3180 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3237

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             ++ +  P+ + G L G  +  V+ G  H   VT  GQ++ +GD   G  G+G       
Sbjct: 3238 TDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3296

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3297 PTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPS 3330



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 19/277 (6%)

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            SG +Y WG ++   G LG      + +P      L  +    +  G      VT+ G+L+
Sbjct: 3950 SGTIYGWGHNH--RGQLGGIEGAKVKVPTSTEA-LATLRPVQLIGGEQTLFAVTADGKLY 4006

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
              G G  G LG G   SVSTP  ++S++   +R V    G  H  A+             
Sbjct: 4007 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLAL------------S 4054

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            S G++++WG+ + G+LGHG++     P  + +L       ++ G + +  +T +G ++T 
Sbjct: 4055 SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTW 4114

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANG 538
            G   YG+LG   +  +L  ++   L  + V ++ACG  D     LT    V++WG G  G
Sbjct: 4115 GKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYG 4174

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +LG G +D    P  +++L    V  + CG+ F+ A+
Sbjct: 4175 KLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVAL 4211



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 109/230 (47%), Gaps = 32/230 (13%)

Query: 150 GSDGRTGHLKGLSGDT---FRVSLSSAVSSSSQGSGHDDGDSL-----GDVFIWGECTGD 201
           G+ GR GH  G S D      V+    +       G  D  +L     G V+ WG+  GD
Sbjct: 569 GNYGRLGH--GSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGD--GD 624

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
               G + R GS  G K     PK VE    LD+  + CG + +  +TK G+V++WG+  
Sbjct: 625 Y---GKLGRGGS-DGCK----TPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGD 676

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN--CNFGLL 319
             RLGHG D  V +PKL+D+L+   V  VA G  H  A+T  G++ +WG ++   +F  L
Sbjct: 677 NQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTL 736

Query: 320 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGP-----WHTAVVTSAGQLFTF 364
               +     PK L G L   H+  +SCGP     W ++   S G+   F
Sbjct: 737 FSNKKQ----PKALPG-LNSKHIVGISCGPGQSFAWSSSSEWSVGKRVPF 781



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2991 VVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVH 3050

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G    +ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3051 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3109

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+Y+WG G  GRLGHGD   +  P LV+ L   +V  + CG+     + L    
Sbjct: 3110 AITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEG 3169

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC +P N +R
Sbjct: 3170 FVFSWGDGDFGKLGRGGSEGCNVPQNIER 3198



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 117/253 (46%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3950 SGTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVT--------- 4000

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4001 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4057

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V +IA G  H A +T+  E++TWGKG
Sbjct: 4058 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKG 4117

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGHGD++D+  P LV+AL+  +V  + CG+     +CL        W  G    + 
Sbjct: 4118 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 4177

Query: 586  QSMCSGCRIPFNF 598
            +    GC+IP   
Sbjct: 4178 RGGSDGCKIPMKI 4190


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3983 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4029

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4030 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4089

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4090 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4146

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4147 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSVVWA 4195

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4255

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4256 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4314

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4315 HVREPTLVTVLQGKNIRQISAGRCHSAA 4342



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   +++LT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3983 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4036

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4037 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4093

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4094 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4141

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV-YTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G V +  G   Y
Sbjct: 4142 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDY 4201

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4202 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4261

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4262 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4291



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4072 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4131

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4132 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4188

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4189 DGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4248

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4308

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4309 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4344



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 152/302 (50%), Gaps = 32/302 (10%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCS 590
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + ++     V       C 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACL 644

Query: 591 GC 592
           GC
Sbjct: 645 GC 646



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 46.6 bits (109), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4267 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4326

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 4327 GKNIRQISAGRCHSAAWT 4344


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
            domestica]
          Length = 4790

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/412 (33%), Positives = 203/412 (49%), Gaps = 37/412 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  +P A  S      Q + CG     ++  
Sbjct: 3927 DVYLWGA-----------GRHGQLAEAGRNVMIPAAAPS--FSQAQQVICGQNCTFVIQA 3973

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 3974 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4033

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4034 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVIQMSCGFKHSAVVTSDGKLFTFGNG 4090

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4091 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4139

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4140 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4199

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E+IA G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4200 LPEGRARNHNRPQQIP-VLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4258

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNF 598
                P+L+  L+ K ++ I  G   +AA     W +        G  +P   
Sbjct: 4259 HVREPTLITILQGKNIRQISAGRCHSAA-----WTASPVPPRAPGVSVPLQL 4305



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           + +  +S G  H+   T+
Sbjct: 718 VAIQQISAGTSHSLAWTA 735


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2901 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2950

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 2951 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFS 3010

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3011 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3067

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3068 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3117

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   VP  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3118 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3177

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3178 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3236

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3237 NRKPTLVQGLEGQKITRVACGSSHSVA 3263



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3894 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3953

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3954 GGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4011

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHG+      P+ +   L G+ V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4012 GHGSRSPCDRPRVIES-LRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4070

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4071 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4118

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4119 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4178

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4179 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4237

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4238 LQGKKVNRVACGSAHTLA 4255



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2951 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYMVKKVAVHSGGRHATA 3001

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3002 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3061

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3062 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3118

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3119 DGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3166

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3167 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3226

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3227 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3266



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 166/333 (49%), Gaps = 22/333 (6%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y 
Sbjct: 2896 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2955

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 2956 CG--EATNGRLGLGISSGTVPIPRQITA-LSSYMVKKVAVHSGGRHATALTVDGKVFSWG 3012

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 3013 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 3060

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 3061 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3120

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGH
Sbjct: 3121 DFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3179

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P +VE L+ K++  +  G     A+
Sbjct: 3180 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3212



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 158/326 (48%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G                P+ +ES   ++V ++A GG H+A 
Sbjct: 3996 SEGEVYSWGEAE-DGKLGHGSRSPCDR---------PRVIESLRGVEVVDVAAGGAHSAC 4045

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4046 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4105

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4106 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4164

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4165 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4212

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4213 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4259

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4260 --KPTSAGKLPAQV--PMECNHLQEI 4281



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 155/323 (47%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3951

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S      L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3952 GAGGRLGIGGTESVS---SPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4008

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4009 GKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVT------------AAGDLYTWG 4056

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4057 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4116

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4117 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4175

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4176 HVRRPRQVQGLQGKKVIAIATGS 4198



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 158/341 (46%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 355 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYN 409

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 410 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 456

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 457 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 504

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+  RL HG      +   ++ L    F   SCG   + T+A    G V++ G   
Sbjct: 505 TWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGD 564

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 565 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 623

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 624 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 664



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3014 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3071

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3072 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3122

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3123 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3180

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3181 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3239

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3240 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3273



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2934 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVH 2993

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 2994 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3052

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3053 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3112

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC +P N +R
Sbjct: 3113 LVFSWGDGDFGKLGRGGSEGCNVPQNIER 3141



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 121/309 (39%), Gaps = 71/309 (22%)

Query: 220 DSFVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           D+  P+ V+     ++  IA    G H   +   GEV+SWG   GGRLGHG    +  PK
Sbjct: 411 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 470

Query: 278 LIDALKNI----NVELVACGEHHTCAVTLSGDMYTWGGSN-------------------- 313
           +I A        +V  +ACG  ++ A+T  G++YTWG  N                    
Sbjct: 471 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISG 530

Query: 314 ----------C----------------------NFGLLGHGNEMSLWLPKKLNGPLEGIH 341
                     C                      ++G LG G       PK +   L+ + 
Sbjct: 531 LDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLD 589

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  V CG   +  +T  GQ++++G G    LGHG    V  P+ ++ L+G + +  A G 
Sbjct: 590 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 649

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            H  A+ E              ++ +WG  D+ +     +  +  P  +  L   +   +
Sbjct: 650 THCLALTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGI 697

Query: 462 SCGHSLTVA 470
           +CG + + A
Sbjct: 698 ACGPAQSFA 706



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3891 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3941

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3942 ---ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3998

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 3999 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKG 4058

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4059 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4118

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4119 RGGSDGCKVPMKI 4131



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 17/162 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG+  GD    G + R GS  G K     PK +E    LDV  + CG + +  +T
Sbjct: 555 GQVWSWGD--GDY---GKLGRGGS-DGCK----TPKLIEKLQDLDVVKVRCGSQFSIALT 604

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           K G+V+SWG+    RLGHG +  V +PKL++ L+   V  VA G  H  A+T   ++++W
Sbjct: 605 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 664

Query: 310 GGSN-CNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 349
           G ++ C      H + + +  P+    P L+  H+  ++CGP
Sbjct: 665 GSNDQCQ-----HFDTLRVTKPEPAALPGLDTKHIVGIACGP 701


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  191 bits (484), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2947 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2996

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G++++ GE   GRLG G+ S  +  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 2997 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3056

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG    + G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+++G G 
Sbjct: 3057 WG--EGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3113

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3114 YGRLGHGDNATQLRPKLVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3163

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3164 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3223

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3224 GHGTDVHVRKPQMVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3282

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3283 NRKPTLVQGLEGQKITRVACGSSHSVA 3309



 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 191/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3942 IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4001

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ +  VA   G  H  A++  G++Y+WG      G L
Sbjct: 4002 GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4059

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L G+ V  ++ G  H+A +T++G+LFT+G G +G LGHGD   
Sbjct: 4060 GHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSED 4118

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ VD+L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4119 QLKPKLVDALQGHRVIDVACG------------SGDAQTLCLTDDDMVWSWGDGDYGKLG 4166

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   +P  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4167 RGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4226

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4227 RPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4285

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 4286 LQGKKINRVACGSAHTLA 4303



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/327 (34%), Positives = 163/327 (49%), Gaps = 40/327 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V +IA GG H+A 
Sbjct: 4044 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGVEVVDIAAGGAHSAC 4093

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  GE+F+WG+   GRLGHG   D   PKL+DAL+   V  VACG      + L+ D  
Sbjct: 4094 ITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDM 4153

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V+ V CG   +  +T +G ++T+G G
Sbjct: 4154 VWSWGDGDYGKLGRGGSDGCKIPMKIDS-LTGLGVTKVECGSQFSVALTKSGAVYTWGKG 4212

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4213 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4260

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4261 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4307

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEIA 514
               P   GKLP +V   +  N ++EI+
Sbjct: 4308 --KPTNAGKLPAQV--PMEYNHLQEIS 4330



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G ++  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2997 GKIYACGEAT-NGRLGLGL-SSGTIP-------IPRQITALSNYVVKKVAVHSGGRHAMA 3047

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3048 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3107

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            +WG     +G LGHG+  +   P KL   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3108 SWGLG--EYGRLGHGDNATQLRP-KLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3164

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3165 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3212

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T TG VY  G   +
Sbjct: 3213 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3272

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3273 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3312



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 167/334 (50%), Gaps = 24/334 (7%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y 
Sbjct: 2942 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 3001

Query: 309  WG-GSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTF 364
             G  +N   GL L  G   ++ +P+++   L    V  V+   G  H   +T  G++F++
Sbjct: 3002 CGEATNGRLGLGLSSG---TIPIPRQITA-LSNYVVKKVAVHSGGRHAMALTVDGKVFSW 3057

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+
Sbjct: 3058 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGE 3105

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGS 482
            L++WG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G 
Sbjct: 3106 LYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3165

Query: 483  PVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLG
Sbjct: 3166 GDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3224

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            HG       P +VE L+ K++  +  G     A+
Sbjct: 3225 HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3258



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 142/281 (50%), Gaps = 24/281 (8%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI----NVELVACGEHHT 297
           G+H   ++  GEVFSWG   GGRLGHG  + +  P +I A        +V  +ACG  ++
Sbjct: 490 GQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYS 549

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVV 355
             +T+ G++YTWG    N+G LGHG+      P  +   L+G+ V  V+CG     T  V
Sbjct: 550 AVITIDGELYTWG--RGNYGRLGHGSSEDQTTPMLVTA-LKGLKVVDVACGSGDAQTLAV 606

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           T  GQ++++GDG +G LG G      TP+ V+ L+ L  V+  CG   + A+ +      
Sbjct: 607 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK------ 660

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                  G+++TWG GD  RLGHG  E    P  +  L       V+ G +  +ALT  G
Sbjct: 661 ------DGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDG 714

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
            V++ GS    Q  D  +N K P  + G   K+ V  I+CG
Sbjct: 715 EVHSWGSNDKLQHFDTLSNKKQPKALPG--LKHIV-GISCG 752



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 160/341 (46%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG      LG  + ++VS P    +L ++ V  + C E     ++ SG +YT    
Sbjct: 410 EVIAWG-----LLGWKLHANVSGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYT---- 460

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDGTFG 370
                     N  S  L   L   L    +  ++  P   H   ++S G++F++G G  G
Sbjct: 461 ---------QNYKSTTLAPMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGG 511

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD   +  P  + +  G +     V  ACG  ++A +               G+L+
Sbjct: 512 RLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVIT------------IDGELY 559

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E +  P  V AL       V+CG   + T+A+T  G V++ G   
Sbjct: 560 TWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGD 619

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  VE KL    + ++ CG      LT   +VYTWGKG N RLGHG
Sbjct: 620 YGKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 678

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   FP L++ L+ K+V  +  G++   A+     +H W
Sbjct: 679 TDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSW 719



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 134/270 (49%), Gaps = 35/270 (12%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAG--VKMDSFVPKAVESAVV 232
           + H DG       S G+VF WG C   G LG   H   +Y      + +F  K     VV
Sbjct: 485 AAHPDGQHYLALSSNGEVFSWG-CGDGGRLG---HGDATYLEEPTMIAAFNGKQAGKHVV 540

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
               +IACG  ++A++T  GE+++WG    GRLGHG   D + P L+ ALK + V  VAC
Sbjct: 541 ----HIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVAC 596

Query: 293 --GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
             G+  T AVT +G +++WG  + ++G LG G       P KL   L+ + +  V CG  
Sbjct: 597 GSGDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTP-KLVEKLQDLDIVKVCCGSQ 653

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            +  +T  GQ++T+G G    LGHG    V  P+ +D+L+G + V  A G  H  A+ + 
Sbjct: 654 FSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTD- 712

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGD 440
                       G++ +WG  D  +L H D
Sbjct: 713 -----------DGEVHSWGSND--KLQHFD 729



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3060 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG--LGEYGRL 3117

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3118 GHGDNAT---------QLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3168

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3169 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3226

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             ++ +  P+ + G L G  +  V+ G  H   VT  GQ++ +GD   G  G+G       
Sbjct: 3227 TDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3285

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3286 PTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPS 3319



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 23/279 (8%)

Query: 303  SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            SG +Y WG ++   G LG   G ++ +  P +    L  + +     G      VT+ G+
Sbjct: 3939 SGTIYGWGHNH--RGQLGGIEGAKVKVPTPTEALATLRPVQLIG---GEQTLFAVTADGK 3993

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGSSSSS 418
            L+  G G  G LG G   SVSTP  ++S++   +R V    G  H  A+           
Sbjct: 3994 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLAL----------- 4042

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
              S G++++WG+ + G+LGHG++     P  + +L       ++ G + +  +T +G ++
Sbjct: 4043 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELF 4101

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 536
            T G   YG+LG   +  +L  ++   L  + V ++ACG  D     LT    V++WG G 
Sbjct: 4102 TWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4161

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G+LG G +D    P  +++L    V  + CG+ F+ A+
Sbjct: 4162 YGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVAL 4200



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 106/211 (50%), Gaps = 32/211 (15%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSA-----VSSSSQGSGHDDGDSL-----GDVFIWGECT 199
           G+ GR GH  G S D     L +A     V   + GSG  D  +L     G V+ WG+  
Sbjct: 564 GNYGRLGH--GSSEDQTTPMLVTALKGLKVVDVACGSG--DAQTLAVTENGQVWSWGD-- 617

Query: 200 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
           GD    G + R GS  G K     PK VE    LD+  + CG + +  +TK G+V++WG+
Sbjct: 618 GDY---GKLGRGGS-DGCK----TPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGK 669

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLL 319
               RLGHG D  V  PKL+D L+   V  VA G  H  A+T  G++++WG ++     L
Sbjct: 670 GDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSND----KL 725

Query: 320 GHGNEMSLWLPKKLNGPLEGI-HVSSVSCGP 349
            H + +S    KK    L G+ H+  +SCGP
Sbjct: 726 QHFDTLS---NKKQPKALPGLKHIVGISCGP 753



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2980 VVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVH 3039

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G    +ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3040 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3098

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+Y+WG G  GRLGHGD   +  P LV+ L   +V  + CG+     + L    
Sbjct: 3099 AITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEG 3158

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3159 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3187



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 120/255 (47%), Gaps = 28/255 (10%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            +G ++ +G    G LG   G ++ V TP E  +L  LR V+   G     AV        
Sbjct: 3939 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTE--ALATLRPVQLIGGEQTLFAVT------- 3989

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                 + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++
Sbjct: 3990 -----ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS 4044

Query: 474  TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
             G VY+ G    G+LG    +     RV   L    V +IA G  H A +T+  E++TWG
Sbjct: 4045 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG 4104

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG---- 583
            KG  GRLGHGD++D+  P LV+AL+  +V  + CG+     +CL        W  G    
Sbjct: 4105 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 4164

Query: 584  VDQSMCSGCRIPFNF 598
            + +    GC+IP   
Sbjct: 4165 LGRGGSDGCKIPMKI 4179


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  191 bits (484), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 137/388 (35%), Positives = 200/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DVF+WG          G H   + AG    S  P    S      Q + CG     ++  
Sbjct: 4089 DVFLWG---------AGRHGQLAEAGRNAVSPPP----SPSFCQAQQVICGQNCTFVIQA 4135

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4136 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4195

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVT+ G+LFTFG+G
Sbjct: 4196 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4252

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +    ACG+ HT  V           +     ++ 
Sbjct: 4253 DYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVV-----------STDGSMVWA 4301

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4302 FGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4361

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P +V   L+  FVE+IA G  H   L++  +VY WG  + G+LG G T+
Sbjct: 4362 LPEGRARNHNRPQQVPA-LSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTN 4420

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV +L+ K V+ I  G   +AA
Sbjct: 4421 HVREPTLVTSLQGKSVRQISAGRCHSAA 4448



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 375 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 422

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 423 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 482

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 483 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 540

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 541 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 587

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 588 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 647

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 648 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 706

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 707 PITKPKKVSGLDGVAIQQISAGTSHSLA 734



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 162/327 (49%), Gaps = 22/327 (6%)

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
            +VF WG    G+L     + VS P    +      + V CG++ T  +  +G +   G  
Sbjct: 4089 DVFLWGAGRHGQLAEAGRNAVSPPP---SPSFCQAQQVICGQNCTFVIQANGTVLACG-- 4143

Query: 313  NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGDGTF 369
              ++G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GDG +
Sbjct: 4144 EGSYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4202

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+      PR++++L+G   V+ +CG  H+A V             + GKLFT+G
Sbjct: 4203 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLFTFG 4250

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVYGQL 488
            +GD GRLG G+   + +P  VAAL      +V+CG + T+ ++T G  V+  G   YG+L
Sbjct: 4251 NGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKL 4310

Query: 489  GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
            G   +  K   +    L    ++++ACG      LT    VYT+G+     L  G   + 
Sbjct: 4311 GLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4370

Query: 549  NFPSLVEALKDKQVKSIVCGTSFTAAI 575
            N P  V AL    V+ I  G   T A+
Sbjct: 4371 NRPQQVPALSGVFVEDIAVGAEHTLAL 4397



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 146/289 (50%), Gaps = 17/289 (5%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4178 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4237

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT VV++
Sbjct: 4238 AVVTADGKLFTFG--NGDYGRLGLGNTSNKKLPERVAA-LEGYQIGEVACGLNHTLVVST 4294

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+ +       
Sbjct: 4295 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTK------- 4347

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                  G ++T+G      L  G       P  V AL       ++ G   T+AL+ +G 
Sbjct: 4348 -----DGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGD 4402

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            VY  GS   GQLG    N      +   L    V +I+ G  H A  +S
Sbjct: 4403 VYAWGSNSEGQLGLGHTNHVREPTLVTSLQGKSVRQISAGRCHSAAWSS 4451



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 370 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 424

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 425 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 476

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 477 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 531 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 586

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 587 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 644

Query: 587 SMCSGC 592
             C GC
Sbjct: 645 --CLGC 648



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 3/134 (2%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ V+    + ++ +ACG + +  +TK G V+++G++    L  G   + + P+ + AL 
Sbjct: 4321 PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPALS 4380

Query: 284  NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
             + VE +A G  HT A++ SGD+Y WG ++     LGH N +       L   L+G  V 
Sbjct: 4381 GVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVR---EPTLVTSLQGKSVR 4437

Query: 344  SVSCGPWHTAVVTS 357
             +S G  H+A  +S
Sbjct: 4438 QISAGRCHSAAWSS 4451



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 605 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 662

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 663 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 719

Query: 340 IHVSSVSCGPWHTAVVTS 357
           + +  +S G  H+   T+
Sbjct: 720 VAIQQISAGTSHSLAWTA 737


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  191 bits (484), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3990 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4036

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4096

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4097 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4153

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4154 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSVVWA 4202

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4203 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4262

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4263 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4321

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4322 HVREPTLVTVLQGKNIRQISAGRCHSAA 4349



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   +++LT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3990 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4043

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4044 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4100

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4101 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4148

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV-YTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G V +  G   Y
Sbjct: 4149 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDY 4208

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4209 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4268

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4269 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4298



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4079 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4138

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4139 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4195

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4196 DGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4255

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4315

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4316 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4351



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 152/302 (50%), Gaps = 32/302 (10%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCS 590
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + ++     V       C 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACL 644

Query: 591 GC 592
           GC
Sbjct: 645 GC 646



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4274 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4333

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 4334 GKNIRQISAGRCHSAAWT 4351


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2923 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2972

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G++++ GE   GRLG G+ S  +  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 2973 GKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3032

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG    + G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+++G G 
Sbjct: 3033 WG--EGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3089

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3090 YGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3139

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3140 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3199

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3200 GHGTDVHVRKPQIVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3258

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3259 NRKPTLVQGLEGQKITRVACGSSHSVA 3285



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 192/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3897 IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3956

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3957 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4014

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L G+ V  ++ G  H+A +T++G+LFT+G G +G LGHGD   
Sbjct: 4015 GHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSED 4073

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ VD+L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4074 QLKPKLVDALQGHRVIDVACG------------SGDAQTLCLTDDDMVWSWGDGDYGKLG 4121

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4122 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4181

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4182 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4240

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 4241 LQGKKINRVACGSAHTLA 4258



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/327 (33%), Positives = 162/327 (49%), Gaps = 40/327 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V +IA GG H+A 
Sbjct: 3999 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGVEVVDIAAGGAHSAC 4048

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  GE+F+WG+   GRLGHG   D   PKL+DAL+   V  VACG      + L+ D  
Sbjct: 4049 ITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDM 4108

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4109 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4167

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4168 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4215

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4216 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4262

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEIA 514
               P   GK+P +V   +  N ++EI+
Sbjct: 4263 --KPTNAGKMPAQV--PMEYNHLQEIS 4285



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/341 (33%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G ++  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2973 GKIYACGEAT-NGRLGLGLS-SGTIQ-------IPRQISALSNYVVKKVAVHSGGRHAMA 3023

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3024 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3083

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            +WG     +G LGHG+  +   P KL   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3084 SWGLG--EYGRLGHGDNTTQLRP-KLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3140

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3141 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3188

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3189 WTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3248

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3249 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3288



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 166/330 (50%), Gaps = 24/330 (7%)

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-G 311
            +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y  G  
Sbjct: 2922 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEA 2981

Query: 312  SNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGT 368
            +N   GL L  G   ++ +P++++  L    V  V+   G  H   +T  G++F++G+G 
Sbjct: 2982 TNGRLGLGLSSG---TIQIPRQISA-LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 3037

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
             G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L++W
Sbjct: 3038 DGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGELYSW 3085

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYG 486
            G G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G   +G
Sbjct: 3086 GLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG 3145

Query: 487  QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            +LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGHG  
Sbjct: 3146 KLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTD 3204

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                 P +VE L+ K++  +  G     A+
Sbjct: 3205 VHVRKPQIVEGLRGKKIVHVAVGALHCLAV 3234



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 180/394 (45%), Gaps = 34/394 (8%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3954

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3955 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4011

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A +             +SG+LFTWG
Sbjct: 4012 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT------------ASGELFTWG 4059

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGHGD E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 4060 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 4119

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4120 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4178

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAIC-----LHKWVSGVDQSMCSGC-------RI 594
                P  V+ L+ K+V +I  G S     C     ++ W    +  +  G        R+
Sbjct: 4179 HVRRPRQVQGLQGKKVIAIATG-SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 4237

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAP 628
                + K+ N   CG  +    S+ K   A   P
Sbjct: 4238 VAALQGKKINRVACGSAHTLAWSTSKPTNAGKMP 4271



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 166/340 (48%), Gaps = 42/340 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG      LG  + ++V  P    AL +  V  + C E     ++ SG +YT    
Sbjct: 375 EVIAWG-----LLGWKLYANVCGPIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYK 429

Query: 313 NCNFG-LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           +     +L HG  +S     KL    +G H  ++S          ++G+++++G G  G 
Sbjct: 430 STTLAPMLIHG--LSSRKIVKLAAHPDGQHFLALS----------TSGEVYSWGCGDGGR 477

Query: 372 LGHGDRISVSTPREVDSLKGLRT----VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           LGHGD   +  P  + +  G +T    V+ ACG  ++AAV             + G+L+T
Sbjct: 478 LGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVT------------ADGELYT 525

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVY 485
           WG G+ GRLGHG  E    P  V AL       V+CG   + T+A+T  G V++ G   Y
Sbjct: 526 WGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 585

Query: 486 GQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           G+LG   ++G K P  VE KL    + ++ CG      LT   +VYTWGKG N RLGHG 
Sbjct: 586 GKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT 644

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
            +   +P L+++L+ K+V  I  G++   A+     +H W
Sbjct: 645 DEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSW 684



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 140/296 (47%), Gaps = 37/296 (12%)

Query: 181 SGHDDGDSL------GDVFIWGECTGDGILGGGIHRSGSYAG--VKMDSFVPKAVESAVV 232
           + H DG         G+V+ WG C   G LG   H   +Y      + +F  K     VV
Sbjct: 450 AAHPDGQHFLALSTSGEVYSWG-CGDGGRLG---HGDATYLEEPALITTFSGKQTGKQVV 505

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
                IACG  ++A VT  GE+++WG    GRLGHG   DV+ P L+ ALK   V  VAC
Sbjct: 506 ----QIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVAC 561

Query: 293 --GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
             G+  T AVT +G +++WG  + ++G LG G       P KL   L+ + +  V CG  
Sbjct: 562 GSGDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTP-KLVEKLQDLDIVKVCCGSQ 618

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            +  +T  GQ++T+G G    LGHG    V  P+ +DSL+G + V  A G  H  A+ + 
Sbjct: 619 FSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTD- 677

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCG 464
                       G++ +WG  D  +L H D     +  P  +  L   +   +SCG
Sbjct: 678 -----------EGEVHSWGSND--KLQHFDTLFPNKKQPKALPGLNSKHIVGISCG 720



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3036 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG--LGEYGRL 3093

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3094 GHGDNTT---------QLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3144

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3145 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3202

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             ++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3203 TDVHVRKPQIVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3261

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3262 PTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPS 3295



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 110/230 (47%), Gaps = 32/230 (13%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSAVSSS---SQGSGHDDGDSL-----GDVFIWGECTGD 201
           G+ GR GH  G S D     L +A+          G  D  +L     G V+ WG+  GD
Sbjct: 529 GNYGRLGH--GSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGD--GD 584

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
               G + R GS  G K     PK VE    LD+  + CG + +  +TK G+V++WG+  
Sbjct: 585 Y---GKLGRGGS-DGCK----TPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGD 636

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN--CNFGLL 319
             RLGHG D  V +PKL+D+L+   V  +A G  H  A+T  G++++WG ++   +F  L
Sbjct: 637 NQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDTL 696

Query: 320 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGP-----WHTAVVTSAGQLFTF 364
               +     PK L G L   H+  +SCGP     W +    S GQ   F
Sbjct: 697 FPNKKQ----PKALPG-LNSKHIVGISCGPGQSFAWSSCSEWSVGQRVPF 741



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 100/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  ++AL      +V+  
Sbjct: 2956 VVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVH 3015

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G    +ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3016 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3074

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+Y+WG G  GRLGHGD   +  P LV+ L   +V  + CG+     + L    
Sbjct: 3075 AITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEG 3134

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3135 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3163



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 28/255 (10%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            +G ++ +G    G LG   G ++ V TP E  +L  LR V+   G     AV        
Sbjct: 3894 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTE--ALATLRPVQLIGGEQTLFAVT------- 3944

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                 + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++
Sbjct: 3945 -----ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 3999

Query: 474  TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
             G VY+ G    G+LG    +     RV   L    V +IA G  H A +T+  E++TWG
Sbjct: 4000 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG 4059

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG---- 583
            KG  GRLGHGD++D+  P LV+AL+  +V  + CG+     +CL        W  G    
Sbjct: 4060 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 4119

Query: 584  VDQSMCSGCRIPFNF 598
            + +    GC++P   
Sbjct: 4120 LGRGGSDGCKVPMKI 4134


>gi|255080574|ref|XP_002503867.1| predicted protein [Micromonas sp. RCC299]
 gi|226519134|gb|ACO65125.1| predicted protein [Micromonas sp. RCC299]
          Length = 1066

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 197/616 (31%), Positives = 268/616 (43%), Gaps = 113/616 (18%)

Query: 5   PIFQRYPRPEKEYQSFSLIYND------RSLDLICKDKDEAEVWFTGLKALISRSHYRKG 58
           P F+   +P    Q  SL+Y +      RSLDL+C+D  +A +W  GL A+  R     G
Sbjct: 80  PAFKSSKQPSPPDQCLSLMYREGVGKKPRSLDLVCEDAGQARMWRLGLDAVRER-----G 134

Query: 59  RAESRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDK 118
            A   ++  SS         +   P SSP                           V D 
Sbjct: 135 GAGVTAEAFSS-------DDEDVVPASSP---------------------------VRDA 160

Query: 119 ALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSS 178
            L +    AA   V +   SA      L S     R G  +G  G   R   SSA+S   
Sbjct: 161 KLDE---MAADFGVAMKVNSAASKFMKLKSP----RGGAEQGDVGRGRRSLRSSAISDPR 213

Query: 179 QGSGHDDGDSLGDVFIWGEC----------TGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
           +            +F+WG             GD     G+   G   G   +  VP    
Sbjct: 214 E------------LFLWGRMPSEFEPPPIDVGDPDAAAGV---GPAVGGWREWSVPARAP 258

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD----------SDVSHPKL 278
            A  LDV  +A G RHA  V +   V++WG+  GGRLG GVD          S VS  ++
Sbjct: 259 GADGLDVVAVALGARHAVAVVRHQGVYTWGDGAGGRLGRGVDQRGRGRPSKLSVVSGGEV 318

Query: 279 IDALKNIN-VELVACGEHHTCAVTL-SGDMYTWG-GSNCNFGLLG-----HGNEMSLWLP 330
            D       +  V+CG  +T AV    G  Y WG  S    G LG      G    + LP
Sbjct: 319 SDRGAGFERIREVSCGGQYTVAVNYGDGAAYAWGDASGGCHGALGMASPSKGIVAGVSLP 378

Query: 331 KKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH-GDRISVSTPREVDS 388
            K++ G   G  VS VSCG +H A VT+AG LF +G+G F  LGH GD+ +   PR V  
Sbjct: 379 TKVSVGFPVGTRVSRVSCGAFHAAAVTAAGDLFCWGEGAFHALGHDGDKSTCQHPRRVRG 438

Query: 389 L--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR-- 444
           L   G R    +CGV+HTAAV    +  +++     G+L+TWGD D G+LGHG + A+  
Sbjct: 439 LWDAGRRVSNVSCGVYHTAAVA---IDRTTTGCAGRGELWTWGDADGGKLGHGAEAAKEK 495

Query: 445 --LVPTCVAALVE-PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV 501
             + P  V+ L E  +   VSCG   T+A    G V+  GS   G++  P      P RV
Sbjct: 496 AVVAPRRVSGLDENADVTTVSCGQWHTLAACADGVVWVCGS--VGKVA-PAEPALTPERV 552

Query: 502 EGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDK 560
            G       E IA G++H VA+     ++++WG+G  G LGH    D + P  VEAL  +
Sbjct: 553 PG--IPGGAEAIASGEWHAVAIGRGGEKMFSWGRGRRGALGHAGGRDEHAPRAVEALAGR 610

Query: 561 QVKSIVCGTSFTAAIC 576
           +V  + CG   TAA+ 
Sbjct: 611 RVHHVACGPESTAAVV 626



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 138/307 (44%), Gaps = 46/307 (14%)

Query: 190 GDVFIWGECTGD--GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           G  + WG+ +G   G LG      G  AGV + + V  +V   V   V  ++CG  HAA 
Sbjct: 346 GAAYAWGDASGGCHGALGMASPSKGIVAGVSLPTKV--SVGFPVGTRVSRVSCGAFHAAA 403

Query: 248 VTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLIDALKNI--NVELVACGEHHTCAVTLS- 303
           VT  G++F WGE     LGH G  S   HP+ +  L +    V  V+CG +HT AV +  
Sbjct: 404 VTAAGDLFCWGEGAFHALGHDGDKSTCQHPRRVRGLWDAGRRVSNVSCGVYHTAAVAIDR 463

Query: 304 --------GDMYTWGGSNCNFGLLGHG----NEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
                   G+++TWG  + + G LGHG     E ++  P++++G  E   V++VSCG WH
Sbjct: 464 TTTGCAGRGELWTWG--DADGGKLGHGAEAAKEKAVVAPRRVSGLDENADVTTVSCGQWH 521

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVS----TPREVDSLKGLRTVRAACGVWHTAAV 407
           T        L    DG   V G   +++ +    TP  V  + G      A G WH  A+
Sbjct: 522 T--------LAACADGVVWVCGSVGKVAPAEPALTPERVPGIPGGAEA-IASGEWHAVAI 572

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
                           K+F+WG G RG LGH        P  V AL       V+CG   
Sbjct: 573 -----------GRGGEKMFSWGRGRRGALGHAGGRDEHAPRAVEALAGRRVHHVACGPES 621

Query: 468 TVALTTT 474
           T A+ ++
Sbjct: 622 TAAVVSS 628



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 98/228 (42%), Gaps = 37/228 (16%)

Query: 381 STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG- 439
           S P       GL  V  A G  H  AVV                ++TWGDG  GRLG G 
Sbjct: 252 SVPARAPGADGLDVVAVALGARHAVAVVRHQ------------GVYTWGDGAGGRLGRGV 299

Query: 440 DKEARLVPTCVAALVEPNFC----------QVSCGHSLTVALTT-TGHVYTMGSP---VY 485
           D+  R  P+ ++ +                +VSCG   TVA+    G  Y  G      +
Sbjct: 300 DQRGRGRPSKLSVVSGGEVSDRGAGFERIREVSCGGQYTVAVNYGDGAAYAWGDASGGCH 359

Query: 486 GQLG--DPK----ANGKLPTRVE-GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
           G LG   P     A   LPT+V  G      V  ++CG +H A +T+  +++ WG+GA  
Sbjct: 360 GALGMASPSKGIVAGVSLPTKVSVGFPVGTRVSRVSCGAFHAAAVTAAGDLFCWGEGAFH 419

Query: 539 RLGH-GDTDDRNFPSLVEALKD--KQVKSIVCGTSFTAAICLHKWVSG 583
            LGH GD      P  V  L D  ++V ++ CG   TAA+ + +  +G
Sbjct: 420 ALGHDGDKSTCQHPRRVRGLWDAGRRVSNVSCGVYHTAAVAIDRTTTG 467



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)

Query: 936  NRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKD-LKRVRFSRKKFSEKQAEQWWAANR 994
             RT  +  A   EWVE+ E GV++T+          L+RVRFS+ KFS+  A+ WW  +R
Sbjct: 988  TRTPDSAAAATREWVEEVEPGVFLTIATHGSSAAHVLRRVRFSKSKFSDGNAQAWWEQHR 1047

Query: 995  ARVYQQYNVSMV 1006
            AR+ +   + +V
Sbjct: 1048 ARIIRARGLKLV 1059



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 236 QNIACGGRHAALVTKQGE-VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           + IA G  HA  + + GE +FSWG    G LGH    D   P+ ++AL    V  VACG 
Sbjct: 560 EAIASGEWHAVAIGRGGEKMFSWGRGRRGALGHAGGRDEHAPRAVEALAGRRVHHVACGP 619

Query: 295 HHTCAVTLSGDM 306
             T AV  S  M
Sbjct: 620 ESTAAVVSSRSM 631


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2962 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V+S GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3072 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGT----------RDAQTLALTDEGLVFSW 3178

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3297

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4015

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4016 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4073

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4074 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4132

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4133 QLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4181 RGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4241 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4299

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4300 LQGKKVNRVACGSAHTLA 4317



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3012 GKVYSCGEAT-NGRLGLGMS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3062

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3123 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGTRDAQTLALTDEGLVFSWG 3179

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3227

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3288 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4058 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4107

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT 4167

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGSKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4227 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4274

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4321

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4322 --KPASAGKLPAQV--PMEYNHLQEI 4343



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 167/333 (50%), Gaps = 22/333 (6%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 3017 CG--EATNGRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 3121

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 3122 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDG 3181

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGH
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P +VE L+ K++  +  G     A+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4014 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4071 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4118

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4179 LGRGGSDGSKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGS 4260



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L ++ V  VAC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---- 475

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                         +  P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 476 --------QAYNSDMLAPQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLG G
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 141/298 (47%), Gaps = 29/298 (9%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           + H DG       + G+V+ WG C   G LG G         V + +F  K     VV  
Sbjct: 500 AAHSDGHHYLALAATGEVYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV-- 555

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
             +IACG  ++A +T +GE+++WG    GRLGHG   D + P L+  LK + V  VAC  
Sbjct: 556 --HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 613

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+  T AVT +G +++WG  + ++G LG G       PK +   L+ + V  V CG   +
Sbjct: 614 GDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFS 670

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  GQ++++G G    LG G    V  P+ ++ L+G + +  A G  H  A+ E   
Sbjct: 671 IALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE--- 727

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      ++ +WG  D+ +     +  +  PT +  L   +   ++CG + + A
Sbjct: 728 ---------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFA 776



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3132

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3133 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDF 3183

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3241

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3242 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK+++ G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3113

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CGT     + L    
Sbjct: 3114 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEG 3173

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 107/222 (48%), Gaps = 14/222 (6%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4003

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4004 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2954 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3003

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3004 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3063

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3064 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3120

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3121 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3170

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3171 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3230

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3231 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3289

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3290 NRKPTLVQGLEGQKITRVACGSSHSVA 3316



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/307 (35%), Positives = 160/307 (52%), Gaps = 21/307 (6%)

Query: 273  VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP 330
            VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G LGHGN      P
Sbjct: 3967 VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKLGHGNRSPCDRP 4024

Query: 331  KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK 390
            + +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D      P+ V++L+
Sbjct: 4025 RVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQ 4083

Query: 391  GLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPT 448
            G R V  ACG               + + C      +++WGDGD G+LG G  +   VP 
Sbjct: 4084 GHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPM 4131

Query: 449  CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTK 507
             + +L      +V CG   +VALT +G VYT G   Y +LG    +  + P +V+G   K
Sbjct: 4132 KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 4191

Query: 508  NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
              +  IA G  H    T   EVYTWG    G+LG G T+    P LV AL+ K+V  + C
Sbjct: 4192 KVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVAC 4250

Query: 568  GTSFTAA 574
            G++ T A
Sbjct: 4251 GSAHTLA 4257



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3004 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3054

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3055 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3114

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3115 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3171

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3172 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3219

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3220 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3279

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3280 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3319



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 147/300 (49%), Gaps = 19/300 (6%)

Query: 224  PKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
            P  +ES   + ++ +A   GG+H   ++ +GEV+SWGE   G+LGHG  S    P++I++
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4029

Query: 282  LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            L+ I V  VA G  H+  VT +GD+YTWG     +G LGH +      PK +   L+G  
Sbjct: 4030 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKG--RYGRLGHSDSEDQLKPKLVEA-LQGHR 4086

Query: 342  VSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
            V  ++CG     T  +T    ++++GDG +G LG G       P ++DSL GL  V+  C
Sbjct: 4087 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4146

Query: 400  GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
            G   + A+ +            SG ++TWG GD  RLGHG  +    P  V  L      
Sbjct: 4147 GSQFSVALTK------------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4194

Query: 460  QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
             ++ G    V  T  G VYT G    GQLGD   N     R+   L    V  +ACG  H
Sbjct: 4195 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4254



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 3998 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4047

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4048 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4107

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4108 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4166

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4167 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4214

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4215 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4261

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4262 --KPASAGKLPAQV--PMEYNHLQEI 4283



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2937 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2994

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 2995 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3051

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3052 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3108

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3109 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3159

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3160 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3218

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3219 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3265



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 157/332 (47%), Gaps = 32/332 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
             +  P  +  L   +   ++CG + + A ++
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFAWSS 778



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3067 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3124

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3125 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3175

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3176 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3233

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3234 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3292

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3293 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3326



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2987 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3046

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3047 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3105

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3106 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3165

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3166 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3194



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 10/148 (6%)

Query: 461  VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
            V+ G    +AL++ G VY+ G    G+LG    +     RV   L    V ++A G  H 
Sbjct: 3986 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4045

Query: 521  AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK- 579
            A +T+  ++YTWGKG  GRLGH D++D+  P LVEAL+  +V  I CG+     +CL   
Sbjct: 4046 ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4105

Query: 580  -----WVSG----VDQSMCSGCRIPFNF 598
                 W  G    + +    GC++P   
Sbjct: 4106 DTVWSWGDGDYGKLGRGGSDGCKVPMKI 4133


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
            harrisii]
          Length = 4865

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/412 (32%), Positives = 203/412 (49%), Gaps = 37/412 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  +P A  S      Q + CG     ++  
Sbjct: 4002 DVYLWGA-----------GRHGQLAEAGRNVMIPAAAPS--FSQAQQVICGQNCTFVIQA 4048

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4049 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4108

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4109 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVIQMSCGFKHSAVVTSDGKLFTFGNG 4165

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4166 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4214

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4215 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4274

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4275 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4333

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNF 598
                P+L+  L+ K ++ I  G   +AA     W +        G  +P   
Sbjct: 4334 HVREPTLITVLQGKNIRQISAGRCHSAA-----WTASPVPPRAPGVSVPLQL 4380



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A V+  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A++ 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           + +  +S G  H+   T+
Sbjct: 718 VAIQQISAGTSHSLAWTA 735


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2961 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3071 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3177

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3985 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4044

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4045 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4102

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4103 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4161

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4162 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4209

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4210 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4269

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4270 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4328

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4329 LQGKKVNRVACGSAHTLA 4346



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3011 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3061

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3122 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3178

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3179 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3226

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3287 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4087 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4136

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4137 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4196

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4197 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4255

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4256 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4303

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4304 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4350

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4351 --KPASAGKLPAQV--PMEYNHLQEI 4372



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2944 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3002 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4042

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4043 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4099

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4100 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4147

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4148 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4207

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4208 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4266

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4267 HVRRPRQVQGLQGKKVIAIATGS 4289



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFA 775



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3074 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3131

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3132 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3240

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3241 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3112

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3113 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3172

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3173 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3982 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4032

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4033 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4089

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4090 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4149

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4150 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4209

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4210 RGGSDGCKVPMKI 4222


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  190 bits (483), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2961 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3071 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3177

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4013

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4071

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4072 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4131 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4239 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4298 LQGKKVNRVACGSAHTLA 4315



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3011 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3061

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3122 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3178

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3179 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3226

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3287 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4056 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4105

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4165

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4320 --KPASAGKLPAQV--PMEYNHLQEI 4341



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2944 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3002 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4012 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4116

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4177 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGS 4258



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFA 775



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3074 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3131

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3132 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3240

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3241 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3112

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3113 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3172

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3173 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4179 RGGSDGCKVPMKI 4191


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2961 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3071 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3177

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4013

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4071

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4072 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4131 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4239 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4298 LQGKKVNRVACGSAHTLA 4315



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3011 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3061

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3122 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3178

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3179 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3226

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3287 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4056 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4105

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4165

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4320 --KPASAGKLPAQV--PMEYNHLQEI 4341



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2944 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3002 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4012 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4116

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4177 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGS 4258



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 157/332 (47%), Gaps = 32/332 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
             +  P  +  L   +   ++CG + + A ++
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFAWSS 778



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3074 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3131

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3132 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3240

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3241 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3112

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3113 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3172

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3173 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4179 RGGSDGCKVPMKI 4191


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2960 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3009

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3010 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3069

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3070 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3126

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3127 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3176

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3177 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3236

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3237 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3295

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3296 NRKPTLVQGLEGQKITRVACGSSHSVA 3322



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 189/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3955 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGA 4014

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4015 GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4072

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L G  V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4073 GHGNRSPCDRPRVIES-LRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4131

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4132 QLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4179

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4180 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4239

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    +   EVYTWG    G+LG G T+    P LV A
Sbjct: 4240 RPRQVQGLQGKKVI-AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4298

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4299 LQGKKVNRVACGSAHTLA 4316



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3010 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3060

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3061 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3120

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3121 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3177

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3178 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3225

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 3226 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3285

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3286 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3325



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2943 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3000

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3001 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3057

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3058 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3114

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3115 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3165

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3166 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3224

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3225 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3271



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 160/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES    +V ++A GG H+A 
Sbjct: 4057 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGTEVVDVAAGGAHSAC 4106

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  VACG      + L+ D  
Sbjct: 4107 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT 4166

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4167 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4225

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4226 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSE------------DGEVYT 4273

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4274 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4320

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4321 --KPASAGKLPVQV--PMEYNHLQEI 4342



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 480 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4012

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4013 GAGGRLGVGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4069

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G   V  A G  H+A V             ++G L+TWG
Sbjct: 4070 GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT------------AAGDLYTWG 4117

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 4118 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4177

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4178 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4236

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4237 HVRRPRQVQGLQGKKVIAIATGS 4259



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 156/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P+ +  L   +   ++CG + + A
Sbjct: 748 VTKPEPSALPGLDTKHIVGIACGPAQSFA 776



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3073 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3130

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3131 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3181

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3182 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3239

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 3240 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3298

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3299 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3332



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2993 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3052

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3053 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3111

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3112 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3171

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3172 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3200



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3952 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 4002

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4003 ---ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4059

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4060 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4119

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  + CG+     +CL        W  G    + 
Sbjct: 4120 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4179

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4180 RGGSDGCKVPMKI 4192


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3639 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 3685

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 3686 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3745

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 3746 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3802

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 3803 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 3851

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 3852 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 3911

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 3912 LPEGRARNHNRPQQIP-VLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 3970

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P++V  L+ K V+ I  G   +AA
Sbjct: 3971 HVREPTVVTGLQGKNVRQISAGRCHSAA 3998



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3639 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 3692

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 3693 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3749

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 3750 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 3797

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 3798 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 3857

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 3858 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 3917

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 3918 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 3947



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 3728 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 3787

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 3788 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 3844

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P+++D L G+   + ACG   + A+         
Sbjct: 3845 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 3904

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 3905 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 3964

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 3965 GLGHTNHVREPTVVTGLQGKNVRQISAGRCHSAAWT 4000



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P ++  L+
Sbjct: 3923 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTGLQ 3982

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 3983 GKNVRQISAGRCHSAAWT 4000


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2961 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3071 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3177

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4013

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4071

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4072 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4131 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4239 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4298 LQGKKVNRVACGSAHTLA 4315



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3011 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3061

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3122 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3178

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3179 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3226

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3287 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4056 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4105

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4165

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4320 --KPASAGKLPAQV--PMEYNHLQEI 4341



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2944 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3002 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4012 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4116

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4177 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGS 4258



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFA 775



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3074 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3131

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3132 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3240

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3241 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3112

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3113 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3172

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3173 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4179 RGGSDGCKVPMKI 4191


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2939 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2988

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 2989 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3048

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3049 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3105

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3106 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3155

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3156 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3215

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3216 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3274

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3275 NRKPTLVQGLEGQKITRVACGSSHSVA 3301



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3934 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3993

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3994 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4051

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4052 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4110

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4111 QLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4158

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4159 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4218

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4219 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4277

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4278 LQGKKVNRVACGSAHTLA 4295



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2989 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3039

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3040 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3099

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3100 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3156

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3157 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3204

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 3205 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3264

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3265 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3304



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4036 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4085

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  VACG      + L+ D  
Sbjct: 4086 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT 4145

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4146 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4204

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4205 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4252

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4253 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4299

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4300 --KPASAGKLPAQV--PMEYNHLQEI 4321



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2922 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2979

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 2980 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3036

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3037 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3093

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3094 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3144

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3145 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3203

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3204 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3250



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3991

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3992 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4048

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4049 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4096

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 4097 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4156

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4157 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4215

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4216 HVRRPRQVQGLQGKKVIAIATGS 4238



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 402 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 456

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      I +++ S G  H   + + G+++++G G  G
Sbjct: 457 SDTLA------------PQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 503

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 504 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 551

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 552 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 611

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 612 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 670

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 671 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 711



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 447 NGRV-YTQAYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 504

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 505 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 559

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 560 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 617

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 618 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 676

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 677 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 724

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 725 VTKPEPAALPGLDTKHIVGIACGPAQSFA 753



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3052 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3109

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3110 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3160

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3161 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3218

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 3219 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3277

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3278 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3311



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2972 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3031

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3032 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3090

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3091 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3150

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3151 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3179



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3931 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3981

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3982 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4039 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4098

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  + CG+     +CL        W  G    + 
Sbjct: 4099 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4158

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4159 RGGSDGCKVPMKI 4171


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2961 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3071 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3177

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4013

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4071

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4072 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4131 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4239 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4298 LQGKKVNRVACGSAHTLA 4315



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3011 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3061

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3122 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3178

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3179 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3226

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3287 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4056 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4105

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4165

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4320 --KPASAGKLPAQV--PMEYNHLQEI 4341



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2944 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3002 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4012 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4116

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4177 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGS 4258



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFA 775



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3074 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3131

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3132 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3240

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3241 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3112

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3113 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3172

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3173 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4179 RGGSDGCKVPMKI 4191


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2961 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3071 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3177

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4013

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4071

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4072 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4131 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4239 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4298 LQGKKVNRVACGSAHTLA 4315



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3011 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3061

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3122 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3178

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3179 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3226

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3287 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4056 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4105

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4165

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4320 --KPASAGKLPAQV--PMEYNHLQEI 4341



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2944 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3002 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4012 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4116

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4177 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGS 4258



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFA 775



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3074 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3131

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3132 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3240

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3241 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3112

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3113 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3172

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3173 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4179 RGGSDGCKVPMKI 4191


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2961 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3071 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3177

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4013

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4071

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4072 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4131 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4239 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4298 LQGKKVNRVACGSAHTLA 4315



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3011 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3061

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3122 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3178

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3179 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3226

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3287 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4056 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4105

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4165

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4320 --KPASAGKLPAQV--PMEYNHLQEI 4341



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2944 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3002 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4012 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4116

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4177 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGS 4258



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFA 775



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3074 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3131

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3132 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3240

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3241 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3112

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3113 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3172

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3173 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4179 RGGSDGCKVPMKI 4191


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 3028 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3077

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V+S GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3078 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3137

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3138 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3194

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3195 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3244

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3245 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3304

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3305 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3363

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3364 NRKPTLVQGLEGQKITRVACGSSHSVA 3390



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 4022 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4081

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4082 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4139

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4140 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4198

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4199 QLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4246

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4247 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4306

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4307 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4365

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4366 LQGKKVNRVACGSAHTLA 4383



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3078 GKVYSCGEAT-NGRLGLGMS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3128

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3129 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3188

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3189 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3245

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3246 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3293

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3294 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3353

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3354 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3393



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4124 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4173

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4174 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT 4233

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4234 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4292

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4293 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4340

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4341 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4387

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4388 --KPASAGKLPAQV--PMEYNHLQEI 4409



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 167/333 (50%), Gaps = 22/333 (6%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y+
Sbjct: 3023 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3082

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 3083 CG--EATNGRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3139

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 3140 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 3187

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 3188 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3247

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGH
Sbjct: 3248 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3306

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P +VE L+ K++  +  G     A+
Sbjct: 3307 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3339



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4079

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4080 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4136

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4137 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4184

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4185 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4244

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4245 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4303

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4304 HVRRPRQVQGLQGKKVIAIATGS 4326



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 163/341 (47%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L ++ V  VAC E     ++ +G +YT    
Sbjct: 493 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---- 543

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                         +  P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 544 --------QAYNSDMLAPQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 594

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 595 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 642

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 643 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 702

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 703 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 761

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 762 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 802



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 29/298 (9%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           + H DG       + G+V+ WG C   G LG G         V + +F  K     VV  
Sbjct: 568 AAHSDGHHYLALAATGEVYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV-- 623

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
             +IACG  ++A +T +GE+++WG    GRLGHG   D + P L+  LK + V  VAC  
Sbjct: 624 --HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 681

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+  T AVT +G +++WG  + ++G LG G       PK +   L+ + V  V CG   +
Sbjct: 682 GDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFS 738

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  GQ++++G G    LGHG    V  P+ ++ L+G + +  A G  H  A+ E   
Sbjct: 739 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE--- 795

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      ++ +WG  D+ +     +  +  PT +  L   +   ++CG + + A
Sbjct: 796 ---------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFA 844



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3141 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3198

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3199 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3249

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3250 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3307

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3308 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3366

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3367 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3400



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK+++ G+   GRLG G     + +P  + AL      +V+  
Sbjct: 3061 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3120

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3121 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3179

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3180 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3239

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3240 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3268



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 4019 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4069

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4070 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4126

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4186

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4187 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4246

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4247 RGGSDGCKVPMKI 4259


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2961 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3071 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3177

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4013

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4071

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4072 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4131 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4239 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4298 LQGKKVNRVACGSAHTLA 4315



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3011 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3061

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3122 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3178

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3179 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3226

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3287 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4056 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4105

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4165

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4320 --KPASAGKLPAQV--PMEYNHLQEI 4341



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2944 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3002 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4012 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4116

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4177 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGS 4258



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 157/332 (47%), Gaps = 32/332 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
             +  P  +  L   +   ++CG + + A ++
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFAWSS 778



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3074 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3131

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3132 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3240

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3241 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3112

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3113 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3172

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3173 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4179 RGGSDGCKVPMKI 4191


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2966 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3015

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3016 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3075

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3076 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3132

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3133 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3182

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3183 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3242

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3243 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3301

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3302 NRKPTLVQGLEGQKITRVACGSSHSVA 3328



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4076

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4077 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4135

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4136 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4184 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4243

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4244 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4302

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4303 LQGKKVNRVACGSAHTLA 4320



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3016 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3066

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3067 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3126

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3127 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3183

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3184 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3231

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3232 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3291

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3292 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3331



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4061 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4110

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4111 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4170

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4229

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4230 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4277

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4278 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4324

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4325 --KPASAGKLPAQV--PMEYNHLQEI 4346



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2949 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3006

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3007 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3063

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3064 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3120

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3121 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3171

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3172 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3230

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3231 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3277



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4017 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4121

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4122 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4182 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATGS 4263



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 370 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 424

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 425 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 471

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 472 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 519

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 520 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 579

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 580 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 638

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 639 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 679



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 415 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 472

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 473 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 527

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 528 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 585

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 586 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 644

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 645 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 692

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 693 VTKPEPAALPGLDTKHIVGIACGPAQSFA 721



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3079 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3136

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3137 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3187

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3188 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3245

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3246 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3304

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3305 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3338



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2999 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3058

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3059 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3117

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3118 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3177

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3178 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3206



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4006

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4007 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4123

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4124 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4184 RGGSDGCKVPMKI 4196


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2962 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3072 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3178

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3297

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3957 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4016

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4017 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4074

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4075 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4133

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4134 QLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4181

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4182 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4241

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4242 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4300

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4301 LQGKKVNRVACGSAHTLA 4318



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3012 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3062

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3123 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3227

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3288 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4059 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4108

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  VACG      + L+ D  
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT 4168

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4169 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4228 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4275

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4276 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4322

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4323 --KPASAGKLPAQV--PMEYNHLQEI 4344



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2945 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3003 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3059

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3116

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3117 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3226

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4015 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4072 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4119

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4179

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4180 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGS 4261



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      I +++ S G  H   + + G+++++G G  G
Sbjct: 480 SDTLA------------PQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 748 VTKPEPAALPGLDTKHIVGIACGPAQSFA 776



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3132

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3133 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3241

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 3242 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3113

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3114 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4004

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4005 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  + CG+     +CL        W  G    + 
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4182 RGGSDGCKVPMKI 4194


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2905 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2954

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V+S GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3014

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3015 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3071

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3072 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3121

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3122 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3181

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3182 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3240

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3241 NRKPTLVQGLEGQKITRVACGSSHSVA 3267



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3899 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3958

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3959 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4016

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4017 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4075

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4076 QLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4123

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4124 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4183

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4184 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4242

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4243 LQGKKVNRVACGSAHTLA 4260



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2955 GKVYSCGEAT-NGRLGLGM-SSGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3005

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3006 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3065

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3066 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3122

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3123 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3170

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3171 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3230

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3231 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3270



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4001 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4050

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4051 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT 4110

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4111 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4169

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4170 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4217

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4218 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4264

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4265 --KPASAGKLPAQV--PMEYNHLQEI 4286



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 167/333 (50%), Gaps = 22/333 (6%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y+
Sbjct: 2900 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 2959

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 2960 CG--EATNGRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3016

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 3017 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 3064

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 3065 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3124

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGH
Sbjct: 3125 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3183

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P +VE L+ K++  +  G     A+
Sbjct: 3184 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3216



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3956

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3957 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4013

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4014 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4061

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4062 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4121

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4122 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4180

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4181 HVRRPRQVQGLQGKKVIAIATGS 4203



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 163/341 (47%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L ++ V  VAC E     ++ +G +YT    
Sbjct: 370 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---- 420

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                         +  P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 421 --------QAYNSDMLAPQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 471

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 472 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 519

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 520 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 579

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 580 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 638

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 639 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 679



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 29/298 (9%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           + H DG       + G+V+ WG C   G LG G         V + +F  K     VV  
Sbjct: 445 AAHSDGHHYLALAATGEVYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV-- 500

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
             +IACG  ++A +T +GE+++WG    GRLGHG   D + P L+  LK + V  VAC  
Sbjct: 501 --HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 558

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+  T AVT +G +++WG  + ++G LG G       PK +   L+ + V  V CG   +
Sbjct: 559 GDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFS 615

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  GQ++++G G    LGHG    V  P+ ++ L+G + +  A G  H  A+ E   
Sbjct: 616 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE--- 672

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      ++ +WG  D+ +     +  +  PT +  L   +   ++CG + + A
Sbjct: 673 ---------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFA 721



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3018 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3075

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3076 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3126

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3127 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3184

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3185 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3243

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3244 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3277



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK+++ G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2938 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 2997

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 2998 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3056

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3057 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3116

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3117 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3145



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3896 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3946

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3947 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4003

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4063

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4064 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4123

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4124 RGGSDGCKVPMKI 4136


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2962 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V+S GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3072 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3178

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3297

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4015

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4016 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4073

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4074 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4132

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4133 QLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4241 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4299

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4300 LQGKKVNRVACGSAHTLA 4317



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3012 GKVYSCGEAT-NGRLGLGMS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3062

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3123 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3227

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3288 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4058 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4107

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT 4167

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4227 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4274

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4321

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4322 --KPASAGKLPAQV--PMEYNHLQEI 4343



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 167/333 (50%), Gaps = 22/333 (6%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 3017 CG--EATNGRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 3121

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 3122 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGH
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P +VE L+ K++  +  G     A+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4014 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4071 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4118

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4179 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGS 4260



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 163/341 (47%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L ++ V  VAC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---- 475

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                         +  P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 476 --------QAYNSDMLAPQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 29/298 (9%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           + H DG       + G+V+ WG C   G LG G         V + +F  K     VV  
Sbjct: 500 AAHSDGHHYLALAATGEVYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV-- 555

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
             +IACG  ++A +T +GE+++WG    GRLGHG   D + P L+  LK + V  VAC  
Sbjct: 556 --HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 613

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+  T AVT +G +++WG  + ++G LG G       PK +   L+ + V  V CG   +
Sbjct: 614 GDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFS 670

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  GQ++++G G    LGHG    V  P+ ++ L+G + +  A G  H  A+ E   
Sbjct: 671 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE--- 727

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      ++ +WG  D+ +     +  +  PT +  L   +   ++CG + + A
Sbjct: 728 ---------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFA 776



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3132

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3133 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3241

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3242 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK+++ G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3113

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3114 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4003

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4004 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4181 RGGSDGCKVPMKI 4193


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2967 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3016

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V+S GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3017 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3076

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3077 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3133

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3134 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3183

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3184 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3243

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3244 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3302

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3303 NRKPTLVQGLEGQKITRVACGSSHSVA 3329



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3961 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4020

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4021 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4078

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4079 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4137

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4138 QLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4185

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4186 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4245

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4246 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4304

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4305 LQGKKVNRVACGSAHTLA 4322



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3017 GKVYSCGEAT-NGRLGLGMS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3067

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3068 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3127

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3128 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3184

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3185 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3232

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3233 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3292

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3293 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3332



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4063 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4112

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4113 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT 4172

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4173 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4231

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4232 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4279

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4280 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4326

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4327 --KPASAGKLPAQV--PMEYNHLQEI 4348



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 167/333 (50%), Gaps = 22/333 (6%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y+
Sbjct: 2962 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3021

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 3022 CG--EATNGRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3078

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 3079 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 3126

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 3127 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3186

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGH
Sbjct: 3187 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3245

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P +VE L+ K++  +  G     A+
Sbjct: 3246 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3278



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4018

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4019 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4075

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4076 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4123

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4124 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4183

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4184 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4242

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4243 HVRRPRQVQGLQGKKVIAIATGS 4265



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 163/341 (47%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L ++ V  VAC E     ++ +G +YT    
Sbjct: 430 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---- 480

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                         +  P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 481 --------QAYNSDMLAPQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 531

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 532 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 579

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 580 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 639

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 640 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 698

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 699 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 739



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 29/298 (9%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           + H DG       + G+V+ WG C   G LG G         V + +F  K     VV  
Sbjct: 505 AAHSDGHHYLALAATGEVYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV-- 560

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
             +IACG  ++A +T +GE+++WG    GRLGHG   D + P L+  LK + V  VAC  
Sbjct: 561 --HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 618

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+  T AVT +G +++WG  + ++G LG G       PK +   L+ + V  V CG   +
Sbjct: 619 GDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFS 675

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  GQ++++G G    LGHG    V  P+ ++ L+G + +  A G  H  A+ E   
Sbjct: 676 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE--- 732

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      ++ +WG  D+ +     +  +  PT +  L   +   ++CG + + A
Sbjct: 733 ---------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFA 781



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3080 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3137

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3138 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3188

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3189 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3246

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3247 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3305

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3306 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3339



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK+++ G+   GRLG G     + +P  + AL      +V+  
Sbjct: 3000 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3059

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3060 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3118

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3119 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3178

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3179 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3207



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3958 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4008

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4009 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4065

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4066 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4125

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4126 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4185

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4186 RGGSDGCKVPMKI 4198


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2961 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3071 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3177

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  174 bits (441), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4013

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4071

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4072 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4131 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4239 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4298 LQGKKVNRVACGSAHTLA 4315



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3011 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3061

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3122 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3178

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3179 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3226

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3287 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4056 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4105

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4165

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4320 --KPASAGKLPAQV--PMEYNHLQEI 4341



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2944 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3002 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4012 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4116

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4177 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGS 4258



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFA 775



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3074 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3131

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3132 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3240

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3241 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3112

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3113 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3172

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3173 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4179 RGGSDGCKVPMKI 4191


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2962 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3072 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3178

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3297

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 189/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3957 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGA 4016

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4017 GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4074

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L G  V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4075 GHGNRSPCDRPRVIES-LRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4133

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4134 QLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4181

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4182 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4241

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    +   EVYTWG    G+LG G T+    P LV A
Sbjct: 4242 RPRQVQGLQGKKVI-AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4300

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4301 LQGKKVNRVACGSAHTLA 4318



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3012 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3062

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3123 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3227

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3288 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2945 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3003 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3059

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3116

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3117 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3226

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 160/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES    +V ++A GG H+A 
Sbjct: 4059 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGTEVVDVAAGGAHSAC 4108

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  VACG      + L+ D  
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT 4168

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4169 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4228 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSE------------DGEVYT 4275

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4276 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4322

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4323 --KPASAGKLPVQV--PMEYNHLQEI 4344



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 480 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4014

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4015 GAGGRLGVGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G   V  A G  H+A V             ++G L+TWG
Sbjct: 4072 GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT------------AAGDLYTWG 4119

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4179

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4180 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGS 4261



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 156/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P+ +  L   +   ++CG + + A
Sbjct: 748 VTKPEPSALPGLDTKHIVGIACGPAQSFA 776



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3132

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3133 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3241

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 3242 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3113

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3114 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 4004

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4005 ---ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4121

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  + CG+     +CL        W  G    + 
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4182 RGGSDGCKVPMKI 4194


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2969 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3018

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3019 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3078

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3079 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3135

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3136 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3185

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3186 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3245

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3246 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3304

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3305 NRKPTLVQGLEGQKITRVACGSSHSVA 3331



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 189/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3964 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4023

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4024 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4081

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4082 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4140

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G   V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4141 QLKPKLVEALQGHHVVDVACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4188

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4189 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4248

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4249 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4307

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4308 LQGKKVNRVACGSAHTLA 4325



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3019 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3069

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3070 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3129

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3130 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3186

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3187 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3234

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 3235 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3294

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3295 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3334



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 162/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4066 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4115

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+  +V  VACG      + L+ D  
Sbjct: 4116 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDT 4175

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4176 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4234

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4235 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4282

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4283 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4329

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4330 --KPASAGKLPAQV--PMEYNHLQEI 4351



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2952 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3009

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3010 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3066

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3067 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3123

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3124 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3174

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3175 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3233

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3234 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3280



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 158/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4021

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4022 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4078

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4079 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4126

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL   +   V+CG   + T+ LT    V++ G   YG+
Sbjct: 4127 KGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4186

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4187 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4245

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4246 HVRRPRQVQGLQGKKVIAIATGS 4268



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 480 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 748 VTKPEPAALPGLDTKHIVGIACGPAQSFA 776



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3082 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3139

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3140 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3190

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3191 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3248

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 3249 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3307

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3308 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3341



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 3002 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3061

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3062 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3120

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3121 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3180

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3181 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3209



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 115/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3961 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4011

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4012 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4068

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4069 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4128

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+   V  + CG+     +CL        W  G    + 
Sbjct: 4129 RYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4188

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4189 RGGSDGCKVPMKI 4201


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2250 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2299

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 2300 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2359

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 2360 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2416

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 2417 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 2466

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 2467 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2526

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 2527 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 2585

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 2586 NRKPTLVQGLEGQKITRVACGSSHSVA 2612



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3243 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3302

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3303 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 3360

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 3361 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 3419

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 3420 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 3467

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 3468 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3527

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 3528 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 3586

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 3587 LQGKKVNRVACGSAHTLA 3604



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2300 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 2350

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 2351 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 2410

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 2411 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 2467

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 2468 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 2515

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 2516 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 2575

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 2576 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2615



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 3345 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 3394

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 3395 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 3454

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 3455 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3513

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 3514 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 3561

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 3562 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 3608

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 3609 --KPASAGKLPAQV--PMEYNHLQEI 3630



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2233 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2290

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 2291 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 2347

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 2348 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 2404

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 2405 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2455

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 2456 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 2514

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 2515 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2561



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3300

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3301 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3357

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 3358 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 3405

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 3406 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 3465

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 3466 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3524

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 3525 HVRRPRQVQGLQGKKVIAIATGS 3547



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 2363 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 2420

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 2421 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2471

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 2472 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 2529

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 2530 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 2588

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 2589 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 2622



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2283 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2342

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 2343 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 2401

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 2402 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 2461

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 2462 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 2490



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3240 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3290

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3291 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3347

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 3348 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3407

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 3408 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3467

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 3468 RGGSDGCKVPMKI 3480


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2962 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3072 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3178

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3297

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 189/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGA 4015

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4016 GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4073

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L G  V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4074 GHGNRSPCDRPRVIES-LRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4132

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4133 QLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    +   EVYTWG    G+LG G T+    P LV A
Sbjct: 4241 RPRQVQGLQGKKVI-AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4299

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4300 LQGKKVNRVACGSAHTLA 4317



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3012 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3062

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3123 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3227

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3288 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2945 IRRKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3003 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3059

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3116

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3117 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3226

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 160/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES    +V ++A GG H+A 
Sbjct: 4058 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGTEVVDVAAGGAHSAC 4107

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  VACG      + L+ D  
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT 4167

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4227 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSE------------DGEVYT 4274

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4321

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4322 --KPASAGKLPVQV--PMEYNHLQEI 4343



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 480 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4014 GAGGRLGVGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G   V  A G  H+A V             ++G L+TWG
Sbjct: 4071 GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT------------AAGDLYTWG 4118

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4179 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGS 4260



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 156/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P+ +  L   +   ++CG + + A
Sbjct: 748 VTKPEPSALPGLDTKHIVGIACGPAQSFA 776



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3132

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3133 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3241

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 3242 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3113

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3114 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 4003

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4004 ---ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  + CG+     +CL        W  G    + 
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4181 RGGSDGCKVPMKI 4193


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2962 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3072 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3178

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3297

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 189/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3957 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4016

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4017 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4074

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4075 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4133

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G   V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4134 QLKPKLVEALQGHHVVDVACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4181

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4182 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4241

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4242 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4300

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4301 LQGKKVNRVACGSAHTLA 4318



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3012 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3062

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3123 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3227

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3288 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 162/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4059 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4108

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+  +V  VACG      + L+ D  
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDT 4168

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4169 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4228 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4275

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4276 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4322

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4323 --KPASAGKLPAQV--PMEYNHLQEI 4344



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2945 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 3003 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3059

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3116

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3117 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3226

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 158/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4015 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4072 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4119

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL   +   V+CG   + T+ LT    V++ G   YG+
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4179

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4180 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGS 4261



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 480 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 748 VTKPEPAALPGLDTKHIVGIACGPAQSFA 776



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3132

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3133 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3241

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 3242 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3113

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3114 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 115/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4004

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4005 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+   V  + CG+     +CL        W  G    + 
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4182 RGGSDGCKVPMKI 4194


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2956 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3005

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3006 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3065

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3066 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3122

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3123 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3172

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3173 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3232

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3233 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3291

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3292 NRKPTLVQGLEGQKITRVACGSSHSVA 3318



 Score =  174 bits (441), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3949 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4008

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4009 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4066

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4067 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4125

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4126 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4173

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4174 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4233

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4234 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4292

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4293 LQGKKVNRVACGSAHTLA 4310



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3006 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3056

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3057 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3116

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3117 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3173

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3174 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3221

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3222 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3281

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3282 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3321



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4051 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4100

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4101 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4160

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4161 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4219

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4220 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4267

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4268 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4314

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4315 --KPASAGKLPAQV--PMEYNHLQEI 4336



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2939 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2996

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 2997 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3053

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 3054 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3110

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 3111 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3161

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 3162 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3220

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3221 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3267



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4006

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4007 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4063

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4064 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4111

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4112 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4171

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4172 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4230

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4231 HVRRPRQVQGLQGKKVIAIATGS 4253



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFA 775



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3069 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3126

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3127 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3177

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3178 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3235

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3236 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3294

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3295 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3328



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2989 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3048

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3049 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3107

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3108 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3167

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3168 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3196



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3946 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3996

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3997 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4053

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4054 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4113

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4114 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4173

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4174 RGGSDGCKVPMKI 4186


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 200/390 (51%), Gaps = 29/390 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            V++WG    D +        G   G K+   +P   E    L   +IA G +   +V+++
Sbjct: 2936 VYVWGLNDKDQL--------GGLKGSKIK--LPVYSEVLSKLKPVHIAGGSKTLFVVSQE 2985

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ GE   GRLG G DS+V  PK I  L    ++ V+   G  H  A+T  G +++W
Sbjct: 2986 GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSW 3045

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN +SL  P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3046 GEGED---GKLGHGNSISLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGE 3101

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  + S P+ V SL G R ++ ACG             + + +  + G +++W
Sbjct: 3102 YGRLGHGDTATQSKPKLVQSLVGQRIIQIACG----------SRDAQTMALTADGLVYSW 3151

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +    P  +  L      Q+ CG   ++ALT  G V+T G   Y +L
Sbjct: 3152 GDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRL 3211

Query: 489  GDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G    +  + PT VEG   K  +  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3212 GHGNDHHVRKPTLVEGLRGKKVI-HVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIV 3270

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
               PSLV  L D +V  + CG+S + A  L
Sbjct: 3271 NKKPSLVHELDDARVNRVSCGSSHSIAWVL 3300



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 192/392 (48%), Gaps = 29/392 (7%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            D  G ++ WG     G LGG         G K+   +P   ES   L    +  G +   
Sbjct: 3950 DGSGAIYGWGH-NHRGQLGG-------LEGAKVK--LPVLCESLSALRPVQLTGGEQTLF 3999

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSG 304
             VT  G+V++ G    GRLG G    V  P L+++++++ V+ VA   G  H  A++  G
Sbjct: 4000 AVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4059

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
             +Y+WG  +   G LGHGN +S   PK +   L G  +  ++CG  H+A +TSAG L+T+
Sbjct: 4060 HVYSWGEGD--DGKLGHGNRLSYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYTW 4116

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG- 423
            G G +G LGHGD     TP+ +++L+  + +  ACG               + + C +  
Sbjct: 4117 GKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG------------SGDAQTLCVTDD 4164

Query: 424  -KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
              +++WGDGD G+LG G  +   +P  + +L      +V CG   +VALT +G +YT G 
Sbjct: 4165 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGK 4224

Query: 483  PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
              Y +LG    +     R    L    +  IA G  H    T + EV+TWG    G+LG 
Sbjct: 4225 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGD 4284

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G T     P LV AL+ K++  + CG++ T A
Sbjct: 4285 GTTSALQRPRLVHALQGKKITRVACGSAHTLA 4316



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/286 (35%), Positives = 148/286 (51%), Gaps = 27/286 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+ WGE   DG LG G   S            PK +E  +  ++ +IACGG H+A +T
Sbjct: 4059 GHVYSWGE-GDDGKLGHGNRLSYDR---------PKLIEELLGTEIVDIACGGHHSAAIT 4108

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
              G +++WG+   GRLGHG   D   PKLI+AL++  V  VAC  G+  T  VT   +++
Sbjct: 4109 SAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4168

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LG G      +P K+   L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4169 SWG--DGDYGKLGRGGSDGCKIPMKIES-LAGLGVVKVECGSQFSVALTRSGAIYTWGKG 4225

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V +L+G + +  A G  H  A  +             G++FT
Sbjct: 4226 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTD------------KGEVFT 4273

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            WGD D G+LG G   A   P  V AL      +V+CG + T+A +T
Sbjct: 4274 WGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWST 4319



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 171/335 (51%), Gaps = 37/335 (11%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG     +LG+G     S P   D +  + ++ + C E     ++++G++Y     
Sbjct: 437 EVIAWGSV---KLGNG-----SSPFYYDTIAELGIKQLCCTERALMILSVNGNVY----- 483

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                ++ +G+E     P+++ G  E   I ++S S G  H   +T    ++++G+G  G
Sbjct: 484 -----MMYYGSETQY--PQRVYGFSEKPIIMIASHSDGT-HYLALTQDNSVYSWGNGDGG 535

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LGHGDR     P+ +++L        ACG  ++AA+             S+G+L+TWG 
Sbjct: 536 RLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAAL------------SSNGELYTWGR 583

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQL 488
           G+ GRLGHG+ +  ++PT V AL       V+CG   S T+ +T +G V++ G   YG+L
Sbjct: 584 GNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKL 643

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
           G    +G    ++  KL    V ++ CG    A LT+  EVYTWGKG   RLGHG+ D  
Sbjct: 644 GRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHV 703

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
            +P +++ LK K+VK +  G     A+   + + G
Sbjct: 704 RYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYG 738



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 136/259 (52%), Gaps = 18/259 (6%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G H   +T+   V+SWG   GGRLGHG  +    PKLI+AL   N+  +ACG  ++ A++
Sbjct: 514 GTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALS 573

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAG 359
            +G++YTWG    N+G LGHGN  ++ +P  L   L G  V  V+CG     T  VT++G
Sbjct: 574 SNGELYTWGRG--NYGRLGHGNSDNVMIP-TLVTALNGHMVVYVACGSGDSQTLCVTASG 630

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            +F++GDG +G LG G      TP+ VD L  +   +  CG            G  S++ 
Sbjct: 631 IVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCG------------GQFSAAL 678

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
            + G+++TWG G+  RLGHG+++    P  +  L      ++  G+   +ALT    +Y 
Sbjct: 679 TAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYG 738

Query: 480 MGSPVYGQLGDPKANGKLP 498
            G   YGQ+ DP     +P
Sbjct: 739 WGRNDYGQI-DPALGTVVP 756



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 147/287 (51%), Gaps = 27/287 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG G         + +D   P+ +ES     +++IACG  H+A +T
Sbjct: 3040 GKVFSWGEGE-DGKLGHG-------NSISLDK--PRLIESLKSKRIRDIACGSGHSAAIT 3089

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+++WG    GRLGHG  +  S PKL+ +L    +  +ACG  +  T A+T  G +Y
Sbjct: 3090 SSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVY 3149

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G     + P  ++  L G+ V  + CG   +  +T  G+++T+G G
Sbjct: 3150 SWG--DGDFGKLGRGGSDGCYTPLLIDR-LNGLGVVQIECGAQFSLALTKYGEVWTWGKG 3206

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG+   V  P  V+ L+G + +  A G  H  AV ++            G+++ 
Sbjct: 3207 DYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDI------------GQVYA 3254

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            WGD D G+ G+G       P+ V  L +    +VSCG S ++A   T
Sbjct: 3255 WGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3301



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 167/361 (46%), Gaps = 29/361 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P   ++   L ++ + C  R   +++  G V+         + +G  S+  +P+ +    
Sbjct: 452 PFYYDTIAELGIKQLCCTERALMILSVNGNVY--------MMYYG--SETQYPQRVYGFS 501

Query: 284 NINVELVACGEH--HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
              + ++A      H  A+T    +Y+WG  N + G LGHG+      PK +   +E  +
Sbjct: 502 EKPIIMIASHSDGTHYLALTQDNSVYSWG--NGDGGRLGHGDRAWYDEPKLIEALVEK-N 558

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ ++CG  ++A ++S G+L+T+G G +G LGHG+  +V  P  V +L G   V  ACG 
Sbjct: 559 ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACG- 617

Query: 402 WHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
                         S + C  +SG +F+WGDG+ G+LG G  +    P  V  L++ N  
Sbjct: 618 -----------SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 666

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
           +V CG   + ALT  G VYT G     +LG    +     ++   L    V+E+  G+ H
Sbjct: 667 KVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLH 726

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK 579
           V  LT    +Y WG+   G++          P+L   L  K V  + CG + + A C   
Sbjct: 727 VLALTEDQLIYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNVIGLACGPTQSFAWCTSA 786

Query: 580 W 580
           W
Sbjct: 787 W 787



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 26/255 (10%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   +SL  LR V+   G     AV          
Sbjct: 3952 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT--------- 4002

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GK++  G G  GRLG G  ++ +VPT + ++  V      V+ G    +AL++ G
Sbjct: 4003 ---ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4059

Query: 476  HVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            HVY+ G    G+LG   + +   P  +E  L    V+ IACG +H A +TS   +YTWGK
Sbjct: 4060 HVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWGK 4118

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG------V 584
            G  GRLGHGD++D+  P L+EAL+D +V  + CG+     +C+    + W  G      +
Sbjct: 4119 GRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4178

Query: 585  DQSMCSGCRIPFNFK 599
             +    GC+IP   +
Sbjct: 4179 GRGGSDGCKIPMKIE 4193



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 23/289 (7%)

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            SG +Y WG ++   G LG      + LP  L   L  +    ++ G      VT+ G+++
Sbjct: 3952 SGAIYGWGHNH--RGQLGGLEGAKVKLPV-LCESLSALRPVQLTGGEQTLFAVTADGKVY 4008

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC--GVWHTAAVVEVMVGSSSSSNC 420
              G G  G LG G   SV  P  ++S++ +   + A   G  H  A+             
Sbjct: 4009 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLAL------------S 4056

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            S G +++WG+GD G+LGHG++ +   P  +  L+      ++CG   + A+T+ G +YT 
Sbjct: 4057 SEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTW 4116

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANG 538
            G   YG+LG   +  +L  ++   L    V ++ACG  D     +T    V++WG G  G
Sbjct: 4117 GKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4176

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 583
            +LG G +D    P  +E+L    V  + CG+ F+ A+     ++ W  G
Sbjct: 4177 KLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKG 4225



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 92/190 (48%), Gaps = 12/190 (6%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GKL+  G+G  GRLG GD      P  +  L +    +VS   G    +ALT  G V++ 
Sbjct: 2986 GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSW 3045

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            G    G+LG   +      R+   L    + +IACG  H A +TS  E+YTWG G  GRL
Sbjct: 3046 GEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3105

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGT------SFTAAICLHKWVSG----VDQSMCS 590
            GHGDT  ++ P LV++L  +++  I CG+      + TA   ++ W  G    + +    
Sbjct: 3106 GHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSD 3165

Query: 591  GCRIPFNFKR 600
            GC  P    R
Sbjct: 3166 GCYTPLLIDR 3175



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 109/230 (47%), Gaps = 35/230 (15%)

Query: 139 ACGSVNS--LSSGG--------SDGRTGHLKGLSGDTFRVSLSSAVSSSSQ---GSGHDD 185
           ACGS  S  LSS G        + GR GH  G S +    +L +A++         G  D
Sbjct: 563 ACGSTYSAALSSNGELYTWGRGNYGRLGH--GNSDNVMIPTLVTALNGHMVVYVACGSGD 620

Query: 186 GDSL-----GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
             +L     G VF WG+     +  GG   S +          PK V+  + ++V  + C
Sbjct: 621 SQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKT----------PKIVDKLLDINVAKVYC 670

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           GG+ +A +T  GEV++WG+    RLGHG +  V +PK+ID LK   V+ +  G  H  A+
Sbjct: 671 GGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLAL 730

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 349
           T    +Y WG +  ++G +     +   +P+    P L G +V  ++CGP
Sbjct: 731 TEDQLIYGWGRN--DYGQIDPA--LGTVVPEPTLCPTLSGKNVIGLACGP 776


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 1609 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 1655

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 1656 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1715

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 1716 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 1772

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 1773 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 1821

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 1822 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 1881

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 1882 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 1940

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 1941 HVREPTLVTVLQGKNVRQISAGRCHSAA 1968



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 1609 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 1662

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 1663 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 1719

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 1720 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 1767

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 1768 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 1827

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 1828 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 1887

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 1888 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 1917



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 1698 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 1757

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 1758 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 1814

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 1815 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 1874

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 1875 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 1934

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 1935 GLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 1970



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 1893 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 1952

Query: 284  NINVELVACGEHHTCAVT 301
              NV  ++ G  H+ A T
Sbjct: 1953 GKNVRQISAGRCHSAAWT 1970


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2186 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2235

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 2236 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2295

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 2296 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2352

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 2353 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 2402

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 2403 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2462

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 2463 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 2521

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 2522 NRKPTLVQGLEGQKITRVACGSSHSVA 2548



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 188/378 (49%), Gaps = 23/378 (6%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3181 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGA 3240

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3241 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 3298

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 3299 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 3357

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ VD+L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 3358 QLKPKLVDALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 3405

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 3406 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3465

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T     YTWG    G+LG G T+    P LV A
Sbjct: 3466 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGS-YTWGDNDEGQLGDGTTNAIQRPRLVAA 3523

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 3524 LQGKKVNRVACGSAHTLA 3541



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2236 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 2286

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 2287 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 2346

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 2347 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 2403

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 2404 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 2451

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 2452 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 2511

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 2512 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2551



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 159/326 (48%), Gaps = 41/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 3283 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 3332

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL+DAL+   V  VACG      + L+ D  
Sbjct: 3333 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDT 3392

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 3393 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3451

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H                C+    +T
Sbjct: 3452 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC-------------CTEDGSYT 3498

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 3499 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 3545

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 3546 --KPASAGKLPAQV--PMEYNHLQEI 3567



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 166/333 (49%), Gaps = 22/333 (6%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y 
Sbjct: 2181 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2240

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 2241 CG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2297

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 2298 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 2345

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 2346 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2405

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGH
Sbjct: 2406 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2464

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P +VE L+ K++  +  G     A+
Sbjct: 2465 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2497



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 3238

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3239 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3295

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 3296 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 3343

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 3344 KGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 3403

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 3404 LGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3462

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 3463 HVRRPRQVQGLQGKKVIAIATGS 3485



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 135/280 (48%), Gaps = 16/280 (5%)

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A T+   ++ WG ++ +   LG      + +P   +  L  ++V  V+ G      VT  
Sbjct: 2179 AATIRTKVFVWGLNDKD--QLGGLKGSKIKVPS-FSETLSALNVVQVAGGSKSLFAVTVE 2235

Query: 359  GQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+++  G+ T G LG G    +V  PR++ +L      + A    H+        G  ++
Sbjct: 2236 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV---HSG-------GRHAT 2285

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
            +    GK+F+WG+GD G+LGH  +     P  + AL       ++CG S + ALT++G +
Sbjct: 2286 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 2345

Query: 478  YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKG 535
            YT G   YG+LG      +L  ++   L  + V ++ACG  D     LT    V++WG G
Sbjct: 2346 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2405

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              G+LG G ++  N P  +E L  + V  I CG  F+ A+
Sbjct: 2406 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2445



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 2299 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 2356

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 2357 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2407

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 2408 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 2465

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 2466 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 2524

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 2525 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 2558



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2219 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2278

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 2279 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 2337

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 2338 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 2397

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 2398 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 2426



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3178 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 3228

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3229 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3285

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 3286 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3345

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LV+AL+  +V  + CG+     +CL        W  G    + 
Sbjct: 3346 RYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3405

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 3406 RGGSDGCKVPMKI 3418


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2963 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3012

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3013 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3072

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3073 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3129

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3130 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3179

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3180 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3239

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3240 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3298

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3299 NRKPTLVQGLEGQKITRVACGSSHSVA 3325



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3958 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGA 4017

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4018 GGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4075

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4076 GHGNRSPCDRPRVVES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4134

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4135 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4182

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4183 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4242

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4243 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4301

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4302 LQGKKVNRVACGSAHTLA 4319



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3013 GKVYACGEAT-NGRLGLGLS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3063

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3064 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3123

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3124 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3180

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3181 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3228

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 3229 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3288

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3289 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3328



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ VES   ++V ++A GG H+A 
Sbjct: 4060 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVVESLRGIEVVDVAAGGAHSAC 4109

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4110 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4169

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4170 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4228

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4229 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4276

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4277 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4323

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4324 --KPTSTGKLPAQV--PMEYNHLQEI 4345



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/334 (34%), Positives = 167/334 (50%), Gaps = 24/334 (7%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y 
Sbjct: 2958 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3017

Query: 309  WG-GSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTF 364
             G  +N   GL L  G   ++ +P+++   L    V  V+   G  H   +T  G++F++
Sbjct: 3018 CGEATNGRLGLGLSSG---TVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSW 3073

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+
Sbjct: 3074 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGE 3121

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGS 482
            L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G 
Sbjct: 3122 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3181

Query: 483  PVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLG
Sbjct: 3182 GDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3240

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            HG       P +VE L+ K++  +  G     A+
Sbjct: 3241 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3274



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4015

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4016 GAGGRLGIGGTESVST--PTLLES-VQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4072

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR V+SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4073 GKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4120

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4121 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4180

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4181 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4239

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4240 HVRRPRQVQGLQGKKVIAIATGS 4262



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L ++ V  +AC E     ++ SG +YT   +
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      I +++ S G  H   + + G+++++G G  G
Sbjct: 480 SDALA------------PQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E  ++P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 141/298 (47%), Gaps = 29/298 (9%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           + H DG       + G+V+ WG C   G LG G         V + +F  K     VV  
Sbjct: 500 AAHSDGHHYLALAATGEVYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV-- 555

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
             +IACG  ++A +T +GE+++WG    GRLGHG   D   P L+  LK + V  VAC  
Sbjct: 556 --HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGS 613

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+  T AVT +G +++WG  + ++G LG G       PK +   L+ + V  V CG   +
Sbjct: 614 GDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFS 670

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  GQ++++G G    LGHG    V  P+ ++ L+G + +  A G  H  A+ E   
Sbjct: 671 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE--- 727

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      ++ +WG  D+ +     +  +  P+ +  L   +   ++CG + + A
Sbjct: 728 ---------DSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFA 776



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 135/280 (48%), Gaps = 16/280 (5%)

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A T+   ++ WG ++ +   LG      + +P   +  L  ++V  V+ G      VT  
Sbjct: 2956 AATIRTKVFVWGLNDKD--QLGGLKGSKIKVPS-FSETLSALNVVQVAGGSKSLFAVTVE 3012

Query: 359  GQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+++  G+ T G LG G    +V  PR++ +L      + A    H+        G  ++
Sbjct: 3013 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV---HSG-------GRHAT 3062

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
            +    GK+F+WG+GD G+LGH  +     P  + AL       ++CG S + A+T++G +
Sbjct: 3063 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3122

Query: 478  YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKG 535
            YT G   YG+LG      +L  ++   L  + V ++ACG  D     LT    V++WG G
Sbjct: 3123 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3182

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              G+LG G ++  N P  +E L  + V  I CG  F+ A+
Sbjct: 3183 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3222



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3076 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG--LGEYGRL 3133

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3134 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3184

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3185 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3242

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 3243 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3301

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3302 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3335



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2996 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3055

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3056 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3114

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3115 AITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3174

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3175 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3203



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 118/254 (46%), Gaps = 26/254 (10%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3955 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 4005

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ---VSCGHSLTVALTTT 474
               + GKL+  G G  GRLG G  E+   PT + + V+  F +   V+ G    +AL++ 
Sbjct: 4006 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLES-VQHVFIKKVAVNSGGKHCLALSSE 4061

Query: 475  GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            G VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGK
Sbjct: 4062 GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4121

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----V 584
            G  GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    +
Sbjct: 4122 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4181

Query: 585  DQSMCSGCRIPFNF 598
             +    GC++P   
Sbjct: 4182 GRGGSDGCKVPMKI 4195


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  190 bits (482), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2599 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2648

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 2649 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFS 2708

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 2709 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2765

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 2766 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 2815

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   VP  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 2816 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2875

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 2876 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 2934

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 2935 NRKPTLVQGLEGQKITRVACGSSHSVA 2961



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 191/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3592 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3651

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3652 GGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 3709

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHG+      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 3710 GHGSRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 3768

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 3769 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 3816

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VPT + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 3817 RGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3876

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 3877 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 3935

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 3936 LQGKKVNRVACGSAHTLA 3953



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2649 GKVYACGEAT-NGRLGLGL-SSGTVP-------IPRQITALSSYMVKKVAVHSGGRHATA 2699

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 2700 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 2759

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 2760 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 2816

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 2817 DGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 2864

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 2865 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 2924

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 2925 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2964



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/334 (34%), Positives = 167/334 (50%), Gaps = 24/334 (7%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y 
Sbjct: 2594 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2653

Query: 309  WG-GSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTF 364
             G  +N   GL L  G   ++ +P+++   L    V  V+   G  H   +T  G++F++
Sbjct: 2654 CGEATNGRLGLGLSSG---TVPIPRQITA-LSSYMVKKVAVHSGGRHATALTVDGKVFSW 2709

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+
Sbjct: 2710 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGE 2757

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGS 482
            L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G 
Sbjct: 2758 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 2817

Query: 483  PVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLG
Sbjct: 2818 GDFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2876

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            HG       P +VE L+ K++  +  G     A+
Sbjct: 2877 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2910



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 158/326 (48%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G                P+ +ES   ++V ++A GG H+A 
Sbjct: 3694 SEGEVYSWGEAE-DGKLGHGSRSPCDR---------PRVIESLRGIEVVDVAAGGAHSAC 3743

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 3744 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 3803

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 3804 VWSWGDGDYGKLGRGGSDGCKVPTKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3862

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 3863 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 3910

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 3911 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 3957

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 3958 --KPTSAGKLPAQV--PMECNHLQEI 3979



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 167/350 (47%), Gaps = 44/350 (12%)

Query: 244 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            AA +    EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ S
Sbjct: 104 QAAWIGSLQEVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRS 158

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQL 361
           G +YT   ++                P+ + G      + +++ S G  H   + + G++
Sbjct: 159 GRVYTQAYNSDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEV 205

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSS 417
           +++G G  G LGHGD + +  P+ + +  G +     V  ACG  ++AA+          
Sbjct: 206 YSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAAIT--------- 256

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTG 475
              + G+L+TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G
Sbjct: 257 ---AEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENG 313

Query: 476 HVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            V++ G   YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGK
Sbjct: 314 QVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 372

Query: 535 GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
           G N RLGHG  +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 373 GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 422



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3649

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S      L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3650 GAGGRLGIGGTESVS---SPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3706

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 3707 GKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 3754

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 3755 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 3814

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+PT+++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 3815 LGRGGSDGCKVPTKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3873

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 3874 HVRRPRQVQGLQGKKVIAIATGS 3896



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 157 HLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGILGGGI 208
           + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G LG G 
Sbjct: 162 YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGRLGHG- 219

Query: 209 HRSGSYAGVKMDSFVPKAVES----AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 264
                   V ++   PKA+ +         V +IACG  ++A +T +GE+++WG    GR
Sbjct: 220 ------DTVPLEE--PKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGR 271

Query: 265 LGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
           LGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG G
Sbjct: 272 LGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGRG 329

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
                  PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V  
Sbjct: 330 GSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRY 388

Query: 383 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE 442
           P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     + 
Sbjct: 389 PKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLRV 436

Query: 443 ARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            +  P  +  L   +   ++CG + + A ++
Sbjct: 437 TKPEPAALPGLDTKHIVGIACGPAQSFAWSS 467



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 2712 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 2769

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 2770 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2820

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 2821 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 2878

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 2879 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 2937

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 2938 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 2971



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2632 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVH 2691

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 2692 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 2750

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 2751 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 2810

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC +P N +R
Sbjct: 2811 LVFSWGDGDFGKLGRGGSEGCNVPQNIER 2839



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 107/222 (48%), Gaps = 14/222 (6%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3589 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3639

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3640 ---ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3696

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 3697 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3756

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL
Sbjct: 3757 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3798


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2962 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V+S GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3072 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3178

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3297

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4015

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4016 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4073

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4074 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4132

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4133 QLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4241 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4299

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4300 LQGKKVNRVACGSAHTLA 4317



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3012 GKVYSCGEAT-NGRLGLGMS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3062

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3123 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3227

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3288 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4058 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4107

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT 4167

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4227 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4274

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4321

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4322 --KPASAGKLPAQV--PMEYNHLQEI 4343



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 167/333 (50%), Gaps = 22/333 (6%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 3017 CG--EATNGRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 3121

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 3122 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGH
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P +VE L+ K++  +  G     A+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4014 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4071 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4118

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4179 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGS 4260



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 163/341 (47%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L ++ V  VAC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---- 475

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                         +  P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 476 --------QAYNSDMLAPQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 29/298 (9%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           + H DG       + G+V+ WG C   G LG G         V + +F  K     VV  
Sbjct: 500 AAHSDGHHYLALAATGEVYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV-- 555

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
             +IACG  ++A +T +GE+++WG    GRLGHG   D + P L+  LK + V  VAC  
Sbjct: 556 --HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 613

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+  T AVT +G +++WG  + ++G LG G       PK +   L+ + V  V CG   +
Sbjct: 614 GDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFS 670

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  GQ++++G G    LGHG    V  P+ ++ L+G + +  A G  H  A+ E   
Sbjct: 671 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE--- 727

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      ++ +WG  D+ +     +  +  PT +  L   +   ++CG + + A
Sbjct: 728 ---------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFA 776



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3132

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3133 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3241

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3242 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 92/165 (55%), Gaps = 9/165 (5%)

Query: 424  KLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
            K+F WG  D+ +LG G K +++ VP+    L   N  QV+ G     A+T  G VY+ G 
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 483  PVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGR 539
               G+LG   ++G +P  R    L+   V+++A   G  H   LT   +V++WG+G +G+
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
            LGH    + + P L+EALK K+++ I CG+S +AA+     L+ W
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK+++ G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3113

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3114 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4003

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4004 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4181 RGGSDGCKVPMKI 4193


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 198/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2964 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3013

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3014 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3073

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG    + G LGH + M+   P+ +   L    +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3074 WG--EGDDGKLGHFSRMNCDKPRLIEA-LRAKRIRDIACGSSHSAALTSSGELYTWGLGE 3130

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3131 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3180

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3181 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3240

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3241 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3299

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3300 NRKPTLVQGLEGQKITRVACGSSHSVA 3326



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 188/378 (49%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3958 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4017

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ +  VA   G  H  A++  G++Y+WG      G L
Sbjct: 4018 GGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4075

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHG+      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4076 GHGSRSPCDRPRVVES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4134

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V+ L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4135 QLKPKLVEVLQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4182

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4183 RGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4242

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4243 RPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4301

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4302 LQGKKVNRVACGSAHTLA 4319



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/341 (33%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3014 GKVYACGEAT-NGRLGLGLS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3064

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+AL+   +  +ACG  H+ A+T SG++Y
Sbjct: 3065 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELY 3124

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3125 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3181

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3182 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3229

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3230 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3289

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3290 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3329



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/338 (34%), Positives = 169/338 (50%), Gaps = 27/338 (7%)

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
            AA+ TK   VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G
Sbjct: 2958 AAVRTK---VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEG 3014

Query: 305  DMYTWG-GSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQ 360
             +Y  G  +N   GL L  G   ++ +P+++   L    V  V+   G  H   +T  G+
Sbjct: 3015 KVYACGEATNGRLGLGLSSG---TVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGK 3070

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
            +F++G+G  G LGH  R++   PR +++L+  R    ACG  H+AA+             
Sbjct: 3071 VFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALT------------ 3118

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVY 478
            SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V+
Sbjct: 3119 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3178

Query: 479  TMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
            + G   +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG  
Sbjct: 3179 SWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3237

Query: 538  GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3238 FRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3275



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 156/326 (47%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G                P+ VES   ++V ++A GG H+A 
Sbjct: 4060 SEGEVYSWGEAE-DGKLGHGSRSPCDR---------PRVVESLRGIEVVDVAAGGAHSAC 4109

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++ L+   V  VACG      + L+ D  
Sbjct: 4110 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDT 4169

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K+   L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4170 VWSWGDGDYGKLGRGGSDGCKVPMKIES-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4228

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4229 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4276

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4277 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4323

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4324 --KPSSAGKLPAQV--PMEYNHLQEI 4345



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 163/341 (47%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G++F++G G  G
Sbjct: 480 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVFSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L  K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 154/329 (46%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+VF WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LGHGDTVPLEEPKV-ISAFSGKQGGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            PR ++ L G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPRLLEGLHGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 748 VTKPEPAALPGLDTKHIVGIACGPAQSFA 776



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3077 GDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3134

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3135 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3185

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3186 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3243

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3244 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3302

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3303 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3336



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 23/279 (8%)

Query: 303  SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            SG +Y WG ++   G LG   G ++ +  P +    L  + +     G      VT+ G+
Sbjct: 3955 SGTIYGWGHNH--RGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4009

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGSSSSS 418
            L+  G G  G LG G   SVS P  ++S++   +R V    G  H  A+           
Sbjct: 4010 LYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLAL----------- 4058

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
              S G++++WG+ + G+LGHG +     P  V +L       V+ G + +  +T  G +Y
Sbjct: 4059 -SSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLY 4117

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 536
            T G   YG+LG   +  +L  ++   L  + V ++ACG  D     LT    V++WG G 
Sbjct: 4118 TWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4177

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G+LG G +D    P  +E+L    V  + CG+ F+ A+
Sbjct: 4178 YGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVAL 4216



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2997 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3056

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E    K  + +IACG  H A
Sbjct: 3057 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKR-IRDIACGSSHSA 3115

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3116 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3175

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3176 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3204



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 116/254 (45%), Gaps = 24/254 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3955 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4005

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4006 ---ADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4062

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4063 EVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4122

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVE L+  +V  + CG+     +CL        W  G    + 
Sbjct: 4123 RYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4182

Query: 586  QSMCSGCRIPFNFK 599
            +    GC++P   +
Sbjct: 4183 RGGSDGCKVPMKIE 4196


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 197/388 (50%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP    S      Q + CG     ++  
Sbjct: 3996 DVYLWGA-----------GRHGQLAEAGRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 4042

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4103 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4208

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4268

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4269 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4327

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4328 HVREPTLVTVLQGKNIRQISAGRCHSAA 4355



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3996 DVYLWGAGRHGQLAEAGRNVMVPATAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4049

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4050 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4154

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4214

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4274

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4275 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4145 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4201

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4202 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  +++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLSLSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4339

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 4340 GKNIRQISAGRCHSAAWT 4357


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 197/388 (50%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP    S      Q + CG     ++  
Sbjct: 3996 DVYLWGA-----------GRHGQLAEAGRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 4042

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4103 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4208

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4268

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4269 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4327

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4328 HVREPTLVTVLQGKNIRQISAGRCHSAA 4355



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3996 DVYLWGAGRHGQLAEAGRNVMVPATAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4049

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4050 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4154

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4214

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4274

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4275 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4145 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4201

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4202 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  +++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLSLSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4339

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 4340 GKNIRQISAGRCHSAAWT 4357


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2965 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+++G G 
Sbjct: 3075 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3131

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3181

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3241

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  +  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIIH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3300

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + +
Sbjct: 3301 NRKPTLVQGLEGQKITRVACGSSHSVS 3327



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 191/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4076

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  ++ G  H+A +T+AG L+T+G G +G LGHGD   
Sbjct: 4077 GHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSED 4135

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4136 QLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4184 RGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4243

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4244 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4302

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 4303 LQGKKINRVACGSAHTLA 4320



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 191/383 (49%), Gaps = 44/383 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P   E    L V  IAC  +   ++++ G V++             +SD+  P+L+ +L 
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDILGPQLVQSLA 492

Query: 284 NINVELVACGE--HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK---LNGPLE 338
           + N+  +A     HH  A+  +G++++WG  +   G LGHG+ + L  PK    L+G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVFSWGCGDG--GRLGHGDTVPLEEPKMISALSGKQA 550

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G HV  ++CG  ++A +T+ G+L+T+G G +G LGHG     + P  V  LKGL+ +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610

Query: 399 CGV--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
           CG     T AV E            +G++++WGDGD G+LG G  +    P  +  L + 
Sbjct: 611 CGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIAC 515
           +  +VSCG   +VALT  G VY+ G     +LG   + + + P  +EG L    V ++  
Sbjct: 659 DIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGEKVIDVVA 717

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           G  H   LT  +EVY+W  G+N +  H DT    +  P+ +  L  K +  I CG + + 
Sbjct: 718 GSTHCLALTEDSEVYSW--GSNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACGPAQSF 775

Query: 574 AICLHKWVSGVDQSMCSGCRIPF 596
           A     W S  + S+  G R+PF
Sbjct: 776 A-----WSSCSEWSI--GLRVPF 791



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 162/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V +IA GG H+A 
Sbjct: 4061 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDIAAGGAHSAC 4110

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G++++WG+   GRLGHG   D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4111 ITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT 4170

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGVGVVKVECGSQFSVALTKSGAVYTWGKG 4229

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4230 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4277

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4278 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4324

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P   GKLPT+V   +  N ++EI
Sbjct: 4325 --KPANAGKLPTQV--PMEYNHLQEI 4346



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/335 (34%), Positives = 166/335 (49%), Gaps = 30/335 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3015 GKVYACGEAT-NGRLGLGLS-SGTVP-------IPRQITALSNYVVKKVAVHSGGRHAMA 3065

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3066 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3125

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            +WG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3126 SWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3182

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3183 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3230

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T TG VY  G   +
Sbjct: 3231 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 3290

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYH 519
            GQ G+      + PT V+G L    +  +ACG  H
Sbjct: 3291 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSH 3324



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 169/337 (50%), Gaps = 24/337 (7%)

Query: 246  ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            ++ T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G 
Sbjct: 2957 SVATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3016

Query: 306  MYTWG-GSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQL 361
            +Y  G  +N   GL L  G   ++ +P+++   L    V  V+   G  H   +T  G++
Sbjct: 3017 VYACGEATNGRLGLGLSSG---TVPIPRQITA-LSNYVVKKVAVHSGGRHAMALTVDGKV 3072

Query: 362  FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+             S
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------S 3120

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYT 479
            SG+L++WG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++
Sbjct: 3121 SGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3180

Query: 480  MGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
             G   +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   
Sbjct: 3181 WGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3239

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3240 RLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAV 3276



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 153/306 (50%), Gaps = 25/306 (8%)

Query: 220 DSFVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           D   P+ V+S    ++  IA    G H   +   GEVFSWG   GGRLGHG    +  PK
Sbjct: 481 DILGPQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPK 540

Query: 278 LIDALKNI----NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
           +I AL       +V  +ACG  ++ A+T  G++YTWG  N  +G LGHG+     +P  +
Sbjct: 541 MISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN--YGRLGHGSSEDQTIPMLV 598

Query: 334 NGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
            G L+G+ V  VSCG     T  VT  GQ++++GDG +G LG G      TP+ ++ L+ 
Sbjct: 599 TG-LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
           L  V+ +CG   + A+ +             G++++WG GD  RLGHG +E    P  + 
Sbjct: 658 LDIVKVSCGSQFSVALTK------------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFV 510
            L       V  G +  +ALT    VY+ GS    Q  D  +     PT + G  +K+ V
Sbjct: 706 GLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDTLRITKPDPTALPGLDSKHIV 765

Query: 511 EEIACG 516
             IACG
Sbjct: 766 -GIACG 770



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 147/286 (51%), Gaps = 27/286 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG   H S      +M+   P+ +E+     +++IACG  H+A +T
Sbjct: 3070 GKVFSWGE-GDDGKLG---HFS------RMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3119

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE++SWG    GRLGHG ++    PK++  L    V  VACG  +  T A+T  G ++
Sbjct: 3120 SSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G      +P+ +   L G  V  + CG   +  +T +G ++T+G G
Sbjct: 3180 SWG--DGDFGKLGRGGSEGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG  + V  P+ V+ L+G + +  A G  H  AV +            +G+++ 
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTD------------TGQVYA 3284

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            WGD D G+ G+G       PT V  L      +V+CG S +V+ TT
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVSWTT 3330



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 166/330 (50%), Gaps = 36/330 (10%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG      +G    ++VS P   + L ++ V  +AC E     ++ +G +YT    
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYT---Q 476

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
             N  +LG     SL            + +++ S G  H   + + G++F++G G  G L
Sbjct: 477 AYNSDILGPQLVQSL-------ASRNIVKIAAHSDGH-HYLALAATGEVFSWGCGDGGRL 528

Query: 373 GHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           GHGD + +  P+ + +L G +     V  ACG  ++AA+             + G+L+TW
Sbjct: 529 GHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELYTW 576

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYG 486
           G G+ GRLGHG  E + +P  V  L       VSCG   + T+A+T  G V++ G   YG
Sbjct: 577 GRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYG 636

Query: 487 QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           +LG   ++G K P  +E KL    + +++CG      LT   +VY+WGKG N RLGHG  
Sbjct: 637 KLGRGGSDGCKTPKLIE-KLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +   +P L+E L+ ++V  +V G++   A+
Sbjct: 696 EHVRYPKLLEGLQGEKVIDVVAGSTHCLAL 725



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 179/395 (45%), Gaps = 34/395 (8%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4017 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A +             ++G L+TWG
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT------------AAGDLYTWG 4121

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGHGD E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4122 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4182 LGRGGSDGCKVPMKIDS-LTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAIC-----LHKWVSGVDQSMCSGC-------RI 594
                P  V+ L+ K+V +I  G S     C     ++ W    +  +  G        R+
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATG-SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 4299

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPN 629
                + K+ N   CG  +    S+ K   A   P 
Sbjct: 4300 VAALQGKKINRVACGSAHTLAWSTSKPANAGKLPT 4334



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 140/298 (46%), Gaps = 29/298 (9%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           + H DG       + G+VF WG C   G LG      G    ++    +           
Sbjct: 500 AAHSDGHHYLALAATGEVFSWG-CGDGGRLG-----HGDTVPLEEPKMISALSGKQAGKH 553

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
           V +IACG  ++A +T +GE+++WG    GRLGHG   D + P L+  LK + V  V+C  
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGS 613

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+  T AVT +G +++WG  + ++G LG G       PK +   L+ + +  VSCG   +
Sbjct: 614 GDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTPKLIE-KLQDLDIVKVSCGSQFS 670

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  GQ++++G G    LGHG    V  P+ ++ L+G + +    G  H  A+ E   
Sbjct: 671 VALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTE--- 727

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      ++++WG  D+ +     +  +  PT +  L   +   ++CG + + A
Sbjct: 728 ---------DSEVYSWGSNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACGPAQSFA 776



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG--LGEYGRL 3135

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3136 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3244

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             ++ +  P+ + G L G  +  V+ G  H   VT  GQ++ +GD   G  G+G       
Sbjct: 3245 TDVHVRKPQVVEG-LRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3303

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ +   + V + S
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVSWTTMDVATPS 3337



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 9/165 (5%)

Query: 424  KLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
            K+F WG  D+ +LG G K +++ VP+    L   N  QV+ G     A+T  G VY  G 
Sbjct: 2964 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 483  PVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGR 539
               G+LG   ++G +P  R    L+   V+++A   G  H   LT   +V++WG+G +G+
Sbjct: 3023 ATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3082

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
            LGH    + + P L+EALK K+++ I CG+S +AAI     L+ W
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSW 3127



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 117/253 (46%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4006

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4007 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V +IA G  H A +T+  ++YTWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKG 4123

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGHGD++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4184 RGGSDGCKVPMKI 4196



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 116/262 (44%), Gaps = 27/262 (10%)

Query: 353  AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            +V T   ++F +G      LG      +  P   ++L  L  V+ A G   + ++  V V
Sbjct: 2957 SVATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV 3013

Query: 413  GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC--GHSLTV 469
                      GK++  G+   GRLG G     + +P  + AL      +V+   G    +
Sbjct: 3014 ---------EGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAM 3064

Query: 470  ALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A +TS  E
Sbjct: 3065 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSAAITSSGE 3123

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL------HKWVS 582
            +Y+WG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L        W  
Sbjct: 3124 LYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3183

Query: 583  G----VDQSMCSGCRIPFNFKR 600
            G    + +    GC IP N +R
Sbjct: 3184 GDFGKLGRGGSEGCNIPQNIER 3205



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 31/212 (14%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSA-----VSSSSQGSGHDDGDSL-----GDVFIWGECT 199
           G+ GR GH  G S D     L +      V   S GSG  D  +L     G V+ WG+  
Sbjct: 579 GNYGRLGH--GSSEDQTIPMLVTGLKGLKVIDVSCGSG--DAQTLAVTENGQVWSWGD-- 632

Query: 200 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
           GD    G + R GS  G K     PK +E    LD+  ++CG + +  +TK G+V+SWG+
Sbjct: 633 GDY---GKLGRGGS-DGCK----TPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGK 684

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN-CNFGL 318
               RLGHG +  V +PKL++ L+   V  V  G  H  A+T   ++Y+WG ++ C    
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQ--- 741

Query: 319 LGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 349
             H + + +  P     P L+  H+  ++CGP
Sbjct: 742 --HFDTLRITKPDPTALPGLDSKHIVGIACGP 771


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 197/388 (50%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP    S      Q + CG     ++  
Sbjct: 3996 DVYLWGA-----------GRHGQLAEAGRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 4042

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4103 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4208

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4268

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4269 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4327

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4328 HVREPTLVTVLQGKNIRQISAGRCHSAA 4355



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3996 DVYLWGAGRHGQLAEAGRNVMVPATAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4049

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4050 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4154

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4214

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4274

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4275 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4145 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4201

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4202 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  +++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLSLSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4339

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 4340 GKNIRQISAGRCHSAAWT 4357


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  189 bits (481), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 554 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 603

Query: 252 GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
           G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 604 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 663

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG    + G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 664 WG--EGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 720

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 721 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 770

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 771 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 830

Query: 489 GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 831 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 889

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAA 574
              P+LV+ L+ +++  + CG+S + A
Sbjct: 890 NRKPTLVQGLEGQKITRVACGSSHSVA 916



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 1547 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 1606

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 1607 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 1664

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 1665 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 1723

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 1724 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 1771

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 1772 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 1831

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 1832 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 1890

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 1891 LQGKKVNRVACGSAHTLA 1908



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
           G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 604 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 654

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 655 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 714

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
           TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 715 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 771

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 772 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 819

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 820 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 879

Query: 486 GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
           GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 880 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 919



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 1649 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 1698

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 1699 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 1758

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 1759 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 1817

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 1818 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 1865

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 1866 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 1912

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 1913 --KPASAGKLPAQV--PMEYNHLQEI 1934



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 537 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 594

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
               AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 595 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 651

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
              +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 652 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 708

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                    SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 709 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 759

Query: 470 ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 760 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 818

Query: 529 VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 819 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 865



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 1604

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 1605 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 1661

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 1662 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 1709

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 1710 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 1769

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 1770 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 1828

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 1829 HVRRPRQVQGLQGKKVIAIATGS 1851



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150 GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
           G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 667 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 724

Query: 205 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
           G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 725 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 775

Query: 263 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
           G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 776 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 833

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
           +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 834 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 892

Query: 383 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
           P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 893 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 926



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407 VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
           VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 587 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 646

Query: 464 -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
            G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 647 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 705

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
            LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 706 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 765

Query: 578 --HKWVSG----VDQSMCSGCRIPFNFKR 600
               W  G    + +    GC IP N +R
Sbjct: 766 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 794



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 1544 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 1594

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 1595 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1651

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 1652 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 1711

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 1712 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 1771

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 1772 RGGSDGCKVPMKI 1784


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  189 bits (481), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 197/388 (50%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP    S      Q + CG     ++  
Sbjct: 3996 DVYLWGA-----------GRHGQLAEAGRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 4042

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4103 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4208

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4268

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4269 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4327

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4328 HVREPTLVTVLQGKNIRQISAGRCHSAA 4355



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3996 DVYLWGAGRHGQLAEAGRNVMVPATAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4049

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4050 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4154

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4214

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4274

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4275 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4145 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4201

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4202 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  +++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLSLSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4339

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 4340 GKNIRQISAGRCHSAAWT 4357


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  189 bits (481), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 138/415 (33%), Positives = 206/415 (49%), Gaps = 36/415 (8%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            V++WG    D +        G   G K+   +P   E    L   +IA G +   +V+++
Sbjct: 2953 VYVWGLNDKDQL--------GGLKGSKIK--IPVRSEVLSKLKPIHIAGGSKTLFIVSQE 3002

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ GE   GRLG G D ++  PKLI  L    ++ VA   G  H  A+T  G +++W
Sbjct: 3003 GKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSW 3062

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN  +L  P+ +   L+   +  ++CG  H+A + S G+L+T+G G 
Sbjct: 3063 GEGED---GKLGHGNCTTLDKPRLIES-LKSKRIRDIACGSGHSAAIASNGELYTWGLGE 3118

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V +L G R V+ ACG             + + S  + G ++TW
Sbjct: 3119 YGRLGHGDTATQMKPKLVQALSGQRVVQVACG----------SRDAQTMSLTADGCVYTW 3168

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +    P  V  L      QV CG   ++ALT  G V+T G   Y +L
Sbjct: 3169 GDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRL 3228

Query: 489  GDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G    +  + PT VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3229 GHGNDHHVRKPTLVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIV 3287

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKR 602
               PSLV  L D ++  + CG+S + A  L      VDQ   +G + P  F+  R
Sbjct: 3288 NRKPSLVHELDDTRMNRVSCGSSHSIAWIL------VDQP-TNGNQEPVTFQTAR 3335



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 222/493 (45%), Gaps = 55/493 (11%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            D  G ++ WG     G LGG         G K+   +P   ES   L    +A G +   
Sbjct: 3929 DGSGAIYGWGH-NHRGQLGG-------LEGAKIK--LPAPCESLSALRPIQLAGGEQTLF 3978

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSG 304
             VT  G+V+S G    GRLG G    V  P L+++++++ ++ VA   G  H  A++  G
Sbjct: 3979 AVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
             +Y+WG  +   G LGHGN +S   P KL   L GI +  ++CG  H+A +TSAG L+T+
Sbjct: 4039 HVYSWGEGD--DGKLGHGNRLSYDRP-KLVEDLLGIEIVDIACGGHHSAAITSAGWLYTW 4095

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-- 422
            G G +G LGHGD      P+ V++L+  + +  ACG               + + C +  
Sbjct: 4096 GKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG------------SGDAQTLCVTDD 4143

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
              +++WGDGD G+LG G  +   VP  + +L      +V CG   +VALT +G VYT G 
Sbjct: 4144 DNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGK 4203

Query: 483  PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
              Y +LG    +     R    L    +  IA G  H    + + EV+TWG    G+LG 
Sbjct: 4204 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGD 4263

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG-------VDQSMCSGCRIP 595
            G T     P LV AL+ K++  + CG++ T A    K           ++  +     IP
Sbjct: 4264 GTTSALQRPRLVHALQGKKITRVACGSAHTLAWSTAKATQSRMPASAPMEYDLVK--EIP 4321

Query: 596  FNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPN----------PNKPYRVCDNCFGKLT 645
            F+  R R       LV  H  +       +M P           P   Y + +  F K+ 
Sbjct: 4322 FSVLRNR-------LVLLHHFAELLCPALAMFPTTGPTGLDKLGPMLVYTIKEATFRKVV 4374

Query: 646  KATETSSSSHSTV 658
            +AT      H  V
Sbjct: 4375 QATMVRDRQHGPV 4387



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 177/337 (52%), Gaps = 41/337 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG   G + G+G     S P   DA+  + ++ + C E     ++LSG++Y     
Sbjct: 441 EVLAWG---GVKFGNG-----SSPFYCDAIAELGIKHLCCTERALLILSLSGNVY----- 487

Query: 313 NCNFGLLGHGNEMSLWLPKKL----NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
                ++ +G+E     P+++    + P+  I  +S S G  H   +T  G ++++G+G 
Sbjct: 488 -----IMYYGSETQY--PQRMHSFSDKPVTMI--ASHSDGK-HYLALTQDGCVYSWGNGD 537

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G LGHGD IS   P+ +++L     +  ACG  ++AA+             +SG+L+TW
Sbjct: 538 GGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAAL------------SASGELYTW 585

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYG 486
           G G+ GRLGHG  +   VPT V  L       V+CG   S T+ +T +G V++ G   YG
Sbjct: 586 GRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYG 645

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           +LG   ++G    ++  KL    V  + CG    A LT+R EVYTWGKG   RLGHG+ +
Sbjct: 646 KLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEE 705

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
              +P L+E+L+DK++K +  G +   A+   ++V G
Sbjct: 706 HVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYG 742



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 138/252 (54%), Gaps = 18/252 (7%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G+H   +T+ G V+SWG   GGRLGHG +     PKLI+ L   N+  +ACG  ++ A++
Sbjct: 518 GKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALS 577

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAG 359
            SG++YTWG    N+G LGHG+   + +P  L   L+G  V  V+CG     T  VT++G
Sbjct: 578 ASGELYTWGRG--NYGRLGHGSNDDVTVP-TLVTTLKGHMVVHVACGSGDSQTLCVTASG 634

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            +F++GDG +G LG G      TP+ VD L  +  VR  CG            G  S++ 
Sbjct: 635 IVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCG------------GQFSAAL 682

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
            + G+++TWG GD  RLGHG++E    P  + +L +     +S G +  +ALT    VY 
Sbjct: 683 TARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYG 742

Query: 480 MGSPVYGQLGDP 491
            G   YGQ+ DP
Sbjct: 743 WGRNDYGQI-DP 753



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 172/336 (51%), Gaps = 31/336 (9%)

Query: 250  KQGEVFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            +Q  V+ WG    ++LGG  G  +   V   +++  LK I++   A G      V+  G 
Sbjct: 2949 QQSAVYVWGLNDKDQLGGLKGSKIKIPV-RSEVLSKLKPIHI---AGGSKTLFIVSQEGK 3004

Query: 306  MYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV---SSVSCGPWHTAVVTSAGQL 361
            +Y  G G+N   G LG G++ ++  PK +  P    +V    +V  G  H   +T  G++
Sbjct: 3005 LYACGEGTN---GRLGLGDDYNMCEPKLI--PFLSQYVIKKVAVHSGGKHALALTQDGKV 3059

Query: 362  FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            F++G+G  G LGHG+  ++  PR ++SLK  R    ACG  H+AA+             S
Sbjct: 3060 FSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIA------------S 3107

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYT 479
            +G+L+TWG G+ GRLGHGD   ++ P  V AL      QV+CG   + T++LT  G VYT
Sbjct: 3108 NGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYT 3167

Query: 480  MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             G   +G+LG   ++G     +  +L    V ++ CG      LT   EV+TWGKG   R
Sbjct: 3168 WGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFR 3227

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            LGHG+      P+LVE L+ K++  +  G     A+
Sbjct: 3228 LGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAV 3263



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 36/290 (12%)

Query: 172 SAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAV 231
           + ++S S G  +      G V+ WG   GDG       R G    +  D   PK +E+ +
Sbjct: 510 TMIASHSDGKHYLALTQDGCVYSWG--NGDG------GRLGHGDNISHDE--PKLIETLL 559

Query: 232 VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA 291
             ++  IACG  ++A ++  GE+++WG    GRLGHG + DV+ P L+  LK   V  VA
Sbjct: 560 EKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVA 619

Query: 292 C--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           C  G+  T  VT SG +++WG  + ++G LG G       PK ++  L+ I+V  V CG 
Sbjct: 620 CGSGDSQTLCVTASGIVFSWG--DGDYGKLGRGGSDGSKTPKIVDKLLD-INVVRVFCGG 676

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             +A +T+ G+++T+G G    LGHG+   V  P+ ++SL+  +    + G  H  A+ E
Sbjct: 677 QFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTE 736

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
                          ++ WG  D G++          PT    + EP+ C
Sbjct: 737 DQF------------VYGWGRNDYGQID---------PTLGPVVSEPSLC 765



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 23/217 (10%)

Query: 150  GSDGRTGHLKGLSGDTFRVSLSSAVSSS---SQGSGHDDGDSL-----GDVFIWGECTGD 201
            G  GR GH  G S D  R  +  A+          G  D  +L      +V+ WG+  GD
Sbjct: 4098 GRYGRLGH--GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGD--GD 4153

Query: 202  GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
                G + R GS  G K    VP  ++S   L V  + CG + +  +T+ G V++WG+  
Sbjct: 4154 Y---GKLGRGGS-DGCK----VPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGD 4205

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
              RLGHG D  V  P+ + AL+   +  +A G  H  A +  G+++TWG ++   G LG 
Sbjct: 4206 YHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND--EGQLGD 4263

Query: 322  GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            G   +L  P+ ++  L+G  ++ V+CG  HT   ++A
Sbjct: 4264 GTTSALQRPRLVHA-LQGKKITRVACGSAHTLAWSTA 4299



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 27/216 (12%)

Query: 105 HTSYESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGD 164
           + S++ P   +++  L   +++ A       + SA G + +   G   GR GH  G + D
Sbjct: 546 NISHDEP--KLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNY-GRLGH--GSNDD 600

Query: 165 TFRVSLSSA-----VSSSSQGSGHDDGDSL-----GDVFIWGECTGDGILGGGIHRSGSY 214
               +L +      V   + GSG  D  +L     G VF WG+  GD    G + R GS 
Sbjct: 601 VTVPTLVTTLKGHMVVHVACGSG--DSQTLCVTASGIVFSWGD--GDY---GKLGRGGSD 653

Query: 215 AGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
                 S  PK V+  + ++V  + CGG+ +A +T +GEV++WG+    RLGHG +  V 
Sbjct: 654 G-----SKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVR 708

Query: 275 HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           +PKLI++L++  ++ ++ G  H  A+T    +Y WG
Sbjct: 709 YPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWG 744



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 75/178 (42%), Gaps = 28/178 (15%)

Query: 141 GSVNSLSSGGSDG-RTGHL--KGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGE 197
           G    L  GGSDG +T  +  K L  +  RV      S++    G        +V+ WG+
Sbjct: 642 GDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARG--------EVYTWGK 693

Query: 198 CTGDGI-LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFS 256
             GD   LG G      Y         PK +ES     +++++ GG H   +T+   V+ 
Sbjct: 694 --GDAYRLGHGNEEHVRY---------PKLIESLRDKKIKDLSVGGTHILALTEDQFVYG 742

Query: 257 WGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW-GGSN 313
           WG    G++   +   VS P L   L + NV  +A G   + A  +S     W GG+N
Sbjct: 743 WGRNDYGQIDPTLGPVVSEPSLCPTLSSKNVIGLASGPTQSFAWCMSA----WSGGAN 796


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2657 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2706

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 2707 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2766

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 2767 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2823

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 2824 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 2873

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 2874 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2933

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 2934 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 2992

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 2993 NRKPTLVQGLEGQKITRVACGSSHSVA 3019



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3650 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3709

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3710 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 3767

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 3768 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 3826

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 3827 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 3874

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 3875 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3934

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 3935 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 3993

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 3994 LQGKKVNRVACGSAHTLA 4011



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2707 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 2757

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 2758 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 2817

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 2818 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 2874

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 2875 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 2922

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 2923 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 2982

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 2983 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3022



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 3752 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 3801

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 3802 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 3861

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 3862 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3920

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 3921 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 3968

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 3969 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4015

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4016 --KPASAGKLPAQV--PMEYNHLQEI 4037



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2640 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2697

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 2698 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 2754

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 2755 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 2811

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 2812 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2862

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 2863 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 2921

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 2922 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2968



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3707

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3708 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3764

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 3765 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 3812

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 3813 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 3872

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 3873 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3931

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 3932 HVRRPRQVQGLQGKKVIAIATGS 3954



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 2770 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 2827

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 2828 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2878

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 2879 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 2936

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 2937 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 2995

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 2996 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3029



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 182/430 (42%), Gaps = 84/430 (19%)

Query: 203 ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG 262
           ++G G+     YA V      P   E    L V  IAC  +   ++++ G V++      
Sbjct: 380 VIGWGLIGWKYYANV----IGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT------ 429

Query: 263 GRLGHGVDSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNCNFGLLG 320
                  +SD   P+L+  L + N+  +A     HH  A+  +G++Y+WG  +   G LG
Sbjct: 430 ----QAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG--GRLG 483

Query: 321 HGNEMSLWLPKKLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 377
           HG+ + L  PK ++   G   G HV  ++CG  ++A +T+ G+L+T+G G +G LGHG  
Sbjct: 484 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS 543

Query: 378 ISVSTPREVDSLKGLRTVRAACGV--WHTAAVVE-------VMVGSSSSSNCSSGKLFTW 428
              + P  V  LKGL+ +  ACG     T AV E       V+  S     C SG + ++
Sbjct: 544 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENETTRLSVLWRSVLGILCVSGVVESF 603

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT---VALTTTGHVYTMGSPVY 485
                 +LG G +       C     EP    +   + +    V L     V+  G P  
Sbjct: 604 ---RYNQLGVGCR-------CRQRGWEPPQEDLKFFYGVLTRDVMLREGQIVFEAGRP-- 651

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEEIAC-----------------GDYHVAVLTSRTE 528
                    G +PT V  +  K  +  I C                 G  H   LT  +E
Sbjct: 652 ---------GCVPTPVSSQ--KQALGYIVCGGCSSLGPGKKVIDVAAGSTHCLALTEDSE 700

Query: 529 VYTWGKGANGRLGHGDT--DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQ 586
           V++W  G+N +  H DT    +  P+ +  L  K +  I CG + + A     W S  + 
Sbjct: 701 VHSW--GSNDQCQHFDTLRVTKPEPAALPGLDAKHIMGITCGPAQSCA-----WSSCSEW 753

Query: 587 SMCSGCRIPF 596
           S+  G R+PF
Sbjct: 754 SI--GLRVPF 761



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2690 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2749

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 2750 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 2808

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 2809 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 2868

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 2869 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 2897



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3647 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3697

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3698 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3754

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 3755 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3814

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 3815 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3874

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 3875 RGGSDGCKVPMKI 3887



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 40/246 (16%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 379 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 433

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 434 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 480

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 481 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 528

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG----HSLTVALTTTGHVYTMGS 482
           TWG G+ GRLGHG  E   +P  VA L       V+CG     +L V    T  +  +  
Sbjct: 529 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENETTRLSVLWR 588

Query: 483 PVYGQL 488
            V G L
Sbjct: 589 SVLGIL 594


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 197/388 (50%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP    S      Q + CG     ++  
Sbjct: 4007 DVYLWGA-----------GRHGQLAEAGRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 4053

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4054 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4113

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4114 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4170

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4171 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4219

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4220 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4279

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4280 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4338

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 4339 HVREPTLVTVLQGKNIRQISAGRCHSAA 4366



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 4007 DVYLWGAGRHGQLAEAGRNVMVPATAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4060

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4061 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4117

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4118 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4165

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4166 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4225

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4226 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4285

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4286 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4315



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4096 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4155

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4156 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4212

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4213 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4272

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 4333 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4368



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  +++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLSLSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4291 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 4350

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 4351 GKNIRQISAGRCHSAAWT 4368


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2713 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2762

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2822

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 2823 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2879

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 2880 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 2929

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 2930 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2989

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 2990 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3048

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3049 NRKPTLVQGLEGQKITRVACGSSHSVA 3075



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3706 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGYGA 3765

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3766 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 3823

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 3824 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 3882

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 3883 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 3930

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 3931 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3990

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 3991 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4049

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4050 LQGKKVNRVACGSAHTLA 4067



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2763 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 2813

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 2814 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 2873

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 2874 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 2930

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 2931 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 2978

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 2979 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3038

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3039 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3078



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 3808 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 3857

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 3858 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 3917

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 3918 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3976

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 3977 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4024

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4025 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4071

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4072 --KPASAGKLPAQV--PMEYNHLQEI 4093



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2696 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2753

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 2754 KSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 2810

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+    
Sbjct: 2811 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 2867

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+
Sbjct: 2868 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2918

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 2919 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 2977

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 2978 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3024



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGY 3763

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3764 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3820

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 3821 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 3868

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 3869 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 3928

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 3929 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3987

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 3988 HVRRPRQVQGLQGKKVIAIATGS 4010



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 160/341 (46%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P     L N+ V  +AC E     V  +G + T   +
Sbjct: 401 EVKGWG-----LIGWKYYANVIGPIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYN 455

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDGTFG 370
           +               +P+ + G L   +V  ++      H   + + G+++++G G   
Sbjct: 456 SDTL------------VPQLVQG-LASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGR 502

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 503 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 550

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 551 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 610

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 611 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 669

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 670 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 710



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 37/296 (12%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVES----A 230
           + H DG       + G+V+ WG   GDG       R G    V ++   PK + +     
Sbjct: 476 AAHSDGHHYLALAATGEVYSWG--CGDG------RRLGHGDTVPLEE--PKVISAFSGKQ 525

Query: 231 VVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV 290
               V +IACG  ++A +T +GE+++WG    GRLGHG   D + P L+  LK + V  V
Sbjct: 526 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 585

Query: 291 AC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
           AC  G+  T AVT +G +++WG  + ++G LG G       PK +   L+ + V  V CG
Sbjct: 586 ACGSGDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCG 642

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
              +  +T  GQ++++G G    LGHG    V  P+ ++ L+G + +  A G  H  A+ 
Sbjct: 643 SQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 702

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
           E              ++ +WG  D+ +     +  +  P  +  L   +   ++CG
Sbjct: 703 E------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 746



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 2826 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 2883

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 2884 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2934

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 2935 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 2992

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 2993 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3051

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3052 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3085



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2746 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2805

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 2806 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 2864

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 2865 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 2924

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 2925 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 2953



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3703 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVT--------- 3753

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3754 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3810

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 3811 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3870

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 3871 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3930

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 3931 RGGSDGCKVPMKI 3943



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 17/162 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG+  GD    G + R GS  G K     PK +E    LDV  + CG + +  +T
Sbjct: 601 GQVWSWGD--GDY---GKLGRGGS-DGCK----TPKLIEKLQDLDVVKVRCGSQFSIALT 650

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           K G+V+SWG+    RLGHG +  V +PKL++ L+   V  VA G  H  A+T   ++++W
Sbjct: 651 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 710

Query: 310 GGSN-CNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 349
           G ++ C      H + + +  P+    P L+  H+  ++CGP
Sbjct: 711 GSNDQCQ-----HFDTLRVTKPEPAALPGLDTKHIVGIACGP 747


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 195/388 (50%), Gaps = 37/388 (9%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3997 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4043

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN        +   P +G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4104 SWG--DGDYGKLGHGNS------DRQRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4155

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4156 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4204

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  +  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4205 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4264

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 4265 LPEGRARNHNRPQQIP-VLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN 4323

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 4324 HVREPTLVTGLQGKNVRQISAGRCHSAA 4351



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 156/330 (47%), Gaps = 33/330 (10%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4050

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4051 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+     + R+    +G   V+ +CG  H+A V             S GKLF
Sbjct: 4108 GDYGKLGHGN-----SDRQRRPXQGEEVVQMSCGFKHSAVVT------------SDGKLF 4150

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 4151 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4210

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 4211 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4270

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 4271 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4300



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 157/344 (45%), Gaps = 49/344 (14%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D   +++ SA    V +    S   DG S+     
Sbjct: 4049 ACGE-------GSYGRLG--QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4099

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P   E  V      ++CG +H+A+V
Sbjct: 4100 GEVFSWGD--GDYGKLGHGNSDRQRR---------PXQGEEVV-----QMSCGFKHSAVV 4143

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P+ + AL+   +  VACG +HT AV+  G M  
Sbjct: 4144 TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-V 4202

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P+K++  L GI +  V+CG   +  +T  G ++TFG   
Sbjct: 4203 WAFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4261

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
               L  G   + + P+++  L G+     A G  HT A+             S+G ++ W
Sbjct: 4262 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAW 4309

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G    G+LG G       PT V  L   N  Q+S G   + A T
Sbjct: 4310 GSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4353



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 197/388 (50%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP    S      Q + CG     ++  
Sbjct: 2644 DVYLWGA-----------GRHGQLAEAGRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 2690

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 2691 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2750

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 2751 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2807

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 2808 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 2856

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 2857 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 2916

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 2917 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 2975

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K ++ I  G   +AA
Sbjct: 2976 HVREPTLVTVLQGKNIRQISAGRCHSAA 3003



 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 2644 DVYLWGAGRHGQLAEAGRNVMVPATAPSFSQA------QQVICGQNCTFVIQANGTVLAC 2697

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 2698 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2754

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 2755 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 2802

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 2803 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 2862

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 2863 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 2922

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  +  L    ++ +  G   T A+
Sbjct: 2923 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 2952



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 2733 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 2792

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 2793 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 2849

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 2850 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 2909

Query: 409  -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                           +V VG+  + +  S+G ++ WG    G+L
Sbjct: 2910 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 2969

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       PT V  L   N  Q+S G   + A T
Sbjct: 2970 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 3005



 Score = 46.6 bits (109), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 2928 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 2987

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 2988 GKNIRQISAGRCHSAAWT 3005


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2962 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3072 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3178

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3297

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3957 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4016

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4017 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4074

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4075 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4133

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4134 QLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4181

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4182 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4241

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4242 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4300

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4301 LQGKKVNRVACGSAHTLA 4318



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3012 GKVYACGEAT-NGRLGLGLS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3062

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3123 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3227

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3288 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4059 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4108

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  VACG      + L+ D  
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT 4168

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4169 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4228 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4275

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4276 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4322

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4323 --KPASAGKLPAQV--PMEYNHLQEI 4344



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 173/348 (49%), Gaps = 26/348 (7%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2945 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002

Query: 295  HHTCAVTLSGDMYTWG-GSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPW 350
                AVT+ G +Y  G  +N   GL L  G   ++ +P+++   L    V  V+   G  
Sbjct: 3003 KSLFAVTVEGKVYACGEATNGRLGLGLSSG---TVPIPRQITA-LSSYVVKKVAVHSGGR 3058

Query: 351  HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            H   +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+   
Sbjct: 3059 HATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT-- 3116

Query: 411  MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLT 468
                      SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T
Sbjct: 3117 ----------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166

Query: 469  VALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
            +ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT   
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSG 3225

Query: 528  EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4015 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4072 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4119

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4179

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4180 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGS 4261



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 480 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 748 VTKPEPAALPGLDTKHIVGIACGPAQSFA 776



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3132

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3133 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3241

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 3242 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   + V + S
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWTTIDVATPS 3334



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3113

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3114 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4004

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4005 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  + CG+     +CL        W  G    + 
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4182 RGGSDGCKVPMKI 4194


>gi|147863933|emb|CAN81114.1| hypothetical protein VITISV_032628 [Vitis vinifera]
          Length = 290

 Score =  189 bits (480), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/194 (58%), Positives = 130/194 (67%), Gaps = 12/194 (6%)

Query: 826  KEALAVAGEETAKCRAAKDVIKSLTA-------QLKDMAEMLPVGAVRNSNS--FHS-SP 875
            KE   +  E   + +    VI+ L          LKDMAE LPVGAVRNS S  F S SP
Sbjct: 36   KEVKNILAERVTRRQGVPPVIEYLVQWKGLPKRPLKDMAERLPVGAVRNSKSPPFSSISP 95

Query: 876  TPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNK 935
            TP  DVS+ A EQ   P+TF  +   GSN +++SNGS    N S S     H EA  +NK
Sbjct: 96   TPLSDVSTVATEQICGPITFHESDSMGSNCVVISNGSSTSSNHS-SYARVGHSEAIIRNK 154

Query: 936  NRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRA 995
            N+T  AEP QG EWVEQDE GVYITLV+LPGG+KDLKRVRFSRK+FSEKQAEQWWAANR 
Sbjct: 155  NKT-DAEPYQGVEWVEQDEPGVYITLVSLPGGVKDLKRVRFSRKRFSEKQAEQWWAANRV 213

Query: 996  RVYQQYNVSMVDKS 1009
            RVYQQYNV +VDKS
Sbjct: 214  RVYQQYNVPLVDKS 227


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score =  189 bits (479), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/390 (34%), Positives = 199/390 (51%), Gaps = 36/390 (9%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DVF+WG             R G  A    +  VP    S      Q + CG     ++  
Sbjct: 4073 DVFLWGA-----------GRHGQLAEAGRNILVPTIAPS--FSQAQQVVCGQNCTFVIQP 4119

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4120 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4179

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVT+ G+LFTFG+G
Sbjct: 4180 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4236

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P +V +L+G    + ACG+ HT  V             S+  +  
Sbjct: 4237 DYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVV-------------SADGMMV 4283

Query: 428  W--GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            W  GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  G V+T G    
Sbjct: 4284 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRL 4343

Query: 486  GQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
              L + +A N   P +V G L+   ++++A G  H  VL+S  +VYTWG  + G+LG G 
Sbjct: 4344 IGLPEGRARNHNRPQQVPG-LSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGH 4402

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            T+    P+LV  L+ K +  I  G   +AA
Sbjct: 4403 TNHVREPTLVTTLQGKNIHQISAGRCHSAA 4432



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 183/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 380 EVYVWGSNSSHQLV----------EGTQEKILQPKLASSFA--DAQTIEAGQYCTFVISS 427

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    +  ++ V+     + HT A T  G+++
Sbjct: 428 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 487

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A V+  G+L+T+G+G
Sbjct: 488 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 545

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 546 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 592

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  V AL      +V  G   ++ALT+TG VY  G      
Sbjct: 593 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 652

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    V +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 653 CGSSEATALRPKLIE-ELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 711

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 712 PITKPKKVIGLDGVAIQQISAGTSHSLA 739



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 144/298 (48%), Gaps = 46/298 (15%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4162 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4221

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP+K+   LEG HV  V+CG  HT VV++
Sbjct: 4222 AVVTADGKLFTFG--NGDYGRLGLGNTSNKKLPEKVTA-LEGYHVGQVACGLNHTLVVSA 4278

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 4279 DGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTF 4338

Query: 409  -------------------------------EVMVGSSSSSNCSS-GKLFTWGDGDRGRL 436
                                           +V VG+  +   SS G ++TWG    G+L
Sbjct: 4339 GQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQL 4398

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT-TGHVYTMGSPVYGQLGDPKA 493
            G G       PT V  L   N  Q+S G   + A T  +      GS V  QLG P A
Sbjct: 4399 GLGHTNHVREPTLVTTLQGKNIHQISAGRCHSAAWTAPSVPPRAPGSSVPLQLGLPAA 4456



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 118/233 (50%), Gaps = 12/233 (5%)

Query: 345  VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
            V CG   T V+   G +   G+G++G LG G+          D L  L  + A  G   T
Sbjct: 4107 VVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNS---------DDLHVLTVISALQGFVVT 4157

Query: 405  AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
              V        S +   SG++F+WGDGD G+LGHG+ + +  P  + AL      Q+SCG
Sbjct: 4158 QLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCG 4217

Query: 465  HSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
               +  +T  G ++T G+  YG+LG    +N KLP +V   L    V ++ACG  H  V+
Sbjct: 4218 FKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTA-LEGYHVGQVACGLNHTLVV 4276

Query: 524  TSR-TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            ++    V+ +G G  G+LG G++  ++ P  V+ L    +K + CGT F+ A+
Sbjct: 4277 SADGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4329



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 157/307 (51%), Gaps = 36/307 (11%)

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T  V+ + ++Y WG SN +  L+  G +  +  PK  +   +     ++  G + T V++
Sbjct: 372 TPVVSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLASSFADA---QTIEAGQYCTFVIS 426

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVG 413
           S G +   G G++G LG GD  + ST +++  +  + ++ V ++ G   HT A       
Sbjct: 427 SDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFT----- 481

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALT 472
                  + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A++
Sbjct: 482 -------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS 534

Query: 473 TTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEV 529
             G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V
Sbjct: 535 EDGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-V 590

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVD 585
           +++G G NG+LGHGDT+    P +VEAL+   ++ +  G+  + A+     ++ W  G  
Sbjct: 591 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA- 649

Query: 586 QSMCSGC 592
              C GC
Sbjct: 650 ---CLGC 653



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 42/78 (53%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ V     + +Q++A G  H  +++  G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 4357 PQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQ 4416

Query: 284  NINVELVACGEHHTCAVT 301
              N+  ++ G  H+ A T
Sbjct: 4417 GKNIHQISAGRCHSAAWT 4434


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/387 (32%), Positives = 198/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 3222 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3271

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ + AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3272 GKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 3331

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG    + G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3332 WG--EGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3388

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3389 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3438

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3439 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3498

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3499 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3557

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV  L+ +++  + CG+S + A
Sbjct: 3558 NRKPTLVHGLEGQKITRVACGSSHSVA 3584



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 191/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 4213 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4272

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4273 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4330

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V+ V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4331 GHGNRSPCDRPRVIES-LRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4389

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4390 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4437

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4438 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4497

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4498 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4556

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4557 LQGKKVNRVACGSAHTLA 4574



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ V +     V+ +A   GGRHA  
Sbjct: 3272 GKVYACGEAT-NGRLGLGLS-SGTVP-------IPRQVTALSSYVVKKVAVHSGGRHATA 3322

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3323 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3382

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3383 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3439

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3440 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3487

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3488 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3547

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V G L    +  +ACG  H    T+
Sbjct: 3548 GQQGNGTTTVNRKPTLVHG-LEGQKITRVACGSSHSVAWTT 3587



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4315 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVADVAAGGAHSAC 4364

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4365 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 4424

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4425 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4483

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4484 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4531

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4532 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4578

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4579 --KPASAGKLPAQV--PMEYNHLQEI 4600



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/334 (34%), Positives = 167/334 (50%), Gaps = 24/334 (7%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y 
Sbjct: 3217 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3276

Query: 309  WG-GSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTF 364
             G  +N   GL L  G   ++ +P+++   L    V  V+   G  H   +T  G++F++
Sbjct: 3277 CGEATNGRLGLGLSSG---TVPIPRQVTA-LSSYVVKKVAVHSGGRHATALTVDGKVFSW 3332

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+
Sbjct: 3333 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGE 3380

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGS 482
            L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G 
Sbjct: 3381 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3440

Query: 483  PVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLG
Sbjct: 3441 GDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3499

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            HG       P +VE L+ K++  +  G     A+
Sbjct: 3500 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3533



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 177/394 (44%), Gaps = 34/394 (8%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4270

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4271 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4327

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+     A G  H+A V             ++G L+TWG
Sbjct: 4328 GKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVT------------AAGDLYTWG 4375

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4376 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4435

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4436 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4494

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAIC-----LHKWVSGVDQSMCSGC-------RI 594
                P  V+ L+ K+V +I  G S     C     ++ W    +  +  G        R+
Sbjct: 4495 HVRRPRQVQGLQGKKVIAIATG-SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 4553

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAP 628
                + K+ N   CG  +    S+ K   A   P
Sbjct: 4554 VAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4587



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L ++ V  +AC E     ++ +G +YT   +
Sbjct: 685 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYN 739

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 740 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 786

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 787 RLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 834

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 835 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 894

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 895 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 953

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 954 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 994



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 158/332 (47%), Gaps = 32/332 (9%)

Query: 152  DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
            +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 730  NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 787

Query: 204  LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
            LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 788  LGHGDTVPLEEPKV-ISTFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 842

Query: 264  RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
            RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 843  RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 900

Query: 322  GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
            G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 901  GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 959

Query: 382  TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
             P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 960  YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 1007

Query: 442  EARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
              +  PT +  L   +   ++CG + + A ++
Sbjct: 1008 VTKPEPTALPGLDTKHIVGIACGPAQSFAWSS 1039



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 16/280 (5%)

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A T+   ++ WG ++ +   LG      + +P   +  L  ++V  V+ G      VT  
Sbjct: 3215 AATIRTKVFVWGLNDKD--QLGGLKGSKIKVPS-FSETLSALNVVQVAGGSKSLFAVTVE 3271

Query: 359  GQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+++  G+ T G LG G    +V  PR+V +L      + A    H+        G  ++
Sbjct: 3272 GKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAV---HSG-------GRHAT 3321

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
            +    GK+F+WG+GD G+LGH  +     P  + AL       ++CG S + ALT++G +
Sbjct: 3322 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3381

Query: 478  YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKG 535
            YT G   YG+LG      +L  ++   L  + V ++ACG  D     LT    V++WG G
Sbjct: 3382 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3441

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              G+LG G ++  N P  +E L  + V  I CG  F+ A+
Sbjct: 3442 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3481



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3335 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3392

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3393 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3443

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3444 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3501

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3502 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3560

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3561 PTLVHGLEGQKITRVACGSSHSVAWTTVDVATPS 3594



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  V AL      +V+  
Sbjct: 3255 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVH 3314

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3315 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3373

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3374 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3433

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3434 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3462



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 4210 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4260

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4261 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4317

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4318 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKG 4377

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4378 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4437

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4438 RGGSDGCKVPMKI 4450


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/336 (36%), Positives = 175/336 (52%), Gaps = 16/336 (4%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGE-VFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           +P  + +    ++ +I CG  H    ++    V+SWG    GRLGHG  SD+  P+ I  
Sbjct: 56  LPLVISALDDCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKG 115

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           LK + ++ +ACG+ H  A+T  G++++WG  N N G LG G+   + +P K+    EGI 
Sbjct: 116 LKGLEIKQIACGDSHCLAITGDGEVHSWG-RNQN-GQLGLGHTEDVLVPNKV-AAFEGIA 172

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  ++ G  HTA VT +G+L+ +G G +G LG GDR     P EV ++ G +    ACG 
Sbjct: 173 VKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGW 232

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HT AV             +SG L+T+G    G+LGHGD E  LVP  V AL       V
Sbjct: 233 RHTIAVA------------NSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAV 280

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
           S G   TVAL   G +Y  G   +GQ+G    +     ++   +    V  + CG  H  
Sbjct: 281 SGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTV 340

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            +T R  VY+WG+G +G+LGHGD  DR  P  +E L
Sbjct: 341 AITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELL 376



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/343 (34%), Positives = 175/343 (51%), Gaps = 18/343 (5%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V +++ G  H   +     V SWG    G+LGHG   +   P +I AL +  +  + CG 
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGA 75

Query: 295 HHTCAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT A + S   +Y+WG  +  FG LGHGN   L++P+ + G L+G+ +  ++CG  H  
Sbjct: 76  DHTTARSESTRTVYSWGWGD--FGRLGHGNSSDLFIPRAIKG-LKGLEIKQIACGDSHCL 132

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            +T  G++ ++G    G LG G    V  P +V + +G+     A G  HTAAV E    
Sbjct: 133 AITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTE---- 188

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                   SGKL+ WG G  G LG GD+  RLVP  VAA+       V+CG   T+A+  
Sbjct: 189 --------SGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVAN 240

Query: 474 TGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
           +G++YT G   YGQLG       L P +V+  L    ++ ++ G  H   L    E+Y W
Sbjct: 241 SGNLYTFGWSKYGQLGHGDFEDHLVPHQVQ-ALKNKTIQAVSGGWRHTVALDEDGELYGW 299

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G    G++G G+TDD N P L+  + +++V  + CG   T AI
Sbjct: 300 GWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAI 342



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/285 (35%), Positives = 152/285 (53%), Gaps = 18/285 (6%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D F+P+A++    L+++ IACG  H   +T  GEV SWG    G+LG G   DV  P  +
Sbjct: 106 DLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKV 165

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            A + I V+++A G  HT AVT SG +Y WG     +G LG G+     +P ++   + G
Sbjct: 166 AAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWG--RYGNLGLGDRNDRLVPGEV-AAVPG 222

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
             ++ V+CG  HT  V ++G L+TFG   +G LGHGD      P +V +LK  +T++A  
Sbjct: 223 EKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKN-KTIQAVS 281

Query: 400 GVW-HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           G W HT A+ E             G+L+ WG    G++G G+ +    P  +  +V    
Sbjct: 282 GGWRHTVALDE------------DGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKV 329

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVE 502
            +V+CG   TVA+T  G+VY+ G    GQLG   A  + +P R+E
Sbjct: 330 TRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIE 374


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
            [Ornithorhynchus anatinus]
          Length = 4866

 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/388 (33%), Positives = 198/388 (51%), Gaps = 32/388 (8%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  +P    S      Q + CG     ++  
Sbjct: 4003 DVYLWGA-----------GRHGQLAEAGRNVMIPAGAPS--FSQAQQVICGQNCTFVIQA 4049

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4050 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4109

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVT+ G++FTFG+G
Sbjct: 4110 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKMFTFGNG 4166

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 4167 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------STDGSMVWA 4215

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 4216 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4275

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P +V   L    +E++A G  H   +TS  +VY WG  + G+LG G T+
Sbjct: 4276 LPEGRARNHNRPQQVP-VLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTN 4334

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+L+  L+ K ++ I  G   +AA
Sbjct: 4335 HVREPTLITVLQGKNIRQISAGRCHSAA 4362



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  VE +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLVE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 149/290 (51%), Gaps = 19/290 (6%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4092 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4151

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G M+T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 4152 AVVTADGKMFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVST 4208

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+ +       
Sbjct: 4209 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK------- 4261

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                  G ++T+G      L  G       P  V  L       V+ G   T+A+T+TG 
Sbjct: 4262 -----DGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGD 4316

Query: 477  VYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            VY  GS   GQLG    N  + PT +     KN + +I+ G  H A  T+
Sbjct: 4317 VYAWGSNSEGQLGLGHTNHVREPTLITVLQGKN-IRQISAGRCHSAAWTA 4365



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 166/343 (48%), Gaps = 35/343 (10%)

Query: 253  EVFSWGE------ELGGRLGHGVDSDVSHPKLIDALKNINV----------ELVACGEHH 296
            ++ SW         LGG+    +     H +L +A +N+ +          + V CG++ 
Sbjct: 3984 QIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGRNVMIPAGAPSFSQAQQVICGQNC 4043

Query: 297  TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTA 353
            T  +  +G +   G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+ 
Sbjct: 4044 TFVIQANGTVLACGEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSM 4100

Query: 354  VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
             +T +G++F++GDG +G LGHG+      PR++++L+G   V+ +CG  H+A V      
Sbjct: 4101 ALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT----- 4155

Query: 414  SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                   + GK+FT+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++T
Sbjct: 4156 -------ADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVST 4208

Query: 474  TG-HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G  V+  G   YG+LG   +  K   +    L    ++++ACG      LT    VYT+
Sbjct: 4209 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4268

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G+     L  G   + N P  V  L    ++ +  G   T AI
Sbjct: 4269 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAI 4311



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 156/309 (50%), Gaps = 40/309 (12%)

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T  V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V++
Sbjct: 365 TPIVSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVIS 419

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVM 411
           + G +   G G++G LG GD  + ST +++      S+K + + + + G  HT A     
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT--- 474

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVA 470
                    + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A
Sbjct: 475 ---------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RT 527
           +T  G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT 582

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
            V+++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G
Sbjct: 583 -VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641

Query: 584 VDQSMCSGC 592
                C GC
Sbjct: 642 A----CLGC 646



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 3/134 (2%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ V+    + ++ +ACG + +  +TK G V+++G++    L  G   + + P+ +  L 
Sbjct: 4235 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLA 4294

Query: 284  NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
             + +E VA G  HT A+T +GD+Y WG ++     LGH N +       L   L+G ++ 
Sbjct: 4295 GVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVR---EPTLITVLQGKNIR 4351

Query: 344  SVSCGPWHTAVVTS 357
             +S G  H+A  T+
Sbjct: 4352 QISAGRCHSAAWTA 4365



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKL++
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLVE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           + +  +S G  H+   T+
Sbjct: 718 VAIQQISAGTSHSLAWTA 735


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/407 (32%), Positives = 205/407 (50%), Gaps = 31/407 (7%)

Query: 174  VSSSSQGSGHDD--GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAV 231
            V + S+ S H     DS   VF+WG    D +        G   G K+   VP   ES  
Sbjct: 2967 VKTLSETSSHSKLWSDSPTKVFVWGLNDKDQL--------GGLKGSKVK--VPVYSESLT 3016

Query: 232  VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA 291
             L   +IA G +   +V+  G++++ GE   GRLG G  ++V+ P  + +L    ++ VA
Sbjct: 3017 ALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVA 3076

Query: 292  C--GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
               G  H  A+TL G +++WG G +   G LGH N +SL  PK +   L+   +  ++CG
Sbjct: 3077 VHSGGKHAMALTLDGKVFSWGEGED---GKLGHDNRLSLDRPKMIEA-LKSKRIRDIACG 3132

Query: 349  PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
              H+A ++S G+LFT+G G +G LGHGD ++   P+ V +L G   V+ ACG        
Sbjct: 3133 SSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACG-------- 3184

Query: 409  EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                 + + +  + G +F+WGDGD G+LG G  E   +P  +  L     C + CG   +
Sbjct: 3185 --SRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFS 3242

Query: 469  VALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
            +ALT  G VYT G   Y +LG     + + PT VE  L++  +  +A G  H    T + 
Sbjct: 3243 LALTKFGQVYTWGKGDYFRLGHGSDQHVRKPTLVES-LSEKKIVHVAVGALHCLCATDQG 3301

Query: 528  EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            +VY WG   +G+ G+G       PSLV  L+  +V  + CG+S + A
Sbjct: 3302 QVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHSIA 3348



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 149/302 (49%), Gaps = 19/302 (6%)

Query: 222  FVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
              P  +ES   + ++ +A   GG+H   ++  G+V+SWGE   G+LGHG  +   HP+LI
Sbjct: 4042 LTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLI 4101

Query: 280  DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            DAL+   +  +ACG  H+ AVT  G++YTWG     +G LGHG+      P KL   L G
Sbjct: 4102 DALQGKEIVDIACGGAHSAAVTAGGEIYTWGKG--RYGRLGHGDSEDQMKP-KLVETLIG 4158

Query: 340  IHVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
              V  ++CG     T  +T    ++++GDG +G LG G       P +++SL GL  V+ 
Sbjct: 4159 FKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKV 4218

Query: 398  ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
             CG   + A+              SG ++TWG GD  RLGHG  E    P  +AAL    
Sbjct: 4219 ECGSQFSVALTR------------SGSVYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKK 4266

Query: 458  FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD 517
               ++ G    VA +  G V+T G    GQLGD   N     R+   L    +  +ACG 
Sbjct: 4267 IICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGS 4326

Query: 518  YH 519
             H
Sbjct: 4327 AH 4328



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 148/294 (50%), Gaps = 26/294 (8%)

Query: 241  GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
            GG+HA  +T  G+VFSWGE   G+LGH     +  PK+I+ALK+  +  +ACG  H+ A+
Sbjct: 3080 GGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAI 3139

Query: 301  TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSA 358
            + +G+++TWG     +G LGHG+ ++   P KL   L G H+  V+CG     T  +++ 
Sbjct: 3140 SSTGELFTWGLG--EYGRLGHGDNLTQLRP-KLVKALLGHHIVQVACGSRDAQTLALSAE 3196

Query: 359  GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            G +F++GDG FG LG G       P  ++ L GL      CG   + A+ +         
Sbjct: 3197 GLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKF-------- 3248

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
                G+++TWG GD  RLGHG  +    PT V +L E     V+ G    +  T  G VY
Sbjct: 3249 ----GQVYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVY 3304

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYH-VAVLTSRT 527
              G   +GQ G    NG +    +  L  N     V  +ACG  H +A  TS T
Sbjct: 3305 AWGDNDHGQQG----NGTILVNRKPSLVLNLEGVRVNRVACGSSHSIAWTTSDT 3354



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 193/389 (49%), Gaps = 26/389 (6%)

Query: 193  FIWGECTGDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTK 250
              WG   G G I G G +  G   GV+     +P + E+   L    +  G +    VT 
Sbjct: 3962 LTWG---GSGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTS 4018

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
             G+V++ G   GGRLG G    +  P L++++++I ++ VA   G  H  A++  G +Y+
Sbjct: 4019 DGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYS 4078

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGHGN+     P+ ++  L+G  +  ++CG  H+A VT+ G+++T+G G 
Sbjct: 4079 WGEGD--DGKLGHGNKNGCDHPQLIDA-LQGKEIVDIACGGAHSAAVTAGGEIYTWGKGR 4135

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSSSSNCSSGKLF 426
            +G LGHGD      P+ V++L G + +  ACG     T  + +               ++
Sbjct: 4136 YGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITD------------DDNVW 4183

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            +WGDGD G+LG G  +   +P  + +L      +V CG   +VALT +G VYT G   Y 
Sbjct: 4184 SWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYH 4243

Query: 487  QLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            +LG     + + P ++     K  +  IA G  H    +   EV+TWG    G+LG G  
Sbjct: 4244 RLGHGSDEHVRHPKKIAALQGKKII-CIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTM 4302

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            +  + P LV  L+ K +  + CG++ + A
Sbjct: 4303 NAIHRPRLVVTLQGKNINRVACGSAHSLA 4331



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 162/330 (49%), Gaps = 39/330 (11%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD---MYTW 309
           EV +WG  L     H + +    P+  D+++ + V+ + C E     +TL+G    MY  
Sbjct: 449 EVMAWGW-LSWSSCHDLGTS---PQSCDSIRELGVKQIVCAERWLLILTLTGKVYIMYYS 504

Query: 310 GGSNCNFGLLGH-GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
             + C   + G  G E+S     KL    +G H  ++SC           G ++++G+G 
Sbjct: 505 SETQCPEQIEGFDGKEIS-----KLAAHADGKHSLALSCD----------GDVYSWGNGD 549

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G LGHGD  S   P ++  L G   +  +CG  ++AAV             SSG+++TW
Sbjct: 550 GGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVT------------SSGEVYTW 597

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYG 486
           G G+ GRLGHG  E   VPT V  L +     ++CG   + T+A+T TG V++ G   YG
Sbjct: 598 GRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYG 657

Query: 487 QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           +LG   ++G K P  +E KL    V  + CG      LT    VYTWGKG N RLGHG  
Sbjct: 658 KLGTGGSDGSKTPKLIE-KLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSE 716

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +   FP LVE L  K +K +  G+    A+
Sbjct: 717 NHVRFPKLVEGLNGKCIKKVAVGSGHVLAL 746



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 149/297 (50%), Gaps = 27/297 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+ WGE   DG LG G      +         P+ +++    ++ +IACGG H+A VT
Sbjct: 4074 GKVYSWGE-GDDGKLGHGNKNGCDH---------PQLIDALQGKEIVDIACGGAHSAAVT 4123

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
              GE+++WG+   GRLGHG   D   PKL++ L    V  +AC  G+  T  +T   +++
Sbjct: 4124 AGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVW 4183

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LG G      +P K+   L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4184 SWG--DGDYGKLGRGGSDGCKIPMKIES-LAGLGVVKVECGSQFSVALTRSGSVYTWGKG 4240

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  P+++ +L+G + +  A G  H  A  ++            G++FT
Sbjct: 4241 DYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDL------------GEVFT 4288

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            WGD D G+LG G   A   P  V  L   N  +V+CG + ++A +T         PV
Sbjct: 4289 WGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHSLAWSTNKSTSATHLPV 4345



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 174/356 (48%), Gaps = 31/356 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P++ +S   L V+ I C  R   ++T  G+V+               S+   P+ I+   
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVYI----------MYYSSETQCPEQIEGFD 517

Query: 284 NINVELVACGE--HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
              +  +A      H+ A++  GD+Y+WG  N + G LGHG+  S   P K+   L G +
Sbjct: 518 GKEISKLAAHADGKHSLALSCDGDVYSWG--NGDGGRLGHGDNNSRDQPTKIT-ELVGKN 574

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  ++A VTS+G+++T+G G +G LGHG     + P  V  LK    V  ACG 
Sbjct: 575 VIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGS 634

Query: 402 --WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
               T AV             ++G +F+WGDG  G+LG G  +    P  +  L +    
Sbjct: 635 GDAQTLAVT------------NTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVA 682

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDY 518
           +V CG   ++ALT +G VYT G     +LG    N  + P  VEG L    ++++A G  
Sbjct: 683 RVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEG-LNGKCIKKVAVGSG 741

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           HV  LT   EVY WG+  NG++G     + + P+L+  L+ K +  I CG + + A
Sbjct: 742 HVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSIA 797



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 149/306 (48%), Gaps = 29/306 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG     S       +D   PK +E+     +++IACG  H+A ++
Sbjct: 3091 GKVFSWGEGE-DGKLGHDNRLS-------LDR--PKMIEALKSKRIRDIACGSSHSAAIS 3140

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+F+WG    GRLGHG +     PKL+ AL   ++  VACG  +  T A++  G ++
Sbjct: 3141 STGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVF 3200

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G      +P  +   L G+ V  + CG   +  +T  GQ++T+G G
Sbjct: 3201 SWG--DGDFGKLGRGGSEGCDIPHNIE-RLNGLGVCMIECGAQFSLALTKFGQVYTWGKG 3257

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  P  V+SL   + V  A G  H     +             G+++ 
Sbjct: 3258 DYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATD------------QGQVYA 3305

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPV-Y 485
            WGD D G+ G+G       P+ V  L      +V+CG S ++A TT+  H   M  PV +
Sbjct: 3306 WGDNDHGQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHSIAWTTSDTHAPNMTEPVLF 3365

Query: 486  GQLGDP 491
              L DP
Sbjct: 3366 TALKDP 3371



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 134/287 (46%), Gaps = 27/287 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GDV+ WG   G G LG G + S            P  +   V  +V +I+CG  ++A VT
Sbjct: 540 GDVYSWGNGDG-GRLGHGDNNSRDQ---------PTKITELVGKNVIHISCGATYSAAVT 589

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
             GEV++WG    GRLGHG   D + P L+  LK+  +  +ACG  +  T AVT +G ++
Sbjct: 590 SSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVF 649

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG         G  +        KL   L+ I V+ V CG   +  +T +G ++T+G G
Sbjct: 650 SWGDGGYGKLGTGGSDGSK---TPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKG 706

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
               LGHG    V  P+ V+ L G    + A G  H  A+ +             G+++ 
Sbjct: 707 DNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTD------------DGEVYG 754

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
           WG  D G++G   +     PT +  L   N   + CG + ++A +++
Sbjct: 755 WGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSIAWSSS 801



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 123/241 (51%), Gaps = 15/241 (6%)

Query: 337  LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
            L+ IH++    G     +V+  G+L+  G+GT G LG G   +V+TP ++ SL      +
Sbjct: 3018 LKPIHIAG---GSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKK 3074

Query: 397  AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
             A    H+        G  + +    GK+F+WG+G+ G+LGH ++ +   P  + AL   
Sbjct: 3075 VAV---HSG-------GKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSK 3124

Query: 457  NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
                ++CG S + A+++TG ++T G   YG+LG      +L  ++   L  + + ++ACG
Sbjct: 3125 RIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACG 3184

Query: 517  --DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              D     L++   V++WG G  G+LG G ++  + P  +E L    V  I CG  F+ A
Sbjct: 3185 SRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLA 3244

Query: 575  I 575
            +
Sbjct: 3245 L 3245



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 119/254 (46%), Gaps = 24/254 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3967 SGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVT--------- 4017

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               S GK++  G G  GRLG G  +  L PT + ++  +      V+ G    +AL+T G
Sbjct: 4018 ---SDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDG 4074

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    NG    ++   L    + +IACG  H A +T+  E+YTWGKG
Sbjct: 4075 KVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKG 4134

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG------VD 585
              GRLGHGD++D+  P LVE L   +V  I CG+     +C+    + W  G      + 
Sbjct: 4135 RYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4194

Query: 586  QSMCSGCRIPFNFK 599
            +    GC+IP   +
Sbjct: 4195 RGGSDGCKIPMKIE 4208



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 109/232 (46%), Gaps = 19/232 (8%)

Query: 387  DSLKGLRTVRAACGVWHTAAV----VEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDK 441
            D L GL+  +    V+  +      + +  GS S    S  GKL+  G+G  GRLG G  
Sbjct: 2996 DQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHS 3055

Query: 442  EARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLP 498
                 P  + +L +    +V+   G    +ALT  G V++ G    G+LG D + +   P
Sbjct: 3056 NNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRP 3115

Query: 499  TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
              +E   +K  + +IACG  H A ++S  E++TWG G  GRLGHGD   +  P LV+AL 
Sbjct: 3116 KMIEALKSKR-IRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALL 3174

Query: 559  DKQVKSIVCGT------SFTAAICLHKWVSG----VDQSMCSGCRIPFNFKR 600
               +  + CG+      + +A   +  W  G    + +    GC IP N +R
Sbjct: 3175 GHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIER 3226


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/392 (33%), Positives = 199/392 (50%), Gaps = 33/392 (8%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            V++WG    D +        G   G K+   +P   E    L   +IA G +   +V+++
Sbjct: 2924 VYVWGLNDKDQL--------GGLKGSKIK--LPVHSEVLSKLKPIHIAGGSKTLFVVSQE 2973

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ GE   GRLG G +++V  PK I  L    ++ VA   G  H  A+T  G +++W
Sbjct: 2974 GKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSW 3033

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN +SL  P+ +   L+   +  ++CG  H+A + S G+L+T+G G 
Sbjct: 3034 GEGED---GKLGHGNRVSLDKPRLIEA-LKSKRIRDIACGSGHSAAIASNGELYTWGLGE 3089

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSSSSNCSSGKLF 426
            +G LGHGD  +   P+ VD+L G R ++ ACG     T A+ E             G ++
Sbjct: 3090 YGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTE------------DGSVY 3137

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            +WGDGD G+LG G  +    P  V  L      QV CG   ++ALT  G V+T G   Y 
Sbjct: 3138 SWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYF 3197

Query: 487  QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            +LG    +  + PT VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T
Sbjct: 3198 RLGHGNDHHVRRPTLVEGLRGKKVV-HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGST 3256

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
                 PSLV  L+D +V  + CG+S + A  L
Sbjct: 3257 MVNRKPSLVHNLEDAKVNRVACGSSHSIAWVL 3288



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 194/393 (49%), Gaps = 31/393 (7%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            D  G ++ WG     G LGG         G K+   +P   ES   L    +A G +   
Sbjct: 3891 DGSGAIYGWGH-NHRGQLGG-------LEGAKVK--LPLPCESLSALRPIQLAGGEQTLF 3940

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSG 304
             VT  G+V++ G    GRLG G    V  P L+++++++ ++ VA   G  H  A++  G
Sbjct: 3941 AVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4000

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
             +Y+WG  +   G LGHGN ++   PK +   L G  +  ++CG  H+A ++SAG L+T+
Sbjct: 4001 HVYSWGEGD--DGKLGHGNRITYDRPKLIEA-LLGTEIVDIACGGHHSAAISSAGWLYTW 4057

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG- 423
            G G +G LGHGD      P  V +L+G + +  ACG               + + C +  
Sbjct: 4058 GKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACG------------SGDAQTLCVTDD 4105

Query: 424  -KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
              +++WGDGD G+LG G  +   VP  + +L      +V CG   +VALT +G VYT G 
Sbjct: 4106 DNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGK 4165

Query: 483  PVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              Y +LG     + + P +V     K  V  IA G  H    + + EVYTWG    G+LG
Sbjct: 4166 GDYHRLGHGTDDHVRRPRKVSALQGKKIVS-IATGSLHCVACSDKGEVYTWGDNDEGQLG 4224

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             G T  +  P LV AL+ K +  + CG++ T A
Sbjct: 4225 DGTTHAQQSPRLVHALQGKNITRVACGSAHTLA 4257



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 176/344 (51%), Gaps = 31/344 (9%)

Query: 242  GRHAALVTKQGEVFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
             + A+ V +   V+ WG    ++LGG  G  +   V H +++  LK I++   A G    
Sbjct: 2912 AQRASDVQQNAAVYVWGLNDKDQLGGLKGSKIKLPV-HSEVLSKLKPIHI---AGGSKTL 2967

Query: 298  CAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV---SSVSCGPWHTA 353
              V+  G +Y  G G+N   G LG G+  ++  PK +  P    ++    +V  G  H  
Sbjct: 2968 FVVSQEGKLYACGEGTN---GRLGLGDNNNVGEPKPI--PFLSQYIIKKVAVHSGGKHAL 3022

Query: 354  VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
             +T  G++F++G+G  G LGHG+R+S+  PR +++LK  R    ACG  H+AA+      
Sbjct: 3023 ALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIA----- 3077

Query: 414  SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVAL 471
                   S+G+L+TWG G+ GRLGHGD    L P  V ALV     QV+CG   + T+AL
Sbjct: 3078 -------SNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMAL 3130

Query: 472  TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
            T  G VY+ G   +G+LG   ++G        +L    V ++ CG      LT   EV+T
Sbjct: 3131 TEDGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWT 3190

Query: 532  WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            WGKG   RLGHG+      P+LVE L+ K+V  +  G     A+
Sbjct: 3191 WGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAV 3234



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 170/335 (50%), Gaps = 38/335 (11%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG       G G     S P   DA+  I V+ + C E     ++LSG +Y     
Sbjct: 434 EVLAWGNV---HFGSG-----SMPFYCDAIAEIGVKQLCCTERALLILSLSGKVY----- 480

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
                ++ +G+E     P+ + G  + +  ++S   G  H   +T+ G ++++G+G  G 
Sbjct: 481 -----MMYYGSETQY--PQSVYGFADDVVQIASHPDGK-HYLALTTKGIVYSWGNGDGGR 532

Query: 372 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           LGHGD  S   P+ ++ L        ACG  ++AA+             S+G+L TWG G
Sbjct: 533 LGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAI------------SSTGELLTWGRG 580

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLG 489
             GRLGHG  +   +PT V AL       V+CG   S T+ +T +G V++ G   YG+LG
Sbjct: 581 SYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLG 640

Query: 490 DPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
              ++G KLP  V+  L +N V+ + CG    A LT+  EVYTWGKG + RLGHG+ +  
Sbjct: 641 RGGSDGSKLPKIVDKLLDQNVVK-VFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHV 699

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
            FP LVE L++K+V+ +  G     AI   + V G
Sbjct: 700 RFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYG 734



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/296 (34%), Positives = 155/296 (52%), Gaps = 29/296 (9%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G V+ WGE   DG LG          G ++    PK +E+ +  ++ +IACGG H+A 
Sbjct: 3998 SEGHVYSWGE-GDDGKLG---------HGNRITYDRPKLIEALLGTEIVDIACGGHHSAA 4047

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGD 305
            ++  G +++WG+   GRLGHG   D   P ++ AL+   V  VAC  G+  T  VT   +
Sbjct: 4048 ISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDN 4107

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +++WG  + ++G LG G      +P K+   L G+ V  V CG   +  +T +G ++T+G
Sbjct: 4108 VWSWG--DGDYGKLGRGGSDGCKVPMKIES-LAGLGVVKVECGSQFSVALTRSGAVYTWG 4164

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GK 424
             G +  LGHG    V  PR+V +L+G + V  A G  H  A             CS  G+
Sbjct: 4165 KGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVA-------------CSDKGE 4211

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            ++TWGD D G+LG G   A+  P  V AL   N  +V+CG + T+A +TT   +++
Sbjct: 4212 VYTWGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTKATHSL 4267



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 146/287 (50%), Gaps = 27/287 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG G         V +D   P+ +E+     +++IACG  H+A + 
Sbjct: 3028 GKVFSWGEGE-DGKLGHGNR-------VSLDK--PRLIEALKSKRIRDIACGSGHSAAIA 3077

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+++WG    GRLGHG  +    PKL+DAL    V  VACG  +  T A+T  G +Y
Sbjct: 3078 SNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVY 3137

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G     + P  ++  L G+ V  V CG   +  +T  G+++T+G G
Sbjct: 3138 SWG--DGDFGKLGRGGSDGCYSPLPVDR-LNGLGVVQVECGAQFSLALTKYGEVWTWGKG 3194

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG+   V  P  V+ L+G + V  A G  H  AV +            +G+++ 
Sbjct: 3195 DYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTD------------AGQVYA 3242

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            WGD D G+ G+G       P+ V  L +    +V+CG S ++A   T
Sbjct: 3243 WGDNDHGQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIAWVLT 3289



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 175/362 (48%), Gaps = 30/362 (8%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           +P   ++   + V+ + C  R   +++  G+V+         + +G  S+  +P+ +   
Sbjct: 448 MPFYCDAIAEIGVKQLCCTERALLILSLSGKVY--------MMYYG--SETQYPQSVYGF 497

Query: 283 KNINVELVACGE-HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            +  V++ +  +  H  A+T  G +Y+WG  N + G LGHG+  S   P+ +   L    
Sbjct: 498 ADDVVQIASHPDGKHYLALTTKGIVYSWG--NGDGGRLGHGDSFSCDEPQVIE-VLSDRT 554

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V+ ++CG  ++A ++S G+L T+G G++G LGHG    +S P  V +L G      ACG 
Sbjct: 555 VTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACG- 613

Query: 402 WHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
                         S + C  +SG +F+WGDGD G+LG G  +   +P  V  L++ N  
Sbjct: 614 -----------SGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVV 662

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDY 518
           +V CG   + ALT  G VYT G   + +LG   + + + P  VEG   K  V +++ G+ 
Sbjct: 663 KVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKK-VRDLSVGNL 721

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
           H+  +T    VY WG+    ++        + P+L   L  K V  +VCG   + A  + 
Sbjct: 722 HILAITEDQLVYGWGRNDACQIDPSLGAVVSEPTLCPTLSGKSVIGLVCGPMQSFAWSMS 781

Query: 579 KW 580
            W
Sbjct: 782 TW 783



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 154/337 (45%), Gaps = 34/337 (10%)

Query: 303  SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            SG +Y WG ++   G LG   G ++ L LP +    L  I ++    G      VT+ G+
Sbjct: 3893 SGAIYGWGHNH--RGQLGGLEGAKVKLPLPCESLSALRPIQLAG---GEQTLFAVTADGK 3947

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGSSSSS 418
            ++  G G  G LG G   SV  P  ++S++   ++ V    G  H  A+           
Sbjct: 3948 VYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLAL----------- 3996

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
              S G +++WG+GD G+LGHG++     P  + AL+      ++CG   + A+++ G +Y
Sbjct: 3997 -SSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLY 4055

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 536
            T G   YG+LG   ++ +L   V   L    V ++ACG  D     +T    V++WG G 
Sbjct: 4056 TWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4115

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSGVDQSMCSG- 591
             G+LG G +D    P  +E+L    V  + CG+ F+ A+     ++ W  G    +  G 
Sbjct: 4116 YGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4175

Query: 592  ---CRIPFN---FKRKRHNCYNCGLVYCHTCSSKKSV 622
                R P      + K+      G ++C  CS K  V
Sbjct: 4176 DDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEV 4212



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 139/300 (46%), Gaps = 48/300 (16%)

Query: 179 QGSGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV---PKAVES 229
           Q + H DG       + G V+ WG   G G LG G            DSF    P+ +E 
Sbjct: 503 QIASHPDGKHYLALTTKGIVYSWGNGDG-GRLGHG------------DSFSCDEPQVIEV 549

Query: 230 AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL 289
                V  IACG  ++A ++  GE+ +WG    GRLGHG+  D+S P ++ AL    V  
Sbjct: 550 LSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTH 609

Query: 290 VAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 347
           VAC  G+  T  VT SG +++WG  + ++G LG G      LPK ++  L+  +V  V C
Sbjct: 610 VACGSGDSQTLCVTNSGIVFSWG--DGDYGKLGRGGSDGSKLPKIVDKLLDQ-NVVKVFC 666

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G   +A +T+ G+++T+G G    LGHG+   V  P+ V+ L+  +    + G  H  A+
Sbjct: 667 GGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAI 726

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
            E  +            ++ WG  D           ++ P+  A + EP  C    G S+
Sbjct: 727 TEDQL------------VYGWGRND---------ACQIDPSLGAVVSEPTLCPTLSGKSV 765



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 94/190 (49%), Gaps = 30/190 (15%)

Query: 139 ACGSVNS---------LSSG-GSDGRTGHLKGLSGDTFRVSLSSAV---SSSSQGSGHDD 185
           ACGS  S         L+ G GS GR GH  G+  D    ++ +A+   + +    G  D
Sbjct: 559 ACGSTYSAAISSTGELLTWGRGSYGRLGH--GICDDISIPTVVTALNGHTVTHVACGSGD 616

Query: 186 GDSL-----GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
             +L     G VF WG+  GD    G + R GS       S +PK V+  +  +V  + C
Sbjct: 617 SQTLCVTNSGIVFSWGD--GDY---GKLGRGGSDG-----SKLPKIVDKLLDQNVVKVFC 666

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           GG+ +A +T  GEV++WG+    RLGHG +  V  PKL++ L+N  V  ++ G  H  A+
Sbjct: 667 GGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAI 726

Query: 301 TLSGDMYTWG 310
           T    +Y WG
Sbjct: 727 TEDQLVYGWG 736



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 8/182 (4%)

Query: 406  AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCG 464
             V E M    +S    +  ++ WG  D+ +LG G K +++ +P     L +     ++ G
Sbjct: 2905 VVQEQMTAQRASDVQQNAAVYVWGLNDKDQLG-GLKGSKIKLPVHSEVLSKLKPIHIAGG 2963

Query: 465  HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC--GDYHVAV 522
                  ++  G +Y  G    G+LG    N     +    L++  ++++A   G  H   
Sbjct: 2964 SKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALA 3023

Query: 523  LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LH 578
            LT   +V++WG+G +G+LGHG+    + P L+EALK K+++ I CG+  +AAI     L+
Sbjct: 3024 LTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELY 3083

Query: 579  KW 580
             W
Sbjct: 3084 TW 3085


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 137/395 (34%), Positives = 199/395 (50%), Gaps = 39/395 (9%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DVF+WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 2623 DVFLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 2669

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 2670 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2729

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 2730 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2786

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRA-------ACGVWHTAAVVEVMVGSSSSSNC 420
             +G LG G+  +   P  V +L+G +  +A       ACG+ HT AV           + 
Sbjct: 2787 DYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAV-----------ST 2835

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
                ++ +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT 
Sbjct: 2836 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 2895

Query: 481  GSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            G      L + +A N   P +V   L    +E++A G  H   L S  +VY WG  + G+
Sbjct: 2896 GQDRLIGLPEGRARNHNRPQQVP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 2954

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            LG G T+    P+LV  L+ K ++ I  G   +AA
Sbjct: 2955 LGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 2989



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 149/297 (50%), Gaps = 26/297 (8%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 2712 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 2771

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS-------SVSCGPW 350
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +        SV+CG  
Sbjct: 2772 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQAWNKSYSVACGLN 2828

Query: 351  HTAVVTSAGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            HT  V++ G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+ +
Sbjct: 2829 HTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 2888

Query: 410  VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
                         G ++T+G      L  G       P  V  L       V+ G   T+
Sbjct: 2889 ------------DGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTL 2936

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            AL +TG VY  GS   GQLG    N  + PT V     KN + +I+ G  H A  T+
Sbjct: 2937 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN-IRQISAGRCHSAAWTA 2992



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 161/337 (47%), Gaps = 35/337 (10%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +VF WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 2623 DVFLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 2676

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 2677 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2733

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 2734 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 2781

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-------VSCGHSLTVALTTTG-HVY 478
            T+G+GD GRLG G+   + +P  V AL      Q       V+CG + T+A++T G  V+
Sbjct: 2782 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVW 2841

Query: 479  TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
              G   YG+LG   +  K   +    L    ++++ACG      LT    VYT+G+    
Sbjct: 2842 AFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLI 2901

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             L  G   + N P  V  L    ++ +  G   T A+
Sbjct: 2902 GLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 2938


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/344 (35%), Positives = 181/344 (52%), Gaps = 18/344 (5%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
           G   D   P  + +   L++ ++ CG  H  A      +V+SWG    GRLGHG  SD+ 
Sbjct: 49  GDAQDRLSPTILSTLEGLEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLF 108

Query: 275 HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
            P+ I  L  + ++ +ACG+ H  AVT+ G + +WG  N N G LG G      +P+K+ 
Sbjct: 109 TPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWG-RNQN-GQLGLGTTEDSLVPQKIQ 166

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
              +G+ +  V+ G  HTA VT  G+L+ +G G +G LG GDR     P +V    G + 
Sbjct: 167 -AFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKM 225

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
           V  ACG  HT +V             SSG L+T+G    G+LGHGD    L+P  + AL 
Sbjct: 226 VMVACGWRHTISV------------SSSGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQ 273

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEI 513
                Q+S G   T+A+T+ G +Y  G   +GQ+G     +   P +V+  L +  +  I
Sbjct: 274 GSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVIL-I 332

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
           +CG  H   +T R  V++WG+G NG+LG+G+  DRN P +++AL
Sbjct: 333 SCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKAL 376



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 179/349 (51%), Gaps = 18/349 (5%)

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           +A V  V  I+ G  H+  +     V +WG    G+LGHG   D   P ++  L+ + + 
Sbjct: 10  TAPVRRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEII 69

Query: 289 LVACGEHHTCAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 347
            V CG  HT A + S  D+Y+WG    +FG LGHGN   L+ P+ +   L G+ +  ++C
Sbjct: 70  SVICGADHTIAYSESHTDVYSWGWG--DFGRLGHGNSSDLFTPQPIR-QLHGLKIKQIAC 126

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  H   VT  GQ+ ++G    G LG G       P+++ + +G+     A G  HTAAV
Sbjct: 127 GDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAV 186

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
            E             G+L+ WG G  G LG GD++ RLVP  V+         V+CG   
Sbjct: 187 TE------------DGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRH 234

Query: 468 TVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           T++++++G +YT G   YGQLG    A+  +P ++E  L  +F+ +I+ G  H   +TS 
Sbjct: 235 TISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQLE-ALQGSFISQISGGWRHTMAVTSD 293

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            ++Y WG    G++G GD  DR+ P  V+   +++V  I CG   T A+
Sbjct: 294 GKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAV 342



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 134/417 (32%), Positives = 196/417 (47%), Gaps = 47/417 (11%)

Query: 131 KVLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRVSLSSA-----VSSSS 178
           +VLL S  A  SV  LS         G DG+ GH  G + D    ++ S      + S  
Sbjct: 15  RVLLISAGASHSVALLSGNVVCTWGRGEDGQLGH--GDAQDRLSPTILSTLEGLEIISVI 72

Query: 179 QGSGHDDG--DSLGDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDV 235
            G+ H     +S  DV+ WG   GD G LG          G   D F P+ +     L +
Sbjct: 73  CGADHTIAYSESHTDVYSWG--WGDFGRLG---------HGNSSDLFTPQPIRQLHGLKI 121

Query: 236 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
           + IACG  H   VT +G+V SWG    G+LG G   D   P+ I A + + +++VA G  
Sbjct: 122 KQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAE 181

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           HT AVT  G++Y WG     +G LG G+     +P+K++ P  G  +  V+CG  HT  V
Sbjct: 182 HTAAVTEDGELYGWGWG--RYGNLGLGDRKDRLVPEKVSLP-HGEKMVMVACGWRHTISV 238

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           +S+G L+T+G   +G LGHGD      P ++++L+G    + + G  HT AV        
Sbjct: 239 SSSGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVT------- 291

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                S GKL+ WG    G++G GD   R  P  V   +E     +SCG   T+A+T   
Sbjct: 292 -----SDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQ 346

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
           +V++ G    GQLG    NG+   R    + K    + +CG +  + +   +   TW
Sbjct: 347 NVFSWGRGTNGQLG----NGECTDRNVPVIIKALSVDGSCGQHIESSMVDSSSGKTW 399



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG-DYH 519
           +S G S +VAL +   V T G    GQLG   A  +L   +   L    +  + CG D+ 
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHT 78

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           +A   S T+VY+WG G  GRLGHG++ D   P  +  L   ++K I CG S   A+ +
Sbjct: 79  IAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTM 136


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  187 bits (474), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 199/389 (51%), Gaps = 35/389 (8%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+    PK  E    L   NIA G +   +V+  
Sbjct: 2654 VFVWGLNDKDQL--------GGLKGSKIKE--PKFSEVISNLKPMNIAGGSKSLFIVSHD 2703

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G+VF+ GE   GRLG G   +V+ PK +  L    ++ VA   G  H  A+T+ G +++W
Sbjct: 2704 GKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSW 2763

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN++S   PK L   L+   +  V+CG  H+A VTS+G+L+T+G G 
Sbjct: 2764 GEGED---GKLGHGNKISYDRPK-LVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGE 2819

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSSSSNCSSGKLF 426
            +G LGHGD +    P++V +L   R V+ ACG     T A+ E               ++
Sbjct: 2820 YGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTE------------RHWVY 2867

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            +WGDGD G+LG G  +   +P  V  L      QV CG   ++AL+  G V+T G   Y 
Sbjct: 2868 SWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYF 2927

Query: 487  QLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            +LG    ++ + P  VE    KN + +++ G  H   +T R EVY WG   +G+ G+G+T
Sbjct: 2928 RLGHGSDSHVRWPQVVEELADKNVI-QVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNT 2986

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                 P++V  L  + + ++ CG+S + A
Sbjct: 2987 TVNRKPAIVRGL--EAITNVACGSSHSVA 3013



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/387 (34%), Positives = 197/387 (50%), Gaps = 25/387 (6%)

Query: 195  WGECTGDGIL-GGGIHRSGSYAGVKMDSFVPKAVESAVV-LDVQNIACGGRHAALVTKQG 252
            WG   G G++ G G +  G   GV+        +  A+  L    I  G +    +T  G
Sbjct: 3615 WG---GSGVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDG 3671

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG 310
            +V++ G   GGRLG G    VS P LI+ L+++ V  VA   G  H  A+T SGD+++WG
Sbjct: 3672 KVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWG 3731

Query: 311  GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
              +   G LGHG++     PK +   L   HV SV+CG  H+A +T++G+L+T+G G +G
Sbjct: 3732 EGD--DGKLGHGSKALCERPKLIES-LRDKHVVSVACGGAHSACITASGELYTWGKGRYG 3788

Query: 371  VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS--GKLFTW 428
             LGHGD      P++V+ L G   +  ACG               + + C S  G +++W
Sbjct: 3789 RLGHGDSEDQLKPKKVEELAGHNVLDVACG------------SGDAQTLCVSRDGLVWSW 3836

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +    P  + +L      +V CG   +VALT  G VYT G   Y +L
Sbjct: 3837 GDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRL 3896

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G   + + + P  V+G L    V ++A G  H    T   EV+TWG    G+LG G T+ 
Sbjct: 3897 GHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNA 3956

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P LV +LK K++  + CG++ T +
Sbjct: 3957 IQRPKLVASLKGKKMNRVACGSAHTVS 3983



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/329 (35%), Positives = 165/329 (50%), Gaps = 23/329 (6%)

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-G 311
            +VF WG     +LG    S +  PK  + + N+    +A G      V+  G ++  G G
Sbjct: 2653 KVFVWGLNDKDQLGGLKGSKIKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFACGEG 2712

Query: 312  SNCNFGLLGHGNEMSLWLPKKLN--GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            +N   G LG G+  ++  PK L    P   I   +V  G  H   +T  G++F++G+G  
Sbjct: 2713 TN---GRLGLGHSHNVAQPKPLTDLSPY-FIKKVAVHSGGRHALALTIDGRVFSWGEGED 2768

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG++IS   P+ V+SLK  R    ACG  H+AAV             SSG+L+TWG
Sbjct: 2769 GKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVT------------SSGELYTWG 2816

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G+ GRLGHGD   +L P  V AL      QV+CG   + T+ALT    VY+ G   +G+
Sbjct: 2817 SGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGK 2876

Query: 488  LGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G  LP  VE  L    V ++ CG      L+   +V+TWGKG   RLGHG   
Sbjct: 2877 LGKGGSDGSSLPQNVE-TLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDS 2935

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               +P +VE L DK V  +  G     A+
Sbjct: 2936 HVRWPQVVEELADKNVIQVSVGALHCIAV 2964



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/286 (36%), Positives = 147/286 (51%), Gaps = 24/286 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            GDVF WGE   DG LG      GS A  +     PK +ES     V ++ACGG H+A +T
Sbjct: 3725 GDVFSWGE-GDDGKLG-----HGSKALCER----PKLIESLRDKHVVSVACGGAHSACIT 3774

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              GE+++WG+   GRLGHG   D   PK ++ L   NV  VACG      + +S D   W
Sbjct: 3775 ASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVW 3834

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
               + ++G LG G       P+K++  L+   V  V CG   +  +T+AG ++T+G G +
Sbjct: 3835 SWGDGDYGKLGRGGSDGCKFPQKIDS-LQNAGVIKVECGSQFSVALTAAGVVYTWGKGDY 3893

Query: 370  GVLGHGDRISVSTPREVD-SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
              LGHG    V  P+ V  +L+G R ++ A G  H  A  +            SG++FTW
Sbjct: 3894 HRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTD------------SGEVFTW 3941

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            GD D G+LG G   A   P  VA+L      +V+CG + TV+ +T+
Sbjct: 3942 GDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHTVSWSTS 3987



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 140/288 (48%), Gaps = 29/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG          G K+    PK VES     ++++ACG  H+A VT
Sbjct: 2758 GRVFSWGE-GEDGKLG---------HGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVT 2807

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+++WG    GRLGHG +     PK + AL +  V  VACG  +  T A+T    +Y
Sbjct: 2808 SSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVY 2867

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G      LP+ +   L    V  V CG   +  ++  G+++T+G G
Sbjct: 2868 SWG--DGDFGKLGKGGSDGSSLPQNVE-TLNSQQVIQVECGAQFSLALSKNGKVWTWGKG 2924

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  P+ V+ L     ++ + G  H  AV +             G+++ 
Sbjct: 2925 DYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTD------------RGEVYA 2972

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
            WGD D G+ G+G+      P  V  L       V+CG S +VA ++TG
Sbjct: 2973 WGDNDHGQQGNGNTTVNRKPAIVRGL--EAITNVACGSSHSVAWSSTG 3018



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 147/303 (48%), Gaps = 42/303 (13%)

Query: 294  EHHTCAVTLSGDMYT--WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
            E     V  S D +T  WGGS    G  GH +   L       G +EG  V + +     
Sbjct: 3598 EQLVLWVNRSPDEWTLSWGGSGVIHGW-GHNHRGQL-------GGVEGAKVKTATICDAL 3649

Query: 352  TAV--------------VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
            TA+              +TS G+++  G G  G LG G   SVSTP  +++L+ +   + 
Sbjct: 3650 TALRPVQIVGGEQTLFALTSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQV 3709

Query: 398  AC--GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            A   G  H  A+             SSG +F+WG+GD G+LGHG K     P  + +L +
Sbjct: 3710 AVNSGGKHCLALT------------SSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRD 3757

Query: 456  PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA 514
             +   V+CG + +  +T +G +YT G   YG+LG   +  +L P +VE +L  + V ++A
Sbjct: 3758 KHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVE-ELAGHNVLDVA 3816

Query: 515  C--GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
            C  GD     ++    V++WG G  G+LG G +D   FP  +++L++  V  + CG+ F+
Sbjct: 3817 CGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFS 3876

Query: 573  AAI 575
             A+
Sbjct: 3877 VAL 3879



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 82/165 (49%), Gaps = 8/165 (4%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS---LTVALTTTGHVYT 479
            GK+F  G+G  GRLG G       P  +  L  P F +    HS     +ALT  G V++
Sbjct: 2704 GKVFACGEGTNGRLGLGHSHNVAQPKPLTDL-SPYFIKKVAVHSGGRHALALTIDGRVFS 2762

Query: 480  MGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
             G    G+LG   K +   P  VE    K  + ++ACG  H A +TS  E+YTWG G  G
Sbjct: 2763 WGEGEDGKLGHGNKISYDRPKLVESLKCKR-IRDVACGSSHSAAVTSSGELYTWGSGEYG 2821

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGT--SFTAAICLHKWV 581
            RLGHGD   +  P  V AL  ++V  + CG+  + T A+    WV
Sbjct: 2822 RLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWV 2866



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 125/282 (44%), Gaps = 29/282 (10%)

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV---------S 462
            +GS S       K+F WG  D+ +LG G K ++        + EP F +V         +
Sbjct: 2641 MGSPSMRENIECKVFVWGLNDKDQLG-GLKGSK--------IKEPKFSEVISNLKPMNIA 2691

Query: 463  CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC--GDYHV 520
             G      ++  G V+  G    G+LG   ++     +    L+  F++++A   G  H 
Sbjct: 2692 GGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHA 2751

Query: 521  AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC---- 576
              LT    V++WG+G +G+LGHG+    + P LVE+LK K+++ + CG+S +AA+     
Sbjct: 2752 LALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGE 2811

Query: 577  LHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRV 636
            L+ W SG    +  G  +P   K K+    +   V    C S+ +   ++    +  Y  
Sbjct: 2812 LYTWGSGEYGRLGHGDNVP-QLKPKQVRALSHERVVQVACGSRDAQTLALTER-HWVYSW 2869

Query: 637  CDNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENF 678
             D  FGKL K     SS    V    ++N      VE G  F
Sbjct: 2870 GDGDFGKLGKGGSDGSSLPQNVE---TLNSQQVIQVECGAQF 2908


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  186 bits (473), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 197/388 (50%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           DV++WG             R G  A    +  VP    S      Q + CG     ++  
Sbjct: 153 DVYLWGA-----------GRHGQLAEAGRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 199

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
            G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 200 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 259

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 260 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 316

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +G LG G+  +   P  V +L+G +  + ACG+ HT AV           +     ++ 
Sbjct: 317 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 365

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 366 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 425

Query: 488 LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           L + +A N   P ++   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 426 LPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 484

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV  L+ K ++ I  G   +AA
Sbjct: 485 HVREPTLVTVLQGKNIRQISAGRCHSAA 512



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 253 EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 153 DVYLWGAGRHGQLAEAGRNVMVPATAPSFSQA------QQVICGQNCTFVIQANGTVLAC 206

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
           G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 207 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 263

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 264 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 311

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
           T+G+GD GRLG G+   + +P  V AL      QV+CG + T+A++  G  V+  G   Y
Sbjct: 312 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 371

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 372 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 431

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            + N P  +  L    ++ +  G   T A+
Sbjct: 432 RNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 461



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 45/276 (16%)

Query: 239 ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 242 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 301

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
             VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +  V+CG  HT  V++
Sbjct: 302 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 358

Query: 358 AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-------- 408
            G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+         
Sbjct: 359 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 418

Query: 409 -------------------------------EVMVGSSSS-SNCSSGKLFTWGDGDRGRL 436
                                          +V VG+  + +  S+G ++ WG    G+L
Sbjct: 419 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 478

Query: 437 GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G G       PT V  L   N  Q+S G   + A T
Sbjct: 479 GLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 514



 Score = 46.6 bits (109), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 40/78 (51%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+ +     + ++++A G  H   +   G+V++WG    G+LG G  + V  P L+  L+
Sbjct: 437 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 496

Query: 284 NINVELVACGEHHTCAVT 301
             N+  ++ G  H+ A T
Sbjct: 497 GKNIRQISAGRCHSAAWT 514


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/387 (32%), Positives = 191/387 (49%), Gaps = 30/387 (7%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  AG   +  +P    +  +   Q + CG   + L+  
Sbjct: 3682 DVYLWGN-----------GRYGQLAGTGTNLTLPTL--APCLSQTQQVVCGQNCSFLIQS 3728

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+  P +I A +   V +LV +CG + H+ A+T +G+++
Sbjct: 3729 NGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVF 3788

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LGHGN      PK++   L+G  V  ++CG  H+AVVT+ G+LFTFG G
Sbjct: 3789 SWG--DGDFGKLGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTADGKLFTFGSG 3845

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
              G LG     +   P  V +L+G    + +CG+ HT  +           +     ++ 
Sbjct: 3846 ESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVL-----------SLDGMAVWA 3894

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G   A+  P  V  L      +V CG   +V L T GHVYT G      
Sbjct: 3895 FGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIG 3954

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            L D     +   +V   L   F+E+IA G  HV  L+S  ++Y WG  + G+LG G  + 
Sbjct: 3955 LPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNL 4014

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+L+ AL+ K +K I  G   ++A
Sbjct: 4015 VKEPTLITALQGKNIKQISAGRCHSSA 4041



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 204/436 (46%), Gaps = 41/436 (9%)

Query: 185 DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
           DGD++  V++WG  +   +  G + +            +PK  +     D Q I  G   
Sbjct: 334 DGDAV-TVYVWGSNSSHQLAEGTLEKI----------LLPKLTQG--FSDAQTIEAGQYC 380

Query: 245 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK--LIDALKNINVELVACG-EHHTCAVT 301
              V+  G V + G+   GRLG G  ++ S PK  +++  +NI     + G + HT A+T
Sbjct: 381 TFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAIT 440

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
           + G++++WG  +  +G LGHGN  +   PK + GPL    V S S G  H+A VT+ G+L
Sbjct: 441 VDGEVFSWG--DGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGEL 498

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +T+G+G FG LGH D  S +TP  V  + G+  V  ACG  HT AV +            
Sbjct: 499 YTWGEGDFGRLGHSDSQSRNTPTLVKDISGVGQV--ACGSSHTIAVAQ-----------D 545

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
              ++++G GD G+LGHGD      P  + AL      +V  G   ++ALT+ G V+  G
Sbjct: 546 GRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG 605

Query: 482 SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
                  G  +     P  VE  L+   + +I+CGD H   L+   EVY WG    G+ G
Sbjct: 606 CGSCLGCGSSETTSLRPRFVE-DLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCG 664

Query: 542 HGDTDD-RNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVS-GVDQSMCSGCRIPFNFK 599
            G T      P  V  L+   ++ I  GTS + A     W +   D+ + +  R PF   
Sbjct: 665 QGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLA-----WTAVPTDRQLVAWHR-PFCVD 718

Query: 600 RKRHN-CYNCGLVYCH 614
            +     Y C  + C+
Sbjct: 719 LEESTFTYLCNFLKCY 734



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 165/360 (45%), Gaps = 43/360 (11%)

Query: 150  GSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL-----GDVFIWGECTG 200
            G  GR G  +G S D F  ++ SA    V +    S   DG S+     G+VF WG+  G
Sbjct: 3738 GQYGRLG--QGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGD--G 3793

Query: 201  D-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
            D G LG G +              PK +E+    DV  +ACG RH+A+VT  G++F++G 
Sbjct: 3794 DFGKLGHGNNERQRR---------PKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGS 3844

Query: 260  ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLL 319
               GRLG    S+   P+ + AL+  +V  V+CG +HT  ++L G M  W   + ++G L
Sbjct: 3845 GESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDG-MAVWAFGDGDYGKL 3903

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            G G+  + + P+K+   L    +  V CG   + V+ + G ++TFG      L      +
Sbjct: 3904 GAGSSTAKYYPQKVE-QLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKN 3962

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
             S P+ V SL+GL     A G  H  A+             S+G ++ WG    G+LG G
Sbjct: 3963 RSNPQVVPSLEGLFIEDIAVGCEHVLAL------------SSTGDIYAWGCNSEGQLGLG 4010

Query: 440  DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT------TGHVYTMGSPVYGQLGDPKA 493
                   PT + AL   N  Q+S G   + A T       +      G P   QLG P++
Sbjct: 4011 HCNLVKEPTLITALQGKNIKQISAGRCHSSAWTAPSTSKNSALCPCQGGPGSVQLGLPQS 4070



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 145/305 (47%), Gaps = 26/305 (8%)

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+Y WG  N  +G L  G   +L LP     P        V CG   + ++ S G +   
Sbjct: 3682 DVYLWG--NGRYGQLA-GTGTNLTLPTL--APCLS-QTQQVVCGQNCSFLIQSNGAVMAV 3735

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGV-WHTAAVVEVMVGSSSSSNCS 421
            G+G +G LG G+   +  P  + + +G  +  +  +CG   H+ A+ E            
Sbjct: 3736 GEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTE------------ 3783

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            +G++F+WGDGD G+LGHG+ E +  P  + AL   +  Q++CG   +  +T  G ++T G
Sbjct: 3784 TGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFG 3843

Query: 482  SPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLT-SRTEVYTWGKGANGR 539
            S   G+LG    + K+ P RV   L    V +++CG  H  VL+     V+ +G G  G+
Sbjct: 3844 SGESGRLGQRSTSNKMQPERV-AALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGK 3902

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFK 599
            LG G +  + +P  VE L +K +K + CG  F+  +     V    Q    G  +P +  
Sbjct: 3903 LGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIG--LPDSML 3960

Query: 600  RKRHN 604
            + R N
Sbjct: 3961 KNRSN 3965


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 197/390 (50%), Gaps = 29/390 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            V++WG    D +        G   G K+   +P   ES   L   +IA G +   +V+++
Sbjct: 2911 VYVWGLNDKDQL--------GGLKGSKIK--LPVYSESLSKLKPVHIAGGSKTLFVVSQE 2960

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ GE   GRLG G D +   PK I  L    ++ VA   G  H  A+T  G +++W
Sbjct: 2961 GKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSW 3020

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN  SL  P+ +   L+   +  V+CG  H+A +TS+G+L+T+G G 
Sbjct: 3021 GEGED---GKLGHGNCSSLDKPRLIES-LKSKRIRDVACGSGHSAAITSSGELYTWGLGE 3076

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V SL G R ++ ACG             + + +  + G +++W
Sbjct: 3077 YGRLGHGDTNTQLKPKLVQSLVGQRVIQVACG----------SRDAQTMALTADGSVYSW 3126

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +    P  V  L      Q+ CG   ++ALT  G V+T G   Y +L
Sbjct: 3127 GDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRL 3186

Query: 489  GDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G    +  + PT VEG   K  +  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3187 GHGNDHHVRKPTLVEGLRGKKVI-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIV 3245

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
               PSLV  L D +V  + CG+S + A  L
Sbjct: 3246 NKKPSLVHELDDARVNRVSCGSSHSIAWVL 3275



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 192/392 (48%), Gaps = 29/392 (7%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            D  G ++ WG     G LGG         G K+   +P   ES   L    +  G +   
Sbjct: 3893 DGSGAIYGWGH-NHRGQLGG-------LEGAKVK--LPVLCESLSALRPVQLTGGEQTLF 3942

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSG 304
             VT  G+V++ G    GRLG G    V  P L+++++++ V+ VA   G  H  A++  G
Sbjct: 3943 AVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4002

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
             +Y+WG  +   G LGHGN +S   PK +   L G  +  V+CG  H+A +TSAG L+T+
Sbjct: 4003 HVYSWGEGD--DGKLGHGNRLSYDRPKLIE-ELLGTEIVDVACGGHHSAAITSAGWLYTW 4059

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG- 423
            G G +G LGHGD     TP+ V++L+  + +  ACG               + + C +  
Sbjct: 4060 GKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG------------SGDAQTLCVTDD 4107

Query: 424  -KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
              +++WGDGD G+LG G  +   VP  + +L      +V CG   +VALT +G +YT G 
Sbjct: 4108 DNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGK 4167

Query: 483  PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
              Y +LG    +     R    L    +  IA G  H    + + EV+TWG    G+LG 
Sbjct: 4168 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGD 4227

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G T     P LV AL+ K++  + CG++ T A
Sbjct: 4228 GTTCALQRPRLVHALQGKKITRVACGSAHTLA 4259



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 168/335 (50%), Gaps = 36/335 (10%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV +WG    G  G       S P   DA+  + ++ + C E     ++ SG++Y     
Sbjct: 437 EVLAWGSVKFGGTG-------SSPFYCDAIAELGIKQLCCTERALMILSTSGNVY----- 484

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDGTFG 370
                ++ +G+E     P+++ G      V+ ++  P   H   +T    ++++G+G  G
Sbjct: 485 -----MMYYGSETQY--PQRVYG-FSDKFVAMIASHPDGKHYLALTEDSSVYSWGNGDGG 536

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LGHGDR     P+ ++SL        ACG  ++AA+             S+G+L+TWG 
Sbjct: 537 RLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAAL------------SSNGELYTWGR 584

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQL 488
           G+ GRLGHG+ +  +VPT V+AL       V+CG   S T+ +T +G V++ G   YG+L
Sbjct: 585 GNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKL 644

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
           G    NG    ++  KL    V ++ CG    A LT+  EVYTWGKG   RLGHG+ +  
Sbjct: 645 GRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHV 704

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
            +P  +EALK K+VK +  G+    A+   + V G
Sbjct: 705 RYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYG 739



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 150/289 (51%), Gaps = 29/289 (10%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G V+ WGE   DG LG G   S            PK +E  +  ++ ++ACGG H+A 
Sbjct: 4000 SEGHVYSWGE-GDDGKLGHGNRLSYDR---------PKLIEELLGTEIVDVACGGHHSAA 4049

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGD 305
            +T  G +++WG+   GRLGHG   D   PKL++AL++  V  VAC  G+  T  VT   +
Sbjct: 4050 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN 4109

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +++WG  + ++G LG G      +P K+   L G+ V  V CG   +  +T +G ++T+G
Sbjct: 4110 VWSWG--DGDYGKLGRGGSDGCKVPMKIES-LAGLGVIKVECGSQFSVALTRSGSIYTWG 4166

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GK 424
             G +  LGHG    V  PR+V +L+G + +  A G  H  A             CS  G+
Sbjct: 4167 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA-------------CSDKGE 4213

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            +FTWGD D G+LG G   A   P  V AL      +V+CG + T+A +T
Sbjct: 4214 VFTWGDNDEGQLGDGTTCALQRPRLVHALQGKKITRVACGSAHTLAWST 4262



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 135/252 (53%), Gaps = 18/252 (7%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G+H   +T+   V+SWG   GGRLGHG  +    PKLI++L + N+  +ACG  ++ A++
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALS 574

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAG 359
            +G++YTWG    N+G LGHGN   + +P  L   L G  +  V+CG     T  VT++G
Sbjct: 575 SNGELYTWGRG--NYGRLGHGNSDDVMVP-TLVSALNGHMIVYVACGSGDSQTLCVTASG 631

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            +F++GDG +G LG G      TP+ VD L  +   +  CG            G  S++ 
Sbjct: 632 IVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCG------------GQFSAAL 679

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
            + G+++TWG G+  RLGHG++E    P  + AL      ++  G    +ALT    VY 
Sbjct: 680 TAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYG 739

Query: 480 MGSPVYGQLGDP 491
            G   YGQ+ DP
Sbjct: 740 WGRNDYGQI-DP 750



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 174/363 (47%), Gaps = 33/363 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P   ++   L ++ + C  R   +++  G V+         + +G  S+  +P+ +    
Sbjct: 453 PFYCDAIAELGIKQLCCTERALMILSTSGNVY--------MMYYG--SETQYPQRVYGFS 502

Query: 284 NINVELVAC---GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
           +  V ++A    G+H+  A+T    +Y+WG  N + G LGHG+      PK +   ++  
Sbjct: 503 DKFVAMIASHPDGKHYL-ALTEDSSVYSWG--NGDGGRLGHGDRTWYEEPKLIESLVDK- 558

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
           +++ ++CG  ++A ++S G+L+T+G G +G LGHG+   V  P  V +L G   V  ACG
Sbjct: 559 NITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACG 618

Query: 401 VWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
                          S + C  +SG +F+WGDGD G+LG G       P  V  L++ N 
Sbjct: 619 ------------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINV 666

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGD 517
            +V CG   + ALT  G VYT G     +LG   + + + P  +E   TK  V+E+  G 
Sbjct: 667 AKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKK-VKELCVGS 725

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            HV  LT    VY WG+   G++        + P+L   L  K V  +VCG + + A C 
Sbjct: 726 LHVLALTEDQLVYGWGRNDYGQIDPALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFAWCT 785

Query: 578 HKW 580
             W
Sbjct: 786 SAW 788



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 145/287 (50%), Gaps = 27/287 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG G   S       +D   P+ +ES     ++++ACG  H+A +T
Sbjct: 3015 GRVFSWGEGE-DGKLGHGNCSS-------LDK--PRLIESLKSKRIRDVACGSGHSAAIT 3064

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+++WG    GRLGHG  +    PKL+ +L    V  VACG  +  T A+T  G +Y
Sbjct: 3065 SSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY 3124

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G     + P  L   L G+ V  + CG   +  +T  G+++T+G G
Sbjct: 3125 SWG--DGDFGKLGRGGSDGCYTP-LLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKG 3181

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG+   V  P  V+ L+G + +  A G  H  AV +            +G+++ 
Sbjct: 3182 DYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD------------TGQVYA 3229

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            WGD D G+ G+G       P+ V  L +    +VSCG S ++A   T
Sbjct: 3230 WGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3276



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 151/335 (45%), Gaps = 30/335 (8%)

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            SG +Y WG ++   G LG      + LP  L   L  +    ++ G      VT+ G+++
Sbjct: 3895 SGAIYGWGHNH--RGQLGGLEGAKVKLPV-LCESLSALRPVQLTGGEQTLFAVTADGKVY 3951

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC--GVWHTAAVVEVMVGSSSSSNC 420
              G G  G LG G   SV  P  ++S++ +   + A   G  H  A+             
Sbjct: 3952 ATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLAL------------S 3999

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            S G +++WG+GD G+LGHG++ +   P  +  L+      V+CG   + A+T+ G +YT 
Sbjct: 4000 SEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTW 4059

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANG 538
            G   YG+LG   +  +L  ++   L    V ++ACG  D     +T    V++WG G  G
Sbjct: 4060 GKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4119

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG--- 591
            +LG G +D    P  +E+L    V  + CG+ F+ A+     ++ W  G    +  G   
Sbjct: 4120 KLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDD 4179

Query: 592  -CRIPFN---FKRKRHNCYNCGLVYCHTCSSKKSV 622
              R P      + K+      G ++C  CS K  V
Sbjct: 4180 HVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 4214



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 12/190 (6%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GKL+  G+G  GRLG GD      P  +  L +    +V+   G    +ALT  G V++ 
Sbjct: 2961 GKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSW 3020

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            G    G+LG    +     R+   L    + ++ACG  H A +TS  E+YTWG G  GRL
Sbjct: 3021 GEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRL 3080

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGT------SFTAAICLHKWVSG----VDQSMCS 590
            GHGDT+ +  P LV++L  ++V  + CG+      + TA   ++ W  G    + +    
Sbjct: 3081 GHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSD 3140

Query: 591  GCRIPFNFKR 600
            GC  P    R
Sbjct: 3141 GCYTPLLVDR 3150



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 33/229 (14%)

Query: 139 ACGSVNS--LSSGG--------SDGRTGHLKGLSGDTFRVSLSSAVSSSS---QGSGHDD 185
           ACGS  S  LSS G        + GR GH  G S D    +L SA++         G  D
Sbjct: 564 ACGSTYSAALSSNGELYTWGRGNYGRLGH--GNSDDVMVPTLVSALNGHMIVYVACGSGD 621

Query: 186 GDSL-----GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
             +L     G VF WG+  GD    G + R G        S  PK V+  + ++V  + C
Sbjct: 622 SQTLCVTASGIVFSWGD--GDY---GKLGRGGCNG-----SKTPKIVDKLLDINVAKVYC 671

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           GG+ +A +T  GEV++WG+    RLGHG +  V +PK I+ALK   V+ +  G  H  A+
Sbjct: 672 GGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLAL 731

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           T    +Y WG +  ++G +       +  P  L   L G +V  + CGP
Sbjct: 732 TEDQLVYGWGRN--DYGQIDPALGTIVSEP-TLCPTLSGKNVIGLVCGP 777


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 136/398 (34%), Positives = 199/398 (50%), Gaps = 42/398 (10%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 4000 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4046

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4047 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4106

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4107 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4163

Query: 368  TFGVLGHGDRISVSTPREVDSLKG----------LRTVRAACGVWHTAAVVEVMVGSSSS 417
             +G LG G+  +   P  V +L+G          L  ++ ACG+ HT AV          
Sbjct: 4164 DYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAV---------- 4213

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
             +     ++ +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHV
Sbjct: 4214 -SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHV 4272

Query: 478  YTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            YT G      L + +A N   P ++   L    +E++A G  H   L S  +VY WG  +
Sbjct: 4273 YTFGQDRLIGLPEGRARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNS 4331

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             G+LG G T+    P+LV  L+ K V+ I  G   +AA
Sbjct: 4332 EGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4369



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 371 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 418

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 479 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 536

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 537 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 583

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 643

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 644 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 702

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 703 PITKPKKVSGLDGIAIQQISAGTSHSLA 730



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 148/300 (49%), Gaps = 29/300 (9%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4089 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4148

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS----------SVSC 347
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG  +            V+C
Sbjct: 4149 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQARNNTLFFLQVAC 4205

Query: 348  GPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            G  HT  V++ G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A
Sbjct: 4206 GLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVA 4265

Query: 407  VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
            + +             G ++T+G      L  G       P  +  L       V+ G  
Sbjct: 4266 LTK------------DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAE 4313

Query: 467  LTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             T+AL +TG VY  GS   GQLG    N  + PT V     KN V +I+ G  H A  T+
Sbjct: 4314 HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN-VRQISAGRCHSAAWTA 4372



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 162/340 (47%), Gaps = 38/340 (11%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 4000 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4053

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4054 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4110

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4111 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4158

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAAL-------VEPN---FCQVSCGHSLTVALTTTG- 475
            T+G+GD GRLG G+   + +P  V AL          N   F QV+CG + T+A++  G 
Sbjct: 4159 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGS 4218

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             V+  G   YG+LG   +  K   +    L    ++++ACG      LT    VYT+G+ 
Sbjct: 4219 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4278

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                L  G   + N P  +  L    ++ +  G   T A+
Sbjct: 4279 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4318



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 156/309 (50%), Gaps = 40/309 (12%)

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T  V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V++
Sbjct: 363 TPIVSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVIS 417

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVM 411
           + G +   G G++G LG GD  + ST +++      S+K + + + + G  HT A     
Sbjct: 418 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT--- 472

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVA 470
                    + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A
Sbjct: 473 ---------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 523

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RT 527
           +T  G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT
Sbjct: 524 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT 580

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
            V+++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G
Sbjct: 581 -VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 639

Query: 584 VDQSMCSGC 592
                C GC
Sbjct: 640 A----CLGC 644



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 601 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 658

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 659 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 715

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 716 IAIQQISAGTSHSLAWTA 733


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  186 bits (471), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 189/358 (52%), Gaps = 22/358 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDA 281
           VP   E+   L+V  +A G +    VT +G+V+S GE   GRLG G+ S  V  P+ I A
Sbjct: 18  VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 77

Query: 282 LKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
           L +  V+ VA   G  H  A+T+ G +++WG    + G LGH + M+   P+ +   L+ 
Sbjct: 78  LSSYVVKKVAVHSGGRHATALTVDGKVFSWG--EGDDGKLGHFSRMNCDKPRLIEA-LKT 134

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
             +  ++CG  H+A +TS+G+L+T+G G +G LGHGD  +   P+ V  L G R ++ AC
Sbjct: 135 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 194

Query: 400 GV--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           G     T A+ +             G +F+WGDGD G+LG G  E   +P  +  L    
Sbjct: 195 GSRDAQTLALTD------------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 242

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACG 516
            CQ+ CG   ++ALT +G V+T G   Y +LG     + + P  VEG   K  V  +A G
Sbjct: 243 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH-VAVG 301

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             H   +T   +VY WG   +G+ G+G T     P+LV+ L+ +++  + CG+S + A
Sbjct: 302 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 359



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 991  IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 1050

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 1051 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAKDGKL 1108

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 1109 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 1167

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 1168 QLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 1215

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 1216 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 1275

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 1276 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 1334

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 1335 LQGKKVNRVACGSAHTLA 1352



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
           G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 47  GKVYSCGEAT-NGRLGLGMS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 97

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 98  LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 157

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
           TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 158 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 214

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 215 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 262

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 263 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 322

Query: 486 GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
           GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 323 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 362



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 1093 SEGEVYSWGEAK-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 1142

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 1143 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT 1202

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 1203 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 1261

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 1262 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 1309

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 1310 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 1356

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 1357 --KPASAGKLPAQV--PMEYNHLQEI 1378



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 163/323 (50%), Gaps = 26/323 (8%)

Query: 259 EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGL 318
           ++LGG  G    S +  P   + L  +NV  VA G     AVT+ G +Y+ G      G 
Sbjct: 6   DQLGGLKG----SKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG--EATNGR 59

Query: 319 LGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G+G  G LGH 
Sbjct: 60  LGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF 118

Query: 376 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
            R++   PR +++LK  R    ACG  H+AA+             SSG+L+TWG G+ GR
Sbjct: 119 SRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGR 166

Query: 436 LGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDPKA 493
           LGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G   +G+LG   +
Sbjct: 167 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 226

Query: 494 NG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
            G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGHG       P 
Sbjct: 227 EGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQ 285

Query: 553 LVEALKDKQVKSIVCGTSFTAAI 575
           +VE L+ K++  +  G     A+
Sbjct: 286 VVEGLRGKKIVHVAVGALHCLAV 308



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 34/394 (8%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 989  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 1048

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 1049 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKD 1105

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 1106 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 1153

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 1154 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 1213

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 1214 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 1272

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAIC-----LHKWVSGVDQSMCSGC-------RI 594
                P  V+ L+ K+V +I  G S     C     ++ W    +  +  G        R+
Sbjct: 1273 HVRRPRQVQGLQGKKVIAIATG-SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 1331

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAP 628
                + K+ N   CG  +    S+ K   A   P
Sbjct: 1332 VAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 1365



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150 GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
           G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 110 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 167

Query: 205 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
           G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 168 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 218

Query: 263 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
           G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 219 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 276

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
           +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 277 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 335

Query: 383 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
           P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 336 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 369



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407 VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
           VV+V  GS S    +  GK+++ G+   GRLG G     + +P  + AL      +V+  
Sbjct: 30  VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 89

Query: 464 -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
            G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 90  SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 148

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
            LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 149 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 208

Query: 578 --HKWVSG----VDQSMCSGCRIPFNFKR 600
               W  G    + +    GC IP N +R
Sbjct: 209 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 237



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 988  SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 1038

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 1039 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1095

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 1096 EVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 1155

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 1156 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 1215

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 1216 RGGSDGCKVPMKI 1228


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/356 (33%), Positives = 188/356 (52%), Gaps = 18/356 (5%)

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDA 281
            VP   E+   L+V  +A G +    VT +G+V++ GE   GRLG G+ S  V  P+ + A
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTA 3045

Query: 282  LKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            L +  V+ VA   G  H  A+T+ G +++WG  +   G LGH + M+   P+ +   L+ 
Sbjct: 3046 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD--DGKLGHFSRMNCDKPRLIEA-LKT 3102

Query: 340  IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
              +  ++CG  H+A +TS+G+L+T+G G +G LGHGD  +   P+ V  L G R ++ AC
Sbjct: 3103 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162

Query: 400  GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
            G             + + +    G +F+WGDGD G+LG G  E   +P  +  L     C
Sbjct: 3163 G----------SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 3212

Query: 460  QVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDY 518
            Q+ CG   ++ALT +G V+T G   Y +LG     + + P  VEG   K  V  +A G  
Sbjct: 3213 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH-VAVGAL 3271

Query: 519  HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            H   +T   +VY WG   +G+ G+G T     P+LV+ L+ +++  + CG+S + A
Sbjct: 3272 HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3960 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4019

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4020 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4077

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI +  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4078 GHGNRSPCDRPRVIES-LRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4136

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4137 QLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4184

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4185 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4244

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4245 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPA 4303

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4304 LQGKKVNRVACGSAHTLA 4321



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ V +     V+ +A   GGRHA  
Sbjct: 3015 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQVTALSSYVVKKVAVHSGGRHATA 3065

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3066 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3125

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3126 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3182

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3183 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3230

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 3231 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3290

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3291 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   +++ ++A GG H+A 
Sbjct: 4062 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIELVDVAAGGAHSAC 4111

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  VACG      + L+ D  
Sbjct: 4112 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT 4171

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4172 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4230

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4231 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4278

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  V AL      +V+CG + T+A +T+             
Sbjct: 4279 WGDNDEGQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAHTLAWSTS------------- 4325

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLPT+V   +  N ++EI
Sbjct: 4326 --KPASAGKLPTQV--PMEYNHLQEI 4347



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 156/311 (50%), Gaps = 22/311 (7%)

Query: 271  SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWL 329
            S +  P   + L  +NV  VA G     AVT+ G +Y  G      G LG G +  ++ +
Sbjct: 2982 SQIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG--EATNGRLGLGISSGTVPI 3039

Query: 330  PKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 387
            P+++   L    V  V+   G  H   +T  G++F++G+G  G LGH  R++   PR ++
Sbjct: 3040 PRQVTA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3098

Query: 388  SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
            +LK  R    ACG  H+AA+             SSG+L+TWG G+ GRLGHGD   +L P
Sbjct: 3099 ALKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGDNTTQLKP 3146

Query: 448  TCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGK 504
              V  L+     QV+CG   + T+ALT  G V++ G   +G+LG   + G  +P  +E +
Sbjct: 3147 KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-R 3205

Query: 505  LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKS 564
            L    V +I CG      LT    V+TWGKG   RLGHG       P +VE L+ K++  
Sbjct: 3206 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3265

Query: 565  IVCGTSFTAAI 575
            +  G     A+
Sbjct: 3266 VAVGALHCLAV 3276



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4017

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4018 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4074

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4075 GKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVT------------AAGDLYTWG 4122

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 4123 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4182

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4183 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4241

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4242 HVRRPRQVQGLQGKKVIAIATGS 4264



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 480 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   VP  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 156/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P+ +  L   +   ++CG + + A
Sbjct: 748 VTKPEPSALPGLDTKHIVGIACGPAQSFA 776



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3135

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3136 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3244

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 3245 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3303

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V + + S
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVAWTTVDMATPS 3337



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  V AL      +V+  
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVH 3057

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3058 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3116

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3117 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3176

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3177 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3205



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3957 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4007

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4008 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4064

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    + ++A G  H A +T+  ++YTWGKG
Sbjct: 4065 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKG 4124

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  + CG+     +CL        W  G    + 
Sbjct: 4125 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4184

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4185 RGGSDGCKVPMKI 4197


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/335 (35%), Positives = 169/335 (50%), Gaps = 16/335 (4%)

Query: 224 PKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           P  V +    ++ ++ CG  H  AL      V+SWG    GRLGHG  SD+  P+ I AL
Sbjct: 57  PTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKAL 116

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           K + V+ +ACG+ H  A+T  G++  WG  N N G LG G+   +  P KL    EG+ V
Sbjct: 117 KGLEVKQIACGDSHCLAITTDGEVLGWG-RNQN-GQLGLGHTEDVLTPHKLT-AFEGVAV 173

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
             ++ G  HT  VT  G+L+ +G G +G LG GDR     P +V ++ G      ACG  
Sbjct: 174 KMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWR 233

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
           HT  V E            SG ++T+G    G+LGHGD    L+P  V AL       ++
Sbjct: 234 HTICVAE------------SGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAIT 281

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
            G   T AL + G +Y  G   +GQ+G      +   ++   L    V  + CG  H   
Sbjct: 282 GGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLA 341

Query: 523 LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
           +T R  VY+WG+G +G+LGHGDT DR+ P  +E L
Sbjct: 342 MTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEIL 376



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 179/343 (52%), Gaps = 18/343 (5%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V  ++ G  H+  +     V SWG    G+LGHG   +   P ++ AL +  +  V CG 
Sbjct: 16  VLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGA 75

Query: 295 HHTCAVTLSGD-MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT A++ S   +Y+WG  +  FG LGHGN   L++P+ +   L+G+ V  ++CG  H  
Sbjct: 76  DHTTALSNSTKTVYSWGWGD--FGRLGHGNSSDLFIPQPIK-ALKGLEVKQIACGDSHCL 132

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            +T+ G++  +G    G LG G    V TP ++ + +G+     A G  HT AV E    
Sbjct: 133 AITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTE---- 188

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                   +GKL+ WG G  G LG GD+E RLVP  VAA+       V+CG   T+ +  
Sbjct: 189 --------NGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAE 240

Query: 474 TGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
           +G++YT G   YGQLG    A+  +P +V+   +K  ++ I  G  H   L S   +Y W
Sbjct: 241 SGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKK-IQAITGGWRHTFALDSDGRLYGW 299

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G    G++G G+T+D++ P LV+ L+D+ V  + CG   T A+
Sbjct: 300 GWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAM 342



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 129/280 (46%), Gaps = 45/280 (16%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D F+P+ +++   L+V+ IACG  H   +T  GEV  WG    G+LG G   DV  P  +
Sbjct: 106 DLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKL 165

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            A + + V+++A G  HT AVT +G +Y WG     +G LG G+     +P ++   + G
Sbjct: 166 TAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGR--YGNLGLGDREDRLVPDQV-AAVAG 222

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
             +  V+CG  HT  V  +G ++TFG   +G LGHGD      P +V +LK  + ++A  
Sbjct: 223 ELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKS-KKIQAIT 281

Query: 400 GVW-HTAAVVEV------------MVGSSSSSNCSS------------------------ 422
           G W HT A+                VG  ++ + SS                        
Sbjct: 282 GGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLA 341

Query: 423 ----GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
               G +++WG G  G+LGHGD   R  P  +  L    F
Sbjct: 342 MTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSDGF 381


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/379 (34%), Positives = 192/379 (50%), Gaps = 24/379 (6%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            D  + G C    + GGG H  G  A        P    S      Q I CG     ++  
Sbjct: 3176 DWMLGGRCEA-YMWGGGRH--GQLAETGRSLLTPTVTPS--FSQAQQIICGQNCTFVIQA 3230

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 3231 NGTVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3290

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  +  ++CG  H+AVV++ G+LFTFG+G
Sbjct: 3291 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEIIQMACGFKHSAVVSADGKLFTFGNG 3347

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P  V +L+G    +  CG+ HT AV           +     +++
Sbjct: 3348 DYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTLAV-----------SADGNTVWS 3396

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP-VYG 486
            +GDGD G+LG G+  A+  P  V  L      +V CG   +VALT  G V+T G   + G
Sbjct: 3397 FGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLIG 3456

Query: 487  QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            Q      N   P +V   L   FVE++  G  H   LTS  EV+ WG   +G+LG GDT+
Sbjct: 3457 QPESRSRNHNRPQQVPA-LEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTN 3515

Query: 547  DRNFPSLVEALKDKQVKSI 565
             R  P LV AL+ K V+ +
Sbjct: 3516 ARREPCLVTALQGKNVRQV 3534



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 167/342 (48%), Gaps = 55/342 (16%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   +  +ACG  H+
Sbjct: 3273 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHS 3332

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              V+  G ++T+G  N ++G LG GN  +  +P+++   LEG  V  V CG  HT  V++
Sbjct: 3333 AVVSADGKLFTFG--NGDYGRLGLGNTSNKKIPERVTA-LEGQMVGQVGCGLNHTLAVSA 3389

Query: 358  AGQ-LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G  +++FGDG +G LG G+  + STP+ VD L G+   +  CG   + A+ +       
Sbjct: 3390 DGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTK------- 3442

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEAR------LVPTCVAALVEPNFCQVSCGHSLTVA 470
                  G++FT+  G    +G  +  +R       VP   A  VE     V  G   ++A
Sbjct: 3443 -----DGRVFTF--GQERLIGQPESRSRNHNRPQQVPALEAFFVE----DVVVGAEHSLA 3491

Query: 471  LTTTGHVYTMGSPVYGQLGDPKANGK----LPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            LT+TG V+  GS   GQLG    N +    L T ++GK  +                   
Sbjct: 3492 LTSTGEVWAWGSNGDGQLGIGDTNARREPCLVTALQGKNVRQ------------------ 3533

Query: 527  TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
                 WG   +G+LG GDT+ R  P LV  L+ K V+ I  G
Sbjct: 3534 ----VWGSNGDGQLGIGDTNARREPCLVTDLQGKNVRQISAG 3571



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 158/333 (47%), Gaps = 44/333 (13%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D  ++++ SA    V +    S   DG S+     
Sbjct: 3236 ACGE-------GSYGRLG--QGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTES 3286

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    ++  +ACG +H+A+V
Sbjct: 3287 GEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALQGEEIIQMACGFKHSAVV 3335

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            +  G++F++G    GRLG G  S+   P+ + AL+   V  V CG +HT AV+  G+   
Sbjct: 3336 SADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNT-V 3394

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            W   + ++G LG GN  +   P++++ PL GI V  V CG   +  +T  G++FTFG   
Sbjct: 3395 WSFGDGDYGKLGLGNSTAKSTPQRVD-PLCGIGVKKVCCGTQFSVALTKDGRVFTFGQER 3453

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
                      + + P++V +L+         G  H+ A+             S+G+++ W
Sbjct: 3454 LIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALT------------STGEVWAW 3501

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            G    G+LG GD  AR  P  V AL   N  QV
Sbjct: 3502 GSNGDGQLGIGDTNARREPCLVTALQGKNVRQV 3534



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 118/233 (50%), Gaps = 12/233 (5%)

Query: 345  VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
            + CG   T V+ + G +   G+G++G LG G+          D L  L  + A  G   T
Sbjct: 3218 IICGQNCTFVIQANGTVQACGEGSYGRLGQGNS---------DDLHQLTIISALQGFVVT 3268

Query: 405  AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
              V        S +   SG++F+WGDGD G+LGHG+ + +  P  + AL      Q++CG
Sbjct: 3269 QLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACG 3328

Query: 465  HSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAV 522
               +  ++  G ++T G+  YG+LG    +N K+P RV   L    V ++ CG  H +AV
Sbjct: 3329 FKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTA-LEGQMVGQVGCGLNHTLAV 3387

Query: 523  LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                  V+++G G  G+LG G++  ++ P  V+ L    VK + CGT F+ A+
Sbjct: 3388 SADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVAL 3440



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 9/96 (9%)

Query: 478  YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF--VEEIACGDYHVAVLTSRTEVYTWGKG 535
            Y  G   +GQL +   +   PT     +T +F   ++I CG     V+ +   V   G+G
Sbjct: 3186 YMWGGGRHGQLAETGRSLLTPT-----VTPSFSQAQQIICGQNCTFVIQANGTVQACGEG 3240

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIV--CGT 569
            + GRLG G++DD +  +++ AL+   V  +V  CG+
Sbjct: 3241 SYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGS 3276


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 198/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2962 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V+S GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++ G  H+A +TS+G+L+T+G G 
Sbjct: 3072 WGEGD--DGKLGHFSRMNCDKPRLIQA-LKTKRIRDIAYGSSHSAPLTSSGELYTWGLGE 3128

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3178

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3297

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4015

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4016 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4073

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 4074 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4132

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4133 QLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4241 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4299

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4300 LQGKKVNRVACGSAHTLA 4317



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 4058 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4107

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT 4167

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4227 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4274

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4321

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4322 --KPASAGKLPAQV--PMEYNHLQEI 4343



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 114/341 (33%), Positives = 165/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3012 GKVYSCGEAT-NGRLGLGMS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3062

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI ALK   +  +A G  H+  +T SG++Y
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELY 3122

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3123 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3227

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3288 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 164/333 (49%), Gaps = 22/333 (6%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 3017 CG--EATNGRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR + +LK  R    A G  H+A +             SSG+L
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLT------------SSGEL 3121

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 3122 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGH
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P +VE L+ K++  +  G     A+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4014 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 4071 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4118

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4179 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGS 4260



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L ++ V  VAC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---- 475

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                         +  P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 476 --------QAYNSDMLAPQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++    +     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSW 734



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 139/298 (46%), Gaps = 29/298 (9%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           + H DG       + G+V+ WG C   G LG G         V + +F  K     VV  
Sbjct: 500 AAHSDGHHYLALAATGEVYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV-- 555

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
             +IACG  ++A +T +GE+++WG    GRLGHG   D + P L+  LK + V  VAC  
Sbjct: 556 --HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 613

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+  T AVT +G +++WG  + ++G LG G       PK +   L+ + V  V CG   +
Sbjct: 614 GDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFS 670

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  GQ++++G G    LGHG    V  P+ ++ L+G + +  A G  H   + E   
Sbjct: 671 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTE--- 727

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      ++ +WG  D+ +        +  PT    L   +   ++CG + + A
Sbjct: 728 ---------DSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 776



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVSL---SSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWG--LGEYGRL 3132

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3133 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3241

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3242 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4003

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4004 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4181 RGGSDGCKVPMKI 4193



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK+++ G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  ++   TK  + +IA G  H A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKR-IRDIAYGSSHSA 3113

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3114 PLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 198/387 (51%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2872 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 2921

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V+S GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 2922 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2981

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++ G  H+A +TS+G+L+T+G G 
Sbjct: 2982 WGEGD--DGKLGHFSRMNCDKPRLIQA-LKTKRIRDIAYGSSHSAPLTSSGELYTWGLGE 3038

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3039 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3088

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 3089 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3148

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 3149 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3207

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 3208 NRKPTLVQGLEGQKITRVACGSSHSVA 3234



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3866 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3925

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3926 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 3983

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 3984 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4042

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4043 QLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4090

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4091 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4150

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4151 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4209

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4210 LQGKKVNRVACGSAHTLA 4227



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 3968 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 4017

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4018 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT 4077

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4078 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4136

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4137 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4184

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4185 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4231

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4232 --KPASAGKLPAQV--PMEYNHLQEI 4253



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/341 (33%), Positives = 165/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 2922 GKVYSCGEAT-NGRLGLGMS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 2972

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI ALK   +  +A G  H+  +T SG++Y
Sbjct: 2973 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELY 3032

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3033 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3089

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3090 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3137

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 3138 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3197

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 3198 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3237



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 164/333 (49%), Gaps = 22/333 (6%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y+
Sbjct: 2867 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 2926

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 2927 CG--EATNGRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2983

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR + +LK  R    A G  H+A +             SSG+L
Sbjct: 2984 EGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLT------------SSGEL 3031

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 3032 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3091

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGH
Sbjct: 3092 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3150

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P +VE L+ K++  +  G     A+
Sbjct: 3151 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3183



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3923

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3924 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3980

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 3981 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4028

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4029 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4088

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4089 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4147

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4148 HVRRPRQVQGLQGKKVIAIATGS 4170



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L ++ V  VAC E     ++ +G +YT    
Sbjct: 335 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---- 385

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                         +  P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 386 --------QAYNSDMLAPQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 436

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 437 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 484

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 485 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 544

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 545 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 603

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++    +     +H W
Sbjct: 604 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSW 644



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 139/298 (46%), Gaps = 29/298 (9%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           + H DG       + G+V+ WG C   G LG G         V + +F  K     VV  
Sbjct: 410 AAHSDGHHYLALAATGEVYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV-- 465

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
             +IACG  ++A +T +GE+++WG    GRLGHG   D + P L+  LK + V  VAC  
Sbjct: 466 --HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 523

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+  T AVT +G +++WG  + ++G LG G       PK +   L+ + V  V CG   +
Sbjct: 524 GDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFS 580

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  GQ++++G G    LGHG    V  P+ ++ L+G + +  A G  H   + E   
Sbjct: 581 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTE--- 637

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      ++ +WG  D+ +        +  PT    L   +   ++CG + + A
Sbjct: 638 ---------DSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 686



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVSL---SSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 2985 GDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWG--LGEYGRL 3042

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 3043 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3093

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 3094 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3151

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       
Sbjct: 3152 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3210

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3211 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3244



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3863 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3913

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3914 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3970

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 3971 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4030

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4031 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4090

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4091 RGGSDGCKVPMKI 4103



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK+++ G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2905 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 2964

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  ++   TK  + +IA G  H A
Sbjct: 2965 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKR-IRDIAYGSSHSA 3023

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3024 PLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3083

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3084 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3112


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 188/356 (52%), Gaps = 18/356 (5%)

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDA 281
            VP   E+   L+V  +A G +    VT +G+V++ GE   GRLG G+ S  V  P+ + A
Sbjct: 1287 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTA 1346

Query: 282  LKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            L +  V+ VA   G  H  A+T+ G +++WG    + G LGH + M+   P+ +   L+ 
Sbjct: 1347 LSSYVVKKVAVHSGGRHATALTVDGKVFSWG--EGDDGKLGHFSRMNCDKPRLIEA-LKT 1403

Query: 340  IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
              +  ++CG  H+A +TS+G+L+T+G G +G LGHGD  +   P+ V  L G R V+ AC
Sbjct: 1404 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVAC 1463

Query: 400  GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
            G             + + +    G +F+WGDGD G+LG G  E   +P  +  L     C
Sbjct: 1464 G----------SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 1513

Query: 460  QVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDY 518
            Q+ CG   ++ALT +G V+T G   Y +LG     + + P  VEG   K  V  +A G  
Sbjct: 1514 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH-VAVGAL 1572

Query: 519  HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            H   +T   +VY WG   +G+ G+G T     P+LV+ L+ +++  + CG+S + A
Sbjct: 1573 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1628



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 189/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 2262 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGA 2321

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 2322 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 2379

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHG+      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 2380 GHGSRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 2438

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 2439 QLKPKLVEALQGHRVVGIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 2486

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT  G VYT G   Y +LG    +  +
Sbjct: 2487 RGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVR 2546

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 2547 RPRQVQGLQGKKAI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 2605

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 2606 LQGKKVNRVACGSAHTLA 2623



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ V +     V+ +A   GGRHA  
Sbjct: 1316 GKVYACGEAT-NGRLGLGLS-SGTVP-------LPRQVTALSSYVVKKVAVHSGGRHATA 1366

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 1367 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 1426

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 1427 TWGLG--EYGRLGHGDTTTQLKPKMVK-VLLGHRVVQVACGSRDAQTLALTDEGLVFSWG 1483

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 1484 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 1531

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 1532 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 1591

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 1592 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 1631



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 158/326 (48%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G                P+ +ES   ++V ++A GG H+A 
Sbjct: 2364 SEGEVYSWGEAE-DGKLGHGSRSPCDR---------PRVIESLRGIEVVDVAAGGAHSAC 2413

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 2414 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDT 2473

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T AG ++T+G G
Sbjct: 2474 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVRVECGSQFSVALTKAGAVYTWGKG 2532

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 2533 DYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTE------------DGEVYT 2580

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 2581 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 2627

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++E+
Sbjct: 2628 --KPASAGKLPAQV--PMEYNHLQEL 2649



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 156/310 (50%), Gaps = 24/310 (7%)

Query: 273  VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGL-LGHGNEMSLWLP 330
            +  P   + L  +NV  VA G     AVT+ G +Y  G  +N   GL L  G   ++ LP
Sbjct: 1285 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSG---TVPLP 1341

Query: 331  KKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS 388
            +++   L    V  V+   G  H   +T  G++F++G+G  G LGH  R++   PR +++
Sbjct: 1342 RQVTA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 1400

Query: 389  LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
            LK  R    ACG  H+AA+             SSG+L+TWG G+ GRLGHGD   +L P 
Sbjct: 1401 LKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGDTTTQLKPK 1448

Query: 449  CVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKL 505
             V  L+     QV+CG   + T+ALT  G V++ G   +G+LG   + G  +P  +E +L
Sbjct: 1449 MVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RL 1507

Query: 506  TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
                V +I CG      LT    V+TWGKG   RLGHG       P +VE L+ K++  +
Sbjct: 1508 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHV 1567

Query: 566  VCGTSFTAAI 575
              G     A+
Sbjct: 1568 AVGALHCLAV 1577



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 154/323 (47%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 2319

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 2320 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2376

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 2377 GKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 2424

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 2425 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGK 2484

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V  + CG      LT    VYTWGKG   RLGHG  D
Sbjct: 2485 LGRGGSDGCKVPMKID-SLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDD 2543

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+  +I  G+
Sbjct: 2544 HVRRPRQVQGLQGKKAIAIATGS 2566



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 128/273 (46%), Gaps = 19/273 (6%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILG 205
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG         
Sbjct: 1379 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL-------- 1430

Query: 206  GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELGG 263
            G   R G   G       PK V+  +   V  +ACG R A  +  T +G VFSWG+   G
Sbjct: 1431 GEYGRLGH--GDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFG 1488

Query: 264  RLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN 323
            +LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG+
Sbjct: 1489 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHGS 1546

Query: 324  EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 383
            ++ +  P+ + G L G  +  V+ G  H   VT +GQ++ +GD   G  G+G       P
Sbjct: 1547 DVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKP 1605

Query: 384  REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
              V  L+G +  R ACG  H+ A   V V + S
Sbjct: 1606 TLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 1638



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  V AL      +V+  
Sbjct: 1299 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVH 1358

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 1359 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 1417

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGDT  +  P +V+ L   +V  + CG+     + L    
Sbjct: 1418 ALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEG 1477

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 1478 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 1506



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 10/189 (5%)

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            C  +H    + +    SS  +C    L   G   R R    D  A  VP+    L   N 
Sbjct: 1243 CAEYHRYVEIAIKQCRSSGIDCKIHGLILLG---RIRAEEEDLAAIKVPSFSETLSALNV 1299

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIAC-- 515
             QV+ G     A+T  G VY  G    G+LG   ++G +P  R    L+   V+++A   
Sbjct: 1300 VQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHS 1359

Query: 516  GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G  H   LT   +V++WG+G +G+LGH    + + P L+EALK K+++ I CG+S +AA+
Sbjct: 1360 GGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 1419

Query: 576  C----LHKW 580
                 L+ W
Sbjct: 1420 TSSGELYTW 1428



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 2259 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 2309

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 2310 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2366

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 2367 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2426

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 2427 RYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 2486

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 2487 RGGSDGCKVPMKI 2499


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 196/387 (50%), Gaps = 28/387 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+   +A G +    VT +
Sbjct: 1796 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNAVQVAGGSKSLFAVTVE 1845

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG GV S  V  P+ + AL +  V+ VA   G  H  A+T  G +++
Sbjct: 1846 GKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFS 1905

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG    + G LGH +  +   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 1906 WG--EGDDGKLGHFSRXNCDKPRLIEA-LKSRRIRDIACGSSHSAALTSSGELYTWGLGE 1962

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R V+ ACG             + + +    G +F+W
Sbjct: 1963 YGRLGHGDNTTQLKPKMVKVLVGHRVVQVACG----------SRDAQTLALTDEGLVFSW 2012

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   VP  +  L     CQ+ CG   ++ALT +G V+T G   Y +L
Sbjct: 2013 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2072

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P  VEG   K  V  +A G  H   +T   +VY WG   +G+ G+G T  
Sbjct: 2073 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 2131

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+LV+ L+ +++  + CG+S + A
Sbjct: 2132 NRKPTLVQGLEGQKITRVACGSSHSVA 2158



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            + G G +  G   GV+     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 2790 VYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVTADGKLYATGYGA 2849

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 2850 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 2907

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 2908 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSED 2966

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 2967 QLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTEDDTVWSWGDGDYGKLG 3014

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  V AL      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 3015 RGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3074

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 3075 RPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 3133

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 3134 LQGKKVNRVACGSAHTLA 3151



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 168/341 (49%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         VP+ V +     V+ +A   GGRHA  
Sbjct: 1846 GKVYACGEAT-NGRLGLGVS-SGTVP-------VPRQVTALSSYVVKKVAVHSGGRHATA 1896

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK+  +  +ACG  H+ A+T SG++Y
Sbjct: 1897 LTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELY 1956

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 1957 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLVGHRVVQVACGSRDAQTLALTDEGLVFSWG 2013

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 2014 DGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 2061

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 2062 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 2121

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 2122 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2161



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 171/347 (49%), Gaps = 24/347 (6%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +N   VA G 
Sbjct: 1779 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGS 1836

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 351
                AVT+ G +Y  G      G LG G +  ++ +P+++   L    V  V+   G  H
Sbjct: 1837 KSLFAVTVEGKVYACG--EATNGRLGLGVSSGTVPVPRQVTA-LSSYVVKKVAVHSGGRH 1893

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
               +T+ G++F++G+G  G LGH  R +   PR +++LK  R    ACG  H+AA+    
Sbjct: 1894 ATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALT--- 1950

Query: 412  VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV 469
                     SSG+L+TWG G+ GRLGHGD   +L P  V  LV     QV+CG   + T+
Sbjct: 1951 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTL 2001

Query: 470  ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT    
Sbjct: 2002 ALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 2060

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+TWGKG   RLGHG       P +VE L+ K++  +  G     A+
Sbjct: 2061 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2107



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 153/314 (48%), Gaps = 38/314 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 2892 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 2941

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G +++WG+   GRLGH    D   PKL++AL+   V  VACG      + L+ D  
Sbjct: 2942 VTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDT 3001

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+    V CG   +  +T +G ++T+G G
Sbjct: 3002 VWSWGDGDYGKLGRGGSDGCKVPMKVDA-LTGLGAVKVECGSQFSVALTKSGAVYTWGKG 3060

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 3061 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 3108

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 3109 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 3155

Query: 488  LGDPKANGKLPTRV 501
               P + GKLP +V
Sbjct: 3156 --KPASAGKLPAQV 3167



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 131/274 (47%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH    + D  R+     S  +   + GS H     S G+++ WG   G+ G L
Sbjct: 1909 GDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 1966

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  V   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 1967 GHGDNTT---------QLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDF 2017

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 2018 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 2075

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 2076 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 2134

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 2135 PTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 2168



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 19/277 (6%)

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            SG +Y WG ++   G LG      + +P      L  +  + +  G      VT+ G+L+
Sbjct: 2787 SGTVYGWGHNH--RGQLGGVEGAKVKVPTPCEA-LAALRPAQLIGGEQTLFAVTADGKLY 2843

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
              G G  G LG G   SVSTP  ++S++   ++ V    G  H  A+             
Sbjct: 2844 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL------------S 2891

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            S G++++WG+ + G+LGHG++     P  + +L       V+ G + +  +T  G +YT 
Sbjct: 2892 SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTW 2951

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANG 538
            G   YG+LG   +  +L  ++   L  + V ++ACG  D     LT    V++WG G  G
Sbjct: 2952 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYG 3011

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +LG G +D    P  V+AL       + CG+ F+ A+
Sbjct: 3012 KLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVAL 3048



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 111/255 (43%), Gaps = 27/255 (10%)

Query: 360  QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            ++F +G      LG      +  P   ++L  L  V+ A G   + ++  V V       
Sbjct: 1795 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGG---SKSLFAVTV------- 1844

Query: 420  CSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC--GHSLTVALTTTGH 476
               GK++  G+   GRLG G     + VP  V AL      +V+   G     ALT  G 
Sbjct: 1845 --EGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGK 1902

Query: 477  VYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            V++ G    G+LG   + N   P  +E  L    + +IACG  H A LTS  E+YTWG G
Sbjct: 1903 VFSWGEGDDGKLGHFSRXNCDKPRLIEA-LKSRRIRDIACGSSHSAALTSSGELYTWGLG 1961

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL------HKWVSG----VD 585
              GRLGHGD   +  P +V+ L   +V  + CG+     + L        W  G    + 
Sbjct: 1962 EYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2021

Query: 586  QSMCSGCRIPFNFKR 600
            +    GC +P N +R
Sbjct: 2022 RGGSEGCNVPQNIER 2036



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 115/252 (45%), Gaps = 24/252 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR  +   G     AV          
Sbjct: 2787 SGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVT--------- 2837

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 2838 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2894

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+   +YTWGKG
Sbjct: 2895 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKG 2954

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  + CG+     +CL +      W  G    + 
Sbjct: 2955 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLG 3014

Query: 586  QSMCSGCRIPFN 597
            +    GC++P  
Sbjct: 3015 RGGSDGCKVPMK 3026


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 190/387 (49%), Gaps = 30/387 (7%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  AG   +  VP    S  +   Q + CG   + L+  
Sbjct: 3021 DVYLWGN-----------GRYGQLAGTGTNLTVPTLAPS--LSQTQQVVCGQNCSFLIQS 3067

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+  P +I A +   V +LV +CG + H+ A+T +G+++
Sbjct: 3068 NGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVF 3127

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LGHGN      PK++   L+G  V  ++CG  H+AVVT+ G+LFTFG G
Sbjct: 3128 SWG--DGDFGKLGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTADGKLFTFGSG 3184

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
              G LG     +   P  V +L+G    + +CG+ HT  +           +     ++ 
Sbjct: 3185 ESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVL-----------SLDGMAVWA 3233

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G   A+  P  V  L      +V CG   +V +   GHVYT G      
Sbjct: 3234 FGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIG 3293

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            L D     +   +V   L   F+E+IA G  HV  L+S  +VY WG  + G+LG G  + 
Sbjct: 3294 LPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNP 3353

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P+L+ AL+ K +K I  G   ++A
Sbjct: 3354 VKEPTLITALQGKNIKQISAGRCHSSA 3380



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 205/446 (45%), Gaps = 41/446 (9%)

Query: 175 SSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           SS+   S   +GD++  V++WG  +   +  G + +            +PK  +     D
Sbjct: 367 SSTDAASPGTEGDAV-TVYVWGSNSSHQLAEGTLEKI----------LLPKLTQG--FSD 413

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG- 293
            Q I  G      V+  G V + G+   GRLG G  ++ S PK +    + N++ V+   
Sbjct: 414 AQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSK 473

Query: 294 --EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
             + HT A+T+ G++++WG  +  +G LGHGN  +   PK + GPL    V S S G  H
Sbjct: 474 GSDGHTLAITVDGEVFSWG--DGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRH 531

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +A VT  G+L+T+G+G FG LGH D  S + P  V  + G+  V  ACG  HT AV +  
Sbjct: 532 SAAVTKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVGQV--ACGSSHTIAVAQ-- 587

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                        ++++G GD G+LGHGD      P  + AL      +V  G   ++AL
Sbjct: 588 ---------DGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLAL 638

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
           T+ G V+  G       G  +     P  VE  L+   + +I+CGD H   L+   EVY 
Sbjct: 639 TSAGQVFAWGCGSCLGCGSSETTSLRPRFVE-DLSITKIIDISCGDSHCLALSHENEVYA 697

Query: 532 WGKGANGRLGHGDTDDR-NFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVS-GVDQSMC 589
           WG    G+ G G T      P  V  L+   ++ I  GTS + A     W +   D+ + 
Sbjct: 698 WGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLA-----WTAVPTDRQLV 752

Query: 590 SGCRIPFNFKRKRHN-CYNCGLVYCH 614
           +  R PF    +     Y C  + C+
Sbjct: 753 AWHR-PFCVDLEESTFTYLCNFLKCY 777



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 168/361 (46%), Gaps = 36/361 (9%)

Query: 144  NSLSSGGSDGRTGHL-KGLSGDTFRVSLSSA----VSSSSQGSGHDDGDSL-----GDVF 193
            N + +   +G+ G L +G S D +  ++ SA    V +    S   DG S+     G+VF
Sbjct: 3068 NGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVF 3127

Query: 194  IWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
             WG+  GD G LG G +              PK +E+    DV  +ACG RH+A+VT  G
Sbjct: 3128 SWGD--GDFGKLGHGNNERQRR---------PKQIEALQGEDVVQLACGFRHSAVVTADG 3176

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
            ++F++G    GRLG    S+   P+ + AL+  +V  V+CG +HT  ++L G M  W   
Sbjct: 3177 KLFTFGSGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDG-MAVWAFG 3235

Query: 313  NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
            + ++G LG G+  + + P+K+   L    +  V CG   + VV   G ++TFG      L
Sbjct: 3236 DGDYGKLGAGSSTAKYYPQKVE-QLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGL 3294

Query: 373  GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
                  + S P+ V SL+GL     A G  H  A+             S+G ++ WG   
Sbjct: 3295 PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLAL------------SSTGDVYAWGCNS 3342

Query: 433  RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
             G+LG G       PT + AL   N  Q+S G   + A TT       G P   QLG P+
Sbjct: 3343 EGQLGLGHCNPVKEPTLITALQGKNIKQISAGRCHSSAWTTPSTSKNSGGPGNLQLGLPQ 3402

Query: 493  A 493
            +
Sbjct: 3403 S 3403



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 146/305 (47%), Gaps = 26/305 (8%)

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            D+Y WG  N  +G L  G   +L +P  L   L       V CG   + ++ S G +   
Sbjct: 3021 DVYLWG--NGRYGQLA-GTGTNLTVPT-LAPSLS--QTQQVVCGQNCSFLIQSNGVVTAV 3074

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGV-WHTAAVVEVMVGSSSSSNCS 421
            G+G +G LG G+   +  P  + + +G  +  +  +CG   H+ A+ E            
Sbjct: 3075 GEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTE------------ 3122

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            +G++F+WGDGD G+LGHG+ E +  P  + AL   +  Q++CG   +  +T  G ++T G
Sbjct: 3123 TGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFG 3182

Query: 482  SPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT-SRTEVYTWGKGANGR 539
            S   G+LG    +N  LP RV   L    V +++CG  H  VL+     V+ +G G  G+
Sbjct: 3183 SGESGRLGQRSTSNKMLPERV-AALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGK 3241

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFK 599
            LG G +  + +P  VE L +K +K + CG  F+  +     V    Q    G  +P +  
Sbjct: 3242 LGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIG--LPDSML 3299

Query: 600  RKRHN 604
            + R N
Sbjct: 3300 KNRSN 3304


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 189/358 (52%), Gaps = 22/358 (6%)

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDA 281
            VP   E+   L+V  +A G +    VT +G+V++ GE   GRLG G+ S  V  P+ + A
Sbjct: 2686 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTA 2745

Query: 282  LKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            L +  V+ VA   G  H  A+T+ G +++WG    + G LGH + M+   P+ +   L+ 
Sbjct: 2746 LSSYVVKKVAVHSGGRHATALTVDGKVFSWG--EGDDGKLGHFSRMNCDKPRLIEA-LKT 2802

Query: 340  IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
              +  ++CG  H+A +TS+G+L+T+G G +G LGHGD  +   P+ V  L G R ++ AC
Sbjct: 2803 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2862

Query: 400  GV--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
            G     T A+ +             G +F+WGDGD G+LG G  E   VP  +  L    
Sbjct: 2863 GSRDAQTLALTD------------EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG 2910

Query: 458  FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACG 516
             CQ+ CG   ++ALT +G V+T G   Y +LG     + + P  VEG   K  V  +A G
Sbjct: 2911 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH-VAVG 2969

Query: 517  DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              H   +T   +VY WG   +G+ G+G T     P+LV+ L+ +++  + CG+S + A
Sbjct: 2970 ALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3027



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 184/372 (49%), Gaps = 40/372 (10%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L V  IAC  +   ++++ G V++             +SD   P+L+  L + N+  +A 
Sbjct: 452 LGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLASRNIVKIAA 501

Query: 293 GE--HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN---GPLEGIHVSSVSC 347
               HH  A+  +G++Y+WG  +   G LGHG+ + L  PK ++   G   G HV  ++C
Sbjct: 502 HSDGHHYLALAATGEVYSWGCGDG--GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 559

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  ++A +T+ G+L+T+G G +G LGHG     + P  V  LKGL+ +  ACG      +
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPL 619

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
                     +   +G++++WGDGD G+LG G  +    P  +  L + +  +V CG   
Sbjct: 620 ----------AVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669

Query: 468 TVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           +VALT  G VY+ G     +LG   + + + P  +E    K  ++ +A G  H   LT  
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVID-VAAGSTHCLALTED 728

Query: 527 TEVYTWGKGANGRLGHGDT--DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGV 584
           +EV++WG   N +  H DT    +  PSL+  L  K +  I CG + + A     W S  
Sbjct: 729 SEVHSWGN--NDQCQHFDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFA-----WSSCS 781

Query: 585 DQSMCSGCRIPF 596
           + S+  G R+PF
Sbjct: 782 EWSV--GLRVPF 791



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ V +     V+ +A   GGRHA  
Sbjct: 2715 GKVYACGEAT-NGRLGLGMS-SGTVP-------IPRQVTALSSYVVKKVAVHSGGRHATA 2765

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 2766 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 2825

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 2826 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 2882

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 2883 DGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 2930

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T  G VY  G   +
Sbjct: 2931 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 2990

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GQ G+      + PT V+G L    +  +ACG  H    T+
Sbjct: 2991 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3030



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 157/311 (50%), Gaps = 22/311 (7%)

Query: 271  SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWL 329
            +++  P   + L  +NV  VA G     AVT+ G +Y  G      G LG G +  ++ +
Sbjct: 2682 TEIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG--EATNGRLGLGMSSGTVPI 2739

Query: 330  PKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 387
            P+++   L    V  V+   G  H   +T  G++F++G+G  G LGH  R++   PR ++
Sbjct: 2740 PRQVTA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 2798

Query: 388  SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
            +LK  R    ACG  H+AA+             SSG+L+TWG G+ GRLGHGD   +L P
Sbjct: 2799 ALKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGDNTTQLKP 2846

Query: 448  TCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGK 504
              V  L+     QV+CG   + T+ALT  G V++ G   +G+LG   + G  +P  +E +
Sbjct: 2847 KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIE-R 2905

Query: 505  LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKS 564
            L    V +I CG      LT    V+TWGKG   RLGHG       P +VE L+ K++  
Sbjct: 2906 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 2965

Query: 565  IVCGTSFTAAI 575
            +  G     A+
Sbjct: 2966 VAVGALHCLAV 2976



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 152/306 (49%), Gaps = 25/306 (8%)

Query: 220 DSFVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           D+  P+ V+     ++  IA    G H   +   GEV+SWG   GGRLGHG    +  PK
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 540

Query: 278 LIDALKNI----NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
           +I A        +V  +ACG  ++ A+T  G++YTWG    N+G LGHG+     +P  +
Sbjct: 541 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLV 598

Query: 334 NGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
            G L+G+ V  V+CG        VT  GQ++++GDG +G LG G      TP+ ++ L+ 
Sbjct: 599 AG-LKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
           L  V+  CG   + A+ +             G++++WG GD  RLGHG +E    P  + 
Sbjct: 658 LDVVKVRCGSQFSVALTK------------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFV 510
           AL       V+ G +  +ALT    V++ G+    Q  D     K  P+ + G  TK+ V
Sbjct: 706 ALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQHFDTLHQTKPEPSLLPGLDTKHIV 765

Query: 511 EEIACG 516
             IACG
Sbjct: 766 -GIACG 770



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 163/341 (47%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P     L N+ V  +AC E     ++ +G +YT   +
Sbjct: 425 EVIGWG-----LIGWKCYANVIGPIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 480 SDTLA------------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   +  +A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+EAL+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 152/326 (46%), Gaps = 48/326 (14%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ VES    +V +IA GG H+A 
Sbjct: 3735 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVVESLRGTEVVDIAAGGAHSAC 3784

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  VACG      + L+ D  
Sbjct: 3785 VTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT 3844

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K+  PL  + V   S  P       S  +L   G G
Sbjct: 3845 VWSWGDGDYGKLGRGGSDGCKVPMKV--PLS-LRVGRPSTPP------PSWPRLDVGGKG 3895

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 3896 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------EGEVYT 3943

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 3944 WGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGSAHTLAWSTS------------- 3990

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++E+
Sbjct: 3991 --KPASAGKLPAQV--PMEYNHLQEL 4012



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 158/372 (42%), Gaps = 65/372 (17%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3690

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3691 GAGGRLGVGGTESVSA--PTLLES-IQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 3747

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR V+SL+G   V  A G  H+A V             S+G L+TWG
Sbjct: 3748 GKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVT------------SAGDLYTWG 3795

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 3796 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 3855

Query: 488  LGDPKANG---------------------------------------------KLPTRVE 502
            LG   ++G                                             + P +V+
Sbjct: 3856 LGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQ 3915

Query: 503  GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQV 562
            G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV AL+ ++V
Sbjct: 3916 GLQGKKVIA-IATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGRKV 3974

Query: 563  KSIVCGTSFTAA 574
              + CG++ T A
Sbjct: 3975 NRVACGSAHTLA 3986



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 136/300 (45%), Gaps = 27/300 (9%)

Query: 224  PKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
            P  +ES   + ++ +A   GG+H   ++ +GEV+SWGE   G+LGHG  S    P+++++
Sbjct: 3707 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES 3766

Query: 282  LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            L+   V  +A G  H+  VT +GD+YTWG     +G LGH +      PK +   L+G  
Sbjct: 3767 LRGTEVVDIAAGGAHSACVTSAGDLYTWGKG--RYGRLGHSDSEDQLKPKLVEA-LQGHR 3823

Query: 342  VSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
            V  V+CG     T  +T    ++++GDG +G LG G       P +V             
Sbjct: 3824 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVP------------ 3871

Query: 400  GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
                    + + VG  S+   S  +L   G GD  RLGHG  +    P  V  L      
Sbjct: 3872 --------LSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3923

Query: 460  QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
             ++ G    V  T  G VYT G    GQLGD   N     R+   L    V  +ACG  H
Sbjct: 3924 AIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGSAH 3983



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 159/332 (47%), Gaps = 32/332 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+    AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ +++L+G + +  A G  H  A+ E              ++ +WG+ D+ +      
Sbjct: 700 YPKLLEALQGKKVIDVAAGSTHCLALTE------------DSEVHSWGNNDQCQHFDTLH 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
           + +  P+ +  L   +   ++CG + + A ++
Sbjct: 748 QTKPEPSLLPGLDTKHIVGIACGPAQSFAWSS 779



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH   ++ D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 2778 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 2835

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V+  +   V  +ACG R A  +  T +G VFSWG+   
Sbjct: 2836 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2886

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG
Sbjct: 2887 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 2944

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
            +++ +  P+ + G L G  +  V+ G  H   VT AGQ++ +GD   G  G+G       
Sbjct: 2945 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3003

Query: 383  PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            P  V  L+G +  R ACG  H+ A   V + + S
Sbjct: 3004 PTLVQGLEGQKITRVACGSSHSVAWTTVDMATPS 3037



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  V AL      +V+  
Sbjct: 2698 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVH 2757

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 2758 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 2816

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 2817 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 2876

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC +P N +R
Sbjct: 2877 LVFSWGDGDFGKLGRGGSEGCNVPQNIER 2905



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3630 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3680

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3681 ---ADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 3737

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V +IA G  H A +TS  ++YTWGKG
Sbjct: 3738 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKG 3797

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  + CG+     +CL        W  G    + 
Sbjct: 3798 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3857

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 3858 RGGSDGCKVPMKV 3870


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/397 (34%), Positives = 199/397 (50%), Gaps = 41/397 (10%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3984 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4030

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 4031 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4090

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 4091 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4147

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRA---------ACGVWHTAAVVEVMVGSSSSS 418
             +G LG G+  +   P  V +L+G +  +A         ACG+ HT AV           
Sbjct: 4148 DYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAV----------- 4196

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
            +     ++ +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  G VY
Sbjct: 4197 SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVY 4256

Query: 479  TMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
            T G      L + +A N   P +V   L    +E++A G  H   LTS  ++Y WG  + 
Sbjct: 4257 TFGQDRLIGLPEGRARNHNRPQQVP-VLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSE 4315

Query: 538  GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G+LG G T+    P+LV  L+ K V+ I  G   +AA
Sbjct: 4316 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4352



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   +++LT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ +  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQVSAGTSHSLA 732



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 151/299 (50%), Gaps = 28/299 (9%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 4073 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4132

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH---------VSSVSCG 348
              VT  G ++T+G  N ++G LG GN  +  LP+++   LEG           + SV+CG
Sbjct: 4133 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQARNKSIICSVACG 4189

Query: 349  PWHTAVVTSAGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
              HT  V++ G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+
Sbjct: 4190 LNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4249

Query: 408  VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
             +             G+++T+G      L  G       P  V  L       V+ G   
Sbjct: 4250 TK------------DGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEH 4297

Query: 468  TVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            T+ALT+TG +Y  GS   GQLG    N  + PT V     KN V +I+ G  H A  T+
Sbjct: 4298 TLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN-VRQISAGRCHSAAWTA 4355



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 162/339 (47%), Gaps = 37/339 (10%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3984 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 4037

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 4038 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4094

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 4095 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 4142

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALV---------EPNFCQVSCGHSLTVALTTTG-H 476
            T+G+GD GRLG G+   + +P  V AL          +   C V+CG + T+A++  G  
Sbjct: 4143 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSM 4202

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            V+  G   YG+LG   +  K   +    L    ++++ACG      LT   +VYT+G+  
Sbjct: 4203 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDR 4262

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               L  G   + N P  V  L    ++ +  G   T A+
Sbjct: 4263 LIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 4301



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 152/302 (50%), Gaps = 32/302 (10%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCS 590
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + ++     V       C 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACL 644

Query: 591 GC 592
           GC
Sbjct: 645 GC 646



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 13/187 (6%)

Query: 172  SAVSSSSQGSGHDDGDSLGDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESA 230
            S + S + G  H    S     +W    GD G LG G   + S          P+ V+  
Sbjct: 4181 SIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS---------PQKVDVL 4231

Query: 231  VVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV 290
              + ++ +ACG + +  +TK G+V+++G++    L  G   + + P+ +  L  + +E V
Sbjct: 4232 CGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDV 4291

Query: 291  ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
            A G  HT A+T +GD+Y WG ++     LGH N +       L   L+G +V  +S G  
Sbjct: 4292 AVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVR---EPTLVTVLQGKNVRQISAGRC 4348

Query: 351  HTAVVTS 357
            H+A  T+
Sbjct: 4349 HSAAWTA 4355



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  VS G  H+   T+
Sbjct: 718 IAIQQVSAGTSHSLAWTA 735


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/419 (32%), Positives = 214/419 (51%), Gaps = 41/419 (9%)

Query: 171  SSAVSSSSQGSGHDDGDSLGD----VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKA 226
            ++A  + S  S + D  SL +    V +WG    D    GG+  S     VK+ ++    
Sbjct: 2869 TAAEPTYSTSSNYADDQSLNEISSKVLVWG--LNDKEQLGGLKGSK----VKLPTY---- 2918

Query: 227  VESAVVLDVQ--NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN 284
              S+V+  ++  +IA G +   +V++ G++++ GE   GRLG G +++V  P+ +  L  
Sbjct: 2919 --SSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQ 2976

Query: 285  INVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
              V+ VA   G  H  A+TL G +++WG G +   G LGHGN ++L  PK +   L    
Sbjct: 2977 YVVKKVAVHSGGKHAMALTLDGKVFSWGEGED---GKLGHGNRLTLEKPKLIES-LRTKR 3032

Query: 342  VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
            V  ++CG  H+A +TS+G+L+T+G G +G LGHGD  +   P+ V +L+G R V+ ACG 
Sbjct: 3033 VRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACG- 3091

Query: 402  WHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
                          + + C    G +F+WGDGD G+LG G  E   VP  V  L      
Sbjct: 3092 -----------SRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGVM 3140

Query: 460  QVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDY 518
            Q+ CG   ++ALT +G V+T G   Y +LG     + + PT ++G   K  +  +A G  
Sbjct: 3141 QIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVI-HVAVGAL 3199

Query: 519  HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            H   +T   +VY WG   +G+ G G+T     P+LV  L    V  + CG+S + A  L
Sbjct: 3200 HCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWSL 3258



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 198/399 (49%), Gaps = 26/399 (6%)

Query: 193  FIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            F WG  +   I G G +  G   G+      +P   E+  +L    IA G +    VT  
Sbjct: 3931 FSWGGAST--IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPD 3988

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ G   GGRLG G    VS P L+++L+++ ++ VA   G  H  A++  G++++W
Sbjct: 3989 GKLYATGYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSW 4048

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN  S   PK +   L GI V  ++CG  H+A +TS G + T+G G 
Sbjct: 4049 GEGED---GKLGHGNRDSYDRPKLIEA-LSGIGVIDIACGSAHSACITSQGHVLTWGKGR 4104

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLF 426
            +G LGHGD      P+ V++L G R +  ACG               + + C      ++
Sbjct: 4105 YGRLGHGDSEDQLQPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVW 4152

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            +WGDGD G+LG G  +   +P  + +L      +V CG   +VALT +G VYT G   Y 
Sbjct: 4153 SWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYH 4212

Query: 487  QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            +LG    +  + P +V     K  +  IA G  H    +   EV+TWG    G+LG G  
Sbjct: 4213 RLGHGNTDHVRRPKKVAALQGKKII-SIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTV 4271

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGV 584
                 P LV++L+ K +  ++CG++ T A+  ++    V
Sbjct: 4272 TAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAV 4310



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/288 (35%), Positives = 151/288 (52%), Gaps = 31/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WGE   DG LG G            DS+  PK +E+   + V +IACG  H+A +
Sbjct: 4043 GEVFSWGEGE-DGKLGHG----------NRDSYDRPKLIEALSGIGVIDIACGSAHSACI 4091

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDM 306
            T QG V +WG+   GRLGHG   D   PKL++AL       +AC  G+  T  +T   ++
Sbjct: 4092 TSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNV 4151

Query: 307  YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            ++WG  + ++G LG G      +P K+   L G+ V  V CG   +  +T +G ++T+G 
Sbjct: 4152 WSWG--DGDYGKLGRGGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGSVYTWGK 4208

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKL 425
            G +  LGHG+   V  P++V +L+G + +  A G  H  A             CS SG++
Sbjct: 4209 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEV 4255

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            FTWGD D G+LG G   A   P  V +L   +  +V CG + T+AL+T
Sbjct: 4256 FTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALST 4303



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 156/322 (48%), Gaps = 40/322 (12%)

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I+    + V  VAC E++   +T  G +++            H N      PK   G LE
Sbjct: 517 IELPSTLQVRQVACTENNIYILTTGGQVFSL-----------HSNSSENIAPKAFEG-LE 564

Query: 339 GIHVSSVS--CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
           G+HV  ++  C   H  V++SA +++++G G  G LGHGD +S   P  +  L   +   
Sbjct: 565 GVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCG 624

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
             CG  ++AA+              +G+LFTWG G  GRLGHG+ + +LVPT V AL   
Sbjct: 625 IYCGASYSAAIT------------IAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSY 672

Query: 457 NFCQVSCG----HSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVE 511
               V+ G    HS+ V  T  G ++  G   +G+LG+   NG  +P +++  +    V 
Sbjct: 673 KVVDVALGSGDAHSMCV--TDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVN---VS 727

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            I  G      L+    +YTWGKG  GRLGHG+++  N P LV AL+ K++  +  G++ 
Sbjct: 728 RIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAH 787

Query: 572 TAAIC----LHKWVSGVDQSMC 589
             A+     L+ W     Q +C
Sbjct: 788 CLALTSSGELYGWGRNDYQQIC 809



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 136/274 (49%), Gaps = 23/274 (8%)

Query: 220 DSFVPKAVESAVVLDVQNIA--CGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           ++  PKA E    + V  IA  C G+H  +++   EV+SWG   GGRLGHG      HP 
Sbjct: 553 ENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPT 612

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL 337
           +I  L    V  + CG  ++ A+T++G+++TWG     +G LGHGN     +P ++   L
Sbjct: 613 MIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRG--TYGRLGHGNSDDKLVPTQVQA-L 669

Query: 338 EGIHVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
           +   V  V+ G    H+  VT  G LF +GDG FG LG+G       P ++D+L      
Sbjct: 670 KSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTL------ 723

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
                      V  +  GS  S   S  G L+TWG G  GRLGHG+ E   VP  V AL 
Sbjct: 724 ---------VNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALE 774

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
                 V+ G +  +ALT++G +Y  G   Y Q+
Sbjct: 775 GKKIADVAVGSAHCLALTSSGELYGWGRNDYQQI 808



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 188/408 (46%), Gaps = 49/408 (12%)

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
           +E    L V+ +AC   +  ++T  G+VFS          H   S+   PK  + L+ ++
Sbjct: 517 IELPSTLQVRQVACTENNIYILTTGGQVFSL---------HSNSSENIAPKAFEGLEGVH 567

Query: 287 VELVA--CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 344
           V  +A  C   H   ++ + ++++WG  +   G LGHG+ +S   P  + G L    V  
Sbjct: 568 VVQIAAHCEGKHVMVLSSANEVWSWGAGDG--GRLGHGDTVSKEHPTMIVG-LHEKQVCG 624

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
           + CG  ++A +T AG+LFT+G GT+G LGHG+      P +V +LK  +           
Sbjct: 625 IYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYK----------- 673

Query: 405 AAVVEVMVGSSSS-SNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
             VV+V +GS  + S C   +G LF WGDGD G+LG+G      +P  +  LV  N  ++
Sbjct: 674 --VVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLV--NVSRI 729

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG----KLPTRVEGKLTKNFVEEIACGD 517
             G   +VAL+  G +YT G    G+LG   +      KL   +EGK     + ++A G 
Sbjct: 730 YSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKK----IADVAVGS 785

Query: 518 YHVAVLTSRTEVYTWGKGANGRL-GHGDTDDRNFPS-LVEALKDKQVKSIVCGTSFTAAI 575
            H   LTS  E+Y WG+    ++   G + D    S ++      ++  + CG + +   
Sbjct: 786 AHCLALTSSGELYGWGRNDYQQICPSGVSRDPIIHSPILTTPPTLRISGMTCGAAQSIVW 845

Query: 576 CLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVK 623
           C H    GV        +IPF      H       + C  C+S   V+
Sbjct: 846 C-HSSTLGV------ASKIPFVVDLSEHTFRMLDQLLCMVCNSPGDVR 886



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 91/191 (47%), Gaps = 14/191 (7%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GKL+  G+G  GRLG G       P  V  L +    +V+   G    +ALT  G V++ 
Sbjct: 2944 GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSW 3003

Query: 481  GSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            G    G+LG   +   + P  +E   TK  V +IACG  H A +TS  E+YTWG G  GR
Sbjct: 3004 GEGEDGKLGHGNRLTLEKPKLIESLRTKR-VRDIACGSSHSAAITSSGELYTWGLGEYGR 3062

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VDQSMC 589
            LGHGD   +  P LV  L+  +V  + CG+     +CL +      W  G    + +   
Sbjct: 3063 LGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGS 3122

Query: 590  SGCRIPFNFKR 600
             GC +P   +R
Sbjct: 3123 EGCSVPHQVER 3133



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 120/256 (46%), Gaps = 28/256 (10%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  +F +G    G LG   G RI + TP E  SL  LR ++ A G     AV        
Sbjct: 3936 ASTIFGWGHNHRGQLGGLDGSRIKMPTPCEALSL--LRPIQIAGGEQTLYAVT------- 3986

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKL+  G G  GRLG G  ++   PT V +L  V      V+ G    +AL++
Sbjct: 3987 -----PDGKLYATGYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSS 4041

Query: 474  TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
             G V++ G    G+LG    +     ++   L+   V +IACG  H A +TS+  V TWG
Sbjct: 4042 DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWG 4101

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG------ 583
            KG  GRLGHGD++D+  P LVEAL   +   I CG+     +C+    + W  G      
Sbjct: 4102 KGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGK 4161

Query: 584  VDQSMCSGCRIPFNFK 599
            + +    GC+IP   +
Sbjct: 4162 LGRGGSDGCKIPMKIE 4177


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/340 (36%), Positives = 180/340 (52%), Gaps = 19/340 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQG-EVFSWGEELGGRLGHGVDSDVSHPKL 278
           D   P  + +    D+  + CG  H    ++ G +V+SWG    GRLGHG  SD+  P  
Sbjct: 53  DRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHP 112

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL+ + ++ +ACG+ H  AVT+   + +WG  N N G LG G      LP+K+    E
Sbjct: 113 IKALQGLMIQQIACGDSHCLAVTMDSQVLSWG-RNQN-GELGLGTAEDSLLPQKIQ-IFE 169

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
            I +  V+ G  H+  +T  G L+ +G G +G LG GDR     P +V ++ G +    A
Sbjct: 170 EIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKV-TVDGDKMAMVA 228

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT  V             SSG L+T G G  G+LGHGD E  LVP  V AL +   
Sbjct: 229 CGWRHTICV------------SSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQALSDKFI 276

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            QVS G   ++ALT++G +   G   +GQ+G     +   P +V     +  V+ I+CG 
Sbjct: 277 SQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQK-VQMISCGW 335

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   +T R  VY+WG+GANG+LG+G+T DRN P+++EA 
Sbjct: 336 RHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIEAF 375



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 170/365 (46%), Gaps = 21/365 (5%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++ G  H+  +     V SWG    G+LGHG   D   P  + AL   ++  V CG  HT
Sbjct: 19  VSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHT 78

Query: 298 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + SG D+Y+WG  +  FG LGHG+   L +P  +   L+G+ +  ++CG  H   VT
Sbjct: 79  MARSESGRDVYSWGWGD--FGRLGHGDHSDLLIPHPIKA-LQGLMIQQIACGDSHCLAVT 135

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
              Q+ ++G    G LG G       P+++   + +     A G  H+ A+ +       
Sbjct: 136 MDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITK------- 188

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 G L+ WG G  G LG GD+  RL+P  V    +     V+CG   T+ ++++G 
Sbjct: 189 -----DGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGD-KMAMVACGWRHTICVSSSGG 242

Query: 477 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           +YT G   YGQLG       L  R    L+  F+ +++ G  H   LTS  ++  WG   
Sbjct: 243 LYTNGWGKYGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNK 302

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSGC 592
            G++G G+  D   P  V    D++V+ I CG   T A+     ++ W  G +  + +G 
Sbjct: 303 FGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGE 362

Query: 593 RIPFN 597
            I  N
Sbjct: 363 TIDRN 367



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 133/405 (32%), Positives = 192/405 (47%), Gaps = 54/405 (13%)

Query: 120 LSDAVL--YAAPPK-VLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDT---- 165
           + D V+   AAPP+ VLL S  A  SV  LS         G DG+ GH     GDT    
Sbjct: 1   MEDEVMSEVAAPPRRVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGH-----GDTDDRL 55

Query: 166 FRVSLSSA----VSSSSQGSGHD--DGDSLGDVFIWGECTGD-GILGGGIHRSGSYAGVK 218
           F   LS+     +   + G+ H     +S  DV+ WG   GD G LG G H         
Sbjct: 56  FPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWG--WGDFGRLGHGDHS-------- 105

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
            D  +P  +++   L +Q IACG  H   VT   +V SWG    G LG G   D   P+ 
Sbjct: 106 -DLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQK 164

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I   + I +++VA G  H+ A+T  G++Y WG     +G LG G+     LP+K+   ++
Sbjct: 165 IQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWG--RYGNLGLGDRNDRLLPEKVT--VD 220

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  ++ V+CG  HT  V+S+G L+T G G +G LGHGD      PR+V +L      + +
Sbjct: 221 GDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQALSDKFISQVS 280

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            G  H+ A+             SSG+L  WG    G++G G+      P  V    +   
Sbjct: 281 GGWRHSMALT------------SSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQKV 328

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVE 502
             +SCG   T+A+T   +VY+ G    GQLG+ +  +  +PT +E
Sbjct: 329 QMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIE 373


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 174/337 (51%), Gaps = 33/337 (9%)

Query: 238 IACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           + CG  H  A   ++ +++SWG    GRLGHG  SDV +P+ I AL+ + +  +ACG+ H
Sbjct: 81  VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSH 140

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
             AVT++G +++WG  N N G LG GN     LP+K+    EG+ V  ++ G  HTA VT
Sbjct: 141 CLAVTVAGHVHSWG-RNQN-GQLGLGNTEDSLLPQKIQ-AFEGVRVKMIAAGAEHTAAVT 197

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G L+ +G G +G LG GDR     P +V S+ G + V  ACG  HT  V         
Sbjct: 198 EDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV--------- 248

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ---------------V 461
               SSG ++T+G    G+LGHGD E  LVP  + AL +    Q                
Sbjct: 249 ---SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGF 305

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
             G  +  AL   G +Y  G   +GQ+G     +   P +V     +  V+ +ACG  H 
Sbjct: 306 RVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQ-VACGWRHT 364

Query: 521 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
             LT    V++WG+G +G+LGHG+  DRN P +++AL
Sbjct: 365 LALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDAL 401



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 138/281 (49%), Gaps = 22/281 (7%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D F P+ +++   + +  IACG  H   VT  G V SWG    G+LG G   D   P+ I
Sbjct: 116 DVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKI 175

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            A + + V+++A G  HT AVT  GD+Y WG     +G LG G+     +P+K++  + G
Sbjct: 176 QAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWG--RYGNLGLGDRDDRLIPEKVS-SVNG 232

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
             +  V+CG  HT  V+S+G ++T+G   +G LGHGD      P ++++LK     +   
Sbjct: 233 QKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEA 292

Query: 400 GVWHTAAVVEVMV-----------GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
                   VE++            G    +  + GKL+ WG    G++G GD E    P 
Sbjct: 293 --------VELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPV 344

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            V    E    QV+CG   T+ALT   +V++ G    GQLG
Sbjct: 345 QVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLG 385



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 113/234 (48%), Gaps = 17/234 (7%)

Query: 406 AVVEVMVGSSSS-SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS-- 462
           +VV +  G+S S +  S G + +WG G+ G+LGHGD E R VPT + A  +     V+  
Sbjct: 21  SVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASV 80

Query: 463 --CGHSLTVALTTTG-HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
             CG   T A +     +Y+ G   +G+LG   ++     +    L    + +IACGD H
Sbjct: 81  VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSH 140

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC--- 576
              +T    V++WG+  NG+LG G+T+D   P  ++A +  +VK I  G   TAA+    
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDG 200

Query: 577 -LHKWVSGVDQSMCSGCR----IP---FNFKRKRHNCYNCGLVYCHTCSSKKSV 622
            L+ W  G   ++  G R    IP    +   ++     CG  +  T SS  S+
Sbjct: 201 DLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSI 254


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/339 (34%), Positives = 173/339 (51%), Gaps = 31/339 (9%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G V+SWG    G+LG G  +D   P L+DALK+  V  VACG  HT  ++  G +YTWG 
Sbjct: 7   GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWG- 65

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
              + G LGHG+    ++P+ +   LEG  +   +CG +HTA VT  G+L+T+G G +G 
Sbjct: 66  -RGDDGRLGHGDNGWKYVPRIVE-ALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 372 LGHGDRISVSTPREVDSLK--GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           LGHG+     TP  V  L+  G R  + ACG  HT  + ++            GK++TWG
Sbjct: 124 LGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDL------------GKVYTWG 171

Query: 430 DGDRGRLGHGDKEA-RLVPTCVAALVEPNFCQVS-CGHSLTVALTTTGHVYTMGSPVYGQ 487
           D + G +GH + +  + +P  + +L      QV+ CG   T ALT  G ++T G   +G+
Sbjct: 172 DKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFH-TAALTAAGEIFTWGEGKFGR 230

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG-----------KGA 536
           LG      ++  R+   L    V  +ACG +H A +    E+YTWG            G 
Sbjct: 231 LGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGD 290

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +G+LGHGD    + P+LV  L    V  +      TAA+
Sbjct: 291 HGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAAL 329



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/291 (37%), Positives = 153/291 (52%), Gaps = 26/291 (8%)

Query: 302 LSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           ++G +Y+WG G +   GL G  N+        L   L+   V  V+CG  HT V++  G 
Sbjct: 5   VAGLVYSWGRGEDGQLGL-GDTNDQD---RPVLVDALKSKGVVQVACGSGHTVVLSEDGA 60

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           ++T+G G  G LGHGD      PR V++L+G R V+A CG +HTAAV +           
Sbjct: 61  VYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTD----------- 109

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE--PNFCQVSCGHSLTVALTTTGHVY 478
             G+L+TWG G  G+LGHG++     P  V  L +      Q++CG   TV LT  G VY
Sbjct: 110 -KGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVY 168

Query: 479 TMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           T G    G +G   A+G   LP  +E    K   +  ACG +H A LT+  E++TWG+G 
Sbjct: 169 TWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACG-FHTAALTAAGEIFTWGEGK 227

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
            GRLGHG   ++  P +VEAL  K+V  + CG   +AAI     L+ W  G
Sbjct: 228 FGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGG 278



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 108/196 (55%), Gaps = 19/196 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLIDALKNINVELVACG 293
           V  IACG RH  ++T  G+V++WG++  G +GH   D     P+++++L+   V  VA  
Sbjct: 148 VTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAAC 207

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
             HT A+T +G+++TWG     FG LGHG E +  +P+ +   L G  V  V+CG +H+A
Sbjct: 208 GFHTAALTAAGEIFTWG--EGKFGRLGHGMERNQMVPRMVE-ALMGKRVGHVACGGFHSA 264

Query: 354 VVTSAG-----------QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
            +  +G           Q++TFG+G  G LGHGD   VS P  V  L  +  V+ A    
Sbjct: 265 AILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNE 324

Query: 403 HTAAVVEVMVGSSSSS 418
           HTAA    + G+SSS+
Sbjct: 325 HTAA----LAGASSST 336



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 19/179 (10%)

Query: 189 LGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           LG V+ WG+   +G++G        +       ++P+ +ES     V  +A  G H A +
Sbjct: 164 LGKVYTWGD-KENGVVG--------HTNADGHQYLPRMLESLQAKTVTQVAACGFHTAAL 214

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           T  GE+F+WGE   GRLGHG++ +   P++++AL    V  VACG  H+ A+  SG++YT
Sbjct: 215 TAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYT 274

Query: 309 WGG---------SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
           WGG          N + G LGHG+   + +P  + G ++ +HV  V+    HTA +  A
Sbjct: 275 WGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVK-MHVVKVASYNEHTAALAGA 332


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/388 (32%), Positives = 198/388 (51%), Gaps = 30/388 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E    L VQ IA G +    V+  
Sbjct: 2423 VFVWGLNDKDQL--------GGLKGSKIK--VPVLSEFIGALKVQQIAGGSKTLFAVSHD 2472

Query: 252  GEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+VF+ GE   GRLG G + ++V+ P+ I+ L +  V  V+   G  H  A+T+ G +++
Sbjct: 2473 GKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFS 2532

Query: 309  WG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG G +   G LGHGN M+   PK ++   +   V  +SCG  H+A + S+G+L+T+G G
Sbjct: 2533 WGEGED---GKLGHGNRMNCDHPKLID-TFKSSCVRDMSCGSSHSAAILSSGELYTWGLG 2588

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LGHGD  +   P++V S    R +  ACG             + + +    G +++
Sbjct: 2589 EYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACG----------SRDAQTLALTDDGTVWS 2638

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGDGD G+LG G  E   VP  V  L     C+V+CG   ++AL+T+G V+T G   Y +
Sbjct: 2639 WGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYR 2698

Query: 488  LGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG     + + P  V+G   K  V+ +A G  H   +T   +V+ WG   +G+ G+  T 
Sbjct: 2699 LGHGNDTHVRKPQIVDGLRGKKIVD-VAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTT 2757

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P LV  L+ +++  + CG+S + A
Sbjct: 2758 VNRRPQLVNGLEGQKITRVACGSSHSIA 2785



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 132/387 (34%), Positives = 198/387 (51%), Gaps = 26/387 (6%)

Query: 195  WGECTGDGILGGGIH----RSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            WG   G G + G  H    + GS  G K+   +P+ +E+   +    I  G +    VT 
Sbjct: 3350 WG---GSGTIYGWGHNHRGQLGSLEGAKVK--LPQTIEALASIRPVQIVGGEQTLFAVTA 3404

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            +G+V++ G   GGRLG G    V+  K++++L+++ V  VA   G  H  A++  GD+Y+
Sbjct: 3405 EGKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYS 3464

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG    + G LGHGN  S   P+ +   L G  V  +SCG  H+A +T   +L+T+G G 
Sbjct: 3465 WG--EGDDGKLGHGNRNSCDRPRVIEA-LRGKGVIDISCGGSHSACITQNHELYTWGKGR 3521

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD      P+ V++L+G R +  ACG      +        +  +C    +++W
Sbjct: 3522 YGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLC------LTDDDC----VWSW 3571

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  +   +P  V +L+     +V CG   +VALT +G VYT G   Y +L
Sbjct: 3572 GDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRL 3631

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            G     + + P RV     K  +  IA G  H    T   EVYTWG    G+LG G T+ 
Sbjct: 3632 GHGVDDHVRRPKRVAALQGKKVIT-IATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNA 3690

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P LV AL+ K++  + CG++ T A
Sbjct: 3691 IARPRLVTALQGKKISRVACGSAHTIA 3717



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 165/335 (49%), Gaps = 30/335 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G VF  GE T +G LG G         +  +  VP+ +E+     V+ ++   GGRHA  
Sbjct: 2473 GKVFACGEST-NGRLGLG--------PLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMA 2523

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T +G++FSWGE   G+LGHG   +  HPKLID  K+  V  ++CG  H+ A+  SG++Y
Sbjct: 2524 LTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELY 2583

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PKK+        V  ++CG     T  +T  G ++++G
Sbjct: 2584 TWGLG--EYGRLGHGDNYTHLKPKKVQS-FTSHRVIDIACGSRDAQTLALTDDGTVWSWG 2640

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     S P  V+ L+G    + ACG   + A+             +SG +
Sbjct: 2641 DGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLAL------------STSGLV 2688

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG+      P  V  L       V+ G    +A+T +G V+  G   +
Sbjct: 2689 WTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDH 2748

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYH 519
            GQ G+      + P  V G L    +  +ACG  H
Sbjct: 2749 GQQGNNTTTVNRRPQLVNG-LEGQKITRVACGSSH 2782



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 141/278 (50%), Gaps = 19/278 (6%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G+H   +T++GEV+SWG   GG+LGHG  S    P L+  L    V  ++CG  H+ AVT
Sbjct: 26  GKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVT 85

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAG 359
             G++YTWG    N+G LGHG+     +P  ++G L G H+  V+CG    HT      G
Sbjct: 86  SEGELYTWG--RGNYGRLGHGSSEDQLVPVLVSG-LRGHHIIDVACGSGDAHTLAAADDG 142

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            ++++GDG +G LG G       P+ ++ L+GL   +  CG   + A+            
Sbjct: 143 TVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTR---------- 192

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
              G ++TWG G+  RLGHG ++    P  V AL   +   VS G    +ALT  G VY 
Sbjct: 193 --DGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYC 250

Query: 480 MGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACG 516
            G    GQLGD     +  PT V G  +K  V  IACG
Sbjct: 251 WGRNDQGQLGDIDCQIRPEPTLVSGLASKGIV-GIACG 287



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 144/284 (50%), Gaps = 23/284 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            GDV+ WGE   DG LG G   S            P+ +E+     V +I+CGG H+A +T
Sbjct: 3460 GDVYSWGE-GDDGKLGHGNRNSCDR---------PRVIEALRGKGVIDISCGGSHSACIT 3509

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +  E+++WG+   GRLGHG   D   PK+++AL+   V  VACG      + L+ D   W
Sbjct: 3510 QNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVW 3569

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
               + ++G LG G      +P K+   L G+ VS V CG   +  +T +G ++T+G G +
Sbjct: 3570 SWGDGDYGKLGRGGSDGCKIPMKVES-LIGLGVSKVECGSQFSVALTRSGAVYTWGKGDY 3628

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
              LGHG    V  P+ V +L+G + +  A G  H  A            +  +G+++TWG
Sbjct: 3629 YRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVA------------STDTGEVYTWG 3676

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            D D G+LG G   A   P  V AL      +V+CG + T+A +T
Sbjct: 3677 DNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAWST 3720



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 143/301 (47%), Gaps = 26/301 (8%)

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           H  A+T  G++Y+WG  +   G LGHG+      P  + G L G  V  +SCG  H+A V
Sbjct: 28  HFLALTREGEVYSWGSGDG--GKLGHGDTSPREEPTLVTG-LAGKQVIRISCGSTHSAAV 84

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVG 413
           TS G+L+T+G G +G LGHG       P  V  L+G   +  ACG    HT A  +    
Sbjct: 85  TSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAAD---- 140

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                    G +++WGDGD G+LG G  +    P  +  L     C+V CG   ++ALT 
Sbjct: 141 --------DGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTR 192

Query: 474 TGHVYTMGSPVYGQLG----DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
            G V+T G     +LG    D   + KL   ++GK     V +++ G  H   LT   EV
Sbjct: 193 DGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGK----HVVDVSVGSIHCLALTDAGEV 248

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI-CLHKWVSGVDQSM 588
           Y WG+   G+LG  D   R  P+LV  L  K +  I CG + + A  C  +W  G     
Sbjct: 249 YCWGRNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWSCAGQWSVGTRLQF 308

Query: 589 C 589
           C
Sbjct: 309 C 309



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 166/331 (50%), Gaps = 22/331 (6%)

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            Q +VF WG     +LG    S +  P L + +  + V+ +A G     AV+  G ++  G
Sbjct: 2420 QIKVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACG 2479

Query: 311  GSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDG 367
             S    G LG G    ++ +P+++   L    V  VS   G  H   +T  G+LF++G+G
Sbjct: 2480 ESTN--GRLGLGPLSANVTVPRQIEN-LSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEG 2536

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
              G LGHG+R++   P+ +D+ K       +CG  H+AA++            SSG+L+T
Sbjct: 2537 EDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAIL------------SSGELYT 2584

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVY 485
            WG G+ GRLGHGD    L P  V +        ++CG   + T+ALT  G V++ G   +
Sbjct: 2585 WGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDF 2644

Query: 486  GQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            G+LG   + G  +P  VE KL    V ++ACG      L++   V+TWGKG   RLGHG+
Sbjct: 2645 GKLGRGGSEGCSVPNPVE-KLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGN 2703

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                  P +V+ L+ K++  +  G     A+
Sbjct: 2704 DTHVRKPQIVDGLRGKKIVDVAVGALHCLAV 2734



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 123/244 (50%), Gaps = 17/244 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
           V  I+CG  H+A VT +GE+++WG    GRLGHG   D   P L+  L+  ++  VAC  
Sbjct: 71  VIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGS 130

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+ HT A    G +++WG  + ++G LG G       PK +   L+G+ V  V CG   +
Sbjct: 131 GDAHTLAAADDGTVWSWG--DGDYGKLGRGGSDGCKNPKSIER-LQGLGVCKVYCGAQFS 187

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  G ++T+G G    LGHG    V  P+ V++L G   V  + G  H  A+ +   
Sbjct: 188 LALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTD--- 244

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                    +G+++ WG  D+G+LG  D + R  PT V+ L       ++CG + + A +
Sbjct: 245 ---------AGEVYCWGRNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWS 295

Query: 473 TTGH 476
             G 
Sbjct: 296 CAGQ 299



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 135/270 (50%), Gaps = 27/270 (10%)

Query: 150  GSDGRTGHLKGLSGD------TFRVSLSSAVSSSSQGSGHDDGD-SLGDVFIWGECTGD- 201
            G DG+ GH   ++ D      TF+   SS V   S GS H     S G+++ WG   G+ 
Sbjct: 2536 GEDGKLGHGNRMNCDHPKLIDTFK---SSCVRDMSCGSSHSAAILSSGELYTWG--LGEY 2590

Query: 202  GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGE 259
            G LG G     +Y  +K     PK V+S     V +IACG R A  +  T  G V+SWG+
Sbjct: 2591 GRLGHG----DNYTHLK-----PKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGD 2641

Query: 260  ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLL 319
               G+LG G     S P  ++ L+   V  VACG   + A++ SG ++TWG  +  +  L
Sbjct: 2642 GDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGD--YYRL 2699

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN+  +  P+ ++G L G  +  V+ G  H   VT +GQ+F +GD   G  G+     
Sbjct: 2700 GHGNDTHVRKPQIVDG-LRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTV 2758

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
               P+ V+ L+G +  R ACG  H+ A  E
Sbjct: 2759 NRRPQLVNGLEGQKITRVACGSSHSIAWAE 2788



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 134/275 (48%), Gaps = 15/275 (5%)

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
            SG +Y WG ++   G LG      + LP+ +   L  I    +  G      VT+ G+++
Sbjct: 3353 SGTIYGWGHNH--RGQLGSLEGAKVKLPQTIEA-LASIRPVQIVGGEQTLFAVTAEGKVY 3409

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
              G G  G LG G   +V++ + ++SL+ +   + A    H+        G  + +  + 
Sbjct: 3410 ATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAV---HSG-------GKHAMALSAD 3459

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
            G +++WG+GD G+LGHG++ +   P  + AL       +SCG S +  +T    +YT G 
Sbjct: 3460 GDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGK 3519

Query: 483  PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANGRL 540
              YG+LG   +  +L  +V   L  N V ++ACG  D     LT    V++WG G  G+L
Sbjct: 3520 GRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKL 3579

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G G +D    P  VE+L    V  + CG+ F+ A+
Sbjct: 3580 GRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVAL 3614



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 74/149 (49%), Gaps = 10/149 (6%)

Query: 461  VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
            V  G    +AL+  G VY+ G    G+LG    N     RV   L    V +I+CG  H 
Sbjct: 3446 VHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHS 3505

Query: 521  AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK- 579
            A +T   E+YTWGKG  GRLGHGD++D+  P +VEAL+  +V  + CG+     +CL   
Sbjct: 3506 ACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDD 3565

Query: 580  -----WVSG----VDQSMCSGCRIPFNFK 599
                 W  G    + +    GC+IP   +
Sbjct: 3566 DCVWSWGDGDYGKLGRGGSDGCKIPMKVE 3594



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 107/219 (48%), Gaps = 23/219 (10%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSAVSSS---SQGSGHDDGDSL-----GDVFIWGECTGD 201
           G+ GR GH  G S D     L S +          G  D  +L     G V+ WG+  GD
Sbjct: 96  GNYGRLGH--GSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGD--GD 151

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
               G + R GS  G K     PK++E    L V  + CG + +  +T+ G V++WG+  
Sbjct: 152 Y---GKLGRGGS-DGCKN----PKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGE 203

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           G RLGHG +  V HPKL++AL   +V  V+ G  H  A+T +G++Y WG +  + G LG 
Sbjct: 204 GFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRN--DQGQLGD 261

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
            +      P  ++G L    +  ++CGP  +   + AGQ
Sbjct: 262 IDCQIRPEPTLVSG-LASKGIVGIACGPAQSFAWSCAGQ 299



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 5/159 (3%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYT 479
            GK+F  G+   GRLG G   A + VP  +  L      +VS   G    +ALT  G +++
Sbjct: 2473 GKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFS 2532

Query: 480  MGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
             G    G+LG   + N   P  ++     + V +++CG  H A + S  E+YTWG G  G
Sbjct: 2533 WGEGEDGKLGHGNRMNCDHPKLID-TFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYG 2591

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            RLGHGD      P  V++    +V  I CG+     + L
Sbjct: 2592 RLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLAL 2630


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 192/388 (49%), Gaps = 43/388 (11%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DV++WG             R G  A    +  VP A  S      Q + CG     ++  
Sbjct: 3536 DVYLWGA-----------GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 3582

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 3583 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3642

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVTS G+LFTFG+G
Sbjct: 3643 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3699

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G+  +   P            R ACG+ HT AV           +     ++ 
Sbjct: 3700 DYGRLGLGNTSNKKLPE-----------RVACGLNHTLAV-----------SADGSMVWA 3737

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+  A+  P  V  L      +V+CG   +VALT  GHVYT G      
Sbjct: 3738 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 3797

Query: 488  LGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            L + +A N   P +V   L    +E++A G  H   L S  +VY WG  + G+LG G T+
Sbjct: 3798 LPEGRARNHNRPQQVP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 3856

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+ K V+ I  G   +AA
Sbjct: 3857 HVREPTLVTVLQGKNVRQISAGRCHSAA 3884



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 371 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 418

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 479 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 536

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 537 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 583

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 643

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 644 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 702

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 703 PITKPKKVSGLDGIAIQQISAGTSHSLA 730



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 143/290 (49%), Gaps = 30/290 (10%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  ++CG  H+
Sbjct: 3625 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 3684

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              VT  G ++T+G  N ++G LG GN  +  LP++            V+CG  HT  V++
Sbjct: 3685 AVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPER------------VACGLNHTLAVSA 3730

Query: 358  AGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G + + FGDG +G LG G+  + S+P++VD L G+   + ACG   + A+ +       
Sbjct: 3731 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK------- 3783

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                  G ++T+G      L  G       P  V  L       V+ G   T+AL +TG 
Sbjct: 3784 -----DGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGD 3838

Query: 477  VYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            VY  GS   GQLG    N  + PT V     KN V +I+ G  H A  T+
Sbjct: 3839 VYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN-VRQISAGRCHSAAWTA 3887



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 39/330 (11%)

Query: 253  EVFSWGEELGGRL---GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +V+ WG    G+L   G  V    + P    A      + V CG++ T  +  +G +   
Sbjct: 3536 DVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLAC 3589

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGD 366
            G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+  +T +G++F++GD
Sbjct: 3590 GEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3646

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G +G LGHG+      PR++++L+G   V+ +CG  H+A V             S GKLF
Sbjct: 3647 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLF 3694

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG-HVYTMGSPVY 485
            T+G+GD GRLG G+   + +P            +V+CG + T+A++  G  V+  G   Y
Sbjct: 3695 TFGNGDYGRLGLGNTSNKKLPE-----------RVACGLNHTLAVSADGSMVWAFGDGDY 3743

Query: 486  GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G+LG   +  K   +    L    ++++ACG      LT    VYT+G+     L  G  
Sbjct: 3744 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 3803

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + N P  V  L    ++ +  G   T A+
Sbjct: 3804 RNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 3833



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 366 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 420

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 421 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 472

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 473 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 527 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 582

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 583 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 640

Query: 587 SMCSGC 592
             C GC
Sbjct: 641 --CLGC 644



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 601 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 658

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 659 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 715

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 716 IAIQQISAGTSHSLAWTA 733


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 185/366 (50%), Gaps = 26/366 (7%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTK 250
           V  WG  T  G LG G        G++ ++  +P+ + S   ++V +IACG +H   V K
Sbjct: 11  VLCWGSLT-HGQLGLG--------GLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKK 61

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            G V S G    G+LGH  +     P LID+L   NV   + G  H+  +T +G ++TWG
Sbjct: 62  DGRVLSCGNNDYGQLGH--EKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWG 119

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            +  N    G  +  S  +P+ + G L    V  V+CG  HT  +T+ GQ++T+G    G
Sbjct: 120 SNEDNQLGRGQVDSASTSIPRMVRG-LADHKVVQVACGSAHTVGLTATGQIYTWGSNNHG 178

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LG  ++   + P+ V  + GL  VR A G  H   +              SG LF WG 
Sbjct: 179 QLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLT------------ISGALFAWGC 226

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
              G+LG GD + R  PT V  L     C ++CG   ++ALT  G V+T G+ +YGQLG 
Sbjct: 227 NSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGH 286

Query: 491 PKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
             +N +L  R   +L  + V +IACG  H +A + S   VY +G G NG+LG G T +R 
Sbjct: 287 NTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRM 346

Query: 550 FPSLVE 555
            P++V+
Sbjct: 347 SPAMVK 352



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 155/330 (46%), Gaps = 31/330 (9%)

Query: 254 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           V  WG    G+LG G   +  V+ P+ I +  N+ V  +ACG  HT  V   G + + G 
Sbjct: 11  VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCG- 69

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGI---HVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            N ++G LGH        P K    ++ +   +V   S G  H+ V+T AGQ+FT+G   
Sbjct: 70  -NNDYGQLGHEK------PCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNE 122

Query: 369 FGVLGHG--DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
              LG G  D  S S PR V  L   + V+ ACG  HT  +             ++G+++
Sbjct: 123 DNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLT------------ATGQIY 170

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           TWG  + G+LG  +K  +  P  V+ +      +V+ G    + LT +G ++  G   +G
Sbjct: 171 TWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFG 230

Query: 487 QLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           QLG  D +  G  PT V+  L    +  +ACGD H   LT    V+T+G G  G+LGH  
Sbjct: 231 QLGVGDDQDRGA-PTLVK-TLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNT 288

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           +++   P  V  L    V  I CG   + A
Sbjct: 289 SNNELLPRKVFELMGSSVTQIACGRKHSIA 318



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 135/278 (48%), Gaps = 21/278 (7%)

Query: 302 LSGDMYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           L   +  WG  +   G LG G   E ++ LP+++      + V  ++CG  HT  V   G
Sbjct: 7   LKSSVLCWG--SLTHGQLGLGGLEEETVTLPREIRS-FCNVEVVHIACGLQHTLFVKKDG 63

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
           ++ + G+  +G LGH        P  +DSL     ++A+ G  H+  + +          
Sbjct: 64  RVLSCGNNDYGQLGHEK--PCKRPALIDSLGERNVLQASSGTKHSTVLTD---------- 111

Query: 420 CSSGKLFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
             +G++FTWG  +  +LG G  D  +  +P  V  L +    QV+CG + TV LT TG +
Sbjct: 112 --AGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQI 169

Query: 478 YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
           YT GS  +GQLG      +   +    ++   +  +A G  H  VLT    ++ WG  + 
Sbjct: 170 YTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSF 229

Query: 538 GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G+LG GD  DR  P+LV+ L+++ + ++ CG   + A+
Sbjct: 230 GQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLAL 267


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 195/385 (50%), Gaps = 43/385 (11%)

Query: 224 PKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           P+ +ES    +V  +A    G+H   +T +GEV+SWG   GGRLGHG D++V +      
Sbjct: 180 PQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHG-DTNVCY------ 232

Query: 282 LKNINVELVACGEH----HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP---KKLN 334
            K   V ++    H    H  A+T  G++Y+WG  N + G LGHG+  S   P   + L+
Sbjct: 233 -KGQKVLVIVYPYHPEGKHYMALTSEGEVYSWG--NGDGGRLGHGDTNSREEPTLVRGLS 289

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
           G   G HV  + CG  ++A +T+ G+LFT+G G +G LGHG      TP  V SLKG R 
Sbjct: 290 GKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRV 349

Query: 395 VRAACGVW--HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA 452
           +   CG     T AV +             G +++WGDGD G+LG G  +    P  +  
Sbjct: 350 IDICCGSGDAQTLAVTD------------DGTVWSWGDGDYGKLGRGGSDGCKTPKIIDR 397

Query: 453 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVE 511
           L   +  +V CG   ++ALT TGH++T G     +LG   + + + P ++EG   K  V+
Sbjct: 398 LQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVD 457

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            +A G  H  V+T   EVY WG+   G+LG      ++ P+L+  L  K +  I CG + 
Sbjct: 458 -VAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLM-PLDGKSISGIACGPA- 514

Query: 572 TAAICLHKWVSGVDQSMCSGCRIPF 596
             + C   W S    S+  G R+PF
Sbjct: 515 -QSFC---WTSTGHWSV--GLRVPF 533



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 171/343 (49%), Gaps = 33/343 (9%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L V  +AC  R    +TK G V+               S+   P+L+++L +  V  VA 
Sbjct: 147 LGVLQLACAERCLIALTKTGRVYMCF----------YSSESQGPQLMESLADKEVLKVAA 196

Query: 293 ---GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
              G+H+  A+T  G++Y+WG  N + G LGHG+    +  +K+   +   H        
Sbjct: 197 HPEGKHYM-ALTSEGEVYSWG--NGDGGRLGHGDTNVCYKGQKVLVIVYPYHPEGK---- 249

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            H   +TS G+++++G+G  G LGHGD  S   P  V  L G +  R          VV 
Sbjct: 250 -HYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRH---------VVH 299

Query: 410 VMVGSSSSSNCSS-GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HS 466
           ++ GS+ S+  ++ G+LFTWG G+ GRLGHG  E +L PT V +L       + CG   +
Sbjct: 300 IVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDA 359

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            T+A+T  G V++ G   YG+LG   ++G    ++  +L    +  + CG      LT  
Sbjct: 360 QTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKT 419

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
             ++TWGKG + RLGHG  +   FP  +E L+ K+V  +  G+
Sbjct: 420 GHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGS 462



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 157/336 (46%), Gaps = 38/336 (11%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G+V+ WG   GDG   G    +  Y G K            V++ V      G+H   
Sbjct: 208 SEGEVYSWG--NGDGGRLGHGDTNVCYKGQK------------VLVIVYPYHPEGKHYMA 253

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL--KNI--NVELVACGEHHTCAVTLS 303
           +T +GEV+SWG   GGRLGHG  +    P L+  L  K +  +V  + CG  ++ A+T  
Sbjct: 254 LTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITAD 313

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQL 361
           G+++TWG    N+G LGHG+      P  L   L+G  V  + CG     T  VT  G +
Sbjct: 314 GELFTWG--RGNYGRLGHGSSEDQLTPT-LVVSLKGRRVIDICCGSGDAQTLAVTDDGTV 370

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +++GDG +G LG G      TP+ +D L+G   VR  CG   + A+ +            
Sbjct: 371 WSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTK------------ 418

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           +G ++TWG GD  RLGHG +E    P  +  L       V+ G    + +T  G VY  G
Sbjct: 419 TGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWG 478

Query: 482 SPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACG 516
               GQLGD   + K  PT +   L    +  IACG
Sbjct: 479 RNDQGQLGDSSFSTKSDPTLM--PLDGKSISGIACG 512



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 157/365 (43%), Gaps = 53/365 (14%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG         G +S  S     + L  + V  +AC E    A+T +G +Y     
Sbjct: 119 EVLGWGW----LAWTGANSPNSSGHTCEMLGELGVLQLACAERCLIALTKTGRVYM---- 170

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
            C +     G ++   L  K     E + V++   G  H   +TS G+++++G+G  G L
Sbjct: 171 -CFYSSESQGPQLMESLADK-----EVLKVAAHPEGK-HYMALTSEGEVYSWGNGDGGRL 223

Query: 373 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV------GSSSSSNCSSGKLF 426
           GHGD                        V +    V V+V      G    +  S G+++
Sbjct: 224 GHGD----------------------TNVCYKGQKVLVIVYPYHPEGKHYMALTSEGEVY 261

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAAL----VEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +WG+GD GRLGHGD  +R  PT V  L    +  +   + CG + + A+T  G ++T G 
Sbjct: 262 SWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGR 321

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANGRL 540
             YG+LG   +  +L   +   L    V +I CG  D     +T    V++WG G  G+L
Sbjct: 322 GNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKL 381

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSGCRIPF 596
           G G +D    P +++ L+ + +  + CG  F+ A+     +  W  G  Q +  G     
Sbjct: 382 GRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHI 441

Query: 597 NFKRK 601
            F ++
Sbjct: 442 RFPKQ 446



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 14/171 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG+  GD    G + R GS  G K     PK ++     D+  + CG + +  +T
Sbjct: 368 GTVWSWGD--GDY---GKLGRGGS-DGCK----TPKIIDRLQGQDIVRVCCGAQFSLALT 417

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           K G +++WG+    RLGHG +  +  PK ++ L+   V  VA G  H   +T  G++Y W
Sbjct: 418 KTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGW 477

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           G ++   G LG  +  +   P  +  PL+G  +S ++CGP  +   TS G 
Sbjct: 478 GRNDQ--GQLGDSSFSTKSDPTLM--PLDGKSISGIACGPAQSFCWTSTGH 524


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/340 (34%), Positives = 180/340 (52%), Gaps = 30/340 (8%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQ-GEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D   P  + +    +V ++ CG  H    ++   +V+SWG             D+  P+ 
Sbjct: 55  DRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWG------------CDLFTPQP 102

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I AL  + ++ +ACG+ H  AVT+ G++ +WG  N N G LG G      +P+K+    +
Sbjct: 103 IKALHGLRIKQIACGDSHCLAVTMDGEVQSWG-RNQN-GQLGLGTTEDSLVPQKIQ-AFQ 159

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ V  V+ G  HTA VT  G+L+ +G G +G LG GDR     P +V +++G++ V+ A
Sbjct: 160 GVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVA 219

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HT +V             SSG L+T+G    G+LGHGD E  L P  + AL E   
Sbjct: 220 CGWRHTISV------------SSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLI 267

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            ++S G   T+ALT+ G +Y  G   +GQ+G     +   P +V+    +  V  I+CG 
Sbjct: 268 SEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVH-ISCGW 326

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            H   +T R  V++WG+G NG+LGHG++ DRN P ++E L
Sbjct: 327 RHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVL 366



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 176/378 (46%), Gaps = 34/378 (8%)

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           SA V  V  I+ G  H+  +     V SWG    G+LGHG   D   P  + AL    V 
Sbjct: 12  SAPVRRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVV 71

Query: 289 LVACGEHHTCAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 347
            V CG  HT A + S   +Y+WG   C+           L+ P+ +   L G+ +  ++C
Sbjct: 72  SVTCGADHTTAYSESFTQVYSWG---CD-----------LFTPQPIK-ALHGLRIKQIAC 116

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  H   VT  G++ ++G    G LG G       P+++ + +G+     A G  HTAAV
Sbjct: 117 GDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAV 176

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
            E             G+L+ WG G  G LG GD+  RLVP  V+ +      +V+CG   
Sbjct: 177 TE------------DGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRH 224

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           T++++++G +YT G   YGQLG       L P ++E  L +N + EI+ G  H   LTS 
Sbjct: 225 TISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLE-ALQENLISEISGGWRHTMALTSD 283

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVS 582
            ++Y WG    G++G GD  D   P  V+   +++V  I CG   T A+     +  W  
Sbjct: 284 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGR 343

Query: 583 GVDQSMCSGCRIPFNFKR 600
           G +  +  G  I  N  +
Sbjct: 344 GTNGQLGHGESIDRNIPK 361


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/394 (32%), Positives = 188/394 (47%), Gaps = 29/394 (7%)

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            D D    V +WG    + +        G   G K+   VP   ++   L   +IA G + 
Sbjct: 3069 DQDLPCTVMVWGLNDKEQL--------GGLKGSKVK--VPTFSQTISRLRPIHIAGGSKS 3118

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTL 302
              +V+++G VF+ GE   GRLG GV  +V  P  +  L    V+ VA   G  H  A+TL
Sbjct: 3119 LFIVSQEGRVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTL 3178

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
             G +++WG      G LGHGN  +L  P+++   L    +  V+CG  H+A ++S G+L+
Sbjct: 3179 DGKVFSWG--EGEDGKLGHGNRTTLDKPRQVEA-LRAKKIRDVACGSSHSAAISSQGELY 3235

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSSSSNC 420
            T+G G +G LGHGD  +   P+ V +L G R V+ ACG     T A+ E           
Sbjct: 3236 TWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTE----------- 3284

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
              G +F+WGDGD G+LG G  E    P  +  L      Q+ CG   ++ALT  G V+T 
Sbjct: 3285 -DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTW 3343

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            G   Y +LG          +  G L    V  +A G  H   +T   +VY WG   +G+ 
Sbjct: 3344 GKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQ 3403

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G G+T     P+LV  L D  V  + CG+S + A
Sbjct: 3404 GSGNTFVNKKPALVIGLDDVFVNRVACGSSHSIA 3437



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 189/379 (49%), Gaps = 22/379 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++      P   E+  +L    +A G +    VT  G++F+ G   
Sbjct: 4226 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4285

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G     + P L+ +L+++ V+ VA   G  H  A+T  G++Y WG      G L
Sbjct: 4286 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWG--EGEDGKL 4343

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN +S   PK +   L G+ V+ ++CG  H+A +T++GQ+ T+G G +G LGHGD   
Sbjct: 4344 GHGNRVSYDRPKLVEH-LHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSED 4402

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG--KLFTWGDGDRGRLG 437
               P+ V++L G R +  ACG               + + C +    +++WGDGD G+LG
Sbjct: 4403 QLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGDYGKLG 4450

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   +P  + +L      +V CG   +VALT +G VYT G   + +LG    +  +
Sbjct: 4451 RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVR 4510

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V     K  +  IA G  H    +   EVYTWG    G+LG G       P LV A
Sbjct: 4511 RPKKVAALQGKKIIS-IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSA 4569

Query: 557  LKDKQVKSIVCGTSFTAAI 575
            L+ K +  + CG++ T A+
Sbjct: 4570 LQGKHIVKVTCGSAHTLAL 4588



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 150/307 (48%), Gaps = 19/307 (6%)

Query: 223  VPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
            +P  + S   + V+ +A   GG+H   +T +GEV++WGE   G+LGHG       PKL++
Sbjct: 4299 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVE 4358

Query: 281  ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
             L  ++V  +ACG  H+ A+T SG + TWG     +G LGHG+      PK +   L G 
Sbjct: 4359 HLHGMSVADIACGSAHSAAITASGQVLTWGKGR--YGRLGHGDSEDQLRPKLVEA-LLGY 4415

Query: 341  HVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
                ++CG     T  +T    ++++GDG +G LG G       P +++SL GL  ++  
Sbjct: 4416 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4475

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            CG   + A+ +            SG ++TWG GD  RLGHG  +    P  VAAL     
Sbjct: 4476 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4523

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
              ++ G    VA + +G VYT G    GQLGD         R+   L    + ++ CG  
Sbjct: 4524 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSA 4583

Query: 519  HVAVLTS 525
            H   L++
Sbjct: 4584 HTLALST 4590



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 146/286 (51%), Gaps = 25/286 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG G         V  D   PK VE    + V +IACG  H+A +T
Sbjct: 4330 GEVYAWGEGE-DGKLGHGNR-------VSYDR--PKLVEHLHGMSVADIACGSAHSAAIT 4379

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G+V +WG+   GRLGHG   D   PKL++AL       +ACG      + ++ D   W
Sbjct: 4380 ASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4439

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
               + ++G LG G      LP K+   L G+ V  V CG   +  +T +G ++T+G G F
Sbjct: 4440 SWGDGDYGKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDF 4498

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTW 428
              LGHG    V  P++V +L+G + +  A G  H  A             CS SG+++TW
Sbjct: 4499 HRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEVYTW 4545

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            GD D G+LG G   A   P  V+AL   +  +V+CG + T+AL+T+
Sbjct: 4546 GDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLALSTS 4591



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 165/333 (49%), Gaps = 33/333 (9%)

Query: 254  VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            V  WG    E+LGG  G    S V  P     +  +    +A G      V+  G ++  
Sbjct: 3076 VMVWGLNDKEQLGGLKG----SKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFAC 3131

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G   ++ LP +L  P+   +V    +V  G  H   +T  G++F++G
Sbjct: 3132 GEGTN---GRLGLGVTYNVPLPHQL--PVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3186

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+R ++  PR+V++L+  +    ACG  H+AA+             S G+L
Sbjct: 3187 EGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAI------------SSQGEL 3234

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  VAAL      QV+CG   + T+ALT  G V++ G  
Sbjct: 3235 YTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 3294

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G   P  +E +L+   V +I CG      LT   EV+TWGKG   RLGH
Sbjct: 3295 DFGKLGRGGSEGSDTPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3353

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P  +  L+ ++V  +  G     A+
Sbjct: 3354 GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAV 3386



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 145/309 (46%), Gaps = 35/309 (11%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA- 291
             V+ + C      L++++G++ +W      RL        + P+ ++   +     +A 
Sbjct: 587 FQVKQVVCSENQVLLLSQEGKLHAW------RL----SKPEAEPQPLEEAGHETFISIAG 636

Query: 292 -CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
            C   H  A+  + + Y+WG    +   LGHG+  +  +P K+   LE   V SV CG  
Sbjct: 637 HCEGRHFMAIDSNHNAYSWGAGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVFCGCT 693

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           ++AV+T  G L T+G GT+  LGHG+      P  V +L             HT  VV+V
Sbjct: 694 YSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAE-----------HT--VVDV 740

Query: 411 MVGSSSSSNC---SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
            +GS  + +    S G +F WGDGD G+LG+G+    L P  V +L  P   ++  G   
Sbjct: 741 ALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRIFAGSQY 798

Query: 468 TVALTTTGHVYTMGSP--VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
           +VAL++ G VYT G    +  QL +    G    R+   L    + ++A G  H   L+S
Sbjct: 799 SVALSSEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSS 858

Query: 526 RTEVYTWGK 534
             EV+ WG+
Sbjct: 859 SGEVFGWGR 867



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 21/214 (9%)

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           ++WG G+  RLGHGD  AR VPT +AAL +     V CG + +  +T  G++ T G   Y
Sbjct: 653 YSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTY 712

Query: 486 GQLGDPKANGK-LPTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGRLGH 542
            +LG   ++ + LPT V   L ++ V ++A   GD H   LTS   V+ WG G  G+LG+
Sbjct: 713 ARLGHGNSDDRCLPTLV-AALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 771

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI-------------CL-HKWVSGVDQSM 588
           G+ +    P LVE+L   +V+ I  G+ ++ A+             CL H+ V    Q  
Sbjct: 772 GNCNGSLQPILVESL--PRVQRIFAGSQYSVALSSEGQVYTWGKATCLGHQLVERSVQG- 828

Query: 589 CSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 622
           CS  R+  + + KR      G+ +C   SS   V
Sbjct: 829 CSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEV 862



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 121/257 (47%), Gaps = 30/257 (11%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  ++ +G    G LG   G RI   TP E  SL  LR V+ A G     AV        
Sbjct: 4223 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAVT------- 4273

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKLF  G G  GRLG G  ++  +PT + +L  V      V+ G    +ALTT
Sbjct: 4274 -----PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4328

Query: 474  TGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G VY  G    G+LG   + +   P  VE  L    V +IACG  H A +T+  +V TW
Sbjct: 4329 EGEVYAWGEGEDGKLGHGNRVSYDRPKLVE-HLHGMSVADIACGSAHSAAITASGQVLTW 4387

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG----- 583
            GKG  GRLGHGD++D+  P LVEAL   +   I CG+     +C+    + W  G     
Sbjct: 4388 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4447

Query: 584  -VDQSMCSGCRIPFNFK 599
             + +    GC++P+  +
Sbjct: 4448 KLGRGGSDGCKLPYKIE 4464



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 121/270 (44%), Gaps = 53/270 (19%)

Query: 181 SGHDDG------DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           +GH +G      DS  + + WG         G  HR G   G      VP  + +     
Sbjct: 635 AGHCEGRHFMAIDSNHNAYSWG--------AGEDHRLGH--GDTHARAVPTKIAALEQHC 684

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
           VQ++ CG  ++A++T  G + +WG     RLGHG   D   P L+ AL    V  VA   
Sbjct: 685 VQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGS 744

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS------VS 346
           G+ H+ A+T  G ++ WG  + ++G LG+GN          NG L+ I V S      + 
Sbjct: 745 GDAHSLALTSEGLVFAWG--DGDYGKLGNGN---------CNGSLQPILVESLPRVQRIF 793

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG----DRISVSTPREVDSLKGLRTVRAACGVW 402
            G  ++  ++S GQ++T+G  T   LGH          S PR V SL+  R V  A GV 
Sbjct: 794 AGSQYSVALSSEGQVYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVA 851

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           H  A+             SSG++F WG  D
Sbjct: 852 HCLAL------------SSSGEVFGWGRND 869



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 4/158 (2%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            G++F  G+G  GRLG G      +P  +  L +    +V+   G    +ALT  G V++ 
Sbjct: 3126 GRVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3185

Query: 481  GSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            G    G+LG   +     P +VE    K  + ++ACG  H A ++S+ E+YTWG G  GR
Sbjct: 3186 GEGEDGKLGHGNRTTLDKPRQVEALRAKK-IRDVACGSSHSAAISSQGELYTWGLGEYGR 3244

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            LGHGD   +  P LV AL  ++V  + CG+     + L
Sbjct: 3245 LGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLAL 3282



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 2/110 (1%)

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           +A+ +  + Y+ G+    +LG    + + +PT++   L ++ V+ + CG  + AV+T   
Sbjct: 644 MAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVFCGCTYSAVITCGG 702

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            + TWG+G   RLGHG++DDR  P+LV AL +  V  +  G+    ++ L
Sbjct: 703 NLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLAL 752



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 12/118 (10%)

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA--CGD 517
           QV C  +  + L+  G ++        +L  P+A    P  +E    + F+  IA  C  
Sbjct: 591 QVVCSENQVLLLSQEGKLHAW------RLSKPEAE---PQPLEEAGHETFIS-IAGHCEG 640

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            H   + S    Y+WG G + RLGHGDT  R  P+ + AL+   V+S+ CG +++A I
Sbjct: 641 RHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVI 698



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 28/188 (14%)

Query: 140 CGSVNSLSSG-GSDGRTGHLKGLSGDTFRVSLSSAVSSSSQ---GSGHDDGDSL-----G 190
           CG  N L+ G G+  R GH  G S D    +L +A++  +      G  D  SL     G
Sbjct: 700 CGG-NLLTWGRGTYARLGH--GNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEG 756

Query: 191 DVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            VF WG+  GD G LG G + +GS   + ++S  P+         VQ I  G +++  ++
Sbjct: 757 LVFAWGD--GDYGKLGNG-NCNGSLQPILVESL-PR---------VQRIFAGSQYSVALS 803

Query: 250 KQGEVFSWGEE--LGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +G+V++WG+   LG +L        S P+L+ +L++  +  +A G  H  A++ SG+++
Sbjct: 804 SEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVF 863

Query: 308 TWGGSNCN 315
            WG ++C 
Sbjct: 864 GWGRNDCQ 871


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 238/483 (49%), Gaps = 46/483 (9%)

Query: 112  PKNVLDKALSDAVLYAAPPKVLLPSESACG---SVNSLSSGGSDGRTGHLKGLSGDTFRV 168
            P +V+ + L+D   Y A  ++L+      G    ++ L+  G   +T     L   +F  
Sbjct: 2820 PTDVVVQLLNDCKQYYAWIEILVKQCRNNGIQCKIHGLNIIGKRKQTDLEMMLQNASFLA 2879

Query: 169  SL--SSAVSSSSQGSGHDDGDSLGD----VFIWGECTGDGILGGGIHRSGSYAGVKMDSF 222
            +   S+A  S S  S + D  S  +    V +WG    D    GG+  S     VK+ ++
Sbjct: 2880 TENDSAAEPSYSTSSNYADEQSSNEISSKVLVWG--LNDKEQLGGLKGSK----VKLPTY 2933

Query: 223  VPKAVESAVVLDVQ--NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
                  S+V+  ++  +I+ G +   +V++ G++++ GE   GRLG G +++V  P+ + 
Sbjct: 2934 ------SSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVP 2987

Query: 281  ALKNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPL 337
             L    V+ VA   G  H  A+TL G +++WG G +   G LGHGN ++L  PK L   L
Sbjct: 2988 ILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGED---GKLGHGNRVTLEKPKLLES-L 3043

Query: 338  EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
                +  ++CG  H+A +TS+G+L+T+G G +G LGHGD  +   P+ V +L+G R V+ 
Sbjct: 3044 RTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQGHRVVQV 3103

Query: 398  ACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            ACG               + + C    G +F+WGDGD G+LG G  E   VP  V  L  
Sbjct: 3104 ACG------------SRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNG 3151

Query: 456  PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIA 514
                Q+ CG   ++ALT  G V+T G   Y +LG     + + PT ++G   K  +  +A
Sbjct: 3152 VGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVI-HVA 3210

Query: 515  CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             G  H   +T   +V+ WG   +G+ G G+T     P+LV  L    V  + CG+S + A
Sbjct: 3211 VGALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVA 3270

Query: 575  ICL 577
              L
Sbjct: 3271 WSL 3273



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 159/322 (49%), Gaps = 42/322 (13%)

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I+   ++ V  VAC E+    VT SG +Y+            H +      PK + G LE
Sbjct: 528 IELPPSLQVRQVACTENSIYIVTTSGQLYSI-----------HSSCAETVAPKLVEG-LE 575

Query: 339 GIHVSSVS--CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
           G+ V  ++  C   H   ++SAG+++++G G  G LGHGD  S   P ++   K +  + 
Sbjct: 576 GVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIY 635

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
           A  G  ++AAV  V            G+LFTWG G  GRLGHG+ + + VPT V AL   
Sbjct: 636 A--GASYSAAVSSV------------GELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAY 681

Query: 457 NFCQVSCG----HSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVE 511
               V+ G    HS+  A+T  G ++  G   +G+LG+   NG  LP ++EG    + V 
Sbjct: 682 KVVDVALGSGDAHSM--AVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGV---SSVA 736

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            I  G      L+    +Y+WGKG  GRLGHG+++  N P LV AL+ K++  +  G++ 
Sbjct: 737 RIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAH 796

Query: 572 TAAIC----LHKWVSGVDQSMC 589
             A+     L+ W     Q +C
Sbjct: 797 CLALTSSGELYGWGRNDYQQIC 818



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 166/368 (45%), Gaps = 54/368 (14%)

Query: 254  VFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
            +F WG    G+LG G+D S +  P   +AL  +    +A GE    AVT  G +Y  G  
Sbjct: 3946 IFGWGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4004

Query: 313  NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTFG 370
                  +G  + +S      L   L+ + +  V+   G  H   ++S G++F++G+G  G
Sbjct: 4005 AGGRLGIGGTDSVS---TPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4061

Query: 371  VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
             LGHG+R S   P+ +++L G+  V  ACG  H+A +             S G + TWG 
Sbjct: 4062 KLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACIT------------SQGHVLTWGK 4109

Query: 431  GDRGRLGHGDKEARLVPT-CV---------------AALVEP-----------------N 457
            G  GRLGHGD E +L P  CV               A+L E                   
Sbjct: 4110 GRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLG 4169

Query: 458  FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACG 516
              +V CG   +VALT +G VYT G   Y +LG    +  + P +V     K  +  IA G
Sbjct: 4170 VIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIIS-IATG 4228

Query: 517  DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
              H    +   EV+TWG    G+LG G       P LV++L+ K +  ++CG++ T A+ 
Sbjct: 4229 SLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4288

Query: 577  LHKWVSGV 584
             ++    V
Sbjct: 4289 TYQLSEAV 4296



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 135/274 (49%), Gaps = 25/274 (9%)

Query: 220 DSFVPKAVESAVVLDVQNIA--CGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           ++  PK VE    + V  IA  C GRHA  ++  GEV+SWG   GGRLGHG  +    P 
Sbjct: 564 ETVAPKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPT 623

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL 337
            I   K +    +  G  ++ AV+  G+++TWG     +G LGHGN    ++P ++   L
Sbjct: 624 KIALEKQVTA--IYAGASYSAAVSSVGELFTWGRGT--YGRLGHGNSDDKFVPTQVQA-L 678

Query: 338 EGIHVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
           +   V  V+ G    H+  VT  G LF +GDG FG LG+G       P +++ +      
Sbjct: 679 KAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGV------ 732

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
                    ++V  +  GS  S   S  G L++WG G  GRLGHG+ E   VP  V AL 
Sbjct: 733 ---------SSVARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALE 783

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
                 V+ G +  +ALT++G +Y  G   Y Q+
Sbjct: 784 GKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQI 817



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 177/391 (45%), Gaps = 43/391 (10%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA- 291
           L V+ +AC      +VT  G+++S          H   ++   PKL++ L+ ++V  +A 
Sbjct: 534 LQVRQVACTENSIYIVTTSGQLYSI---------HSSCAETVAPKLVEGLEGVSVIQIAA 584

Query: 292 -CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
            C   H  A++ +G++Y+WG      G LGHG+  S  +P K+   LE   V+++  G  
Sbjct: 585 HCEGRHAMALSSAGEVYSWGAGEG--GRLGHGDTASKEVPTKI--ALEK-QVTAIYAGAS 639

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVV 408
           ++A V+S G+LFT+G GT+G LGHG+      P +V +LK  + V  A G    H+ AV 
Sbjct: 640 YSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVT 699

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
           +             G LF WGDGD G+LG+G      +P  +  +   +  ++  G   +
Sbjct: 700 D------------GGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGV--SSVARIYSGSQFS 745

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           VAL+  G +Y+ G    G+LG   + +  +P  V     K  V ++A G  H   LTS  
Sbjct: 746 VALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIV-DVAVGSAHCLALTSSG 804

Query: 528 EVYTWGKGANGRLGHGDT--DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVD 585
           E+Y WG+    ++       D      L+      ++  + CG + +   C         
Sbjct: 805 ELYGWGRNDYQQICPSGVSRDPIITTPLLTTPPTLRISGMTCGAAQSIVWC-------AS 857

Query: 586 QSMCSGCRIPFNFKRKRHNCYNCGLVYCHTC 616
            ++    +IPF      H       + C  C
Sbjct: 858 STLGVASKIPFVVDLSEHTFRQLDQLLCMVC 888



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 168/370 (45%), Gaps = 55/370 (14%)

Query: 193  FIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            F WG  +   I G G +  G   G+      +P   E+  +L    IA G +    VT  
Sbjct: 3938 FSWGGAST--IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPD 3995

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ G   GGRLG G    VS P L+++L+++ ++ VA   G  H  A++  G++++W
Sbjct: 3996 GKLYATGYGAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSW 4055

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN  S   PK +   L GI V  ++CG  H+A +TS G + T+G G 
Sbjct: 4056 GEGED---GKLGHGNRDSYDRPKLIEA-LSGIGVVDIACGSAHSACITSQGHVLTWGKGR 4111

Query: 369  FGVLGHGDR---------------------------------ISVSTPREVDSLKGLRTV 395
            +G LGHGD                                  +   +P +++SL GL  +
Sbjct: 4112 YGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVI 4171

Query: 396  RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            +  CG   + A+              SG ++TWG GD  RLGHG+ +    P  VAAL  
Sbjct: 4172 KVECGSQFSVALTR------------SGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQG 4219

Query: 456  PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 515
                 ++ G    VA + +G V+T G    GQLGD         R+   L    + ++ C
Sbjct: 4220 KKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVIC 4279

Query: 516  GDYHVAVLTS 525
            G  H   L++
Sbjct: 4280 GSAHTLALST 4289



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 123/254 (48%), Gaps = 37/254 (14%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD--VQNIACGGRHA 245
           S G+V+ WG   G G LG G   S             K V + + L+  V  I  G  ++
Sbjct: 596 SAGEVYSWGAGEG-GRLGHGDTAS-------------KEVPTKIALEKQVTAIYAGASYS 641

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLS 303
           A V+  GE+F+WG    GRLGHG   D   P  + ALK   V  VA   G+ H+ AVT  
Sbjct: 642 AAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDG 701

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHTAVVTSAGQLF 362
           G ++ WG  + +FG LG+G+     LP +    +EG+  V+ +  G   +  ++  G L+
Sbjct: 702 GLLFAWG--DGDFGKLGNGSCNGSPLPVQ----IEGVSSVARIYSGSQFSVALSYDGTLY 755

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           ++G G  G LGHG+    + P+ V +L+G + V  A G  H  A+             SS
Sbjct: 756 SWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALT------------SS 803

Query: 423 GKLFTWGDGDRGRL 436
           G+L+ WG  D  ++
Sbjct: 804 GELYGWGRNDYQQI 817



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 92/191 (48%), Gaps = 14/191 (7%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GKL+  G+G  GRLG G       P  V  L +    +V+   G    +ALT  G V++ 
Sbjct: 2959 GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSW 3018

Query: 481  GSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            G    G+LG   +   + P  +E   TK  + +IACG  H A +TS  E+YTWG G  GR
Sbjct: 3019 GEGEDGKLGHGNRVTLEKPKLLESLRTKR-IRDIACGSSHSAAITSSGELYTWGLGEYGR 3077

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VDQSMC 589
            LGHGD   +  P LV AL+  +V  + CG+     +CL +      W  G    + +   
Sbjct: 3078 LGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGS 3137

Query: 590  SGCRIPFNFKR 600
             GC +P   +R
Sbjct: 3138 EGCSVPHQVER 3148



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 106/222 (47%), Gaps = 23/222 (10%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  +F +G    G LG   G RI + TP E  SL  LR ++ A G     AV        
Sbjct: 3943 ASTIFGWGHNHRGQLGGLDGSRIKMPTPCEALSL--LRPIQIAGGEQTLYAVT------- 3993

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKL+  G G  GRLG G  ++   PT V +L  V      V+ G    +AL++
Sbjct: 3994 -----PDGKLYATGYGAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSS 4048

Query: 474  TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
             G V++ G    G+LG    +     ++   L+   V +IACG  H A +TS+  V TWG
Sbjct: 4049 DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWG 4108

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            KG  GRLGHGD++D+  P     L+     +I+CG   TA +
Sbjct: 4109 KGRYGRLGHGDSEDQLQPKRC-VLR----TTIMCGVGVTAIM 4145



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 98/215 (45%), Gaps = 33/215 (15%)

Query: 107 SYESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGG--SDGRTGHLKGLSGD 164
           S E P K  L+K ++   +YA          +A  SV  L + G  + GR GH  G S D
Sbjct: 618 SKEVPTKIALEKQVT--AIYAGASY-----SAAVSSVGELFTWGRGTYGRLGH--GNSDD 668

Query: 165 TF---RVSLSSAVSSSSQGSGHDDGDSL-----GDVFIWGECTGD-GILGGGIHRSGSYA 215
            F   +V    A        G  D  S+     G +F WG+  GD G LG G   +GS  
Sbjct: 669 KFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGD--GDFGKLGNG-SCNGS-- 723

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
                   P  V+   V  V  I  G + +  ++  G ++SWG+  GGRLGHG     + 
Sbjct: 724 --------PLPVQIEGVSSVARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNV 775

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           PKL+ AL+   +  VA G  H  A+T SG++Y WG
Sbjct: 776 PKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  180 bits (457), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 181/347 (52%), Gaps = 23/347 (6%)

Query: 237  NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GE 294
            +IA G +   +V++ G++++ GE   GRLG G +++V  PK +  L    V+ VA   G 
Sbjct: 3065 HIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGG 3124

Query: 295  HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
             H  A+TL G +++WG G +   G LGHGN ++L  PK +   L    +  ++CG  H+A
Sbjct: 3125 KHAMALTLDGKVFSWGEGED---GKLGHGNRLTLEKPKLIE-TLRTKRIRDIACGSSHSA 3180

Query: 354  VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
             +TS+G+L+T+G G +G LGHGD  +   P+ V +L+  R V+ ACG             
Sbjct: 3181 AITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVVQVACG------------S 3228

Query: 414  SSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
              + + C    G +F+WGDGD G+LG G  E   +P  V  L      Q+ CG   ++AL
Sbjct: 3229 RDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLAL 3288

Query: 472  TTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
            T  G V+T G   Y +LG     + + PT ++G   K  +  +A G  H   +T   +VY
Sbjct: 3289 TKAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVI-HVAVGALHCLAVTDSGQVY 3347

Query: 531  TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
             WG   +G+ G G+T     PSLV  L    V  + CG+S + A  L
Sbjct: 3348 AWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAWSL 3394



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 196/399 (49%), Gaps = 26/399 (6%)

Query: 193  FIWGECTGDGILGGGIHRSGSYAGVKMDSFV-PKAVESAVVLDVQNIACGGRHAALVTKQ 251
            F WG  +   I G G +  G   G+       P   E+  +L    IA G +    VT  
Sbjct: 4083 FSWGGAST--IFGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPD 4140

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ G   GGRLG G    V+ P L+++L+++ ++ VA   G  H  A++  G++++W
Sbjct: 4141 GKLYATGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSW 4200

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN  S   PK +   L GI V  ++CG  H+A +T  G + T+G G 
Sbjct: 4201 GEGED---GKLGHGNRDSYDRPKLIES-LSGIGVVDIACGSAHSACITIQGHVLTWGKGR 4256

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLF 426
            +G LGHGD      P+ V++L G R +  ACG               + + C      ++
Sbjct: 4257 YGRLGHGDSEDQLQPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVW 4304

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            +WGDGD G+LG G  +   VP  + +L      +V CG   +VALT +G VYT G   Y 
Sbjct: 4305 SWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYH 4364

Query: 487  QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            +LG    +  + P +V     K  +  IA G  H    +   EV+TWG    G+LG G  
Sbjct: 4365 RLGHGNTDHVRRPKKVAALQGKKII-SIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTV 4423

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGV 584
                 P LV++L+ K +  ++CG++ T A+  ++    V
Sbjct: 4424 SAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAV 4462



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 153/301 (50%), Gaps = 21/301 (6%)

Query: 224  PKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
            PK V       V+ +A   GG+HA  +T  G+VFSWGE   G+LGHG    +  PKLI+ 
Sbjct: 3104 PKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIET 3163

Query: 282  LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            L+   +  +ACG  H+ A+T SG++YTWG     +G LGHG+  +   PK +   L+   
Sbjct: 3164 LRTKRIRDIACGSSHSAAITSSGELYTWGLG--EYGRLGHGDNCTQLKPKLVTA-LQDHR 3220

Query: 342  VSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
            V  V+CG     T  +T  G +F++GDG FG LG G     S P +VD L G+  ++  C
Sbjct: 3221 VVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIEC 3280

Query: 400  GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
            G   + A+ +            +G+++TWG GD  RLGHG  +    PT +  L      
Sbjct: 3281 GAQFSLALTK------------AGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVI 3328

Query: 460  QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDY 518
             V+ G    +A+T +G VY  G   +GQ G       K P+ V G L   FV  +ACG  
Sbjct: 3329 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLG-LDGIFVNRVACGSS 3387

Query: 519  H 519
            H
Sbjct: 3388 H 3388



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 31/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WGE   DG LG G            DS+  PK +ES   + V +IACG  H+A +
Sbjct: 4195 GEVFSWGEGE-DGKLGHG----------NRDSYDRPKLIESLSGIGVVDIACGSAHSACI 4243

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDM 306
            T QG V +WG+   GRLGHG   D   PKL++AL       +AC  G+  T  +T   ++
Sbjct: 4244 TIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNV 4303

Query: 307  YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            ++WG  + ++G LG G      +P K+   L G+ V+ V CG   +  +T +G ++T+G 
Sbjct: 4304 WSWG--DGDYGKLGRGGSDGCKVPMKIES-LAGLGVTKVECGSQFSVALTRSGSVYTWGK 4360

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKL 425
            G +  LGHG+   V  P++V +L+G + +  A G  H  A             CS +G++
Sbjct: 4361 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDAGEV 4407

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            FTWGD D G+LG G   A   P  V +L   +  +V CG + T+AL+T
Sbjct: 4408 FTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALST 4455



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 169/334 (50%), Gaps = 33/334 (9%)

Query: 253  EVFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            +V  WG    E+LGG  G    S V  P     L  +    +A G      V+  G +Y 
Sbjct: 3029 KVLVWGLNDKEQLGGLKG----SKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYA 3084

Query: 309  WG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTF 364
             G G+N   GL GH N +    PK++  P+   +V    +V  G  H   +T  G++F++
Sbjct: 3085 CGEGTNGRLGL-GHNNNVPT--PKQV--PILSQYVVKKVAVHSGGKHAMALTLDGKVFSW 3139

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            G+G  G LGHG+R+++  P+ +++L+  R    ACG  H+AA+             SSG+
Sbjct: 3140 GEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAIT------------SSGE 3187

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGS 482
            L+TWG G+ GRLGHGD   +L P  V AL +    QV+CG   + T+ LT  G V++ G 
Sbjct: 3188 LYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGD 3247

Query: 483  PVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              +G+LG   + G  +P +V+ +L    V +I CG      LT   EV+TWGKG   RLG
Sbjct: 3248 GDFGKLGRGGSEGCSIPHQVD-RLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLG 3306

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            HG       P+ ++ L+ K+V  +  G     A+
Sbjct: 3307 HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAV 3340



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 130/252 (51%), Gaps = 19/252 (7%)

Query: 240 CGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA 299
           C GRH   +   G+V+SWG   GGRLGHG  S    P  I AL +  V  V CG  ++ A
Sbjct: 616 CEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAA 675

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG--PLEGIHVSSVSCGPWHTAVVTS 357
           +T SG++YTWG     +G LGHGN    ++P  +        +HV ++ CG  H+  VT 
Sbjct: 676 ITASGELYTWG--RGTYGRLGHGNSEDKYVPTLVTALKAHRVVHV-ALGCGDAHSLCVTE 732

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           AG  F +GDG FG LG+   +  S P +VD        +A+C       VV+V  GS  S
Sbjct: 733 AGLAFAWGDGDFGKLGNESCVGTSVPVQVD------LPQASC-------VVKVFSGSQFS 779

Query: 418 SNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
              +  G ++TWG G  GRLGHG+ E   VP  V AL       ++ G +  +ALT +G 
Sbjct: 780 VALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGE 839

Query: 477 VYTMGSPVYGQL 488
           +Y  G   + Q+
Sbjct: 840 LYGWGRNDFQQI 851



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 156/324 (48%), Gaps = 32/324 (9%)

Query: 219 MDSFVPKAVESAV--VLD-VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVS 274
           +D  +P+   + +  +LD V+ I C      ++T  G V          L H +  ++ +
Sbjct: 546 IDGAMPRYSTATIDLLLDQVRQIVCAENCVYILTDSGTVL--------YLSHAISMTEDN 597

Query: 275 HPKLIDALKNINVELVA-CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
           +P  +  L+   V+L A C   H  A+  SGD+Y+WG  +   G LGHG+  +  LP ++
Sbjct: 598 YPAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDG--GRLGHGDTSAKELPTRI 655

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 393
              L    V+ V CG  ++A +T++G+L+T+G GT+G LGHG+      P  V +LK  R
Sbjct: 656 -AALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHR 714

Query: 394 TVRAA--CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
            V  A  CG  H+  V E            +G  F WGDGD G+LG+       VP  V 
Sbjct: 715 VVHVALGCGDAHSLCVTE------------AGLAFAWGDGDFGKLGNESCVGTSVPVQVD 762

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFV 510
                   +V  G   +VALT  G VYT G    G+LG   + +  +P  V+    K  V
Sbjct: 763 LPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIV 822

Query: 511 EEIACGDYHVAVLTSRTEVYTWGK 534
            ++A G  H   LT+  E+Y WG+
Sbjct: 823 -DLAVGLAHCLALTASGELYGWGR 845



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 127/253 (50%), Gaps = 20/253 (7%)

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
           C   H   + S+G ++++G G  G LGHGD  +   P  + +L   +     CG  ++AA
Sbjct: 616 CEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAA 675

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS--CG 464
           +             +SG+L+TWG G  GRLGHG+ E + VPT V AL       V+  CG
Sbjct: 676 IT------------ASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCG 723

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVL 523
            + ++ +T  G  +  G   +G+LG+    G  +P +V+       V+  +   + VA L
Sbjct: 724 DAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVA-L 782

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG----TSFTAAICLHK 579
           T    VYTWGKG  GRLGHG+++    P +V+AL+ K++  +  G     + TA+  L+ 
Sbjct: 783 TREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYG 842

Query: 580 WVSGVDQSMCSGC 592
           W     Q +C  C
Sbjct: 843 WGRNDFQQICPEC 855



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 107/225 (47%), Gaps = 13/225 (5%)

Query: 354 VVTSAGQLFTFGD-GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           +V +   ++   D GT   L H   IS++       +KGL      C +   AA  E   
Sbjct: 568 IVCAENCVYILTDSGTVLYLSHA--ISMTEDNYPAQVKGLE-----CTIVQLAAHCE--- 617

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G    +  SSG +++WG GD GRLGHGD  A+ +PT +AAL +     V CG S + A+T
Sbjct: 618 GRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAIT 677

Query: 473 TTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVE-EIACGDYHVAVLTSRTEVY 530
            +G +YT G   YG+LG   +  K +PT V        V   + CGD H   +T     +
Sbjct: 678 ASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAF 737

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            WG G  G+LG+      + P  V+  +   V  +  G+ F+ A+
Sbjct: 738 AWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVAL 782



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 92/191 (48%), Gaps = 14/191 (7%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GKL+  G+G  GRLG G       P  V  L +    +V+   G    +ALT  G V++ 
Sbjct: 3080 GKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSW 3139

Query: 481  GSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            G    G+LG   +   + P  +E   TK  + +IACG  H A +TS  E+YTWG G  GR
Sbjct: 3140 GEGEDGKLGHGNRLTLEKPKLIETLRTKR-IRDIACGSSHSAAITSSGELYTWGLGEYGR 3198

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VDQSMC 589
            LGHGD   +  P LV AL+D +V  + CG+     +CL +      W  G    + +   
Sbjct: 3199 LGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGS 3258

Query: 590  SGCRIPFNFKR 600
             GC IP    R
Sbjct: 3259 EGCSIPHQVDR 3269



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 116/254 (45%), Gaps = 24/254 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            A  +F +G    G LG  D   +  P   ++L  LR ++ A G     AV          
Sbjct: 4088 ASTIFGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVT--------- 4138

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
                 GKL+  G G  GRLG G  ++   PT V +L  V      V+ G    +AL++ G
Sbjct: 4139 ---PDGKLYATGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDG 4195

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             V++ G    G+LG    +     ++   L+   V +IACG  H A +T +  V TWGKG
Sbjct: 4196 EVFSWGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKG 4255

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG------VD 585
              GRLGHGD++D+  P LVEAL   +   I CG+     +C+    + W  G      + 
Sbjct: 4256 RYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4315

Query: 586  QSMCSGCRIPFNFK 599
            +    GC++P   +
Sbjct: 4316 RGGSDGCKVPMKIE 4329



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 12/149 (8%)

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            +AL ++G VY+ GS   G+LG    + K LPTR+   L    V  + CG  + A +T+ 
Sbjct: 621 VLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRI-AALADRQVTGVFCGSSYSAAITAS 679

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------W 580
            E+YTWG+G  GRLGHG+++D+  P+LV ALK  +V  +  G     ++C+ +      W
Sbjct: 680 GELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAW 739

Query: 581 VSG----VDQSMCSGCRIPFNFKRKRHNC 605
             G    +    C G  +P      + +C
Sbjct: 740 GDGDFGKLGNESCVGTSVPVQVDLPQASC 768



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 20/169 (11%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSAVSSSSQ---GSGHDDGDSL-----GDVFIWGECTGD 201
           G+ GR GH  G S D +  +L +A+ +        G  D  SL     G  F WG    D
Sbjct: 688 GTYGRLGH--GNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWG----D 741

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           G  G   + S     V +   +P+A  S VV     +  G + +  +T++G V++WG+  
Sbjct: 742 GDFGKLGNESCVGTSVPVQVDLPQA--SCVV----KVFSGSQFSVALTREGTVYTWGKGH 795

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           GGRLGHG       PK++ AL+   +  +A G  H  A+T SG++Y WG
Sbjct: 796 GGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWG 844



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 10/113 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WG+        G  +R G   G       P  ++      V ++A G  H   VT
Sbjct: 3292 GEVWTWGK--------GDYYRLGH--GTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVT 3341

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
              G+V++WG+   G+ G G       P L+  L  I V  VACG  H+ A +L
Sbjct: 3342 DSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAWSL 3394


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 144/449 (32%), Positives = 222/449 (49%), Gaps = 43/449 (9%)

Query: 143  VNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVS--SSSQGSGHDDGDSLGD----VFIWG 196
            V+ LS  G   +T     L    F  S +  ++  S S  S + D  SL +    V +WG
Sbjct: 3188 VHGLSIVGKRRQTNLESMLQAAGFLASENETIAEPSYSTSSNYADEPSLNELSSKVLVWG 3247

Query: 197  ECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQ--NIACGGRHAALVTKQGEV 254
                D    GG+  S     VK+ ++      S+V+  ++  +IA G +   +V++ G++
Sbjct: 3248 --LNDKEQLGGLKGSK----VKLPTY------SSVLSQLKPIHIAGGSKSLFIVSQDGKL 3295

Query: 255  FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG-G 311
            ++ GE   GRLG G +++V  PK +  L    V+ VA   G  H  A+TL G +++WG G
Sbjct: 3296 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3355

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
             +   G LGHGN ++L  PK +   L    +  ++CG  H+A +TS+G+L+T+G G +G 
Sbjct: 3356 ED---GKLGHGNRLTLEKPKLIE-TLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3411

Query: 372  LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWG 429
            LGHGD  +   P+ V +L   R V+ ACG               + + C    G +F+WG
Sbjct: 3412 LGHGDNCTQLKPKLVTALADHRVVQVACG------------SRDAQTLCLTEEGLVFSWG 3459

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            DGD G+LG G  E   +P  V  L      Q+ CG   ++ALT +G V+T G   Y +LG
Sbjct: 3460 DGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLG 3519

Query: 490  D-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
                 + + PT ++G   K  +  +A G  H   +T   +VY WG   +G+ G G+T   
Sbjct: 3520 HGTDQHVRKPTPIQGLRGKKVIH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVN 3578

Query: 549  NFPSLVEALKDKQVKSIVCGTSFTAAICL 577
              PSLV  L    V  + CG+S + A  L
Sbjct: 3579 KKPSLVLGLDGIFVNRVACGSSHSVAWSL 3607



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 198/399 (49%), Gaps = 26/399 (6%)

Query: 193  FIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            F WG  +   I G G +  G   G+      +P   E+  +L    IA G +    VT  
Sbjct: 4371 FSWGGAST--IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPD 4428

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++++ G   GGRLG G    V+ P L+++L+++ ++ VA   G  H  A++  G++++W
Sbjct: 4429 GKLYATGYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSW 4488

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G G +   G LGHGN  S   PK +   L GI V  ++CG  H+A +TS G + T+G G 
Sbjct: 4489 GEGED---GKLGHGNRDSYDRPKLIEA-LSGIGVIDIACGSAHSACITSQGHVLTWGKGR 4544

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLF 426
            +G LGHGD      P+ V++L G R +  ACG               + + C      ++
Sbjct: 4545 YGRLGHGDSEDQLQPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVW 4592

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            +WGDGD G+LG G  +   VP  + +L      +V CG   +VALT +G VYT G   Y 
Sbjct: 4593 SWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYH 4652

Query: 487  QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            +LG    +  + P +V     K  +  IA G  H    +   EV+TWG    G+LG G  
Sbjct: 4653 RLGHGNTDHVRRPKKVAALQGKKII-SIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTV 4711

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGV 584
                 P LV++L+ K +  ++CG++ T A+  ++    V
Sbjct: 4712 SAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAV 4750



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/288 (35%), Positives = 151/288 (52%), Gaps = 31/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WGE   DG LG G            DS+  PK +E+   + V +IACG  H+A +
Sbjct: 4483 GEVFSWGEGE-DGKLGHG----------NRDSYDRPKLIEALSGIGVIDIACGSAHSACI 4531

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDM 306
            T QG V +WG+   GRLGHG   D   PKL++AL       +AC  G+  T  +T   ++
Sbjct: 4532 TSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNV 4591

Query: 307  YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            ++WG  + ++G LG G      +P K+   L G+ V+ V CG   +  +T +G ++T+G 
Sbjct: 4592 WSWG--DGDYGKLGRGGSDGCKVPMKIES-LAGLGVTKVECGSQFSVALTRSGSVYTWGK 4648

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GKL 425
            G +  LGHG+   V  P++V +L+G + +  A G  H  A             CS  G++
Sbjct: 4649 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDGGEV 4695

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            FTWGD D G+LG G   A   P  V +L   +  +V CG + T+AL+T
Sbjct: 4696 FTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALST 4743



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 32/350 (9%)

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F   E T     G   +    +A      +    +E    + V+ +AC      ++T  G
Sbjct: 542 FTAAEATNPDATGTAANNVACFAHGSTSRYSTATIELPAGVQVRQVACSETSIYILTTTG 601

Query: 253 EVFSWGEELGGRLGHGV--DSDVSHPKLIDALKNINVELVA--CGEHHTCAVTLSGDMYT 308
           +V S        L H      D + PK I+ L+++N+  +A  C   H  A+T +GD+++
Sbjct: 602 QVLS--------LQHSNCHTPDTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFS 653

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG  N   G LGHG+  S  +P ++    E   V+ V CG  ++A +T+AG+L+T+G GT
Sbjct: 654 WG--NGEGGRLGHGDTSSKDIPTRIVALAER-QVTGVFCGSSYSAAITAAGELYTWGRGT 710

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAA--CGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           +G LGHG+      P  V  LK  R +  A  CG  H+  V +            +G ++
Sbjct: 711 YGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTD------------TGIVY 758

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAA-LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            WGDGD G+LG+G      VP  +          +V  G   +VAL   G VY+ G    
Sbjct: 759 AWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHG 818

Query: 486 GQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           G+LG   +     P  ++    KN V ++A G  H   LT+  E+Y WG+
Sbjct: 819 GRLGHGHSEHTASPKAIQALEGKNIV-DLAVGLAHCLALTASGELYGWGR 867



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 136/277 (49%), Gaps = 20/277 (7%)

Query: 220 DSFVPKAVESAVVLDVQNIA--CGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           D+  PK +E    +++  +A  C GRH   +T  G+VFSWG   GGRLGHG  S    P 
Sbjct: 615 DTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPT 674

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK--KLNG 335
            I AL    V  V CG  ++ A+T +G++YTWG     +G LGHGN     LP   ++  
Sbjct: 675 RIVALAERQVTGVFCGSSYSAAITAAGELYTWGRG--TYGRLGHGNSEDKHLPTIVQVLK 732

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
               IHV ++ CG  H+  VT  G ++ +GDG FG LG+G     S P  ++        
Sbjct: 733 QQRVIHV-ALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIE-------- 783

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
              C    +   V+V  GS  S      G +++WG G  GRLGHG  E    P  + AL 
Sbjct: 784 LPQC----SDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALE 839

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
             N   ++ G +  +ALT +G +Y  G   + QL  P
Sbjct: 840 GKNIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPP 876



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 156/323 (48%), Gaps = 30/323 (9%)

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I+    + V  VAC E     +T +G + +   SNC      H  + +   PK + G LE
Sbjct: 576 IELPAGVQVRQVACSETSIYILTTTGQVLSLQHSNC------HTPDTTA--PKPIEG-LE 626

Query: 339 GIHVSSVS--CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
            +++  ++  C   H   +T+ G +F++G+G  G LGHGD  S   P  + +L   +   
Sbjct: 627 SVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTG 686

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
             CG  ++AA+             ++G+L+TWG G  GRLGHG+ E + +PT V  L + 
Sbjct: 687 VFCGSSYSAAIT------------AAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQ 734

Query: 457 NFCQVS--CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEI 513
               V+  CG + ++ +T TG VY  G   +G+LG+   NG  +P  +E     +   ++
Sbjct: 735 RVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKV 794

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG----T 569
             G +    L     VY+WGKG  GRLGHG ++    P  ++AL+ K +  +  G     
Sbjct: 795 FSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCL 854

Query: 570 SFTAAICLHKWVSGVDQSMCSGC 592
           + TA+  L+ W     Q +C  C
Sbjct: 855 ALTASGELYGWGRNDFQQLCPPC 877



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 92/191 (48%), Gaps = 14/191 (7%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GKL+  G+G  GRLG G       P  V  L +    +V+   G    +ALT  G V++ 
Sbjct: 3293 GKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSW 3352

Query: 481  GSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            G    G+LG   +   + P  +E   TK  + +IACG  H A +TS  E+YTWG G  GR
Sbjct: 3353 GEGEDGKLGHGNRLTLEKPKLIETLRTKR-IRDIACGSSHSAAITSSGELYTWGLGEYGR 3411

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VDQSMC 589
            LGHGD   +  P LV AL D +V  + CG+     +CL +      W  G    + +   
Sbjct: 3412 LGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGS 3471

Query: 590  SGCRIPFNFKR 600
             GC IP   +R
Sbjct: 3472 EGCSIPHQVER 3482



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 120/256 (46%), Gaps = 28/256 (10%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  +F +G    G LG   G RI + TP E  SL  LR ++ A G     AV        
Sbjct: 4376 ASTIFGWGHNHRGQLGGLDGSRIKMPTPCEALSL--LRPIQIAGGEQTLYAVT------- 4426

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKL+  G G  GRLG G  ++   PT V +L  V      V+ G    +AL++
Sbjct: 4427 -----PDGKLYATGYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSS 4481

Query: 474  TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
             G V++ G    G+LG    +     ++   L+   V +IACG  H A +TS+  V TWG
Sbjct: 4482 DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWG 4541

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG------ 583
            KG  GRLGHGD++D+  P LVEAL   +   I CG+     +C+    + W  G      
Sbjct: 4542 KGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGK 4601

Query: 584  VDQSMCSGCRIPFNFK 599
            + +    GC++P   +
Sbjct: 4602 LGRGGSDGCKVPMKIE 4617



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 115/249 (46%), Gaps = 26/249 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GDVF WG   G G LG G   S           +P  + +     V  + CG  ++A +T
Sbjct: 649 GDVFSWGNGEG-GRLGHGDTSSKD---------IPTRIVALAERQVTGVFCGSSYSAAIT 698

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA--CGEHHTCAVTLSGDMY 307
             GE+++WG    GRLGHG   D   P ++  LK   V  VA  CG+ H+  VT +G +Y
Sbjct: 699 AAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVY 758

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG  + +FG LG+G      +P  +  P        V  G   +  +   G ++++G G
Sbjct: 759 AWG--DGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKG 816

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G LGHG     ++P+ + +L+G   V  A G+ H  A+             +SG+L+ 
Sbjct: 817 HGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALT------------ASGELYG 864

Query: 428 WGDGDRGRL 436
           WG  D  +L
Sbjct: 865 WGRNDFQQL 873


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 189/385 (49%), Gaps = 49/385 (12%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPK 277
           + + P  +E      ++ +  G   +  +T  GEV+SWG+  GG LGH   +  +++ P+
Sbjct: 69  NYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPE 128

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL---------- 327
            I+ L    ++ ++CG+ H  AVT  G++YTWG  N  FG LGH  E+            
Sbjct: 129 RIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWG--NKEFGKLGHEEELKQEQKIKIKRGN 186

Query: 328 ---------WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH-GDR 377
                     LP+K+   L  I    V+CG   T V++  G+++TFG   +G LG+  D+
Sbjct: 187 LSHDYLQDSMLPQKIE-SLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQ 245

Query: 378 ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG 437
            SV+TP+ +  L  +  V+ + G    AA+ +             GKL+TWG+   G+LG
Sbjct: 246 NSVTTPQLIKDLNDI--VKISAGYSFCAAITK------------QGKLYTWGNNRNGQLG 291

Query: 438 HGDKEARLVPTCVAALVEPN-FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANG 495
           +     +  P+ V      N    VSCG +   ALT  G +YT G    GQLG   K++ 
Sbjct: 292 NSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDL 351

Query: 496 KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG-----DTDDRNF 550
             P  VE    K  + +IACG  H A +T   ++Y +G+G+ G+LG G     +   R+ 
Sbjct: 352 YAPRHVE---FKQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRST 408

Query: 551 PSLVEALKDKQVKSIVCGTSFTAAI 575
           P+LV+  K KQV  + CG   T AI
Sbjct: 409 PNLVQYFKGKQVVDVTCGGEHTIAI 433



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 181/345 (52%), Gaps = 42/345 (12%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V+SWG    G+LG   +++   P  I+ L +  ++ V  G+  + A+T +G++Y+WG + 
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNK 110

Query: 314 CNFGLLGHGNEMSLWL--PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
              G+LGH + +S  +  P+++   L G  +  +SCG +H A VT  G+++T+G+  FG 
Sbjct: 111 G--GILGHEDRLSFNMTQPERIE-KLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGK 167

Query: 372 LGHGDRISVST-------------------PREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           LGH + +                       P++++SL  ++  + ACG+  T  + E   
Sbjct: 168 LGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSE--- 224

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                     GK++T+G    G LG+  D+ +   P  +  L   +  ++S G+S   A+
Sbjct: 225 ---------DGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDL--NDIVKISAGYSFCAAI 273

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
           T  G +YT G+   GQLG+ ++  +  P+ V G  ++N + +++CGD  +A LT + ++Y
Sbjct: 274 TKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLY 333

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           TWG G +G+LGHG+  D   P  VE  K K +K I CG S  A I
Sbjct: 334 TWGFGGDGQLGHGNKSDLYAPRHVE-FKQKIIK-IACGGSHAAFI 376



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 13/183 (7%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVAC 292
           D+  I+ G    A +TKQG++++WG    G+LG+      + P ++    + N +  V+C
Sbjct: 259 DIVKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSC 318

Query: 293 GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           G++   A+T  G +YTWG G +   G LGHGN+  L+ P+ +    +   +  ++CG  H
Sbjct: 319 GDNFIAALTQQGQLYTWGFGGD---GQLGHGNKSDLYAPRHVEFKQK---IIKIACGGSH 372

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISV-----STPREVDSLKGLRTVRAACGVWHTAA 406
            A +T   QL+ FG G+ G LG G  ++      STP  V   KG + V   CG  HT A
Sbjct: 373 AAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIA 432

Query: 407 VVE 409
           + +
Sbjct: 433 ITQ 435



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           + +++CG    A +T+QG++++WG    G+LGHG  SD+  P+ ++  + I    +ACG 
Sbjct: 313 IVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQKIIK--IACGG 370

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGH-GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
            H   +T    +Y +G GS    G+  +  +E S+     L    +G  V  V+CG  HT
Sbjct: 371 SHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHT 430

Query: 353 AVVTSAGQ 360
             +T   Q
Sbjct: 431 IAITQEFQ 438


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/373 (34%), Positives = 190/373 (50%), Gaps = 27/373 (7%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +  GG+  S     VK+  F P    +   L   +IA G +   +V+  
Sbjct: 3059 VFVWGLNDKDQL--GGVKGSK----VKVPVFSP----ALSALRPVHIAGGSKTLFIVSHD 3108

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTW 309
            G++F+ GE   GRLG G  ++VS P+    L ++ V  VA   G  H  A+T  G +Y+W
Sbjct: 3109 GKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSW 3168

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            G      G LGHGN ++L  P+ +   L G  V S++CG  H+A VT+ G L+T+G G +
Sbjct: 3169 GEGE--DGKLGHGNRITLEAPRLIES-LAGERVISIACGSAHSACVTARGHLYTWGLGEY 3225

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHGD      P+ V++L   R ++ ACG             + + +  + GK+F+WG
Sbjct: 3226 GRLGHGDDNIQLVPKMVEALANYRVIQVACG----------SRDAQTLALTACGKVFSWG 3275

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            DGD G+LG G  +   +P  V  L      QV CG   ++ALT  G V+T G   Y +LG
Sbjct: 3276 DGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLG 3335

Query: 490  DP-KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
                A+ + PT VE  L    V  +A G  H   +TS  +V+ WG   +G+ G+G T   
Sbjct: 3336 HGCDAHVRRPTLVEA-LRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGNGTTCVN 3394

Query: 549  NFPSLVEALKDKQ 561
              P+LV  ++  Q
Sbjct: 3395 RRPALVAGVEGVQ 3407



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 174/333 (52%), Gaps = 31/333 (9%)

Query: 253  EVFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            +VF WG    ++LGG  G  V   V  P L  AL+ ++   +A G      V+  G ++ 
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSPAL-SALRPVH---IAGGSKTLFIVSHDGKLFA 3113

Query: 309  WG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G G+N   G LGH N +S     + N  L  + V  V+   G  H   +T+ G+++++G
Sbjct: 3114 CGEGTNGRLG-LGHSNNVST---PRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWG 3169

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+RI++  PR ++SL G R +  ACG  H+A V             + G L
Sbjct: 3170 EGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVT------------ARGHL 3217

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +LVP  V AL      QV+CG   + T+ALT  G V++ G  
Sbjct: 3218 YTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDG 3277

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   ++G  +P  VE +L    V ++ CG      LT   EV+TWGKG   RLGH
Sbjct: 3278 DFGKLGRGGSDGCAIPMNVE-RLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGH 3336

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P+LVEAL+ ++V  +  G     A+
Sbjct: 3337 GCDAHVRRPTLVEALRGRRVIHVAVGALHCLAV 3369



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 179/372 (48%), Gaps = 22/372 (5%)

Query: 200  GDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 258
            G  + G G +  G   GV+      P    +   L+   +  G +    VT  G+V++ G
Sbjct: 3950 GCAVYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATG 4009

Query: 259  EELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNF 316
               GGRLG G    VS P L+ +++++ +  VAC  G  H  A++  G++Y+WG      
Sbjct: 4010 YGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGE--D 4067

Query: 317  GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
            G LGHGN +S   PK +   L G+ V  ++CG  H+A +T+ G+++T+G G +G LGHGD
Sbjct: 4068 GKLGHGNRVSYDRPKLITA-LSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGD 4126

Query: 377  RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRG 434
                  P+ V++L   R +  ACG               + + C      +++WGDGD G
Sbjct: 4127 SEDQLIPKLVEALSSFRVIDVACG------------SGDAQTLCITDDDNVWSWGDGDYG 4174

Query: 435  RLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKA 493
            +LG G  E   +P  +  L      +V CG   +VAL   G VYT G   Y +LG     
Sbjct: 4175 KLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYE 4234

Query: 494  NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL 553
            + + P RV G   K  V  IA G  H    T   EVYTWG    G+LG G T     P L
Sbjct: 4235 HVRRPMRVTGMQGKMIV-SIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRL 4293

Query: 554  VEALKDKQVKSI 565
            + AL+   + ++
Sbjct: 4294 LMALQVNIIPTL 4305



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 159/326 (48%), Gaps = 21/326 (6%)

Query: 254  VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
            V+ WG    G+LG    + V  P    AL  +N   +  GE    AVT  G +Y  G   
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGA 4012

Query: 314  CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTFGV 371
                 +G  + +S      L   ++ + ++ V+C  G  H   +++ G+++++G+G  G 
Sbjct: 4013 GGRLGIGGIDSVS---QPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGK 4069

Query: 372  LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
            LGHG+R+S   P+ + +L GL  V  ACG  H+A +             + G+++TWG G
Sbjct: 4070 LGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLT------------ARGRIYTWGKG 4117

Query: 432  DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLG 489
              GRLGHGD E +L+P  V AL       V+CG   + T+ +T   +V++ G   YG+LG
Sbjct: 4118 RYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4177

Query: 490  DPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
               + G KLP R++  L    V ++ CG      L     VYTWGKG   RLGHG  +  
Sbjct: 4178 RGGSEGCKLPMRIDC-LKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHV 4236

Query: 549  NFPSLVEALKDKQVKSIVCGTSFTAA 574
              P  V  ++ K + SI  G+    A
Sbjct: 4237 RRPMRVTGMQGKMIVSIATGSLHCVA 4262



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 150/303 (49%), Gaps = 25/303 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G +F  GE T +G LG G   S + +  + + ++     S V++    +  GG+HA  +T
Sbjct: 3109 GKLFACGEGT-NGRLGLG--HSNNVSTPRANPYL-----SHVLVRRVAVHSGGKHALALT 3160

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G+V+SWGE   G+LGHG    +  P+LI++L    V  +ACG  H+  VT  G +YTW
Sbjct: 3161 ADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTW 3220

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDG 367
            G     +G LGHG++    +PK +   L    V  V+CG     T  +T+ G++F++GDG
Sbjct: 3221 GLG--EYGRLGHGDDNIQLVPKMVEA-LANYRVIQVACGSRDAQTLALTACGKVFSWGDG 3277

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             FG LG G     + P  V+ L  L   +  CG   + A+               G+++T
Sbjct: 3278 DFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTR------------DGEVWT 3325

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WG GD  RLGHG       PT V AL       V+ G    +A+T+   V+  G   +GQ
Sbjct: 3326 WGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQ 3385

Query: 488  LGD 490
             G+
Sbjct: 3386 QGN 3388



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 130/264 (49%), Gaps = 23/264 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG G         V  D   PK + +   L+V  IACGG H+A +T
Sbjct: 4057 GEVYSWGE-GEDGKLGHGNR-------VSYDR--PKLITALSGLEVVCIACGGAHSACLT 4106

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             +G +++WG+   GRLGHG   D   PKL++AL +  V  VACG      + ++ D   W
Sbjct: 4107 ARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVW 4166

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
               + ++G LG G      LP +++  L+G+ V  V CG   +  +   G ++T+G G +
Sbjct: 4167 SWGDGDYGKLGRGGSEGCKLPMRIDC-LKGLRVIKVECGSQFSVALCQCGSVYTWGKGDY 4225

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
              LGHG    V  P  V  ++G   V  A G  H  A  +            +G+++TWG
Sbjct: 4226 HRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTD------------TGEVYTWG 4273

Query: 430  DGDRGRLGHGDKEARLVPTCVAAL 453
            D D G+LG G   A   P  + AL
Sbjct: 4274 DNDEGQLGDGTTLAAQRPRLLMAL 4297



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 133/266 (50%), Gaps = 27/266 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+ WGE   DG LG          G ++    P+ +ES     V +IACG  H+A VT
Sbjct: 3163 GKVYSWGE-GEDGKLG---------HGNRITLEAPRLIESLAGERVISIACGSAHSACVT 3212

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
             +G +++WG    GRLGHG D+    PK+++AL N  V  VACG  +  T A+T  G ++
Sbjct: 3213 ARGHLYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVF 3272

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G      +P  +   L  + V+ V CG   +  +T  G+++T+G G
Sbjct: 3273 SWG--DGDFGKLGRGGSDGCAIPMNVER-LNSLGVTQVECGAQFSLALTRDGEVWTWGKG 3329

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  P  V++L+G R +  A G  H  AV             S  +++ 
Sbjct: 3330 DYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVT------------SENQVWA 3377

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAAL 453
            WGD D G+ G+G       P  VA +
Sbjct: 3378 WGDNDHGQQGNGTTCVNRRPALVAGV 3403



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 20/228 (8%)

Query: 355  VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
            VT  G+++  G G  G LG G   SVS P  + S++ +   + AC              +
Sbjct: 3999 VTPDGKVYATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVAC--------------N 4044

Query: 415  SSSSNC----SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
            S   +C    + G++++WG+G+ G+LGHG++ +   P  + AL       ++CG + +  
Sbjct: 4045 SGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSAC 4104

Query: 471  LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTE 528
            LT  G +YT G   YG+LG   +  +L  ++   L+   V ++ACG  D     +T    
Sbjct: 4105 LTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDN 4164

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
            V++WG G  G+LG G ++    P  ++ LK  +V  + CG+ F+ A+C
Sbjct: 4165 VWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALC 4212



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 127/305 (41%), Gaps = 54/305 (17%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP----- 336
           L +I ++ +AC E     +T  G +YT                    LP     P     
Sbjct: 480 LGSIRIQQIACAEKLALLLTHDGAVYT--------------------LPYDTMTPHLVPG 519

Query: 337 LEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
           LE   ++ VSC     H    +S G  +++G G  G LGHGD  +   P+ +  L     
Sbjct: 520 LESKTITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEV 579

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV---A 451
           VR A G+  +A +             S G L+TWG G +GRLGHG  E  L P  V   A
Sbjct: 580 VRVAAGLACSAVIT------------SRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNA 627

Query: 452 ALVEPNF-CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFV 510
             +E      +  G   T+  T  G V   G    G+ G P+A           L    V
Sbjct: 628 HNIERIIDVALGWGEGSTLCCTWEGAVQVFGE---GEAGTPRA--------LSALAMFRV 676

Query: 511 EEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
             +  G++  A LT   +VYTWGKG   RLGHG+ +    P LVEAL+  ++  +  G S
Sbjct: 677 TRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGAS 736

Query: 571 FTAAI 575
              A+
Sbjct: 737 HGIAL 741



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 124/287 (43%), Gaps = 34/287 (11%)

Query: 212 GSYAGVKMDSFVPKAVESAVVLDVQNIACG--GRHAALVTKQGEVFSWGEELGGRLGHGV 269
           G+   +  D+  P  V       +  ++C   GRH    +  G  +SWG    GRLGHG 
Sbjct: 502 GAVYTLPYDTMTPHLVPGLESKTITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGD 561

Query: 270 DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLW 328
            +    P+ +  L +  V  VA G   +  +T  G +YTWG G+    G LGHG   +  
Sbjct: 562 TAARDAPQPLHHLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQ---GRLGHGTIENCL 618

Query: 329 LPKKLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPRE 385
            P+ ++     +E I   ++  G   T   T  G +  FG+G  G           TPR 
Sbjct: 619 TPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGEAG-----------TPRA 667

Query: 386 VDSLKGLRTVRAACGV-WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR 444
           + +L   R  R   G  WH A                 G+++TWG GD  RLGHG+ E+ 
Sbjct: 668 LSALAMFRVTRVYTGEHWHAALT-------------DGGQVYTWGKGDGYRLGHGNMEST 714

Query: 445 LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
            +P  V AL       +S G S  +AL++ G ++  G+    Q+ +P
Sbjct: 715 KIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHERTQISNP 761



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 111/257 (43%), Gaps = 32/257 (12%)

Query: 360  QLFTFG----DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            ++F +G    D   GV G   ++ V +P    +L  LR V  A G   T  +V       
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSP----ALSALRPVHIAGGS-KTLFIVS------ 3106

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKLF  G+G  GRLG G       P     L  V      V  G    +ALT 
Sbjct: 3107 -----HDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTA 3161

Query: 474  TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
             G VY+ G    G+LG          R+   L    V  IACG  H A +T+R  +YTWG
Sbjct: 3162 DGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWG 3221

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT------SFTAAICLHKWVSG---- 583
             G  GRLGHGD + +  P +VEAL + +V  + CG+      + TA   +  W  G    
Sbjct: 3222 LGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGK 3281

Query: 584  VDQSMCSGCRIPFNFKR 600
            + +    GC IP N +R
Sbjct: 3282 LGRGGSDGCAIPMNVER 3298



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 91/188 (48%), Gaps = 17/188 (9%)

Query: 447  PTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGK 504
            PT +A++      +V+C  G    +AL+  G VY+ G    G+LG          ++   
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITA 4086

Query: 505  LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKS 564
            L+   V  IACG  H A LT+R  +YTWGKG  GRLGHGD++D+  P LVEAL   +V  
Sbjct: 4087 LSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVID 4146

Query: 565  IVCGTSFTAAICL----HKWVSG------VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCH 614
            + CG+     +C+    + W  G      + +    GC++P      R +C     V   
Sbjct: 4147 VACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPM-----RIDCLKGLRVIKV 4201

Query: 615  TCSSKKSV 622
             C S+ SV
Sbjct: 4202 ECGSQFSV 4209


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/411 (30%), Positives = 198/411 (48%), Gaps = 31/411 (7%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            + G G +  G   G++ +    P+  ES   L+   I  G +    VT  G+V++ G   
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYAA 3895

Query: 262  GGRLGHGVDSDVSHPKLIDAL--KNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNF 316
             GRLG G   +V+ P  + +L  + I V+ +A   G  H  AVT  G++Y WG G +   
Sbjct: 3896 HGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGED--- 3952

Query: 317  GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
            G LG G  +++ +P  +   L+  HV    CG  H+A +T  G L+T+G G +G LGH D
Sbjct: 3953 GKLGLGTTVNMNVPHLIES-LKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHND 4011

Query: 377  RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS--SGKLFTWGDGDRG 434
              +   P+ V +LKG +    ACG               + + C+  SG +F+WGDGD G
Sbjct: 4012 HETQHKPKLVSALKGEQVTCVACG------------SGDAQTLCATASGCVFSWGDGDYG 4059

Query: 435  RLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKA 493
            +LG G  E   VP  + +L   +  ++ CG   ++ALTT GHVYT G   Y +LG    +
Sbjct: 4060 KLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDS 4119

Query: 494  NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL 553
            + + P RV G L    V +I CG  H  V T   +V++WG    G++G+  T   + P  
Sbjct: 4120 HQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPKR 4179

Query: 554  VEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCS-GCRIPFNFKRKRH 603
            +    +  +  + CG++ + A     W S      C    ++P  F   +H
Sbjct: 4180 INITDNICIDHVACGSAHSIA-----WSSKQRNLSCPLPAKVPMEFNHLQH 4225



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/345 (34%), Positives = 176/345 (51%), Gaps = 24/345 (6%)

Query: 237  NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA--CGE 294
              A G + + +V+  G+VF+ GE   GRLG G  +++  P  I +L    V  VA  C  
Sbjct: 2962 QFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAG 3021

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
             H  AVT  G +++WG  +  +G LGHG+  S   PK +    +  H+  VSCG  H+A 
Sbjct: 3022 RHVLAVTADGKVFSWG--DGQYGQLGHGSLQSYDRPKMIE-IFQAKHIREVSCGTGHSAA 3078

Query: 355  VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
            V+  G+LFT+G G  G LGHGD  + + P+ V +L+ +R    ACG             S
Sbjct: 3079 VSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACG-------------S 3125

Query: 415  SSSSNCSSGK--LFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVAL 471
             ++   ++G   L+ WGDG  G+LG  D  +   VP  V      N  Q+ CG   +V L
Sbjct: 3126 RNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVPVQVITF-PSNIIQIECGMHFSVLL 3184

Query: 472  TTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
            T  G VYT G   Y +LG D  +   +PT V+G  +K  + ++A G  H   LTS  EVY
Sbjct: 3185 TKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKT-ITQVAVGALHCLALTSSGEVY 3243

Query: 531  TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +WG   +G+ G+  T     P +V +LK  ++  I CG+S + A 
Sbjct: 3244 SWGDNEHGQQGNNSTICNRKPQIVASLKGHRICKIACGSSHSIAF 3288



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 170/336 (50%), Gaps = 34/336 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIA--CGGRHAAL 247
            G VF  GE +  G LG      G +A ++M    P  + S  +  V+ +A  C GRH   
Sbjct: 2977 GKVFACGEGSS-GRLG-----IGGFANIRM----PHQISSLSMYVVRKVAVSCAGRHVLA 3026

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G+VFSWG+   G+LGHG       PK+I+  +  ++  V+CG  H+ AV+++G+++
Sbjct: 3027 VTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELF 3086

Query: 308  TWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ--LFTF 364
            TWG G++   G LGHG+  +   PK +   LE + +S V+CG    A   +AG   L+ +
Sbjct: 3087 TWGQGAD---GRLGHGDSNNQTKPKLVRA-LEKVRISCVACGS-RNAHTLAAGDNSLWAW 3141

Query: 365  GDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            GDG+FG LG  D   S   P +V +      ++  CG+  +  + +             G
Sbjct: 3142 GDGSFGKLGLKDGSSSTDVPVQVITFPS-NIIQIECGMHFSVLLTK------------EG 3188

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            K++TWG G+  RLG+     + +PT V  L      QV+ G    +ALT++G VY+ G  
Sbjct: 3189 KVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDN 3248

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
             +GQ G+         ++   L  + + +IACG  H
Sbjct: 3249 EHGQQGNNSTICNRKPQIVASLKGHRICKIACGSSH 3284



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 120/228 (52%), Gaps = 15/228 (6%)

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           H   +T  G+++++G G+ GVLG G+  S + P  V +L G R V  + G  H+AAV E 
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTE- 577

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLT 468
                       G L+TWG G  GRLGHG+ E +L+PT V  L      QV CG   + T
Sbjct: 578 -----------DGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHT 626

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           +AL  TG V++ G   YG+LG P ++  K+P  + G  + + V +I CG+     LT   
Sbjct: 627 LALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDG 686

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           ++Y+WG G   +LGHG+ +    P L+E L +  V  +  G     A+
Sbjct: 687 KLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVAL 734



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 148/283 (52%), Gaps = 23/283 (8%)

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           +H  A+T  G +Y+WG GSN   G+LG GN  S   P  +   L G  +  +S G  H+A
Sbjct: 518 NHILALTKDGKVYSWGQGSN---GVLGIGNTESQTAPTAV-AALSGDRIVHISAGSMHSA 573

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVM 411
            VT  G L+T+G G++G LGHG+      P  V+ L G++ V+  CG    HT A+ +  
Sbjct: 574 AVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDD-- 631

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN-FCQVSCGHSLTVA 470
                     +G++++WGDGD G+LG    +   VP  ++ +   +   ++ CG+ +++A
Sbjct: 632 ----------TGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMA 681

Query: 471 LTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           LT  G +Y+ G     QLG   + + + P  +EG L++  V +++ G  H   LT+ ++V
Sbjct: 682 LTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEG-LSETVVSDVSVGAQHCVALTTDSDV 740

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           Y WGK ++  +     D  + P ++EA   K    I CG S T
Sbjct: 741 YAWGKNSSFEVNESG-DIISSPLMIEAASGKGALLIACGASET 782



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 166/361 (45%), Gaps = 33/361 (9%)

Query: 227  VESAVVLDVQNIACGGRHAALVTKQ--GEVFSWGEELGGRLGHGVDSDVSHPKL---IDA 281
            V+ A+  D  N+    R   L T     +VF WG     +LG    +D+S  K+   I++
Sbjct: 2897 VDDALDDDTNNMYSRRRLDLLSTDTHGNKVFVWGLNDMRQLG----TDLSEAKVKSPIES 2952

Query: 282  LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEGI 340
                 +  +       C+  +S D   +     + G LG G   ++ +P +++   +  +
Sbjct: 2953 RTLARLHPIQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVV 3012

Query: 341  HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
               +VSC   H   VT+ G++F++GDG +G LGHG   S   P+ ++  +       +CG
Sbjct: 3013 RKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCG 3072

Query: 401  VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
              H+AAV              +G+LFTWG G  GRLGHGD   +  P  V AL +     
Sbjct: 3073 TGHSAAV------------SVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISC 3120

Query: 461  VSCG----HSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIA 514
            V+CG    H+L         ++  G   +G+LG  D  ++  +P +V      N ++ I 
Sbjct: 3121 VACGSRNAHTLAAG---DNSLWAWGDGSFGKLGLKDGSSSTDVPVQVI-TFPSNIIQ-IE 3175

Query: 515  CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            CG +   +LT   +VYTWGKG   RLG+  T  +  P+LV+ L  K +  +  G     A
Sbjct: 3176 CGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLA 3235

Query: 575  I 575
            +
Sbjct: 3236 L 3236



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 120/243 (49%), Gaps = 18/243 (7%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G H   +TK G+V+SWG+   G LG G     + P  + AL    +  ++ G  H+ AVT
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVT 576

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAG 359
             G +YTWG    ++G LGHGN     +P  + G L G+ +  V CG    HT  +   G
Sbjct: 577 EDGVLYTWGKG--SYGRLGHGNAEDKLIPTIVEG-LNGVKIVQVDCGSGDAHTLALDDTG 633

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
           Q++++GDG +G LG         P+ +             G+  T+ VV+++ G+  S  
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPIS------------GIGSTSPVVKIICGNQISMA 681

Query: 420 CS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
            +  GKL++WG GD  +LGHG++E    P  +  L E     VS G    VALTT   VY
Sbjct: 682 LTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVY 741

Query: 479 TMG 481
             G
Sbjct: 742 AWG 744



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 9/169 (5%)

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           GK+++WG G  G LG G+ E++  PT VAAL       +S G   + A+T  G +YT G 
Sbjct: 527 GKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGK 586

Query: 483 PVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGR 539
             YG+LG   A  KL PT VEG L    + ++ C  GD H   L    +V++WG G  G+
Sbjct: 587 GSYGRLGHGNAEDKLIPTIVEG-LNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGK 645

Query: 540 LGHGDTDDRNFPSLVEAL-KDKQVKSIVCGTSFTAAIC----LHKWVSG 583
           LG   +D    P  +  +     V  I+CG   + A+     L+ W  G
Sbjct: 646 LGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCG 694



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 110/220 (50%), Gaps = 14/220 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG+ + +G+LG G   S +          P AV +     + +I+ G  H+A VT
Sbjct: 527 GKVYSWGQGS-NGVLGIGNTESQT---------APTAVAALSGDRIVHISAGSMHSAAVT 576

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
           + G +++WG+   GRLGHG   D   P +++ L  + +  V C  G+ HT A+  +G ++
Sbjct: 577 EDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVW 636

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LG        +PK ++G      V  + CG   +  +T  G+L+++G G
Sbjct: 637 SWG--DGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCG 694

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
               LGHG++  V  P+ ++ L        + G  H  A+
Sbjct: 695 DTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVAL 734



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 26/243 (10%)

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
            S++    K+F WG  D  +LG    EA++  P     L   +  Q + G   +  ++  G
Sbjct: 2918 STDTHGNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDG 2977

Query: 476  HVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIA--CGDYHVAVLTSRTEVYTW 532
             V+  G    G+LG    AN ++P ++   L+   V ++A  C   HV  +T+  +V++W
Sbjct: 2978 KVFACGEGSSGRLGIGGFANIRMPHQI-SSLSMYVVRKVAVSCAGRHVLAVTADGKVFSW 3036

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSM 588
            G G  G+LGHG     + P ++E  + K ++ + CGT  +AA+     L  W  G D  +
Sbjct: 3037 GDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRL 3096

Query: 589  CSG-------CRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCF 641
              G        ++    ++ R +C  CG    HT          +A   N  +   D  F
Sbjct: 3097 GHGDSNNQTKPKLVRALEKVRISCVACGSRNAHT----------LAAGDNSLWAWGDGSF 3146

Query: 642  GKL 644
            GKL
Sbjct: 3147 GKL 3149



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 12/141 (8%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVES-AVVLDVQNIACGGRHA 245
           D  G V+ WG+  GD    G + R GS       + VPK +        V  I CG + +
Sbjct: 630 DDTGQVWSWGD--GDY---GKLGRPGSD-----QNKVPKPISGIGSTSPVVKIICGNQIS 679

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
             +TK G+++SWG     +LGHG    V  PKLI+ L    V  V+ G  H  A+T   D
Sbjct: 680 MALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSD 739

Query: 306 MYTWGGSNCNFGLLGHGNEMS 326
           +Y W G N +F +   G+ +S
Sbjct: 740 VYAW-GKNSSFEVNESGDIIS 759



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 9/82 (10%)

Query: 511 EEIACGDY-----HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
           EEI   D+     H+  LT   +VY+WG+G+NG LG G+T+ +  P+ V AL   ++  I
Sbjct: 506 EEIIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHI 565

Query: 566 VCGTSFTAAI----CLHKWVSG 583
             G+  +AA+     L+ W  G
Sbjct: 566 SAGSMHSAAVTEDGVLYTWGKG 587


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 195/392 (49%), Gaps = 29/392 (7%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            DS   V++WG     G LGG         G K+    P   E+   L    I  G +   
Sbjct: 2590 DSEYAVYVWG-LNDKGQLGG-------LNGSKVKR--PTFNEALTALKPIEIVGGSKSLF 2639

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSG 304
            +V+ +G+VF  G+  GGRLG      VS P+ I  L    ++ VA   G  H  A++L G
Sbjct: 2640 IVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDG 2699

Query: 305  DMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
             + +WG G +   G LGHG+ ++L  PK ++  L    V  ++CG  H+A +TS G+L+T
Sbjct: 2700 KVLSWGDGED---GKLGHGDILTLDTPKLIDSLLAK-RVFYIACGSAHSAAITSDGELYT 2755

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            +G G +G LGH D +S  TP+ V    G    + ACG             + + +  S G
Sbjct: 2756 WGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACG----------SRDAQTLALDSEG 2805

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
             +++WGDGD G+LG G  +    P  V  LV     Q+ CG   +VALT TG V+T G  
Sbjct: 2806 NVYSWGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKG 2865

Query: 484  VYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             Y +LG  +  + + PT V  +L    ++ IA G  H   ++++ +VY WG   +G+ G+
Sbjct: 2866 EYYRLGLGRGEHVRRPTLV-NQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGN 2924

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G T+    P LV    + ++  + CG+S + A
Sbjct: 2925 GTTNANQEPRLVTNFNNIKINRVGCGSSQSIA 2956



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 172/358 (48%), Gaps = 23/358 (6%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG----VDSDVSHPKLI 279
            P A +S  VL    +  G +    VT  G+V++ G    GRLG G     +  V  P+L+
Sbjct: 3568 PLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLV 3627

Query: 280  DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
              L NI    V  G  H  A++ +G++Y WG  +   G LG GN ++   P+ L   L  
Sbjct: 3628 QGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDD--GKLGLGNRVTHSKPQ-LVQSLSD 3684

Query: 340  IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
              +  ++CG +H+A ++  G L+T+G G +G LGHGD      P+ V  L     V+ AC
Sbjct: 3685 KCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVAC 3744

Query: 400  GVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
            G               + + C  S   +++WGDGD G+LGH   E+  +P  + +L    
Sbjct: 3745 G------------SGDAQTMCVTSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKG 3792

Query: 458  FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACG 516
              Q+ CG   +VAL+  G +YT G   Y +LG     + + P  V G   K  V+  + G
Sbjct: 3793 IIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQ-FSTG 3851

Query: 517  DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              HV  LT   EVY WG    G+LG G       P  + ALK K+++ + CG++ + A
Sbjct: 3852 SLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSFA 3909



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 164/332 (49%), Gaps = 19/332 (5%)

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            V  +  V+ WG    G+LG    S V  P   +AL  +    +  G      V+  G ++
Sbjct: 2589 VDSEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSLFIVSNEGKVF 2648

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG-IHVSSVSCGPWHTAVVTSAGQLFTFGD 366
              G S+   G LG      +  P+++ G  +  I   +V  G  H   ++  G++ ++GD
Sbjct: 2649 VCGDSSG--GRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGD 2706

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G  G LGHGD +++ TP+ +DSL   R    ACG  H+AA+             S G+L+
Sbjct: 2707 GEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAIT------------SDGELY 2754

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
            TWG G  GRLGH D+ ++  P  V   V  N  QV+CG   + T+AL + G+VY+ G   
Sbjct: 2755 TWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGD 2814

Query: 485  YGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            +G+LG   ++G   P +VE +L  + V +I CG      LT+  +V+TWGKG   RLG G
Sbjct: 2815 FGKLGRGGSDGCCTPQKVE-RLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLG 2873

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              +    P+LV  LK   +  I  GT    A+
Sbjct: 2874 RGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAV 2905



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 144/283 (50%), Gaps = 27/283 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WG+   DG LG G   + S          P+ V+S     + +IACGG H+A ++
Sbjct: 3652 GEVYAWGD-GDDGKLGLGNRVTHSK---------PQLVQSLSDKCIIDIACGGFHSAAIS 3701

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
            + G +++WG+   GRLGHG   D  +PKL+  L N +V  VAC  G+  T  VT   +++
Sbjct: 3702 RYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVW 3761

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG    ++G LGH    S  LP K+   L G  +  + CG   +  +++ G L+T+G G
Sbjct: 3762 SWGDG--DYGKLGHNISESCKLPCKIES-LSGKGIIQIDCGSQFSVALSANGTLYTWGKG 3818

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  P+ V  L+G + V+ + G  H  A+ +             G+++ 
Sbjct: 3819 DYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTD------------DGEVYA 3866

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
            WGD D G+LG G       P  +AAL      QVSCG + + A
Sbjct: 3867 WGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSFA 3909



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 163/329 (49%), Gaps = 23/329 (6%)

Query: 254  VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
            V+ WG    G+L     S V  P   D+L  +    V  GE    AVT  G +Y  G + 
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTE 3605

Query: 314  CNFGLLGHG--NEMSLWL--PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
               G LG G  N  + ++  P+ + G L  I   +V+ G  H   +++ G+++ +GDG  
Sbjct: 3606 S--GRLGIGPYNPKNPYVVTPQLVQG-LNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDD 3662

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LG G+R++ S P+ V SL     +  ACG +H+AA+               G L+TWG
Sbjct: 3663 GKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRY------------GHLYTWG 3710

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGHGD E  L P  V  L+  +  +V+CG   + T+ +T+  +V++ G   YG+
Sbjct: 3711 KGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGK 3770

Query: 488  LG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG +   + KLP ++E    K  ++ I CG      L++   +YTWGKG   RLGHG ++
Sbjct: 3771 LGHNISESCKLPCKIESLSGKGIIQ-IDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSE 3829

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                P  V  L+ K++     G+    A+
Sbjct: 3830 HVRKPKPVSGLQGKKIVQFSTGSLHVLAL 3858



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 132/293 (45%), Gaps = 29/293 (9%)

Query: 308  TWGGSNCNFGLLGHGN--EMSLWLPKKLNGPLEGIHVS-----SVSCGPWHTAVVTSAGQ 360
            TWGG+     + GH +  +++     ++  PL    +S      V  G      VTS G+
Sbjct: 3538 TWGGNGQVVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGK 3597

Query: 361  LFTFGDGTFGVLGHG----DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            ++  G    G LG G        V TP+ V  L  +  V    G  H  A+         
Sbjct: 3598 VYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLAL--------- 3648

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                ++G+++ WGDGD G+LG G++     P  V +L +     ++CG   + A++  GH
Sbjct: 3649 ---STTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYGH 3705

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGK 534
            +YT G   YG+LG       L  ++   L    V ++ACG  D     +TS   V++WG 
Sbjct: 3706 LYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGD 3765

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 583
            G  G+LGH  ++    P  +E+L  K +  I CG+ F+ A+     L+ W  G
Sbjct: 3766 GDYGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKG 3818



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 136/304 (44%), Gaps = 42/304 (13%)

Query: 277 KLIDALKNINVELVACGEHHTCAVTLSGDMY--TWGGSNCNFGLLGHGNEMSLWLPKKLN 334
           K+I  L+ ++VE V C  +    VT SG ++  ++   + NF       +M       +N
Sbjct: 443 KVILTLERLHVESVVCSRNEILVVTTSGTLHFISYSIDSLNF----EEKQM-------MN 491

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLR 393
            P++ + V   +        VT  G+++++G   FG LGHG + S   TP  + +   L 
Sbjct: 492 VPMKSVDVYDET-----YLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLI 546

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
            V  +CG    AAV E             GKL+ WG     ++ H        P  V ++
Sbjct: 547 VVMVSCGKDFCAAVTE------------DGKLYMWG-----KILHSSN-CCYTPELVKSI 588

Query: 454 VEPNFCQVSCGHSL--TVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE 511
            E +  +VSCG S+  T+AL+  G+V++       +  D K+   +P+ +        + 
Sbjct: 589 SEWHVSKVSCGSSINNTLALSREGYVFSFEYRNSDRGCDDKSLNVIPSMIVFDYE---IV 645

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            I C +   AV+     V+TWG+G N  LGH ++   N P  V+ L  KQV S+     +
Sbjct: 646 SIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDY 705

Query: 572 TAAI 575
             A+
Sbjct: 706 ILAL 709



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 143/351 (40%), Gaps = 46/351 (13%)

Query: 222 FVPKAVESAVV----LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           F P+  +  ++    L V+++ C      +VT  G +          + + +DS     K
Sbjct: 436 FYPETKKKVILTLERLHVESVVCSRNEILVVTTSGTL--------HFISYSIDSLNFEEK 487

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL 337
               + N+ ++ V   +    AVT  G++Y+WG +   FG LGHG + S +   +     
Sbjct: 488 ---QMMNVPMKSVDVYDETYLAVTQKGEVYSWGVNE--FGALGHGQKYSSFPTPEPIVAF 542

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
             + V  VSCG    A VT  G+L+ +G      + H       TP  V S+      + 
Sbjct: 543 SKLIVVMVSCGKDFCAAVTEDGKLYMWGK-----ILHSSN-CCYTPELVKSISEWHVSKV 596

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           +CG    +++   +  S      S    F + + DRG     DK   ++P+ +  + +  
Sbjct: 597 SCG----SSINNTLALSREGYVFS----FEYRNSDRG---CDDKSLNVIPSMI--VFDYE 643

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACG 516
              + C + +   +    +V+T G      LG   +     P  V+  L+   V  ++  
Sbjct: 644 IVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNRPKEVKF-LSGKQVTSLSLA 702

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
           D ++  LT   +VY WG+         D ++      V+ L ++QVK I C
Sbjct: 703 DDYILALTDTGQVYCWGQ--------LDNENTTQCRPVKCLMNRQVKKIAC 745



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 39/247 (15%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           G+V+ WG     G LG          G K  SF  P+ + +   L V  ++CG    A V
Sbjct: 511 GEVYSWG-VNEFGALG---------HGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAV 560

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDM 306
           T+ G+++ WG+ L     H  +   + P+L+ ++   +V  V+CG   ++T A++  G +
Sbjct: 561 TEDGKLYMWGKIL-----HSSNCCYT-PELVKSISEWHVSKVSCGSSINNTLALSREGYV 614

Query: 307 YTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +++   N + G     ++ SL  +P  +    E   + S+ C     AV+  A  +FT+G
Sbjct: 615 FSFEYRNSDRGC----DDKSLNVIPSMIVFDYE---IVSIYCHNDVNAVIDCANNVFTWG 667

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            G   +LGH +   V+ P+EV  L G +    +    +  A+ +            +G++
Sbjct: 668 RGNNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTD------------TGQV 715

Query: 426 FTWGDGD 432
           + WG  D
Sbjct: 716 YCWGQLD 722



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 37/170 (21%)

Query: 141  GSVNSLSSGGSDG---------RTGH--LKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSL 189
            G    L  GGSDG           GH  ++   G  F V+L++                 
Sbjct: 2813 GDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTAT---------------- 2856

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+ WG+        G  +R G   G  +    P  V    ++ + +IA G  H   V+
Sbjct: 2857 GQVWTWGK--------GEYYRLGLGRGEHVRR--PTLVNQLKLVTIDHIAVGTLHCIAVS 2906

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA 299
             QG+V+ WG+   G+ G+G  +    P+L+    NI +  V CG   + A
Sbjct: 2907 TQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNFNNIKINRVGCGSSQSIA 2956



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           +A+T  G VY+ G   +G LG  +     PT       +K  V  ++CG    A +T   
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDG 564

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK 579
           ++Y WGK  +       ++    P LV+++ +  V  + CG+S    + L +
Sbjct: 565 KLYMWGKILHS------SNCCYTPELVKSISEWHVSKVSCGSSINNTLALSR 610


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/331 (35%), Positives = 172/331 (51%), Gaps = 19/331 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           +   PKA+ +     ++++ CG  +  A+   +G+V+SWG    GRLGHG  +DV  P+ 
Sbjct: 52  ECLAPKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRP 111

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPL 337
           I+      V  VACG+ HT  V   G+++T+G   N   GL GH N+    L  +L   L
Sbjct: 112 IEFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGL-GHTNDC---LSPQLVVAL 167

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           +G  V SV+CG  H+   T +G +F++G G +G LG G+      P  V  L+G+R V A
Sbjct: 168 QGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSA 227

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
            CG  H+A V E             G++FT+G    G+LGHGD   R VP  VAAL    
Sbjct: 228 ECGWRHSAVVSE------------DGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTR 275

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACG 516
              V+ G   T+A  ++G++Y  G   +GQLG   ++ +  P  V G L    V  + CG
Sbjct: 276 ISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCG 335

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
             H   +T    VY+WG+G NG+LGHG   D
Sbjct: 336 WRHTVAVTEGGRVYSWGRGVNGQLGHGAEQD 366



 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 174/364 (47%), Gaps = 23/364 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V  ++CG  H+  +   G V SWG    G+LGHG   +   PK I  L +  +E V CG 
Sbjct: 15  VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGA 74

Query: 295 HHTCAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            +T AV  S G +Y+WG    +FG LGHG+   +++P+ +     G  V  V+CG  HT 
Sbjct: 75  EYTIAVAPSRGQVYSWGWG--DFGRLGHGDCNDVFVPRPIE-FFSGRPVHRVACGDTHTL 131

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           VV   G+LFTFG    G LG G      +P+ V +L+G R    ACG  H+ A  E    
Sbjct: 132 VVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATE---- 187

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                   SG +F+WG G  G LG G+ + R +PT V  L         CG   +  ++ 
Sbjct: 188 --------SGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSE 239

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            G V+T G   YGQLG      + +P +V   L    +  +A G  H     S   +Y W
Sbjct: 240 DGRVFTFGWSKYGQLGHGDHTDRTVPCQVA-ALRHTRISSVAGGWRHTMAADSSGNLYGW 298

Query: 533 GKGANGRLGHGDTDDRNFPSLV-EALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQS 587
           G    G+LG GD+ DR  P LV  AL  ++V  + CG   T A+     ++ W  GV+  
Sbjct: 299 GWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQ 358

Query: 588 MCSG 591
           +  G
Sbjct: 359 LGHG 362



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 1/122 (0%)

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA 514
           EP    VSCG S +VA+ + G V + G    GQLG  +A+  L  +    LT   +E + 
Sbjct: 12  EPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVV 71

Query: 515 CG-DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           CG +Y +AV  SR +VY+WG G  GRLGHGD +D   P  +E    + V  + CG + T 
Sbjct: 72  CGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHTL 131

Query: 574 AI 575
            +
Sbjct: 132 VV 133



 Score = 42.7 bits (99), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 25/39 (64%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
           V  + CG RH   VT+ G V+SWG  + G+LGHG + D+
Sbjct: 329 VSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQDL 367


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 191/405 (47%), Gaps = 53/405 (13%)

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           G++  G H      G       P  V+  + L VQ + CGG+HAA++T  GE+F+WG   
Sbjct: 240 GVVDDGPHHEVGEGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGG 299

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLG 320
            GRLGHG    +  P+ I+AL+ I    VACG  +T AVT SG++YTWG G N   G LG
Sbjct: 300 FGRLGHGNREGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGEN---GRLG 356

Query: 321 HGNEMSLWLPKKLNGPLEGIH--VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
            G+      P +    +EG+H  V  V  G  H+ V+T  G ++ FG   +   GHGD  
Sbjct: 357 LGDVADRHTPSR----VEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEY--TGHGDHE 410

Query: 379 SVSTPREVDSLKG-----LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
            V  PR + +  G     +R +    G +HT A+               G+++ WG    
Sbjct: 411 DVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALT------------CQGQVYAWGHNRV 458

Query: 434 GRLGHGD--------KEARLVPT--CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            +LG G+        + A  +P+   V +LV  N  +V  G   + ALT  G +Y  G  
Sbjct: 459 AQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRN 518

Query: 484 VYGQLGDPKANGKLPTRVEG-----------KLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             GQLG     G  P    G           +L    +++IACG  H   +    EV+++
Sbjct: 519 YQGQLGLGSPQG-FPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSF 577

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKD--KQVKSIVCGTSFTAAI 575
           G G  G+LGH  T   +FP LV+ALK   +++  + CG + T  +
Sbjct: 578 GAGQKGQLGHESTTREDFPRLVQALKSTRREIMHVACGNNCTLVL 622



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 4/76 (5%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL--V 290
           L ++ IACGG H+  V + GEV+S+G    G+LGH   +    P+L+ ALK+   E+  V
Sbjct: 553 LKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREIMHV 612

Query: 291 ACGEHHTCAVTLSGDM 306
           ACG  + C + L+G +
Sbjct: 613 ACG--NNCTLVLAGGV 626


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 196/388 (50%), Gaps = 29/388 (7%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            +VF WG    D +        G   G K+   +P   ++   L    I  G +    VT+
Sbjct: 3465 NVFCWGLNDKDQL--------GGPKGSKIK--LPTLNDNLSALRCVQIVGGSKSLFCVTQ 3514

Query: 251  QGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
            +G+V++ GE   GRLG G+ +  VS P+ I +L    ++ VA   G  H+ A+T  G ++
Sbjct: 3515 EGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVF 3574

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  +   G LGH +  +   P+ +   L+   V  ++CG  H+A +TS G L+T+G G
Sbjct: 3575 SWGEGD--DGKLGHFSRWNCDKPRLIEA-LKSKRVRDIACGSSHSAAITSNGDLYTWGLG 3631

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LGHGD  +   P++V +L   R V+ ACG             + + +    GK+++
Sbjct: 3632 EYGRLGHGDNTTQLKPKQVKALAHERVVQVACG----------SRDAQTLALTDEGKVYS 3681

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGDGD G+LG G  E   VP  V  L +   CQ+ CG   ++ALT +G V+T G   Y +
Sbjct: 3682 WGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFR 3741

Query: 488  LGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG    A+ + P  VEG   K  V  +A G  H   +T   +V+ WG   +G+ G+G T 
Sbjct: 3742 LGHGTDAHVRKPQIVEGLKGKKIVH-VAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTT 3800

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                P+LV  L+  ++  + CG+S + A
Sbjct: 3801 VNRKPALV-VLEGYKISKVACGSSHSIA 3827



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/396 (32%), Positives = 195/396 (49%), Gaps = 26/396 (6%)

Query: 195  WGECTGDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQG 252
            WG   G G I G G +  G   GV       P + E+  V     +  G +    VT +G
Sbjct: 4457 WG---GSGQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEG 4513

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG 310
            +VF+ G   GGRLG G    VSHP  +++++++ ++ +A   G  H  A++  G++Y+WG
Sbjct: 4514 KVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWG 4573

Query: 311  -GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
             G +   G LGHGN      P+ ++  L G  V  ++ G  H+A +T+ G+L+T+G G +
Sbjct: 4574 EGED---GKLGHGNRSPCDRPRVIDS-LRGKEVVDIAAGGAHSACITANGELYTWGKGRY 4629

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFT 427
            G LGHGD      P+ V++LK  R V  ACG               + + C      +++
Sbjct: 4630 GRLGHGDSEDQPRPKLVEALKSYRVVDMACG------------SGDAQTLCITDDDNVWS 4677

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGDGD G+LG G  +   VP  +  L      +V CG   +VALT +G VYT G   Y +
Sbjct: 4678 WGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHR 4737

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            LG    +     R    L    V ++ACG  H    T   EV++WG    G+LG G T+ 
Sbjct: 4738 LGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNA 4797

Query: 548  RNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
               P LV +L  K++  + CG++ + A   +K VS 
Sbjct: 4798 IQRPRLVASLLGKKINRVACGSAHSLAWSTNKAVSA 4833



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 169/335 (50%), Gaps = 31/335 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  +G+ +       VP+ + S     ++ +A   GGRH+  
Sbjct: 3516 GKVYACGEAT-NGRLGLGI-TTGTVS-------VPRQITSLSQYVIKKVAVHSGGRHSLA 3566

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK+  V  +ACG  H+ A+T +GD+Y
Sbjct: 3567 LTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLY 3626

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG--PWHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK++   L    V  V+CG     T  +T  G+++++G
Sbjct: 3627 TWGLG--EYGRLGHGDNTTQLKPKQVKA-LAHERVVQVACGSRDAQTLALTDEGKVYSWG 3683

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P EVD L+  +  +  CG   + A+ +            SG++
Sbjct: 3684 DGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTK------------SGQV 3731

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G V+  G   +
Sbjct: 3732 WTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDH 3791

Query: 486  GQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYH 519
            GQ G+      + P  V   L    + ++ACG  H
Sbjct: 3792 GQQGNGTTTVNRKPALV--VLEGYKISKVACGSSH 3824



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 181/373 (48%), Gaps = 50/373 (13%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN----VELV 290
           VQ IAC  R   +++K G+V+                 + +  L   L+ +N     E++
Sbjct: 577 VQQIACSERCCLILSKAGKVYM----------------LYYTSLSPTLQQLNGFGDREVI 620

Query: 291 ACGEH----HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
               H    H   +T  G++++WG  N + G LGHG+  +   P  + G L G  V+ + 
Sbjct: 621 RIASHPDGKHYMGLTSDGEVFSWG--NGDGGKLGHGDYQNHEEPALITG-LSGKQVAKIC 677

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHT 404
           CG  ++  +TS G+++++G G FG LGHG     +TP  +   KG R V  ACG     T
Sbjct: 678 CGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQT 737

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
            AV +            SG +++WGDGD G+LG G  +    P  +  L+  +  +V CG
Sbjct: 738 LAVTD------------SGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCG 785

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
           +  ++ALT +G VYT G     +LG   + + + P ++E  L+   V++IA G  H   +
Sbjct: 786 NQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEA-LSSKKVKDIAIGSLHCMAI 844

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
           T   E+Y WG+   G+LG+    +   P+L+  ++ K +  + CG + T A     W SG
Sbjct: 845 TEDGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFA-----WTSG 899

Query: 584 VDQSMCSGCRIPF 596
               + S  R+PF
Sbjct: 900 GQWIVSS--RVPF 910



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 160/330 (48%), Gaps = 20/330 (6%)

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            Q  VF WG     +LG    S +  P L D L  +    +  G      VT  G +Y  G
Sbjct: 3463 QTNVFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACG 3522

Query: 311  -GSNCNFGLLGHGNEMSLWLPKKLNGPLEG-IHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
              +N   GL      +S+  P+++    +  I   +V  G  H+  +T+ G++F++G+G 
Sbjct: 3523 EATNGRLGLGITTGTVSV--PRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGD 3580

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
             G LGH  R +   PR +++LK  R    ACG  H+AA+             S+G L+TW
Sbjct: 3581 DGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAIT------------SNGDLYTW 3628

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYG 486
            G G+ GRLGHGD   +L P  V AL      QV+CG   + T+ALT  G VY+ G   +G
Sbjct: 3629 GLGEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFG 3688

Query: 487  QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            +LG   + G  +P  V+ +L    V +I CG      LT   +V+TWGKG   RLGHG  
Sbjct: 3689 KLGRGGSEGCNVPHEVD-RLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTD 3747

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                 P +VE LK K++  +  G     A+
Sbjct: 3748 AHVRKPQIVEGLKGKKIVHVAVGALHCLAV 3777



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 151/318 (47%), Gaps = 30/318 (9%)

Query: 263 GRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           G L    +   + P  +D   +I  V+ +AC E     ++ +G +Y    ++ +  L   
Sbjct: 552 GWLAWATEGGAAGPFSMDFFADIGGVQQIACSERCCLILSKAGKVYMLYYTSLSPTL--- 608

Query: 322 GNEMSLWLPKKLNG--PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
                    ++LNG    E I ++S   G  H   +TS G++F++G+G  G LGHGD  +
Sbjct: 609 ---------QQLNGFGDREVIRIASHPDGK-HYMGLTSDGEVFSWGNGDGGKLGHGDYQN 658

Query: 380 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
              P  +  L G +  +  CG  ++ A+             S+G++++WG G+ GRLGHG
Sbjct: 659 HEEPALITGLSGKQVAKICCGSSYSVALT------------SNGEVYSWGKGNFGRLGHG 706

Query: 440 DKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL 497
             E +  P  +          V+CG   + T+A+T +G VY+ G   YG+LG    +G  
Sbjct: 707 SSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRGGNDGCK 766

Query: 498 PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
             +V  KL    V  + CG+     LT    VYTWGKG N RLGHG  D    P  +EAL
Sbjct: 767 TPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEAL 826

Query: 558 KDKQVKSIVCGTSFTAAI 575
             K+VK I  G+    AI
Sbjct: 827 SSKKVKDIAIGSLHCMAI 844



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 140/305 (45%), Gaps = 27/305 (8%)

Query: 174 VSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
           ++S   G  +    S G+VF WG   G G LG G +++            P  +      
Sbjct: 622 IASHPDGKHYMGLTSDGEVFSWGNGDG-GKLGHGDYQNHEE---------PALITGLSGK 671

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC- 292
            V  I CG  ++  +T  GEV+SWG+   GRLGHG   D + P L+   K   +  VAC 
Sbjct: 672 QVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACG 731

Query: 293 -GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
            G+  T AVT SG +Y+WG  + ++G LG G       PK +   L G  V  V CG   
Sbjct: 732 SGDAQTLAVTDSGAVYSWG--DGDYGKLGRGGNDGCKTPKVIE-KLMGQDVVRVYCGNQF 788

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +  +T +G ++T+G G    LGHG       P+++++L   +    A G  H  A+ E  
Sbjct: 789 SMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITE-- 846

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                      G+L+ WG  ++G+LG+        PT +  +   N   V+CG + T A 
Sbjct: 847 ----------DGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAW 896

Query: 472 TTTGH 476
           T+ G 
Sbjct: 897 TSGGQ 901



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 101/203 (49%), Gaps = 20/203 (9%)

Query: 190 GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           G V+ WG+  GD G LG      G   G K     PK +E  +  DV  + CG + +  +
Sbjct: 744 GAVYSWGD--GDYGKLG-----RGGNDGCK----TPKVIEKLMGQDVVRVYCGNQFSMAL 792

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           TK G V++WG+    RLGHG +    HPK I+AL +  V+ +A G  H  A+T  G++Y 
Sbjct: 793 TKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYG 852

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +    G LG+ + +S +    L G +EG ++  V+CGP  T   TS GQ        
Sbjct: 853 WGRN--EQGQLGNPS-ISNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGGQWIVSSRVP 909

Query: 369 FGVLGHGDRISVSTPREVDSLKG 391
           F V      +  ST  ++D L G
Sbjct: 910 FIV-----DVCKSTFEQLDELLG 927



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 117/258 (45%), Gaps = 31/258 (12%)

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
            +F +G      LG      +  P   D+L  LR V+              +VG S S  C
Sbjct: 3466 VFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQ--------------IVGGSKSLFC 3511

Query: 421  SS--GKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC--GHSLTVALTTTG 475
             +  GK++  G+   GRLG G     + VP  + +L +    +V+   G   ++ALTT G
Sbjct: 3512 VTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDG 3571

Query: 476  HVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
             V++ G    G+LG   + N   P  +E   +K  V +IACG  H A +TS  ++YTWG 
Sbjct: 3572 KVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKR-VRDIACGSSHSAAITSNGDLYTWGL 3630

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL------HKWVSG----V 584
            G  GRLGHGD   +  P  V+AL  ++V  + CG+     + L      + W  G    +
Sbjct: 3631 GEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKL 3690

Query: 585  DQSMCSGCRIPFNFKRKR 602
             +    GC +P    R R
Sbjct: 3691 GRGGSEGCNVPHEVDRLR 3708


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 196/400 (49%), Gaps = 33/400 (8%)

Query: 181  SGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
            +GH D +    V +WG    D    GG+  S     VK+ +F P        L   +IA 
Sbjct: 3052 TGHTDQELPCTVMVWG--LNDKEQLGGLKGSK----VKVPTFSPTISR----LRPIHIAG 3101

Query: 241  GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTC 298
            G +   +V++ G+V++ GE   GRLG GV  +V  P  +  L    V+ VA   G  H  
Sbjct: 3102 GSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHAL 3161

Query: 299  AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+TL G +++WG G +   G LGHGN  +L  P+ +   L    +  ++CG  H+A ++S
Sbjct: 3162 ALTLDGKVFSWGEGED---GKLGHGNRSTLDKPRLVEA-LRAKKIRDIACGSSHSAAISS 3217

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSS 415
             G+L+T+G G +G LGHGD  +   P+ V +L G R ++ ACG     T A+ E      
Sbjct: 3218 QGELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTE------ 3271

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                   G +F+WGDGD G+LG G  E    P  +  L      Q+ CG   ++ALT  G
Sbjct: 3272 ------DGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAG 3325

Query: 476  HVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
             V+T G   Y +LG     + + P  + G L  + V  +A G  H   +T   +VY WG 
Sbjct: 3326 EVWTWGKGDYYRLGHGGDQHVRKPQPIAG-LRGHRVIHVAVGALHCLAVTDAGQVYAWGD 3384

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              +G+ G G+T     P+LV  L    V  + CG+S + A
Sbjct: 3385 NDHGQQGSGNTFVNKKPALVIGLDAVIVNRVACGSSHSMA 3424



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/380 (32%), Positives = 189/380 (49%), Gaps = 24/380 (6%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++      P   E+  +L    +A G +    VT  G++F+ G   
Sbjct: 4216 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4275

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGL 318
            GGRLG G     + P L+ +L+++ V+ VA   G  H  A+T  G++Y WG G +   G 
Sbjct: 4276 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGED---GK 4332

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
            LGHGN MS   P KL   L G+ V+ ++CG  H+A +T++G + T+G G +G LGHGD  
Sbjct: 4333 LGHGNRMSYDRP-KLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSE 4391

Query: 379  SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRL 436
                P+ V++L G R +  ACG               + + C      +++WGDGD G+L
Sbjct: 4392 DQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGDYGKL 4439

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NG 495
            G G  +   +P  + +L      +V CG   +VALT +G VYT G   + +LG     + 
Sbjct: 4440 GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHV 4499

Query: 496  KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
            + P +V     K  +  IA G  H    +   EV+TWG    G+LG G       P LV 
Sbjct: 4500 RRPKKVAALQGKKII-SIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVA 4558

Query: 556  ALKDKQVKSIVCGTSFTAAI 575
            AL+ K +  + CG++ T A+
Sbjct: 4559 ALQGKHIVKVTCGSAHTLAL 4578



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/288 (36%), Positives = 150/288 (52%), Gaps = 29/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG          G +M    PK VE    + V +IACG  H+A +T
Sbjct: 4320 GEVYAWGE-GEDGKLG---------HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAIT 4369

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
              G V +WG+   GRLGHG   D   PKL++AL       +AC  G+  T  +T   +++
Sbjct: 4370 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4429

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LG G      LP K+   L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4430 SWG--DGDYGKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4486

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLF 426
             F  LGHG    V  P++V +L+G + +  A G  H  A             CS +G++F
Sbjct: 4487 DFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDAGEVF 4533

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            TWGD D G+LG G   A   P  VAAL   +  +V+CG + T+AL+T+
Sbjct: 4534 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4581



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 148/307 (48%), Gaps = 19/307 (6%)

Query: 223  VPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
            +P  + S   + V+ +A   GG+H   +T  GEV++WGE   G+LGHG       PKL++
Sbjct: 4289 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4348

Query: 281  ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
             L  ++V  +ACG  H+ A+T SG + TWG     +G LGHG+      PK +   L G 
Sbjct: 4349 HLNGMSVADIACGSAHSAAITASGHVLTWGKGR--YGRLGHGDSEDQLRPKLVEA-LLGY 4405

Query: 341  HVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
                ++CG     T  +T    ++++GDG +G LG G       P +++SL GL  ++  
Sbjct: 4406 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4465

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            CG   + A+ +            SG ++TWG GD  RLGHG  E    P  VAAL     
Sbjct: 4466 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKI 4513

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
              ++ G    VA +  G V+T G    GQLGD         R+   L    + ++ CG  
Sbjct: 4514 ISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4573

Query: 519  HVAVLTS 525
            H   L++
Sbjct: 4574 HTLALST 4580



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 115/333 (34%), Positives = 165/333 (49%), Gaps = 33/333 (9%)

Query: 254  VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            V  WG    E+LGG  G  V      P  I  L+ I++   A G      V+  G +Y  
Sbjct: 3063 VMVWGLNDKEQLGGLKGSKVKVPTFSPT-ISRLRPIHI---AGGSKSLFVVSQDGKVYAC 3118

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G   ++ LP +L  P+   +V    +V  G  H   +T  G++F++G
Sbjct: 3119 GEGTN---GRLGLGVTHNVPLPHQL--PVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3173

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+R ++  PR V++L+  +    ACG  H+AA+             S G+L
Sbjct: 3174 EGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAI------------SSQGEL 3221

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  VAAL      QV+CG   + T+ALT  G V++ G  
Sbjct: 3222 YTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3281

Query: 484  VYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G   P  +E +L+   V +I CG      LT   EV+TWGKG   RLGH
Sbjct: 3282 DFGKLGRGGSEGSSTPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3340

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P  +  L+  +V  +  G     A+
Sbjct: 3341 GGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAV 3373



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 150/318 (47%), Gaps = 40/318 (12%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
             +Q +AC      L++K+G++++W           +    + P+ +D  +  N   ++ 
Sbjct: 600 FQLQQVACSEDVVLLLSKEGKLYNW----------HIAKPEAEPQQLDFAEIANETFISI 649

Query: 293 GEH----HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
             H    H  AV  + + Y+WG  +     LGHG+  +  LP K+   +    V SV CG
Sbjct: 650 AAHCEGRHFLAVDSNFNAYSWGVGDSRR--LGHGDCHARELPTKIESLVR--LVKSVYCG 705

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             ++A +T  G L+T+G GT+G LGHG       P  V +LK  +             VV
Sbjct: 706 CSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQ-------------VV 752

Query: 409 EVMVGSSSSSNC---SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
           +V +GS  +      S G +F WGDGD G+LG+G   + L+P  +  L  P   +V  G 
Sbjct: 753 DVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCL--PRVQRVFAGA 810

Query: 466 SLTVALTTTGHVYTMG--SPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAV 522
             ++AL+  G +Y+ G  S +  QL +    G  +P  + G   K  V ++A G  H   
Sbjct: 811 QFSLALSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIV-DVAVGVAHCLA 869

Query: 523 LTSRTEVYTWGKGANGRL 540
           L+S  E++ WG+  N ++
Sbjct: 870 LSSSGEIFGWGRNDNQQI 887



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 120/257 (46%), Gaps = 30/257 (11%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  ++ +G    G LG   G RI   TP E  SL  LR V+ A G     AV        
Sbjct: 4213 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAVT------- 4263

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKLF  G G  GRLG G  ++  +PT + +L  V      V+ G    +ALTT
Sbjct: 4264 -----PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4318

Query: 474  TGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G VY  G    G+LG   + +   P  VE  L    V +IACG  H A +T+   V TW
Sbjct: 4319 DGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLTW 4377

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG----- 583
            GKG  GRLGHGD++D+  P LVEAL   +   I CG+     +C+    + W  G     
Sbjct: 4378 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4437

Query: 584  -VDQSMCSGCRIPFNFK 599
             + +    GC++P+  +
Sbjct: 4438 KLGRGGSDGCKLPYKIE 4454



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 28/221 (12%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           +P  +ES V L V+++ CG  ++A +T  G +++WG    GRLGHG   D   P ++ AL
Sbjct: 688 LPTKIESLVRL-VKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMAL 746

Query: 283 KNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEG 339
           K+  V  VA   G+ HT  +T  G ++ WG  + ++G LG+G+  S  LP+ ++  P   
Sbjct: 747 KDHQVVDVALGSGDAHTLCLTSEGLVFAWG--DGDYGKLGNGSCNSSLLPQLIDCLP--- 801

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG----DRISVSTPREVDSLKGLRTV 395
             V  V  G   +  ++  GQL+++G  +   LGH     +    S PR +  L+  R V
Sbjct: 802 -RVQRVFAGAQFSLALSCEGQLYSWGKAS--CLGHQLVERNVQGCSVPRLITGLQHKRIV 858

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL 436
             A GV H  A+             SSG++F WG  D  ++
Sbjct: 859 DVAVGVAHCLAL------------SSSGEIFGWGRNDNQQI 887



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 142/333 (42%), Gaps = 56/333 (16%)

Query: 285 INVELVACGEHHTCAVTLSGDMYTWGGS-------NCNFGLLGHGNEMSLWLPKKLNGPL 337
             ++ VAC E     ++  G +Y W  +         +F  + +   +S+          
Sbjct: 600 FQLQQVACSEDVVLLLSKEGKLYNWHIAKPEAEPQQLDFAEIANETFISI---------- 649

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
                 +  C   H   V S    +++G G    LGHGD  +   P +++SL  +R V++
Sbjct: 650 ------AAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESL--VRLVKS 701

Query: 398 A-CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
             CG  ++AA+               G L+TWG G  GRLGHG  + + +P  V AL + 
Sbjct: 702 VYCGCSYSAAIT------------LGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDH 749

Query: 457 NFCQVSC--GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA 514
               V+   G + T+ LT+ G V+  G   YG+LG+   N  L  ++   L +  V+ + 
Sbjct: 750 QVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPR--VQRVF 807

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN-----FPSLVEALKDKQVKSIVCGT 569
            G      L+   ++Y+WGK +   LGH    +RN      P L+  L+ K++  +  G 
Sbjct: 808 AGAQFSLALSCEGQLYSWGKASC--LGH-QLVERNVQGCSVPRLITGLQHKRIVDVAVGV 864

Query: 570 SFTAAIC----LHKWVSGVDQSMC--SGCRIPF 596
           +   A+     +  W    +Q +C  S C  P 
Sbjct: 865 AHCLALSSSGEIFGWGRNDNQQICPASVCSEPL 897


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 177/357 (49%), Gaps = 21/357 (5%)

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
            VP   ++   L   +IA G +   +V++ G+V++ GE   GRLG GV  +V  P  +  L
Sbjct: 3009 VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3068

Query: 283  KNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            +   V+ VA   G  H  A+TL G +++WG G +   G LGHGN  +L  P+ +   L  
Sbjct: 3069 RQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED---GKLGHGNRTTLDKPRLVEA-LRA 3124

Query: 340  IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
              +  V+CG  H+A ++S G+L+T+G G +G LGHGD  +   P+ V +L G R V+ AC
Sbjct: 3125 KKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVAC 3184

Query: 400  GV--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
            G     T A+ E             G +F+WGDGD G+LG G  E    P  +  L    
Sbjct: 3185 GSRDAQTLALTE------------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3232

Query: 458  FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD 517
              Q+ CG   ++ALT  G V+T G   Y +LG          +  G L    V  +A G 
Sbjct: 3233 VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGA 3292

Query: 518  YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             H   +T   +VY WG   +G+ G G+T     P+LV  L    V  + CG+S + A
Sbjct: 3293 LHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/380 (32%), Positives = 190/380 (50%), Gaps = 24/380 (6%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++      P   E+  +L    +A G +    VT  G++F+ G   
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4110

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGL 318
            GGRLG G     + P L+ +L+++ V+ VA   G  H  A+T  G++Y WG G +   G 
Sbjct: 4111 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED---GK 4167

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
            LGHGN MS   PK +   L G+ V+ ++CG  H+A +T++G + T+G G +G LGHGD  
Sbjct: 4168 LGHGNRMSYDRPKLVEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSE 4226

Query: 379  SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG--KLFTWGDGDRGRL 436
                P+ V++L G R +  ACG               + + C +    +++WGDGD G+L
Sbjct: 4227 DQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGDYGKL 4274

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG- 495
            G G  +   +P  + +L      +V CG   +VALT +G VYT G   + +LG    +  
Sbjct: 4275 GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV 4334

Query: 496  KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
            + P +V     K  +  IA G  H    +   EVYTWG    G+LG G       P LV 
Sbjct: 4335 RRPKKVAALQGKKIIS-IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVA 4393

Query: 556  ALKDKQVKSIVCGTSFTAAI 575
            AL+ K +  + CG++ T A+
Sbjct: 4394 ALQGKHIVKVTCGSAHTLAL 4413



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 164/333 (49%), Gaps = 27/333 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+  GE T +G LG G+  +     V +   +P  V    V+    +  GG+HA  +T
Sbjct: 3038 GKVYACGEGT-NGRLGLGVTHN-----VPLPHQLP--VLRQYVVKKVAVHSGGKHALALT 3089

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G+VFSWGE   G+LGHG  + +  P+L++AL+   +  VACG  H+ A++  G++YTW
Sbjct: 3090 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTW 3149

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDG 367
            G     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++GDG
Sbjct: 3150 GLG--EYGRLGHGDNTTQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 3206

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             FG LG G      TP E++ L G+  V+  CG   + A+              +G+++T
Sbjct: 3207 DFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTR------------AGEVWT 3254

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WG GD  RLGHG  +    P  +  L       V+ G    +A+T  G VY  G   +GQ
Sbjct: 3255 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3314

Query: 488  LGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYH 519
             G       K P  V G L   FV  +ACG  H
Sbjct: 3315 QGSGNTFVNKKPALVIG-LDAVFVNRVACGSSH 3346



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 150/307 (48%), Gaps = 19/307 (6%)

Query: 223  VPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
            +P  + S   + V+ +A   GG+H   +T +GEV++WGE   G+LGHG       PKL++
Sbjct: 4124 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4183

Query: 281  ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
             L  ++V  +ACG  H+ A+T SG + TWG     +G LGHG+      PK +   L G 
Sbjct: 4184 HLNGMSVADIACGSAHSAAITASGHVLTWGKGR--YGRLGHGDSEDQLRPKLVEA-LLGY 4240

Query: 341  HVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
                ++CG     T  +T    ++++GDG +G LG G       P +++SL GL  V+  
Sbjct: 4241 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4300

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            CG   + A+ +            SG ++TWG GD  RLGHG  +    P  VAAL     
Sbjct: 4301 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4348

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
              ++ G    VA + +G VYT G    GQLGD         R+   L    + ++ CG  
Sbjct: 4349 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4408

Query: 519  HVAVLTS 525
            H   L++
Sbjct: 4409 HTLALST 4415



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/288 (36%), Positives = 150/288 (52%), Gaps = 29/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG          G +M    PK VE    + V +IACG  H+A +T
Sbjct: 4155 GEVYAWGEGE-DGKLG---------HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAIT 4204

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
              G V +WG+   GRLGHG   D   PKL++AL       +AC  G+  T  +T   +++
Sbjct: 4205 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4264

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LG G      LP K+   L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4265 SWG--DGDYGKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4321

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLF 426
             F  LGHG    V  P++V +L+G + +  A G  H  A             CS SG+++
Sbjct: 4322 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEVY 4368

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            TWGD D G+LG G   A   P  VAAL   +  +V+CG + T+AL+T+
Sbjct: 4369 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 163/333 (48%), Gaps = 33/333 (9%)

Query: 254  VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            V  WG    E+LGG  G    S V  P     +  +    +A G      V+  G +Y  
Sbjct: 2988 VMVWGLNDKEQLGGLKG----SKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYAC 3043

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G   ++ LP +L  P+   +V    +V  G  H   +T  G++F++G
Sbjct: 3044 GEGTN---GRLGLGVTHNVPLPHQL--PVLRQYVVKKVAVHSGGKHALALTLDGKVFSWG 3098

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+R ++  PR V++L+  +    ACG  H+AA+             S G+L
Sbjct: 3099 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI------------SSQGEL 3146

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V AL      QV+CG   + T+ALT  G V++ G  
Sbjct: 3147 YTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 3206

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G   P  +E +L+   V +I CG      LT   EV+TWGKG   RLGH
Sbjct: 3207 DFGKLGRGGSEGSDTPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3265

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P  +  L+ ++V  +  G     A+
Sbjct: 3266 GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAV 3298



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 143/308 (46%), Gaps = 33/308 (10%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA- 291
             ++ +AC      +++++G++++W      RL      +     + +   ++ + +   
Sbjct: 572 FQIKQVACCETQMLILSQEGKLYTW------RLA---KPEAEPLPMEEVAHDVFISIAGH 622

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           C   H  A+  + + Y+WG    +   LGHG+  +  +P K+   LE   V SV CG  +
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSY 679

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +A +T  G L T+G GT+  LGHG+    S P  V +L                 VV+V 
Sbjct: 680 SAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS-------------DHMVVDVA 726

Query: 412 VGSSSSSNC---SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
           +GS  + +    S G +F WGDGD G+LG+G+    L P  V +L  P   +V  G   +
Sbjct: 727 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFS 784

Query: 469 VALTTTGHVYTMGSP--VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           VAL++ G +YT G    +  QL +    G    R+   L    + ++A    H   L+S 
Sbjct: 785 VALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSS 844

Query: 527 TEVYTWGK 534
            EV+ WG+
Sbjct: 845 GEVFGWGR 852



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 110/213 (51%), Gaps = 19/213 (8%)

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           ++WG G+  RLGHGD  AR VPT +AAL +     V CG S + A+T  G++ T G   Y
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY 697

Query: 486 GQLGDPKANGK-LPTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGRLGH 542
            +LG   ++ + LPT V   L+ + V ++A   GD H   LTS   V+ WG G  G+LG+
Sbjct: 698 ARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 756

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG-------VDQSM--C 589
           G+ +    P LVE+L   +V+ +  G+ F+ A+     L+ W          V++S+  C
Sbjct: 757 GNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGC 814

Query: 590 SGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 622
           S  R+  + + KR       + +C   SS   V
Sbjct: 815 SVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEV 847



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 120/257 (46%), Gaps = 30/257 (11%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  ++ +G    G LG   G RI   TP E  SL  LR V+ A G     AV        
Sbjct: 4048 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAVT------- 4098

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKLF  G G  GRLG G  ++  +PT + +L  V      V+ G    +ALTT
Sbjct: 4099 -----PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4153

Query: 474  TGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G VY  G    G+LG   + +   P  VE  L    V +IACG  H A +T+   V TW
Sbjct: 4154 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLTW 4212

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG----- 583
            GKG  GRLGHGD++D+  P LVEAL   +   I CG+     +C+    + W  G     
Sbjct: 4213 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4272

Query: 584  -VDQSMCSGCRIPFNFK 599
             + +    GC++P+  +
Sbjct: 4273 KLGRGGSDGCKLPYKIE 4289



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 117/268 (43%), Gaps = 53/268 (19%)

Query: 191 DVFI--WGECTGDGILG------------GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQ 236
           DVFI   G C G   L             G  HR G   G      VP  + +     VQ
Sbjct: 614 DVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGH--GDTHARAVPTKIAALEQHCVQ 671

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GE 294
           ++ CG  ++A +T  G + +WG     RLGHG   D S P L+ AL +  V  VA   G+
Sbjct: 672 SVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGD 731

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS------VSCG 348
            H+ A+T  G ++ WG  + ++G LG+GN          NG L+ I V S      V  G
Sbjct: 732 AHSLALTSEGLVFAWG--DGDYGKLGNGN---------CNGSLQPILVESLPRVQRVFAG 780

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHG----DRISVSTPREVDSLKGLRTVRAACGVWHT 404
              +  ++S GQL+T+G  T   LGH          S PR V SL+  R V  A  V H 
Sbjct: 781 SQFSVALSSEGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 838

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            A+             SSG++F WG  D
Sbjct: 839 LAL------------SSSGEVFGWGRND 854



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 2/157 (1%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GK++  G+G  GRLG G      +P  +  L +    +V+   G    +ALT  G V++ 
Sbjct: 3038 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSW 3097

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            G    G+LG          R+   L    + ++ACG  H A ++S+ E+YTWG G  GRL
Sbjct: 3098 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 3157

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            GHGD   +  P LV AL  ++V  + CG+     + L
Sbjct: 3158 GHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLAL 3194



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 14/158 (8%)

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS--CGHSLTVALTTTGHVYTM 480
           GKL+TW      RL   + E    P  +  +    F  ++  C     +A+ +  + Y+ 
Sbjct: 591 GKLYTW------RLAKPEAE----PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSW 640

Query: 481 GSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           G+    +LG    + + +PT++   L ++ V+ + CG  + A +T    + TWG+G   R
Sbjct: 641 GTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 699

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           LGHG++DDR+ P+LV AL D  V  +  G+    ++ L
Sbjct: 700 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 737


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 177/357 (49%), Gaps = 21/357 (5%)

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
            VP   ++   L   +I+ G +   +V++ G+VF+ GE   GRLG GV  +V  P  +  L
Sbjct: 3050 VPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVL 3109

Query: 283  KNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
                V+ VA   G  H  A+TL G +++WG G +   G LGHGN  +L  P+ +   L  
Sbjct: 3110 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED---GKLGHGNRTTLDKPRLVEA-LRA 3165

Query: 340  IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
              +  V+CG  H+A ++S G+L+T+G G +G LGHGD  +   P++V +L G R ++ AC
Sbjct: 3166 KKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVAC 3225

Query: 400  GV--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
            G     T A+ E             G +F+WGDGD G+LG G  E    P  +  L    
Sbjct: 3226 GSRDAQTLALTE------------DGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG 3273

Query: 458  FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD 517
              Q+ CG   ++ALT  G V+T G   Y +LG          +  G L    V  +A G 
Sbjct: 3274 VIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGA 3333

Query: 518  YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             H   +T   +VY WG   +G+ G G+T     P+LV  L    V  + CG+S + A
Sbjct: 3334 LHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3390



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/380 (33%), Positives = 190/380 (50%), Gaps = 24/380 (6%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++      P   E+  +L    +A G +    VT  G++F+ G   
Sbjct: 4148 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4207

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGL 318
            GGRLG G     + P L+ +L+++ V+ VA   G  H  A+T  G++Y WG G +   G 
Sbjct: 4208 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED---GK 4264

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
            LGHGN MS   PK +   L G+ V+ ++CG  H+A +TS+G + T+G G +G LGHGD  
Sbjct: 4265 LGHGNRMSYDRPKLVEH-LNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSE 4323

Query: 379  SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG--KLFTWGDGDRGRL 436
                P+ V++L G R +  ACG               + + C +    +++WGDGD G+L
Sbjct: 4324 DQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGDYGKL 4371

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG- 495
            G G  +   +P  + +L      +V CG   +VALT +G VYT G   + +LG    +  
Sbjct: 4372 GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV 4431

Query: 496  KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
            + P +V     K  +  IA G  H    +   EVYTWG    G+LG G       P LV 
Sbjct: 4432 RRPKKVAALQGKKIIS-IATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVA 4490

Query: 556  ALKDKQVKSIVCGTSFTAAI 575
            AL+ K +  + CG++ T A+
Sbjct: 4491 ALQGKHIVKVTCGSAHTLAL 4510



 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 166/333 (49%), Gaps = 27/333 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF  GE T +G LG G+  +     V +   +P  V    V+    +  GG+HA  +T
Sbjct: 3079 GKVFACGEGT-NGRLGLGVTHN-----VPLPHQLP--VLHQYVVKKVAVHSGGKHALALT 3130

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G+VFSWGE   G+LGHG  + +  P+L++AL+   +  VACG  H+ A++  G++YTW
Sbjct: 3131 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTW 3190

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDG 367
            G     +G LGHG+  +   PK++   L G  V  V+CG     T  +T  G +F++GDG
Sbjct: 3191 GLG--EYGRLGHGDNATQLKPKQVTA-LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3247

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             FG LG G     +TP E++ L G+  ++  CG   + A+              +G+++T
Sbjct: 3248 DFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTR------------AGEVWT 3295

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WG GD  RLGHG  +    P  +  L       V+ G    +A+T  G VY  G   +GQ
Sbjct: 3296 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3355

Query: 488  LGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYH 519
             G       K P  V G L   FV  +ACG  H
Sbjct: 3356 QGSGNTFVNKKPALVIG-LDAVFVNRVACGSSH 3387



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 149/307 (48%), Gaps = 19/307 (6%)

Query: 223  VPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
            +P  + S   + V+ +A   GG+H   +T +GEV++WGE   G+LGHG       PKL++
Sbjct: 4221 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4280

Query: 281  ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
             L  ++V  +ACG  H+ A+T SG + TWG     +G LGHG+      PK +   L G 
Sbjct: 4281 HLNGMSVADIACGSAHSAAITSSGHVLTWGKGR--YGRLGHGDSEDQLRPKLVEA-LLGY 4337

Query: 341  HVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
                ++CG     T  +T    ++++GDG +G LG G       P +++SL GL  ++  
Sbjct: 4338 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4397

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            CG   + A+ +            SG ++TWG GD  RLGHG  +    P  VAAL     
Sbjct: 4398 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4445

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
              ++ G    VA +  G VYT G    GQLGD         R+   L    + ++ CG  
Sbjct: 4446 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4505

Query: 519  HVAVLTS 525
            H   L++
Sbjct: 4506 HTLALST 4512



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/288 (35%), Positives = 150/288 (52%), Gaps = 29/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG          G +M    PK VE    + V +IACG  H+A +T
Sbjct: 4252 GEVYAWGEGE-DGKLG---------HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAIT 4301

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
              G V +WG+   GRLGHG   D   PKL++AL       +AC  G+  T  +T   +++
Sbjct: 4302 SSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4361

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LG G      LP K+   L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4362 SWG--DGDYGKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4418

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLF 426
             F  LGHG    V  P++V +L+G + +  A G  H  A             CS +G+++
Sbjct: 4419 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDAGEVY 4465

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            TWGD D G+LG G   A   P  VAAL   +  +V+CG + T+AL+T+
Sbjct: 4466 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4513



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 163/333 (48%), Gaps = 33/333 (9%)

Query: 254  VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            V  WG    E+LGG  G    S V  P     +  +    ++ G      V+  G ++  
Sbjct: 3029 VMVWGLNDKEQLGGLKG----SKVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFAC 3084

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G   ++ LP +L  P+   +V    +V  G  H   +T  G++F++G
Sbjct: 3085 GEGTN---GRLGLGVTHNVPLPHQL--PVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3139

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+R ++  PR V++L+  +    ACG  H+AA+             S G+L
Sbjct: 3140 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI------------SSQGEL 3187

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V AL      QV+CG   + T+ALT  G V++ G  
Sbjct: 3188 YTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3247

Query: 484  VYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G   P  +E +L+   V +I CG      LT   EV+TWGKG   RLGH
Sbjct: 3248 DFGKLGRGGSEGSATPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3306

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P  +  L+ ++V  +  G     A+
Sbjct: 3307 GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAV 3339



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 142/319 (44%), Gaps = 56/319 (17%)

Query: 276 PKLIDALKNIN----VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK 331
           P L+ +L  +N    V+ +AC E     ++  G +Y     NC  G            P+
Sbjct: 558 PLLVGSLPLLNCRFQVKQIACSESLLLLLSQDGKLY-----NCRLGK-----------PE 601

Query: 332 KLNGPLEGIHVSSV-----SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
               P+E +   ++      C   H   + S    +++G G    LGHGD  + + P ++
Sbjct: 602 LEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKI 661

Query: 387 DSLKGLRTVRAA-CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
            +L   R V+A  CG  ++AA+              SG L+TWG G  GRLGHG+ + + 
Sbjct: 662 SALD--RCVKAVFCGCSYSAAIT------------WSGNLYTWGRGTYGRLGHGNSDDQC 707

Query: 446 VPTCVAALVEPNFCQVSCG----HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTR 500
           VP  V AL E     V+ G    HSL   LT+ G VY  G   YG+LG+   N  L P  
Sbjct: 708 VPAIVMALAEYEIIDVALGSGDAHSL--CLTSEGLVYAWGDGDYGKLGNGNCNSSLQPIL 765

Query: 501 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR----NFPSLVEA 556
           VE   T   V+ I  G      LT+   +Y+WGK +   LGH   +      + P LV +
Sbjct: 766 VE---TLPRVQRIFAGAQSSMALTTEGHLYSWGKASC--LGHQQVERSVQGCSVPRLVSS 820

Query: 557 LKDKQVKSIVCGTSFTAAI 575
           L+ K++  +  G +   A+
Sbjct: 821 LQHKRLVDVAVGVAHCLAL 839



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 120/257 (46%), Gaps = 30/257 (11%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  ++ +G    G LG   G RI   TP E  SL  LR V+ A G     AV        
Sbjct: 4145 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAVT------- 4195

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKLF  G G  GRLG G  ++  +PT + +L  V      V+ G    +ALTT
Sbjct: 4196 -----PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4250

Query: 474  TGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G VY  G    G+LG   + +   P  VE  L    V +IACG  H A +TS   V TW
Sbjct: 4251 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITSSGHVLTW 4309

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG----- 583
            GKG  GRLGHGD++D+  P LVEAL   +   I CG+     +C+    + W  G     
Sbjct: 4310 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4369

Query: 584  -VDQSMCSGCRIPFNFK 599
             + +    GC++P+  +
Sbjct: 4370 KLGRGGSDGCKLPYKIE 4386



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 2/157 (1%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GK+F  G+G  GRLG G      +P  +  L +    +V+   G    +ALT  G V++ 
Sbjct: 3079 GKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3138

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            G    G+LG          R+   L    + ++ACG  H A ++S+ E+YTWG G  GRL
Sbjct: 3139 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 3198

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            GHGD   +  P  V AL  ++V  + CG+     + L
Sbjct: 3199 GHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLAL 3235



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 120/270 (44%), Gaps = 54/270 (20%)

Query: 181 SGHDDG------DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           +GH +G      DS  + + WG         G  HR G   G      VP  + SA+   
Sbjct: 619 AGHCEGRHFLAIDSNRNAYSWG--------AGEDHRLGH--GDTHARAVPTKI-SALDRC 667

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
           V+ + CG  ++A +T  G +++WG    GRLGHG   D   P ++ AL    +  VA   
Sbjct: 668 VKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGS 727

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS------VS 346
           G+ H+  +T  G +Y WG  + ++G LG+GN          N  L+ I V +      + 
Sbjct: 728 GDAHSLCLTSEGLVYAWG--DGDYGKLGNGN---------CNSSLQPILVETLPRVQRIF 776

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISV---STPREVDSLKGLRTVRAACGVW 402
            G   +  +T+ G L+++G  +   LGH     SV   S PR V SL+  R V  A GV 
Sbjct: 777 AGAQSSMALTTEGHLYSWGKAS--CLGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVA 834

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           H  A+             S G++F WG  D
Sbjct: 835 HCLALT------------SCGEVFGWGRND 852



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 435 RLGHGDKEARLVPTCVAALVEPNFCQVS--CGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
           RLG  + E    P  +  L +     ++  C     +A+ +  + Y+ G+    +LG   
Sbjct: 596 RLGKPELE----PQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGD 651

Query: 493 ANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + + +PT++        V+ + CG  + A +T    +YTWG+G  GRLGHG++DD+  P
Sbjct: 652 THARAVPTKISA--LDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVP 709

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICL 577
           ++V AL + ++  +  G+    ++CL
Sbjct: 710 AIVMALAEYEIIDVALGSGDAHSLCL 735


>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
 gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 448

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 183/361 (50%), Gaps = 34/361 (9%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS--DVSHPKLI 279
           + P+     +V  +  +ACG  H A V K G +++ G    G+LG G  S  +   P+L+
Sbjct: 13  YYPRVCSFQIV--IHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLV 70

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLE 338
            AL    V  V+CG  HTCA+  SG++++WG S+   G LG  +  S + P+ +N   L+
Sbjct: 71  SALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSE--GQLGINSNGSHYNPQLVNFSDLK 128

Query: 339 GIH--VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
           GI+  V+ VSCG +HT  V   GQ+ +FG G  G LG G++     P  ++SL   + ++
Sbjct: 129 GINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFLLNSLS--QIIK 186

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
             CG +HT  + E            SG++++ G  D G+LG G  E  +    +   +E 
Sbjct: 187 VKCGFYHTLFLDE------------SGRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEH 234

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
           +F +     S + A+T    +Y  G    GQ   P+           ++ +  V EI+ G
Sbjct: 235 SFIKKIFAGSHSAAITDANEIYFFGKSQLGQFLYPQL---------VRICQGDVNEISIG 285

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
           ++    +T   +VY+WG    G+LG GD+D R  PSLVE L +K+V S  CG ++   IC
Sbjct: 286 NHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVEPLNEKKVISATCGENYV--IC 343

Query: 577 L 577
           L
Sbjct: 344 L 344



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 46/290 (15%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PK 277
           +SF P+ V +     V  ++CG  H   +   GE+FSWG+   G+L  G++S+ SH  P+
Sbjct: 63  NSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQL--GINSNGSHYNPQ 120

Query: 278 LIDA--LKNIN--VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
           L++   LK IN  V  V+CG +HT AV  +G + ++G      G LG GN+   + P  L
Sbjct: 121 LVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKK--GQLGTGNQNKQYKPFLL 178

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGL 392
           N   +   +  V CG +HT  +  +G++++ G    G LG G +  ++S+PR V  L+  
Sbjct: 179 NSLSQ---IIKVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEHS 235

Query: 393 RTVRAACGVWHTAAVV------------------------------EVMVGSSSSSNCS- 421
              +   G  H+AA+                               E+ +G+      + 
Sbjct: 236 FIKKIFAGS-HSAAITDANEIYFFGKSQLGQFLYPQLVRICQGDVNEISIGNHFGVAVTY 294

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
            GK+++WG   +G+LG GD + R++P+ V  L E      +CG +  + L
Sbjct: 295 DGKVYSWGINQQGQLGQGDSDVRIIPSLVEPLNEKKVISATCGENYVICL 344



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 126/299 (42%), Gaps = 55/299 (18%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+ + +G LG  I+ +GS+   ++ +F      +  V DV   +CG  H   V 
Sbjct: 95  GELFSWGD-SSEGQLG--INSNGSHYNPQLVNFSDLKGINTFVTDV---SCGYYHTVAVL 148

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           K G+V S+G    G+LG G  +    P L+++L  I    V CG +HT  +  SG +Y+ 
Sbjct: 149 KNGQVCSFGSGKKGQLGTGNQNKQYKPFLLNSLSQI--IKVKCGFYHTLFLDESGRVYSC 206

Query: 310 GGSNCNFGLLGHG-NEMSLWLPKK--------LNGPLEGIH------------------- 341
           G ++   G LG G NE ++  P+         +     G H                   
Sbjct: 207 GLNDE--GQLGQGHNEGNISSPRLVLELEHSFIKKIFAGSHSAAITDANEIYFFGKSQLG 264

Query: 342 --------------VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 387
                         V+ +S G      VT  G+++++G    G LG GD      P  V+
Sbjct: 265 QFLYPQLVRICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVE 324

Query: 388 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG--DGDRGRLGHGDKEAR 444
            L   + + A CG  +   + +VM  S  +   S  K+  +   D +   L + DKE +
Sbjct: 325 PLNEKKVISATCGENYVICLGQVM-NSRLAKLASQKKMLKFQSPDNNNNSLINVDKEGK 382


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 177/357 (49%), Gaps = 21/357 (5%)

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
            VP   ++   L   +IA G +   +V++ G+V++ GE   GRLG GV  +V  P  +  L
Sbjct: 3006 VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3065

Query: 283  KNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
                V+ VA   G  H  A+TL G +++WG G +   G LGHGN  +L  P+ +   L  
Sbjct: 3066 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED---GKLGHGNRTTLDKPRLVEA-LRA 3121

Query: 340  IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
              +  V+CG  H+A ++S G+L+T+G G +G LGHGD ++   P+ V +L G R V+ AC
Sbjct: 3122 KKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRVVQVAC 3181

Query: 400  GV--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
            G     T A+ E             G +F+WGDGD G+LG G  E    P  +  L    
Sbjct: 3182 GSRDAQTLALTE------------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3229

Query: 458  FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD 517
              Q+ CG   ++ALT  G V+T G   Y +LG          +  G L    V  +A G 
Sbjct: 3230 VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGA 3289

Query: 518  YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             H   +T   +VY WG   +G+ G G+T     P+LV  L    V  + CG+S + A
Sbjct: 3290 LHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3346



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/380 (32%), Positives = 190/380 (50%), Gaps = 24/380 (6%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++      P   E+  +L    +A G +    VT  G++F+ G   
Sbjct: 4047 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4106

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGL 318
            GGRLG G     + P L+ +L+++ V+ VA   G  H  A+T  G++Y WG G +   G 
Sbjct: 4107 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED---GK 4163

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
            LGHGN MS   PK +   L G+ V+ ++CG  H+A +T++G + T+G G +G LGHGD  
Sbjct: 4164 LGHGNRMSYDRPKLVEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSE 4222

Query: 379  SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG--KLFTWGDGDRGRL 436
                P+ V++L G R +  ACG               + + C +    +++WGDGD G+L
Sbjct: 4223 DQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGDYGKL 4270

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG- 495
            G G  +   +P  + +L      +V CG   +VALT +G VYT G   + +LG    +  
Sbjct: 4271 GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV 4330

Query: 496  KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
            + P +V     K  +  IA G  H    +   EVYTWG    G+LG G       P LV 
Sbjct: 4331 RRPKKVAALQGKKIIS-IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVA 4389

Query: 556  ALKDKQVKSIVCGTSFTAAI 575
            AL+ K +  + CG++ T A+
Sbjct: 4390 ALQGKHIVKVTCGSAHTLAL 4409



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/333 (34%), Positives = 165/333 (49%), Gaps = 27/333 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+  GE T +G LG G+  +     V +   +P  V    V+    +  GG+HA  +T
Sbjct: 3035 GKVYACGEGT-NGRLGLGVTHN-----VPLPHQLP--VLHQYVVKKVAVHSGGKHALALT 3086

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G+VFSWGE   G+LGHG  + +  P+L++AL+   +  VACG  H+ A++  G++YTW
Sbjct: 3087 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTW 3146

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDG 367
            G     +G LGHG+ ++   P KL   L G  V  V+CG     T  +T  G +F++GDG
Sbjct: 3147 GLG--EYGRLGHGDNVTQLKP-KLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 3203

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             FG LG G      TP E++ L G+  V+  CG   + A+              +G+++T
Sbjct: 3204 DFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTR------------AGEVWT 3251

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WG GD  RLGHG  +    P  +  L       V+ G    +A+T  G VY  G   +GQ
Sbjct: 3252 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3311

Query: 488  LGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYH 519
             G       K P  V G L   FV  +ACG  H
Sbjct: 3312 QGSGNTFVNKKPALVIG-LDAVFVNRVACGSSH 3343



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 150/307 (48%), Gaps = 19/307 (6%)

Query: 223  VPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
            +P  + S   + V+ +A   GG+H   +T +GEV++WGE   G+LGHG       PKL++
Sbjct: 4120 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4179

Query: 281  ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
             L  ++V  +ACG  H+ A+T SG + TWG     +G LGHG+      PK +   L G 
Sbjct: 4180 HLNGMSVADIACGSAHSAAITASGHVLTWGKGR--YGRLGHGDSEDQLRPKLVEA-LLGY 4236

Query: 341  HVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
                ++CG     T  +T    ++++GDG +G LG G       P +++SL GL  V+  
Sbjct: 4237 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4296

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            CG   + A+ +            SG ++TWG GD  RLGHG  +    P  VAAL     
Sbjct: 4297 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4344

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
              ++ G    VA + +G VYT G    GQLGD         R+   L    + ++ CG  
Sbjct: 4345 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4404

Query: 519  HVAVLTS 525
            H   L++
Sbjct: 4405 HTLALST 4411



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/288 (36%), Positives = 150/288 (52%), Gaps = 29/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG          G +M    PK VE    + V +IACG  H+A +T
Sbjct: 4151 GEVYAWGEGE-DGKLG---------HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAIT 4200

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
              G V +WG+   GRLGHG   D   PKL++AL       +AC  G+  T  +T   +++
Sbjct: 4201 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4260

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LG G      LP K+   L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4261 SWG--DGDYGKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4317

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLF 426
             F  LGHG    V  P++V +L+G + +  A G  H  A             CS SG+++
Sbjct: 4318 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEVY 4364

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            TWGD D G+LG G   A   P  VAAL   +  +V+CG + T+AL+T+
Sbjct: 4365 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4412



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 163/333 (48%), Gaps = 33/333 (9%)

Query: 254  VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            V  WG    E+LGG  G    S V  P     +  +    +A G      V+  G +Y  
Sbjct: 2985 VMVWGLNDKEQLGGLKG----SKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYAC 3040

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G   ++ LP +L  P+   +V    +V  G  H   +T  G++F++G
Sbjct: 3041 GEGTN---GRLGLGVTHNVPLPHQL--PVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3095

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+R ++  PR V++L+  +    ACG  H+AA+             S G+L
Sbjct: 3096 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI------------SSQGEL 3143

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V AL      QV+CG   + T+ALT  G V++ G  
Sbjct: 3144 YTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 3203

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G   P  +E +L+   V +I CG      LT   EV+TWGKG   RLGH
Sbjct: 3204 DFGKLGRGGSEGSDTPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3262

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P  +  L+ ++V  +  G     A+
Sbjct: 3263 GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAV 3295



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-----DVSHPKLIDALKNINV 287
             ++ +AC      +++++G++++W      RL           +V+H   I    +   
Sbjct: 569 FQIKQVACCETQMLILSQEGKLYTW------RLAKPEAEPLPMEEVAHEVFISIAGH--- 619

Query: 288 ELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 347
               C   H  A+  + + Y+WG    +   LGHG+  +  +P K+   LE   V SV C
Sbjct: 620 ----CEGRHFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYC 672

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  ++A +T  G L T+G GT+  LGHG+    S P  V +L                 V
Sbjct: 673 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS-------------DHMV 719

Query: 408 VEVMVGSSSSSNC---SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
           V+V +GS  + +    S G +F WGDGD G+LG+G+    L P  V +L  P   +V  G
Sbjct: 720 VDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAG 777

Query: 465 HSLTVALTTTGHVYTMGSP--VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
              ++AL++ G +Y+ G    +  QL +    G    R+   L    + ++A    H   
Sbjct: 778 SQFSLALSSEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLA 837

Query: 523 LTSRTEVYTWGK 534
           L+S  EV+ WG+
Sbjct: 838 LSSSGEVFGWGR 849



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 110/213 (51%), Gaps = 19/213 (8%)

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           ++WG G+  RLGHGD  AR VPT +AAL +     V CG S + A+T  G++ T G   Y
Sbjct: 635 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY 694

Query: 486 GQLGDPKANGK-LPTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGRLGH 542
            +LG   ++ + LPT V   L+ + V ++A   GD H   LTS   V+ WG G  G+LG+
Sbjct: 695 ARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 753

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG-------VDQSM--C 589
           G+ +    P LVE+L   +V+ +  G+ F+ A+     L+ W          V++S+  C
Sbjct: 754 GNCNGSLQPILVESL--PRVQRVFAGSQFSLALSSEGQLYSWGKATCLGHQLVERSVQGC 811

Query: 590 SGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 622
           S  R+  + + KR       + +C   SS   V
Sbjct: 812 SVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEV 844



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 120/257 (46%), Gaps = 30/257 (11%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  ++ +G    G LG   G RI   TP E  SL  LR V+ A G     AV        
Sbjct: 4044 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAVT------- 4094

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKLF  G G  GRLG G  ++  +PT + +L  V      V+ G    +ALTT
Sbjct: 4095 -----PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4149

Query: 474  TGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G VY  G    G+LG   + +   P  VE  L    V +IACG  H A +T+   V TW
Sbjct: 4150 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLTW 4208

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG----- 583
            GKG  GRLGHGD++D+  P LVEAL   +   I CG+     +C+    + W  G     
Sbjct: 4209 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4268

Query: 584  -VDQSMCSGCRIPFNFK 599
             + +    GC++P+  +
Sbjct: 4269 KLGRGGSDGCKLPYKIE 4285



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 122/270 (45%), Gaps = 53/270 (19%)

Query: 181 SGHDDG------DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           +GH +G      DS  + + WG  TG+       HR G   G      VP  + +     
Sbjct: 617 AGHCEGRHFLAIDSNHNAYSWG--TGED------HRLGH--GDTHARAVPTKIAALEQHC 666

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
           VQ++ CG  ++A +T  G + +WG     RLGHG   D S P L+ AL +  V  VA   
Sbjct: 667 VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 726

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS------VS 346
           G+ H+ A+T  G ++ WG  + ++G LG+GN          NG L+ I V S      V 
Sbjct: 727 GDAHSLALTSEGLVFAWG--DGDYGKLGNGN---------CNGSLQPILVESLPRVQRVF 775

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG----DRISVSTPREVDSLKGLRTVRAACGVW 402
            G   +  ++S GQL+++G  T   LGH          S PR V SL+  R V  A  V 
Sbjct: 776 AGSQFSLALSSEGQLYSWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVA 833

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           H  A+             SSG++F WG  D
Sbjct: 834 HCLAL------------SSSGEVFGWGRND 851



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 2/157 (1%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GK++  G+G  GRLG G      +P  +  L +    +V+   G    +ALT  G V++ 
Sbjct: 3035 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3094

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            G    G+LG          R+   L    + ++ACG  H A ++S+ E+YTWG G  GRL
Sbjct: 3095 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 3154

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            GHGD   +  P LV AL  ++V  + CG+     + L
Sbjct: 3155 GHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLAL 3191



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 14/158 (8%)

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS--CGHSLTVALTTTGHVYTM 480
           GKL+TW      RL   + E    P  +  +    F  ++  C     +A+ +  + Y+ 
Sbjct: 588 GKLYTW------RLAKPEAE----PLPMEEVAHEVFISIAGHCEGRHFLAIDSNHNAYSW 637

Query: 481 GSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           G+    +LG    + + +PT++   L ++ V+ + CG  + A +T    + TWG+G   R
Sbjct: 638 GTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 696

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           LGHG++DDR+ P+LV AL D  V  +  G+    ++ L
Sbjct: 697 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 734


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 199/404 (49%), Gaps = 36/404 (8%)

Query: 180  GSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIA 239
            GSG  D  +   VF+WG    D +        G   G K+ +  P   E+   L    I 
Sbjct: 2906 GSGVKDIQT--QVFVWGLNDKDQL--------GGPKGSKIKT--PGINETLSTLKCVQIV 2953

Query: 240  CGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHH 296
             G +    VT+ G++F+ GE   GRLG G+ + +V  P+ + +L    ++ VA   G  H
Sbjct: 2954 GGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRH 3013

Query: 297  TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
              A+T+ G +++WG  +   G LGH + M+   P+ +   L    V  ++CG  H+A + 
Sbjct: 3014 AMALTVDGKVFSWGEGD--DGKLGHFSRMNCDKPRLIEA-LRSKRVRDIACGGSHSAAII 3070

Query: 357  SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            S G L+T+G G +G LGHGD  +   P+ V +L+G R             V++V +GS  
Sbjct: 3071 SNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQR-------------VIQVALGSRD 3117

Query: 417  SSNCS---SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            +   +   SG +++WGDGD G+LG G  E   VP  +  L     CQ+ CG   ++ALT 
Sbjct: 3118 AQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTK 3177

Query: 474  TGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            +G V+T G   Y +LG    A+ + P  VE  L    V  +A G  H   +    +VY W
Sbjct: 3178 SGQVWTWGKGDYFRLGHGTDAHVRKPQLVE-TLKGKKVTHVAVGALHCLSVLDNGQVYAW 3236

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
            G   +G+ G+  T     P+LV+ L+  ++  + CG+S + A C
Sbjct: 3237 GDNDHGQQGNSTTTVNRKPALVQGLEGCKISRVACGSSHSIAWC 3280



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 138/422 (32%), Positives = 206/422 (48%), Gaps = 34/422 (8%)

Query: 195  WGECTGDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQG 252
            WG   G G I G G +  G   GV+     +P + E+   +    +  G +    +T  G
Sbjct: 3932 WG---GSGQIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGDG 3988

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG 310
            +V + G   GGRLG G    V+ P LI++++++ +  VA   G  H  A++  G++Y+WG
Sbjct: 3989 KVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWG 4048

Query: 311  -GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
             G +   G LGHGN      P+ +   L G  V  ++ G  H+A +TS G+L+++G G +
Sbjct: 4049 EGED---GKLGHGNRSPCDRPRAIES-LRGKEVVDIAAGGAHSACITSTGELYSWGKGRY 4104

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK--LFT 427
            G LGHGD    + P+ VD+LKG R    ACG               + + C +    +++
Sbjct: 4105 GRLGHGDSEDQTKPKLVDALKGYRVTDVACG------------SGDAQTLCITDDDSVWS 4152

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGDGD G+LG G  +   VP  + AL      +V CG   +VALT +G VYT G   Y +
Sbjct: 4153 WGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHR 4212

Query: 488  LGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   + + + P R      K  V  IACG  H    T   EVYTWG    G+LG G T+
Sbjct: 4213 LGHGTEDHIRRPRRCTTLQGKKIVS-IACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTN 4271

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG------VDQSMCSGCRIPFNFKR 600
                P LV AL+ K++  + CG++ + A   +K V+       +     S   +P N  R
Sbjct: 4272 AIQRPRLVAALQGKKINRVACGSAHSLAWSTNKPVNAGKLPAQIPMEYNSLQSLPINVLR 4331

Query: 601  KR 602
             R
Sbjct: 4332 NR 4333



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 157/312 (50%), Gaps = 38/312 (12%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG G +RS            P+A+ES    +V +IA GG H+A +T
Sbjct: 4042 GEVYSWGEGE-DGKLGHG-NRSPCDR--------PRAIESLRGKEVVDIAAGGAHSACIT 4091

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              GE++SWG+   GRLGHG   D + PKL+DALK   V  VACG      + ++ D   W
Sbjct: 4092 STGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVW 4151

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
               + ++G LG G      +P K++  L+G+ V  V CG   +  +T +G ++T+G G +
Sbjct: 4152 SWGDGDYGKLGRGGSDGCKVPMKIDA-LQGLGVIKVECGSQFSVALTKSGAVYTWGKGDY 4210

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
              LGHG    +  PR   +L+G + V  ACG  H  A  +            +G+++TWG
Sbjct: 4211 HRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTD------------AGEVYTWG 4258

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            D D G+LG G   A   P  VAAL      +V+CG + ++A +T                
Sbjct: 4259 DNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHSLAWSTN--------------- 4303

Query: 490  DPKANGKLPTRV 501
             P   GKLP ++
Sbjct: 4304 KPVNAGKLPAQI 4315



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 151/319 (47%), Gaps = 30/319 (9%)

Query: 228 ESAVVLDVQNIACG----GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           E + + D++ I       G H   +T +G+V+SWG    G+LGHG       P LI+ L 
Sbjct: 469 EISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELH 528

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
             +V  VACG HH+ A+T SG+++TWG    +FG LG G+   +  P  ++G L G+ V 
Sbjct: 529 GKSVVNVACGSHHSAAITASGELFTWG--RGSFGRLGLGSTEDILTPALVSGLL-GVTVV 585

Query: 344 SVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
            V+CG     T  +   G ++++GDG +G LG G       P+ VD L+GL   R  CG 
Sbjct: 586 DVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGP 645

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            ++AAV            C +G +FTWG+G+  +LGHG +E    P  V  L   +   +
Sbjct: 646 QYSAAV------------CKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSL 693

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
           S G    +A T  G + + G    GQLG+     K        L    +  I C      
Sbjct: 694 SLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEPAFAASLLGKCIIGITC------ 747

Query: 522 VLTSRTEVYTWGKGANGRL 540
              S  + + W + + G +
Sbjct: 748 ---SSAQTFAWSRPSRGTM 763



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 175/369 (47%), Gaps = 39/369 (10%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI-NVELVAC 292
           D+  +AC      ++ + G V+               ++ + P+ +  +  + ++E++  
Sbjct: 435 DIIQVACSSNSLLILLRTGRVYKM-------------TNSAEPQSMHEISTLADIEIIKL 481

Query: 293 GEH----HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
             H    H  A+T  GD+Y+WG  N +FG LGHG+ ++   P  +N  L G  V +V+CG
Sbjct: 482 AAHSEGSHCLALTSEGDVYSWG--NGDFGKLGHGDTVTCDSPMLIN-ELHGKSVVNVACG 538

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             H+A +T++G+LFT+G G+FG LG G    + TP  V  L G+  V  ACG      + 
Sbjct: 539 SHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTI- 597

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                    +   +G +++WGDG+ G+LG G  E    P  V  L   +  +V CG   +
Sbjct: 598 ---------ALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYS 648

Query: 469 VALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
            A+   G V+T G+    +LG   + + + P +VE  L    V  ++ G +H    T   
Sbjct: 649 AAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVE-TLAGKHVTSLSLGSHHCLATTEEG 707

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQS 587
           E+ +WG+   G+LG G T  +  P+   +L  K +  I C ++ T A     W      +
Sbjct: 708 ELLSWGRNDKGQLGEGHTGLKAEPAFAASLLGKCIIGITCSSAQTFA-----WSRPSRGT 762

Query: 588 MCSGCRIPF 596
           M    RIPF
Sbjct: 763 MIP-MRIPF 770



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 147/286 (51%), Gaps = 27/286 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG   H S      +M+   P+ +E+     V++IACGG H+A + 
Sbjct: 3021 GKVFSWGE-GDDGKLG---HFS------RMNCDKPRLIEALRSKRVRDIACGGSHSAAII 3070

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              G++++WG    GRLGHG ++    PKL+ AL+   V  VA G  +  T A+T SG +Y
Sbjct: 3071 SNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVY 3130

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G      +P  +   L G+ V  + CG   +  +T +GQ++T+G G
Sbjct: 3131 SWG--DGDFGKLGRGGSEGCSVPHPIER-LNGVGVCQIECGAQFSLALTKSGQVWTWGKG 3187

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  P+ V++LKG +    A G  H  +V++            +G+++ 
Sbjct: 3188 DYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLD------------NGQVYA 3235

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
            WGD D G+ G+        P  V  L      +V+CG S ++A  T
Sbjct: 3236 WGDNDHGQQGNSTTTVNRKPALVQGLEGCKISRVACGSSHSIAWCT 3281



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 145/300 (48%), Gaps = 29/300 (9%)

Query: 174 VSSSSQGSGHDDGDSLGDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
           +++ S+GS      S GDV+ WG   GD G LG G         V  DS  P  +     
Sbjct: 481 LAAHSEGSHCLALTSEGDVYSWG--NGDFGKLGHG-------DTVTCDS--PMLINELHG 529

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
             V N+ACG  H+A +T  GE+F+WG    GRLG G   D+  P L+  L  + V  VAC
Sbjct: 530 KSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVAC 589

Query: 293 --GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
             G+  T A+  +G +Y+WG  +  +G LG G       P KL   L+G+ V+ V CGP 
Sbjct: 590 GSGDAQTIALADTGSVYSWG--DGEYGKLGRGGSEGCKAP-KLVDKLQGLDVTRVYCGPQ 646

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           ++A V   G +FT+G+G    LGHG    V  PR+V++L G      + G  H  A  E 
Sbjct: 647 YSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTE- 705

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                       G+L +WG  D+G+LG G    +  P   A+L+      ++C  + T A
Sbjct: 706 -----------EGELLSWGRNDKGQLGEGHTGLKAEPAFAASLLGKCIIGITCSSAQTFA 754



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 14/211 (6%)

Query: 404 TAAVVEV--MVGSSSSSNC----SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           T A +E+  +   S  S+C    S G +++WG+GD G+LGHGD      P  +  L   +
Sbjct: 472 TLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKS 531

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACG 516
              V+CG   + A+T +G ++T G   +G+LG       L P  V G L    V+ +ACG
Sbjct: 532 VVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVD-VACG 590

Query: 517 --DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             D     L     VY+WG G  G+LG G ++    P LV+ L+   V  + CG  ++AA
Sbjct: 591 SGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAA 650

Query: 575 IC----LHKWVSGVDQSMCSGCRIPFNFKRK 601
           +C    +  W +G    +  G      F R+
Sbjct: 651 VCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQ 681



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 34/277 (12%)

Query: 340  IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
            +    V CG   + V     Q+F +G      LG      + TP   ++L  L+ V+   
Sbjct: 2898 VMAKKVKCG---SGVKDIQTQVFVWGLNDKDQLGGPKGSKIKTPGINETLSTLKCVQ--- 2951

Query: 400  GVWHTAAVVEVMVGSSSSSNCSS--GKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEP 456
                       +VG S S  C +  GKLF  G+   GRLG G     +  P  + +L + 
Sbjct: 2952 -----------IVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQY 3000

Query: 457  NFCQVSC--GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEI 513
               +V+   G    +ALT  G V++ G    G+LG   + N   P  +E   +K  V +I
Sbjct: 3001 VIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKR-VRDI 3059

Query: 514  ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT---- 569
            ACG  H A + S  ++YTWG G  GRLGHGD   +  P LV+AL+ ++V  +  G+    
Sbjct: 3060 ACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQ 3119

Query: 570  --SFTAAICLHKWVSG----VDQSMCSGCRIPFNFKR 600
              + T +  ++ W  G    + +    GC +P   +R
Sbjct: 3120 TLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIER 3156



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 89/182 (48%), Gaps = 22/182 (12%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSS-----AVSSSSQGSGHDDGDSLGD---VFIWGECTGD 201
           GS GR G   G + D    +L S      V   + GSG     +L D   V+ WG    D
Sbjct: 557 GSFGRLG--LGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWG----D 610

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           G  G  + R GS  G K     PK V+    LDV  + CG +++A V K G VF+WG   
Sbjct: 611 GEYGK-LGRGGS-EGCK----APKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGE 664

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           G +LGHG +  V  P+ ++ L   +V  ++ G HH  A T  G++ +WG +  + G LG 
Sbjct: 665 GYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRN--DKGQLGE 722

Query: 322 GN 323
           G+
Sbjct: 723 GH 724



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 20/160 (12%)

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN----FCQVSCGHSLTVALTTTG 475
           C + +LF WG      L   D      PT +     PN      QV+C  +  + L  TG
Sbjct: 402 CGAQELFAWG-----WLSTSDATCHNTPTTIPL---PNDLDDIIQVACSSNSLLILLRTG 453

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VY M +       +P++  ++ T  + ++ K           H   LTS  +VY+WG G
Sbjct: 454 RVYKMTNS-----AEPQSMHEISTLADIEIIKLAAHSEGS---HCLALTSEGDVYSWGNG 505

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G+LGHGDT   + P L+  L  K V ++ CG+  +AAI
Sbjct: 506 DFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAI 545


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 174/356 (48%), Gaps = 19/356 (5%)

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
            VP   ++   L   +IA G +   +V++ G+V++ GE   GRLG GV  +V  P  +  L
Sbjct: 2664 VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 2723

Query: 283  KNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
                V+ VA   G  H  A+TL G +++WG      G LGHGN  +L  P+ +   L   
Sbjct: 2724 HQYVVKKVAVHSGGKHALALTLDGKVFSWG--EGEDGKLGHGNRTTLDKPRLVEA-LRAK 2780

Query: 341  HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
             +  V+CG  H+A ++S G+L+T+G G +G LGHGD  +   P+ V +L G R V+ ACG
Sbjct: 2781 KIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACG 2840

Query: 401  V--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
                 T A+ E             G +F+WGDGD G+LG G  E    P  +  L     
Sbjct: 2841 SRDAQTLALTE------------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV 2888

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
             Q+ CG   ++ALT  G V+T G   Y +LG          +  G L    V  +A G  
Sbjct: 2889 VQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 2948

Query: 519  HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            H   +T   +VY WG   +G+ G G+T     P+LV  L    V  + CG+S + A
Sbjct: 2949 HCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3004



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 164/333 (49%), Gaps = 27/333 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+  GE T +G LG G+  +     V +   +P  V    V+    +  GG+HA  +T
Sbjct: 2693 GKVYACGEGT-NGRLGLGVTHN-----VPLPHQLP--VLHQYVVKKVAVHSGGKHALALT 2744

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G+VFSWGE   G+LGHG  + +  P+L++AL+   +  VACG  H+ A++  G++YTW
Sbjct: 2745 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTW 2804

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDG 367
            G     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++GDG
Sbjct: 2805 GLG--EYGRLGHGDNTTQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 2861

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             FG LG G      TP E++ L G+  V+  CG   + A+              +G+++T
Sbjct: 2862 DFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTR------------AGEVWT 2909

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WG GD  RLGHG  +    P  +  L       V+ G    +A+T  G VY  G   +GQ
Sbjct: 2910 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 2969

Query: 488  LGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYH 519
             G       K P  V G L   FV  +ACG  H
Sbjct: 2970 QGSGNTFVNKKPALVIG-LDAVFVNRVACGSSH 3001



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 163/333 (48%), Gaps = 33/333 (9%)

Query: 254  VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            V  WG    E+LGG  G    S V  P     +  +    +A G      V+  G +Y  
Sbjct: 2643 VMVWGLNDKEQLGGLKG----SKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYAC 2698

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G   ++ LP +L  P+   +V    +V  G  H   +T  G++F++G
Sbjct: 2699 GEGTN---GRLGLGVTHNVPLPHQL--PVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 2753

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+R ++  PR V++L+  +    ACG  H+AA+             S G+L
Sbjct: 2754 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI------------SSQGEL 2801

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V AL      QV+CG   + T+ALT  G V++ G  
Sbjct: 2802 YTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 2861

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G   P  +E +L+   V +I CG      LT   EV+TWGKG   RLGH
Sbjct: 2862 DFGKLGRGGSEGSDTPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 2920

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P  +  L+ ++V  +  G     A+
Sbjct: 2921 GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAV 2953



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 143/308 (46%), Gaps = 33/308 (10%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA- 291
             ++ +AC      +++++G++++W      RL      +     + +   ++ + +   
Sbjct: 226 FQIKQVACCETQMLILSQEGKLYTW------RLA---KPEAEPLPMEEVAHDVFISIAGH 276

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           C   H  A+  + + Y+WG    +   LGHG+  +  +P K+   LE   V SV CG  +
Sbjct: 277 CEGRHFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSY 333

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +A +T  G L T+G GT+  LGHG+    S P  V +L                 VV+V 
Sbjct: 334 SAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS-------------DHMVVDVA 380

Query: 412 VGSSSSSNC---SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
           +GS  + +    S G +F WGDGD G+LG+G+    L P  V +L  P   +V  G   +
Sbjct: 381 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFS 438

Query: 469 VALTTTGHVYTMGSP--VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           VAL++ G +YT G    +  QL +    G    R+   L    + ++A    H   L+S 
Sbjct: 439 VALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSS 498

Query: 527 TEVYTWGK 534
            EV+ WG+
Sbjct: 499 GEVFGWGR 506



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 110/213 (51%), Gaps = 19/213 (8%)

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           ++WG G+  RLGHGD  AR VPT +AAL +     V CG S + A+T  G++ T G   Y
Sbjct: 292 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY 351

Query: 486 GQLGDPKANGK-LPTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGRLGH 542
            +LG   ++ + LPT V   L+ + V ++A   GD H   LTS   V+ WG G  G+LG+
Sbjct: 352 ARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 410

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG-------VDQSM--C 589
           G+ +    P LVE+L   +V+ +  G+ F+ A+     L+ W          V++S+  C
Sbjct: 411 GNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGC 468

Query: 590 SGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 622
           S  R+  + + KR       + +C   SS   V
Sbjct: 469 SVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEV 501



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 117/268 (43%), Gaps = 53/268 (19%)

Query: 191 DVFI--WGECTGDGILG------------GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQ 236
           DVFI   G C G   L             G  HR G   G      VP  + +     VQ
Sbjct: 268 DVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGH--GDTHARAVPTKIAALEQHCVQ 325

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GE 294
           ++ CG  ++A +T  G + +WG     RLGHG   D S P L+ AL +  V  VA   G+
Sbjct: 326 SVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGD 385

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS------VSCG 348
            H+ A+T  G ++ WG  + ++G LG+GN          NG L+ I V S      V  G
Sbjct: 386 AHSLALTSEGLVFAWG--DGDYGKLGNGN---------CNGSLQPILVESLPRVQRVFAG 434

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHG----DRISVSTPREVDSLKGLRTVRAACGVWHT 404
              +  ++S GQL+T+G  T   LGH          S PR V SL+  R V  A  V H 
Sbjct: 435 SQFSVALSSEGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 492

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            A+             SSG++F WG  D
Sbjct: 493 LAL------------SSSGEVFGWGRND 508



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 2/157 (1%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GK++  G+G  GRLG G      +P  +  L +    +V+   G    +ALT  G V++ 
Sbjct: 2693 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 2752

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            G    G+LG          R+   L    + ++ACG  H A ++S+ E+YTWG G  GRL
Sbjct: 2753 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 2812

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            GHGD   +  P LV AL  ++V  + CG+     + L
Sbjct: 2813 GHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLAL 2849



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 14/158 (8%)

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS--CGHSLTVALTTTGHVYTM 480
           GKL+TW      RL   + E    P  +  +    F  ++  C     +A+ +  + Y+ 
Sbjct: 245 GKLYTW------RLAKPEAE----PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSW 294

Query: 481 GSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           G+    +LG    + + +PT++   L ++ V+ + CG  + A +T    + TWG+G   R
Sbjct: 295 GTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 353

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           LGHG++DDR+ P+LV AL D  V  +  G+    ++ L
Sbjct: 354 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 391


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 183/377 (48%), Gaps = 25/377 (6%)

Query: 203  ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG 262
            + G G  R G  A V     VP+  +S    + + + CG     ++   G V S GE   
Sbjct: 754  LFGAG--RHGQLAEVGSGVLVPQLTKS--FHEARKVVCGQNCTFIINNNGVVLSCGEGSY 809

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GRLG G   D +    I AL+   V+ +A     + H  A+T +G++++WG  +  +G L
Sbjct: 810  GRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGD--YGKL 867

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+++   L G  V  V+CG  H+AVVT  G+LFTFG G +G LGHG   +
Sbjct: 868  GHGNSDRQRRPRQIEA-LRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTN 926

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW--GDGDRGRLG 437
               P  V +L+     + ACG+ HT  V             S   L  W  GDGD G+LG
Sbjct: 927  KKIPERVMALENYIIGQVACGLNHTVIV-------------SQDNLTVWACGDGDYGKLG 973

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL 497
             G   A+  PT +  L      ++SCG   T ALT  G ++  G        + + +   
Sbjct: 974  IGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCETRTSPSF 1033

Query: 498  PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
              +V   L+ + + +I+ G  H   LTS+  VYTWG   +G+LG G T+    P+LVE+L
Sbjct: 1034 NPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESL 1093

Query: 558  KDKQVKSIVCGTSFTAA 574
              K ++ I  G + +AA
Sbjct: 1094 SGKNIRQISAGRTHSAA 1110



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 126/257 (49%), Gaps = 23/257 (8%)

Query: 345  VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW-- 402
            V CG   T ++ + G + + G+G++G LG G+    +    + +L+G    + A      
Sbjct: 785  VVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSD 844

Query: 403  -HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
             H  A+ E            +G++F+WGDGD G+LGHG+ + +  P  + AL      QV
Sbjct: 845  GHAIALTE------------NGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQV 892

Query: 462  SCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
            +CG   +  +T  G ++T G   YG+LG     N K+P RV   L    + ++ACG  H 
Sbjct: 893  ACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMA-LENYIIGQVACGLNH- 950

Query: 521  AVLTSRTEVYTW--GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL- 577
             V+ S+  +  W  G G  G+LG G T  +  P+ +E L    +K I CG  FTAA+   
Sbjct: 951  TVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWD 1010

Query: 578  -HKWVSGVDQSMCSGCR 593
               ++ G D+ MC  C 
Sbjct: 1011 GKLFMFGQDR-MCGNCE 1026



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 165/353 (46%), Gaps = 43/353 (12%)

Query: 141  GSVNSLSSGGSD--GRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSL-GDVFIWGE 197
            GS   L  G SD   R  H+  L G   +      +++S+   GH    +  G+VF WG+
Sbjct: 807  GSYGRLGQGNSDDSNRLTHISALQGFIVK-----QLATSTGSDGHAIALTENGEVFSWGD 861

Query: 198  CTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFS 256
              GD G LG G                P+ +E+    +V  +ACG +H+A+VT  G++F+
Sbjct: 862  --GDYGKLGHGNSDRQRR---------PRQIEALRGQEVVQVACGFKHSAVVTIDGKLFT 910

Query: 257  WGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 316
            +G    GRLGHG  ++   P+ + AL+N  +  VACG +HT  V+   ++  W   + ++
Sbjct: 911  FGYGDYGRLGHGSTTNKKIPERVMALENYIIGQVACGLNHTVIVS-QDNLTVWACGDGDY 969

Query: 317  GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
            G LG G   +   P K+   L  + +  +SCG   TA +T  G+LF FG     + G+ +
Sbjct: 970  GKLGIGGTSAKTSPTKIE-VLSRVGIKKISCGAQFTAALTWDGKLFMFGQDR--MCGNCE 1026

Query: 377  -RISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRG 434
             R S S  P+ V +L     +  + G  HT A+             S G ++TWG    G
Sbjct: 1027 TRTSPSFNPQVVTALSSHHIIDISVGAEHTIALT------------SKGIVYTWGSNTDG 1074

Query: 435  RLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT----TGHVYTMGSP 483
            +LG G       PT V +L   N  Q+S G + + A +      GH   +G+P
Sbjct: 1075 QLGLGHTNHVQEPTLVESLSGKNIRQISAGRTHSAAWSCEHDDAGHTL-LGTP 1126


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 186/376 (49%), Gaps = 40/376 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+ V S   L ++ I CG  H   +   G++ SWG    G+LGH   S  S P +ID L 
Sbjct: 100 PQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDELA 159

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +  V+ VACG   + A+   G +YTWG   CN +G LG G+  S  +P+ L   +   HV
Sbjct: 160 SQRVKEVACGVAFSAALMEGGQLYTWG---CNRYGQLGQGDRTSSAIPRMLPS-MNHRHV 215

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGV 401
             ++CG  H  V+T++  ++T+G+ ++G LGHG R      P+ V  + GL   +   G 
Sbjct: 216 HLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGE 275

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL-VEPNFCQ 460
            H+  +             S G ++TWG GD G+LGHGD E++ +PT ++ L  +     
Sbjct: 276 NHSCVMT------------SFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASL 323

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGD------PKANGKLPTRVEGKLTKNF----- 509
           +  G    +A+T +G VY+ G   +GQLG        K+N + P+ V      +F     
Sbjct: 324 IVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSN-RFPSDVISPKIISFFAASE 382

Query: 510 ------VEEIACGDYHVAVLTSRTE-VYTWGKGANGRLGHG--DTDDRNFPSLVEALKDK 560
                 +  I+CG +HV  +T + + ++ WG+G +G+LG    DT  R  P  V+ +K  
Sbjct: 383 EHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGM 442

Query: 561 QVKSIVCGTSFTAAIC 576
            V +  C  + +  + 
Sbjct: 443 IVLAAACSENHSVVVA 458



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 182/402 (45%), Gaps = 53/402 (13%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           D+ G +  WG     G LG   H S S+      S  P  ++      V+ +ACG   +A
Sbjct: 125 DASGKIRSWGRGE-SGQLG---HASFSH------SSTPSIIDELASQRVKEVACGVAFSA 174

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
            + + G++++WG    G+LG G  +  + P+++ ++ + +V L+ACG  H   +T S D+
Sbjct: 175 ALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDV 234

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           YTWG  N ++G LGHG      L  K    + G+ +  +  G  H+ V+TS G ++T+G 
Sbjct: 235 YTWG--NNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGR 292

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G FG LGHGD  S   P  +  L              T A + V       +   SG ++
Sbjct: 293 GDFGQLGHGDMESKDIPTLLSPLDP-----------KTQASLIVSGADFIMAMTYSGAVY 341

Query: 427 TWGDGDRGRLGHG-----DKEARLVPTCVAALVEPNFC-----------QVSCGHSLTVA 470
           +WG    G+LGHG      K  R     ++  +   F             +SCG    +A
Sbjct: 342 SWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLA 401

Query: 471 LTTTGH-VYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNF-VEEIACGDYHVAVLTSR- 526
           +T     ++  G   +GQLG DP+     P   E K  K   V   AC + H  V+ +  
Sbjct: 402 ITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMP 461

Query: 527 -------TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 561
                   +V++WG+G+ G+LG+G       P + E ++D Q
Sbjct: 462 GSGPKGDMKVFSWGRGSFGQLGYGSG---KVPVMKETVQDNQ 500



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 93/206 (45%), Gaps = 17/206 (8%)

Query: 383 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE 442
           P+EV SL GL      CG  H  A+             +SGK+ +WG G+ G+LGH    
Sbjct: 100 PQEVVSLAGLSIKLITCGSDHVLAL------------DASGKIRSWGRGESGQLGHASFS 147

Query: 443 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVE 502
               P+ +  L      +V+CG + + AL   G +YT G   YGQLG          R+ 
Sbjct: 148 HSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRML 207

Query: 503 GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQ 561
             +    V  +ACG  H+ VLT+  +VYTWG  + G+LGHG        P  V  +    
Sbjct: 208 PSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLD 267

Query: 562 VKSIVCGTSFTAAIC----LHKWVSG 583
           +K IV G + +  +     ++ W  G
Sbjct: 268 IKQIVAGENHSCVMTSFGDIYTWGRG 293


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/376 (34%), Positives = 193/376 (51%), Gaps = 18/376 (4%)

Query: 203 ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           ILG G +  G   GV+     +P   E+   L    +  G +    VT  G+V++ G   
Sbjct: 583 ILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGYGA 642

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVE--LVACGEHHTCAVTLSGDMYTWGGSNCNFGLL 319
           GGRLG G    VS P L+++L+++ ++  +V  G  H  A++  G++Y+WG  +   G L
Sbjct: 643 GGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGD--DGKL 700

Query: 320 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           GHGN+ S   P+ +   L G  V  V+CG  H+A +T++G+L+T+G G +G LGHGD   
Sbjct: 701 GHGNKSSCERPRVIES-LRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDD 759

Query: 380 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
              P++V++L G R    ACG      +        +  +C    +++WGDGD G+LG G
Sbjct: 760 QLRPKKVEALSGWRVRCVACGSGDAQTLC------VTDDDC----VWSWGDGDYGKLGRG 809

Query: 440 DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLP 498
             +   VP  V  L      +V CG   +VALT +G VYT G   Y +LG     + + P
Sbjct: 810 GSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHVRRP 869

Query: 499 TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
            RV     K  +  IA G  H    T   EVYTWG    G+LG G  +  + P LV AL+
Sbjct: 870 KRVAALQGKKVIC-IAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIHKPRLVAALQ 928

Query: 559 DKQVKSIVCGTSFTAA 574
            K++  + CG++ T A
Sbjct: 929 GKKINRVSCGSAHTVA 944



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 146/284 (51%), Gaps = 23/284 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+V+ WGE   DG LG G   S            P+ +ES    +V ++ACGG H+A +T
Sbjct: 687 GEVYSWGE-GDDGKLGHGNKSSCER---------PRVIESLRGKEVVDVACGGAHSACIT 736

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             GE+++WG+   GRLGHG   D   PK ++AL    V  VACG      + ++ D   W
Sbjct: 737 ASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVW 796

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
              + ++G LG G      +P +++  L+G+ V  V CG   +  +T++G ++T+G G +
Sbjct: 797 SWGDGDYGKLGRGGSDGCKVPLRVD-LLQGMGVIRVECGSQFSVALTASGSVYTWGKGDY 855

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
             LGHG    V  P+ V +L+G + +  A G  H  A  +            +G+++TWG
Sbjct: 856 HRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTD------------TGEVYTWG 903

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
           D D G+LG G   A   P  VAAL      +VSCG + TVA +T
Sbjct: 904 DNDEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGSAHTVAWST 947



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 161/350 (46%), Gaps = 42/350 (12%)

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           E  T +   SG +  WG ++   G LG   G ++ L +P +    L  I V     G   
Sbjct: 571 EDWTLSWGWSGTILGWGHNH--RGQLGGVEGAKVKLPMPCEALSALRPIQVVG---GEQT 625

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
              VT+ G+++  G G  G LG G   SVS P  ++SL+ +               ++ +
Sbjct: 626 LFAVTADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHV--------------FIKKV 671

Query: 412 VGSSSSSNC----SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
           V +S   +C    + G++++WG+GD G+LGHG+K +   P  + +L       V+CG + 
Sbjct: 672 VVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAH 731

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACG--DYHVAVLT 524
           +  +T +G +YT G   YG+LG   ++ +L P +VE  L+   V  +ACG  D     +T
Sbjct: 732 SACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEA-LSGWRVRCVACGSGDAQTLCVT 790

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC-------- 576
               V++WG G  G+LG G +D    P  V+ L+   V  + CG+ F+ A+         
Sbjct: 791 DDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTW 850

Query: 577 ----LHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 622
                H+   G D  +    R+    + K+  C   G ++C  C+    V
Sbjct: 851 GKGDYHRLGHGTDDHVRRPKRVA-ALQGKKVICIAVGSLHCVACTDTGEV 899


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 174/356 (48%), Gaps = 19/356 (5%)

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
            VP   ++   L   +IA G +   +V++ G+V++ GE   GRLG GV  +V  P  +  L
Sbjct: 755  VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 814

Query: 283  KNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
                V+ VA   G  H  A+TL G +++WG      G LGHGN  +L  P+ +   L   
Sbjct: 815  HQYVVKKVAVHSGGKHALALTLDGKVFSWG--EGEDGKLGHGNRTTLDKPRLVEA-LRAK 871

Query: 341  HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
             +  V+CG  H+A ++S G+L+T+G G +G LGHGD  +   P+ V +L G R V+ ACG
Sbjct: 872  KIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACG 931

Query: 401  V--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
                 T A+ E             G +F+WGDGD G+LG G  E    P  +  L     
Sbjct: 932  SRDAQTLALTE------------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV 979

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
             Q+ CG   ++ALT  G V+T G   Y +LG          +  G L    V  +A G  
Sbjct: 980  VQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 1039

Query: 519  HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            H   +T   +VY WG   +G+ G G+T     P+LV  L    V  + CG+S + A
Sbjct: 1040 HCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 1095



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/379 (32%), Positives = 187/379 (49%), Gaps = 22/379 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++      P   E+  +L    +A G +    VT  G++F+ G   
Sbjct: 1799 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 1858

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G     + P L+ +L+++ V+ VA   G  H  A+T  G++Y WG      G L
Sbjct: 1859 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWG--EGEDGKL 1916

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN MS   PK L   L G+ V+ ++CG  H+A +T++G + T+G G +G LGHGD   
Sbjct: 1917 GHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED 1975

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 1976 QLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGDYGKLG 2023

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   +P  + +L      +V CG   +VALT +G VYT G   + +LG    +  +
Sbjct: 2024 RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVR 2083

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V     K  +  IA G  H    +   EVYTWG    G+LG G       P LV A
Sbjct: 2084 RPKKVAALQGKKIIS-IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA 2142

Query: 557  LKDKQVKSIVCGTSFTAAI 575
            L+ K +  + CG++ T A+
Sbjct: 2143 LQGKHIVKVTCGSAHTLAL 2161



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 164/333 (49%), Gaps = 27/333 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+  GE T +G LG G+  +     V +   +P  V    V+    +  GG+HA  +T
Sbjct: 784  GKVYACGEGT-NGRLGLGVTHN-----VPLPHQLP--VLHQYVVKKVAVHSGGKHALALT 835

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G+VFSWGE   G+LGHG  + +  P+L++AL+   +  VACG  H+ A++  G++YTW
Sbjct: 836  LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTW 895

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDG 367
            G     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++GDG
Sbjct: 896  GLG--EYGRLGHGDNATQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 952

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             FG LG G      TP E++ L G+  V+  CG   + A+              +G+++T
Sbjct: 953  DFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTR------------AGEVWT 1000

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WG GD  RLGHG  +    P  +  L       V+ G    +A+T  G VY  G   +GQ
Sbjct: 1001 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 1060

Query: 488  LGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYH 519
             G       K P  V G L   FV  +ACG  H
Sbjct: 1061 QGSGNTFVNKKPALVIG-LDAVFVNRVACGSSH 1092



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 150/307 (48%), Gaps = 19/307 (6%)

Query: 223  VPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
            +P  + S   + V+ +A   GG+H   +T +GEV++WGE   G+LGHG       PKL++
Sbjct: 1872 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 1931

Query: 281  ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
             L  ++V  +ACG  H+ A+T SG + TWG     +G LGHG+      PK +   L G 
Sbjct: 1932 HLNGMSVADIACGSAHSAAITASGHVLTWG--KGRYGRLGHGDSEDQLRPKLVEA-LLGY 1988

Query: 341  HVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
                ++CG     T  +T    ++++GDG +G LG G       P +++SL GL  V+  
Sbjct: 1989 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 2048

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            CG   + A+ +            SG ++TWG GD  RLGHG  +    P  VAAL     
Sbjct: 2049 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 2096

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
              ++ G    VA + +G VYT G    GQLGD         R+   L    + ++ CG  
Sbjct: 2097 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 2156

Query: 519  HVAVLTS 525
            H   L++
Sbjct: 2157 HTLALST 2163



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/288 (36%), Positives = 150/288 (52%), Gaps = 29/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG          G +M    PK VE    + V +IACG  H+A +T
Sbjct: 1903 GEVYAWGEGE-DGKLG---------HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAIT 1952

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
              G V +WG+   GRLGHG   D   PKL++AL       +AC  G+  T  +T   +++
Sbjct: 1953 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 2012

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LG G      LP K+   L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 2013 SWG--DGDYGKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKG 2069

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLF 426
             F  LGHG    V  P++V +L+G + +  A G  H  A             CS SG+++
Sbjct: 2070 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEVY 2116

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            TWGD D G+LG G   A   P  VAAL   +  +V+CG + T+AL+T+
Sbjct: 2117 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 2164



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 163/333 (48%), Gaps = 33/333 (9%)

Query: 254  VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            V  WG    E+LGG  G    S V  P     +  +    +A G      V+  G +Y  
Sbjct: 734  VMVWGLNDKEQLGGLKG----SKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYAC 789

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G   ++ LP +L  P+   +V    +V  G  H   +T  G++F++G
Sbjct: 790  GEGTN---GRLGLGVTHNVPLPHQL--PVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 844

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+R ++  PR V++L+  +    ACG  H+AA+             S G+L
Sbjct: 845  EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI------------SSQGEL 892

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V AL      QV+CG   + T+ALT  G V++ G  
Sbjct: 893  YTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 952

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G   P  +E +L+   V +I CG      LT   EV+TWGKG   RLGH
Sbjct: 953  DFGKLGRGGSEGSDTPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 1011

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P  +  L+ ++V  +  G     A+
Sbjct: 1012 GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAV 1044



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 120/257 (46%), Gaps = 30/257 (11%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  ++ +G    G LG   G RI   TP E  SL  LR V+ A G     AV        
Sbjct: 1796 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAVT------- 1846

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKLF  G G  GRLG G  ++  +PT + +L  V      V+ G    +ALTT
Sbjct: 1847 -----PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 1901

Query: 474  TGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G VY  G    G+LG   + +   P  VE  L    V +IACG  H A +T+   V TW
Sbjct: 1902 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLTW 1960

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG----- 583
            GKG  GRLGHGD++D+  P LVEAL   +   I CG+     +C+    + W  G     
Sbjct: 1961 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 2020

Query: 584  -VDQSMCSGCRIPFNFK 599
             + +    GC++P+  +
Sbjct: 2021 KLGRGGSDGCKLPYKIE 2037



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 2/157 (1%)

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
           GK++  G+G  GRLG G      +P  +  L +    +V+   G    +ALT  G V++ 
Sbjct: 784 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 843

Query: 481 GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
           G    G+LG          R+   L    + ++ACG  H A ++S+ E+YTWG G  GRL
Sbjct: 844 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 903

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           GHGD   +  P LV AL  ++V  + CG+     + L
Sbjct: 904 GHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLAL 940


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 191/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3967 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4026

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 4027 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 4084

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L G  V  ++ G  H+A +T+AG+L+T+G G +G LGHGD   
Sbjct: 4085 GHGNRSPCDRPRVIES-LRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSED 4143

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 4144 QLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4191

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4192 RGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4251

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4252 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4310

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 4311 LQGKKINRVACGSAHTLA 4328



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 191/393 (48%), Gaps = 33/393 (8%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2965 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTAE 3014

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFS 3074

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3075 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3181

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T     +   
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCLA 3241

Query: 489  GDPKANGKLPTRVEGKLTKNFV----EEIACGDY---HVAVLTSRTEVYTWGKGANGRLG 541
                    L      K++  FV        C  Y   ++  +    +VY WG   +G+ G
Sbjct: 3242 VXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQG 3301

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            +G T     P+LV  L+ +++  + CG+S + A
Sbjct: 3302 NGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3334



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 162/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES    +V +IA GG H+A 
Sbjct: 4069 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGTEVVDIAAGGAHSAC 4118

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  GE+++WG+   GRLGHG   D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 4119 ITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT 4178

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V+ V CG   +  +T +G ++T+G G
Sbjct: 4179 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGVGVTKVECGSQFSVALTKSGAVYTWGKG 4237

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4238 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4285

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4286 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4332

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P   GKLP++V   +  N ++EI
Sbjct: 4333 --KPANAGKLPSQV--PMEYNHLQEI 4354



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 167/332 (50%), Gaps = 40/332 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV SWG      LG    ++VS P   +AL N+ V  VAC E     ++ +G +YT   +
Sbjct: 424 EVISWG-----LLGWKYYANVSGPIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDGTFG 370
           N   G            P+ + G L   ++  ++  P   H   +++  +LF++G G  G
Sbjct: 479 NNTLG------------PQLVQG-LASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLRT----VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD +S+  P+ V +L G +T    +  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAIT------------ADGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E + VP  V  L       VSCG   + T+++T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    + ++ CG      +T   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             +   +P ++  L+ K+V  +  G++   A+
Sbjct: 693 TEEHVRYPKIMNGLQGKKVVDVAVGSTHCLAL 724



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 192/384 (50%), Gaps = 46/384 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P   E+   L V  +AC  +   ++++ G++++             +++   P+L+  L 
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYT----------QAYNNNTLGPQLVQGLA 491

Query: 284 NINVELVAC---GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK---KLNGPL 337
           + N+  +A    G+H+  A++ + ++++WG  +   G LGHG+ +SL  PK    L+G  
Sbjct: 492 SRNIVKIAAHPDGQHY-LALSATSELFSWGCGDG--GRLGHGDTVSLEEPKLVSALSGKQ 548

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
            G  V  ++CG  ++A +T+ G+L+T+G G +G LGHG     + P  V  LKGL+ V  
Sbjct: 549 TGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDV 608

Query: 398 ACGV--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
           +CG     T +V E            +G++++WGDGD G+LG G  +    P  +  L +
Sbjct: 609 SCGSGDAQTLSVTE------------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIA 514
            +  +V CG   ++A+T  G VY+ G     +LG   + + + P  + G   K  V+ +A
Sbjct: 657 LDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVD-VA 715

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFPSLVEALKDKQVKSIVCGTSFT 572
            G  H   LT   EVY+W  G+N +  H DT    +  PS++  L  K +  I CG + +
Sbjct: 716 VGSTHCLALTESGEVYSW--GSNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCGPAQS 773

Query: 573 AAICLHKWVSGVDQSMCSGCRIPF 596
            A     W S  + S+  G R+PF
Sbjct: 774 FA-----WSSCSEWSI--GLRVPF 790



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 158/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4024

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 4025 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4081

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G   V  A G  H+A +             ++G+L+TWG
Sbjct: 4082 GKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACIT------------AAGELYTWG 4129

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGHGD E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4130 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4189

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4190 LGRGGSDGCKVPMKIDS-LTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4248

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4249 HVRRPRQVQGLQGKKVIAIATGS 4271



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 153/336 (45%), Gaps = 63/336 (18%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3015 GKVYACGEAT-NGRLGLGIS-SGTVP-------IPRQITALSNYVVKKVAVHSGGRHATA 3065

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3066 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3125

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3126 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3182

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG------------VW------HTAAV 407
            DG FG LG G     + P+ ++ L G    +  CG            VW      H  AV
Sbjct: 3183 DGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCLAV 3242

Query: 408  -----------------VEVMVGSSSSSNCS------------SGKLFTWGDGDRGRLGH 438
                             V  ++       C+            S K++ WGD D G+ G+
Sbjct: 3243 XFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGN 3302

Query: 439  GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            G       PT V  L      +V+CG S +VA TT 
Sbjct: 3303 GTTTVNRKPTLVHGLEGQKITRVACGSSHSVAWTTV 3338



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 144/290 (49%), Gaps = 22/290 (7%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT  G +Y 
Sbjct: 2960 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYA 3019

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 3020 CG--EATNGRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRHATALTVDGKVFSWG 3076

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 3077 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGEL 3124

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 3125 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TW
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIE-RLNGQAVCQIECGAQFSLALTKSGVVWTW 3233



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 120/242 (49%), Gaps = 13/242 (5%)

Query: 337  LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTV 395
            L  ++V  V+ G      VT+ G+++  G+ T G LG G    +V  PR++ +L      
Sbjct: 2993 LSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVK 3052

Query: 396  RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            + A    H+        G  +++    GK+F+WG+GD G+LGH  +     P  + AL  
Sbjct: 3053 KVAV---HSG-------GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKT 3102

Query: 456  PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 515
                 ++CG S + A+T++G +YT G   YG+LG      +L  ++   L  + V ++AC
Sbjct: 3103 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162

Query: 516  G--DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
            G  D     LT    V++WG G  G+LG G ++  N P  +E L  + V  I CG  F+ 
Sbjct: 3163 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSL 3222

Query: 574  AI 575
            A+
Sbjct: 3223 AL 3224



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 9/165 (5%)

Query: 424  KLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
            K+F WG  D+ +LG G K +++ VP+    L   N  QV+ G     A+T  G VY  G 
Sbjct: 2964 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 3022

Query: 483  PVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGR 539
               G+LG   ++G +P  R    L+   V+++A   G  H   LT   +V++WG+G +G+
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3082

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
            LGH    + + P L+EALK K+++ I CG+S +AAI     L+ W
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 117/253 (46%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3964 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4014

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 4015 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4071

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V +IA G  H A +T+  E+YTWGKG
Sbjct: 4072 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKG 4131

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGHGD++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 4132 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4191

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4192 RGGSDGCKVPMKI 4204



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 108/213 (50%), Gaps = 33/213 (15%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSA-----VSSSSQGSGHDDGDSL-----GDVFIWGECT 199
           G+ GR GH  G S D     L +      V   S GSG  D  +L     G V+ WG+  
Sbjct: 578 GNYGRLGH--GSSEDQTVPMLVTGLKGLKVVDVSCGSG--DAQTLSVTENGQVWSWGD-- 631

Query: 200 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
           GD    G + R GS  G K     PK +E    LD+  + CG + +  +TK G+V+SWG+
Sbjct: 632 GDY---GKLGRGGS-DGCK----TPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGK 683

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN-CNFGL 318
               RLGHG +  V +PK+++ L+   V  VA G  H  A+T SG++Y+WG ++ C    
Sbjct: 684 GDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQ--- 740

Query: 319 LGHGNEMSLW--LPKKLNGPLEGIHVSSVSCGP 349
             H + + +   +P  L G L+  H+  +SCGP
Sbjct: 741 --HFDTLRIAKPVPSVLPG-LDSKHIVGISCGP 770



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSS-SSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S  +  + GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2998 VVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3057

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3058 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3116

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3117 AITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3176

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3177 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3205



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 115/285 (40%), Gaps = 68/285 (23%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG   H S      +M+   P+ +E+     +++IACG  H+A +T
Sbjct: 3070 GKVFSWGE-GDDGKLG---HFS------RMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3119

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+++WG    GRLGHG ++    PK++  L    V  VACG  +  T A+T  G ++
Sbjct: 3120 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179

Query: 308  TW-----------GGSNCNFG-----LLGH-------GNEMSLWLPKK------------ 332
            +W           G   CN       L G        G + SL L K             
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHC 3239

Query: 333  -----------LNGPLEGIHVSSVSCGPW----------HTAVVTSAGQLFTFGDGTFGV 371
                       L   L  + V  V  G +          +   +  + +++ +GD   G 
Sbjct: 3240 LAVXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQ 3299

Query: 372  LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+G       P  V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3300 QGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVAWTTVDVATPS 3344


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3701 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3760

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3761 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 3818

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 3819 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 3877

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 3878 QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 3925

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 3926 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3985

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 3986 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4044

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4045 LQGKKVNRVACGSAHTLA 4062



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 3803 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 3852

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 3853 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 3912

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 3913 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3971

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 3972 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4019

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4020 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4066

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4067 --KPASAGKLPAQV--PMEYNHLQEI 4088



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 183/380 (48%), Gaps = 25/380 (6%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            +   G++      G+K     VP   E+   L+V  +A G +    VT +G+V++ GE  
Sbjct: 2712 VFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2771

Query: 262  GG-RLGHGVDS-DVSHPK-LIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNF 316
                 G G+ S  V  P   I AL +  V+ VA   G   T    + G +++WG  +   
Sbjct: 2772 KWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGD--D 2829

Query: 317  GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
            G LGH + M      +L   L+   +  ++CG  H+A +TS+G+L+T+G G +G LGHGD
Sbjct: 2830 GKLGHFSRMP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2884

Query: 377  RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL 436
              +   P+ V  L G R ++ ACG             + + +    G +F+ GDGD  ++
Sbjct: 2885 NTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSLGDGDLWKI 2934

Query: 437  GHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKAN 494
            G G + +   +P  +  L     CQ+ CG   ++ALT +G V+T G   Y +LG     +
Sbjct: 2935 GPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2994

Query: 495  GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 554
             + P  VEG   K  V     G  H   +T   +VY WG   +G+ G+G T     P+LV
Sbjct: 2995 VRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3054

Query: 555  EALKDKQVKSIVCGTSFTAA 574
            + L+ +++  + CG+S + A
Sbjct: 3055 QGLEGQKITRVACGSSHSVA 3074



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3758

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3759 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3815

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 3816 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 3863

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 3864 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 3923

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 3924 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3982

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 3983 HVRRPRQVQGLQGKKVIAIATGS 4005



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 167/348 (47%), Gaps = 45/348 (12%)

Query: 236  QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
            + +A G   AA  T + +VFSWG     +LG   +  +  P   + L  +NV  VA G  
Sbjct: 2696 KRMAAGLESAA--TIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSK 2753

Query: 296  HTCAVTLSGDMY---------TWG-GSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVS 343
               AVT+ G +Y          WG G +     + HG    +S ++ KK+          
Sbjct: 2754 SLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKV---------- 2803

Query: 344  SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            +V  G   T      G++F++G+G  G LGH  R+    PR +++LK  R    ACG  H
Sbjct: 2804 AVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRM----PRLIEALKTKRIRDIACGSSH 2859

Query: 404  TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
            +AA+             SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+C
Sbjct: 2860 SAALT------------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2907

Query: 464  G--HSLTVALTTTGHVYTMGSPVYGQLGD-PKANG-KLPTRVEGKLTKNFVEEIACGDYH 519
            G   + T+ALT  G V+++G     ++G  P+  G  +P  +E +L    V +I CG   
Sbjct: 2908 GSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIE-RLNGQGVCQIECGAQF 2966

Query: 520  VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
               LT    V+TWGKG   RLGHG       P +VE L+ K++ +  C
Sbjct: 2967 SLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSC 3014



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 151/306 (49%), Gaps = 35/306 (11%)

Query: 173  AVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
            AV S +  +G    D  G VF WGE   DG LG               S +P+ +E+   
Sbjct: 2804 AVHSGTSQTGFXPVD--GKVFSWGE-GDDGKLGHF-------------SRMPRLIEALKT 2847

Query: 233  LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
              +++IACG  H+A +T  GE+++WG    GRLGHG ++    PK++  L    V  VAC
Sbjct: 2848 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2907

Query: 293  G--EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEGIHVSSVSCGP 349
            G  +  T A+T  G +++ G  + +   +G G E+    +P+ +   L G  V  + CG 
Sbjct: 2908 GSRDAQTLALTDEGLVFSLG--DGDLWKIGPGPEVKGCNIPQNIER-LNGQGVCQIECGA 2964

Query: 350  WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC-GVWHTAAVV 408
              +  +T +G ++T+G G +  LGHG  + V  P+ V+ L+G + V  +C G  H  AV 
Sbjct: 2965 QFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVT 3024

Query: 409  EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
            +            SG+++ WGD D G+ G+G       PT V  L      +V+CG S +
Sbjct: 3025 D------------SGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3072

Query: 469  VALTTT 474
            VA TT 
Sbjct: 3073 VAWTTV 3078



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 157/332 (47%), Gaps = 32/332 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
             +  P  +  L   +   ++CG + + A ++
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFAWSS 778



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 21/273 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GILGGG 207
            G DG+ GH   +         +  +   + GS H     S G+++ WG   G+ G LG G
Sbjct: 2827 GDDGKLGHFSRMP-RLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRLGHG 2883

Query: 208  IHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELGGRL 265
             + +            PK V+  +   V  +ACG R A  +  T +G VFS G+    ++
Sbjct: 2884 DNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKI 2934

Query: 266  GHGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 324
            G G +    + P+ I+ L    V  + CG   + A+T SG ++TWG  +  +  LGHG++
Sbjct: 2935 GPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHGSD 2992

Query: 325  MSLWLPKKLNGPLEGIHVSSVSC-GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 383
            + +  P+ + G L G  + + SC G  H   VT +GQ++ +GD   G  G+G       P
Sbjct: 2993 VHVRKPQVVEG-LRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKP 3051

Query: 384  REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
              V  L+G +  R ACG  H+ A   V V + S
Sbjct: 3052 TLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3084



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 7/156 (4%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
            GK+F+WG+GD G+LGH  +  RL+     AL       ++CG S + ALT++G +YT G 
Sbjct: 2819 GKVFSWGEGDDGKLGHFSRMPRLI----EALKTKRIRDIACGSSHSAALTSSGELYTWGL 2874

Query: 483  PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANGRL 540
              YG+LG      +L  ++   L  + V ++ACG  D     LT    V++ G G   ++
Sbjct: 2875 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKI 2934

Query: 541  GHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G G +    N P  +E L  + V  I CG  F+ A+
Sbjct: 2935 GPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLAL 2970



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 3698 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3748

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3749 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3805

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 3806 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3865

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 3866 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3925

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 3926 RGGSDGCKVPMKI 3938



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 99/264 (37%), Gaps = 68/264 (25%)

Query: 403  HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
            ++ ++ + M     S+     K+F+WG  D+ +LG    +   VP+    L   N  QV+
Sbjct: 2690 NSGSLAKRMAAGLESAATIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVA 2749

Query: 463  CGHSLTVALTTTGHVYTMGS----PVYG-------------------------------- 486
             G     A+T  G VY  G     P +G                                
Sbjct: 2750 GGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGT 2809

Query: 487  -QLGDPKANGK-----------------LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
             Q G    +GK                 +P  +E   TK  + +IACG  H A LTS  E
Sbjct: 2810 SQTGFXPVDGKVFSWGEGDDGKLGHFSRMPRLIEALKTKR-IRDIACGSSHSAALTSSGE 2868

Query: 529  VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK--------- 579
            +YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L           
Sbjct: 2869 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGD 2928

Query: 580  ---WVSGVDQSMCSGCRIPFNFKR 600
               W  G    +  GC IP N +R
Sbjct: 2929 GDLWKIGPGPEV-KGCNIPQNIER 2951


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 191/382 (50%), Gaps = 37/382 (9%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            + F+WG      +  GG    G++  V++ SF             Q I CG     +V  
Sbjct: 1802 EAFLWGSGRNGQMCEGG---RGAFVPVRVPSFSCS----------QQIVCGQNCTFVVQN 1848

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+     I +++   V  +A     + HT AVT SG+++
Sbjct: 1849 NGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTESGEVF 1908

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      P+++   L+G  V  +SCG  H+AVVT+ G+LFTFG+G
Sbjct: 1909 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVIQLSCGFKHSAVVTADGKLFTFGNG 1965

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +G LG G   +   P  V +L+  +    ACG+ HT  V      S+  +N     ++ 
Sbjct: 1966 DYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCV------SADGTN-----VWA 2014

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            +GDGD G+LG G+   + +PT + AL      +V+CG   +VAL+  G V+T G      
Sbjct: 2015 FGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTWGQERL-- 2072

Query: 488  LGDPKANGK---LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            +G P   G     P  V   L+  F+E++ CG  H  VLTS  +V+ WG  + G+LG G 
Sbjct: 2073 IGQPDTRGGSNCQPQEV-ASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGH 2131

Query: 545  TDD-RNFPSLVEALKDKQVKSI 565
            T+     P LV  L  K ++ +
Sbjct: 2132 TNSPVREPQLVPCLTGKNIRQV 2153



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 127/236 (53%), Gaps = 18/236 (7%)

Query: 345  VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW-- 402
            + CG   T VV + G +   G+G++G LG G+   + +   + S++G    + A  V   
Sbjct: 1836 IVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSD 1895

Query: 403  -HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
             HT AV E            SG++F+WGDGD G+LGHG+ + +  P  + AL      Q+
Sbjct: 1896 GHTLAVTE------------SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQL 1943

Query: 462  SCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
            SCG   +  +T  G ++T G+  YG+LG     N K+PTRV   L  + +  +ACG  H 
Sbjct: 1944 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVA-LESHQIGYVACGLNHT 2002

Query: 521  AVLTSR-TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              +++  T V+ +G G  G+LG G+T  ++ P+ ++AL+   +K + CGT F+ A+
Sbjct: 2003 LCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVAL 2058



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 19/187 (10%)

Query: 406  AVVEVMVGSSSSS-------NCS-----SGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
            A V V V S S S       NC+     +G +   G+G  GRLG G+ +     T ++++
Sbjct: 1821 AFVPVRVPSFSCSQQIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSI 1880

Query: 454  VEPNFCQV-----SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN 508
                  Q+     S GH  T+A+T +G V++ G   YG+LG   ++ +   R    L   
Sbjct: 1881 QGFVVTQLATSVGSDGH--TLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE 1938

Query: 509  FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
             V +++CG  H AV+T+  +++T+G G  GRLG G T ++  P+ V AL+  Q+  + CG
Sbjct: 1939 EVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACG 1998

Query: 569  TSFTAAI 575
             + T  +
Sbjct: 1999 LNHTLCV 2005


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  174 bits (441), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 196/388 (50%), Gaps = 36/388 (9%)

Query: 202 GILGGGIHRSGSYAGVKMDSFV-PKAVESAVVLD-VQNIACGGRHAALVTKQGEVFSWGE 259
           G++  G    G    +  +S + PK +ES    + ++ + CGG H+A++T  GE+  WG 
Sbjct: 9   GVVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGY 68

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN-FGL 318
              G+LG G   D+  P+++ ++K  NV  V+C + H+ A+   G +YTWG   CN  G 
Sbjct: 69  GGCGQLGLGDLKDIVIPRVMTSIK--NVINVSCSDRHSAAILEDGRLYTWG---CNKSGK 123

Query: 319 LGHGNEMSLWLPKKLNGP-----LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
           LG G+         +  P     L    V  VSCG +HTA +T   + +T+G G  G LG
Sbjct: 124 LGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLG 183

Query: 374 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
           HGD   V TP+ ++SL GL      CG  HTA ++            ++GK++  G G  
Sbjct: 184 HGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILL------------NNGKVYFCGGGAF 231

Query: 434 GRLGHGDKEARLVPTCV-AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-- 490
           G+LG G KE   +P  +  +L   +  +VS G+  +  +TT G VYT G    G+LG   
Sbjct: 232 GKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQG--GRLGHIY 289

Query: 491 --PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
             P+ +   P  VE KL       I+CG  H  V+++  +VY WG   N  LGHG  D +
Sbjct: 290 NGPEPDILSPKLVE-KLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRN--LGHGVIDSK 346

Query: 549 -NFPSLVEALKDKQVKSIVCGTSFTAAI 575
            N P+L   L++K +  + CG + T A+
Sbjct: 347 PNDPTLHPILQNKNIVQVSCGKTHTIAL 374



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 147/287 (51%), Gaps = 26/287 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G ++ WG C   G LG G   S +          P+ VE  +   V  ++CG  H A +T
Sbjct: 111 GRLYTWG-CNKSGKLGIG---SLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLT 166

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              + ++WG  + GRLGHG  +DV  PKLI++L  ++V+ + CG HHT  +  +G +Y  
Sbjct: 167 DLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFC 226

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           GG    FG LG G++  +++PK L G L    +  VS G  H+AV+T+ G+++T+G G  
Sbjct: 227 GGG--AFGKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQG-- 282

Query: 370 GVLGH---GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G LGH   G    + +P+ V+ L  +  V  +CG  HT  +  +            G ++
Sbjct: 283 GRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNI------------GDVY 330

Query: 427 TWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQVSCGHSLTVALT 472
            W  G    LGHG  +++   PT    L   N  QVSCG + T+AL+
Sbjct: 331 AW--GVTRNLGHGVIDSKPNDPTLHPILQNKNIVQVSCGKTHTIALS 375


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 759  IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 818

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 819  GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 876

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 877  GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 935

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 936  QLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 983

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 984  RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 1043

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 1044 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 1102

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 1103 LQGKKVNRVACGSAHTLA 1120



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 861  SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 910

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 911  VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 970

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 971  VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 1029

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 1030 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 1077

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 1078 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 1124

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 1125 --KPASAGKLPAQV--PMEYNHLQEI 1146



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 34/394 (8%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 757  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 816

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 817  GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 873

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 874  GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 921

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 922  KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 981

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 982  LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 1040

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAIC-----LHKWVSGVDQSMCSGC-------RI 594
                P  V+ L+ K+V +I  G S     C     ++ W    +  +  G        R+
Sbjct: 1041 HVRRPRQVQGLQGKKVIAIATG-SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 1099

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAP 628
                + K+ N   CG  +    S+ K   A   P
Sbjct: 1100 VAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 1133



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 107/205 (52%), Gaps = 21/205 (10%)

Query: 378 ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG 437
           ++   PR +++LK  R    ACG  H+AA+             SSG+L+TWG G+ GRLG
Sbjct: 1   MNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLG 48

Query: 438 HGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDPKANG 495
           HGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G   +G+LG   + G
Sbjct: 49  HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEG 108

Query: 496 -KLPTRVEGKLTKNFVEEIACGDYHVAVLTSR-----TEVYTWGKGANGRLGHGDTDDRN 549
             +P  +E +L    V +I CG      LT        +VY WG   +G+ G+G T    
Sbjct: 109 CNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNR 167

Query: 550 FPSLVEALKDKQVKSIVCGTSFTAA 574
            P+LV+ L+ +++  + CG+S + A
Sbjct: 168 KPTLVQGLEGQKITRVACGSSHSVA 192



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 17/200 (8%)

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
           +L   L+   +  ++CG  H+A +TS+G+L+T+G G +G LGHGD  +   P+ V  L G
Sbjct: 7   RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG 66

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
            R ++ ACG             + + +    G +F+WGDGD G+LG G  E   +P  + 
Sbjct: 67  HRVIQVACG----------SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE 116

Query: 452 ALVEPNFCQVSCGHSLTVALTTTG-----HVYTMGSPVYGQLGDPKAN-GKLPTRVEGKL 505
            L     CQ+ CG   ++ALT +G      VY  G   +GQ G+      + PT V+G L
Sbjct: 117 RLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-L 175

Query: 506 TKNFVEEIACGDYHVAVLTS 525
               +  +ACG  H    T+
Sbjct: 176 EGQKITRVACGSSHSVAWTT 195



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 10/205 (4%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           M+   P+ +E+     +++IACG  H+A +T  GE+++WG    GRLGHG ++    PK+
Sbjct: 1   MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 60

Query: 279 IDALKNINVELVACG--EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
           +  L    V  VACG  +  T A+T  G +++WG  + +FG LG G      +P+ +   
Sbjct: 61  VKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG--DGDFGKLGRGGSEGCNIPQNIE-R 117

Query: 337 LEGIHVSSVSCGPWHTAVVTSAG-----QLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
           L G  V  + CG   +  +T +G     Q++ +GD   G  G+G       P  V  L+G
Sbjct: 118 LNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEG 177

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSS 416
            +  R ACG  H+ A   V V + S
Sbjct: 178 QKITRVACGSSHSVAWTTVDVATPS 202



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 756 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 806

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
              + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 807 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 863

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 864 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 923

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
             GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 924 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 983

Query: 586 QSMCSGCRIPFNF 598
           +    GC++P   
Sbjct: 984 RGGSDGCKVPMKI 996



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 2/131 (1%)

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT 506
           P  + AL       ++CG S + ALT++G +YT G   YG+LG      +L  ++   L 
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 65

Query: 507 KNFVEEIACG--DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKS 564
            + V ++ACG  D     LT    V++WG G  G+LG G ++  N P  +E L  + V  
Sbjct: 66  GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 125

Query: 565 IVCGTSFTAAI 575
           I CG  F+ A+
Sbjct: 126 IECGAQFSLAL 136



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 11/117 (9%)

Query: 494 NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL 553
           N   P  +E   TK  + +IACG  H A LTS  E+YTWG G  GRLGHGD   +  P +
Sbjct: 2   NCDKPRLIEALKTKR-IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 60

Query: 554 VEALKDKQVKSIVCGTSFTAAICL------HKWVSG----VDQSMCSGCRIPFNFKR 600
           V+ L   +V  + CG+     + L        W  G    + +    GC IP N +R
Sbjct: 61  VKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 117



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 79/184 (42%), Gaps = 31/184 (16%)

Query: 139 ACGSVNS---LSSG-------GSDGRTGH---LKGLSGDTFRVSLSSAVSSSSQGSGHDD 185
           ACGS +S    SSG       G  GR GH      L     +V L   V   + GS    
Sbjct: 21  ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 80

Query: 186 GDSLGD---VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGG 242
             +L D   VF WG+  GD    G + R GS         +P+ +E      V  I CG 
Sbjct: 81  TLALTDEGLVFSWGD--GDF---GKLGRGGSEG-----CNIPQNIERLNGQGVCQIECGA 130

Query: 243 RHAALVTKQG-----EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           + +  +TK G     +V++WG+   G+ G+G  +    P L+  L+   +  VACG  H+
Sbjct: 131 QFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 190

Query: 298 CAVT 301
            A T
Sbjct: 191 VAWT 194


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 183/365 (50%), Gaps = 30/365 (8%)

Query: 238  IACGGRHAALVTKQGEVFSWGEELGGRLGHGVD--SDVSHPKLIDALKNINVELVACGEH 295
            +ACG  H A+++  GE+F+WG    G+LGHG++     S P+ ++  K+  + +++CG  
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGE 1096

Query: 296  HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
            H+ AV  S  +Y+WG S   +G LGHG      LPKK+     G  V +++ G  HT V+
Sbjct: 1097 HSVAVDQSFQIYSWGSSR--YGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154

Query: 356  TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
              +G LFTFG    G LG G+  + + P  +++           G+ H   +  +  G S
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIET-------SEIVGI-HGERITAIAAGHS 1206

Query: 416  SSSNC-SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
             S  C  +G +++WG   +G+LGHG+ E  L P  +  L      ++SCGH  TVA++  
Sbjct: 1207 HSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISEL 1266

Query: 475  GHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTS------RT 527
              VY  G   +  LG+     +L P  +E  + K  +E++ CG YH A +T+      R 
Sbjct: 1267 NSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKK-IEKVVCGLYHTATVTAAENGSDRG 1325

Query: 528  EVYTWGKGANGRLGHG-----DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLH 578
             VY  G G +G+LG G        D+  P+++ +L    +     G+ F+A I     L+
Sbjct: 1326 NVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALY 1385

Query: 579  KWVSG 583
             W  G
Sbjct: 1386 TWGYG 1390



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 190/390 (48%), Gaps = 41/390 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G++F WG     G LG G++  G Y         P+ VE+     +  I+CGG H+  V 
Sbjct: 1051 GELFTWGN-NSQGQLGHGLN-VGKYQST------PRRVETFKSSPIIMISCGGEHSVAVD 1102

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLI-DALKNINVELVACGEHHTCAVTLSGDMYT 308
            +  +++SWG    G+LGHGV +  + PK I D      V  +A G  HT  +  SGD++T
Sbjct: 1103 QSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFT 1162

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKL-NGPLEGIH---VSSVSCGPWHTAVVTSAGQLFTF 364
            +G ++   G LG GN  +  +P ++    + GIH   +++++ G  H+ +    G ++++
Sbjct: 1163 FGWNDS--GQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSW 1220

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
            G  + G LGHG+      P+++D LKG   ++ +CG +HT A+ E+              
Sbjct: 1221 GANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISEL------------NS 1268

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT------GHVY 478
            ++ WG G+   LG+G  +  L P  +   +     +V CG   T  +T        G+VY
Sbjct: 1269 VYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVY 1328

Query: 479  TMGSPVYGQLG------DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
              G   +G+LG       P  +   P  +    + N V   + G    A++T+   +YTW
Sbjct: 1329 ICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIV-GFSSGSEFSAIITNNGALYTW 1387

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQV 562
            G G  G++G+G T+D   P+ + +L D++ 
Sbjct: 1388 GYGNFGQIGNGKTEDMWLPTKI-SLNDQRF 1416



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 5/143 (3%)

Query: 440  DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-- 497
            D +  L P       E     V+CG      +++ G ++T G+   GQLG     GK   
Sbjct: 1016 DPDLLLNPMPPLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQS 1075

Query: 498  -PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P RVE     + +  I+CG  H   +    ++Y+WG    G+LGHG    +N P  +E 
Sbjct: 1076 TPRRVE-TFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIED 1134

Query: 557  LKDKQVKSIVCGTSFTAAICLHK 579
                Q K +   T +   + L K
Sbjct: 1135 FTGGQ-KVLAIATGYAHTMVLKK 1156


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 2173 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 2232

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ V+ VA   G  H  A++  G++Y+WG      G L
Sbjct: 2233 GGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 2290

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  ++ G  H+A +T AG L+++G G +G LGHGD   
Sbjct: 2291 GHGNRSPCDRPRVVES-LRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSED 2349

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 2350 QLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 2397

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 2398 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 2457

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 2458 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 2516

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K++  + CG++ T A
Sbjct: 2517 LQGKKINRVACGSAHTLA 2534



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 197/414 (47%), Gaps = 54/414 (13%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 1151 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 1200

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL N  V+ VA   G  H  A+T+ G +++
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 1260

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG    + G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 1261 WG--EGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 1317

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG      +          +    G +F+W
Sbjct: 1318 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 1367

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            GDGD G+LG G  E   VP  +  L     CQ+ CG   ++ALT +G V+T G   +G+L
Sbjct: 1368 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427

Query: 489  GDP-----------------KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS------ 525
                                K    +P    G ++   +     G    + ++S      
Sbjct: 1428 RPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQG 1487

Query: 526  -----RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                 + EVY WG   +G+ G+G T     P+LV+ L+ +++  + CG+S + A
Sbjct: 1488 ERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1541



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ VES   ++V +IA GG H+A 
Sbjct: 2275 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVVESLRGIEVVDIAAGGAHSAC 2324

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+++SWG+   GRLGHG   D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 2325 ITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT 2384

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 2385 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 2443

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 2444 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 2491

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 2492 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 2538

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P   GKLPT+V   +  N + EI
Sbjct: 2539 --KPANAGKLPTQV--PMEYNHLPEI 2560



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 165/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +Y    +
Sbjct: 129 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYN 183

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +   G            P+ + G      + V++ S G  H   + + G++F++G G  G
Sbjct: 184 SDTLG------------PQLVQGLASRNIVKVAAHSDGH-HYLALAATGEVFSWGCGDGG 230

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +L G +     V  ACG  ++AA+             + G+L+
Sbjct: 231 RLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 278

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E + +P  V  L       VSCG   + T+A+T  G V++ G   
Sbjct: 279 TWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD 338

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    + ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 339 YGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 397

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 398 TEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSW 438



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 178/395 (45%), Gaps = 34/395 (8%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 2171 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2230

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + V  V+   G  H   ++S G+++++G+   
Sbjct: 2231 GAGGRLGIGGTESVST--PTLLES-IQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAED 2287

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR V+SL+G+  V  A G  H+A +              +G L++WG
Sbjct: 2288 GKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACIT------------VAGDLYSWG 2335

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGHGD E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 2336 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 2395

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 2396 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 2454

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAIC-----LHKWVSGVDQSMCSGC-------RI 594
                P  V+ L+ K+V +I  G S     C     ++ W    +  +  G        R+
Sbjct: 2455 HVRRPRQVQGLQGKKVIAIATG-SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 2513

Query: 595  PFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPN 629
                + K+ N   CG  +    S+ K   A   P 
Sbjct: 2514 VAALQGKKINRVACGSAHTLAWSTSKPANAGKLPT 2548



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 150/298 (50%), Gaps = 22/298 (7%)

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y 
Sbjct: 1146 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 1205

Query: 309  WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
             G      G LG G +  ++ LP+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 1206 CG--EATNGRLGLGISSGTVPLPRQITA-LSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 1262

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 1263 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGEL 1310

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 1311 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 1370

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
             +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWG+G  G L
Sbjct: 1371 DFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 142/306 (46%), Gaps = 37/306 (12%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WGE   DG LG   H S      +M+   P+ +E+     +++IACG  H+A +T
Sbjct: 1256 GKVFSWGE-GDDGKLG---HFS------RMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 1305

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
              GE+++WG    GRLGHG ++    PK++  L    V  VACG  +  T A+T  G ++
Sbjct: 1306 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 1365

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + +FG LG G      +P+ +   L G  V  + CG   +  +T +G ++T+G G
Sbjct: 1366 SWG--DGDFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGRG 1422

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--------------WHTAAV-----V 408
             FG L     I V +    D ++ +R  + AC +              W    +     +
Sbjct: 1423 DFGELRPDSHI-VQSGNVSDRMR-VRN-KGACLIPLPFFGLVSPREMGWEIVGIERNSGI 1479

Query: 409  EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                G          +++ WGD D G+ G+G       PT V  L      +V+CG S +
Sbjct: 1480 SSFCGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 1539

Query: 469  VALTTT 474
            VA TT 
Sbjct: 1540 VAWTTV 1545



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 156/332 (46%), Gaps = 32/332 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  +++  + DT    L   ++S +  + + H DG       + G+VF WG C   G 
Sbjct: 174 NGRV-YVQAYNSDTLGPQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWG-CGDGGR 231

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG      G    ++    +           V +IACG  ++A +T +GE+++WG    G
Sbjct: 232 LG-----HGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYG 286

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  V+C  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 287 RLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 344

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + +  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 345 GGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 403

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + V  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 404 YPKLLEGLQGKKVVDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 451

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
             +  P+ +  L   +   ++CG + + A ++
Sbjct: 452 ITKPQPSALPGLDTKHIVGIACGPAQSFAWSS 483



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 16/280 (5%)

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A T+   ++ WG ++ +   LG      + +P   +  L  ++V  V+ G      VT  
Sbjct: 1144 AATIRTKVFVWGLNDKD--QLGGLKGSKIKVPS-FSETLSALNVVQVAGGSKSLFAVTVE 1200

Query: 359  GQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+++  G+ T G LG G    +V  PR++ +L      + A    H+        G  + 
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAV---HSG-------GRHAM 1250

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
            +    GK+F+WG+GD G+LGH  +     P  + AL       ++CG S + A+T++G +
Sbjct: 1251 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 1310

Query: 478  YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKG 535
            YT G   YG+LG      +L  ++   L  + V ++ACG  D     LT    V++WG G
Sbjct: 1311 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 1370

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              G+LG G ++  N P  +E L  + V  I CG  F+ A+
Sbjct: 1371 DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 1410



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 1184 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVH 1243

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G    +ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 1244 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 1302

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             +TS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 1303 AITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 1362

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC +P N +R
Sbjct: 1363 LVFSWGDGDFGKLGRGGSEGCNVPQNIER 1391



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 2170 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 2220

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 2221 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 2277

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V +IA G  H A +T   ++Y+WGKG
Sbjct: 2278 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKG 2337

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGHGD++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 2338 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 2397

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 2398 RGGSDGCKVPMKI 2410


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203 ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 203 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 262

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
           GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 263 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 320

Query: 320 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 321 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 379

Query: 380 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
              P+ V++L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 380 QLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 427

Query: 438 HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
            G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 428 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 487

Query: 497 LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
            P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 488 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 546

Query: 557 LKDKQVKSIVCGTSFTAA 574
           L+ K+V  + CG++ T A
Sbjct: 547 LQGKKVNRVACGSAHTLA 564



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 305 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 354

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           VT  G++++WG+   GRLGH    D   PKL++AL+   V  VACG      + L+ D  
Sbjct: 355 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT 414

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 415 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 473

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 474 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 521

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 522 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 568

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEI 513
              P + GKLP +V   +  N ++EI
Sbjct: 569 --KPASAGKLPAQV--PMEYNHLQEI 590



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 260

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                  +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 261 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 317

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 318 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 365

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
            G  GRLGH D E +L P  V AL       V+CG   + T+ LT    V++ G   YG+
Sbjct: 366 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 425

Query: 488 LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 426 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 484

Query: 547 DRNFPSLVEALKDKQVKSIVCGT 569
               P  V+ L+ K+V +I  G+
Sbjct: 485 HVRRPRQVQGLQGKKVIAIATGS 507



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 200 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 250

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
              + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 251 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 307

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 308 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 367

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
             GRLGH D++D+  P LVEAL+  +V  + CG+     +CL        W  G    + 
Sbjct: 368 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 427

Query: 586 QSMCSGCRIPFNF 598
           +    GC++P   
Sbjct: 428 RGGSDGCKVPMKI 440


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 189/378 (50%), Gaps = 22/378 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 3845 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYATGYGA 3904

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 3905 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 3962

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 3963 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4021

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V+ L+G R V  ACG               + + C      +++WGDGD G+LG
Sbjct: 4022 QLKPKLVEVLQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 4069

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 4070 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4129

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 4130 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4188

Query: 557  LKDKQVKSIVCGTSFTAA 574
            L+ K+V  + CG++ T A
Sbjct: 4189 LQGKKVNRVACGSAHTLA 4206



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 160/326 (49%), Gaps = 40/326 (12%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 3947 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 3996

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G++++WG+   GRLGH    D   PKL++ L+   V  +ACG      + L+ D  
Sbjct: 3997 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDT 4056

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4057 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4115

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 4116 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4163

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 4164 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4210

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEI 513
               P + GKLP +V   +  N ++EI
Sbjct: 4211 --KPASAGKLPAQV--PMEYNHLQEI 4232



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 159/308 (51%), Gaps = 32/308 (10%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 2962 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 252  GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
            G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 3072 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LGHGD  +   P+ V  L G R ++ ACG             + + +    G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG----------SRDAQTLALTDEGLVFSW 3178

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT-----MGSP 483
            GDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T     + SP
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWYVSFLLSP 3238

Query: 484  VYGQLGDP 491
            V+  LG P
Sbjct: 3239 VH-LLGVP 3245



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 21/323 (6%)

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYATGY 3902

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                   +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 3903 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3959

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 3960 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 4007

Query: 430  DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
             G  GRLGH D E +L P  V  L       ++CG   + T+ LT    V++ G   YG+
Sbjct: 4008 KGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4067

Query: 488  LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
            LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 4068 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4126

Query: 547  DRNFPSLVEALKDKQVKSIVCGT 569
                P  V+ L+ K+V +I  G+
Sbjct: 4127 HVRRPRQVQGLQGKKVIAIATGS 4149



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 480 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 152/305 (49%), Gaps = 26/305 (8%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++  A G   AA  T + +VF WG     +LG    S +  P   + L  +NV  VA G 
Sbjct: 2945 IRKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002

Query: 295  HHTCAVTLSGDMYTWG-GSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPW 350
                AVT+ G +Y  G  +N   GL L  G   ++ +P+++   L    V  V+   G  
Sbjct: 3003 KSLFAVTVEGKVYACGEATNGRLGLGLSSG---TVPIPRQITA-LSSYVVKKVAVHSGGR 3058

Query: 351  HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            H   +T  G++F++G+G  G LGH  R++   PR +++LK  R    ACG  H+AA+   
Sbjct: 3059 HATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT-- 3116

Query: 411  MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLT 468
                      SSG+L+TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T
Sbjct: 3117 ----------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166

Query: 469  VALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
            +ALT  G V++ G   +G+LG   + G  +P  +E +L    V +I CG      LT   
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSG 3225

Query: 528  EVYTW 532
             V+TW
Sbjct: 3226 VVWTW 3230



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 125/243 (51%), Gaps = 28/243 (11%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
            G V+  GE T +G LG G+  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 3012 GKVYACGEAT-NGRLGLGLS-SGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 3062

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
            TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 3123 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3227

Query: 426  FTW 428
            +TW
Sbjct: 3228 WTW 3230



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 156/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 470 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 527

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 528 LGHGDTLPLEEPKV-ISAFSGKQGGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 582

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 583 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 640

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 641 GGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 747

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  PT +  L   +   ++CG + + A
Sbjct: 748 VTKPEPTALPGLDTKHIVGIACGPAQSFA 776



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 135/280 (48%), Gaps = 16/280 (5%)

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A T+   ++ WG ++ +   LG      + +P   +  L  ++V  V+ G      VT  
Sbjct: 2955 AATIRTKVFVWGLNDKD--QLGGLKGSKIKVPS-FSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 359  GQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+++  G+ T G LG G    +V  PR++ +L      + A    H+        G  ++
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV---HSG-------GRHAT 3061

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
            +    GK+F+WG+GD G+LGH  +     P  + AL       ++CG S + ALT++G +
Sbjct: 3062 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3121

Query: 478  YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKG 535
            YT G   YG+LG      +L  ++   L  + V ++ACG  D     LT    V++WG G
Sbjct: 3122 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              G+LG G ++  N P  +E L  + V  I CG  F+ A+
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407  VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
            VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 464  -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
             G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 3113

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
             LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 3114 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173

Query: 578  --HKWVSG----VDQSMCSGCRIPFNFKR 600
                W  G    + +    GC IP N +R
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 115/253 (45%), Gaps = 24/253 (9%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G ++ +G    G LG  +   V  P   ++L  LR ++   G     AV          
Sbjct: 3842 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVT--------- 3892

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
               + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 3893 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3949

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 3950 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4009

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
              GRLGH D++D+  P LVE L+  +V  I CG+     +CL        W  G    + 
Sbjct: 4010 RYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4069

Query: 586  QSMCSGCRIPFNF 598
            +    GC++P   
Sbjct: 4070 RGGSDGCKVPMKI 4082


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203 ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 303 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 362

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
           GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 363 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 420

Query: 320 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 421 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 479

Query: 380 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
              P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 480 QLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 527

Query: 438 HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
            G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 528 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 587

Query: 497 LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
            P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 588 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 646

Query: 557 LKDKQVKSIVCGTSFTAA 574
           L+ K+V  + CG++ T A
Sbjct: 647 LQGKKVNRVACGSAHTLA 664



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 405 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 454

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 455 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT 514

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 515 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 573

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 574 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 621

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 622 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 668

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEI 513
              P + GKLP +V   +  N ++EI
Sbjct: 669 --KPASAGKLPAQV--PMEYNHLQEI 690



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 301 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 360

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                  +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 361 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 417

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 418 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 465

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
            G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 466 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 525

Query: 488 LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 526 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 584

Query: 547 DRNFPSLVEALKDKQVKSIVCGT 569
               P  V+ L+ K+V +I  G+
Sbjct: 585 HVRRPRQVQGLQGKKVIAIATGS 607



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 300 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 350

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
              + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 351 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 407

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 408 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 467

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL------HKWVSG----VD 585
             GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 468 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 527

Query: 586 QSMCSGCRIPFNF 598
           +    GC++P   
Sbjct: 528 RGGSDGCKVPMKI 540


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/358 (33%), Positives = 179/358 (50%), Gaps = 23/358 (6%)

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
            VP   ++   L   +IA G +   +V++ G+VF+ GE   GRLG GV  +V  P  +  L
Sbjct: 2935 VPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVL 2994

Query: 283  KNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
                V+ VA   G  H  A+TL G +++WG G +   G LGHGN  +L  P+ +   L  
Sbjct: 2995 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED---GKLGHGNRTTLDKPRLVEA-LRA 3050

Query: 340  IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
              +  ++CG  H+A ++S G+L+T+G G +G LGHGD  +   P+ V +L G R ++ AC
Sbjct: 3051 KKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVAC 3110

Query: 400  GV--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
            G     T A+ E             G +F+WGDGD G+LG G  E    P  +  L    
Sbjct: 3111 GSRDAQTLALTE------------DGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG 3158

Query: 458  FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACG 516
              Q+ CG   ++ALT  G V+T G   Y +LG     + + P  + G L    V  +A G
Sbjct: 3159 VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVG 3217

Query: 517  DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              H   +T   +VY WG   +G+ G G+T     P+LV  L    V  + CG+S + A
Sbjct: 3218 ALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3275



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/380 (33%), Positives = 189/380 (49%), Gaps = 24/380 (6%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++      P   E+  +L    +A G +    VT  G++F+ G   
Sbjct: 4072 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4131

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGL 318
            GGRLG G     S P L+ +L+++ V+ VA   G  H  A+T  G++Y WG G +   G 
Sbjct: 4132 GGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGED---GK 4188

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
            LGHGN +S   PK L   L G+ V+ ++CG  H+A +T++G + T+G G +G LGHGD  
Sbjct: 4189 LGHGNRLSYDRPKLLEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSE 4247

Query: 379  SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRL 436
                P+ V++L G R +  ACG               + + C      +++WGDGD G+L
Sbjct: 4248 DQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGDYGKL 4295

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG- 495
            G G  +   +P  + +L      +V CG   +VALT +G VYT G   + +LG    +  
Sbjct: 4296 GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV 4355

Query: 496  KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
            + P +V     K  +  IA G  H    +   EVYTWG    G+LG G       P LV 
Sbjct: 4356 RRPKKVAALQGKKII-SIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVA 4414

Query: 556  ALKDKQVKSIVCGTSFTAAI 575
            AL+ K +  + CG++ T A+
Sbjct: 4415 ALQGKHIVKVTCGSAHTLAL 4434



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/333 (34%), Positives = 166/333 (49%), Gaps = 27/333 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF  GE T +G LG G+  +     V +   +P  V    V+    +  GG+HA  +T
Sbjct: 2964 GKVFACGEGT-NGRLGLGVTHN-----VPLPHQLP--VLHQYVVKKVAVHSGGKHALALT 3015

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G+VFSWGE   G+LGHG  + +  P+L++AL+   +  +ACG  H+ A++  G++YTW
Sbjct: 3016 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTW 3075

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDG 367
            G     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++GDG
Sbjct: 3076 GLG--EYGRLGHGDNATQLKPKLVTA-LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDG 3132

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             FG LG G     +TP E++ L G+  V+  CG   + A+              +G+++T
Sbjct: 3133 DFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTR------------AGEVWT 3180

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WG GD  RLGHG  +    P  +A L       V+ G    +A+T  G VY  G   +GQ
Sbjct: 3181 WGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3240

Query: 488  LGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYH 519
             G       K P  V G L   FV  +ACG  H
Sbjct: 3241 QGSGNTFVNKKPALVIG-LDAVFVNRVACGSSH 3272



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 148/307 (48%), Gaps = 19/307 (6%)

Query: 223  VPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
            +P  + S   + V+ +A   GG+H   +T  GEV++WGE   G+LGHG       PKL++
Sbjct: 4145 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLE 4204

Query: 281  ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
             L  ++V  +ACG  H+ A+T SG + TWG     +G LGHG+      PK +   L G 
Sbjct: 4205 HLNGMSVADIACGSAHSAAITASGHVLTWGKGR--YGRLGHGDSEDQLRPKLVEA-LLGY 4261

Query: 341  HVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
                ++CG     T  +T    ++++GDG +G LG G       P +++SL GL  ++  
Sbjct: 4262 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4321

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            CG   + A+ +            SG ++TWG GD  RLGHG  +    P  VAAL     
Sbjct: 4322 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4369

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
              ++ G    VA +  G VYT G    GQLGD         R+   L    + ++ CG  
Sbjct: 4370 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4429

Query: 519  HVAVLTS 525
            H   L++
Sbjct: 4430 HTLALST 4436



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 29/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG          G ++    PK +E    + V +IACG  H+A +T
Sbjct: 4176 GEVYAWGEGE-DGKLG---------HGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAIT 4225

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
              G V +WG+   GRLGHG   D   PKL++AL       +AC  G+  T  +T   +++
Sbjct: 4226 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4285

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LG G      LP K+   L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4286 SWG--DGDYGKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4342

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLF 426
             F  LGHG    V  P++V +L+G + +  A G  H  A             CS +G+++
Sbjct: 4343 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDAGEVY 4389

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            TWGD D G+LG G   A   P  VAAL   +  +V+CG + T+AL+T+
Sbjct: 4390 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4437



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 163/333 (48%), Gaps = 33/333 (9%)

Query: 254  VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            V  WG    E+LGG  G    S V  P     +  +    +A G      V+  G ++  
Sbjct: 2914 VMVWGLNDKEQLGGLKG----SKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFAC 2969

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G   ++ LP +L  P+   +V    +V  G  H   +T  G++F++G
Sbjct: 2970 GEGTN---GRLGLGVTHNVPLPHQL--PVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3024

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+R ++  PR V++L+  +    ACG  H+AA+             S G+L
Sbjct: 3025 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAI------------SSQGEL 3072

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V AL      QV+CG   + T+ALT  G V++ G  
Sbjct: 3073 YTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDG 3132

Query: 484  VYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G   P  +E +L+   V +I CG      LT   EV+TWGKG   RLGH
Sbjct: 3133 DFGKLGRGGSEGSATPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3191

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P  +  L+ ++V  +  G     A+
Sbjct: 3192 GGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAV 3224



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 146/317 (46%), Gaps = 42/317 (13%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA--- 291
           V+ +AC      L++K+G++++W         H    D + P+ +D   +I  E      
Sbjct: 597 VKQVACSKDIVLLLSKEGKLYNW---------HISKPD-TEPQPLD-FGDIGSETFISIA 645

Query: 292 --CGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
             C   H  AV  + + Y+WG G N     LGHG+  S  LP K+   +    V SV CG
Sbjct: 646 SHCEGRHFLAVDNNFNAYSWGTGDNRR---LGHGDCHSRELPTKIESLVR--RVKSVYCG 700

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             ++A +T  G L+T+G G +G LGHG       P  V +LK  +             VV
Sbjct: 701 CSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQ-------------VV 747

Query: 409 EVMVGSSSSSNC---SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
           +V +GS  +      + G ++ WGDGD G+LG+    + L P  +  L  P   +V  G 
Sbjct: 748 DVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECL--PRVQRVFAGS 805

Query: 466 SLTVALTTTGHVYTMG--SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
             ++ALT  G +Y+ G  S +  QL +    G    R+   L    + ++A G  H   L
Sbjct: 806 QFSLALTGEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLAL 865

Query: 524 TSRTEVYTWGKGANGRL 540
           +S  E++ WG+  N ++
Sbjct: 866 SSAGEIFGWGRNDNQQI 882



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 149/342 (43%), Gaps = 58/342 (16%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN-------CNFGLLGHGNEMSLW 328
           P L++     +V+ VAC +     ++  G +Y W  S         +FG +G    +S+ 
Sbjct: 588 PALLNC--KFHVKQVACSKDIVLLLSKEGKLYNWHISKPDTEPQPLDFGDIGSETFISI- 644

Query: 329 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS 388
                          +  C   H   V +    +++G G    LGHGD  S   P +++S
Sbjct: 645 ---------------ASHCEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIES 689

Query: 389 LKGLRTVRAA-CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
           L  +R V++  CG  ++AA+               G L+TWG G+ GRLGHG  + + +P
Sbjct: 690 L--VRRVKSVYCGCSYSAAIT------------LRGNLYTWGRGNYGRLGHGISDDQCLP 735

Query: 448 TCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKL 505
           T V AL +     V+   G + T+ LT  G VY  G   YG+LG+   N  L   +   L
Sbjct: 736 TMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECL 795

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN-----FPSLVEALKDK 560
            +  V+ +  G      LT   ++Y+WGK +   LGH    +RN      P L+ +L+ K
Sbjct: 796 PR--VQRVFAGSQFSLALTGEGQLYSWGKASC--LGH-QLVERNVQGCSVPRLITSLQHK 850

Query: 561 QVKSIVCGTSFTAAIC----LHKWVSGVDQSMC--SGCRIPF 596
           ++  +  G +   A+     +  W    +Q +C  S C  P 
Sbjct: 851 RIVDVAVGVTHCLALSSAGEIFGWGRNDNQQICPASVCSEPL 892



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 117/256 (45%), Gaps = 28/256 (10%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  ++ +G    G LG   G RI   TP E  SL  LR V+ A G     AV        
Sbjct: 4069 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAVT------- 4119

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKLF  G G  GRLG G  ++  +PT + +L  V      V+ G    +ALTT
Sbjct: 4120 -----PDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4174

Query: 474  TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
             G VY  G    G+LG          ++   L    V +IACG  H A +T+   V TWG
Sbjct: 4175 DGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWG 4234

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG------ 583
            KG  GRLGHGD++D+  P LVEAL   +   I CG+     +C+    + W  G      
Sbjct: 4235 KGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGK 4294

Query: 584  VDQSMCSGCRIPFNFK 599
            + +    GC++P+  +
Sbjct: 4295 LGRGGSDGCKLPYKIE 4310



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 28/221 (12%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           +P  +ES +V  V+++ CG  ++A +T +G +++WG    GRLGHG+  D   P ++ AL
Sbjct: 683 LPTKIES-LVRRVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMAL 741

Query: 283 KNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
           K+  V  VA   G+ HT  +T  G +Y WG  + ++G LG+ +  S   P      +E +
Sbjct: 742 KDHQVVDVALGSGDAHTLCLTNEGLVYAWG--DGDYGKLGNASCNSSLQPLL----IECL 795

Query: 341 -HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG----DRISVSTPREVDSLKGLRTV 395
             V  V  G   +  +T  GQL+++G  +   LGH     +    S PR + SL+  R V
Sbjct: 796 PRVQRVFAGSQFSLALTGEGQLYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHKRIV 853

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL 436
             A GV H  A+             S+G++F WG  D  ++
Sbjct: 854 DVAVGVTHCLAL------------SSAGEIFGWGRNDNQQI 882



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 2/157 (1%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYTM 480
            GK+F  G+G  GRLG G      +P  +  L +    +V+   G    +ALT  G V++ 
Sbjct: 2964 GKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3023

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            G    G+LG          R+   L    + +IACG  H A ++S+ E+YTWG G  GRL
Sbjct: 3024 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRL 3083

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            GHGD   +  P LV AL   +V  + CG+     + L
Sbjct: 3084 GHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLAL 3120



 Score = 43.5 bits (101), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 10/110 (9%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WG+        G  +R G   G       P+ +       V ++A G  H   VT
Sbjct: 3176 GEVWTWGK--------GDYYRLGH--GGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVT 3225

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA 299
              G+V++WG+   G+ G G       P L+  L  + V  VACG  H+ A
Sbjct: 3226 DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3275


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 180/355 (50%), Gaps = 33/355 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           +ACGG H   VT+ GEV SWG    G+LG G   D + P ++ AL N  V  VACG +HT
Sbjct: 75  VACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHT 134

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
             VT  G +  WG  N   G LG G+  S  LP+ ++  L    +  ++CG  HT  ++ 
Sbjct: 135 AVVTDVGLVMCWGKGNS--GQLGQGDWTSSLLPRTVS-TLYNEKIRQIACGMAHTLALSV 191

Query: 358 AGQLFTFGDGTFGVLGHG----DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            G+++++G G  G LG G    +   V+TP++V   +  +    ACG  H  A+ +    
Sbjct: 192 NGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITD---- 247

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP-NFCQVSCGHSLTVALT 472
                +C   +LF+WG G  GRLG GD E+R  PT V   +E    C V+ G   T  L+
Sbjct: 248 -----DC---RLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLS 299

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRV-----EGKLTKNFVE-------EIACGDYHV 520
             G ++T G   YGQLG   A+ +L  +       G L  + V+       + ACGD H 
Sbjct: 300 DNGEIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHT 359

Query: 521 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+++  EV+ WG   +G+LG G T+  N P  + +L+   V  + CG   +AA+
Sbjct: 360 LVISTAGEVFAWGAAEDGQLGTGGTEGANSPVELTSLRG-LVGDVSCGLVHSAAV 413



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 163/362 (45%), Gaps = 57/362 (15%)

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL---------------VACGE 294
           K+  +  WGE   GRLGHG       PK +   K   V L               VACG 
Sbjct: 22  KRTSLQGWGEF--GRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGG 79

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
           HHT AVT  G++ +WG  N   G LG GN     +P  +   L    V  V+CG +HTAV
Sbjct: 80  HHTVAVTEDGEVVSWGWGN--EGQLGSGNAFDQTVPAVVK-ALSNHRVCGVACGYYHTAV 136

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           VT  G +  +G G  G LG GD  S   PR V +L   +  + ACG+ HT A+       
Sbjct: 137 VTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLAL------- 189

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV----PTCVAALVEPNFCQVSCGHSLTVA 470
                  +G++++WG G  G+LG G  +        P  V    E  F  ++CG    +A
Sbjct: 190 -----SVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMA 244

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           +T    +++ G    G+LG   +  +  PT V   +    +  +A G +H AVL+   E+
Sbjct: 245 ITDDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEI 304

Query: 530 YTWGKGANGRLGHGDTDDRNFPSL----------------VEALKDKQVKSIVCGTSFTA 573
           +T G+G+ G+LGHGD D    P L                +  L+DK++    CG + T 
Sbjct: 305 FTCGRGSYGQLGHGDAD----PQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTL 360

Query: 574 AI 575
            I
Sbjct: 361 VI 362



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 163/351 (46%), Gaps = 54/351 (15%)

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKL--------------------NGPLEGIHVSSV 345
           +  WG     FG LGHG+ +S   PK+L                    NG +       V
Sbjct: 26  LQGWG----EFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAI------YV 75

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 405
           +CG  HT  VT  G++ ++G G  G LG G+    + P  V +L   R    ACG +HTA
Sbjct: 76  ACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTA 135

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
            V +V            G +  WG G+ G+LG GD  + L+P  V+ L      Q++CG 
Sbjct: 136 VVTDV------------GLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGM 183

Query: 466 SLTVALTTTGHVYTMGSPVYGQLG-----DPKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
           + T+AL+  G +Y+ G+   GQLG     +  A+   P +V     + F E IACG  H 
Sbjct: 184 AHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKF-EFIACGSRHC 242

Query: 521 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV-EALKDKQVKSIVCGTSFTAAICLHK 579
             +T    +++WG GA+GRLG GD++ R  P++V  ++++ ++  +  G   TA +  + 
Sbjct: 243 MAITDDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNG 302

Query: 580 WV----SGVDQSMCSGCRIP-FNFKRKRHNCYNCGLVYCHTCSSKKSVKAS 625
            +     G    +  G   P    K+ R   + C L++      KK +KA+
Sbjct: 303 EIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAA 353



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 168/349 (48%), Gaps = 39/349 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+V  WG    +G LG         +G   D  VP  V++     V  +ACG  H A+VT
Sbjct: 89  GEVVSWG-WGNEGQLG---------SGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVT 138

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G V  WG+   G+LG G  +    P+ +  L N  +  +ACG  HT A++++G++Y+W
Sbjct: 139 DVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSW 198

Query: 310 G-GSNCNFGLLGHGNEMS-LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           G G++   G+  H  E + +  P+K+    E      ++CG  H   +T   +LF++G G
Sbjct: 199 GAGADGQLGVGKHQEETADVATPQKVRVDEE-EKFEFIACGSRHCMAITDDCRLFSWGLG 257

Query: 368 TFGVLGHGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
             G LG GD  S  +P  V  S++ LR    A G  HTA + +            +G++F
Sbjct: 258 ADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSD------------NGEIF 305

Query: 427 TWGDGDRGRLGHGD-------KEAR-LVPTC----VAALVEPNFCQVSCGHSLTVALTTT 474
           T G G  G+LGHGD       K+AR L   C    +  L +    + +CG + T+ ++T 
Sbjct: 306 TCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTA 365

Query: 475 GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
           G V+  G+   GQLG     G   + VE    +  V +++CG  H A +
Sbjct: 366 GEVFAWGAAEDGQLGTGGTEGA-NSPVELTSLRGLVGDVSCGLVHSAAV 413


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 187/398 (46%), Gaps = 29/398 (7%)

Query: 181  SGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
            +G  D D    V +WG    + +        G   G K+   VP   ++   L   +IA 
Sbjct: 1823 AGALDQDLPCTVMVWGLNDKEQL--------GGLKGSKVK--VPTFSQTISRLRPIHIAG 1872

Query: 241  GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTC 298
            G +   +V + G+V++ GE   GRLG GV  +V  P  +  L    V+ VA   G  H  
Sbjct: 1873 GSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHAL 1932

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A+TL G +++WG      G LGHGN  +L  P +L   L    +  V+CG  H+A ++S 
Sbjct: 1933 ALTLDGKVFSWG--EGEDGKLGHGNRTTLDKP-RLVETLRSKKIRDVACGSSHSAAISSQ 1989

Query: 359  GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSS 416
            G+L+T+G G +G LGHGD  +   P+ V +L G R ++ ACG     T A+ E       
Sbjct: 1990 GELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTE------- 2042

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                  G +F+WGDGD G+LG G  E    P  +  L      Q+ CG   ++ALT  G 
Sbjct: 2043 -----DGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGE 2097

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            V+T G   Y +LG          +  G L    V  +A G  H   +T   +VY WG   
Sbjct: 2098 VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 2157

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            +G+ G G+T     P+LV  L    V  + CG+S + A
Sbjct: 2158 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 2195



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 187/379 (49%), Gaps = 22/379 (5%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++      P   E+  +L    +A G +    VT  G++F+ G   
Sbjct: 2979 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 3038

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
            GGRLG G     + P L+ +L+++ V+ VA   G  H  A+T  G++Y WG      G L
Sbjct: 3039 GGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWG--EGEDGKL 3096

Query: 320  GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            GHGN MS   PK +   L G++V+ ++CG  H+A +T++G + T+G G +G LGHGD   
Sbjct: 3097 GHGNRMSYDRPKLVEH-LNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED 3155

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
               P+ V++L G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 3156 QLRPQLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGDYGKLG 3203

Query: 438  HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
             G  +   +P  + +L      +V CG   +VALT +G VYT     + +LG    +  +
Sbjct: 3204 RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVR 3263

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
             P +V     K  +  IA G  H    +   EVYTWG    G+LG G       P LV A
Sbjct: 3264 RPKKVAALQGKKIIS-IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA 3322

Query: 557  LKDKQVKSIVCGTSFTAAI 575
            L+ K +  + CG++ T A+
Sbjct: 3323 LQGKHIVKVTCGSAHTLAL 3341



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 149/307 (48%), Gaps = 19/307 (6%)

Query: 223  VPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
            +P  + S   + V+ +A   GG+H   +T +GEV++WGE   G+LGHG       PKL++
Sbjct: 3052 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 3111

Query: 281  ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
             L  +NV  +ACG  H+ A+T SG + TWG     +G LGHG+      P+ +   L G 
Sbjct: 3112 HLNGMNVADIACGSAHSAAITASGHVLTWGKG--RYGRLGHGDSEDQLRPQLVEA-LLGY 3168

Query: 341  HVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
                ++CG     T  +T    ++++GDG +G LG G       P +++SL GL  ++  
Sbjct: 3169 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 3228

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            CG   + A+ +            SG ++TW  GD  RLGHG  +    P  VAAL     
Sbjct: 3229 CGSQFSVALTK------------SGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKI 3276

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
              ++ G    VA + +G VYT G    GQLGD         R+   L    + ++ CG  
Sbjct: 3277 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 3336

Query: 519  HVAVLTS 525
            H   L++
Sbjct: 3337 HTLALST 3343



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/288 (35%), Positives = 150/288 (52%), Gaps = 29/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG          G +M    PK VE    ++V +IACG  H+A +T
Sbjct: 3083 GEVYAWGEGE-DGKLG---------HGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAIT 3132

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
              G V +WG+   GRLGHG   D   P+L++AL       +AC  G+  T  +T   +++
Sbjct: 3133 ASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 3192

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LG G      LP K+   L G+ V  V CG   +  +T +G ++T+  G
Sbjct: 3193 SWG--DGDYGKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWSKG 3249

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLF 426
             F  LGHG    V  P++V +L+G + +  A G  H  A             CS SG+++
Sbjct: 3250 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEVY 3296

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            TWGD D G+LG G   A   P  VAAL   +  +V+CG + T+AL+T+
Sbjct: 3297 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 3344



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 164/333 (49%), Gaps = 33/333 (9%)

Query: 254  VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            V  WG    E+LGG  G    S V  P     +  +    +A G      V  +G +Y  
Sbjct: 1834 VMVWGLNDKEQLGGLKG----SKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYAC 1889

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G   ++ LP +L  P+   +V    +V  G  H   +T  G++F++G
Sbjct: 1890 GEGTN---GRLGLGVTHNVPLPHQL--PVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 1944

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+R ++  PR V++L+  +    ACG  H+AA+             S G+L
Sbjct: 1945 EGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAI------------SSQGEL 1992

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  VAAL      QV+CG   + T+ALT  G V++ G  
Sbjct: 1993 YTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDG 2052

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G   P  +E +L+   V +I CG      LT   EV+TWGKG   RLGH
Sbjct: 2053 DFGKLGRGGSEGSDTPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 2111

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P  +  L+ ++V  +  G     A+
Sbjct: 2112 GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAV 2144



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 120/257 (46%), Gaps = 30/257 (11%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  ++ +G    G LG   G RI   TP E  SL  LR V+ A G     AV        
Sbjct: 2976 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAVT------- 3026

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKLF  G G  GRLG G  ++  +PT + +L  V      V+ G    +ALTT
Sbjct: 3027 -----PDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 3081

Query: 474  TGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G VY  G    G+LG   + +   P  VE  L    V +IACG  H A +T+   V TW
Sbjct: 3082 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMNVADIACGSAHSAAITASGHVLTW 3140

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG----- 583
            GKG  GRLGHGD++D+  P LVEAL   +   I CG+     +C+    + W  G     
Sbjct: 3141 GKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 3200

Query: 584  -VDQSMCSGCRIPFNFK 599
             + +    GC++P+  +
Sbjct: 3201 KLGRGGSDGCKLPYKIE 3217



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 2/158 (1%)

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYT 479
            +GK++  G+G  GRLG G      +P  +  L +    +V+   G    +ALT  G V++
Sbjct: 1883 NGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 1942

Query: 480  MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             G    G+LG          R+   L    + ++ACG  H A ++S+ E+YTWG G  GR
Sbjct: 1943 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 2002

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            LGHGD   +  P LV AL  ++V  + CG+     + L
Sbjct: 2003 LGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLAL 2040


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 179/358 (50%), Gaps = 23/358 (6%)

Query: 223  VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
            VP   ++   L   +IA G +   +V++ G+V++ GE   GRLG GV  +V  P  +  L
Sbjct: 3068 VPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3127

Query: 283  KNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
                V+ VA   G  H  A+TL G +++WG G +   G LGHGN  +L  P+ +   L  
Sbjct: 3128 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED---GKLGHGNRSTLDKPRLVEA-LRA 3183

Query: 340  IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
              +  ++CG  H+A ++S G+L+T+G G +G LGHGD  +   P+ V +L G R ++ AC
Sbjct: 3184 KKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALHGRRVIQVAC 3243

Query: 400  GV--WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
            G     T A+ E             G +F+WGDGD G+LG G  E    P  +  L    
Sbjct: 3244 GSRDAQTLALTE------------DGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG 3291

Query: 458  FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFVEEIACG 516
              Q+ CG   ++ALT  G V+T G   Y +LG     + + P  + G L    V  +A G
Sbjct: 3292 VIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVG 3350

Query: 517  DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              H   +T   +VY WG   +G+ G G+T     P+LV  L    V  + CG+S + A
Sbjct: 3351 ALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3408



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/380 (33%), Positives = 190/380 (50%), Gaps = 24/380 (6%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++      P   E+  +L    +A G +    VT  G++F+ G   
Sbjct: 4201 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATGYGS 4260

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGL 318
            GGRLG G     + P L+ +L+++ V+ VA   G  H  A+T  G++Y WG G +   G 
Sbjct: 4261 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGED---GK 4317

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
            LGHGN MS   PK L   L G+ V+ ++CG  H+A +T++G + T+G G +G LGHGD  
Sbjct: 4318 LGHGNRMSYDRPKLLEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSE 4376

Query: 379  SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS--GKLFTWGDGDRGRL 436
                P+ V++L G R +  ACG               + + C +    +++WGDGD G+L
Sbjct: 4377 DQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGDYGKL 4424

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG- 495
            G G  +   +P  + +L      +V CG   +VALT +G VYT G   + +LG    +  
Sbjct: 4425 GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV 4484

Query: 496  KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
            + P +V     K  +  IA G  H    +   EVYTWG    G+LG G       P LV 
Sbjct: 4485 RRPKKVAALQGKKII-SIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVA 4543

Query: 556  ALKDKQVKSIVCGTSFTAAI 575
            AL+ K +  + CG++ T A+
Sbjct: 4544 ALQGKHIVKVTCGSAHTLAL 4563



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 166/333 (49%), Gaps = 27/333 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+  GE T +G LG G+  +     V +   +P  V    V+    +  GG+HA  +T
Sbjct: 3097 GKVYACGEGT-NGRLGLGVTHN-----VPLPHQLP--VLHQYVVKKVAVHSGGKHALALT 3148

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G+VFSWGE   G+LGHG  S +  P+L++AL+   +  +ACG  H+ A++  G++YTW
Sbjct: 3149 LDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTW 3208

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDG 367
            G     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++GDG
Sbjct: 3209 GLG--EYGRLGHGDNATQLKPKLVTA-LHGRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3265

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             FG LG G     +TP E++ L G+  ++  CG   + A+              +G+++T
Sbjct: 3266 DFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTR------------AGEVWT 3313

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WG GD  RLGHG  +    P  +A L       V+ G    +A+T  G VY  G   +GQ
Sbjct: 3314 WGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3373

Query: 488  LGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYH 519
             G       K P  V G L   FV  +ACG  H
Sbjct: 3374 QGSGNTFVNKKPALVIG-LDAVFVNRVACGSSH 3405



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 148/307 (48%), Gaps = 19/307 (6%)

Query: 223  VPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
            +P  + S   + V+ +A   GG+H   +T  GEV++WGE   G+LGHG       PKL++
Sbjct: 4274 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLE 4333

Query: 281  ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
             L  ++V  +ACG  H+ A+T SG + TWG     +G LGHG+      PK +   L G 
Sbjct: 4334 HLNGMSVADIACGSAHSAAITASGHVLTWGKGR--YGRLGHGDSEDQLRPKLVEA-LLGY 4390

Query: 341  HVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
                ++CG     T  +T    ++++GDG +G LG G       P +++SL GL  ++  
Sbjct: 4391 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4450

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            CG   + A+ +            SG ++TWG GD  RLGHG  +    P  VAAL     
Sbjct: 4451 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4498

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
              ++ G    VA +  G VYT G    GQLGD         R+   L    + ++ CG  
Sbjct: 4499 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4558

Query: 519  HVAVLTS 525
            H   L++
Sbjct: 4559 HTLALST 4565



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/288 (35%), Positives = 150/288 (52%), Gaps = 29/288 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG          G +M    PK +E    + V +IACG  H+A +T
Sbjct: 4305 GEVYAWGE-GEDGKLG---------HGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAIT 4354

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
              G V +WG+   GRLGHG   D   PKL++AL       +AC  G+  T  +T   +++
Sbjct: 4355 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4414

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LG G      LP K+   L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 4415 SWG--DGDYGKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4471

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLF 426
             F  LGHG    V  P++V +L+G + +  A G  H  A             CS +G+++
Sbjct: 4472 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDAGEVY 4518

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            TWGD D G+LG G   A   P  VAAL   +  +V+CG + T+AL+T+
Sbjct: 4519 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4566



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 163/333 (48%), Gaps = 33/333 (9%)

Query: 254  VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            V  WG    E+LGG  G    S V  P     +  +    +A G      V+  G +Y  
Sbjct: 3047 VMVWGLNDKEQLGGLKG----SKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYAC 3102

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G   ++ LP +L  P+   +V    +V  G  H   +T  G++F++G
Sbjct: 3103 GEGTN---GRLGLGVTHNVPLPHQL--PVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3157

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+R ++  PR V++L+  +    ACG  H+AA+             S G+L
Sbjct: 3158 EGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAI------------SSQGEL 3205

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  V AL      QV+CG   + T+ALT  G V++ G  
Sbjct: 3206 YTWGLGEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3265

Query: 484  VYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G   P  +E +L+   V +I CG      LT   EV+TWGKG   RLGH
Sbjct: 3266 DFGKLGRGGSEGSATPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3324

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P  +  L+ ++V  +  G     A+
Sbjct: 3325 GGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAV 3357



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 38/317 (11%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
             ++ +AC      L+ ++G++++W           +    + P+L+D  +  N   V+ 
Sbjct: 571 FQLKQVACSEDMVVLLCQEGKLYNW----------PIAKPETEPQLLDFAEIANETFVSI 620

Query: 293 GEH----HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
             H    H  AV  + + Y+WG  +     LGHG+  +  LP K+   +    V SV CG
Sbjct: 621 AAHCEGRHFLAVDSNHNAYSWGVGDSRR--LGHGDCHARELPTKIESLVR--RVQSVYCG 676

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             ++A +T  G L+T+G GT+G LGHG+      P  V +LK  +             V+
Sbjct: 677 CSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQ-------------VL 723

Query: 409 EVMVGSSSSSNCS---SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
           +V +GS  +        G ++ WGDGD G+LG+G   + L P  +  L  P   +V  G 
Sbjct: 724 DVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECL--PRVQRVFAGS 781

Query: 466 SLTVALTTTGHVYTMG--SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
             ++ALT  G +Y+ G  S +  QL +    G    R+   L    +  +A G  H   L
Sbjct: 782 QFSLALTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLAL 841

Query: 524 TSRTEVYTWGKGANGRL 540
           +S  E++ WG+  N ++
Sbjct: 842 SSNGEIFGWGRNDNQQI 858



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 123/264 (46%), Gaps = 21/264 (7%)

Query: 150  GSDGRTGHLKGLSGDTFRVS---LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGD-GIL 204
            G DG+ GH    + D  R+     +  +   + GS H     S G+++ WG   G+ G L
Sbjct: 3159 GEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWG--LGEYGRL 3216

Query: 205  GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 262
            G G + +            PK V +     V  +ACG R A  +  T+ G VFSWG+   
Sbjct: 3217 GHGDNAT---------QLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDF 3267

Query: 263  GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
            G+LG G     + P  I+ L  I V  + CG   + A+T +G+++TWG  +  +  LGHG
Sbjct: 3268 GKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGD--YYRLGHG 3325

Query: 323  NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             +  +  P+ + G L G  V  V+ G  H   VT AGQ++ +GD   G  G G+      
Sbjct: 3326 GDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK 3384

Query: 383  PREVDSLKGLRTVRAACGVWHTAA 406
            P  V  L  +   R ACG  H+ A
Sbjct: 3385 PALVIGLDAVFVNRVACGSSHSMA 3408



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 117/256 (45%), Gaps = 28/256 (10%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  ++ +G    G LG   G RI   TP E  SL  LR ++ A G     AV        
Sbjct: 4198 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPIQLAGGEQSLFAVT------- 4248

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKLF  G G  GRLG G  ++  +PT + +L  V      V+ G    +ALTT
Sbjct: 4249 -----PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4303

Query: 474  TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
             G VY  G    G+LG          ++   L    V +IACG  H A +T+   V TWG
Sbjct: 4304 DGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWG 4363

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL----HKWVSG------ 583
            KG  GRLGHGD++D+  P LVEAL   +   I CG+     +C+    + W  G      
Sbjct: 4364 KGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGK 4423

Query: 584  VDQSMCSGCRIPFNFK 599
            + +    GC++P+  +
Sbjct: 4424 LGRGGSDGCKLPYKIE 4439



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 112/221 (50%), Gaps = 28/221 (12%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           +P  +ES +V  VQ++ CG  ++A +T +G +++WG    GRLGHG   D   P ++ AL
Sbjct: 659 LPTKIES-LVRRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMAL 717

Query: 283 KNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
           K+  V  VA   G+ HT  +T  G +Y WG  + ++G LG+G+  S   P      +E +
Sbjct: 718 KDHQVLDVALGSGDAHTLCLTRGGLVYAWG--DGDYGKLGNGSCNSSLQPLL----IECL 771

Query: 341 -HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG----DRISVSTPREVDSLKGLRTV 395
             V  V  G   +  +T  GQL+++G  +   LGH     +    S PR + SL+  R V
Sbjct: 772 PRVQRVFAGSQFSLALTCEGQLYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHKRIV 829

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL 436
             A GV H  A+         SSN   G++F WG  D  ++
Sbjct: 830 HVAVGVAHCLAL---------SSN---GEIFGWGRNDNQQI 858



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 141/334 (42%), Gaps = 56/334 (16%)

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSN-------CNFGLLGHGNEMSLWLPKKLNGP 336
              ++ VAC E     +   G +Y W  +         +F  + +   +S+         
Sbjct: 570 KFQLKQVACSEDMVVLLCQEGKLYNWPIAKPETEPQLLDFAEIANETFVSI--------- 620

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
                  +  C   H   V S    +++G G    LGHGD  +   P +++SL  +R V+
Sbjct: 621 -------AAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESL--VRRVQ 671

Query: 397 AA-CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
           +  CG  ++AA+               G L+TWG G  GRLGHG+ + + +P  V AL +
Sbjct: 672 SVYCGCSYSAAIT------------LRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKD 719

Query: 456 PNFCQVSC--GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
                V+   G + T+ LT  G VY  G   YG+LG+   N  L   +   L +  V+ +
Sbjct: 720 HQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPR--VQRV 777

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN-----FPSLVEALKDKQVKSIVCG 568
             G      LT   ++Y+WGK +   LGH    +RN      P L+ +L+ K++  +  G
Sbjct: 778 FAGSQFSLALTCEGQLYSWGKASC--LGH-QLVERNVQGCSVPRLITSLQHKRIVHVAVG 834

Query: 569 TSFTAAIC----LHKWVSGVDQSMC--SGCRIPF 596
            +   A+     +  W    +Q +C  S C  P 
Sbjct: 835 VAHCLALSSNGEIFGWGRNDNQQICPASVCSEPL 868



 Score = 43.5 bits (101), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 19/127 (14%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WG+        G  +R G   G       P+ +       V ++A G  H   VT
Sbjct: 3309 GEVWTWGK--------GDYYRLGH--GGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVT 3358

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G+V++WG+   G+ G G       P L+  L  + V  VACG  H+ A         W
Sbjct: 3359 DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA---------W 3409

Query: 310  GGSNCNF 316
            G  N + 
Sbjct: 3410 GLPNASL 3416


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 190/378 (50%), Gaps = 22/378 (5%)

Query: 203 ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 225 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 284

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
           GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 285 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 342

Query: 320 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 343 GHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 401

Query: 380 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLG 437
              P+ V++L+G R +  ACG               + + C      +++WGDGD G+LG
Sbjct: 402 QLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLG 449

Query: 438 HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 496
            G  +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  +
Sbjct: 450 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 509

Query: 497 LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
            P +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV A
Sbjct: 510 RPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 568

Query: 557 LKDKQVKSIVCGTSFTAA 574
           L+ K+V  + CG++ T A
Sbjct: 569 LQGKKVNRVACGSAHTLA 586



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 40/326 (12%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G+V+ WGE   DG LG G +RS            P+ +ES   ++V ++A GG H+A 
Sbjct: 327 SEGEVYSWGEAE-DGKLGHG-NRSPCDR--------PRVIESLRGIEVVDVAAGGAHSAC 376

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 377 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT 436

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 437 VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 495

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 496 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 543

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+             
Sbjct: 544 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 590

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEI 513
              P + GKLP +V   +  N ++EI
Sbjct: 591 --KPASAGKLPAQV--PMEYNHLQEI 612



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G ++ WG    G+LG    + V  P   +AL  +    +  GE    AVT  G +Y  G 
Sbjct: 223 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 282

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
                  +G    +S   P  L   ++ + +  V+   G  H   ++S G+++++G+   
Sbjct: 283 GAGGRLGIGGTESVST--PTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 339

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LGHG+R     PR ++SL+G+  V  A G  H+A V             ++G L+TWG
Sbjct: 340 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT------------AAGDLYTWG 387

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
            G  GRLGH D E +L P  V AL       ++CG   + T+ LT    V++ G   YG+
Sbjct: 388 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 447

Query: 488 LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG   RLGHG  D
Sbjct: 448 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 506

Query: 547 DRNFPSLVEALKDKQVKSIVCGT 569
               P  V+ L+ K+V +I  G+
Sbjct: 507 HVRRPRQVQGLQGKKVIAIATGS 529



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 222 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 272

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
              + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 273 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 329

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 330 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 389

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG----VD 585
             GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 390 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 449

Query: 586 QSMCSGCRIPFNF 598
           +    GC++P   
Sbjct: 450 RGGSDGCKVPMKI 462


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/331 (35%), Positives = 174/331 (52%), Gaps = 19/331 (5%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPKL 278
           D   P ++ + V  D+ +IA    H A +T +GEV++ G    G+LG  G++  V  P  
Sbjct: 22  DHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVV-PIR 80

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH--GNEMSLWLPKKLNGP 336
           + AL    V  +ACG  HT AVT +G + +WGG    +G LG   GN +    P+ + G 
Sbjct: 81  VAALDTHMVTHIACGFKHTVAVTETGALASWGGDE--YGQLGFDSGNIVDGVQPRIVKGS 138

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
            + +H S V+ G +HT  +T +G +++FGDG+ G LGHG+    STP  V SL GL   +
Sbjct: 139 RD-LHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQ 197

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
            ACG  H+AA+               GK+FTWG G  G+LGHG  +   +P  V ALV+ 
Sbjct: 198 IACGENHSAALT------------VDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDH 245

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
           +  Q++CG   T+A+T+ G +++ G  ++GQ G       L  +   +L    + +++ G
Sbjct: 246 DVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRVLVQVSAG 305

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
             H  VL  R EVY WG     +LG  D  D
Sbjct: 306 ARHTVVLLDRGEVYGWGDCEQRQLGTCDRCD 336



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 160/326 (49%), Gaps = 21/326 (6%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V++ G    G+LG G  SD   P  +  L   ++  +A  ++HT  +T  G++YT G ++
Sbjct: 4   VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSND 63

Query: 314 C-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
               G+ G   ++   +P ++   L+   V+ ++CG  HT  VT  G L ++G   +G L
Sbjct: 64  AGQLGVRGMEEQV---VPIRV-AALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQL 119

Query: 373 GH--GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
           G   G+ +    PR V   + L   R A G +HT A+              SG ++++GD
Sbjct: 120 GFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALT------------GSGDVYSFGD 167

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
           G  G LGHG+ +    P+ V +L      Q++CG + + ALT  G V+T G   YGQLG 
Sbjct: 168 GSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGH 227

Query: 491 PKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
               N KLP  V+  L  + V +IACG  H   +TS   +++WG G  G+ GHG  +D  
Sbjct: 228 GSTQNIKLPVAVK-ALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVL 286

Query: 550 FPSLVEALKDKQVKSIVCGTSFTAAI 575
            P  V  L+ + +  +  G   T  +
Sbjct: 287 SPKQVHQLEGRVLVQVSAGARHTVVL 312



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 126/227 (55%), Gaps = 15/227 (6%)

Query: 215 AGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
           +G  +D   P+ V+ +  L    +A GG H   +T  G+V+S+G+   G LGHG     S
Sbjct: 123 SGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCS 182

Query: 275 HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
            P L+ +L  + V  +ACGE+H+ A+T+ G ++TWG     +G LGHG+  ++ LP  + 
Sbjct: 183 TPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWG--RGKYGQLGHGSTQNIKLPVAVK 240

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
             ++   V  ++CG  HT  +TS G+LF++G G +G  GHG +  V +P++V  L+G   
Sbjct: 241 ALVDH-DVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRVL 299

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
           V+ + G  HT  +++             G+++ WGD ++ +LG  D+
Sbjct: 300 VQVSAGARHTVVLLD------------RGEVYGWGDCEQRQLGTCDR 334



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 90/163 (55%), Gaps = 3/163 (1%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V+S   L V  IACG  H+A +T  G+VF+WG    G+LGHG   ++  P  + AL 
Sbjct: 184 PSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALV 243

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           + +V  +ACG  HT A+T  G +++WG  +  +G  GHG +  +  PK+++  LEG  + 
Sbjct: 244 DHDVIQIACGGDHTLAITSDGRLFSWG--HGLWGQTGHGTKEDVLSPKQVH-QLEGRVLV 300

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
            VS G  HT V+   G+++ +GD     LG  DR   ST   +
Sbjct: 301 QVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCDRCDFSTYGHI 343


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/412 (31%), Positives = 200/412 (48%), Gaps = 29/412 (7%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G +F WG     G LGG         G K+   +P    S   L    +  G +    VT
Sbjct: 1407 GSIFGWGH-NHRGQLGGP-------EGAKVK--IPIPCPSLAALKPIQLVGGEQTLFTVT 1456

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
             +G+VF+ G   GGRLG G +  V+ P LI++++++++  V+   G  H  A++  G++Y
Sbjct: 1457 GEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVY 1516

Query: 308  TWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            +WG G +   G LGHGN  SL  P+ +   L G  +  V+ G  H+A + + G L+T+G 
Sbjct: 1517 SWGEGVD---GKLGHGNRSSLDHPRIIES-LRGDLIVKVATGGSHSAAINATGGLYTWGK 1572

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSSSSNCSSGK 424
            G +G LGH D      P+ V++LK    V  ACG     T  + E   GSS         
Sbjct: 1573 GRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSV-------- 1624

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            +++WGDGD G+LG G  +   VP  +  L+  +   V+CG   ++AL+  G VYT G   
Sbjct: 1625 VWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGD 1684

Query: 485  YGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            Y +LG     + + P  +E  L    V E++ G  H        +VYTWG    G++G G
Sbjct: 1685 YYRLGHGSDEHVRRPKLIE-SLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDG 1743

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIP 595
             T     P LV AL+   +  + CG++ T A  L      + +   +G ++P
Sbjct: 1744 TTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESHNMHKRRRTGAKLP 1795



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 188/395 (47%), Gaps = 34/395 (8%)

Query: 187 DSLGDVFIWGECTGD--GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
           D    VF+WG    D  G L G  H++            P A +    L V  +  G + 
Sbjct: 427 DCAAKVFVWGLNDKDQLGGLKGSKHKT------------PVASKDLQRLKVTQVIGGSKS 474

Query: 245 AALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
              VT  G+V++ GE   GRLG G V   VS    +   + I    V  G  H  A+T  
Sbjct: 475 LFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYD 534

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           G +Y+WG  +   G LGHG+      P+K+    E   +  +SCG  H+A + S+G L+T
Sbjct: 535 GHVYSWG--DGEEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAIGSSGTLYT 591

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--S 421
           +G G +G LGHG+  ++  P+ V +L G + V+ ACG               + + C   
Sbjct: 592 WGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACG------------SRDAQTLCLTQ 639

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            G +++WGDGD G+LG G  +   VP  V  L   +  ++ CG   ++AL+  G V+T G
Sbjct: 640 DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 699

Query: 482 SPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
              Y +LG     + + P  VEG L ++ V ++A G  H   +T   +V+ WG   +G+ 
Sbjct: 700 KGDYFRLGHGSDQHVRRPQVVEG-LREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQ 758

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G+G T     P  V+ L+  ++  + CG+S + A 
Sbjct: 759 GNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 793



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 139/289 (48%), Gaps = 27/289 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG+   +G LG          G + D+  P+ +E+     +++I+CG  H+A + 
Sbjct: 535 GHVYSWGDGE-EGKLG---------HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIG 584

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
             G +++WG  + GRLGHG +  +  PK + AL    V  VACG  +  T  +T  G +Y
Sbjct: 585 SSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVY 644

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + +FG LG G      +PK +   L G  V  + CG   +  ++  G ++T+G G
Sbjct: 645 SWG--DGDFGKLGRGGSDGCCVPKPVER-LSGQDVVKIECGAQFSLALSRCGLVWTWGKG 701

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +  LGHG    V  P+ V+ L+  + V  A G  H  AV E             G++F 
Sbjct: 702 DYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTE------------GGQVFA 749

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
           WGD D G+ G+G       P  V  L      +++CG S ++A   T H
Sbjct: 750 WGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAFADTSH 798



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G +F +G    G LG  +   V  P    SL  L+ ++   G      V          
Sbjct: 1406 SGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVT--------- 1456

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTG 475
                 GK+F  G G  GRLG G  E+  +PT + ++   +  QVS   G    +AL+  G
Sbjct: 1457 ---GEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEG 1513

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G  V G+LG    +     R+   L  + + ++A G  H A + +   +YTWGKG
Sbjct: 1514 EVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKG 1573

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
              GRLGH D++D+  P LV ALKD  V  + CG      +C+
Sbjct: 1574 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCI 1615



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 119/266 (44%), Gaps = 19/266 (7%)

Query: 150 GSDGRTGH---LKGLSGDTFRVSLSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILG 205
           G +G+ GH      L+           +   S GS H     S G ++ WG     G+ G
Sbjct: 543 GEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGH----GMYG 598

Query: 206 GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA--LVTKQGEVFSWGEELGG 263
              H      G       PK V++     V  +ACG R A    +T+ G V+SWG+   G
Sbjct: 599 RLGH------GNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFG 652

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN 323
           +LG G       PK ++ L   +V  + CG   + A++  G ++TWG  +  +  LGHG+
Sbjct: 653 KLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGD--YFRLGHGS 710

Query: 324 EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 383
           +  +  P+ + G L    V  V+ G  H   VT  GQ+F +GD   G  G+G       P
Sbjct: 711 DQHVRRPQVVEG-LREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKP 769

Query: 384 REVDSLKGLRTVRAACGVWHTAAVVE 409
            +V  L+G++  + ACG  H+ A  +
Sbjct: 770 MKVQGLEGVKITKLACGSSHSIAFAD 795



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 14/179 (7%)

Query: 407 VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ----- 460
           V +V+ GS S    +  GK++  G+   GRLG G      V   V+ L +  F Q     
Sbjct: 465 VTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGP-----VTGSVSRLTQVLFPQPIKKL 519

Query: 461 -VSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDY 518
            V  G    +ALT  GHVY+ G    G+LG   +A+   P ++E    +  + +I+CG  
Sbjct: 520 AVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIE-TFPEKCIRDISCGSS 578

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           H A + S   +YTWG G  GRLGHG+      P  V+AL  +QV  + CG+     +CL
Sbjct: 579 HSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCL 637



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 7/169 (4%)

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           + K+F WG  D+ +LG         P     L      QV  G     A+T  G VY  G
Sbjct: 429 AAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACG 488

Query: 482 SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGR 539
               G+LG     G + +R+   L    ++++A   G  H   LT    VY+WG G  G+
Sbjct: 489 ESTSGRLGLGPVTGSV-SRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGK 547

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSGV 584
           LGHG   D   P  +E   +K ++ I CG+S +AAI     L+ W  G+
Sbjct: 548 LGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGM 596


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/412 (31%), Positives = 200/412 (48%), Gaps = 29/412 (7%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G +F WG     G LGG         G K+   +P    S   L    +  G +    VT
Sbjct: 1406 GSIFGWGH-NHRGQLGGP-------EGAKVK--IPIPCPSLAALKPIQLVGGEQTLFTVT 1455

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMY 307
             +G+VF+ G   GGRLG G +  V+ P LI++++++++  V+   G  H  A++  G++Y
Sbjct: 1456 GEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVY 1515

Query: 308  TWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            +WG G +   G LGHGN  SL  P+ +   L G  +  V+ G  H+A + + G L+T+G 
Sbjct: 1516 SWGEGVD---GKLGHGNRSSLDHPRIIES-LRGDLIVKVATGGSHSAAINATGGLYTWGK 1571

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSSSSNCSSGK 424
            G +G LGH D      P+ V++LK    V  ACG     T  + E   GSS         
Sbjct: 1572 GRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSV-------- 1623

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            +++WGDGD G+LG G  +   VP  +  L+  +   V+CG   ++AL+  G VYT G   
Sbjct: 1624 VWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGD 1683

Query: 485  YGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            Y +LG     + + P  +E  L    V E++ G  H        +VYTWG    G++G G
Sbjct: 1684 YYRLGHGSDEHVRRPKLIE-SLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDG 1742

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIP 595
             T     P LV AL+   +  + CG++ T A  L      + +   +G ++P
Sbjct: 1743 TTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESHNMHKRRRTGAKLP 1794



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 188/395 (47%), Gaps = 34/395 (8%)

Query: 187 DSLGDVFIWGECTGD--GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
           D    VF+WG    D  G L G  H++            P A +    L V  +  G + 
Sbjct: 426 DCAAKVFVWGLNDKDQLGGLKGSKHKT------------PVASKDLQRLKVTQVIGGSKS 473

Query: 245 AALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
              VT  G+V++ GE   GRLG G V   VS    +   + I    V  G  H  A+T  
Sbjct: 474 LFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYD 533

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           G +Y+WG  +   G LGHG+      P+K+    E   +  +SCG  H+A + S+G L+T
Sbjct: 534 GHVYSWG--DGEEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAIGSSGTLYT 590

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--S 421
           +G G +G LGHG+  ++  P+ V +L G + V+ ACG               + + C   
Sbjct: 591 WGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACG------------SRDAQTLCLTQ 638

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            G +++WGDGD G+LG G  +   VP  V  L   +  ++ CG   ++AL+  G V+T G
Sbjct: 639 DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 698

Query: 482 SPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
              Y +LG     + + P  VEG L ++ V ++A G  H   +T   +V+ WG   +G+ 
Sbjct: 699 KGDYFRLGHGSDQHVRRPQVVEG-LREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQ 757

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G+G T     P  V+ L+  ++  + CG+S + A 
Sbjct: 758 GNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 792



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 139/289 (48%), Gaps = 27/289 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG+   +G LG          G + D+  P+ +E+     +++I+CG  H+A + 
Sbjct: 534 GHVYSWGDGE-EGKLG---------HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIG 583

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMY 307
             G +++WG  + GRLGHG +  +  PK + AL    V  VACG  +  T  +T  G +Y
Sbjct: 584 SSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVY 643

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + +FG LG G      +PK +   L G  V  + CG   +  ++  G ++T+G G
Sbjct: 644 SWG--DGDFGKLGRGGSDGCCVPKPVER-LSGQDVVKIECGAQFSLALSRCGLVWTWGKG 700

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +  LGHG    V  P+ V+ L+  + V  A G  H  AV E             G++F 
Sbjct: 701 DYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTE------------GGQVFA 748

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
           WGD D G+ G+G       P  V  L      +++CG S ++A   T H
Sbjct: 749 WGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAFADTSH 797



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            +G +F +G    G LG  +   V  P    SL  L+ ++   G      V          
Sbjct: 1405 SGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVT--------- 1455

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTG 475
                 GK+F  G G  GRLG G  E+  +PT + ++   +  QVS   G    +AL+  G
Sbjct: 1456 ---GEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEG 1512

Query: 476  HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
             VY+ G  V G+LG    +     R+   L  + + ++A G  H A + +   +YTWGKG
Sbjct: 1513 EVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKG 1572

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
              GRLGH D++D+  P LV ALKD  V  + CG      +C+
Sbjct: 1573 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCI 1614



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 119/266 (44%), Gaps = 19/266 (7%)

Query: 150 GSDGRTGH---LKGLSGDTFRVSLSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILG 205
           G +G+ GH      L+           +   S GS H     S G ++ WG     G+ G
Sbjct: 542 GEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGH----GMYG 597

Query: 206 GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA--LVTKQGEVFSWGEELGG 263
              H      G       PK V++     V  +ACG R A    +T+ G V+SWG+   G
Sbjct: 598 RLGH------GNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFG 651

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN 323
           +LG G       PK ++ L   +V  + CG   + A++  G ++TWG  +  +  LGHG+
Sbjct: 652 KLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGD--YFRLGHGS 709

Query: 324 EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 383
           +  +  P+ + G L    V  V+ G  H   VT  GQ+F +GD   G  G+G       P
Sbjct: 710 DQHVRRPQVVEG-LREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKP 768

Query: 384 REVDSLKGLRTVRAACGVWHTAAVVE 409
            +V  L+G++  + ACG  H+ A  +
Sbjct: 769 MKVQGLEGVKITKLACGSSHSIAFAD 794



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 14/179 (7%)

Query: 407 VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ----- 460
           V +V+ GS S    +  GK++  G+   GRLG G      V   V+ L +  F Q     
Sbjct: 464 VTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGP-----VTGSVSRLTQVLFPQPIKKL 518

Query: 461 -VSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDY 518
            V  G    +ALT  GHVY+ G    G+LG   +A+   P ++E    +  + +I+CG  
Sbjct: 519 AVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIE-TFPEKCIRDISCGSS 577

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           H A + S   +YTWG G  GRLGHG+      P  V+AL  +QV  + CG+     +CL
Sbjct: 578 HSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCL 636



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 7/169 (4%)

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           + K+F WG  D+ +LG         P     L      QV  G     A+T  G VY  G
Sbjct: 428 AAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACG 487

Query: 482 SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGR 539
               G+LG     G + +R+   L    ++++A   G  H   LT    VY+WG G  G+
Sbjct: 488 ESTSGRLGLGPVTGSV-SRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGK 546

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSGV 584
           LGHG   D   P  +E   +K ++ I CG+S +AAI     L+ W  G+
Sbjct: 547 LGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGM 595


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 186/383 (48%), Gaps = 47/383 (12%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPK 277
           + + P+ VE     ++  +      +  +++ G+V++WG+  GG LGH      ++  P+
Sbjct: 63  NQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPE 122

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH-------------GNE 324
           L++ L+NI ++ ++CG  H  A++  G++YTWG  N + G LGH             GN+
Sbjct: 123 LVEKLENIQIKQISCGPFHMAAISQDGELYTWG--NKDHGKLGHEIQQKSNKVEIKRGNQ 180

Query: 325 MSLW-----LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH-GDRI 378
              +     LP K+   L GI    VSCG   T V+T  G++++FG+   G LG+  +  
Sbjct: 181 NYDYAEGSMLPTKVQ-SLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEET 239

Query: 379 SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH 438
               P+++  L+ +  +   CG   +AAV             SSGK++TWG+ D G+LG+
Sbjct: 240 GNFQPKKIPDLQNI--INIDCGQQFSAAV------------SSSGKVYTWGNNDHGQLGN 285

Query: 439 GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL- 497
                +  P  V          +SCG +   AL+  G ++T G    GQLG    N    
Sbjct: 286 NQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDLYA 345

Query: 498 PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-----RNFPS 552
           P ++E    K  + ++ CG  H A LT   ++Y +G+G  G+LG G+  +     R  P 
Sbjct: 346 PKQIE---FKEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPK 402

Query: 553 LVEALKDKQVKSIVCGTSFTAAI 575
           +VE  K  +V  + CG  +T AI
Sbjct: 403 IVEFFKKMKVVDVTCGGEYTLAI 425



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 181/346 (52%), Gaps = 40/346 (11%)

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           Q  V++WG    G+LG   +++   P+ ++ L + N+  V   +  + A++  G +YTWG
Sbjct: 42  QKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWG 101

Query: 311 GSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            +    G+LGH +  S   +  +L   LE I +  +SCGP+H A ++  G+L+T+G+   
Sbjct: 102 KNKG--GILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDH 159

Query: 370 GVLGH-----GDRISVS-------------TPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           G LGH      +++ +               P +V SL G++  + +CG   T  + E  
Sbjct: 160 GKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTE-- 217

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE-ARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                     +G+++++G+  +G+LG+  +E     P  +  L   N   + CG   + A
Sbjct: 218 ----------NGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDL--QNIINIDCGQQFSAA 265

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           ++++G VYT G+  +GQLG+ ++  +  P +V G    N +  I+CGD  +A L++  ++
Sbjct: 266 VSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTG-FGGNKIINISCGDNFIAALSNEGKL 324

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +TWG G +G+LGH + +D   P  +E  K+K +K + CG + TA +
Sbjct: 325 FTWGYGNDGQLGHSNRNDLYAPKQIE-FKEKIIK-VDCGGTHTAFL 368



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 167/358 (46%), Gaps = 52/358 (14%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG+  G GILG        Y     +   P+ VE    + ++ I+CG  H A ++
Sbjct: 95  GKVYTWGKNKG-GILG-------HYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAIS 146

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSH------------------PKLIDALKNINVELVA 291
           + GE+++WG +  G+LGH +    +                   P  + +L  I  + V+
Sbjct: 147 QDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVS 206

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGH-GNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
           CG   T  +T +G++Y++G  N   G LG+   E   + PKK+  P +  ++ ++ CG  
Sbjct: 207 CGGQFTVVLTENGEVYSFG--NSMKGQLGYQSEETGNFQPKKI--P-DLQNIINIDCGQQ 261

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            +A V+S+G+++T+G+   G LG+   I  + P +V    G + +  +CG    AA+   
Sbjct: 262 FSAAVSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAAL--- 318

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                     + GKLFTWG G+ G+LGH ++     P  +    +    +V CG + T  
Sbjct: 319 ---------SNEGKLFTWGYGNDGQLGHSNRNDLYAPKQIE--FKEKIIKVDCGGTHTAF 367

Query: 471 LTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNF----VEEIAC-GDYHVAV 522
           LT    +Y  G    GQLG       +   R   K+ + F    V ++ C G+Y +A+
Sbjct: 368 LTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAI 425



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 12/201 (5%)

Query: 214 YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
           Y   +  +F PK +    + ++ NI CG + +A V+  G+V++WG    G+LG+      
Sbjct: 234 YQSEETGNFQPKKIPD--LQNIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQ 291

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
           + P  +       +  ++CG++   A++  G ++TWG  N   G LGH N   L+ PK++
Sbjct: 292 ARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGND--GQLGHSNRNDLYAPKQI 349

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV-----STPREVDS 388
               +   +  V CG  HTA +T   QL+ FG G  G LG G+ I       +TP+ V+ 
Sbjct: 350 EFKEK---IIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEF 406

Query: 389 LKGLRTVRAACGVWHTAAVVE 409
            K ++ V   CG  +T A+ E
Sbjct: 407 FKKMKVVDVTCGGEYTLAITE 427



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 22/185 (11%)

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           ++ WG G+ G+LG  ++  +  P  V  L + N  +V    S+++AL+  G VYT G   
Sbjct: 45  VYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNK 104

Query: 485 YGQLGD---PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            G LG       N   P  VE KL    +++I+CG +H+A ++   E+YTWG   +G+LG
Sbjct: 105 GGILGHYDITSFNMIQPELVE-KLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLG 163

Query: 542 HGDTDDRN------------------FPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
           H      N                   P+ V++L   + K + CG  FT  +  +  V  
Sbjct: 164 HEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYS 223

Query: 584 VDQSM 588
              SM
Sbjct: 224 FGNSM 228


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/391 (33%), Positives = 191/391 (48%), Gaps = 33/391 (8%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G+V++WG      +  GG  +  +          PK   SAV  D Q +  G     L
Sbjct: 395 SCGEVYVWGSNCTHQLAEGGQEKITT----------PKY--SAVFTDCQQVEAGQFCTFL 442

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPK--LIDALKNINVELVACGEHHTCAVTLSGD 305
           +   G V + G+   GRLG G  ++ S PK  L D      +      + H+ A+T +G+
Sbjct: 443 IYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDGHSLALTTTGE 502

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y+WG  + ++G LGHG   +  +PK + GPL G  V  VS G  H+A VT  G+L+T+G
Sbjct: 503 VYSWG--DGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWG 560

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK- 424
           DG FG LGH    S + P +V S++ +  V  ACG  HT AV +             GK 
Sbjct: 561 DGEFGRLGHDYTSSKNFPTKVQSIESVGLV--ACGGSHTLAVSQ------------DGKT 606

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           ++++G G+ G+LGHGD   +L P  + AL      +V+CG   ++A+T++G +Y  G   
Sbjct: 607 IWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGA 666

Query: 485 YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
               G  +     P  VE   +K  V +IACGD HV  LT  +EVY WG  A G+ G G 
Sbjct: 667 ILGCGSAEYTALRPRLVEDLQSKRMV-DIACGDSHVIALTHESEVYAWGNNAMGQCGQGH 725

Query: 545 TDD-RNFPSLVEALKDKQVKSIVCGTSFTAA 574
                  P  V  L    V  +  GTS + A
Sbjct: 726 AQSPITRPKRVIGLDGVSVHQVSAGTSHSVA 756



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 154/328 (46%), Gaps = 24/328 (7%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           GEV+ WG     +L  G    ++ PK      +   + V  G+   C   +  D      
Sbjct: 397 GEVYVWGSNCTHQLAEGGQEKITTPKYSAVFTD--CQQVEAGQF--CTFLIYSDGTVGAC 452

Query: 312 SNCNFGLLGHGNEMSLWLPKK-LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
              ++G LG G+  +  +PKK L        +SS      H+  +T+ G+++++GDG +G
Sbjct: 453 GKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGDYG 512

Query: 371 VLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LGHG   +   P+ V   L G      + G  H+AAV E             G+L+TWG
Sbjct: 513 KLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTE------------DGELYTWG 560

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGSPVYGQL 488
           DG+ GRLGH    ++  PT V ++       V+CG S T+A++  G  +++ G    G+L
Sbjct: 561 DGEFGRLGHDYTSSKNFPTKVQSIESVGL--VACGGSHTLAVSQDGKTIWSFGGGENGKL 618

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
           G    N +L  +V   L   ++ ++ACG      +TS  ++Y WG GA   LG G  +  
Sbjct: 619 GHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGA--ILGCGSAEYT 676

Query: 549 NF-PSLVEALKDKQVKSIVCGTSFTAAI 575
              P LVE L+ K++  I CG S   A+
Sbjct: 677 ALRPRLVEDLQSKRMVDIACGDSHVIAL 704



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 145/294 (49%), Gaps = 39/294 (13%)

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG---IHVSSVSCGPWHTAVVTSAGQ 360
           G++Y WG SNC   L   G E       K+  P           V  G + T ++ S G 
Sbjct: 397 GEVYVWG-SNCTHQLAEGGQE-------KITTPKYSAVFTDCQQVEAGQFCTFLIYSDGT 448

Query: 361 LFTFGDGTFGVLGHGDRISVSTPR----EVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
           +   G G++G LG GD  + S P+    +   +K + + + + G  H+ A+         
Sbjct: 449 VGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDG--HSLALT-------- 498

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA-LVEPNFCQVSCGHSLTVALTTTG 475
               ++G++++WGDGD G+LGHG    + +P  V   LV      VS G+  + A+T  G
Sbjct: 499 ----TTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDG 554

Query: 476 HVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWG 533
            +YT G   +G+LG D  ++   PT+V+   +   V  +ACG  H +AV      ++++G
Sbjct: 555 ELYTWGDGEFGRLGHDYTSSKNFPTKVQ---SIESVGLVACGGSHTLAVSQDGKTIWSFG 611

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
            G NG+LGHGDT+ +  P ++EAL    ++ + CG+  + A+     L+ W  G
Sbjct: 612 GGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCG 665


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 192/400 (48%), Gaps = 33/400 (8%)

Query: 181  SGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
            +G  D D    V +WG    + +        G   G K+   VP   ++   L   +IA 
Sbjct: 3086 AGALDQDLPCTVMVWGLNDKEQL--------GGLKGSKVK--VPTFSQTISRLRPIHIAG 3135

Query: 241  GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTC 298
            G +   +V + G+V++ GE   GRLG GV  +V  P  +  L    V+ VA   G  H  
Sbjct: 3136 GSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHAL 3195

Query: 299  AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+TL G +++WG G +   G LGHGN  +L  P +L   L    +  V+CG  H+A ++S
Sbjct: 3196 ALTLDGKVFSWGEGED---GKLGHGNRTTLDKP-RLVETLRSKKIRDVACGSSHSAAISS 3251

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSS 415
             G+L+T+G G +G LGHGD  +   P+ V +L G R ++ ACG     T A+ E      
Sbjct: 3252 QGELYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTE------ 3305

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                   G +F+WGDGD G+LG G  E    P  +  L      Q+ CG   ++ALT  G
Sbjct: 3306 ------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAG 3359

Query: 476  HVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
             V+T G   Y +LG     + + P  + G L    V  +A G  H   +T   +VY WG 
Sbjct: 3360 EVWTWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWGD 3418

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              +G+ G G+T     P+LV  L    V  + CG+S + A
Sbjct: 3419 NDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3458



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/380 (32%), Positives = 190/380 (50%), Gaps = 24/380 (6%)

Query: 203  ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            I G G +  G   G++      P   E+  +L    +A G +    VT  G++F+ G   
Sbjct: 4238 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4297

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG-GSNCNFGL 318
            GGRLG G     + P L+ +L+++ V+ VA   G  H  A+T  G++Y WG G +   G 
Sbjct: 4298 GGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED---GK 4354

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
            LGHGN MS   PK +   L G++V+ ++CG  H+A +T++G + T+G G +G LGHGD  
Sbjct: 4355 LGHGNRMSYDRPKLVEH-LNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSE 4413

Query: 379  SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRL 436
                P+ V++L G R +  ACG               + + C      +++WGDGD G+L
Sbjct: 4414 DQLRPQLVEALLGYRAIDIACG------------SGDAQTLCINDDDNVWSWGDGDYGKL 4461

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG- 495
            G G  +   +P  + +L      +V CG   +VALT +G VYT G   + +LG    +  
Sbjct: 4462 GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV 4521

Query: 496  KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
            + P +V     K  +  IA G  H    +   EVYTWG    G+LG G       P LV 
Sbjct: 4522 RRPKKVAALQGKKIIS-IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVA 4580

Query: 556  ALKDKQVKSIVCGTSFTAAI 575
            AL+ K +  + CG++ T A+
Sbjct: 4581 ALQGKHIVKVTCGSAHTLAL 4600



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 149/307 (48%), Gaps = 19/307 (6%)

Query: 223  VPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
            +P  + S   + V+ +A   GG+H   +T +GEV++WGE   G+LGHG       PKL++
Sbjct: 4311 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4370

Query: 281  ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
             L  +NV  +ACG  H+ A+T SG + TWG     +G LGHG+      P+ +   L G 
Sbjct: 4371 HLNGMNVADIACGSAHSAAITASGHVLTWGKG--RYGRLGHGDSEDQLRPQLVEA-LLGY 4427

Query: 341  HVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
                ++CG     T  +     ++++GDG +G LG G       P +++SL GL  ++  
Sbjct: 4428 RAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4487

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            CG   + A+ +            SG ++TWG GD  RLGHG  +    P  VAAL     
Sbjct: 4488 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4535

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
              ++ G    VA + +G VYT G    GQLGD         R+   L    + ++ CG  
Sbjct: 4536 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4595

Query: 519  HVAVLTS 525
            H   L++
Sbjct: 4596 HTLALST 4602



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/286 (35%), Positives = 146/286 (51%), Gaps = 25/286 (8%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WGE   DG LG          G +M    PK VE    ++V +IACG  H+A +T
Sbjct: 4342 GEVYAWGEGE-DGKLG---------HGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAIT 4391

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G V +WG+   GRLGHG   D   P+L++AL       +ACG      + ++ D   W
Sbjct: 4392 ASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVW 4451

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
               + ++G LG G      LP K+   L G+ V  V CG   +  +T +G ++T+G G F
Sbjct: 4452 SWGDGDYGKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDF 4510

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTW 428
              LGHG    V  P++V +L+G + +  A G  H  A             CS SG+++TW
Sbjct: 4511 HRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEVYTW 4557

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            GD D G+LG G   A   P  VAAL   +  +V+CG + T+AL+T+
Sbjct: 4558 GDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4603



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 164/333 (49%), Gaps = 33/333 (9%)

Query: 254  VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            V  WG    E+LGG  G    S V  P     +  +    +A G      V  +G +Y  
Sbjct: 3097 VMVWGLNDKEQLGGLKG----SKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYAC 3152

Query: 310  G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTFG 365
            G G+N   G LG G   ++ LP +L  P+   +V    +V  G  H   +T  G++F++G
Sbjct: 3153 GEGTN---GRLGLGVTHNVPLPHQL--PVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3207

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            +G  G LGHG+R ++  PR V++L+  +    ACG  H+AA+             S G+L
Sbjct: 3208 EGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAI------------SSQGEL 3255

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
            +TWG G+ GRLGHGD   +L P  VAAL      QV+CG   + T+ALT  G V++ G  
Sbjct: 3256 YTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3315

Query: 484  VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +G+LG   + G   P  +E +L+   V +I CG      LT   EV+TWGKG   RLGH
Sbjct: 3316 DFGKLGRGGSEGSDTPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3374

Query: 543  GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G       P  +  L+ ++V  +  G     A+
Sbjct: 3375 GGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAV 3407



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 36/309 (11%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA- 291
             VQ I C      ++++ G++++W           +    + P+L++ + +  +  +A 
Sbjct: 576 FQVQQIVCSESIVLILSEDGKLYNW----------RMFKPETEPQLLEEIAHETIVSIAS 625

Query: 292 -CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
            C   H  A+ ++ + Y+WG  N     LGHG+  +  +P K+   L    V +V CG  
Sbjct: 626 HCEGRHFMAIDINRNAYSWG--NGEDHRLGHGDTHARAVPTKIT--LLDRCVKAVFCGCS 681

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           ++A +T +G L+T+G GT+  LGHG+      P  V +L                 +++V
Sbjct: 682 YSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALT-------------EHEIIDV 728

Query: 411 MVGSSSS-SNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
            +GS  + S C  S G ++ WGD D G+LG+G+    + P  V +L  P   +V  G   
Sbjct: 729 ALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESL--PKVQRVFAGAQF 786

Query: 468 TVALTTTGHVYTMG--SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
           ++ALTT G +Y+ G  S +  QL +  A      R+   L    + ++A G  H   L+S
Sbjct: 787 SMALTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSS 846

Query: 526 RTEVYTWGK 534
             EV+ WG+
Sbjct: 847 CGEVFGWGR 855



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 135/306 (44%), Gaps = 50/306 (16%)

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HV 342
              V+ + C E     ++  G +Y W                 ++ P+     LE I H 
Sbjct: 575 KFQVQQIVCSESIVLILSEDGKLYNW----------------RMFKPETEPQLLEEIAHE 618

Query: 343 SSVS----CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           + VS    C   H   +      +++G+G    LGHGD  + + P ++  L   R V+A 
Sbjct: 619 TIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKITLLD--RCVKAV 676

Query: 399 -CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
            CG  ++AA+              SG L+TWG G   RLGHG+ + + +PT V AL E  
Sbjct: 677 FCGCSYSAAIT------------CSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHE 724

Query: 458 FCQVSCG----HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
              V+ G    HSL   LT+ GHVY  G   YG+LG+   NG +   +   L K  V+ +
Sbjct: 725 IIDVALGSGDAHSL--CLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPK--VQRV 780

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR----NFPSLVEALKDKQVKSIVCGT 569
             G      LT+  ++Y+WGK +   LGH   +      + P L+  L+ K++  +  G 
Sbjct: 781 FAGAQFSMALTTDGQLYSWGKASC--LGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGV 838

Query: 570 SFTAAI 575
           +   A+
Sbjct: 839 AHCLAL 844



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 120/257 (46%), Gaps = 30/257 (11%)

Query: 358  AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            A  ++ +G    G LG   G RI   TP E  SL  LR V+ A G     AV        
Sbjct: 4235 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAVT------- 4285

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 473
                   GKLF  G G  GRLG G  ++  +PT + +L  V      V+ G    +ALTT
Sbjct: 4286 -----PDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4340

Query: 474  TGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G VY  G    G+LG   + +   P  VE  L    V +IACG  H A +T+   V TW
Sbjct: 4341 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMNVADIACGSAHSAAITASGHVLTW 4399

Query: 533  GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK------WVSG--- 583
            GKG  GRLGHGD++D+  P LVEAL   +   I CG+     +C++       W  G   
Sbjct: 4400 GKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYG 4459

Query: 584  -VDQSMCSGCRIPFNFK 599
             + +    GC++P+  +
Sbjct: 4460 KLGRGGSDGCKLPYKIE 4476



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 2/158 (1%)

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYT 479
            +GK++  G+G  GRLG G      +P  +  L +    +V+   G    +ALT  G V++
Sbjct: 3146 NGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3205

Query: 480  MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             G    G+LG          R+   L    + ++ACG  H A ++S+ E+YTWG G  GR
Sbjct: 3206 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3265

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            LGHGD   +  P LV AL  ++V  + CG+     + L
Sbjct: 3266 LGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLAL 3303



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 46/262 (17%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFV------PKAVESAV-VLD--VQNIACGG 242
           V I   C G   +   I+R+    G   D  +       +AV + + +LD  V+ + CG 
Sbjct: 621 VSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKITLLDRCVKAVFCGC 680

Query: 243 RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAV 300
            ++A +T  G +++WG     RLGHG   D   P ++ AL    +  VA   G+ H+  +
Sbjct: 681 SYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCL 740

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS------VSCGPWHTAV 354
           T  G +Y WG  + ++G LG+GN         LNG +  + V S      V  G   +  
Sbjct: 741 TSEGHVYAWG--DADYGKLGNGN---------LNGSMSPVLVESLPKVQRVFAGAQFSMA 789

Query: 355 VTSAGQLFTFGDGTFGVLGHG--DRIS--VSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +T+ GQL+++G  +   LGH   +R +   S PR +  L+  R V  A GV H  A+   
Sbjct: 790 LTTDGQLYSWGKAS--CLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLAL--- 844

Query: 411 MVGSSSSSNCSSGKLFTWGDGD 432
                  S+C  G++F WG  D
Sbjct: 845 -------SSC--GEVFGWGRND 857



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 53/152 (34%)

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           ++WG+G+  RLGHGD  AR                                         
Sbjct: 642 YSWGNGEDHRLGHGDTHAR----------------------------------------- 660

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
                      +PT++   L    V+ + CG  + A +T    +YTWG+G   RLGHG++
Sbjct: 661 ----------AVPTKI--TLLDRCVKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNS 708

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           DD+  P++V AL + ++  +  G+    ++CL
Sbjct: 709 DDQPLPTVVMALTEHEIIDVALGSGDAHSLCL 740



 Score = 43.9 bits (102), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 19/127 (14%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G+V+ WG+        G  +R G   G       P+ +       V ++A G  H   VT
Sbjct: 3359 GEVWTWGK--------GDYYRLGH--GGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVT 3408

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G+V++WG+   G+ G G       P L+  L  + V  VACG  H+ A         W
Sbjct: 3409 DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA---------W 3459

Query: 310  GGSNCNF 316
            G  N   
Sbjct: 3460 GLPNATL 3466


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 17/305 (5%)

Query: 273 VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP 330
           VS P L++++++++++ VA   G  H  A++  G++++WG      G LGHGN  S   P
Sbjct: 375 VSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWG--EAEDGKLGHGNRNSCDRP 432

Query: 331 KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK 390
           + +   L G  V  ++ G  H+A +TS G+LFT+G G +G LGHGD      P+ V++LK
Sbjct: 433 RVIES-LRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALK 491

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
           G+R +  ACG    +   + +  +   S      +++WGDGD G+LG G  +   +P  V
Sbjct: 492 GVRVIDVACG----SGDAQTLCITDDDS------VWSWGDGDYGKLGRGGSDGCKIPQKV 541

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNF 509
            AL+     +V CG   +VALT +G VYT G   Y +LG    +  + P +V     KN 
Sbjct: 542 EALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNV 601

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           +  IA G  H    T + EV+TWG    G+LG G T     P LV AL+ K++  + CG+
Sbjct: 602 I-SIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGS 660

Query: 570 SFTAA 574
           + + A
Sbjct: 661 AHSLA 665



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 153/314 (48%), Gaps = 38/314 (12%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G+VF WGE   DG LG G   S            P+ +ES    +V +IA GG H+A 
Sbjct: 406 SEGEVFSWGEAE-DGKLGHGNRNSCDR---------PRVIESLRGKEVVDIAAGGAHSAC 455

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +T  GE+F+WG+   GRLGHG   D   PKL++ALK + V  VACG      + ++ D  
Sbjct: 456 ITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDS 515

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            W   + ++G LG G      +P+K+   L G  V  V CG   +  +T +G ++T+G G
Sbjct: 516 VWSWGDGDYGKLGRGGSDGCKIPQKVEA-LIGQGVVKVECGSQFSVALTKSGCVYTWGKG 574

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +  LGHG    V  PR+V +L+G   +  A G  H  A  +             G++FT
Sbjct: 575 DYHRLGHGSDDHVRRPRKVAALQGKNVISIATGSLHCVACTD------------QGEVFT 622

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WGD D G+LG G   A   P  VAAL      +V+CG + ++A +T+             
Sbjct: 623 WGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGSAHSLAWSTS------------- 669

Query: 488 LGDPKANGKLPTRV 501
              P   GKLP +V
Sbjct: 670 --KPVNAGKLPVQV 681



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 224 PKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           P  +ES   + ++ +A   GG+H   ++ +GEVFSWGE   G+LGHG  +    P++I++
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIES 437

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+   V  +A G  H+  +T +G+++TWG     +G LGHG+      PK +   L+G+ 
Sbjct: 438 LRGKEVVDIAAGGAHSACITSTGELFTWGKG--RYGRLGHGDSEDQMKPKLVEA-LKGVR 494

Query: 342 VSSVSC--GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           V  V+C  G   T  +T    ++++GDG +G LG G       P++V++L G   V+  C
Sbjct: 495 VIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVEC 554

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           G   + A+ +            SG ++TWG GD  RLGHG  +    P  VAAL   N  
Sbjct: 555 GSQFSVALTK------------SGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVI 602

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
            ++ G    VA T  G V+T G    GQLGD   +     R+   L    +  +ACG  H
Sbjct: 603 SIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGSAH 662



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV---------- 407
           +GQ++ +G    G LG  +   V  P   D+L  LR V+   G     AV          
Sbjct: 307 SGQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIGGEQTLFAVYATGYGAGGR 366

Query: 408 ----------------------VEVMVGSSSSSNC----SSGKLFTWGDGDRGRLGHGDK 441
                                 ++ +  +S   +C    S G++F+WG+ + G+LGHG++
Sbjct: 367 LGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNR 426

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV 501
            +   P  + +L       ++ G + +  +T+TG ++T G   YG+LG   +  ++  ++
Sbjct: 427 NSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKL 486

Query: 502 EGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD 559
              L    V ++ACG  D     +T    V++WG G  G+LG G +D    P  VEAL  
Sbjct: 487 VEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIG 546

Query: 560 KQVKSIVCGTSFTAAI----CLHKWVSG 583
           + V  + CG+ F+ A+    C++ W  G
Sbjct: 547 QGVVKVECGSQFSVALTKSGCVYTWGKG 574


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 192/376 (51%), Gaps = 18/376 (4%)

Query: 203 ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           I G G +  G   G++     VP   E+   L    +  G +    VT  G++++ G   
Sbjct: 22  IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 81

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
           GGRLG G    VS P L+++++++ ++ VA   G  H  A++  G++Y+WG      G L
Sbjct: 82  GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAEDGKL 139

Query: 320 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           GHGN      P+ +   L GI V  V+ G  H+A VT+AG L+T+G G +G LGH D   
Sbjct: 140 GHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 198

Query: 380 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
              P+ V++L+G R V  ACG    +   + +  +   +      +++WGDGD G+LG G
Sbjct: 199 QLKPKLVEALQGHRVVDIACG----SGDAQTLCLTDDDT------VWSWGDGDYGKLGRG 248

Query: 440 DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLP 498
             +   VP  + +L      +V CG   +VALT +G VYT G   Y +LG    +  + P
Sbjct: 249 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 308

Query: 499 TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
            +V+G   K  +  IA G  H    T   EVYTWG    G+LG G T+    P LV AL+
Sbjct: 309 RQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 367

Query: 559 DKQVKSIVCGTSFTAA 574
            K+V  + CG++ T A
Sbjct: 368 GKKVNRVACGSAHTLA 383



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 145/287 (50%), Gaps = 23/287 (8%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G+V+ WGE   DG LG          G +     P+ +ES   ++V ++A GG H+A 
Sbjct: 124 SEGEVYSWGEAE-DGKLG---------HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 173

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG      + L+ D  
Sbjct: 174 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 233

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G G
Sbjct: 234 VWSWGDGDYGKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 292

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +  LGHG    V  PR+V  L+G + +  A G  H     E             G+++T
Sbjct: 293 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 340

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
           WGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+
Sbjct: 341 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 387



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 162/334 (48%), Gaps = 23/334 (6%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAV 300
           GR        G ++ WG    G+LG    + V  P   +AL  +  V+L+  GE    AV
Sbjct: 10  GRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG-GEQTLFAV 68

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSA 358
           T  G +Y  G        +G    +S   P  L   ++ + +  V+   G  H   ++S 
Sbjct: 69  TADGKLYATGYGAGGRLGIGGTESVST--PTLLE-SIQHVFIKKVAVNSGGKHCLALSSE 125

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
           G+++++G+   G LGHG+R     PR ++SL+G+  V  A G  H+A V           
Sbjct: 126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT---------- 175

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGH 476
             ++G L+TWG G  GRLGH D E +L P  V AL       ++CG   + T+ LT    
Sbjct: 176 --AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 233

Query: 477 VYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           V++ G   YG+LG   ++G K+P +++  LT   V ++ CG      LT    VYTWGKG
Sbjct: 234 VWSWGDGDYGKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 292

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
              RLGHG  D    P  V+ L+ K+V +I  G+
Sbjct: 293 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS 326



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 20/227 (8%)

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           VT+ G+L+  G G  G LG G   SVSTP  ++S++ +   + A               +
Sbjct: 68  VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------N 113

Query: 415 SSSSNC----SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
           S   +C    S G++++WG+ + G+LGHG++     P  + +L       V+ G + +  
Sbjct: 114 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 173

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTE 528
           +T  G +YT G   YG+LG   +  +L  ++   L  + V +IACG  D     LT    
Sbjct: 174 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 233

Query: 529 VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           V++WG G  G+LG G +D    P  +++L    V  + CG+ F+ A+
Sbjct: 234 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 280



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 24/253 (9%)

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           +G ++ +G    G LG  +   V  P   ++L  LR V+   G     AV          
Sbjct: 19  SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 69

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTG 475
              + GKL+  G G  GRLG G  E+   PT + ++  V      V+ G    +AL++ G
Sbjct: 70  ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 126

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VY+ G    G+LG    +     RV   L    V ++A G  H A +T+  ++YTWGKG
Sbjct: 127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 186

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL------HKWVSG----VD 585
             GRLGH D++D+  P LVEAL+  +V  I CG+     +CL        W  G    + 
Sbjct: 187 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 246

Query: 586 QSMCSGCRIPFNF 598
           +    GC++P   
Sbjct: 247 RGGSDGCKVPMKI 259


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 196/389 (50%), Gaps = 34/389 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           D ++WG         GG H   + +G  ++  VP   +S  +   Q + CG     +V  
Sbjct: 489 DAYLWG---------GGRHGQLAESGRGVN--VPTVTKS--LASAQQVVCGQNCTFVVQV 535

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G + + GE   GRLG G   D+     I AL+   V  +A     + H+ A+T SG+++
Sbjct: 536 NGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVF 595

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN      P+++   L G  V +++CG  H+AVVT  G+LFTFG+G
Sbjct: 596 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LRGEEVVNMACGFKHSAVVTVDGKLFTFGNG 652

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +G LGHG+  +  TP  V +L+     + ACG+ HT  +       S+  N     ++ 
Sbjct: 653 DYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTLVL-------SADGN----TVWA 701

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +GDGD G+LG G   A+  P  +  L      ++ CG   +V LT  G V++ G      
Sbjct: 702 FGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERL-- 759

Query: 488 LGDPKANGKLPTRVEG--KLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G P+   + P + +    L  +F++++  G  HV  LTS  EV+ WG   +G+LG G +
Sbjct: 760 TGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHS 819

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           + +  P ++  LK K ++ I  G + +AA
Sbjct: 820 NAQREPCVIPDLKGKNIRQISAGRNHSAA 848



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 166/338 (49%), Gaps = 26/338 (7%)

Query: 226 AVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI 285
           A++  VV+ +        H+  +T  GEVFSWG+   G+LGHG       P+ I+AL+  
Sbjct: 566 ALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGE 625

Query: 286 NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
            V  +ACG  H+  VT+ G ++T+G  N ++G LGHGN  +   P+++   LE   +  V
Sbjct: 626 EVVNMACGFKHSAVVTVDGKLFTFG--NGDYGRLGHGNSANKKTPERVTA-LEKHAIGQV 682

Query: 346 SCGPWHTAVVTSAGQ-LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
           +CG  HT V+++ G  ++ FGDG +G LG G   + ++P+ +D L G+   +  CG   +
Sbjct: 683 ACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFS 742

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL----VPTCVAALVEPNFCQ 460
             +             + G++F++G   + RL  G  E RL     P  + AL       
Sbjct: 743 VVLT------------NDGRVFSFG---QERL-TGQPEGRLRGPQKPQQIQALASHFIDD 786

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
           V  G    +ALT+TG V+  G+ V GQLG   +N +    V   L    + +I+ G  H 
Sbjct: 787 VCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHS 846

Query: 521 AVLTSRTEVYTWGKGANG--RLGHGDTDDRNFPSLVEA 556
           A  T+      +  GA    +LGH +     FP+L E 
Sbjct: 847 AAWTAPPPPPRFPPGAPMPLQLGHPEHTPPQFPALAEV 884



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 118/236 (50%), Gaps = 18/236 (7%)

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW-- 402
           V CG   T VV   G +   G+G++G LG G+   + T   + +L+G   ++ A      
Sbjct: 523 VVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSD 582

Query: 403 -HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            H+ A+ +            SG++F+WGDGD G+LGHG+ + +  P  + AL       +
Sbjct: 583 GHSLALTD------------SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNM 630

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHV 520
           +CG   +  +T  G ++T G+  YG+LG    AN K P RV   L K+ + ++ACG  H 
Sbjct: 631 ACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTA-LEKHAIGQVACGLNHT 689

Query: 521 AVLTSR-TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            VL++    V+ +G G  G+LG G    +  P  ++ L     K I CGT F+  +
Sbjct: 690 LVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVL 745



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 163/347 (46%), Gaps = 50/347 (14%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVS-------SSSQGSGHDDGDSL-- 189
           ACG        GS GR G   G S D F +S  SA+        ++S+GS   DG SL  
Sbjct: 541 ACGE-------GSYGRLG--MGNSDDLFTLSPISALQGYVVIQIATSRGS---DGHSLAL 588

Query: 190 ---GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
              G+VF WG+  GD G LG G                P+ +E+    +V N+ACG +H+
Sbjct: 589 TDSGEVFSWGD--GDYGKLGHGNSDRQRR---------PRQIEALRGEEVVNMACGFKHS 637

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           A+VT  G++F++G    GRLGHG  ++   P+ + AL+   +  VACG +HT  ++  G+
Sbjct: 638 AVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTLVLSADGN 697

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
              W   + ++G LG G+  +   P+ ++  L GI    + CG   + V+T+ G++F+FG
Sbjct: 698 T-VWAFGDGDYGKLGLGSCTAKTSPQAID-VLAGIGCKKICCGTQFSVVLTNDGRVFSFG 755

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
                    G       P+++ +L          G  H  A+             S+G++
Sbjct: 756 QERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALT------------STGEV 803

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           + WG+   G+LG G   A+  P  +  L   N  Q+S G + + A T
Sbjct: 804 WGWGNNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHSAAWT 850


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/403 (33%), Positives = 201/403 (49%), Gaps = 30/403 (7%)

Query: 165 TFRVSLSSA-VSSSSQGSGHDDGD-SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF 222
           TFR ++S   V+S S GS H     S G    WG    DG LG          G   +  
Sbjct: 6   TFRSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGE-DGQLG---------HGDAEERK 55

Query: 223 VPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
            P+A+   +      +  G  ++ AL   + EV+SWG    GRLGHG  +DV  P+ I A
Sbjct: 56  KPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRA 115

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L   N+  VACG+ HT AVT +G+++++G  N N G LG G      LP+ +   L G  
Sbjct: 116 LAGRNIVKVACGDTHTLAVTDTGELFSFG-RNQN-GQLGLGTTSDAILPQPVE-SLRGQE 172

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V+S++CG  H+   TSAG +F +G G +G LG G       P +V  L+G++    ACG 
Sbjct: 173 VTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGW 232

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            H+ A  E            +G ++T+G    G+LGHGD   +LVP  V +L +     +
Sbjct: 233 RHSIAADE------------TGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLI 280

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
           + G   T A   +G +Y+ G   +GQLG     +   P  V+G L  + V+ ++CG  H 
Sbjct: 281 AGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVPVQG-LNTSPVKLLSCGWRHT 339

Query: 521 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
             +T   +V++WG+G NG+LGH +  D N P  +  L    +K
Sbjct: 340 FAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIK 382



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 169/361 (46%), Gaps = 20/361 (5%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L V +++CG  H+  +   G   SWG    G+LGHG   +   P+ I  L   +   V  
Sbjct: 14  LRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCS 73

Query: 293 GEHHTCAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           G  ++ A++    ++Y+WG  +  FG LGHG+   +++P+ +   L G ++  V+CG  H
Sbjct: 74  GAEYSVALSQPRNEVYSWGWGD--FGRLGHGDCNDVFIPQPIRA-LAGRNIVKVACGDTH 130

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           T  VT  G+LF+FG    G LG G       P+ V+SL+G      ACG  H+ A     
Sbjct: 131 TLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAAT--- 187

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                    S+G +F WG G  G LG G  E R +P+ V  L       V+CG   ++A 
Sbjct: 188 ---------SAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAA 238

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
             TG VYT G   YGQLG      +L  +    L  + +  IA G  H +      ++Y+
Sbjct: 239 DETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYS 298

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQS 587
           WG    G+LG G   D N P  V+ L    VK + CG   T A+     +  W  GV+  
Sbjct: 299 WGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQ 358

Query: 588 M 588
           +
Sbjct: 359 L 359



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   DS  P  V+      V+ ++CG RH   VT+ G+VFSWG  + G+LGH    D + 
Sbjct: 310 GSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNA 369

Query: 276 PKLIDALKNINVEL 289
           P  +  L   +++L
Sbjct: 370 PVRLAELSMGSIKL 383


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 203/429 (47%), Gaps = 33/429 (7%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D  VP+A E +VVL    I+ G  H+  +   G V SWG    G+LGHG   D   P ++
Sbjct: 11  DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 66

Query: 280 DALKNIN----VELVACGEHHTCAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
            A  +        +V CG  HT A +     +Y+WG  +  FG LGHGN   ++ P+ + 
Sbjct: 67  TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGD--FGRLGHGNSSDVFNPQPIQ 124

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
             L+G+ ++ ++CG  H   VT AG + ++G    G LG G+      P+++ + +G+R 
Sbjct: 125 A-LQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 183

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
              A G  HTAAV E             G L+ WG G  G LG GD++ RL+P  V+++ 
Sbjct: 184 KMIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVN 231

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEI 513
                 V+CG   T+ ++++G +YT G   YGQLG       L P ++E  L    + +I
Sbjct: 232 GQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDTTISQI 290

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           + G  H   L +  ++Y WG    G++G GD +D   P  V    +++V  + CG   T 
Sbjct: 291 SGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTL 350

Query: 574 AICLHK----WVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV--KASMA 627
           A+   K    W  G    +  G  +  N  +      + G   C    S K+V   A + 
Sbjct: 351 ALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSA-CKQLESSKAVPMSAKVW 409

Query: 628 PNPNKPYRV 636
            +P++ Y +
Sbjct: 410 VSPSERYAI 418


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 203/429 (47%), Gaps = 33/429 (7%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D  VP+A E +VVL    I+ G  H+  +   G V SWG    G+LGHG   D   P ++
Sbjct: 16  DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 71

Query: 280 DALKNIN----VELVACGEHHTCAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
            A  +        +V CG  HT A +     +Y+WG  +  FG LGHGN   ++ P+ + 
Sbjct: 72  TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGD--FGRLGHGNSSDVFNPQPIQ 129

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
             L+G+ ++ ++CG  H   VT AG + ++G    G LG G+      P+++ + +G+R 
Sbjct: 130 -ALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 188

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
              A G  HTAAV E             G L+ WG G  G LG GD++ RL+P  V+++ 
Sbjct: 189 KMIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVN 236

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEI 513
                 V+CG   T+ ++++G +YT G   YGQLG       L P ++E  L    + +I
Sbjct: 237 GQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDTTISQI 295

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           + G  H   L +  ++Y WG    G++G GD +D   P  V    +++V  + CG   T 
Sbjct: 296 SGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTL 355

Query: 574 AICLHK----WVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV--KASMA 627
           A+   K    W  G    +  G  +  N  +      + G   C    S K+V   A + 
Sbjct: 356 ALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSA-CKQLESSKAVPMSAKVW 414

Query: 628 PNPNKPYRV 636
            +P++ Y +
Sbjct: 415 VSPSERYAI 423


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 190/401 (47%), Gaps = 36/401 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        Q++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------QDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEA----LKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+        +++  I     F    C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQRLPDIDSEEYF----CVKRIFSGGDQSF 375



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVQDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 195/415 (46%), Gaps = 37/415 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLHDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDYKKQASPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R  P  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAA--ICLHKWVSGVDQSMC-----SGCRIPFNFK 599
             V+   +    +  C T   +    C+ +  SG DQS         CR P +F+
Sbjct: 339 FTVKG--NWFPYNGQCPTDIDSEEYFCVKRIFSGGDQSFAHYSNPQNCRPPDDFR 391



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   + 
Sbjct: 175 YKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYF 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 135/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLHDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGIDYKKQAS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR FP+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 190/401 (47%), Gaps = 36/401 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        Q++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------QDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEA----LKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+        +++  I     F    C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQRLPDIDSEEYF----CVKRIFSGGDQSF 375



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVQDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 195/415 (46%), Gaps = 37/415 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLHDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDYKKQASPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R  P  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAA--ICLHKWVSGVDQSMC-----SGCRIPFNFK 599
             V+   +    +  C T   +    C+ +  SG DQS         CR P +F+
Sbjct: 339 FTVKG--NWFPYNGQCPTDIDSEEYFCVKRIFSGGDQSFAHYSNPQNCRPPDDFR 391



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   + 
Sbjct: 175 YKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYF 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 135/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLHDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGIDYKKQAS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR FP+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 190/401 (47%), Gaps = 36/401 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        Q++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------QDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEA----LKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+        +++  I     F    C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQRLPDIDSEEYF----CVKRIFSGGDQSF 375



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVQDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 187/397 (47%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +  T      C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSF 375



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 187/397 (47%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +  T      C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSF 375



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/324 (34%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + N+  VACGE
Sbjct: 83  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQNIVHVACGE 140

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 141 SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 197

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 198 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 245

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D+E R  P  V  L       +SCG   T  LT
Sbjct: 246 GAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 305

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 306 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 365

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 366 FGCGARGQLGTGHTCNVKCPSPVK 389



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 166/330 (50%), Gaps = 32/330 (9%)

Query: 258 GEELGGRLGH---GVDSD----VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           G+E G  LG    G+ ++    V+ P++   + + +V+ VACG +H+  +   G++YT G
Sbjct: 47  GKENGNDLGASQPGISTNLRGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 106

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
            +    G LGH  E +   P+++ G L   ++  V+CG  H+  ++  GQLF++G   DG
Sbjct: 107 LNTK--GQLGHEREGNK--PEQI-GALADQNIVHVACGESHSLALSDRGQLFSWGAGSDG 161

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G++   D  SV+ PR +  L     ++ +CG WH  A+             + G+ FT
Sbjct: 162 QLGLMTTED--SVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFT 207

Query: 428 WGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G +  ++  P  V +L      QV+ G + + AL+ +G V+  G    G
Sbjct: 208 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAG 267

Query: 487 QLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           QLG   + + + P  V+   T+  V  I+CG+ H AVLT    V+T+G G+ G+LGH   
Sbjct: 268 QLGLSDEEDRESPCHVKLLRTQKVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 326

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +D   P  V  L   +V  I CG   T A 
Sbjct: 327 NDEVNPRRVLELMGSEVTQIACGRQHTLAF 356



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 153/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +    ++ ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 122 PEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 181

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 182 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 238

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 239 LAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGE 298

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 299 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 346

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 347 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHNGQLSARADRF 406

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 407 KYHIVKQIFSGGDQTFVLCSKYE 429



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 203 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 253

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF+WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 254 LSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 313

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 314 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 370

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 371 RGQLGTGHTCNVKCPSPV 388


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 187/397 (47%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +  T      C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSF 375



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 187/397 (47%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +  T      C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSF 375



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 187/397 (47%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +  T      C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSF 375



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 187/397 (47%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +  T      C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSF 375



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 190/414 (45%), Gaps = 36/414 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
             V+                    C+ +  SG DQS        F+    R NC
Sbjct: 339 FTVKGNWFPYTGQCPPDIDSEEYFCVKRIFSGGDQS--------FSHYSNRQNC 384



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGIDCKKQAS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 187/382 (48%), Gaps = 39/382 (10%)

Query: 216 GVKMDSFVPKAVESAVVLD--VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
           G  +   +P+      + D  V+ +ACGG H+  + + GEV++ G    G+LGH  +S+ 
Sbjct: 15  GSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEG 72

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSL-WLPK 331
           S P+LI AL   ++  VACGE H+ A++  G +++WG GS+   GL    + +++  L K
Sbjct: 73  SKPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK 132

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLK 390
           KLN       +  +SCG WH   + + GQ FT+G  ++G LG G    S ++P+ V SL 
Sbjct: 133 KLNQQT----ILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLD 188

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
           G+   + A G            G+ S +   SG +F WG    G+LG  D+  R  P  V
Sbjct: 189 GIPLAQVAAG------------GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHV 236

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFV 510
             L       +SCG   T  LT +G V+T G+   GQLG    N ++  R   +L  + V
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 511 EEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV--------------- 554
            +IACG +H +A + S   +Y +G G  G+LG G T +   PS V               
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKP 356

Query: 555 EALKDKQVKSIVCGTSFTAAIC 576
           +A K   VK I  G   T  +C
Sbjct: 357 DACKYHIVKHIFSGGDQTFVLC 378



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 161/327 (49%), Gaps = 23/327 (7%)

Query: 254 VFSWGEELGGR--LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+  +G  +   +  P++   + + NV+ VACG +H+  +   G++YT G 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           +    G LGH +E S     +L G L G H+  V+CG  H+  ++  GQ+F++G G+ G 
Sbjct: 61  NTK--GQLGHESEGS---KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115

Query: 372 LGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
           LG      +V+ PR +  L     ++ +CG WH  A+             + G+ FTWG 
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA------------ADGQFFTWGQ 163

Query: 431 GDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
              G+LG G +  ++  P  V +L      QV+ G + + AL+ +G V+  G    GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223

Query: 490 -DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
              + + + P  V+  L    V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D 
Sbjct: 224 LSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
             P  V  L   +V  I CG   T A 
Sbjct: 283 VNPRRVLELMGSEVSQIACGRHHTLAF 309


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 192/368 (52%), Gaps = 36/368 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 94

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGN-EMSLWLP---KKLNGPLEGIHVSSVSCGP 349
            H+ A++  G +++WG GS+   G LGH   E S+ +P   KKLN  +    +  VSCG 
Sbjct: 95  SHSLALSDQGQLFSWGAGSD---GQLGHTTTEDSVAIPRLIKKLNQQM----ILQVSCGN 147

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           WH   + + GQ FT+G    G LG G    S ++P+ V SL+G+   + A G        
Sbjct: 148 WHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAG-------- 199

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
               G+ S +   SG +F WG  + G+LG  D+  R  P  V  L       +SCG   T
Sbjct: 200 ----GAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHT 255

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRT 527
             LT +G V+T G+  +GQLG    N ++  R   +L  + V +IACG  H +A + S  
Sbjct: 256 AVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSG 315

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVE---ALKDKQVKSIVCGTSFTAAICLHKWVSGV 584
            +Y +G GA G+LG G T +   PS V+   A  + Q+ S     SF   I  H + SG 
Sbjct: 316 LIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSR--ADSFKYHIVKHIF-SGG 372

Query: 585 DQS--MCS 590
           DQ+  +CS
Sbjct: 373 DQTFVLCS 380


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 178/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  VSCG +H+  ++ A ++F++G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 158/329 (48%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +VSCG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+LG  + I V  PR + SL  ++ V+ +CG +H+ A+              + ++F+
Sbjct: 115 QLGLLGSEECIRV--PRNIKSLSDIQIVQVSCGYYHSLAL------------SKASEVFS 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  I CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 147/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  ++CG  H+  ++K  EVFSWG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 181/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + S GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+  YGQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K   VK I  G   T  +C
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLC 378



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             S G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------SDGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 154/326 (47%), Gaps = 33/326 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALASDGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYT 531
             + V++I  G     VL S+ E Y+
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYENYS 385



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 123/252 (48%), Gaps = 26/252 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           G +F WG  + DG LG              DS  VP+ ++      +  ++CG  H   +
Sbjct: 103 GQLFSWGAGS-DGQLG---------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL 152

Query: 249 TKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
              G+ F+WG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++LSG ++
Sbjct: 153 ASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG +N   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G
Sbjct: 213 GWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           ++G LGH        PR V  L G    + ACG  HT A V            SSG ++ 
Sbjct: 270 SYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYA 318

Query: 428 WGDGDRGRLGHG 439
           +G G RG+LG G
Sbjct: 319 FGCGARGQLGTG 330



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G    ++G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAG--SYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 187/397 (47%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +    +    C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDYEEYFCVKRIFSGGDQSF 375



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 VGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+L+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-RVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  166 bits (420), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 190/414 (45%), Gaps = 36/414 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
             V+                    C+ +  SG DQS        F+    R NC
Sbjct: 339 FTVKGNWFPYTGQCPPDIDSEEYFCVKRIFSGGDQS--------FSHYSNRQNC 384



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGIDCKKQAS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 20/344 (5%)

Query: 236  QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG-- 293
            + I CG     ++   G V + GE   GRLG G   D+   + I AL+   V  +A    
Sbjct: 3440 KQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTG 3499

Query: 294  -EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
             E H+ A+T +G++++WG  +  +G LGHGN      P+++   L G  V  V+CG  H+
Sbjct: 3500 LEGHSLALTETGEVFSWGDGD--YGKLGHGNSERQRRPRQIEA-LRGEDVLHVACGHKHS 3556

Query: 353  AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            A+VT  G+LFTFG    G LG G+  +   P +V +L+ +     ACG  HT     V+V
Sbjct: 3557 AIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHT-----VVV 3611

Query: 413  GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
             +   S      ++T+G+G+ G+LG G   A++ P  V A  + N  ++ CG   T+ALT
Sbjct: 3612 TTDRES------VWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALT 3665

Query: 473  TTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
              G VY+ G      +   D +     P +V   L++ F+E+IA G  H   LT   +V+
Sbjct: 3666 KEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMA-LSEQFIEDIAAGYEHALALTKEGDVW 3724

Query: 531  TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            +WG   +G+LG G T  +  P L+ +L+ K ++ I  G + +AA
Sbjct: 3725 SWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNHSAA 3768



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 162/317 (51%), Gaps = 22/317 (6%)

Query: 263 GRLGHGVDSDVSHPKLIDALKNINVE-LVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
           GRLG G  S+ + PKLI       ++ LV+    + HT A+   G +Y+WG  +  +G L
Sbjct: 444 GRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGD--YGKL 501

Query: 320 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           GHGN ++   PK + GP++G  V  ++ G  H+A +TS G L+T+GDG +G LGHGD  S
Sbjct: 502 GHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHS 561

Query: 380 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
            S P  V  + G+ +V  +CG   T  + +            +  ++++G GD G+LGHG
Sbjct: 562 RSIPTLVKDITGVGSV--SCGSSFTVVISQ-----------DATTVWSFGAGDNGKLGHG 608

Query: 440 DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS-PVYGQLGDPKANGKLP 498
           D      P  ++ L      +V C    ++ALT+ G V+  GS P  G  G   A   +P
Sbjct: 609 DTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLG-YGQADATFLVP 667

Query: 499 TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNFPSLVEAL 557
            R++ +     + +IA GD H   LT   +VY+WG  A+G+ G G+ +     P  V   
Sbjct: 668 KRLD-EFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLLPRKVTGF 726

Query: 558 KDKQVKSIVCGTSFTAA 574
            +  +  I  GTS + A
Sbjct: 727 DNHVIYQISVGTSHSIA 743



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 133/287 (46%), Gaps = 18/287 (6%)

Query: 307  YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            YTWGG     G L       L L   L           + CG   T V+   G +   G+
Sbjct: 3410 YTWGGGR--HGQLAESGR--LVLQPTLTSSFS--KAKQIHCGHNSTFVIEHDGTVLACGE 3463

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G++G LG G+          D L  LR + A  G   T       +   S +   +G++F
Sbjct: 3464 GSYGRLGQGNS---------DDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVF 3514

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            +WGDGD G+LGHG+ E +  P  + AL   +   V+CGH  +  +T  G ++T G+   G
Sbjct: 3515 SWGDGDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLG 3574

Query: 487  QLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGD 544
            +LG    +N KLP +V   L    VE IACG  H V V T R  V+T+G+G  G+LG G 
Sbjct: 3575 RLGLGNTSNKKLPAQVTA-LQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLGR 3633

Query: 545  TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSG 591
            T  +  P  V+A     +K I CG  FT A+     V     + C+G
Sbjct: 3634 TTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNG 3680



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 159/350 (45%), Gaps = 53/350 (15%)

Query: 139  ACGSVNSLSSGGSDGRTGHLKGLSGDTFRV----SLSSAVSSSSQGSGHDDGDSL----- 189
            ACG        GS GR G  +G S D  R+    +L   V +    S   +G SL     
Sbjct: 3460 ACGE-------GSYGRLG--QGNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTET 3510

Query: 190  GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G+VF WG+  GD G LG G                P+ +E+    DV ++ACG +H+A+V
Sbjct: 3511 GEVFSWGD--GDYGKLGHGNSERQRR---------PRQIEALRGEDVLHVACGHKHSAIV 3559

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            T  G++F++G    GRLG G  S+   P  + AL+ I VEL+ACG +HT  VT   +   
Sbjct: 3560 TVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTTDRES-V 3618

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG--- 365
            W      +G LG G   +   P+ ++     +++  + CG   T  +T  G++++ G   
Sbjct: 3619 WTFGEGEYGQLGLGRTTAKMTPQYVDA-FSKLNIKKICCGARFTLALTKEGKVYSCGHNR 3677

Query: 366  -DGTFGV-LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
             +G F V   H D      P++V +L        A G  H  A+ +             G
Sbjct: 3678 CNGIFEVDTQHADYY----PQQVMALSEQFIEDIAAGYEHALALTK------------EG 3721

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
             +++WG+   G+LG G    +  P  +++L      Q+S GH+ + A T 
Sbjct: 3722 DVWSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNHSAAWTV 3771



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 153/346 (44%), Gaps = 60/346 (17%)

Query: 130 PKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSL 189
           PK L+  E  C   N +SS GSDG T                 A++S             
Sbjct: 457 PK-LIRFEHECKIKNLVSSKGSDGHT----------------LAIASD------------ 487

Query: 190 GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           G ++ WG+  GD G LG G H +      K    +   ++  VV   + IA G RH+A +
Sbjct: 488 GRIYSWGD--GDYGKLGHGNHVTQ-----KSPKLILGPMQGKVV---RQIAVGYRHSAAI 537

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           T +G +++WG+   GRLGHG +   S P L+  +  +    V+CG   T  V +S D  T
Sbjct: 538 TSEGLLYTWGDGDYGRLGHGDNHSRSIPTLVKDITGVGS--VSCGSSFT--VVISQDATT 593

Query: 309 -WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            W     + G LGHG+   ++ PK ++  L+G+ +  V C    +  +TS GQ+F +G G
Sbjct: 594 VWSFGAGDNGKLGHGDTSRVYRPKVISN-LQGLLIRKVCCASQSSLALTSIGQVFVWGSG 652

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
                G  D  +   P+ +D  + L+ +  A G  H  A+                 +++
Sbjct: 653 PCLGYGQADA-TFLVPKRLDEFQDLQIIDIAVGDNHCLALT------------CDNDVYS 699

Query: 428 WGDGDRGRLGHGDKEA-RLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           WG+   G+ G G+  +  L+P  V         Q+S G S ++A T
Sbjct: 700 WGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVGTSHSIAWT 745



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 110/218 (50%), Gaps = 27/218 (12%)

Query: 367 GTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           G +G LG GD  + + P+ +       +K L + + + G  HT A+             S
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDG--HTLAIA------------S 486

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC-QVSCGHSLTVALTTTGHVYTM 480
            G++++WGDGD G+LGHG+   +  P  +   ++     Q++ G+  + A+T+ G +YT 
Sbjct: 487 DGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTW 546

Query: 481 GSPVYGQLGDPKANGKLPTRVEGKLTKNF--VEEIACGD-YHVAVLTSRTEVYTWGKGAN 537
           G   YG+LG    +G   +R    L K+   V  ++CG  + V +    T V+++G G N
Sbjct: 547 GDGDYGRLG----HGDNHSRSIPTLVKDITGVGSVSCGSSFTVVISQDATTVWSFGAGDN 602

Query: 538 GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G+LGHGDT     P ++  L+   ++ + C +  + A+
Sbjct: 603 GKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLAL 640



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 38/207 (18%)

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV---EPNF- 458
           H     + +  S  + +     ++ WG     +LG  + E  L+P    +     + N+ 
Sbjct: 385 HEGIFRDTVDSSLQTDHVKESHVYVWGSNSSYQLGISEPEKMLIPHLTPSFANSEQGNYG 444

Query: 459 ---------------------CQV--------SCGHSLTVALTTTGHVYTMGSPVYGQLG 489
                                C++        S GH+L +A  + G +Y+ G   YG+LG
Sbjct: 445 RLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIA--SDGRIYSWGDGDYGKLG 502

Query: 490 D-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
                  K P  + G +    V +IA G  H A +TS   +YTWG G  GRLGHGD   R
Sbjct: 503 HGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHSR 562

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
           + P+LV+ +    V S+ CG+SFT  I
Sbjct: 563 SIPTLVKDITG--VGSVSCGSSFTVVI 587



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 47/82 (57%)

Query: 222  FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
            + P+ V +     +++IA G  HA  +TK+G+V+SWG +  G+LG G       P LI +
Sbjct: 3691 YYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISS 3750

Query: 282  LKNINVELVACGEHHTCAVTLS 303
            L+   +  ++ G +H+ A T++
Sbjct: 3751 LQGKGIRQISAGHNHSAAWTVA 3772


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 190/414 (45%), Gaps = 36/414 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 605
             V+                    C+ +  SG DQS        F+    R NC
Sbjct: 339 FTVKGNWFPYTGQCPPDIDSEEYFCVKRIFSGGDQS--------FSHYSNRQNC 384



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGIDCKKQAS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 191/398 (47%), Gaps = 24/398 (6%)

Query: 207  GIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 266
            G  R G  A +   + VP  VES  +   + I CG     ++   G V + GE   GRLG
Sbjct: 3333 GSDRHGQLAELGYSASVPVQVESFSI--ARKIICGQNCTFVIQSDGTVLACGEGSYGRLG 3390

Query: 267  HGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMYTWGGSNCNFGLLGHGN 323
             G   D+    +I +L+   +  +A     + H+ A+  SG++++WG  +  FG LGHGN
Sbjct: 3391 QGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGD--FGKLGHGN 3448

Query: 324  EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 383
                  P+++   L+   V  V+CG  H+AVVTS G+LFTFG+G FG LG G   +   P
Sbjct: 3449 PDRQRRPRQIEA-LQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKLP 3507

Query: 384  REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA 443
              V +L+G R  + ACG+ HTA V           +     ++T+G+GD G+LG G    
Sbjct: 3508 ERVMALEGYRIGQVACGLNHTACV-----------STDGMTVWTFGEGDYGKLGLGYATM 3556

Query: 444  RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEG 503
            +L+P  V  +      +V CG  LT+ LT  G V+  G          +       ++  
Sbjct: 3557 KLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRERAVFKPQIMT 3616

Query: 504  KLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
             L+   +E++A G  HV  LT+  +V  WG    G+LG         P ++  L DK ++
Sbjct: 3617 SLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEIITELSDKGIR 3676

Query: 564  SIVCGTSFTAAIC---LHKWVSGVDQSMCSGCRIPFNF 598
             I  G + +AA     L + V GV +S+  G  +P N 
Sbjct: 3677 QISTGRTHSAAWSAPPLPQRVPGVTRSLTFG--LPANI 3712



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 180/390 (46%), Gaps = 38/390 (9%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           DV++WG  +   +  G   +            +   V+S +   VQ +  G      +  
Sbjct: 349 DVYVWGSNSSHQLAEGNQEK------------ILMPVKSKMFTQVQQVEAGQYCTFAIHW 396

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  S+ S PK I  L +  V+ ++     + HT A+  +G +Y
Sbjct: 397 DGSVSACGKGSYGRLGLGESSNQSLPKRI--LLDCVVKKLSSSKGSDGHTLALAETGVVY 454

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  +  +G LGHGN  +   P+++ GP  G  +  +  G  H+A VT  G+L+T+G+G
Sbjct: 455 SWGDGD--YGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEG 512

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGK-L 425
             G LGHGD  +   P +V  L               A V  V  GSS +   S  GK +
Sbjct: 513 DHGRLGHGDSNARYVPTQVAGL---------------AEVGSVACGSSHTLVVSKDGKTV 557

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           +++G G+ G+LG G+      P  V AL      +V  G   ++ALTT G VYT GS   
Sbjct: 558 WSFGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAI 617

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
              G   A   LP  VE  L +  + +I+ GD H   LT   EV+ WG  + G+ G G T
Sbjct: 618 LGKGSADAIVNLPMYVE-DLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHT 676

Query: 546 -DDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                 P  V  L+   ++ I  GTS + A
Sbjct: 677 CSPITRPLKVIGLEGVSIRQISAGTSHSMA 706



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 157/331 (47%), Gaps = 23/331 (6%)

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           V ++ +V+ WG     +L  G    +  P  + +     V+ V  G++ T A+   G + 
Sbjct: 344 VYEKSDVYVWGSNSSHQLAEGNQEKILMP--VKSKMFTQVQQVEAGQYCTFAIHWDGSVS 401

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             G  +  +G LG G   +  LPK++        +SS      HT  +   G ++++GDG
Sbjct: 402 ACGKGS--YGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGHTLALAETGVVYSWGDG 459

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAA-CGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            +G LGHG+  +   P  +      +T++    G  H+AAV +             GKL+
Sbjct: 460 DYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTD------------DGKLY 507

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGSPVY 485
           TWG+GD GRLGHGD  AR VPT VA L E     V+CG S T+ ++  G  V++ GS  +
Sbjct: 508 TWGEGDHGRLGHGDSNARYVPTQVAGLAEVG--SVACGSSHTLVVSKDGKTVWSFGSGEH 565

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           G+LG  +       +V   L    ++++  G +    LT+  EVYTWG GA   LG G  
Sbjct: 566 GKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGA--ILGKGSA 623

Query: 546 DD-RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           D   N P  VE L   ++  I  G +   A+
Sbjct: 624 DAIVNLPMYVEDLAQYRIVDISAGDNHCLAL 654



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 138/288 (47%), Gaps = 28/288 (9%)

Query: 307  YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS-SVSCGPWHTAVVTSAGQLFTFG 365
            Y WG          HG    L     +   +E   ++  + CG   T V+ S G +   G
Sbjct: 3330 YMWGSDR-------HGQLAELGYSASVPVQVESFSIARKIICGQNCTFVIQSDGTVLACG 3382

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW---HTAAVVEVMVGSSSSSNCSS 422
            +G++G LG G+   + +   + SL+G      A  V    H+ A+ E            S
Sbjct: 3383 EGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAE------------S 3430

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
            G++F+WGDGD G+LGHG+ + +  P  + AL      QV+CG   +  +T+ G ++T G+
Sbjct: 3431 GEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGN 3490

Query: 483  PVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVA-VLTSRTEVYTWGKGANGRL 540
              +G+LG    AN KLP RV   L    + ++ACG  H A V T    V+T+G+G  G+L
Sbjct: 3491 GDFGKLGLGSVANKKLPERVMA-LEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKL 3549

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL--HKWVSGVDQ 586
            G G    +  P  VE + +  +K + CGT  T  +      +V G+D+
Sbjct: 3550 GLGYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDR 3597



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 162/363 (44%), Gaps = 54/363 (14%)

Query: 136 SESACGSVNSLSSGGSDGRTGHLKGLSGDTF--RVSLSSAVS--SSSQGSGHDDGDSL-- 189
           S SACG        GS GR G L   S  +   R+ L   V   SSS+GS   DG +L  
Sbjct: 399 SVSACGK-------GSYGRLG-LGESSNQSLPKRILLDCVVKKLSSSKGS---DGHTLAL 447

Query: 190 ---GDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
              G V+ WG+  GD G LG G   +          F+ K +        + I  G RH+
Sbjct: 448 AETGVVYSWGD--GDYGKLGHGNCATHKQPERITGPFLGKTI--------KYIHAGYRHS 497

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDALKNINVELVACGEHHTCAVTLSG 304
           A VT  G++++WGE   GRLGHG DS+  + P  +  L  +    VACG  HT  V+  G
Sbjct: 498 AAVTDDGKLYTWGEGDHGRLGHG-DSNARYVPTQVAGLAEVGS--VACGSSHTLVVSKDG 554

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
               W   +   G LG G    ++ P+ +   L+G+ +  V  G W +  +T+AG+++T+
Sbjct: 555 KT-VWSFGSGEHGKLGTGELGKVYRPQVVEA-LQGLTIQKVCAGTWFSMALTTAGEVYTW 612

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G G     G  D I V+ P  V+ L   R V  + G  H  A+ +              +
Sbjct: 613 GSGAILGKGSADAI-VNLPMYVEDLAQYRIVDISAGDNHCLALTD------------EHE 659

Query: 425 LFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQVSCGHSLTVA---LTTTGHVYTM 480
           +F WG    G+ G G   + +  P  V  L   +  Q+S G S ++A   ++T  H  T 
Sbjct: 660 VFAWGTNSMGQCGQGHTCSPITRPLKVIGLEGVSIRQISAGTSHSMAWTSMSTENHHMTK 719

Query: 481 GSP 483
             P
Sbjct: 720 HKP 722


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGLDCKKQTSPQLIKSLVGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWFPYSGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  +   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGLDCKKQTS-PQLIKSLVGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 114/324 (35%), Positives = 173/324 (53%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGHG + +   P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN--KPEQIGALADQHIVHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G D  S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D+E R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGHG E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHGREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG-DKEARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G D  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKDFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G +  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKDFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHRGQLSATADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 110/218 (50%), Gaps = 15/218 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDA 281
           VP+ ++      +  ++CG  H   +   G+ F+WG+   G+LG G D    + P+ + +
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRS 186

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+ I +  VA G  H+ A++LSG ++ WG +N   G LG  +E     P  +   L    
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA--GQLGLSDEEDRESPCHVK-LLRTQK 243

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HTAV+T +G +FTFG G+ G LGH        PR V  L G    + ACG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
            HT A V            SSG ++ +G G RG+LG G
Sbjct: 304 QHTLAFVP-----------SSGLIYAFGCGARGQLGTG 330


>gi|290987325|ref|XP_002676373.1| RhoGEF domain-containing protein [Naegleria gruberi]
 gi|284089975|gb|EFC43629.1| RhoGEF domain-containing protein [Naegleria gruberi]
          Length = 1196

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 103/295 (34%), Positives = 148/295 (50%), Gaps = 32/295 (10%)

Query: 359  GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            G  +T+G G  G LGHG++     P  +     L     AC     AAV+          
Sbjct: 928  GDAYTWGQGASGSLGHGNQEDKKEPLVMKDFLYLDVSMVACENSAGAAVM---------- 977

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT-TGHV 477
               +G+LFTWG G++GRLGH  +  R +P            Q++ G + +  +T   G V
Sbjct: 978  --FTGELFTWGKGEKGRLGH--ETFRNMPVK----------QIAAGSAHSGCITEGDGAV 1023

Query: 478  YTMGSPVYGQLGDPKANGKL-PTRVE-GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            Y  GS +YGQ+G+      L P RV+ GKL     +++ CG  HV VL     VY WG G
Sbjct: 1024 YMWGSGIYGQIGNNTNTHALTPMRVKFGKLK---AKQLVCGVNHVLVLMEDGSVYGWGAG 1080

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIP 595
              GRLG+G+  D+  P  +    DK V+ +  G S +AA+C H+WV   D   C  C+  
Sbjct: 1081 TYGRLGNGNESDQRVPVRINFFDDKNVRGLGAGGSSSAAVCAHQWVPDKDADDCMSCKSK 1140

Query: 596  FNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATET 650
            F F R+RH+C  CG ++C +C+ K+          ++P RVCDNC+  LT A +T
Sbjct: 1141 FTFLRRRHHCRYCGGIFCGSCTGKRITLLRFG--FDEPVRVCDNCYQILTNAAQT 1193



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 31/249 (12%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            PK     +V D++N     +      + G+ ++WG+   G LGHG   D   P ++    
Sbjct: 902  PKFAPITIVHDMENEK--QKFKEQFERIGDAYTWGQGASGSLGHGNQEDKKEPLVMKDFL 959

Query: 284  NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
             ++V +VAC      AV  +G+++TWG      G LGH                  + V 
Sbjct: 960  YLDVSMVACENSAGAAVMFTGELFTWGKGEK--GRLGHET-------------FRNMPVK 1004

Query: 344  SVSCGPWHTAVVTSA-GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
             ++ G  H+  +T   G ++ +G G +G +G+       TP  V     L+  +  CGV 
Sbjct: 1005 QIAAGSAHSGCITEGDGAVYMWGSGIYGQIGNNTNTHALTPMRV-KFGKLKAKQLVCGVN 1063

Query: 403  HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
            H   ++E             G ++ WG G  GRLG+G++  + VP  +    + N   + 
Sbjct: 1064 HVLVLME------------DGSVYGWGAGTYGRLGNGNESDQRVPVRINFFDDKNVRGLG 1111

Query: 463  CGHSLTVAL 471
             G S + A+
Sbjct: 1112 AGGSSSAAV 1120



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 27/202 (13%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            + +GD + WG+    G LG G            D   P  ++  + LDV  +AC     A
Sbjct: 925  ERIGDAYTWGQ-GASGSLGHGNQE---------DKKEPLVMKDFLYLDVSMVACENSAGA 974

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT-CAVTLSGD 305
             V   GE+F+WG+   GRLGH            +  +N+ V+ +A G  H+ C     G 
Sbjct: 975  AVMFTGELFTWGKGEKGRLGH------------ETFRNMPVKQIAAGSAHSGCITEGDGA 1022

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            +Y WG     +G +G+        P ++      +    + CG  H  V+   G ++ +G
Sbjct: 1023 VYMWGSG--IYGQIGNNTNTHALTPMRVK--FGKLKAKQLVCGVNHVLVLMEDGSVYGWG 1078

Query: 366  DGTFGVLGHGDRISVSTPREVD 387
             GT+G LG+G+      P  ++
Sbjct: 1079 AGTYGRLGNGNESDQRVPVRIN 1100



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 6   IFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALIS 51
           IFQ+Y  P+ E  SFSL+Y DR+LD++CKDK E   W  G+  L+S
Sbjct: 838 IFQKYKNPDLEGLSFSLLYRDRTLDIVCKDKQEYHTWVQGITYLLS 883


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 178/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F++G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCNKQASPQLIKSLTGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 156/329 (47%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +VSCG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+LG  + I V  PR + SL  ++ V+ ACG +H+ A+              + ++F+
Sbjct: 115 QLGLLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFS 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D   +  P  + +L    F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  I CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 148/301 (49%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVFSWG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGID 174

Query: 271 SD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
            +  + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 192/368 (52%), Gaps = 36/368 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 94

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGN-EMSLWLP---KKLNGPLEGIHVSSVSCGP 349
            H+ A++  G +++WG GS+   G LGH   E S+ +P   KKLN  +    +  VSCG 
Sbjct: 95  SHSLALSDQGQLFSWGAGSD---GQLGHTTTEDSVAIPRLIKKLNQQM----ILQVSCGN 147

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           WH   + + GQ FT+G    G LG G    S ++P+ V SL+G+   + A G        
Sbjct: 148 WHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAG-------- 199

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
               G+ S +   SG +F WG  + G+LG  D+  R  P  V  L       +SCG   T
Sbjct: 200 ----GAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHT 255

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRT 527
             LT +G V+T G+  +GQLG    N ++  R   +L  + V +IACG  H +A + S  
Sbjct: 256 AVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSG 315

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVE---ALKDKQVKSIVCGTSFTAAICLHKWVSGV 584
            +Y +G GA G+LG G T +   PS V+   A  + Q+ S     SF   I  H + SG 
Sbjct: 316 LIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSS--RADSFKYHIVKHIF-SGG 372

Query: 585 DQS--MCS 590
           DQ+  +CS
Sbjct: 373 DQTFVLCS 380


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 187/397 (47%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +    +    C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDYEEYFCVKRIFSGGDQSF 375



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 VGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+L+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-RVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 187/397 (47%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +    +    C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDYEEYFCVKRIFSGGDQSF 375



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 VGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+L+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-RVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 176/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++  G+ F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 156/329 (47%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +VSCG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+LG  + I V  PR + SL  ++ V+ ACG +H+ A+               G+ F 
Sbjct: 115 QLGLLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKEGEFFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  I CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 147/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K+GE F WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGLDCKKQASPKLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+               +    C+ +  SG DQS 
Sbjct: 339 FTVKGNWLPYNGQCPPDIDYEDYFCVKRIFSGGDQSF 375



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + PKL+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGLDCKKQAS-PKLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGLDCKKQASPKLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+               +    C+ +  SG DQS 
Sbjct: 339 FTVKGNWLPYNGQCPPDIDYEDYFCVKRIFSGGDQSF 375



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + PKL+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGLDCKKQAS-PKLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLVGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+L+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFV----EEIACGDYHVAVLTSRTEVYTWGKGANG 538
             YGQLG          +   +L K+ V     ++A G  H  VLT    ++ WG+   G
Sbjct: 164 NKYGQLG---LGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 186/401 (46%), Gaps = 28/401 (6%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 592
             V+                    C+ +  SG DQS    C
Sbjct: 339 FTVKGNWLPYNGQCPPDIDSEEYFCVKRIFSGGDQSFSHYC 379



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGIDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 193/420 (45%), Gaps = 39/420 (9%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           +  WG  +   +  GGI         K D FV K         V+++ CG RH   V   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNK--------KVRDVGCGLRHTVFVLDD 52

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG- 310
           G V++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            S+   GL   G+E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G
Sbjct: 111 DSDGQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 371 VLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG G      T P+ + SL G+  ++ A G  H+  +              SG +F WG
Sbjct: 168 QLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT------------LSGAIFGWG 215

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
               G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDR 548
               + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 549 NFPSLVEA---LKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMC-----SGCRIPFNFKR 600
             P  V+      + Q    +    +    C+ +  SG DQS         C  P +F+R
Sbjct: 336 KSPFTVKGNWFSYNGQCPQDIGSEDY---FCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 131/262 (50%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG      GS   ++    VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWG-LDSDGQLG----LQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVF WG+   G+LG G++    + P+LI +L  I    VA G  H+  +TLSG ++ 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E   ++P  L   L    +  + CG  HTA +T  G +FTFG G 
Sbjct: 214 WGRNK--FGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    + ACG  HT+A V            SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 186/401 (46%), Gaps = 28/401 (6%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 592
             V+                    C+ +  SG DQS    C
Sbjct: 339 FTVKGNWLPYNGQCPPDIDSEEYFCVKRIFSGGDQSFSHYC 379



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGIDCKKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 180/366 (49%), Gaps = 53/366 (14%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           IACG  H AL+T+ G++F +G    G+LG G    V+ P  + ALK+  V+LVACG +HT
Sbjct: 41  IACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHT 100

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-----GPLEGIHVSSVSCGPWHT 352
              T  G +Y  GG+  + G LG G+       K+L+     GP     +  ++ G   +
Sbjct: 101 LICTAKGKVYASGGN--SEGQLGLGDCEERTSFKRLDFFDSQGP-----IKMLAAGSNTS 153

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           A +T +G+LF +GD T G +G G    VS+P+EV   + +  V  +CG +H+A V     
Sbjct: 154 AALTVSGKLFMWGDNTEGQIGLGKESQVSSPQEVSVGQPISWV--SCGYYHSALVT---- 207

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKE--ARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                     G L+T+G+ D G+LG G  +     VP  V ++ EP   QV+CG   TVA
Sbjct: 208 --------VDGALYTFGERDSGKLGLGTHQLPGHRVPQLVKSIKEP-VRQVACGGGHTVA 258

Query: 471 LTTTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           L   G+VYT G   +GQLG        ++P  VE    K    ++ CG+ H AV+T    
Sbjct: 259 L-AEGNVYTFGLGQFGQLGHGTFIFESRVPRLVE-HFKKGRACQVVCGENHTAVITEDGL 316

Query: 529 VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
           +YT+G G +G+LG G+ +  N                     F   +CL      V  +M
Sbjct: 317 LYTFGDGRHGKLGLGEENFTN--------------------QFKPTLCLRFLKYNVQGAM 356

Query: 589 CSGCRI 594
           C GC +
Sbjct: 357 CGGCHM 362



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 158/316 (50%), Gaps = 29/316 (9%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G K+    P  V++     VQ +ACG  H  + T +G+V++ G    G+LG G   + + 
Sbjct: 71  GSKVTVNKPTCVKALKSEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTS 130

Query: 276 PKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
            K +D   +   ++++A G + + A+T+SG ++ WG  +   G +G G E  +  P++++
Sbjct: 131 FKRLDFFDSQGPIKMLAAGSNTSAALTVSGKLFMWG--DNTEGQIGLGKESQVSSPQEVS 188

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGL 392
               G  +S VSCG +H+A+VT  G L+TFG+   G LG G         P+ V S+K  
Sbjct: 189 ---VGQPISWVSCGYYHSALVTVDGALYTFGERDSGKLGLGTHQLPGHRVPQLVKSIK-- 243

Query: 393 RTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD--KEARLVPTC 449
             VR  ACG  HT A+ E             G ++T+G G  G+LGHG    E+R VP  
Sbjct: 244 EPVRQVACGGGHTVALAE-------------GNVYTFGLGQFGQLGHGTFIFESR-VPRL 289

Query: 450 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN--GKLPTRVEGKLTK 507
           V    +   CQV CG + T  +T  G +YT G   +G+LG  + N   +    +  +  K
Sbjct: 290 VEHFKKGRACQVVCGENHTAVITEDGLLYTFGDGRHGKLGLGEENFTNQFKPTLCLRFLK 349

Query: 508 NFVEEIACGDYHVAVL 523
             V+   CG  H+ VL
Sbjct: 350 YNVQGAMCGGCHMVVL 365



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 150/298 (50%), Gaps = 23/298 (7%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           LKN     +ACG+ HT  +T +G ++ +G +  N+G LG G+++++  P  +   L+   
Sbjct: 33  LKNDIPLRIACGDEHTALITENGKLFMFGSN--NWGQLGLGSKVTVNKPTCVKA-LKSEK 89

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  V+CG  HT + T+ G+++  G  + G LG GD    ++ + +D       ++     
Sbjct: 90  VQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKMLAAG 149

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            +T+A + V           SGKLF WGD   G++G G KE+++      ++ +P    V
Sbjct: 150 SNTSAALTV-----------SGKLFMWGDNTEGQIGLG-KESQVSSPQEVSVGQP-ISWV 196

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF---VEEIACGDY 518
           SCG+  +  +T  G +YT G    G+LG      +LP     +L K+    V ++ACG  
Sbjct: 197 SCGYYHSALVTVDGALYTFGERDSGKLG--LGTHQLPGHRVPQLVKSIKEPVRQVACGGG 254

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H   L +   VYT+G G  G+LGHG    +   P LVE  K  +   +VCG + TA I
Sbjct: 255 HTVAL-AEGNVYTFGLGQFGQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVI 311



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 96/189 (50%), Gaps = 18/189 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F+WG+ T   I            G+  +S V    E +V   +  ++CG  H+ALVT
Sbjct: 160 GKLFMWGDNTEGQI------------GLGKESQVSSPQEVSVGQPISWVSCGYYHSALVT 207

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
             G ++++GE   G+LG G      H  P+L+ ++K   V  VACG  HT A+   G++Y
Sbjct: 208 VDGALYTFGERDSGKLGLGTHQLPGHRVPQLVKSIKE-PVRQVACGGGHTVALA-EGNVY 265

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           T+G     FG LGHG  +      +L    +      V CG  HTAV+T  G L+TFGDG
Sbjct: 266 TFGLG--QFGQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGDG 323

Query: 368 TFGVLGHGD 376
             G LG G+
Sbjct: 324 RHGKLGLGE 332


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 190/399 (47%), Gaps = 32/399 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D FV K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQIAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAA--ICLHKWVSGVDQSM 588
             V+   +    +  C   F +    C+ +  SG DQS 
Sbjct: 339 FTVKG--NWFPYNGQCPPDFDSEEYFCVKRIFSGGDQSF 375



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    +A G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFVNK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ IA G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGIDCKKQAS-PQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 190/399 (47%), Gaps = 32/399 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D FV K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQIAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAA--ICLHKWVSGVDQSM 588
             V+   +    +  C   F +    C+ +  SG DQS 
Sbjct: 339 FTVKG--NWFPYNGQCPPDFDSEEYFCVKRIFSGGDQSF 375



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    +A G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFVNK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ IA G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGIDCKKQAS-PQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 180/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + +   P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGN--KPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + S GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+  YGQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K   VK I  G   T  +C
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLC 378



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHVREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             S G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------SDGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 111/218 (50%), Gaps = 15/218 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDA 281
           VP+ ++      +  ++CG  H   +   G+ F+WG+   G+LG G +    + P+ + +
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 186

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+ I +  VA G  H+ A++LSG ++ WG +N   G LG  +E     P  +   L    
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQK 243

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HTAV+T +G +FTFG G++G LGH        PR V  L G    + ACG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
            HT A V            SSG ++ +G G RG+LG G
Sbjct: 304 QHTLAFVP-----------SSGLIYAFGCGARGQLGTG 330



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G    ++G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAG--SYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 182/366 (49%), Gaps = 37/366 (10%)

Query: 166 FRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKM--DSFV 223
           F VS   ++SS S  S     +  GDV++WG        G   +      G+    D  +
Sbjct: 631 FNVSDICSISSGSYYSAALTEN--GDVYMWGR-------GSVKNPPVPVLGIPQIEDQLL 681

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  +ES  + D+  ++ G  H+A V   GE+ +WG    G+LGHG   +   PK+I +L 
Sbjct: 682 PIKLES--LTDIVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLT 739

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           +  +  V CGE HT  +T +G +YTWG S   +G LG G+      P  +   LE  +V 
Sbjct: 740 SFWITQVQCGEKHTICLTKNGKVYTWGSS--EYGQLGLGDTTRYCKPMPVTA-LEKYNVL 796

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            ++ G  H AV+T++ ++  FG+G    +G    IS+  P  V SLK L   +  CG + 
Sbjct: 797 QIASGSTHCAVLTNSKEVLVFGNG--AAMGAASIISI--PTLVPSLKYLHIDKLCCGHYS 852

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           TAA+          S C  G ++TWG G    LGHG+ +    P  V AL   +  Q+SC
Sbjct: 853 TAAI----------SEC--GDVYTWGTGQ--ELGHGNNQTESTPKLVEALRNQSIRQISC 898

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD-YHVAV 522
           G   T  LT +G ++T G   +GQLG    +   P ++E  LTK     ++CG+ Y++A+
Sbjct: 899 GGRHTAFLTDSGRIFTSGKDSFGQLGHQAGDQNKPKKIES-LTKTTFISVSCGENYNIAL 957

Query: 523 L-TSRT 527
             T+R+
Sbjct: 958 FDTTRS 963



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 157/328 (47%), Gaps = 27/328 (8%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE---LVACGEHHTCAVTLSGDMYTWG 310
           + +WG     +LG  V S        + L N NV     ++ G +++ A+T +GD+Y WG
Sbjct: 600 LMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWG 659

Query: 311 -GS--NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            GS  N    +LG        LP KL   L  I V  VS G +H+A V + G+L T+G G
Sbjct: 660 RGSVKNPPVPVLGIPQIEDQLLPIKLES-LTDIVV--VSIGFYHSAAVRANGELLTWGVG 716

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G LGHGD  +   P+ + SL      +  CG  HT  + +            +GK++T
Sbjct: 717 EEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTK------------NGKVYT 764

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG  + G+LG GD      P  V AL + N  Q++ G +    LT +  V   G+   G 
Sbjct: 765 WGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGN---GA 821

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
                +   +PT V   L    ++++ CG Y  A ++   +VYTWG G    LGHG+   
Sbjct: 822 AMGAASIISIPTLVPS-LKYLHIDKLCCGHYSTAAISECGDVYTWGTGQ--ELGHGNNQT 878

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            + P LVEAL+++ ++ I CG   TA +
Sbjct: 879 ESTPKLVEALRNQSIRQISCGGRHTAFL 906



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 172/359 (47%), Gaps = 33/359 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+ + +  V D+ +I+ G  ++A +T+ G+V+ WG    G + +     +  P++ D L 
Sbjct: 625 PERLPNFNVSDICSISSGSYYSAALTENGDVYMWGR---GSVKNPPVPVLGIPQIEDQLL 681

Query: 284 NINVE------LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL 337
            I +E      +V+ G +H+ AV  +G++ TWG      G LGHG+  +   PK +   L
Sbjct: 682 PIKLESLTDIVVVSIGFYHSAAVRANGELLTWGVGEE--GQLGHGDTQNQVEPKVIQS-L 738

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
               ++ V CG  HT  +T  G+++T+G   +G LG GD      P  V +L+    ++ 
Sbjct: 739 TSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQI 798

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           A G  H A +             +S ++  +G+G       G      +PT V +L   +
Sbjct: 799 ASGSTHCAVL------------TNSKEVLVFGNG----AAMGAASIISIPTLVPSLKYLH 842

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQ-LGDPKANGKLPTRVEGKLTKNFVEEIACG 516
             ++ CGH  T A++  G VYT G+   GQ LG      +   ++   L    + +I+CG
Sbjct: 843 IDKLCCGHYSTAAISECGDVYTWGT---GQELGHGNNQTESTPKLVEALRNQSIRQISCG 899

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             H A LT    ++T GK + G+LGH    D+N P  +E+L      S+ CG ++  A+
Sbjct: 900 GRHTAFLTDSGRIFTSGKDSFGQLGH-QAGDQNKPKKIESLTKTTFISVSCGENYNIAL 957



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 140/300 (46%), Gaps = 31/300 (10%)

Query: 296 HTCAVTL--SGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           H  A+ L  S  + TWG  SNC  G      E S   P++L        + S+S G +++
Sbjct: 588 HRSAIHLDTSRGLMTWGSASNCKLGFKVASKEQSQPTPERLPN-FNVSDICSISSGSYYS 646

Query: 353 AVVTSAGQLFTFGDGTFG-----VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           A +T  G ++ +G G+       VLG         P +++SL  +  V  + G +H+AAV
Sbjct: 647 AALTENGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDI--VVVSIGFYHSAAV 704

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
                        ++G+L TWG G+ G+LGHGD + ++ P  + +L      QV CG   
Sbjct: 705 R------------ANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKH 752

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           T+ LT  G VYT GS  YGQLG               L K  V +IA G  H AVLT+  
Sbjct: 753 TICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSK 812

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
           EV  +G GA      G     + P+LV +LK   +  + CG   TAAI     ++ W +G
Sbjct: 813 EVLVFGNGA----AMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTG 868


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 178/367 (48%), Gaps = 28/367 (7%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           +  WG  +   +  GGI         K D F+ K         V+++ CG RH   V   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG- 310
           G V++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            S+   GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G
Sbjct: 111 DSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 371 VLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG G D    ++P+ + SL G+  ++ A G  H+  +              SG +F WG
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT------------LSGAIFGWG 215

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
               G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDR 548
               + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 549 NFPSLVE 555
             P  V+
Sbjct: 336 KSPFTVK 342



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 158/329 (48%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +VSCG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+LG  + I V  PR + SL  ++ V+ ACG +H+ A+ +            + ++F 
Sbjct: 115 QLGLLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  I CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLVGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+L+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFV----EEIACGDYHVAVLTSRTEVYTWGKGANG 538
             YGQLG          +   +L K+ V     ++A G  H  VLT    ++ WG+   G
Sbjct: 164 NKYGQLG---LGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 177/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D FV K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQIAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 157/329 (47%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +VSCG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+LG  + I V  PR + SL  ++ V+ ACG +H+ A+              + ++F 
Sbjct: 115 QLGLLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F Q++ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  I CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    +A G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 185/382 (48%), Gaps = 39/382 (10%)

Query: 216 GVKMDSFVPKAVESAVVLD--VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
           G  +   +P+      + D  V+ +ACGG H+  + + GEV++ G    G+LGH  D + 
Sbjct: 15  GSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--DCEG 72

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSL-WLPK 331
           S P+ I AL   ++  VACGE H+ A++  G +++WG GS+   GL    + +++  L K
Sbjct: 73  SKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIK 132

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLK 390
           KLN       +  VSCG WH   + + GQ FT+G  ++G LG G    S ++P+ V SL 
Sbjct: 133 KLNQQT----ILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLD 188

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
           G+   + A G            G+ S +   SG +F WG    G+LG  D+  R  P  V
Sbjct: 189 GIPLAQVAAG------------GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHV 236

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFV 510
             L       +SCG   T  LT +G V+T G+   GQLG    N ++  R   +L  + V
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 511 EEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV--------------- 554
            +IACG +H +A + S   +Y +G G  G+LG G T +   PS V               
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKP 356

Query: 555 EALKDKQVKSIVCGTSFTAAIC 576
           +A K   VK I  G   T  +C
Sbjct: 357 DACKYHIVKHIFSGGDQTFVLC 378



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 162/327 (49%), Gaps = 23/327 (7%)

Query: 254 VFSWGEELGGR--LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+  +G  +   +  P++   + + NV+ VACG +H+  +   G++YT G 
Sbjct: 1   MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           +    G LGH  E S   P+++ G L G H+  V+CG  H+  ++  GQLF++G G+ G 
Sbjct: 61  NTK--GQLGHDCEGS--KPEQI-GALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQ 115

Query: 372 LGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
           LG      +V+ PR +  L     ++ +CG WH  A+             + G+ FTWG 
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGQ 163

Query: 431 GDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
              G+LG G +  ++  P  V +L      QV+ G + + AL+ +G V+  G    GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223

Query: 490 -DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
              + + + P  V+  L    V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D 
Sbjct: 224 LSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
             P  V  L   +V  I CG   T A 
Sbjct: 283 VNPRRVLELMGSEVSQIACGRHHTLAF 309



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 120/251 (47%), Gaps = 24/251 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F WG    DG LG           ++    VP+ ++      +  ++CG  H   + 
Sbjct: 103 GQLFSWG-AGSDGQLG--------LTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALA 153

Query: 250 KQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
             G+ F+WG+   G+LG G +    + P+ + +L  I +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG ++   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G+
Sbjct: 214 WGKNSS--GQLGLSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G LGH        PR V  L G    + ACG  HT A V            SSG ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVP-----------SSGMIYAF 319

Query: 429 GDGDRGRLGHG 439
           G G RG+LG G
Sbjct: 320 GCGTRGQLGTG 330



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 11/110 (10%)

Query: 485 YGQLGDPKANGKLPT-----RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           Y   G P     L       +V G +    V+E+ACG  H   L    EVYT G    G+
Sbjct: 6   YSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQ 65

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVD 585
           LGH     +  P  + AL  + +  + CG S + A+     L  W +G D
Sbjct: 66  LGHDCEGSK--PEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSD 113


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 177/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 157/329 (47%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +VSCG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+LG  + I V  PR + SL  ++ V+ ACG +H+ A+              + ++F 
Sbjct: 115 QLGLLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  I CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLVGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+L+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  +   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLLKSLVGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 177/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 157/329 (47%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +VSCG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+LG  + I V  PR + SL  ++ V+ ACG +H+ A+              + ++F 
Sbjct: 115 QLGLLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  I CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V EIACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 190/399 (47%), Gaps = 32/399 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQIAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAA--ICLHKWVSGVDQSM 588
             V+   +    +  C   F +    C+ +  SG DQS 
Sbjct: 339 FTVKG--NWFPYNGQCPPDFDSEEYFCVKRIFSGGDQSF 375



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    +A G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ IA G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGIDCKKQAS-PQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 190/399 (47%), Gaps = 32/399 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQIAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAA--ICLHKWVSGVDQSM 588
             V+   +    +  C   F +    C+ +  SG DQS 
Sbjct: 339 FTVKG--NWFPYNGQCPPDFDSEEYFCVKRIFSGGDQSF 375



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    +A G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ IA G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGIDCKKQAS-PQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 190/399 (47%), Gaps = 32/399 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQIAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAA--ICLHKWVSGVDQSM 588
             V+   +    +  C   F +    C+ +  SG DQS 
Sbjct: 339 FTVKG--NWFPYNGQCPPDFDSEEYFCVKRIFSGGDQSF 375



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    +A G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ IA G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGIDCKKQAS-PQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 164/343 (47%), Gaps = 17/343 (4%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
           V+ I CG     L+   G VF+ GE   GRLG G   D      I  L+   +  +A   
Sbjct: 321 VREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSL 380

Query: 293 -GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
            G+ HT AV  SG++++WG  +  +G LGHGN      PK++   L+  HV   SCG  H
Sbjct: 381 GGDGHTLAVADSGEVFSWGDGD--YGKLGHGNSERQRKPKQIIA-LQAEHVVQASCGFKH 437

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +AV+T  G++FTFG G +G+LG G      TP+ + SLK     + ACG  HT A+    
Sbjct: 438 SAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALAN-- 495

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                    +  KL+ WGDG+ G+LG G    R +P  V +       +++CG   ++ L
Sbjct: 496 ---------NGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVL 546

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
            T G++YT G   +  + +         ++   L  + + +IA G  ++  L +   ++ 
Sbjct: 547 ATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWG 606

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           WG    G+LG G T+    P LV       +  +  GT+  AA
Sbjct: 607 WGTNEEGQLGIGTTNPHYLPQLVCTFSGTNITRLSAGTTHCAA 649



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 124/239 (51%), Gaps = 16/239 (6%)

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC- 399
            V  + CG   T ++ + G +F  G+GT+G LG G      +   +  L+G   ++ A  
Sbjct: 320 QVREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATS 379

Query: 400 --GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
             G  HT AV +            SG++F+WGDGD G+LGHG+ E +  P  + AL   +
Sbjct: 380 LGGDGHTLAVAD------------SGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEH 427

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG- 516
             Q SCG   +  LT  G V+T G   YG LGD   + +   ++   L    + +IACG 
Sbjct: 428 VVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGK 487

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           D+ +A+  +  ++Y WG G  G+LG G T  R+ P+LV++ ++  +K I CG+ F+  +
Sbjct: 488 DHTLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVL 546



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 153/328 (46%), Gaps = 25/328 (7%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V+ WG  + G L          P L+   K   V  + CG++ T  +  +G ++  G   
Sbjct: 290 VYVWGSNIHGELPGLQGKTCLQPNLVSTFKQ--VREIVCGQNCTFLLQTNGSVFACGEGT 347

Query: 314 CNFGLLGHG---NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
             +G LG G   +E SL    +L G    I +++   G  HT  V  +G++F++GDG +G
Sbjct: 348 --YGRLGQGTSDDEHSLVPITELQGYCI-IQLATSLGGDGHTLAVADSGEVFSWGDGDYG 404

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LGHG+      P+++ +L+    V+A+CG  H+A + +             GK+FT+G 
Sbjct: 405 KLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTK------------DGKVFTFGQ 452

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGSPVYGQLG 489
           G  G LG G    +  P  + +L   +  Q++CG   T+AL   G  +Y  G   +G+LG
Sbjct: 453 GQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLG 512

Query: 490 DPKANGK-LPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
               + + +P  V+    +N  +++IACG     VL +   +YT+G      +   D  D
Sbjct: 513 LGSTSVRSIPNLVDSY--RNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLD 570

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              P +V +L    +  I  G ++  A+
Sbjct: 571 NTIPQIVSSLMPHPIIDIAVGCNYILAL 598



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 142/295 (48%), Gaps = 31/295 (10%)

Query: 174 VSSSSQGSGHD--DGDSLGDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESA 230
           +++S  G GH     DS G+VF WG+  GD G LG G     S    K     PK + + 
Sbjct: 376 LATSLGGDGHTLAVADS-GEVFSWGD--GDYGKLGHG----NSERQRK-----PKQIIAL 423

Query: 231 VVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV 290
               V   +CG +H+A++TK G+VF++G+   G LG G +S    P+LI +LKN ++  +
Sbjct: 424 QAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHISQI 483

Query: 291 ACGEHHTCAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           ACG+ HT A+  +G  +Y WG     FG LG G+     +P  ++     + +  ++CG 
Sbjct: 484 ACGKDHTLALANNGKKLYAWGDG--EFGKLGLGSTSVRSIPNLVDS-YRNVCLKKIACGS 540

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             + V+ + G L+TFG   F  +   D +  + P+ V SL     +  A G  +  A+  
Sbjct: 541 KFSIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALD- 599

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
                      +SG ++ WG  + G+LG G      +P  V      N  ++S G
Sbjct: 600 -----------NSGNIWGWGTNEEGQLGIGTTNPHYLPQLVCTFSGTNITRLSAG 643


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V EIACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K +        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRI--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V EIACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYAYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V EIACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 176/346 (50%), Gaps = 24/346 (6%)

Query: 216 GVKMDSFVPKAVESAVVLD--VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
           G  +   VP+      + D  V+ +ACGG H+  + + GEV++ G    G+LGH  D + 
Sbjct: 15  GSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--DCEG 72

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSL-WLPK 331
           S P+ I AL   ++  VACGE H+ A++  G +++WG GS+   GL    + +++  L K
Sbjct: 73  SKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIK 132

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLK 390
           KLN       +  VSCG WH   + + GQ FT+G  ++G LG G    S ++P+ V SL 
Sbjct: 133 KLNQQT----ILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLD 188

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
           G+   + A G            G+ S +   SG +F WG    G+LG  D+  R  P  V
Sbjct: 189 GIPLAQVAAG------------GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHV 236

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFV 510
             L       +SCG   T  LT +G V+T G+   GQLG    N ++  R   +L  + V
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 511 EEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
            +IACG +H +A + S   +Y +G G  G+LG G T +   PS V+
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 162/327 (49%), Gaps = 23/327 (7%)

Query: 254 VFSWGEELGGR--LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+  +G  +   V  P++   + + NV+ VACG +H+  +   G++YT G 
Sbjct: 1   MLCWGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           +    G LGH  E S   P+++ G L G H+  V+CG  H+  ++  GQLF++G G+ G 
Sbjct: 61  NTK--GQLGHDCEGSK--PEQI-GALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115

Query: 372 LGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
           LG      +V+ PR +  L     ++ +CG WH  A+             + G+ FTWG 
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGQ 163

Query: 431 GDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
              G+LG G +  ++  P  V +L      QV+ G + + AL+ +G V+  G    GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223

Query: 490 -DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
              + + + P  V+  L    V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D 
Sbjct: 224 LSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
             P  V  L   +V  I CG   T A 
Sbjct: 283 VNPRRVLELMGSEVSQIACGRHHTLAF 309



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 138/273 (50%), Gaps = 19/273 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACG 293
           + ++ACG  H+  ++ QG++FSWG    G+LG     D V+ P+LI  L    +  V+CG
Sbjct: 86  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCG 145

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIHVSSVSCGPWHT 352
             H  A+   G  +TWG +  ++G LG G E  S   P+++   L+GI ++ V+ G  H+
Sbjct: 146 NWHCLALAADGQFFTWGQN--SYGQLGLGKECPSQASPQRVKS-LDGIPLAQVAAGGAHS 202

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             ++ +G +F +G  + G LG  D     +P  V  L+  + V  +CG  HTA + +   
Sbjct: 203 FALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK--- 259

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                    SG +FT+G G  G+LGH      + P  V  L+     Q++CG   T+A  
Sbjct: 260 ---------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310

Query: 473 -TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 503
            ++G +Y  G    GQLG     N K P+ V+G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 121/251 (48%), Gaps = 24/251 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F WG  + DG LG           ++    VP+ ++      +  ++CG  H   + 
Sbjct: 103 GQLFSWGAGS-DGQLG--------LTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALA 153

Query: 250 KQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
             G+ F+WG+   G+LG G +    + P+ + +L  I +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG ++   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G+
Sbjct: 214 WGKNSS--GQLGLSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G LGH        PR V  L G    + ACG  HT A V            SSG ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVP-----------SSGMIYAF 319

Query: 429 GDGDRGRLGHG 439
           G G RG+LG G
Sbjct: 320 GCGTRGQLGTG 330


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 192/417 (46%), Gaps = 39/417 (9%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D FV K V        +++ CG RH   V   G V
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G+E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G      T P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIECQKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEA---LKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMC-----SGCRIPFNFKR 600
             V+      + Q    +    +    C+ +  SG DQS         C  P +F+R
Sbjct: 339 FTVKGNWFSYNGQCPQDIGSEDY---FCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G++
Sbjct: 119 QGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 133/275 (48%), Gaps = 23/275 (8%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N ++G LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASYGQLGLGGIDEEIVLEPRKSDFFVNK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLG-HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
             YGQLG      K   P  ++  L   F++ +A G  H  VLT    ++ WG+   G+L
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|149391549|gb|ABR25792.1| zinc finger protein [Oryza sativa Indica Group]
          Length = 171

 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/175 (54%), Positives = 111/175 (63%), Gaps = 10/175 (5%)

Query: 844  DVIKSLTAQLKDMAEMLPVGAVRNSN--SFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPN 901
            +VIKSLTAQLK MAE LP G  +NS        P P+ ++SS A E   SP +    I N
Sbjct: 1    EVIKSLTAQLKGMAERLPGGVTKNSKLPPLSGFPMPS-ELSSMATESLGSPSSVGEQISN 59

Query: 902  GSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITL 961
            G N L+ SNG       S  + +A H E   KN +R  +AE     EWVEQDE GVYITL
Sbjct: 60   GPNGLLASNGP------SSVRIKAGHPE-VGKNGSRLPEAESCHEAEWVEQDEPGVYITL 112

Query: 962  VALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSIGRE 1016
             ALPGG +DLKRVRFSRK+FSE QAEQWW  NR RVYQ YNV MV+KS+ SI  E
Sbjct: 113  TALPGGARDLKRVRFSRKRFSETQAEQWWQENRTRVYQHYNVRMVEKSASSIDNE 167


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 192/417 (46%), Gaps = 39/417 (9%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D FV K V        +++ CG RH   V   G V
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G+E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G      T P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIECQKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEA---LKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMC-----SGCRIPFNFKR 600
             V+      + Q    +    +    C+ +  SG DQS         C  P +F+R
Sbjct: 339 FTVKGNWFSYNGQCPQDIGSEDY---FCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G++
Sbjct: 119 QGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 133/275 (48%), Gaps = 23/275 (8%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N ++G LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASYGQLGLGGIDEEIVLEPRKSDFFVNK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLG-HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
             YGQLG      K   P  ++  L   F++ +A G  H  VLT    ++ WG+   G+L
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K +        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRI--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V EIACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYAYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K +        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRI--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V EIACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYAYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 172/341 (50%), Gaps = 29/341 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GDV++WG  +   +    +   G+  G   D  +P  VES  + +V  ++ G  H+A + 
Sbjct: 643 GDVYMWGRGS---VKNPPLSTLGN--GSLEDQLLPTKVES--LSEVVLVSIGYYHSAALK 695

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             GE+ +WG    G+LGHG   + + PK++  + +  V  V CGE HT  +T +G ++TW
Sbjct: 696 SNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTW 755

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G S   +G LG G+      P  L   LE  ++  ++CG  H AV+T+A ++  FG+G  
Sbjct: 756 GTS--EYGQLGLGDTQKNCTP-MLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNG-- 810

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
             +G  + ISV  P  V +LK L   R +CG + TAA+ E             G ++TWG
Sbjct: 811 AAMGSANIISV--PMMVPALKHLNIERLSCGHYSTAALTEC------------GDVYTWG 856

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            G    LGHG  ++ L P  V  L   +  Q+SCG      LT +G +YT G   +GQLG
Sbjct: 857 SGQ--ELGHGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLG 914

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
             + +   P +++  L   F+  ++CG+ H A L   T  +
Sbjct: 915 HAQGDQNKPKKIDSLLKTTFI-SVSCGENHNASLFDTTRSF 954



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 180/359 (50%), Gaps = 33/359 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE-----ELGGRLGHGVDSDVSHPKL 278
           P+ + +  + ++ +I+CG  ++A +T+ G+V+ WG           LG+G   D   P  
Sbjct: 615 PERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTK 674

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPL 337
           +++L    V LV+ G +H+ A+  +G++ TWG G +   G LGHG+ ++  +PK +   +
Sbjct: 675 VESLSE--VVLVSIGYYHSAALKSNGELLTWGCGED---GQLGHGDVLNQTIPKVVQT-M 728

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
               V+ V CG  HT  +T  G++FT+G   +G LG GD     TP  V SL+    ++ 
Sbjct: 729 TSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQI 788

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           ACG  H A +             ++ ++  +G+G       G      VP  V AL   N
Sbjct: 789 ACGSTHCAVLT------------NAREVLVFGNG----AAMGSANIISVPMMVPALKHLN 832

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQ-LGDPKANGKLPTRVEGKLTKNFVEEIACG 516
             ++SCGH  T ALT  G VYT GS   GQ LG      +L  ++   L    + +I+CG
Sbjct: 833 IERLSCGHYSTAALTECGDVYTWGS---GQELGHGTNQSELHPKLVDGLRSQSIRQISCG 889

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             H+A LT   ++YT GK   G+LGH    D+N P  +++L      S+ CG +  A++
Sbjct: 890 GRHMAFLTDSGKIYTCGKDPFGQLGHAQ-GDQNKPKKIDSLLKTTFISVSCGENHNASL 947



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 19/212 (8%)

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G    G   S +TP  + +         +CG +++AA+ E            +G ++ W
Sbjct: 601 LGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTE------------NGDVYMW 648

Query: 429 GDGD-----RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           G G         LG+G  E +L+PT V +L E     VS G+  + AL + G + T G  
Sbjct: 649 GRGSVKNPPLSTLGNGSLEDQLLPTKVESLSE--VVLVSIGYYHSAALKSNGELLTWGCG 706

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
             GQLG      +   +V   +T ++V ++ CG+ H   LT   +V+TWG    G+LG G
Sbjct: 707 EDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLG 766

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           DT     P LV +L+   +  I CG++  A +
Sbjct: 767 DTQKNCTPMLVTSLEKYNIIQIACGSTHCAVL 798


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 171/342 (50%), Gaps = 35/342 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKM--DSFVPKAVESAVVLDVQNIACGGRHAAL 247
            GDV++WG        G     +    G+    D  +P  +ES  + DV +++ G  H A 
Sbjct: 768  GDVYLWGR-------GAVKTPAVPILGIPQIEDQLLPFKLES--LSDVVSVSIGFCHGAA 818

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            V   GE+ +WG    G+LGHG  ++   PK+I +L +  +  V CGE HT  +T +G +Y
Sbjct: 819  VRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVY 878

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG S   +G LG G+      P +++  LE  +V  ++ G  H AV+T++ ++  FG+G
Sbjct: 879  SWGAS--EYGQLGLGDVTQHSSPMQVSA-LEKYNVLQIASGSTHCAVLTTSKEVLVFGNG 935

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
                   G    VS P  V SLK L   R  CG + TAA+ E          C  G ++T
Sbjct: 936  A----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITE----------C--GDVYT 979

Query: 428  WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            WG G    LGHG       P  + AL   +  Q+SCG   T  LT +G ++T G   +GQ
Sbjct: 980  WGTGQ--ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQ 1037

Query: 488  LGDPKANGKLPTRVEGKLTKNFVEEIACGD-YHVAVL-TSRT 527
            LG    +   P R+E  LTK     ++CG+ Y+VA+  T+R+
Sbjct: 1038 LGQMSGDQNKPKRIES-LTKTTFISVSCGENYNVALFDTTRS 1078



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 254  VFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELV---ACGEHHTCAVTLSGDMYTW 309
            + +WG     +LG  V + D S P   + L N N+  +   + G +++  +T +GD+Y W
Sbjct: 715  LMTWGSASNCKLGFKVTAKDQSQPT-PERLPNFNIPDICSISSGSYYSSVLTENGDVYLW 773

Query: 310  GGSNCN---FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            G          +LG        LP KL    +   V SVS G  H A V + G+L T+G 
Sbjct: 774  GRGAVKTPAVPILGIPQIEDQLLPFKLESLSD---VVSVSIGFCHGAAVRANGELLTWGV 830

Query: 367  GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G  G LGHGD  +   P+ + SL      +  CG  HT  + +            +GK++
Sbjct: 831  GENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTK------------NGKVY 878

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            +WG  + G+LG GD      P  V+AL + N  Q++ G +    LTT+  V   G+   G
Sbjct: 879  SWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN---G 935

Query: 487  QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
                  +   LPT V   L    ++ + CG Y  A +T   +VYTWG G    LGHG   
Sbjct: 936  AAMGAASVVSLPTLVPS-LKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNS 992

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                P L+EAL+++ ++ I CG   TA +
Sbjct: 993  TETSPKLIEALRNQSIRQISCGGRHTAFL 1021



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 160/337 (47%), Gaps = 35/337 (10%)

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL------VACGEHHTCAV 300
            ++T+ G+V+ WG    G +       +  P++ D L    +E       V+ G  H  AV
Sbjct: 763  VLTENGDVYLWGR---GAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFCHGAAV 819

Query: 301  TLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
              +G++ TWG G N   G LGHG+  +   PK +   L    ++ V CG  HT  +T  G
Sbjct: 820  RANGELLTWGVGEN---GQLGHGDTNNQIEPKIIQS-LTSFWITQVQCGEKHTICLTKNG 875

Query: 360  QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            +++++G   +G LG GD    S+P +V +L+    ++ A G  H A +            
Sbjct: 876  KVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLT----------- 924

Query: 420  CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
             +S ++  +G+G       G      +PT V +L   +  ++ CGH  T A+T  G VYT
Sbjct: 925  -TSKEVLVFGNGA----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYT 979

Query: 480  MGSPVYGQ-LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
             G+   GQ LG    + +   ++   L    + +I+CG  H A LT    ++T GK + G
Sbjct: 980  WGT---GQELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFG 1036

Query: 539  RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +LG   + D+N P  +E+L      S+ CG ++  A+
Sbjct: 1037 QLGQM-SGDQNKPKRIESLTKTTFISVSCGENYNVAL 1072



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 7/165 (4%)

Query: 422 SGKLFTWGDGDRGR-----LGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
           +G ++ WG G         LG    E +L+P  + +L +     VS G     A+   G 
Sbjct: 767 NGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD--VVSVSIGFCHGAAVRANGE 824

Query: 477 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           + T G    GQLG    N ++  ++   LT  ++ ++ CG+ H   LT   +VY+WG   
Sbjct: 825 LLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASE 884

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWV 581
            G+LG GD    + P  V AL+   V  I  G++  A +   K V
Sbjct: 885 YGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEV 929


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/281 (39%), Positives = 153/281 (54%), Gaps = 21/281 (7%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELVACGEHHTCAVTLSGDMYTWGGS 312
           VFSWG    G+LG G  SD   P  +DAL+ + +   V CG +HT AV  +GD+YTWGG 
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
              +G LGHGNE     P+++   L G+ +  ++CG  HTAVVTS G L+T+GD   GV 
Sbjct: 61  M--YGKLGHGNESGHSTPRRVE-ALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVA 117

Query: 373 GHGD-RISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
           GHGD      TP+ ++ L G + V+ +ACG +HTA + +              + F WG+
Sbjct: 118 GHGDTEGHQYTPKLLERLNGKKVVQLSACG-FHTACLTD------------DHETFAWGE 164

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
           G  GRLG+G +     P  + +L+    CQV+CG   +  +T  G +YT G   +GQLG 
Sbjct: 165 GKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGH 224

Query: 491 PKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
                KL PT VE  L    V++I CG  H   LTS  E +
Sbjct: 225 ADKVNKLKPTLVE-ALDGVVVKQITCGWSHSVALTSEGEYH 264



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 139/247 (56%), Gaps = 16/247 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           + ++ CG  H A V   G++++WG  + G+LGHG +S  S P+ ++AL  +++  +ACG 
Sbjct: 35  ITHVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGS 94

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT  VT  G +YTWG  +   G+ GHG+ E   + PK L   L G  V  +S   +HTA
Sbjct: 95  RHTAVVTSKGCLYTWG--DKENGVAGHGDTEGHQYTPKLLE-RLNGKKVVQLSACGFHTA 151

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            +T   + F +G+G FG LG+G   +  +PR ++SL G    + ACG +H+A +      
Sbjct: 152 CLTDDHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITR---- 207

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                    GK++T+G G+ G+LGH DK  +L PT V AL      Q++CG S +VALT+
Sbjct: 208 --------DGKMYTFGGGEHGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTS 259

Query: 474 TGHVYTM 480
            G  + +
Sbjct: 260 EGEYHLV 266



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/235 (37%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+CG +HTA V S G L+T+G G +G LGHG+    STPR V++L GL  V  ACG 
Sbjct: 35  ITHVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGS 94

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA-RLVPTCVAALVEPNFCQ 460
            HTA V             S G L+TWGD + G  GHGD E  +  P  +  L      Q
Sbjct: 95  RHTAVVT------------SKGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQ 142

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
           +S     T  LT     +  G   +G+LG+         R+   L   +  ++ACG +H 
Sbjct: 143 LSACGFHTACLTDDHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHS 202

Query: 521 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           AV+T   ++YT+G G +G+LGH D  ++  P+LVEAL    VK I CG S + A+
Sbjct: 203 AVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVAL 257



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 5/148 (3%)

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC-QVSCGHSLTVALTTTGHVYTMGSP 483
           +F+WG G+ G+LG GD   +  PT V AL        V+CG   T A+ + G +YT G  
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 484 VYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
           +YG+LG    +G   P RVE  +  + V+ IACG  H AV+TS+  +YTWG   NG  GH
Sbjct: 61  MYGKLGHGNESGHSTPRRVEALVGLSIVD-IACGSRHTAVVTSKGCLYTWGDKENGVAGH 119

Query: 543 GDTDDRNF-PSLVEALKDKQVKSI-VCG 568
           GDT+   + P L+E L  K+V  +  CG
Sbjct: 120 GDTEGHQYTPKLLERLNGKKVVQLSACG 147


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 185/400 (46%), Gaps = 37/400 (9%)

Query: 276 PKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
           P L+++++++ ++ VA   G  H  A++  G +Y+WG  +   G LGHGN++S   PK +
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDD--GKLGHGNKVSYDRPKLI 60

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 393
              L G+ +  ++CG  H+A +TSAG L+T+G G +G LGHGD      P+ V++L+  +
Sbjct: 61  ED-LLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYK 119

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSG--KLFTWGDGDRGRLGHGDKEARLVPTCVA 451
            +  ACG               + + C +    +++WGDGD G+LG G  +   VP  + 
Sbjct: 120 VIDVACG------------SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKID 167

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE 511
           +L      +V CG   +VALT +G VYT G   Y +LG    +     R    L    + 
Sbjct: 168 SLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKII 227

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            IA G  H    + + EV+TWG    G+LG G T   + P LV AL+ K++  + CG++ 
Sbjct: 228 SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAH 287

Query: 572 TAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNC---GLVYCHTCSSKKSVKASMAP 628
           T A     W +            P  +   +   Y+     LV  H  +       +M P
Sbjct: 288 TLA-----WSTAKATQSRMPASTPMEYDLVKDLSYSVLRNRLVLLHHFAELLCPALAMFP 342

Query: 629 ----------NPNKPYRVCDNCFGKLTKATETSSSSHSTV 658
                      P   Y + +  F K+ +AT      H  V
Sbjct: 343 ITGHIGLSKLAPMLVYSIKEATFRKVIQATMVRDRQHGPV 382



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 148/302 (49%), Gaps = 19/302 (6%)

Query: 222 FVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
            +P  +ES   + ++ +A   GG+H   ++ +G V+SWGE   G+LGHG       PKLI
Sbjct: 1   MIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLI 60

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
           + L  + +  +ACG HH+ A+T +G +YTWG     +G LGHG+      PK +   L+ 
Sbjct: 61  EDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGR--YGRLGHGDSDDQLRPKVVEA-LQD 117

Query: 340 IHVSSVSCG--PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
             V  V+CG     T  VT    ++++GDG +G LG G       P ++DSL GL  V+ 
Sbjct: 118 YKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKV 177

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
            CG   + A+              SG ++TWG GD  RLGHG  +    P  VAAL    
Sbjct: 178 ECGSQFSVALTR------------SGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK 225

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD 517
              ++ G    VA +  G V+T G    GQLGD   +     R+   L    +  +ACG 
Sbjct: 226 IISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGS 285

Query: 518 YH 519
            H
Sbjct: 286 AH 287



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 29/289 (10%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G V+ WGE   DG LG          G K+    PK +E  + +++ +IACGG H+A 
Sbjct: 31  SEGHVYSWGE-GDDGKLG---------HGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAA 80

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGD 305
           +T  G +++WG+   GRLGHG   D   PK+++AL++  V  VAC  G+  T  VT   +
Sbjct: 81  ITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN 140

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +++WG  + ++G LG G      +P K++  L G+ V  V CG   +  +T +G ++T+G
Sbjct: 141 VWSWG--DGDYGKLGRGGSDGCKVPLKIDS-LAGLGVVKVECGSQFSVALTRSGAVYTWG 197

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GK 424
            G +  LGHG    V  PR+V +L+G + +  A G  H  A             CS  G+
Sbjct: 198 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA-------------CSDKGE 244

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
           +FTWGD D G+LG G   A   P  V AL      +V+CG + T+A +T
Sbjct: 245 VFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWST 293



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 36/251 (14%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLSSAVSSS---SQGSGHDDGDSL-----GDVFIWGECTGD 201
           G  GR GH  G S D  R  +  A+          G  D  +L      +V+ WG+  GD
Sbjct: 93  GRYGRLGH--GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGD--GD 148

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
               G + R GS  G K    VP  ++S   L V  + CG + +  +T+ G V++WG+  
Sbjct: 149 Y---GKLGRGGS-DGCK----VPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGD 200

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
             RLGHG D  V  P+ + AL+   +  +A G  H  A +  G+++TWG ++   G LG 
Sbjct: 201 YHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND--EGQLGD 258

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G   +L  P+ ++  L+G  ++ V+CG  HT   ++A                  R+  S
Sbjct: 259 GTTSALHRPRLVHA-LQGKKITRVACGSAHTLAWSTAK-------------ATQSRMPAS 304

Query: 382 TPREVDSLKGL 392
           TP E D +K L
Sbjct: 305 TPMEYDLVKDL 315


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 490 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 547

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 548 SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQK-LNQQTILQVSCGNWHCL 604

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 605 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG------------ 652

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 653 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 712

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 713 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 772

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 773 FGCGARGQLGTGHTCNVKCPSPVK 796



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 476 VAEPQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 531

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 532 I-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 588

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 589 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQTSPQ 636

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 637 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 696

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 697 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 755

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 756 GRQHTLAF 763



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 529 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 588

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 589 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQTSPQRVRS-LEGIP 645

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 646 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 705

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 706 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 753

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 754 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRC 813

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 814 KYHIVKQIFSGGDQTFVLCSKYE 836



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 610 GQFFTWGK-NSHGQLGLGKEFPSQTS--------PQRVRSLEGIPLAQVAAGGAHSFALS 660

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 661 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 720

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 721 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 777

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 778 RGQLGTGHTCNVKCPSPV 795


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 180/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 172

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 173 SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 229

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 230 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 277

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D+E R  P  V  L       +SCG   T  LT
Sbjct: 278 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 337

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 338 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 397

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K   VK I  G   T  +C
Sbjct: 398 FGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLC 457



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 101 VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 156

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 157 I-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 213

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 214 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 261

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 262 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ 321

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 322 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 380

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 381 GRQHTLAF 388



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 154 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 213

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 214 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 270

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 271 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGE 330

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 331 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 378

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 379 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 438

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 439 KYHIVKQIFSGGDQTFVLCSKYE 461



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 235 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 285

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 286 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 345

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 346 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 402

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 403 RGQLGTGHTCNVKCPSPV 420


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 186/382 (48%), Gaps = 39/382 (10%)

Query: 216 GVKMDSFVPKAVESAVVLD--VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
           G  +   +P+      + D  V+ +ACGG H+  + + GEV++ G    G+LGH  +S+ 
Sbjct: 15  GSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEG 72

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSL-WLPK 331
           S P+ I AL   ++  VACGE H+ A++  G +++WG GS+   GL    + +++  L K
Sbjct: 73  SKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK 132

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLK 390
           KLN       +  +SCG WH   + + GQ FT+G  ++G LG G    S ++P+ V SL 
Sbjct: 133 KLNQQT----ILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLD 188

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
           G+   + A G            G+ S +   SG +F WG    G+LG  D+  R  P  V
Sbjct: 189 GIPLAQVAAG------------GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHV 236

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFV 510
             L       +SCG   T  LT +G V+T G+   GQLG    N ++  R   +L  + V
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 511 EEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV--------------- 554
            +IACG +H +A + S   +Y +G G  G+LG G T +   PS V               
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKP 356

Query: 555 EALKDKQVKSIVCGTSFTAAIC 576
           +A K   VK I  G   T  +C
Sbjct: 357 DACKYHIVKHIFSGGDQTFVLC 378



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 162/327 (49%), Gaps = 23/327 (7%)

Query: 254 VFSWGEELGGR--LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+  +G  +   +  P++   + + NV+ VACG +H+  +   G++YT G 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           +    G LGH +E S   P+ + G L G H+  V+CG  H+  ++  GQ+F++G G+ G 
Sbjct: 61  NTK--GQLGHESEGS--KPEPI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115

Query: 372 LGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
           LG      +V+ PR +  L     ++ +CG WH  A+             + G+ FTWG 
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA------------ADGQFFTWGQ 163

Query: 431 GDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
              G+LG G +  ++  P  V +L      QV+ G + + AL+ +G V+  G    GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223

Query: 490 -DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
              + + + P  V+  L    V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D 
Sbjct: 224 LSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
             P  V  L   +V  I CG   T A 
Sbjct: 283 VNPRRVLELMGSEVSQIACGRHHTLAF 309


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 182/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A++ S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K + VK I  G   T  +C
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +++ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK--GQLGHEREGN--KPEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQTSPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A+
Sbjct: 302 GRQHTLAL 309



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 141/284 (49%), Gaps = 19/284 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQTSPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 503
           +CG   T+AL  ++G +Y  G    GQLG     N K P+ V+G
Sbjct: 300 ACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 122/252 (48%), Gaps = 26/252 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           G +F WG    DG LG              DS  VP+ ++      +  ++CG  H   +
Sbjct: 103 GQLFSWG-AGSDGQLG---------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL 152

Query: 249 TKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
              G+ F+WG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++LSG ++
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG +N   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G
Sbjct: 213 GWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           + G LGH        PR V  L G    + ACG  HT A+V            SSG ++ 
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP-----------SSGLIYA 318

Query: 428 WGDGDRGRLGHG 439
           +G G +G+LG G
Sbjct: 319 FGCGAKGQLGTG 330



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQTS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A+V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 KGQLGTGHTCNVKCPSPV 341


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 192/417 (46%), Gaps = 39/417 (9%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D FV K V        +++ CG RH   V   G V
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G+E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G      T P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIECQKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEA---LKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMC-----SGCRIPFNFKR 600
             V+      + Q    +    +    C+ +  SG DQS         C  P +F+R
Sbjct: 339 FTVKGNWFSYNGQCPQDIGSEDY---FCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G++
Sbjct: 119 QGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 133/275 (48%), Gaps = 23/275 (8%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N ++G LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASYGQLGLGGIDEEIVLEPRKSDFFVNK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLG-HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
             YGQLG      K   P  ++  L   F++ +A G  H  VLT    ++ WG+   G+L
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 198/385 (51%), Gaps = 37/385 (9%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFV--PKAVESA-VVLDVQNIACGGRHAALV 248
           +F WG+C+ +G LG          G     F+  P+ +E+     +V+ ++CG  H A +
Sbjct: 1   MFCWGKCS-EGQLG---------VGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFL 50

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            K G V++ G    G+LG   +   ++P+ + A++   +  V CG+ HT AV+  G ++ 
Sbjct: 51  CKDGTVYTCGSNEFGQLGQ--EKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFA 108

Query: 309 WGGSNCNFGLLGHGN---EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           WG ++  +G +G G+   E    +PK L G L  + V  ++CG  H+  +T +G LF +G
Sbjct: 109 WGDNS--YGQIGLGSKVKEKVQTIPKMLKG-LAKMSVVQIACGCNHSMALTISGHLFCWG 165

Query: 366 DGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           D + G LG G    S+S P  V SL G+  +  + G            G+ S +  SSG 
Sbjct: 166 DNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAG------------GAHSFALSSSGA 213

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           LF WG  + G+LG  D   R +PT + +L     C VSCG   T  LT+ G V+T G   
Sbjct: 214 LFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGT 273

Query: 485 YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHG 543
            GQLG    + +   R   +L  + V +IACG  H +A++ S   VYT+G+G +G+LG G
Sbjct: 274 SGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLG 333

Query: 544 DTDDRNFPSLVEA--LKDKQVKSIV 566
            T++ N P   +   L+   +KS++
Sbjct: 334 VTNNCNSPMTAKGPWLRSNNIKSML 358



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 167/330 (50%), Gaps = 26/330 (7%)

Query: 254 VFSWGEELGGRLGHGVDSD--VSHPKLIDALK-NINVELVACGEHHTCAVTLSGDMYTWG 310
           +F WG+   G+LG G      +S P+L++ L+ + NV  V+CG +HT  +   G +YT G
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            +   FG LG   E S   P+ ++  +E   ++ V+CG  HT  V+  G +F +GD ++G
Sbjct: 61  SNE--FGQLGQ--EKSHTNPESVHA-IETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYG 115

Query: 371 VLGHGDRIS---VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +G G ++     + P+ +  L  +  V+ ACG  H+ A+              SG LF 
Sbjct: 116 QIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALT------------ISGHLFC 163

Query: 428 WGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WGD   G+LG G   + +  P  V +L    F  +S G + + AL+++G ++  G   YG
Sbjct: 164 WGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYG 223

Query: 487 QLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           QLG      + LPT ++  L    V  ++CG+ H AVLTS   V+T+G G +G+LGH   
Sbjct: 224 QLGVHDTTDRPLPTLLKS-LRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSN 282

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                P  V  L    V  I CG + T A+
Sbjct: 283 HHEYTPRKVFELMGSVVTQIACGRAHTLAL 312


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 182/356 (51%), Gaps = 33/356 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V  +ACG  H+A+VT+ G ++ +G    G+LG G    ++ P  +  LK   V  VACG 
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGR 99

Query: 295 HHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           +HT   + SG ++++G   CN  G LGH ++ +  LPK++   +  + +  ++CG +H+ 
Sbjct: 100 NHTIVYSESGKLFSFG---CNEDGQLGHVDKENELLPKEIES-IPQMEIKQIACGTYHSI 155

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           +++  G ++ +G+   G LG G+ +  S P+++   K    V  +CG +HTA V      
Sbjct: 156 ILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKK--EVVSVSCGYYHTALVTR---- 209

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR--LVPTCVAALVEPN-FCQVSCGHSLTVA 470
                    G L+T+G+ + G+LG    +     VP  VA   + + +  VSCG   TVA
Sbjct: 210 --------DGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVA 261

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGKL-----PTRVEGKLTKNFVEEIACGDYHVAVLTS 525
           +T  GH Y  G    GQLG      KL     P +++ KL+      ++CG+ H AV+T 
Sbjct: 262 ITKQGHCYAWGDGSQGQLG---HGTKLLEVNEPKQIK-KLSGQKCISVSCGESHTAVVTE 317

Query: 526 RTEVYTWGKGANGRLGHG-DTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAICLHK 579
             +V+T+G G +G+LG G D+   +F P  +       V  + CG   T  + +HK
Sbjct: 318 SGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHK 373



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 151/298 (50%), Gaps = 21/298 (7%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           +KN  V  +ACG+ H+  VT SG +Y +G +  ++G LG G+  SL  P  +  PL+   
Sbjct: 35  IKNDGVVEMACGDEHSAVVTESGRLYVFGSN--DWGQLGLGHTKSLNKPSFVK-PLKPEK 91

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  V+CG  HT V + +G+LF+FG    G LGH D+ +   P+E++S+  +   + ACG 
Sbjct: 92  VRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGT 151

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
           +H+  + E             G ++ WG+ + G+LG G++    +P  +    E     V
Sbjct: 152 YHSIILSE------------DGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKE--VVSV 197

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDY 518
           SCG+  T  +T  G +YT G    G+LG      +N  +P  V      +    ++CG  
Sbjct: 198 SCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGAR 257

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H   +T +   Y WG G+ G+LGHG    + N P  ++ L  ++  S+ CG S TA +
Sbjct: 258 HTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVV 315



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 150/289 (51%), Gaps = 33/289 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F +G C  DG LG   H        K +  +PK +ES   ++++ IACG  H+ +++
Sbjct: 109 GKLFSFG-CNEDGQLG---HVD------KENELLPKEIESIPQMEIKQIACGTYHSIILS 158

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           + G+V+ WG    G+LG G + + S PK +   K   V  V+CG +HT  VT  G +YT+
Sbjct: 159 EDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKK--EVVSVSCGYYHTALVTRDGFLYTF 216

Query: 310 GGSNCNFGLLGHGNEM--SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           G +    G LG  +    +  +P+ +  P +     SVSCG  HT  +T  G  + +GDG
Sbjct: 217 GEN--ELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDG 274

Query: 368 TFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           + G LGHG + + V+ P+++  L G + +  +CG  HTA V E            SGK+F
Sbjct: 275 SQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTE------------SGKVF 322

Query: 427 TWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCG--HSLTVAL 471
           T+GDG  G+LG G+        P  ++     N   VSCG  H+L +A+
Sbjct: 323 TFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAV 371



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 26/222 (11%)

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           +   G +FTFG   F      D I+         +K    V  ACG  H+A V E     
Sbjct: 11  IPDLGAVFTFGKSKFA-----DNIANKF-----WIKNDGVVEMACGDEHSAVVTE----- 55

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                  SG+L+ +G  D G+LG G  ++   P+ V  L      +V+CG + T+  + +
Sbjct: 56  -------SGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSES 108

Query: 475 GHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           G +++ G    GQLG   K N  LP  +E  + +  +++IACG YH  +L+   +VY WG
Sbjct: 109 GKLFSFGCNEDGQLGHVDKENELLPKEIES-IPQMEIKQIACGTYHSIILSEDGDVYVWG 167

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               G+LG G+  + + P  ++    K+V S+ CG   TA +
Sbjct: 168 NNNEGQLGLGEEVENSLPKKLKF--KKEVVSVSCGYYHTALV 207


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 185/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT-SRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V EIACG  H +    S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 182/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A++ S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K + VK I  G   T  +C
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +++ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK--GQLGHEREGN--KPEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQTSPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A+
Sbjct: 302 GRQHTLAL 309



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 141/284 (49%), Gaps = 19/284 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQTSPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 503
           +CG   T+AL  ++G +Y  G    GQLG     N K P+ V+G
Sbjct: 300 ACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 123/252 (48%), Gaps = 26/252 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           G +F WG  + DG LG              DS  VP+ ++      +  ++CG  H   +
Sbjct: 103 GQLFSWGAGS-DGQLG---------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL 152

Query: 249 TKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
              G+ F+WG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++LSG ++
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG +N   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G
Sbjct: 213 GWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           + G LGH        PR V  L G    + ACG  HT A+V            SSG ++ 
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP-----------SSGLIYA 318

Query: 428 WGDGDRGRLGHG 439
           +G G +G+LG G
Sbjct: 319 FGCGAKGQLGTG 330



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQTS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A+V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 KGQLGTGHTCNVKCPSPV 341


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 184/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        Q++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------QDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  ++
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G E  + +P+ +   L  I +  ++CG +H+  ++   ++F++G    G LG
Sbjct: 114 GQLGL--PGTEEYIKVPRNIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170

Query: 374 HGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G  + S S P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGFELKSQSAPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+             ++     C+ K  SG DQS 
Sbjct: 339 FTVKGNWFPYSGKCSSNSNDEEYFCVKKIFSGGDQSF 375



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 147/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG  T DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT-DGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            G+   +K    VP+ ++S   + +  IACG  H+  ++K  EVFSWG+   G+LG G +
Sbjct: 119 PGTEEYIK----VPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               S P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 LKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRFV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 136/277 (49%), Gaps = 27/277 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVQDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    Q++CG+  ++AL+    V++ G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFV----EEIACGDYHVAVLTSRTEVYTWGKGANG 538
             +GQLG      +L ++   +L K+ +     ++A G  H  VLT    ++ WG+   G
Sbjct: 164 NKHGQLG---LGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 182/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A++ S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K + VK I  G   T  +C
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +++ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK--GQLGHEREGN--KPEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQTSPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A+
Sbjct: 302 GRQHTLAL 309



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 141/284 (49%), Gaps = 19/284 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQTSPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 503
           +CG   T+AL  ++G +Y  G    GQLG     N K P+ V+G
Sbjct: 300 ACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 122/252 (48%), Gaps = 26/252 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           G +F WG    DG LG              DS  VP+ ++      +  ++CG  H   +
Sbjct: 103 GQLFSWG-AGSDGQLG---------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL 152

Query: 249 TKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
              G+ F+WG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++LSG ++
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG +N   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G
Sbjct: 213 GWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           + G LGH        PR V  L G    + ACG  HT A+V            SSG ++ 
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP-----------SSGLIYA 318

Query: 428 WGDGDRGRLGHG 439
           +G G +G+LG G
Sbjct: 319 FGCGAKGQLGTG 330



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQTS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A+V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 KGQLGTGHTCNVKCPSPV 341


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 182/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A++ S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K + VK I  G   T  +C
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +++ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK--GQLGHEREGN--KPEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQTSPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A+
Sbjct: 302 GRQHTLAL 309



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 141/284 (49%), Gaps = 19/284 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQTSPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 503
           +CG   T+AL  ++G +Y  G    GQLG     N K P+ V+G
Sbjct: 300 ACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 123/252 (48%), Gaps = 26/252 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           G +F WG  + DG LG              DS  VP+ ++      +  ++CG  H   +
Sbjct: 103 GQLFSWGAGS-DGQLG---------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL 152

Query: 249 TKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
              G+ F+WG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++LSG ++
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG +N   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G
Sbjct: 213 GWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           + G LGH        PR V  L G    + ACG  HT A+V            SSG ++ 
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP-----------SSGLIYA 318

Query: 428 WGDGDRGRLGHG 439
           +G G +G+LG G
Sbjct: 319 FGCGAKGQLGTG 330



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQTS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A+V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 KGQLGTGHTCNVKCPSPV 341


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 176/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         + D FV K V        +++ CG RH   V   G V
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  VACGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G+E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V ++ACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 156/329 (47%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +V+CG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+ G  + I V  PR + SL  ++ V+ ACG +H+ A+              + ++F 
Sbjct: 115 QLGLQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  + CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 131/262 (50%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG      GS   ++    VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWG-LDSDGQLG----LQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVF WG+   G+LG G+D    + P+LI +L  I    VA G  H+  +TLSG ++ 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E   ++P  L   L    +  + CG  HTA +T  G +FTFG G 
Sbjct: 214 WGRNK--FGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    + ACG  HT+A V            SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 182/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A++ S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K + VK I  G   T  +C
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +++ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK--GQLGHEREGN--KPEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQTSPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A+
Sbjct: 302 GRQHTLAL 309



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 141/284 (49%), Gaps = 19/284 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQTSPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 503
           +CG   T+AL  ++G +Y  G    GQLG     N K P+ V+G
Sbjct: 300 ACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 122/252 (48%), Gaps = 26/252 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           G +F WG    DG LG              DS  VP+ ++      +  ++CG  H   +
Sbjct: 103 GQLFSWG-AGSDGQLG---------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL 152

Query: 249 TKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
              G+ F+WG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++LSG ++
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG +N   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G
Sbjct: 213 GWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           + G LGH        PR V  L G    + ACG  HT A+V            SSG ++ 
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP-----------SSGLIYA 318

Query: 428 WGDGDRGRLGHG 439
           +G G +G+LG G
Sbjct: 319 FGCGAKGQLGTG 330



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQTS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A+V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 KGQLGTGHTCNVKCPSPV 341


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 176/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         + D FV K V        +++ CG RH   V   G V
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  VACGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G+E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V ++ACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 156/329 (47%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +V+CG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+ G  + I V  PR + SL  ++ V+ ACG +H+ A+              + ++F 
Sbjct: 115 QLGLQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  + CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 131/262 (50%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG      GS   ++    VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWG-LDSDGQLG----LQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVF WG+   G+LG G+D    + P+LI +L  I    VA G  H+  +TLSG ++ 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E   ++P  L   L    +  + CG  HTA +T  G +FTFG G 
Sbjct: 214 WGRNK--FGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    + ACG  HT+A V            SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 177/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F  K V        +++ CG RH   V   G V
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y+WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEEYIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V ++ACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 158/329 (48%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +VSCG  HT  +   GQ++++G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+LG  + I V  PR + SL  ++ V+ ACG +H+ A+              + ++F 
Sbjct: 115 QLGLLGSEEYIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  + CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEEYIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQVACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 176/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         + D FV K V        +++ CG RH   V   G V
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  VACGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G+E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V ++ACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 156/329 (47%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +V+CG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+ G  + I V  PR + SL  ++ V+ ACG +H+ A+              + ++F 
Sbjct: 115 QLGLQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  + CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 131/262 (50%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG      GS   ++    VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWG-LDSDGQLG----LQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVF WG+   G+LG G+D    + P+LI +L  I    VA G  H+  +TLSG ++ 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E   ++P  L   L    +  + CG  HTA +T  G +FTFG G 
Sbjct: 214 WGRNK--FGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    + ACG  HT+A V            SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 176/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         + D FV K V        +++ CG RH   V   G V
Sbjct: 13  WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKV--------RDVGCGLRHTVFVLDDGTV 64

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  VACGE HT A+   G +Y WG  S+
Sbjct: 65  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 122

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G+E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 123 GQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 179

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 180 LGIDCQKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 227

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 228 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 287

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V ++ACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 288 TSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 347

Query: 552 SLVE 555
             V+
Sbjct: 348 FTVK 351



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 156/329 (47%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 10  MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 68

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +V+CG  HT  +   GQ++ +G   DG
Sbjct: 69  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 123

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+ G  + I V  PR + SL  ++ V+ ACG +H+ A+              + ++F 
Sbjct: 124 QLGLQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFC 169

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 170 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 229

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 230 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 289

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  + CG   T+A 
Sbjct: 290 HEINPRKVFELMGSIVTQVACGRQHTSAF 318



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 131/262 (50%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG      GS   ++    VP+ ++S   + +  +ACG  H+  ++
Sbjct: 112 GQVYAWG-LDSDGQLG----LQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALS 162

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVF WG+   G+LG G+D    + P+LI +L  I    VA G  H+  +TLSG ++ 
Sbjct: 163 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 222

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E   ++P  L   L    +  + CG  HTA +T  G +FTFG G 
Sbjct: 223 WGRNK--FGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 279

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    + ACG  HT+A V            SSG+++++
Sbjct: 280 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 328

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 329 GLGGNGQLGTGSTSNRKSPFTV 350


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 182/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A++ S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K + VK I  G   T  +C
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +++ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK--GQLGHEREGN--KPEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQTSPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A+
Sbjct: 302 GRQHTLAL 309



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 141/284 (49%), Gaps = 19/284 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQTSPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 503
           +CG   T+AL  ++G +Y  G    GQLG     N K P+ V+G
Sbjct: 300 ACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 123/252 (48%), Gaps = 26/252 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           G +F WG  + DG LG              DS  VP+ ++      +  ++CG  H   +
Sbjct: 103 GQLFSWGAGS-DGQLG---------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL 152

Query: 249 TKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
              G+ F+WG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++LSG ++
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG +N   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G
Sbjct: 213 GWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           + G LGH        PR V  L G    + ACG  HT A+V            SSG ++ 
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP-----------SSGLIYA 318

Query: 428 WGDGDRGRLGHG 439
           +G G +G+LG G
Sbjct: 319 FGCGAKGQLGTG 330



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQTS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A+V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 KGQLGTGHTCNVKCPSPV 341


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 VGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+L+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-RVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 184/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        Q++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------QDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  ++
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G E  + +P+ +   L  I +  ++CG +H+  ++   ++F++G    G LG
Sbjct: 114 GQLGL--PGTEEYIKVPRNIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170

Query: 374 HGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G  + S S P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGFELKSQSAPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+             ++     C+ K  SG DQS 
Sbjct: 339 FTVKGNWFPYSGKCSSNSNDEEYFCVKKIFSGGDQSF 375



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 147/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG  T DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT-DGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            G+   +K    VP+ ++S   + +  IACG  H+  ++K  EVFSWG+   G+LG G +
Sbjct: 119 PGTEEYIK----VPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               S P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 LKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRFV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 136/277 (49%), Gaps = 27/277 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVQDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    Q++CG+  ++AL+    V++ G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFV----EEIACGDYHVAVLTSRTEVYTWGKGANG 538
             +GQLG      +L ++   +L K+ +     ++A G  H  VLT    ++ WG+   G
Sbjct: 164 NKHGQLG---LGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/324 (34%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D+E R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 154/326 (47%), Gaps = 33/326 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARSDRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYT 531
             + V++I  G     VL S+ E Y+
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYENYS 385



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 177/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F  K V        +++ CG RH   V   G V
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y+WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLLG--SEEYIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V ++ACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 158/329 (48%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +VSCG  HT  +   GQ++++G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+LG  + I V  PR + SL  ++ V+ ACG +H+ A+              + ++F 
Sbjct: 115 QLGLLGSEEYIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  + CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEEYIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQVACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 176/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         + D FV K V        +++ CG RH   V   G V
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  VACGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G+E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V ++ACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 156/329 (47%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +V+CG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+ G  + I V  PR + SL  ++ V+ ACG +H+ A+              + ++F 
Sbjct: 115 QLGLQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  + CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 131/262 (50%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG      GS   ++    VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWG-LDSDGQLG----LQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVF WG+   G+LG G+D    + P+LI +L  I    VA G  H+  +TLSG ++ 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E   ++P  L   L    +  + CG  HTA +T  G +FTFG G 
Sbjct: 214 WGRNK--FGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    + ACG  HT+A V            SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 180/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D+E R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K   VK I  G   T  +C
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLC 378



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 177/368 (48%), Gaps = 28/368 (7%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           +  WG  +   +  GGI         + D FV K V        +++ CG RH   V   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKV--------RDVGCGLRHTVFVLDD 52

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG- 310
           G V++ G    G+LGH  +     P+ + AL   N+  VACGE HT A+   G +Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGL 110

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            S+   GL   G+E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G
Sbjct: 111 DSDGQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 371 VLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG G D    ++P+ + SL G+  ++ A G  H+  +              SG +F WG
Sbjct: 168 QLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT------------LSGAIFGWG 215

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
               G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDR 548
               + ++  R   +L  + V ++ACG  H  A + S   +Y++G G NG+LG G T +R
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 549 NFPSLVEA 556
             P  V+ 
Sbjct: 336 KSPFTVKG 343



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 157/329 (47%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +V+CG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+ G  + I V  PR + SL  ++ V+ ACG +H+ A+ +            + ++F 
Sbjct: 115 QLGLQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  + CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 131/262 (50%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG      GS   ++    VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWG-LDSDGQLG----LQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVF WG+   G+LG G+D    + P+LI +L  I    VA G  H+  +TLSG ++ 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E   ++P  L   L    +  + CG  HTA +T  G +FTFG G 
Sbjct: 214 WGRNK--FGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    + ACG  HT+A V            SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 180/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADEHIVHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEESVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D+E R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K   VK I  G   T  +C
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLC 378



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 21/306 (6%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG  H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVSTPREVDSLKG 391
           + G L   H+  V+CG  H+  ++  GQLF++G G+ G LG      SV+ PR +  L  
Sbjct: 78  I-GALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQ 136

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCV 450
              ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P  V
Sbjct: 137 QTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQRV 184

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNF 509
            +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+  L    
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LLRAQK 243

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 570 SFTAAI 575
             T A 
Sbjct: 304 QHTLAF 309



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 148/312 (47%), Gaps = 33/312 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPKLIDALKNINVELVACG 293
           + ++ACG  H+  ++ +G++FSWG    G+LG    +  V+ P+LI  L    +  V+CG
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCG 145

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIHVSSVSCGPWHT 352
             H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI ++ V+ G  H+
Sbjct: 146 NWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHS 202

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG  HTA + +   
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTK--- 259

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                    SG +FT+G G  G+LGH      + P  V  L+     Q++CG   T+A  
Sbjct: 260 ---------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 473 -TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KLTKNFVEEIACG 516
            ++G +Y  G    GQLG     N K P+ V+G              +   + V++I  G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSG 370

Query: 517 DYHVAVLTSRTE 528
                VL S+ E
Sbjct: 371 GDQTFVLCSKYE 382



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 24/251 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F WG  + DG LG            +    VP+ ++      +  ++CG  H   + 
Sbjct: 103 GQLFSWGAGS-DGQLG--------LMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALA 153

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
             G+ F+WG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +N   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G+
Sbjct: 214 WGMNNA--GQLGLSDEEDRESPCHVK-LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G LGH        PR V  L G    + ACG  HT A V            SSG ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 429 GDGDRGRLGHG 439
           G G RG+LG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 178/361 (49%), Gaps = 37/361 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + S P+ I AL + ++  VACGE
Sbjct: 95  VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGH--EKEGSKPEQIGALADQHIIHVACGE 152

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPWHT 352
            H+ A++  G +++WG GS+   GL    + +++  L KKLN  +    +  VSCG WH 
Sbjct: 153 SHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEM----ILQVSCGNWHC 208

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             + + GQ F +G  + G LG G    S ++P+ V SL G+   + A G           
Sbjct: 209 LALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAG----------- 257

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
            G+ S +   SG +F WG    G+LG  D++ R  P  V  L       +SCG   T  L
Sbjct: 258 -GAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVL 316

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVY 530
           T TG V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y
Sbjct: 317 TKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIY 376

Query: 531 TWGKGANGRLGHGDTDDRNFPSLV---------------EALKDKQVKSIVCGTSFTAAI 575
            +G G  G+LG G T +   PS V               +A K   VK I  G   T  +
Sbjct: 377 AFGCGIKGQLGSGHTCNLKCPSPVKGHWAAHNEPVSRRADACKHYVVKHIFSGGDQTFVL 436

Query: 576 C 576
           C
Sbjct: 437 C 437



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 151/310 (48%), Gaps = 21/310 (6%)

Query: 269 VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLW 328
           V   +  P+    +   +V+ VACG +H+  +   G++YT G +    G LGH  E S  
Sbjct: 77  VQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTK--GQLGHEKEGS-- 132

Query: 329 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVSTPREVD 387
            P+++ G L   H+  V+CG  H+  ++  G+LF++G G+ G LG      SV+ PR + 
Sbjct: 133 KPEQI-GALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIK 191

Query: 388 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLV 446
            L     ++ +CG WH  A+             + G+ F WG    G+LG G +  ++  
Sbjct: 192 KLNQEMILQVSCGNWHCLALA------------ADGQFFAWGQNSHGQLGLGKEFPSQAS 239

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKL 505
           P  V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   
Sbjct: 240 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLR 299

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
           T+  V  I+CG  H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I
Sbjct: 300 TQKVV-YISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQI 358

Query: 566 VCGTSFTAAI 575
            CG   T A 
Sbjct: 359 ACGRQHTLAF 368



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 140/284 (49%), Gaps = 19/284 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ QG +FSWG    G+LG     D V+ P+LI  L
Sbjct: 134 PEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKL 193

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  + WG +  + G LG G E  S   P+++   L+GI 
Sbjct: 194 NQEMILQVSCGNWHCLALAADGQFFAWGQN--SHGQLGLGKEFPSQASPQRVKS-LDGIP 250

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G  T G LG  D     +P  V  L+  + V  +CG 
Sbjct: 251 LAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGS 310

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            +G +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 311 DHTAVLTK------------TGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQI 358

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 503
           +CG   T+A   ++G +Y  G  + GQLG     N K P+ V+G
Sbjct: 359 ACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKG 402



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 129/276 (46%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           M  WG    +FG  G  + +  + L  + +G +    V  V+CG  H+  +   G+++T 
Sbjct: 60  MLCWG--YWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTC 117

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G  T G LGH      S P ++ +L     +  ACG  H+ A+ +             G+
Sbjct: 118 GVNTKGQLGHEKE--GSKPEQIGALADQHIIHVACGESHSLALSD------------QGR 163

Query: 425 LFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           LF+WG G  G+LG    E  + VP  +  L +    QVSCG+   +AL   G  +  G  
Sbjct: 164 LFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQN 223

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            +GQLG  K   + P++   +  K+     + ++A G  H   L+    V+ WGK  +G+
Sbjct: 224 SHGQLGLGK---EFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQ 280

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D  DR  P  V+ L+ ++V  I CG+  TA +
Sbjct: 281 LGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVL 316



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V+S   + +  +A GG H+  ++
Sbjct: 215 GQFFAWGQ-NSHGQLGLGKEFPSQAS--------PQRVKSLDGIPLAQVAAGGAHSFALS 265

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG+   G+LG   + D   P  +  L+   V  ++CG  HT  +T +G ++T+
Sbjct: 266 LSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTF 325

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  VS ++CG  HT A V S+G ++ FG G 
Sbjct: 326 GAGSC--GQLGHDSFNDEVNPRRVL-ELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGI 382

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   ++  P  V
Sbjct: 383 KGQLGSGHTCNLKCPSPV 400



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 5/155 (3%)

Query: 424 KLFTWGDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           K+  WG    G  G       ++  P     + E +  +V+CG + ++ L   G VYT G
Sbjct: 59  KMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCG 118

Query: 482 SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
               GQLG  K   K P ++ G L    +  +ACG+ H   L+ +  +++WG G++G+LG
Sbjct: 119 VNTKGQLGHEKEGSK-PEQI-GALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLG 176

Query: 542 HGDTDDR-NFPSLVEALKDKQVKSIVCGTSFTAAI 575
              T+D    P L++ L  + +  + CG     A+
Sbjct: 177 LTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLAL 211



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 497 LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
           L  R  G + +  V+E+ACG  H   L    EVYT G    G+LGH     +  P  + A
Sbjct: 82  LEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGSK--PEQIGA 139

Query: 557 LKDKQVKSIVCGTSFTAAIC----LHKWVSGVD 585
           L D+ +  + CG S + A+     L  W +G D
Sbjct: 140 LADQHIIHVACGESHSLALSDQGRLFSWGAGSD 172


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 VGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+L+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-RVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 186/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 VGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+L+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-RVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 181/368 (49%), Gaps = 28/368 (7%)

Query: 190 GDVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           GD+F WG  T  G LG GGI              VP  V+     ++Q IACG  +  ++
Sbjct: 31  GDMFCWGN-TRHGELGLGGIEDE--------IILVPCQVDFKKASEIQQIACGENYTVVI 81

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           T  G+++S G    G+LGH  +      +LI  L     + VACG +HT AV   G +++
Sbjct: 82  THDGKIYSCGNNDYGQLGH--ERGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFS 139

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG SN   G LG  ++  +    ++   L    +  V+CG  H   +T+ G+L+++G  +
Sbjct: 140 WG-SNSE-GQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNS 197

Query: 369 FGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            G LG G  I S   P+ +++L G+     ACG +H+ A+              SG +F 
Sbjct: 198 EGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAI------------SKSGAIFG 245

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG    G+LG  D + R +P  +  L     C  +CG   +V LT  G V+T G+ +YGQ
Sbjct: 246 WGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQ 305

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG    N ++  R   +L  + V +I+CG  H +A++ S+  VY WG G  G+LG+  T 
Sbjct: 306 LGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTR 365

Query: 547 DRNFPSLV 554
               P +V
Sbjct: 366 SIPTPQVV 373



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 160/336 (47%), Gaps = 29/336 (8%)

Query: 248 VTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           + K+G++F WG    G LG G   D  +  P  +D  K   ++ +ACGE++T  +T  G 
Sbjct: 27  LLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGK 86

Query: 306 MYTWGGSNCNFGLLGHG---NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           +Y+ G  N ++G LGH      + L L       L+      V+CG +HT  V   GQLF
Sbjct: 87  IYSCG--NNDYGQLGHERGRKRLQLILG------LDAFVFKKVACGAYHTIAVNEWGQLF 138

Query: 363 TFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           ++G  + G LG   +     +PR V +L     V+ ACG+ H  A+             +
Sbjct: 139 SWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALT------------N 186

Query: 422 SGKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
           +G+L++WG    G+LG G D  + + P  +  L       ++CG   ++A++ +G ++  
Sbjct: 187 NGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGW 246

Query: 481 GSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           G   +GQLG +   N  LP +++  L    +   ACG+     LT    V+T G G  G+
Sbjct: 247 GKNTFGQLGLNDTQNRNLPHQLQ-TLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQ 305

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LGHG  ++   P  V  L    V  I CG   T A+
Sbjct: 306 LGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLAL 341


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/345 (33%), Positives = 175/345 (50%), Gaps = 27/345 (7%)

Query: 243  RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL-KNINVELVACGEHHTCAVT 301
            R+   +  +  +++WG  + GRLGHG  +  S P+ I +   N  +  VACG  H+ A +
Sbjct: 1170 RYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARS 1229

Query: 302  LSGDMYTWG-GSNCNFGLLGHGNEMSL---WLPKK-LNGPLEGIHVSSVSCGPWHTAVVT 356
              G +Y WG G     G L + + + +   + P+  LN  L+   + S++CG WH   +T
Sbjct: 1230 FDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLN--LKRYFILSIACGRWHNMTLT 1287

Query: 357  SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            S  Q+ ++G G FG LG    +S  TP+ V +L G    +  CG WH+AA++E       
Sbjct: 1288 SERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILE------- 1340

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL-VEPNFCQVSCGHSLTVALTTTG 475
                 SGK+  WG    G+LGHGD ++   P     L +E        G + T+ +    
Sbjct: 1341 -----SGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVAN 1395

Query: 476  HVYTMGSPVYGQLG--DPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             V+ MGS + GQLG  DP   GK +P  +E    KN   ++A GD H   L+   EV++W
Sbjct: 1396 KVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNIC-QVAAGDQHSLALSVFGEVWSW 1454

Query: 533  GKGANGRLGHGDTDDRNFPS-LVEALK-DKQVKSIVCGTSFTAAI 575
            G    G+LGH    D+  P+ L+E  K    VKSI CG +F+AA+
Sbjct: 1455 GGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAM 1499



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 181/398 (45%), Gaps = 39/398 (9%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            ++ WG C  +G LG G H +G     ++ SF            +  +ACG  H+   +  
Sbjct: 1181 IYTWG-CGVNGRLGHGFH-TGYSTPQEITSFPSNT-------KIVEVACGCEHSLARSFD 1231

Query: 252  GEVFSWGEELGGRLGHGVDSD------VSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
            G V++WG    G+LG   + D        +P+ +  LK   +  +ACG  H   +T    
Sbjct: 1232 GGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQ 1291

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            + +WG     FG LG  + +S   P+ +   L+G     + CG WH+A +  +G++  +G
Sbjct: 1292 VLSWGAG--EFGQLGLDHNLSKGTPQMVKA-LDGRAPCKILCGGWHSAAILESGKILLWG 1348

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGK 424
               +G LGHGD  S S PR    L+    VR A  G  HT  V+             + K
Sbjct: 1349 KNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVM------------VANK 1396

Query: 425  LFTWGDGDRGRLGHGD--KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
            +F  G    G+LG  D  +  + VP  +  L   N CQV+ G   ++AL+  G V++ G 
Sbjct: 1397 VFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGG 1456

Query: 483  PVYGQLGDPKANGKL---PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
              +GQLG      KL   P     K+  + V+ IACG    A ++++ EV+TWG G +G 
Sbjct: 1457 SPFGQLGHETITDKLAPTPLLERHKIPPD-VKSIACGYTFSAAMSAKGEVFTWGNGESGE 1515

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            LGH        PSL++     +V  I CG    A I  
Sbjct: 1516 LGHAPKVLTYAPSLIKDF--SEVVQIACGFKHMAGIVF 1551



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 154/312 (49%), Gaps = 29/312 (9%)

Query: 252 GEVFSWGEELGGRLGHGVD-----SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
           G ++++G+ + GRLGHGV+       V HPK I+ L  ++V  +ACG+  T A+T +G +
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           YTWG S      LG G  +++ +P+ L   L    V  +S G  H A  T   + F +G 
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQ-LVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGS 633

Query: 367 GTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            TFG LG     S +  P E+ SL+       ACG WHT      ++ +++ S  S GK 
Sbjct: 634 NTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHT------LISTNTGSVMSCGK- 686

Query: 426 FTWGDGDRGRLGHGDKEA-----RLVP---TCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
                G  G+LGHGD E+     + +P     V    +    +VS G   + A+T  G +
Sbjct: 687 -----GWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRL 741

Query: 478 YTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           +T G     QLG +   N   P  VE    K  V +++ GD H+  L      Y+WG G+
Sbjct: 742 FTWGKGDEYQLGHESSKNEAYPREVE-FFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGS 800

Query: 537 NGRLGHGDTDDR 548
            G+LGHG+  +R
Sbjct: 801 AGQLGHGEMCER 812



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 156/311 (50%), Gaps = 37/311 (11%)

Query: 236 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
           +NI   G H         VF WG+   G+LG+  +     P ++ A +N+ V++ A G+ 
Sbjct: 83  ENIELQGSH---------VFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQ 133

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLP----------KKLNGPLEGI-HVS 343
           HT  ++  G + +  GSN  +G LG G+ M S   P           KL   ++ + ++ 
Sbjct: 134 HTLFLSADGVVLSC-GSNV-YGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIV 191

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            ++ G +H+  +   G++F++G G++G LG G   +  +PR V SL+  + V  ACG  H
Sbjct: 192 GIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHH 251

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           TAA+  V            G ++TWG G RG+LGH   +    P   A+L +    ++ C
Sbjct: 252 TAAITTV------------GDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRC 299

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAV 522
           G   T+ +  +G +Y+MG+  +GQLG   A  + +PT V G   +  ++  A G   +A 
Sbjct: 300 GDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIA- 358

Query: 523 LTSRTEVYTWG 533
           LT+  +V+ +G
Sbjct: 359 LTNTGKVFAFG 369



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 150/305 (49%), Gaps = 17/305 (5%)

Query: 190 GDVFIWGECTG-DGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           GD +I+    G  G LG G+  + S   VK     PK +E+   + V  IACG    A +
Sbjct: 513 GDGYIYTYGKGVFGRLGHGVEYTRSEESVKH----PKRIETLAKMSVVFIACGKDSTAAL 568

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDM 306
           T  G+V++WG+   G+LG G    ++   P+L+  L +  V  ++ G +H    T     
Sbjct: 569 TDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKF 628

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           + WG +   FG LG  + +S ++P       L   ++ S++CG WHT + T+ G + + G
Sbjct: 629 FVWGSN--TFGQLGIPH-ISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCG 685

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GK 424
            G  G LGHGD  S++   +  +L   + +    G    + +V+V  G  SS+  ++ G+
Sbjct: 686 KGWHGQLGHGDYESLTALSK--TLPYFKKIVEGFG---DSFIVKVSAGKESSAAITNKGR 740

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           LFTWG GD  +LGH   +    P  V    +     VS G S  +AL  +G  Y+ G+  
Sbjct: 741 LFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGS 800

Query: 485 YGQLG 489
            GQLG
Sbjct: 801 AGQLG 805



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 159/401 (39%), Gaps = 76/401 (18%)

Query: 234  DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI-------- 285
            DV++IACG   +A ++ +GEVF+WG    G LGH        P LI     +        
Sbjct: 1485 DVKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFK 1544

Query: 286  ------------NVELVACGEHHTCAVTLSGDM--------------------------- 306
                         +EL         + T SG +                           
Sbjct: 1545 HMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSAS 1604

Query: 307  --------YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
                    + WG   C  G LG     +   P  +   L    +  +S     +A VT +
Sbjct: 1605 NQKRHGCVFVWGEDTC--GQLGIRGLQAARSPSLMQSLL-ATSIVHISANSDMSAFVTDS 1661

Query: 359  GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            G L+  G    G LG G      TP E+ SL  ++ ++ ACG +H  A+ E         
Sbjct: 1662 GSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTE--------- 1712

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
                 +++ WGDG  G  G  +    L P  +++L   +   V  G   + AL+  G ++
Sbjct: 1713 ---EKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLF 1769

Query: 479  TMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT--EVYTWGK 534
              G    GQLG     A    PT++        V +++ G  H AVL   T   ++T G 
Sbjct: 1770 MWGKNSNGQLGLGTTSAAEDSPTKISN--LDGVVMDVSLGANHSAVLMQVTSPNLFTCGL 1827

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             ANG+LG GD  DR+  + V+AL D+Q+ S  CG + TAA+
Sbjct: 1828 NANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAV 1868



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 30/274 (10%)

Query: 306 MYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           ++ WG G N   G LG+ +E    +P  +      + V   + G  HT  +++ G + + 
Sbjct: 92  VFMWGDGEN---GKLGNQSEEIQHVPYIVPA-FRNVLVKVCALGKQHTLFLSADGVVLSC 147

Query: 365 GDGTFGVLGHGDR-ISVSTP-------REVDSLKGL-----RTVRAACGVWHTAAVVEVM 411
           G   +G LG GD  +S STP       + +D L+ +       V  A G +H+ A+ +  
Sbjct: 148 GSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALND-- 205

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                     +GK+F+WG G  G+LG G       P  VA+L       ++CG   T A+
Sbjct: 206 ----------TGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAI 255

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
           TT G V+T G  + GQLG      +   R+   L K   ++I CGD H  V+    ++Y+
Sbjct: 256 TTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYS 315

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
            G   +G+LG GD  DR  P+LV    +++V  I
Sbjct: 316 MGANTHGQLGLGDATDRIIPTLVTGFANEKVIDI 349



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 168/353 (47%), Gaps = 38/353 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMD-SFVPKAVESAVVLDVQNIACGGRHAALV 248
            G V+ WG   GD    G +    ++  VK++ +F P+ V +     + +IACG  H   +
Sbjct: 1232 GGVYAWG--AGDR---GQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTL 1286

Query: 249  TKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDM 306
            T + +V SWG    G+L  G+D ++S   P+++ AL       + CG  H+ A+  SG +
Sbjct: 1287 TSERQVLSWGAGEFGQL--GLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKI 1344

Query: 307  YTWGGSNCNFGLLGHGNEMSLWLPK-KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
              WG +   +G LGHG+  S   P+      LEG  V +   G  HT VV  A ++F  G
Sbjct: 1345 LLWGKN--VYGQLGHGDTKSCSAPRVNQYLRLEG-KVRTAGLGANHTLVVMVANKVFAMG 1401

Query: 366  DGTFGVLGHGD--RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
                G LG  D  R   + P  ++ L G    + A G  H+ A+               G
Sbjct: 1402 SNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLAL------------SVFG 1449

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            ++++WG    G+LGH     +L PT +     + P+   ++CG++ + A++  G V+T G
Sbjct: 1450 EVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWG 1509

Query: 482  SPVYGQLGD-PKANGKLPTRVEGKLTKNFVE--EIACGDYHVAVLTSRTEVYT 531
            +   G+LG  PK     P+     L K+F E  +IACG  H+A +  +  + T
Sbjct: 1510 NGESGELGHAPKVLTYAPS-----LIKDFSEVVQIACGFKHMAGIVFKPRMKT 1557



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 164/371 (44%), Gaps = 41/371 (11%)

Query: 190  GDVFIWGE--CTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            G VF+WGE  C   GI G    RS            P  ++S +   + +I+     +A 
Sbjct: 1610 GCVFVWGEDTCGQLGIRGLQAARS------------PSLMQSLLATSIVHISANSDMSAF 1657

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT  G ++  G    GRLG G  +    P  I +L  + +  VACG +H  A+T    +Y
Sbjct: 1658 VTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVY 1717

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             WG  +  +G  G  N   +  P++L+  L    +  V  G +H+A ++  G LF +G  
Sbjct: 1718 AWG--DGKWGNAGVSNTNDVLEPQELS-SLAACSIIGVHAGGFHSAALSQYGDLFMWGKN 1774

Query: 368  TFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            + G LG G   +   +P ++ +L G+  +  + G  H+A +++V          +S  LF
Sbjct: 1775 SNGQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSAVLMQV----------TSPNLF 1823

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            T G    G+LG GD   R   T V AL +      SCG + T A++  G + T G+   G
Sbjct: 1824 TCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNG 1883

Query: 487  QLG-------DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            QLG       D +   +LP      + K     + CG     V++ + E+Y  G  +   
Sbjct: 1884 QLGLKAGLSKDIENPVQLPAICNDPMVK-----VVCGQEVTIVVSEKGELYMAGYESTIG 1938

Query: 540  LGHGDTDDRNF 550
            LG   +  R F
Sbjct: 1939 LGGNSSRRREF 1949



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 146/312 (46%), Gaps = 32/312 (10%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P  + S   + +  +ACG  H   +T++  V++WG+   G  G    +DV  P+ + +L 
Sbjct: 1686 PVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLA 1745

Query: 284  NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLW-LPKKLNGPLEGIHV 342
              ++  V  G  H+ A++  GD++ W G N N G LG G   +    P K++  L+G+ V
Sbjct: 1746 ACSIIGVHAGGFHSAALSQYGDLFMW-GKNSN-GQLGLGTTSAAEDSPTKISN-LDGV-V 1801

Query: 343  SSVSCGPWHTAVV--TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
              VS G  H+AV+   ++  LFT G    G LG GD +  ST   VD+L   + V A+CG
Sbjct: 1802 MDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCG 1861

Query: 401  VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV--PTCVAALVEPNF 458
              HTAAV +             G L TWG+G  G+LG     ++ +  P  + A+     
Sbjct: 1862 AAHTAAVSQY------------GDLITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPM 1909

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE------E 512
             +V CG  +T+ ++  G +Y  G      LG     G    R E  ++   VE      +
Sbjct: 1910 VKVVCGQEVTIVVSEKGELYMAGYESTIGLG-----GNSSRRREFDVSFREVEGLIQPTQ 1964

Query: 513  IACGDYHVAVLT 524
            IA G  HV  L 
Sbjct: 1965 IAVGSVHVLALV 1976



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 177/445 (39%), Gaps = 77/445 (17%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F WG  +  G LG      GS A  +   FV     S VV    +IACG  H A +T
Sbjct: 207 GKIFSWGSGSW-GKLG-----IGSDANAESPRFVASLQNSKVV----HIACGAHHTAAIT 256

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G+V++WG+ L G+LGH    +   P+L  +L+    + + CG+ HT  +  SG +Y+ 
Sbjct: 257 TVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSM 316

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G +    G LG G+     +P  + G      V  +      +  +T+ G++F FG+ T 
Sbjct: 317 GAN--THGQLGLGDATDRIIPTLVTG-FANEKVIDIDAKGCRSIALTNTGKVFAFGNETE 373

Query: 370 GVLGHGDRISVSTP-------------------------------------REVDSLKGL 392
             L    R     P                                     R ++S   +
Sbjct: 374 PHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPFSSEEESSRMLESFHAI 433

Query: 393 R-TVRAACGVWHTAAV-------VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR 444
           +  VR  CG  H A +        + M+  + S++ SS       D  R  L     E  
Sbjct: 434 KGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSS-------DISRASLEKFPSEKI 486

Query: 445 LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD------PKANGKLP 498
           L            F  V    S   +    G++YT G  V+G+LG        + + K P
Sbjct: 487 LPALGTNTEYLDEFATVQVRDS--PSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHP 544

Query: 499 TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF--PSLVEA 556
            R+E  L K  V  IACG    A LT   +VYTWGK A G+LG G         P LV+ 
Sbjct: 545 KRIE-TLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQD 603

Query: 557 LKDKQVKSIVCGTSFTA-AICLHKW 580
           L    V  I  G +  A +  +HK+
Sbjct: 604 LSSHVVCQISLGRNHAACSTDMHKF 628



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 131/295 (44%), Gaps = 35/295 (11%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           ++  IA G  H+  +   G++FSWG    G+LG G D++   P+ + +L+N  V  +ACG
Sbjct: 189 NIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACG 248

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HHT A+T  GD++TWG      G LGH +    + P +LN  L       + CG  HT 
Sbjct: 249 AHHTAAITTVGDVWTWG--KGLRGQLGHKSVKEEFSP-RLNASLRKCGAQKIRCGDDHTL 305

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           V+  +GQL++ G  T G LG GD      P  V      + +                 G
Sbjct: 306 VILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAK------------G 353

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
             S +  ++GK+F +G+     L         +P  VA L + +         L +A+  
Sbjct: 354 CRSIALTNTGKVFAFGNETEPHLNR-------IPRFVAGLPKSD---------LIIAVAR 397

Query: 474 TGHVYTMGSPVYGQL--GDPKANGKLPTR-VEGKLTKNFVEEIACGDYHVAVLTS 525
           T H +       GQL    P ++ +  +R +E       V  + CG  H+AV+ S
Sbjct: 398 TAH-FDFAISDTGQLFRWRPFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICS 451



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 33/290 (11%)

Query: 304 GDMYTWGGSNCNFGLLGHG-----NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
           GD Y +      FG LGHG     +E S+  PK++   L  + V  ++CG   TA +T  
Sbjct: 513 GDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIE-TLAKMSVVFIACGKDSTAALTDT 571

Query: 359 GQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           G+++T+G    G  G LG G  +++  P+ V  L      + + G  H A   ++     
Sbjct: 572 GKVYTWGKSAQGKLG-LGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMH---- 626

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQVSCGHSLTVALTTT 474
                   K F WG    G+LG     + +  P  + +L E N   ++CG   T+  T T
Sbjct: 627 --------KFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNT 678

Query: 475 GHVYTMGSPVYGQLGD---------PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
           G V + G   +GQLG           K        VEG    +F+ +++ G    A +T+
Sbjct: 679 GSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEG-FGDSFIVKVSAGKESSAAITN 737

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +  ++TWGKG   +LGH  + +  +P  VE     +V  +  G S   A+
Sbjct: 738 KGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLAL 787



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 185/447 (41%), Gaps = 101/447 (22%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           ++GDV+ WG+    G+ G   H+S     VK + F P+   S      Q I CG  H  +
Sbjct: 257 TVGDVWTWGK----GLRGQLGHKS-----VK-EEFSPRLNASLRKCGAQKIRCGDDHTLV 306

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN---INVELVACGEHHTCAVTLSG 304
           + + G+++S G    G+LG G  +D   P L+    N   I+++   C    + A+T +G
Sbjct: 307 ILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGC---RSIALTNTG 363

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            ++ +G          H N     +P+ + G  +   + +V+        ++  GQLF +
Sbjct: 364 KVFAFGNETEP-----HLNR----IPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRW 414

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLR-TVRAACGVWHTAAV-------VEVMVGSSS 416
              +             + R ++S   ++  VR  CG  H A +        + M+  + 
Sbjct: 415 RPFS---------SEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNK 465

Query: 417 SSNCSS-------------------------------------------GKLFTWGDGDR 433
           S++ SS                                           G ++T+G G  
Sbjct: 466 STSFSSDISRASLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVF 525

Query: 434 GRLGHG-----DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           GRLGHG      +E+   P  +  L + +   ++CG   T ALT TG VYT G    G+L
Sbjct: 526 GRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKL 585

Query: 489 GDPKANGK-----LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG-- 541
           G    +GK     +P  V+  L+ + V +I+ G  H A  T   + + WG    G+LG  
Sbjct: 586 G--LGSGKPLAIVVPQLVQ-DLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIP 642

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCG 568
           H  +   + P  + +L++  ++SI CG
Sbjct: 643 HISSYMPD-PYEITSLREANIRSIACG 668



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 163/404 (40%), Gaps = 41/404 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G + +WG+    G LG G  +S S   V     +   V +A          G  H  +V 
Sbjct: 1342 GKILLWGKNV-YGQLGHGDTKSCSAPRVNQYLRLEGKVRTA--------GLGANHTLVVM 1392

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
               +VF+ G  + G+LG    S      P  I+ L   N+  VA G+ H+ A+++ G+++
Sbjct: 1393 VANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVW 1452

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-----VSSVSCGPWHTAVVTSAGQLF 362
            +WGGS   FG LGH        P     PL   H     V S++CG   +A +++ G++F
Sbjct: 1453 SWGGSP--FGQLGHETITDKLAPT----PLLERHKIPPDVKSIACGYTFSAAMSAKGEVF 1506

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV----EVMVGSSSSS 418
            T+G+G  G LGH  ++    P  +        V+ ACG  H A +V       +  + SS
Sbjct: 1507 TWGNGESGELGHAPKVLTYAPSLIKDFS--EVVQIACGFKHMAGIVFKPRMKTIELTGSS 1564

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
            N           GD      G   A  V     +    +    +   S +      G V+
Sbjct: 1565 NI----------GDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQ-KRHGCVF 1613

Query: 479  TMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
              G    GQLG       + P+ ++  L  + V   A  D   A +T    +Y  G   +
Sbjct: 1614 VWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMS-AFVTDSGSLYVSGGSEH 1672

Query: 538  GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWV 581
            GRLG G       P  + +L   ++  + CGT    A+   K V
Sbjct: 1673 GRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRV 1716



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 27/230 (11%)

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            +F +GDG  G LG+        P  V + + +     A G  HT  +            
Sbjct: 91  HVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFL------------ 138

Query: 420 CSSGKLFTWGDGDRGRLGHGDKE-ARLVPTC----------VAALVEP--NFCQVSCGHS 466
            + G + + G    G+LG GD   +R  P            + A+++   N   ++ G+ 
Sbjct: 139 SADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYY 198

Query: 467 LTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            ++AL  TG +++ GS  +G+LG    AN + P R    L  + V  IACG +H A +T+
Sbjct: 199 HSLALNDTGKIFSWGSGSWGKLGIGSDANAESP-RFVASLQNSKVVHIACGAHHTAAITT 257

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             +V+TWGKG  G+LGH    +   P L  +L+    + I CG   T  I
Sbjct: 258 VGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVI 307



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 2/101 (1%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           +  K VE      +  ++ G   +A +T +G +F+WG+    +LGH    + ++P+ ++ 
Sbjct: 709 YFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEF 768

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
              I V  V+ G+ H  A+  SG  Y+WG  N + G LGHG
Sbjct: 769 FAKIRVVDVSIGDSHMLALDYSGLPYSWG--NGSAGQLGHG 807


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 178/367 (48%), Gaps = 28/367 (7%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           +  WG  +   +  GGI         K D F  K V        +++ CG RH   V   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKV--------RDVGCGLRHTVFVLDD 52

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG- 310
           G V++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y+WG 
Sbjct: 53  GTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL 110

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            S+   GLLG  +E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G
Sbjct: 111 DSDGQLGLLG--SEEYIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 371 VLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG
Sbjct: 168 QLGLGIDCKKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWG 215

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
               G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDR 548
               + ++  R   +L  + V ++ACG  H  A + S   +Y++G G NG+LG G T +R
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 549 NFPSLVE 555
             P  V+
Sbjct: 336 KSPFTVK 342



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 159/329 (48%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +VSCG  HT  +   GQ++++G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+LG  + I V  PR + SL  ++ V+ ACG +H+ A+ +            + ++F 
Sbjct: 115 QLGLLGSEEYIRV--PRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V  + CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D
Sbjct: 119 LGSEEYIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQVACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/324 (34%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D+E R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVK 342



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG-DKEARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEYPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEYPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEYPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 KGQLGTGHTCNVKCPSPV 341


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 180/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H  A++  G +++WG GS+   GL+    E ++ +P+ +   L    +  VSCG WH+ 
Sbjct: 94  SHNLALSDRGQLFSWGAGSDGQLGLMT--TEDAVAVPRVIQ-KLNQQTILQVSCGNWHSL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D+E R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K   VK I  G   T  +C
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLC 378



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H   ++  GQLF++G   DG  G++   D ++V  PR +  L
Sbjct: 78  I-GALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAV--PRVIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH+ A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHSLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H   ++ +G++FSWG    G+LG     D V+ P++I  L
Sbjct: 75  PEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H+ A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHSLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 111/218 (50%), Gaps = 15/218 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDA 281
           VP+ ++      +  ++CG  H+  +   G+ F+WG+   G+LG G +    + P+ + +
Sbjct: 127 VPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 186

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+ I +  VA G  H+ A++LSG ++ WG +N   G LG  +E     P  +   L    
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA--GQLGLSDEEDRESPCHVK-LLRTQK 243

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HTAV+T +G +FTFG G+ G LGH        PR V  L G    + ACG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
            HT A V            SSG ++ +G G RG+LG G
Sbjct: 304 QHTLAFVP-----------SSGLIYAFGCGARGQLGTG 330



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 174/351 (49%), Gaps = 17/351 (4%)

Query: 218 KMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS-HP 276
           K+   VP+ ++     ++   ACG  H  L+T  G+++S G    G+LGH V+S  +  P
Sbjct: 332 KVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRP 391

Query: 277 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
           +L+ AL+N  +    CG  H+ A+T  G +Y+WG +    G LG   + +  +  +L   
Sbjct: 392 QLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAV--GQLGQETDTTRQIIPRLIRS 449

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTV 395
           +    V  ++ G +H   +T++G+L+ +G   +G LG G     VSTP  V SL G+   
Sbjct: 450 IAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIA 509

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
             ACG  H+ AV              SG +F WG    G+LG  D  +R  PT +  L  
Sbjct: 510 FIACGGNHSFAV------------SKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRS 557

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 515
                VSCG   +V LT  G V+T G+  +GQLG    N ++  R+  +L  + + +IAC
Sbjct: 558 LGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIAC 617

Query: 516 GDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
           G  H +A + SR ++Y +G    G+LG G   + N P +V      Q+ + 
Sbjct: 618 GRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVRGPWQSQILTF 668



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 161/358 (44%), Gaps = 41/358 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P      + +D +N+ CG         QGEVF     L   +       V  P+ +D + 
Sbjct: 303 PVGTNGHMTVDGENVECG-------PIQGEVFP---SLAKVM-------VMVPRKMDWMH 345

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK---LNGPLEGI 340
              +   ACG  HT  +T  G MY+ G  N + G LGH  E    LP K   L   LE  
Sbjct: 346 AKEIARAACGASHTLLLTNDGKMYSCG--NNDHGQLGHDVES---LPNKRPQLLTALENY 400

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH-GDRISVSTPREVDSLKGLRTVRAAC 399
            ++   CG  H+  +T+ GQ++++G    G LG   D      PR + S+   + V+ A 
Sbjct: 401 IITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAA 460

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNF 458
           G +H  A+             +SG+L+ WG    G+LG G    ++  PT V +L     
Sbjct: 461 GHYHCLALT------------NSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPI 508

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGD 517
             ++CG + + A++ +G ++  G   +GQLG    N +  PT++   L    V  ++CGD
Sbjct: 509 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLR-TLRSLGVRYVSCGD 567

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                LT+   V+T G G  G+LGHG  ++   P +V  L   ++  I CG   T A 
Sbjct: 568 DFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAF 625


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 190/399 (47%), Gaps = 34/399 (8%)

Query: 183  HDDGDSLG---DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIA 239
            H D   +G   D ++WG         GG H     AG      V   + ++     Q I 
Sbjct: 981  HPDDWQMGGSCDAYLWG---------GGRHGQLCEAGRS----VLTPLHTSSFSSAQQII 1027

Query: 240  CGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELVAC--GEHH 296
            CG     ++   G V + GE   GRLG G   D+    ++ AL+   V +LV     + H
Sbjct: 1028 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGH 1087

Query: 297  TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            + A+T SG++++WG  + ++G LGHGN      P+++   L+G  V  ++CG  H+AVVT
Sbjct: 1088 SLALTESGEVFSWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVIQIACGFKHSAVVT 1144

Query: 357  SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
              G+L TFG+G +G LG G   +  TP  V +L+       ACG+ HT     V V +  
Sbjct: 1145 VDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNHT-----VCVSADG 1199

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
            S+       + +GDGD G+LG G+  A+  P  + AL      +V+CG   +VALT  G 
Sbjct: 1200 STT------WAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVALTRDGF 1253

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            V T G        + +  G    +    L  +F+EE+  G  H   LTS   V+ WG  A
Sbjct: 1254 VLTWGQDRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNA 1313

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQ-VKSIVCGTSFTAA 574
            +G+LG G T     P L+  L   + +K I  G + +AA
Sbjct: 1314 DGQLGLGHTGTVREPQLLGGLGSSEPIKQISAGRTHSAA 1352



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 132/281 (46%), Gaps = 30/281 (10%)

Query: 303  SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS------CGPWHTAVVT 356
            S D Y WGG         HG      L +     L  +H SS S      CG   T V+ 
Sbjct: 990  SCDAYLWGGGR-------HGQ-----LCEAGRSVLTPLHTSSFSSAQQIICGQNCTFVIQ 1037

Query: 357  SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            + G +   G+G++G LG G+          D L  L  V A  G   T  V  V     S
Sbjct: 1038 ANGTVLACGEGSYGRLGQGNS---------DDLHSLTIVSALQGFVVTQLVTSVGSDGHS 1088

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
             +   SG++F+WGDGD G+LGHG+ + +  P  + AL      Q++CG   +  +T  G 
Sbjct: 1089 LALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGK 1148

Query: 477  VYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGK 534
            + T G+  YG+LG     N K P RV+  L    +  +ACG  H V V    +  + +G 
Sbjct: 1149 LLTFGNGDYGRLGLGTVCNRKTPERVKA-LENYHIGHVACGLNHTVCVSADGSTTWAFGD 1207

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G  G+LG G+T  ++ P  +EAL   +VK + CGT F+ A+
Sbjct: 1208 GDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVAL 1248


>gi|115447969|ref|NP_001047764.1| Os02g0684900 [Oryza sativa Japonica Group]
 gi|113537295|dbj|BAF09678.1| Os02g0684900, partial [Oryza sativa Japonica Group]
          Length = 431

 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 207/444 (46%), Gaps = 41/444 (9%)

Query: 578  HKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 637
            H+ +S  DQS+CS C++ F F RK+HNCYNCG ++C++CS+ K  +A++AP+ +K YRVC
Sbjct: 1    HRPLSSKDQSVCSNCQLTFGFTRKKHNCYNCGSMFCNSCSNNKVSRAALAPDRSKRYRVC 60

Query: 638  DNCFGKLTKATETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVE 697
            D CF ++ K  E     H  +  +  + +     +E   ++  +    F  +   ++K+ 
Sbjct: 61   DACFSQMQKVEE-----HRKLDPQQKIQKDEVCPIE-IRSYTPKLARIFKEANAIMEKMA 114

Query: 698  SGSSKRNKKQEFN-----RTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGS- 751
            S  S   + Q        RT    L    SQ   +   + S P   +  K    ++ GS 
Sbjct: 115  SAQSPHQRSQNLAVPDHVRTLRWGLVECPSQFRCV---RESIPYCSTLNK---QTVSGSI 168

Query: 752  -RIMSRATSPTSRRSSPPRATTPTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRK 810
             R+M+   +P    S    A      L  + +  I++++ K+  E+V  L  Q  + + K
Sbjct: 169  VRVMNETMAPKPASSLLKSANDSKAELDLMEN--ILLEEVKQLQEQVTTLAKQCRQRSLK 226

Query: 811  SQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNS 870
             QL +       R+++E   +A +E AKC+AAKD+IK L  Q   +++ L  G   +++ 
Sbjct: 227  VQLYK-------RKVEETWLIAKDEAAKCKAAKDIIKVLIDQHDFLSKNLLAGEKLDNSR 279

Query: 871  FHSSPTPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFG-DNRSPSQTEASHCE 929
               S   +     A +  P     F        ++    N      +   PS    ++  
Sbjct: 280  IMPSHIASAKSLKAELPDPPDKNVFTSEFQQSKSNRDHHNSRQVDRECTQPSIASMANYS 339

Query: 930  ATTKNKNRT------------MKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFS 977
             T +N  RT                P   +  +EQ E GVY T+V  PGG K +KR+RFS
Sbjct: 340  VTHQNCRRTSNGSTRCTEGTDATTAPTDSNGVIEQIERGVYATVVTSPGGKKCIKRIRFS 399

Query: 978  RKKFSEKQAEQWWAANRARVYQQY 1001
            RK F E QA++WW AN + ++ +Y
Sbjct: 400  RKHFGEDQAQKWWEANESMIFGKY 423


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 170/341 (49%), Gaps = 30/341 (8%)

Query: 211 SGSYAGVKMDSFVPKAV-ESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV 269
           SGS      D +  K   E  ++L    +  G  H A++++ G++F+WGE   GRLGHG 
Sbjct: 110 SGSNNNNDDDKYFTKLYPEERIIL----VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGD 165

Query: 270 DSDVSHPKLIDALKNINVELVACGEHHTCAV--TLSGDMYTWGGSNCNFGLLGHGN--EM 325
           +  +S PK + AL NI ++ V CG   T A+  T    +YTWG  N  FG LG G+  + 
Sbjct: 166 EESISTPKQVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWG--NNEFGQLGRGDCGDD 223

Query: 326 SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPRE 385
              LP+ +  P     + ++  G    AV+ S+G LFT+G G  G LGHGD  +   P  
Sbjct: 224 FTCLPESVAVP-GAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTL 282

Query: 386 VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA-R 444
           V SL G   V  A G  H+ A+ +            +G+LF+WG G+ G+LGHG  ++ +
Sbjct: 283 VSSLYGHVVVAVALGGGHSLALTK------------AGELFSWGRGENGQLGHGSYQSQQ 330

Query: 445 LVPTCVAALVE-PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG---KLPTR 500
           L P  +   V+ P    +S G   +VA    G VY  G   YG LG   ++     +P R
Sbjct: 331 LAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQR 390

Query: 501 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
           +       F + I+CG  H   LTS   +Y+WG G  GRLG
Sbjct: 391 ILMPRGIRF-KTISCGFQHTVALTSDNTIYSWGCGLGGRLG 430



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 143/313 (45%), Gaps = 62/313 (19%)

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG---- 400
           V+ G  H A+++ +G+LFT+G+G +G LGHGD  S+STP++V +L  +      CG    
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 401 --VWHTAA-------------------------------------VVEVMVGSSSSSNC- 420
             + HTA                                      +V +  G+S ++   
Sbjct: 194 IALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVID 253

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
           SSG LFTWG GD GRLGHGD E R  PT V++L       V+ G   ++ALT  G +++ 
Sbjct: 254 SSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSW 313

Query: 481 GSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
           G    GQLG    ++    P +++  +    +  I+ G YH         VY WG    G
Sbjct: 314 GRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYG 373

Query: 539 RLGHGDTDD--RNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSGV-------- 584
            LG GD+DD   N P  +   +  + K+I CG   T A+     ++ W  G+        
Sbjct: 374 ILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFN 433

Query: 585 DQSMCS--GCRIP 595
           +++ C+   C IP
Sbjct: 434 EKNQCAPIACNIP 446



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 25/195 (12%)

Query: 187 DSLGDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
           DS G +F WG   GD G LG G            + + P  V S     V  +A GG H+
Sbjct: 253 DSSGALFTWGR--GDHGRLGHGDTE---------NRYQPTLVSSLYGHVVVAVALGGGHS 301

Query: 246 ALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPK----LIDALKNINVELVACGEHHTCAV 300
             +TK GE+FSWG    G+LGHG   S    PK     +D  K I    ++ G +H+ A 
Sbjct: 302 LALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIG---ISAGGYHSVAQ 358

Query: 301 TLSGDMYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
              G +Y WG S  ++G+LG G  ++ ++ +P+++  P  GI   ++SCG  HT  +TS 
Sbjct: 359 LDDGSVYAWGMS--DYGILGTGDSDDGAINIPQRILMP-RGIRFKTISCGFQHTVALTSD 415

Query: 359 GQLFTFGDGTFGVLG 373
             ++++G G  G LG
Sbjct: 416 NTIYSWGCGLGGRLG 430



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 10/86 (11%)

Query: 505 LTKNFVEE----IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDK 560
            TK + EE    +  G  H+A+++   +++TWG+G  GRLGHGD +  + P  V AL + 
Sbjct: 122 FTKLYPEERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANI 181

Query: 561 QVKSIVCG------TSFTAAICLHKW 580
            +K + CG       S TA   L+ W
Sbjct: 182 PMKYVFCGGRSTIALSHTAGSGLYTW 207


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 171/324 (52%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H   + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGH--EREGNQPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDQGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 162/332 (48%), Gaps = 33/332 (9%)

Query: 254 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+ G G  +   V+ P+    + + +V+ VACG  H   +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGL 60

Query: 312 SNCNFGLLGH---GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG--- 365
           +    G LGH   GN+     P+++ G L   H+  V+CG  H+  ++  GQLF++G   
Sbjct: 61  NTK--GQLGHEREGNQ-----PEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGS 112

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           DG  G++   D  SV+ PR +  L     ++ +CG WH  A+             + G+ 
Sbjct: 113 DGQLGLMTTED--SVAVPRLIQKLNQQTILQVSCGNWHCLALA------------TDGQF 158

Query: 426 FTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           FTWG    G+LG G +  ++  P  V +L      QV+ G + + AL+ +G V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 485 YGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            GQLG   + + + P  V+   T+  V  I+CG+ H AVLT    V+T+G G+ G+LGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             +D   P  V  L   +V  I CG   T A 
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAF 309



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQTS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 181/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                    SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K + VK I  G   T  +C
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +++ VACG +H+  +   G++YT G ++   G LGH  E +   P++
Sbjct: 22  VAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSK--GQLGHEREGN--KPEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQTSPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGHG  +D   P  V  L   +V  I C
Sbjct: 243 KVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 141/284 (49%), Gaps = 19/284 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQTSPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGHG     + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 503
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 180/360 (50%), Gaps = 35/360 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDQGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA---------------LKDKQVKSIVCGTSFTAAIC 576
           +G GA G+LG G T +   PS V+                 K   VK I  G   T  +C
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLC 378



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ QG++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 185/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG  H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 VGSEECIR----VPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+L+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 175/364 (48%), Gaps = 28/364 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         + D FV K V        +++ CG RH   V   G V
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  VACGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G+E  + +P+ +   L  I +  V+CG +H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V + ACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVE 555
             V+
Sbjct: 339 FTVK 342



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 155/329 (47%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +V+CG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+ G  + I V  PR + SL  ++ V+ ACG +H+ A+              + ++F 
Sbjct: 115 QLGLQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFC 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G ++  G   +G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P  V  L    V    CG   T+A 
Sbjct: 281 HEINPRKVFELMGSIVTQAACGRQHTSAF 309



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 132/262 (50%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG      GS   ++    VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWG-LDSDGQLG----LQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVF WG+   G+LG G+D    + P+LI +L  I    VA G  H+  +TLSG ++ 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E   ++P  L   L    +  + CG  HTA +T  G +FTFG G 
Sbjct: 214 WGRNK--FGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    +AACG  HT+A V            SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVP-----------SSGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 183/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        Q++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------QDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  ++
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G E  + +P+ +   L  I +  ++CG +H+  ++   ++F++G    G LG
Sbjct: 114 GQLGL--PGTEEYIRVPRNIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170

Query: 374 HGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G  +   S+P+ + SL G+   + A G            G+ S     SG +F WG   
Sbjct: 171 LGFELKRQSSPQLIKSLLGIPFTQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +  +      C+ +  SG DQS 
Sbjct: 339 FTVKGNWFPYSGKCLPESDGEEFFCVKRIFSGGDQSF 375



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG  T DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT-DGQLG----- 117

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
                G +    VP+ ++S   + +  IACG  H+  ++K  EVFSWG+   G+LG G +
Sbjct: 118 ---LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               S P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 LKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRFV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVQDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    Q++CG+  ++AL+    V++ G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFV----EEIACGDYHVAVLTSRTEVYTWGKGANG 538
             +GQLG      +L  +   +L K+ +     ++A G  H  VLT    ++ WG+   G
Sbjct: 164 NKHGQLG---LGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 185/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG  H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 VGSEECIR----VPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+L+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + +  V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 15/218 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDA 281
           VP+ ++      +  ++CG  H   +   G+ F+WG+   G+LG G +    + P+ + +
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 186

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+ I +  VA G  H+ A++LSG ++ WG +N   G LG  +E     P  +   L    
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQK 243

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HTAV+T +G +FTFG G+ G LGH        PR V  L G    + ACG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
            HT A V            SSG ++ +G G RG+LG G
Sbjct: 304 QHTLAFVP-----------SSGLIYAFGCGARGQLGTG 330



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 181/382 (47%), Gaps = 42/382 (10%)

Query: 236  QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS--DVSHPKLIDALKNINVELVACG 293
            ++++CG  HAA++T  GE+F+WG    G+LGHG+ +    S P  +++LK   + +++ G
Sbjct: 1197 KSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLG 1256

Query: 294  EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
              HT  +  S  +Y+WG  N  +G LGHG      LPK++     G  +SS++ G WHT 
Sbjct: 1257 GEHTVVIDRSFHIYSWG--NGKYGQLGHGVSTPHNLPKRIE-EFAGQKISSIATGYWHTL 1313

Query: 354  VVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSL------KGLRTVRAACGVWHTAA 406
            V+ S G LF FG    G LG  D +  +  P  V++       +  R     CG  H+ +
Sbjct: 1314 VLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCG--HSHS 1371

Query: 407  VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
            V+            S G ++++G   +G+LGHG  E+   P  +  L   N  +++CG  
Sbjct: 1372 VLR----------TSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPY 1421

Query: 467  LTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             TV  T    VY  G   +  LG     N  +P  VE  + K  VE + CG YH A LT 
Sbjct: 1422 HTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKR-VERVVCGLYHTATLTQ 1480

Query: 526  RT-------EVYTWGKGANGRLGHG-----DTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
                      VY  G   +G+LG G      + D+ +P+++ ++    V  +  G  F A
Sbjct: 1481 PMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNA 1540

Query: 574  AI----CLHKWVSGVDQSMCSG 591
             I     L+ W +G    + +G
Sbjct: 1541 LITSNGALYMWGAGTHGQIGNG 1562



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 179/401 (44%), Gaps = 44/401 (10%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G++F WG  T  G LG G+      A  K  S  P  VES     +  ++ GG H  ++ 
Sbjct: 1213 GELFTWGNNTS-GQLGHGL------AAGKHQS-TPMRVESLKQTPIMMMSLGGEHTVVID 1264

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +   ++SWG    G+LGHGV +  + PK I+      +  +A G  HT  +   GD++ +
Sbjct: 1265 RSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAF 1324

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-------VSSVSCGPWHTAVVTSAGQLF 362
            G +    G LG  N++   LP         IH       V+ + CG  H+ + TS G ++
Sbjct: 1325 GSN--EHGQLGL-NDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVY 1381

Query: 363  TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
            +FG    G LGHG   S   P+ +  LKG    R  CG +HT    ++            
Sbjct: 1382 SFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDL------------ 1429

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT-------TTG 475
              ++ WG G+   LG G  +  LVP  V   V     +V CG   T  LT       T G
Sbjct: 1430 DSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGG 1489

Query: 476  HVYTMGSPVYGQL---GDPKA---NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
            +VY  GS  +G+L   GDP++   +   P  +    + N V ++A G    A++TS   +
Sbjct: 1490 NVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVV-DLASGAEFNALITSNGAL 1548

Query: 530  YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
            Y WG G +G++G+G   D   P+ V    +K     +   S
Sbjct: 1549 YMWGAGTHGQIGNGKNQDTWIPTRVSLSSEKNQNQFIVDES 1589



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 142/301 (47%), Gaps = 40/301 (13%)

Query: 341  HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAA 398
            H  SVSCG  H AV+T  G+LFT+G+ T G LGHG       STP  V+SLK    +  +
Sbjct: 1195 HAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMS 1254

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
             G  HT  +              S  +++WG+G  G+LGHG      +P  +        
Sbjct: 1255 LGGEHTVVIDR------------SFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKI 1302

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVE-------GKLTKNF 509
              ++ G+  T+ L + G ++  GS  +GQLG  D K +  +PTRV        G+ T+  
Sbjct: 1303 SSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTR-- 1360

Query: 510  VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
            V  I CG  H  + TS  +VY++G  A G+LGHG T+   +P L++ LK K +K I CG 
Sbjct: 1361 VTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGP 1420

Query: 570  SFTAAIC----LHKWVSGVDQSMCSGC---------RIPFNFKRKRHNCYNCGLVYCHTC 616
              T        ++ W  G  + MC G          ++   F  KR     CGL +  T 
Sbjct: 1421 YHTVVTTDLDSVYCW--GQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATL 1478

Query: 617  S 617
            +
Sbjct: 1479 T 1479



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 120/288 (41%), Gaps = 34/288 (11%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            V  I CG  H+ L T  G+V+S+G    G+LGHG      +PKLI  LK  N++ + CG 
Sbjct: 1361 VTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGP 1420

Query: 295  HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            +HT   T    +Y WG G +   G   + NE    L  KL        V  V CG +HTA
Sbjct: 1421 YHTVVTTDLDSVYCWGQGEHMCLGTGSNKNE----LVPKLVELFVNKRVERVVCGLYHTA 1476

Query: 354  VVT-------SAGQLFTFGDGTFGVLGHG-----DRISVSTPREVDSLKGLRTVRAACGV 401
             +T       + G ++  G    G LG G       +  + P  + S+     V  A G 
Sbjct: 1477 TLTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGA 1536

Query: 402  WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
               A +             S+G L+ WG G  G++G+G  +   +PT V+   E N  Q 
Sbjct: 1537 EFNALI------------TSNGALYMWGAGTHGQIGNGKNQDTWIPTRVSLSSEKNQNQF 1584

Query: 462  SCGHSLTVALTTTGHVYTMGSPVYGQLG-----DPKANGKLPTRVEGK 504
                S +    ++  + T  +  Y Q G        ANG  P  V  K
Sbjct: 1585 IVDESGSTITLSSSMLLTEKNNRYTQEGLEETLRKNANGYRPFVVINK 1632



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 6/104 (5%)

Query: 504  KLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFPSLVEALKDKQ 561
            +  +   + ++CG  H AV+T   E++TWG   +G+LGHG      ++ P  VE+LK   
Sbjct: 1190 RFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTP 1249

Query: 562  VKSIVCGTSFTAAI----CLHKWVSGVDQSMCSGCRIPFNFKRK 601
            +  +  G   T  I     ++ W +G    +  G   P N  ++
Sbjct: 1250 IMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKR 1293


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 15/218 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDA 281
           VP+ ++      +  ++CG  H   +   G+ F+WG+   G+LG G +    + P+ + +
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 186

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+ I +  VA G  H+ A++LSG ++ WG +N   G LG  +E     P  +   L    
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQK 243

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HTAV+T +G +FTFG G+ G LGH        PR V  L G    + ACG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
            HT A V            SSG ++ +G G RG+LG G
Sbjct: 304 QHTLAFVP-----------SSGLIYAFGCGARGQLGTG 330



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 15/218 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDA 281
           VP+ ++      +  ++CG  H   +   G+ F+WG+   G+LG G +    + P+ + +
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 186

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+ I +  VA G  H+ A++LSG ++ WG +N   G LG  +E     P  +   L    
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQK 243

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HTAV+T +G +FTFG G+ G LGH        PR V  L G    + ACG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
            HT A V            SSG ++ +G G RG+LG G
Sbjct: 304 QHTLAFVP-----------SSGLIYAFGCGARGQLGTG 330



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 15/218 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDA 281
           VP+ ++      +  ++CG  H   +   G+ F+WG+   G+LG G +    + P+ + +
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 186

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+ I +  VA G  H+ A++LSG ++ WG +N   G LG  +E     P  +   L    
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQK 243

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HTAV+T +G +FTFG G+ G LGH        PR V  L G    + ACG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
            HT A V            SSG ++ +G G RG+LG G
Sbjct: 304 QHTLAFVP-----------SSGLIYAFGCGARGQLGTG 330



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 15/218 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDA 281
           VP+ ++      +  ++CG  H   +   G+ F+WG+   G+LG G +    + P+ + +
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 186

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+ I +  VA G  H+ A++LSG ++ WG +N   G LG  +E     P  +   L    
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQK 243

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HTAV+T +G +FTFG G+ G LGH        PR V  L G    + ACG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
            HT A V            SSG ++ +G G RG+LG G
Sbjct: 304 QHTLAFVP-----------SSGLIYAFGCGARGQLGTG 330



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 185/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL+G  +E  + +P+ +   L  I +  V+CG  H+  ++ A ++F +G   +G LG
Sbjct: 114 GQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G D    ++P+ + SL G+  ++ A G            G+ S     SG +F WG   
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLG----L 118

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
            GS   ++    VP+ ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G D
Sbjct: 119 VGSEECIR----VPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               + P+L+ +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    QV+CG+  ++AL+    V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQ 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             YGQLG   D K     P  ++  L   F++ +A G  H  VLT    ++ WG+   G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 154/326 (47%), Gaps = 33/326 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYT 531
             + V++I  G     VL S+ E Y+
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYENYS 385



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 122/252 (48%), Gaps = 26/252 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           G +F WG  + DG LG              DS  VP+ ++      +  ++CG  H   +
Sbjct: 103 GQLFSWGAGS-DGQLG---------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL 152

Query: 249 TKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
              G+ F+WG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++LSG ++
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG +N   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G
Sbjct: 213 GWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           + G LGH        PR V  L G    + ACG  HT A V            SSG ++ 
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYA 318

Query: 428 WGDGDRGRLGHG 439
           +G G RG+LG G
Sbjct: 319 FGCGARGQLGTG 330



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 40  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 97

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 98  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 154

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 155 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 202

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 203 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 262

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 263 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 322

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 323 FGCGARGQLGTGHTCNVKCPSPVK 346



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 26  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 81

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 82  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 138

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 139 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 186

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 187 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 246

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 247 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 305

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 306 GRQHTLAF 313



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 154/326 (47%), Gaps = 33/326 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 79  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 138

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 139 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 195

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 196 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 255

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 256 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 303

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 304 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 363

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYT 531
             + V++I  G     VL S+ E Y+
Sbjct: 364 KYHIVKQIFSGGDQTFVLCSKYENYS 389



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 15/218 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDA 281
           VP+ ++      +  ++CG  H   +   G+ F+WG+   G+LG G +    + P+ + +
Sbjct: 131 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 190

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+ I +  VA G  H+ A++LSG ++ WG +N   G LG  +E     P  +   L    
Sbjct: 191 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQK 247

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HTAV+T +G +FTFG G+ G LGH        PR V  L G    + ACG 
Sbjct: 248 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 307

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
            HT A V            SSG ++ +G G RG+LG G
Sbjct: 308 QHTLAFVP-----------SSGLIYAFGCGARGQLGTG 334



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 160 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 210

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T SG ++T+
Sbjct: 211 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 270

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 271 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 327

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 328 RGQLGTGHTCNVKCPSPV 345


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 183/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        Q++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------QDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  ++
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G E  + +P+ +   L  I +  ++CG +H+  ++   ++F++G    G LG
Sbjct: 114 GQLGL--PGTEEYIRVPRNIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170

Query: 374 HGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G  +   S+P+ + SL G+   + A G            G+ S     SG +F WG   
Sbjct: 171 LGFELKRQSSPQLIKSLLGIPFTQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +  +      C+ +  SG DQS 
Sbjct: 339 FTVKGNWFPYSGKCLPESDGEEFFCVKRIFSGGDQSF 375



 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG  T DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT-DGQLG----- 117

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
                G +    VP+ ++S   + +  IACG  H+  ++K  EVFSWG+   G+LG G +
Sbjct: 118 ---LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               S P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 LKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRFV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVQDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    Q++CG+  ++AL+    V++ G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFV----EEIACGDYHVAVLTSRTEVYTWGKGANG 538
             +GQLG      +L  +   +L K+ +     ++A G  H  VLT    ++ WG+   G
Sbjct: 164 NKHGQLG---LGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 183/397 (46%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        Q++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------QDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  ++
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G E  + +P+ +   L  I +  ++CG +H+  ++   ++F++G    G LG
Sbjct: 114 GQLGL--PGTEEYIRVPRNIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170

Query: 374 HGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G  +   S+P+ + SL G+   + A G            G+ S     SG +F WG   
Sbjct: 171 LGFELKRQSSPQLIKSLLGIPFTQVAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +IACG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +  +      C+ +  SG DQS 
Sbjct: 339 FTVKGNWFPYSGKCLPESDGEEFFCVKRIFSGGDQSF 375



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G V+ WG  T DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT-DGQLG----- 117

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
                G +    VP+ ++S   + +  IACG  H+  ++K  EVFSWG+   G+LG G +
Sbjct: 118 ---LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
               S P+LI +L  I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++
Sbjct: 175 LKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRFV 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    +  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT+A V            SSG+++++G G  G+LG G    R  P  
Sbjct: 292 MGSIVTQIACGRQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  +    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVQDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P +V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L +    Q++CG+  ++AL+    V++ G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFV----EEIACGDYHVAVLTSRTEVYTWGKGANG 538
             +GQLG      +L  +   +L K+ +     ++A G  H  VLT    ++ WG+   G
Sbjct: 164 NKHGQLG---LGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG  D +DR  P+L+++L+ +++  I CG   TAA+
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 189/415 (45%), Gaps = 35/415 (8%)

Query: 195 WGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGE 253
           WG  T  G LG GGI         + D F+ K        +V+++ CG RH   V   G 
Sbjct: 4   WGN-TSFGQLGLGGIDEEVVLEPRRCDFFINK--------NVRDVGCGSRHTVFVLDDGT 54

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V++ G    G+LGH  D     P+ + AL    +  V+CGE HT A+   G +++WG  +
Sbjct: 55  VYTCGCNDLGQLGH--DKSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG--H 110

Query: 314 CNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
             +G +G    E  + +P+ +   L  + +  V+CG  H+  ++    +F++G   +G L
Sbjct: 111 AVYGQIGLSTAEEYIRVPRNIKS-LSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQL 169

Query: 373 GHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           G G  I     PR + SL G+     A G  H+ A+              SG +F WG  
Sbjct: 170 GLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALT------------ISGAIFGWGRN 217

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
             G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG  
Sbjct: 218 KFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 492 KANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
             N ++  R   +L  + V +IACG  H +A + S   +Y++G G NG+LG G T +R  
Sbjct: 278 STNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKS 337

Query: 551 PSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM-----CSGCRIPFNFKR 600
           P  V+         +          CL +  SG DQS         C  P +F+R
Sbjct: 338 PFTVKGNWLTYEDYVRHLPEANGCYCLKRIYSGGDQSFAHYITIQNCHPPDDFRR 392


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 199/406 (49%), Gaps = 70/406 (17%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE-----SAVVLDVQNIACGGRH 244
            G+++ WG     G LG G+  + + +       +PK V+     S + +    + CGG H
Sbjct: 1141 GELYTWG-SNQSGQLGHGLEVNKTLS-------LPKRVDFFRGKSPIFM----VECGGEH 1188

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
               V     V+SWG +  G+LGHG  + + S PK+I+ L    ++ +A G  H   +  S
Sbjct: 1189 TIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKS 1248

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKL--NGPLEGIH------VSSVSCGPWHTAVV 355
            G+++++G  +  FG LG G+  S  +P ++  N  + G+       ++ ++CG  H+ + 
Sbjct: 1249 GELFSFGYGD--FGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVIC 1306

Query: 356  TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            +  G+++++G G  G LGH    ++S PR +++L+G+   + +CG +HT A  ++     
Sbjct: 1307 SENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGV--TKISCGHFHTVATTDL----- 1359

Query: 416  SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT--- 472
                     +++WG G+  +LGH   +   VP  V   ++ N  +V CG + T+ +T   
Sbjct: 1360 -------KNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPD 1412

Query: 473  ------------------TTGHVYTMGSPVYGQLG------DPKANGKLPTRVEGKLTKN 508
                              ++  +Y  GS  +G+LG       P  +  +PT ++G  + N
Sbjct: 1413 DLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLN 1472

Query: 509  FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 554
             ++ I+CG    A++TS   +Y WG G  G++G+G  DD   P+ +
Sbjct: 1473 LID-ISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI 1517



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 183/373 (49%), Gaps = 48/373 (12%)

Query: 238  IACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNIN-VELVACGE 294
            ++CG  H A++T  GE+++WG    G+LGHG  V+  +S PK +D  +  + + +V CG 
Sbjct: 1127 VSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGG 1186

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
             HT AV  +  +Y+WG     FG LGHG +       K+   L G  + +++ G  H  V
Sbjct: 1187 EHTIAVDSNYFVYSWGSD--KFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244

Query: 355  VTSAGQLFTFGDGTFGVLGHGDRISVSTPR--EVDSLKGLRTVRAACGVWHT--AAVVEV 410
            +  +G+LF+FG G FG LG G   S + P   E++++ G        G+ H     + ++
Sbjct: 1245 LKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMG--------GLQHHDGGKITQI 1296

Query: 411  MVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
              G   S  CS +G++++WG G +G+LGH   E    P  +  L      ++SCGH  TV
Sbjct: 1297 ACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETL--RGVTKISCGHFHTV 1354

Query: 470  ALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT---- 524
            A T   +VY+ GS  + +LG     +  +P  V+  + KN V ++ CG  H   +T    
Sbjct: 1355 ATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKN-VSKVVCGQNHTMTITFPDD 1413

Query: 525  -----------------SRTEVYTWGKGANGRLGH-GDTD----DRNFPSLVEALKDKQV 562
                             S + +Y WG   +G+LG  GD      D+  P+ ++ +    +
Sbjct: 1414 LNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNL 1473

Query: 563  KSIVCGTSFTAAI 575
              I CG+ F+A I
Sbjct: 1474 IDISCGSDFSAMI 1486



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 12/156 (7%)

Query: 432  DRGRLGHG---DKEARLVPTCVAALV-EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            D  ++ H    D E +  P  +A L  E    +VSCG      +T  G +YT GS   GQ
Sbjct: 1096 DETKINHKIRIDPELKRFP--MAPLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQ 1153

Query: 488  LGDPKANGK---LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG- 543
            LG      K   LP RV+    K+ +  + CG  H   + S   VY+WG    G+LGHG 
Sbjct: 1154 LGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGT 1213

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK 579
               +++ P ++E L  +++++I  G  F   I L K
Sbjct: 1214 KAVNQSRPKVIEELTGQKIQAIAAG--FAHNIVLKK 1247


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 175/345 (50%), Gaps = 29/345 (8%)

Query: 256 SWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 315
           ++G  L G+LG G +     P  ++AL    +  VA G+  T A++L GD+YTWG     
Sbjct: 62  TFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSG--E 119

Query: 316 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           +G LGH ++ +  LP+ +   L+G ++  VS G  H A +   G L+ +G       G G
Sbjct: 120 YGKLGHNDDSNENLPRLVE-ALKGKNIVKVSIGGNHMAAIDKDGHLYCWGRAASA--GSG 176

Query: 376 DRISVSTPREVD-SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRG 434
               V  PR +   L+  + +  +CG  HTAAV E             G+++TWG+G  G
Sbjct: 177 GTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTE------------KGEVWTWGNGYEG 224

Query: 435 RLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN 494
            LGHG+K ++  P  V +L E     V+CG   T+ +  +G +Y+ G+  YGQLG  +++
Sbjct: 225 ELGHGEKNSQYQPKKVQSLTE-KVVDVACGRDFTIFVCESG-LYSCGADDYGQLGLGRSH 282

Query: 495 G----KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
           G    + P  + G    + V  I+ GDYHV  L     VYTWG G  G+LGHG+  D + 
Sbjct: 283 GERFVQTPRSLSGTGLSDVV-AISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSL 341

Query: 551 PSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSGVDQSMCSG 591
              V+ L++ ++  + CG   TAA+     L+ W  G D  +  G
Sbjct: 342 AKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGRG 386



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 183/364 (50%), Gaps = 32/364 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  VE+     +  +A G    A ++  G+V++WG    G+LGH  DS+ + P+L++ALK
Sbjct: 82  PFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALK 141

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
             N+  V+ G +H  A+   G +Y WG +       G G    +++P+ + G LE   V 
Sbjct: 142 GKNIVKVSIGGNHMAAIDKDGHLYCWGRAASA----GSGGTEHVFIPRLIKGDLEKEKVI 197

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
           SVSCG  HTA VT  G+++T+G+G  G LGHG++ S   P++V SL   + V  ACG   
Sbjct: 198 SVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLT-EKVVDVACGRDF 256

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG----HGDKEARLVPTCVAALVEPNFC 459
           T  V            C SG L++ G  D G+LG    HG++  +  P  ++     +  
Sbjct: 257 TIFV------------CESG-LYSCGADDYGQLGLGRSHGERFVQ-TPRSLSGTGLSDVV 302

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNF-VEEIACGD 517
            +S G     AL   G VYT G    GQLG   KA+  L   V+    +NF + ++ACG 
Sbjct: 303 AISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKPVDN--LRNFEIVQVACGG 360

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDD-----RNFPSLVEALKDKQVKSIVCGTSFT 572
            H A +T    +YTWG+G +G+LG G   +     R  P  V +L    V  +  G+  +
Sbjct: 361 GHTAAVTKDGVLYTWGRGRDGQLGRGGELESIASYRTSPVQVTSLPAGAVLYVTLGSDHS 420

Query: 573 AAIC 576
           A +C
Sbjct: 421 AVLC 424



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 141/309 (45%), Gaps = 43/309 (13%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGV----KMDSFVPKAVESAVVLDVQNIACGGRHA 245
           GDV+ WG              SG Y  +      +  +P+ VE+    ++  ++ GG H 
Sbjct: 110 GDVYTWG--------------SGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHM 155

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA-LKNINVELVACGEHHTCAVTLSG 304
           A + K G ++ WG       G G    V  P+LI   L+   V  V+CG  HT AVT  G
Sbjct: 156 AAIDKDGHLYCWGR--AASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKG 213

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           +++TWG  N   G LGHG + S + PKK+    E   V  V+CG   T  V  +G L++ 
Sbjct: 214 EVWTWG--NGYEGELGHGEKNSQYQPKKVQSLTE--KVVDVACGRDFTIFVCESG-LYSC 268

Query: 365 GDGTFGVLG----HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           G   +G LG    HG+R  V TPR +        V  + G +H  A+             
Sbjct: 269 GADDYGQLGLGRSHGERF-VQTPRSLSGTGLSDVVAISAGDYHVCALGR----------- 316

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
             G ++TWG G  G+LGHG+K    +   V  L      QV+CG   T A+T  G +YT 
Sbjct: 317 -DGLVYTWGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTW 375

Query: 481 GSPVYGQLG 489
           G    GQLG
Sbjct: 376 GRGRDGQLG 384



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 107/224 (47%), Gaps = 14/224 (6%)

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           A + +   L TFG    G LG G       P  V++L G R V  A G   TAA+     
Sbjct: 52  AALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAI----- 106

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                     G ++TWG G+ G+LGH D     +P  V AL   N  +VS G +   A+ 
Sbjct: 107 -------SLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAID 159

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             GH+Y  G       G  + +  +P  ++G L K  V  ++CG  H A +T + EV+TW
Sbjct: 160 KDGHLYCWGRAASAGSGGTE-HVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTW 218

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
           G G  G LGHG+ + +  P  V++L +K V  + CG  FT  +C
Sbjct: 219 GNGYEGELGHGEKNSQYQPKKVQSLTEK-VVDVACGRDFTIFVC 261



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 6/100 (6%)

Query: 207 GIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 265
           G+ R G    G K D  + K V++    ++  +ACGG H A VTK G +++WG    G+L
Sbjct: 324 GLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQL 383

Query: 266 GHG-----VDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           G G     + S  + P  + +L    V  V  G  H+  +
Sbjct: 384 GRGGELESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVL 423


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 199/431 (46%), Gaps = 77/431 (17%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            DVF+WG             R G  A    +  VP    S      Q + CG     ++  
Sbjct: 1123 DVFLWGA-----------GRHGQLAEAGRNILVPTTAPS--FSQAQQVVCGQNCTFVIQP 1169

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+    +I AL+   V +LV +CG + H+ A+T SG+++
Sbjct: 1170 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1229

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV---------------------- 345
            +WG  + ++G LGHGN      P+++   L+G  V  V                      
Sbjct: 1230 SWG--DGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQ 1286

Query: 346  -SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL---RTVRAACGV 401
             SCG  H+AVVT+ G+LFTFG+G +G LG G+  +   P  V +L+G    +    ACG+
Sbjct: 1287 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANVACGL 1346

Query: 402  WHTAAVVEVMVGSSSSSNCSSGKLFTW--GDGDRGRLGHGDKEARLVPTCVAALVE-PNF 458
             HT  V             S+  +  W  GDGD G+LG G+  A+  P   A +++ P  
Sbjct: 1347 NHTLVV-------------SADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTL 1393

Query: 459  CQ--------------VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEG 503
            CQ              V+CG   +VALT  G V+T G      L + +A N   P ++  
Sbjct: 1394 CQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPA 1453

Query: 504  KLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
             L+   V+++A G  H   L+S  +VY WG  + G+LG G T+    P++V  L+ K + 
Sbjct: 1454 -LSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKHIH 1512

Query: 564  SIVCGTSFTAA 574
             +  G   +AA
Sbjct: 1513 QVSAGRCHSAA 1523



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 156/332 (46%), Gaps = 62/332 (18%)

Query: 239  ACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV------- 290
            +CG   H+  +T+ GEVFSWG+   G+LGHG       P+ I+AL+   V  V       
Sbjct: 1212 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAG 1271

Query: 291  ----------------ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
                            +CG  H+  VT  G ++T+G  N ++G LG GN  +  LP+++ 
Sbjct: 1272 AGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFG--NGDYGRLGLGNTSNKKLPERVA 1329

Query: 335  GPLEGIH---VSSVSCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRISVSTPR------ 384
              LEG     V++V+CG  HT VV++ G + + FGDG +G LG G+  + S+P+      
Sbjct: 1330 A-LEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVIL 1388

Query: 385  ---------EVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
                     +VD L G+   + ACG   + A+ +             G++FT+G  DR  
Sbjct: 1389 QSPTLCQELKVDVLCGISIKKVACGTQFSVALTK------------DGRVFTFGQ-DR-L 1434

Query: 436  LGHGDKEARL--VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA 493
            +G  +  AR    P  + AL   +   V+ G   T+AL++TG VY  GS   GQLG    
Sbjct: 1435 IGLPESRARNHNRPQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHT 1494

Query: 494  NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            N      V   L    + +++ G  H A  T+
Sbjct: 1495 NHVREPTVVTMLQGKHIHQVSAGRCHSAAWTA 1526



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 192/445 (43%), Gaps = 83/445 (18%)

Query: 193  FIWGECTGDGILGG-GIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            + W +C    +     + R G++     DSF    +E     D+  +    + A+ + +Q
Sbjct: 1049 WAWLDCFSTTVKAAEALARGGAFP----DSFCVPDMEPVAKEDLALLMDNSKWASGLDEQ 1104

Query: 252  GEVFSWGE------ELGGRLGHGVDSDVSHPKLIDALKNINV----------ELVACGEH 295
              + SW         LGG+    +     H +L +A +NI V          + V CG++
Sbjct: 1105 --IMSWATSRPEDWHLGGKCDVFLWGAGRHGQLAEAGRNILVPTTAPSFSQAQQVVCGQN 1162

Query: 296  HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHT 352
             T  +  +G +   G  +  +G LG GN   L +   ++  L+G  V+ +  SCG   H+
Sbjct: 1163 CTFVIQPNGTVLACGEGS--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHS 1219

Query: 353  AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV-----RAA--------- 398
              +T +G++F++GDG +G LGHG+      PR++++L+G   V     RAA         
Sbjct: 1220 MALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRS 1279

Query: 399  ---------CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
                     CG  H+A V             + GKLFT+G+GD GRLG G+   + +P  
Sbjct: 1280 HLHLRLQMSCGFKHSAVVT------------ADGKLFTFGNGDYGRLGLGNTSNKKLPER 1327

Query: 450  VAALVEPNFCQVS---CGHSLTVALTTTGH-VYTMGSPVYGQLGDPKANGKLPTRVEGKL 505
            VAAL      QV+   CG + T+ ++  G  V+  G   YG+LG   +  K   +V   +
Sbjct: 1328 VAALEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVI 1387

Query: 506  TKN---------------FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
             ++                ++++ACG      LT    V+T+G+     L      + N 
Sbjct: 1388 LQSPTLCQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNR 1447

Query: 551  PSLVEALKDKQVKSIVCGTSFTAAI 575
            P  + AL    V+ +  G   T A+
Sbjct: 1448 PQQLPALSGVHVQDVAVGAEHTLAL 1472



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 6/155 (3%)

Query: 425  LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
            +F WG G  G+L    +   LVPT   +  +    QV CG + T  +   G V   G   
Sbjct: 1124 VFLWGAGRHGQLAEAGRNI-LVPTTAPSFSQAQ--QVVCGQNCTFVIQPNGTVLACGEGS 1180

Query: 485  YGQLGDPKANGKLPTRVEGKLTKNFVEEI--ACG-DYHVAVLTSRTEVYTWGKGANGRLG 541
            YG+LG   ++      V   L    V ++  +CG D H   LT   EV++WG G  G+LG
Sbjct: 1181 YGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLG 1240

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
            HG++D +  P  +EAL+ ++V  +  G +  A +C
Sbjct: 1241 HGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLC 1275



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 42/78 (53%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P+ + +   + VQ++A G  H   ++  G+V++WG    G+LG G  + V  P ++  L+
Sbjct: 1448 PQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQ 1507

Query: 284  NINVELVACGEHHTCAVT 301
              ++  V+ G  H+ A T
Sbjct: 1508 GKHIHQVSAGRCHSAAWT 1525


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/324 (33%), Positives = 171/324 (52%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGANTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDQGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   +   G            
Sbjct: 151 ALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGRNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV  G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 151/323 (46%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ QG++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGRN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V  G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 120/252 (47%), Gaps = 26/252 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           G +F WG  + DG LG              DS  VP+ ++      +  ++CG  H   +
Sbjct: 103 GQLFSWGAGS-DGQLG---------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL 152

Query: 249 TKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
              G+ F+WG    G+LG G +    + P+ + +L+ I +  V  G  H+ A++LSG ++
Sbjct: 153 AADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVF 212

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG +N   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G
Sbjct: 213 GWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           + G LGH        PR V  L G    + ACG  HT A V            SSG ++ 
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYA 318

Query: 428 WGDGDRGRLGHG 439
           +G G RG+LG G
Sbjct: 319 FGCGARGQLGTG 330


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 194/405 (47%), Gaps = 29/405 (7%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           D+F WG  +   +  GGI              +P  +       ++ IACG RH   +T 
Sbjct: 2   DLFCWGNASHGQLGMGGIEDE--------QILIPSQIPWKPDAPLRQIACGHRHTLFLTA 53

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            G+V++ G     +LGH + +    P LI  L+N  V  +ACG  H+ A+T  G + +WG
Sbjct: 54  NGKVYACGNNDQAQLGHNLPT--KRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWG 111

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            ++C  G LG   + S+    K+   L   HV  ++CG  H+  +TS G+L+++G   +G
Sbjct: 112 DNDC--GQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYG 169

Query: 371 VLGHGDRISVS---TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            LG      +S    P  + +L G+     ACG            G+ S     S  +F 
Sbjct: 170 QLGVKPPQELSHCNYPLRLTTLLGIPLATIACG------------GNHSFLISKSSAVFG 217

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G  + G+LG  D+  R  PT +  L       V+CG   +V LT  G V+T G+  YGQ
Sbjct: 218 FGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQ 277

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG      ++  R+  +L  + + ++ACG+ H +A++ SR  VY +G G++G+LG+  T+
Sbjct: 278 LGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTN 337

Query: 547 DRNFPS-LVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCS 590
               P  ++         +++      A++ +H+  SG DQS+ +
Sbjct: 338 SVTLPQEVLGPWVSPSDSALLQSNDAKASVVIHQIFSGGDQSIVT 382


>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
 gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
          Length = 1080

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 185/409 (45%), Gaps = 61/409 (14%)

Query: 214 YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
           +A   ++S  P+ V++   ++  ++A GG   A+V++ GE++ WG    G+LG G   D 
Sbjct: 92  FAETSLESSSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDA 151

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS-NCNFGLLGHGNEMSLWL--- 329
           S P+++ AL+   V++VAC + HT      G  Y WG + N   GL G     S  L   
Sbjct: 152 SVPRVVKALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVS 211

Query: 330 -----------------------PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ----LF 362
                                  P+ L   L G  ++ V+CG +HTA +    Q    LF
Sbjct: 212 APPGAPTKGARTEPLASACLVCTPRVLES-LCGYFITDVACGIYHTAFLGVYEQHKTSLF 270

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           T G G  G LGHGD      P  V +L+ L     ACG  HTA V             S 
Sbjct: 271 TCGLGLNGRLGHGDEEDRHLPTPVHALENLNITAIACGAHHTACVT------------SG 318

Query: 423 GKLFTWGDGDRGRLGHGD-KEARLVPTCVAA-LVEPNFCQVSCGHSLTVALTTTGHVYT- 479
           G L+ WG    G+LG G  + ++L+P  V   L       V+ G   +  +TT G +YT 
Sbjct: 319 GTLYMWGGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELYTW 378

Query: 480 -----MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
                +G  V G+     ++  LP RVE  L   FV  + CGD H A +     V+ WG 
Sbjct: 379 GQGRRLGHEVQGE-----SDEFLPRRVE-ALVGLFVIHVVCGDAHTACIVENGNVWAWGT 432

Query: 535 GANGRLGHGDTD-DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVS 582
             +  LGHGD +   N PS + AL  K V  + C  +FTAA C  + VS
Sbjct: 433 --SRILGHGDLEAPPNRPSCLRALSGKGVVQLSCAPTFTAAFCDPQRVS 479



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 13/111 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+++ WG+            R G     + D F+P+ VE+ V L V ++ CG  H A + 
Sbjct: 373 GELYTWGQG----------RRLGHEVQGESDEFLPRRVEALVGLFVIHVVCGDAHTACIV 422

Query: 250 KQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCA 299
           + G V++WG      LGHG +++  + P  + AL    V  ++C    T A
Sbjct: 423 ENGNVWAWGTSR--ILGHGDLEAPPNRPSCLRALSGKGVVQLSCAPTFTAA 471


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 181/369 (49%), Gaps = 30/369 (8%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           +++ WG  T  G LG GGI               P+ +       VQ +ACG RH   +T
Sbjct: 6   ELYCWGS-TSHGQLGLGGIEDE--------QILTPRQIPWTPDTAVQQVACGHRHTLFLT 56

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G+V++ G     +LGH  D     P+LI  L++  +  ++CG  H+ A++  G + +W
Sbjct: 57  ATGKVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G ++C  G LGH  E  +    K+   L    V  ++CG  H+  +TS G+L+++G   +
Sbjct: 115 GDNDC--GQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172

Query: 370 GVLG---HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G LG     D    + P  + +L G+     ACG            G+ S     SG +F
Sbjct: 173 GQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSGAVF 220

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            WG  + G+LG  D+  R  PT +  L       V+CG   +V LT  G V+T G+  YG
Sbjct: 221 GWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDT 545
           QLG   ++ ++  R+  +L  + + ++ACG+ H +A++ SR +VY +G G++G+LG   T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRST 340

Query: 546 DDRNFPSLV 554
                P +V
Sbjct: 341 KSLMLPQVV 349



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 156/333 (46%), Gaps = 31/333 (9%)

Query: 253 EVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           E++ WG    G+LG G   D  +  P+ I    +  V+ VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 311 GSNCNFGLLGHGNEMSLWLPKK---LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            ++  +  LGH       LP K   L   L+   +  +SCG  H+  ++  GQ+ ++GD 
Sbjct: 66  SND--YSQLGHD------LPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 368 TFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
             G LGH  ++  V  P+ V  L     V+ ACG  H+ A+             S G+L+
Sbjct: 118 DCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT------------SCGELY 165

Query: 427 TWGDGDRGRLG---HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           +WG    G+LG     D      P  +  L+      ++CG + +  ++ +G V+  G  
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 484 VYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             GQLG + + N   PT+++   T   V  +ACGD     LT+   V+T G GA G+LGH
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G + +   P +V  L    +  + CG   T A+
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 85/175 (48%), Gaps = 16/175 (9%)

Query: 421 SSGK-LFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
           +SGK L+ WG    G+LG G  + E  L P  +    +    QV+CGH  T+ LT TG V
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKV 61

Query: 478 YTMGSPVYGQLGDPKANGKLPTR---VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           Y  GS  Y QLG       LPT+   +  +L    + +I+CG  H   L+   +V +WG 
Sbjct: 62  YACGSNDYSQLGH-----DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116

Query: 535 GANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGV 584
              G+LGH  + +    P +V  L  K V  I CG + + A+     L+ W S +
Sbjct: 117 NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 170/357 (47%), Gaps = 20/357 (5%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           VQ++ CG RH   V   G V++ G    G+LGH  +     P+ + AL   N+  V+CGE
Sbjct: 36  VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKRPEQVGALDAQNIVTVSCGE 93

Query: 295 HHTCAVTLSGDMYTWGGS-NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT A+   G +Y WG + +   GL   G E    +P+ +   L  I +  V+CG +H+ 
Sbjct: 94  AHTLALNDKGQVYAWGFAVDGQLGL--SGTEEYTRVPRNIKS-LSDIQIVQVACGYFHSL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            ++   ++F++G   +G LG G +    ++P+ + SL G+   + A G            
Sbjct: 151 ALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S     SG +F WG    G+LG  D+  R VP  + +L       +SCG   T ALT
Sbjct: 199 GAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT-EVYT 531
             G V+T G+  YGQLG      ++  R   +L  N V +IACG  H +     T  +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYS 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
           +G G NG+LG G T +R  P  V+         I   +      C+ +  SG DQS 
Sbjct: 319 FGLGGNGQLGMGTTSNRKSPFPVKGNWLPYNGQIPLNSDGEDYYCVKRIFSGGDQSF 375



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 132/262 (50%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG         +G +  + VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWGFAV-DGQLG--------LSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVFSWG+   G+LG G +    + P++I +L  I    +A G  H+  +TLSG ++ 
Sbjct: 154 KGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E   ++P  L   L    +  +SCG  HTA +T  G +FTFG G 
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    + ACG  HT+A V            S+G+++++
Sbjct: 271 YGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVP-----------STGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGMGTTSNRKSPFPV 341



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 5/154 (3%)

Query: 425 LFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +  WG+   G+LG G  D+E  L P   +  V      V CG   TV +   G VYT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
              GQLG  K+  K P +V G L    +  ++CG+ H   L  + +VY WG   +G+LG 
Sbjct: 61  NDLGQLGHEKSR-KRPEQV-GALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGL 118

Query: 543 GDTDDRN-FPSLVEALKDKQVKSIVCGTSFTAAI 575
             T++    P  +++L D Q+  + CG   + A+
Sbjct: 119 SGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLAL 152



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 137/334 (41%), Gaps = 65/334 (19%)

Query: 108 YESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLS-SGGSD------GRTGHL-- 158
           Y   P+N+  K+LSD  +           + ACG  +SL+ S GS+       + G L  
Sbjct: 124 YTRVPRNI--KSLSDIQI----------VQVACGYFHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 159 -----KGLSGDTFRVSLSSAVSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSG 212
                K  S    +  L    +  + G  H    +L G VF WG     G LG       
Sbjct: 172 GYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGR-NKFGQLG------- 223

Query: 213 SYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
                + D +VP  ++S     +  I+CG  H A +TK+G VF++G    G+LGH   + 
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAH 281

Query: 273 VSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG-GSNCNFGLLGHGNEMSL--- 327
             +P+ +  L    V  +ACG  HT A V  +G +Y++G G N   G+    N  S    
Sbjct: 282 EINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFPV 341

Query: 328 ---WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 384
              WLP     PL        S G  +  V     ++F+ GD +F            TP+
Sbjct: 342 KGNWLPYNGQIPLN-------SDGEDYYCV----KRIFSGGDQSFS--------HYVTPQ 382

Query: 385 EVDSLKGLRTVRAACGVWHT-AAVVEVMVGSSSS 417
           ++      R   A+  +W    A ++ ++  SSS
Sbjct: 383 DLIPADDFRYPNASKQIWTVNEAFIQRLINYSSS 416


>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
          Length = 918

 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 161/333 (48%), Gaps = 44/333 (13%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           ++ P+L+DALKNIN E V+ G      V  SG++Y WG +  + G LG G+     +P+ 
Sbjct: 1   MASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGAN--SEGQLGTGDRRDASVPRL 58

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRI------------- 378
           +   L G  V +V+C   HT      G  + +G    G LG HG  I             
Sbjct: 59  VKA-LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPAT 117

Query: 379 -----------SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
                      +V TPR ++SL G      ACG +H+A      +G       S   LFT
Sbjct: 118 GARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSA-----FLGIYEQDRTS---LFT 169

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
            G G  GRLGHGD+E R +PT V AL   N   ++CG   T  +T+ G +YT G   +G+
Sbjct: 170 CGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGK 229

Query: 488 LGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH--- 542
           LG     G   LP  V G L    V  +A G  H A +T+  E+YTWG+G   RLGH   
Sbjct: 230 LGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGR--RLGHEVQ 287

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G++D+   P  VEAL    V  +VCG + TA I
Sbjct: 288 GESDE-ILPRRVEALLGLFVIHVVCGDAHTACI 319



 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 180/395 (45%), Gaps = 57/395 (14%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+ V++   ++ + ++ GG   A+V   GE++ WG    G+LG G   D S P+L+ AL 
Sbjct: 4   PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALH 63

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGS-NCNFGLLGHGNEMSLWL------------- 329
              V+ VAC + HT      G  Y WG + N   GL G     S  L             
Sbjct: 64  GKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEP 123

Query: 330 ---------PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ----LFTFGDGTFGVLGHGD 376
                    P+ L   L G  ++ V+CGP+H+A +    Q    LFT G G  G LGHGD
Sbjct: 124 LASACAVCTPRVLES-LCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGD 182

Query: 377 RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL 436
                 P  V +L+ +     ACG  HTA V             S+G L+TWG    G+L
Sbjct: 183 EEDRHLPTAVHALENVNITAIACGAHHTACVT------------SAGTLYTWGGAAFGKL 230

Query: 437 GHGD-KEARLVPTCVAA-LVEPNFCQVSCGHSLTVALTTTGHVYT------MGSPVYGQL 488
           G G  + ++L+P  V+  L       V+ G   +  +TT G +YT      +G  V G+ 
Sbjct: 231 GLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRLGHEVQGE- 289

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD-D 547
               ++  LP RVE  L   FV  + CGD H A +     V+ WG   +  LGHGD +  
Sbjct: 290 ----SDEILPRRVE-ALLGLFVIHVVCGDAHTACIVENGNVWAWGT--SRILGHGDPEVP 342

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVS 582
            N P+ + AL  K V  + C ++FT A C  + VS
Sbjct: 343 PNRPACLRALNGKGVVQLSCASTFTVAFCDPQRVS 377



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 166/369 (44%), Gaps = 68/369 (18%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++++WG    +G LG G  R         D+ VP+ V++     V+ +AC   H     
Sbjct: 32  GELYMWG-ANSEGQLGTGDRR---------DASVPRLVKALHGKVVKAVACSQEHTVCCL 81

Query: 250 KQGEVFSWGEELGGRLG-HGVD------------------------SDVSHPKLIDALKN 284
             G  ++WG  L GRLG HG+                           V  P+++++L  
Sbjct: 82  DDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCG 141

Query: 285 INVELVACGEHHTCAVTL----SGDMYTWGGSNCNFGL---LGHGNEMSLWLPKKLNGPL 337
             +  VACG +H+  + +       ++T     C  GL   LGHG+E    LP  ++  L
Sbjct: 142 YFIADVACGPYHSAFLGIYEQDRTSLFT-----CGLGLNGRLGHGDEEDRHLPTAVHA-L 195

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVR 396
           E +++++++CG  HTA VTSAG L+T+G   FG LG G  R S   P+ V          
Sbjct: 196 ENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVS--------- 246

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSS-GKLFTWGDGDRGRLGH---GDKEARLVPTCVAA 452
              G     AVV V +GS  S+  ++ G+L+TWG G   RLGH   G+ +  ++P  V A
Sbjct: 247 ---GPLRNKAVVSVALGSQHSACVTTDGELYTWGQGR--RLGHEVQGESD-EILPRRVEA 300

Query: 453 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE 512
           L+      V CG + T  +   G+V+  G+      GDP+     P  +     K  V+ 
Sbjct: 301 LLGLFVIHVVCGDAHTACIVENGNVWAWGTSRILGHGDPEVPPNRPACLRALNGKGVVQL 360

Query: 513 IACGDYHVA 521
                + VA
Sbjct: 361 SCASTFTVA 369



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 99/198 (50%), Gaps = 10/198 (5%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVS 274
           G + D  +P AV +   +++  IACG  H A VT  G +++WG    G+LG G       
Sbjct: 181 GDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQL 240

Query: 275 HPKLIDA-LKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKK 332
            PK +   L+N  V  VA G  H+  VT  G++YTWG G      + G  +E+   LP++
Sbjct: 241 LPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRLGHEVQGESDEI---LPRR 297

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKG 391
           +   L G+ V  V CG  HTA +   G ++ +  GT  +LGHGD  +  + P  + +L G
Sbjct: 298 VEA-LLGLFVIHVVCGDAHTACIVENGNVWAW--GTSRILGHGDPEVPPNRPACLRALNG 354

Query: 392 LRTVRAACGVWHTAAVVE 409
              V+ +C    T A  +
Sbjct: 355 KGVVQLSCASTFTVAFCD 372


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 189/415 (45%), Gaps = 35/415 (8%)

Query: 195 WGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGE 253
           WG  T  G LG GGI         + D F+ K        +V+++ CG RH   V   G 
Sbjct: 4   WGN-TSFGQLGLGGIDEEVVLEPRRCDFFINK--------NVRDVGCGSRHTVFVLDDGT 54

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V++ G    G+LGH  D     P+ + AL    +  V+CGE HT A+   G +++WG  +
Sbjct: 55  VYTCGCNDLGQLGH--DKSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG--H 110

Query: 314 CNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
             +G +G    E  + +P+ +   L  + +  V+CG  H+  ++    +F++G   +G L
Sbjct: 111 AVYGQIGLSTAEEYIRVPRNIKS-LSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQL 169

Query: 373 GHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           G G  I     PR + SL G+     A G  H+ A+              SG +F WG  
Sbjct: 170 GLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALT------------ISGAIFGWGRN 217

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
             G+LG  D+  R VP  + +L       + CG   T ALT  G V+T G+  YGQLG  
Sbjct: 218 KFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 492 KANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
             N ++  R   +L  + V +IACG  H +A + S   +Y++G G NG+LG G T +R  
Sbjct: 278 STNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKS 337

Query: 551 PSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM-----CSGCRIPFNFKR 600
           P  V+         +          CL +  SG DQS         C  P +F+R
Sbjct: 338 PFTVKGNWLTYEDYVRHLPEANGCYCLKRIYSGGDQSFAHYITIQNCHPPDDFRR 392


>gi|313236433|emb|CBY11750.1| unnamed protein product [Oikopleura dioica]
          Length = 2239

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/344 (33%), Positives = 172/344 (50%), Gaps = 24/344 (6%)

Query: 234  DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC- 292
            ++Q I  G     L +  G V S GE   GRLGHG   D+S P L+ AL+   V  ++  
Sbjct: 1417 NMQTIELGLNCTFLCSASGAVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSS 1476

Query: 293  --GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
               + HT A+T SG+++TWG  + ++G LGHGN      P +L   L G  V    CG  
Sbjct: 1477 VGSDGHTLAITESGELFTWG--DGDYGKLGHGNSERQRRP-RLVETLVGETVVDGCCGYK 1533

Query: 351  HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            HTAVVT+ G L+TFG G +G LGHG+  S  TP  V   + + +V  +CG+ HT A+   
Sbjct: 1534 HTAVVTATGYLYTFGYGDYGRLGHGNTTSKKTPTLVHDCQNIASV--SCGLNHTLALSR- 1590

Query: 411  MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                          ++ +GDGD G+LG G+  A   P  +AAL       V CGH  +V 
Sbjct: 1591 ----------DGMTVWAFGDGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVF 1640

Query: 471  LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
            L   G VY  G   +  +G P     +PT++E    + F  +I+CG  +   L     V+
Sbjct: 1641 LAINGDVYVCGQDAFNGIGGP-GQTVIPTKLETINKRVF--QISCGAEYTLALDEDGNVW 1697

Query: 531  TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            +WG  ++G++G G  +  + P L   L   ++K +  G + + A
Sbjct: 1698 SWGNNSDGQVGCGHFNKVHEPLL--TLTGHRIKQVRAGKTHSIA 1739



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 142/288 (49%), Gaps = 29/288 (10%)

Query: 307  YTWGGSNCNFGLLGHGNEM--SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            Y WGG     G LG    +     LP++L       ++ ++  G   T + +++G + + 
Sbjct: 1386 YVWGG--VRHGQLGLNMNVGRHCALPRRLEA---FDNMQTIELGLNCTFLCSASGAVTST 1440

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW---HTAAVVEVMVGSSSSSNCS 421
            G+G++G LGHG+   +S P  V +L+G      +  V    HT A+ E            
Sbjct: 1441 GEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITE------------ 1488

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            SG+LFTWGDGD G+LGHG+ E +  P  V  LV        CG+  T  +T TG++YT G
Sbjct: 1489 SGELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTATGYLYTFG 1548

Query: 482  SPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSR-TEVYTWGKGANGR 539
               YG+LG       K PT V     +N +  ++CG  H   L+     V+ +G G  G+
Sbjct: 1549 YGDYGRLGHGNTTSKKTPTLVHD--CQN-IASVSCGLNHTLALSRDGMTVWAFGDGDFGK 1605

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH--KWVSGVD 585
            LG G+T     P+ + AL++  +KS+ CG  ++  + ++   +V G D
Sbjct: 1606 LGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVCGQD 1653



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 149/293 (50%), Gaps = 26/293 (8%)

Query: 199  TGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 258
            TG+G  G   H  G+   + + S V  A++  +V  + +      H   +T+ GE+F+WG
Sbjct: 1440 TGEGSYGRLGH--GNSDDLSVPSLV-SALQGFIVTHLSSSVGSDGHTLAITESGELFTWG 1496

Query: 259  EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGL 318
            +   G+LGHG       P+L++ L    V    CG  HT  VT +G +YT+G    ++G 
Sbjct: 1497 DGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTATGYLYTFGYG--DYGR 1554

Query: 319  LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ-LFTFGDGTFGVLGHGDR 377
            LGHGN  S   P  ++   +  +++SVSCG  HT  ++  G  ++ FGDG FG LG G+ 
Sbjct: 1555 LGHGNTTSKKTPTLVH---DCQNIASVSCGLNHTLALSRDGMTVWAFGDGDFGKLGLGNT 1611

Query: 378  ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG-DGDRGRL 436
            ++V +P ++ +L+ +      CG  H  +V   +          +G ++  G D   G  
Sbjct: 1612 LAVQSPNKIAALENVGIKSVHCG--HQWSVFLAI----------NGDVYVCGQDAFNGIG 1659

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            G G     ++PT +  + +  F Q+SCG   T+AL   G+V++ G+   GQ+G
Sbjct: 1660 GPGQT---VIPTKLETINKRVF-QISCGAEYTLALDEDGNVWSWGNNSDGQVG 1708


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/325 (34%), Positives = 172/325 (52%), Gaps = 20/325 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS---- 206

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                    SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 207 --------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA 556
           +G GA G+LG G T +   PS V+ 
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 21/306 (6%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT--KGQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVSTPREVDSLKG 391
           + G L   H+  V+CG  H+  ++  GQLF++G G+ G LG      SV+ PR +  L  
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ 136

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCV 450
              ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P  V
Sbjct: 137 QTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQRV 184

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNF 509
            +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I CG 
Sbjct: 245 VY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 570 SFTAAI 575
             T A 
Sbjct: 304 QHTLAF 309



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVR-SLEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 15/218 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDA 281
           VP+ ++      +  ++CG  H   +   G+ F+WG+   G+LG G +    + P+ + +
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 186

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+ I +  VA G  H+ A++LSG ++ WG +N   G LG  +E     P  +   L    
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQK 243

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HTAV+T +G +FTFG G+ G LGH        PR V  L G    + ACG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
            HT A V            SSG ++ +G G RG+LG G
Sbjct: 304 QHTLAFVP-----------SSGLIYAFGCGARGQLGTG 330


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 173/348 (49%), Gaps = 29/348 (8%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           +++  A G RH+ L+   GE+ S+G+   G+LG         PK I AL+ + V+LV+CG
Sbjct: 24  ELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCG 83

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           + H+ AV   G ++ WG GS    G +G  NE++L +P+K+   L  I +  VSCG  H+
Sbjct: 84  KEHSLAVCYKGRVFAWGAGSEGQLG-IGEFNEINL-IPRKIKT-LTDIKIIQVSCGHHHS 140

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             ++  G+LFT+G  + G LG G    S ++P+ V  L G+   + A G  H+ A+    
Sbjct: 141 LALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFAL---- 196

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV----PTCVAALVEPNFCQVSCGHSL 467
                     SG  F WG    G+L    K   +V    P  V AL       +SCG+  
Sbjct: 197 --------SLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEH 248

Query: 468 TVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTS 525
           T  LT TG V+T G   YGQLG  P A  + P  VEG      V +I CG YH +A + +
Sbjct: 249 TAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYT 306

Query: 526 RTEVYTWGKG--ANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGT 569
             +V ++G+G        H +    NF  L+ A  L D +VK I  GT
Sbjct: 307 TGKVVSFGRGPCCKSSPTHPEAPTENFTCLISADDLVDFEVKHIFAGT 354



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 136/265 (51%), Gaps = 23/265 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDAL 282
           PK + +   L V  ++CG  H+  V  +G VF+WG    G+LG G  ++++  P+ I  L
Sbjct: 66  PKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTL 125

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
            +I +  V+CG HH+ A++  G ++TWG +  + G LG G E  S   P+++   L+GI 
Sbjct: 126 TDIKIIQVSCGHHHSLALSEDGRLFTWGSN--SHGQLGLGKECPSQASPQRVQF-LDGIP 182

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR----ISVSTPREVDSLKGLRTVRA 397
           ++ V+ G  H+  ++ +G  F +G  + G L    +    +  S P  VD+L+ L  V  
Sbjct: 183 LTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYI 242

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           +CG  HTA + +            +GK+FT+G    G+LG+     +  P  V   ++  
Sbjct: 243 SCGYEHTAVLTQ------------TGKVFTFGGNSYGQLGYSPTAGKEGPQLVEG-IDGL 289

Query: 458 FCQVSCGHSLTVA-LTTTGHVYTMG 481
             Q+ CG   T+A + TTG V + G
Sbjct: 290 VSQIDCGSYHTLAYVYTTGKVVSFG 314



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 118/247 (47%), Gaps = 26/247 (10%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ S G+L ++GD + G LG  D      P+ + +L+ LR    +
Sbjct: 22  GAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+  E  L+P  +  L +  
Sbjct: 82  CGKEHSLAV------------CYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIAC 515
             QVSCGH  ++AL+  G ++T GS  +GQLG  K   +   P RV+  L    + ++A 
Sbjct: 130 IIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQF-LDGIPLTQVAA 188

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL-------VEALKDKQVKSIVCG 568
           G  H   L+     + WG  + G+L       +N P +       V+AL++  V  I CG
Sbjct: 189 GGAHSFALSLSGASFGWGSNSEGQLA---LRKKNVPVVQSSKPCSVDALENLGVVYISCG 245

Query: 569 TSFTAAI 575
              TA +
Sbjct: 246 YEHTAVL 252



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 50/281 (17%)

Query: 164 DTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV 223
           +T RV L S     S    +      G VF WG    +G LG      G +  + +   +
Sbjct: 73  ETLRVDLVSCGKEHSLAVCYK-----GRVFAWG-AGSEGQLG-----IGEFNEINL---I 118

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDAL 282
           P+ +++   + +  ++CG  H+  +++ G +F+WG    G+LG G +    + P+ +  L
Sbjct: 119 PRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFL 178

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP------ 336
             I +  VA G  H+ A++LSG  + WG +          +E  L L KK N P      
Sbjct: 179 DGIPLTQVAAGGAHSFALSLSGASFGWGSN----------SEGQLALRKK-NVPVVQSSK 227

Query: 337 ------LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK 390
                 LE + V  +SCG  HTAV+T  G++FTFG  ++G LG+        P+ V+ + 
Sbjct: 228 PCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGID 287

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           GL + +  CG +HT A V            ++GK+ ++G G
Sbjct: 288 GLVS-QIDCGSYHTLAYVY-----------TTGKVVSFGRG 316



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 2/92 (2%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P +V++   L V  I+CG  H A++T+ G+VF++G    G+LG+   +    P+L++ + 
Sbjct: 228 PCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGID 287

Query: 284 NINVELVACGEHHTCA-VTLSGDMYTWGGSNC 314
            + V  + CG +HT A V  +G + ++G   C
Sbjct: 288 GL-VSQIDCGSYHTLAYVYTTGKVVSFGRGPC 318



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 37/67 (55%)

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           + + A G+ H  +L S  E++++G  ++G+LG  D   +  P  + AL+  +V  + CG 
Sbjct: 25  LRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGK 84

Query: 570 SFTAAIC 576
             + A+C
Sbjct: 85  EHSLAVC 91


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/340 (34%), Positives = 171/340 (50%), Gaps = 31/340 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+CG  H ALVT+ G++F +G    G+LG G  + V+ P  + ALK+  V+L ACG  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100

Query: 298 CAVTLSGDMYTWGGSN-CNFGLLGHGNEMSLWLPKKLN--GPLEGIHVSSVSCGPWHTAV 354
              T  G++Y  GG+N    GL    +  S  L +  N  GP     +  ++ G   +A 
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGP-----IKMLAAGSNTSAA 155

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           +T  G+L+ +GD + G +G G   +  TP+EV    G R    +CG +H+A V       
Sbjct: 156 LTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVT------ 207

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   G L+T+G+ D G+LG   ++     VP  V  + +    QV+CG   TVAL 
Sbjct: 208 ------VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVAL- 259

Query: 473 TTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
           T   VY+ G   +GQLG        +LP RV     K  V+  ACG+ H A++T    +Y
Sbjct: 260 TENEVYSFGLGQFGQLGHGTFIFESRLP-RVVEHFRKGRVKHAACGENHTALITDNGLLY 318

Query: 531 TWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           T+G G +G+LG G+ +  N   P+L     D  V S+ CG
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 143/301 (47%), Gaps = 27/301 (8%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           LKN     ++CG+ HT  VT +G ++ +G +  N+G LG G + ++  P  +   L+   
Sbjct: 33  LKNDVPLRISCGDEHTALVTENGKLFMFGSN--NWGQLGLGTKTTVNKPTCVKA-LKSER 89

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V   +CG  HT V TS G L+  G    G LG GD                RT       
Sbjct: 90  VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCND-------------RTSFHLVEF 136

Query: 402 WHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           ++    ++++   S++S      G+L+ WGD   G++G G +   L P  V+  V     
Sbjct: 137 FNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS--VGKRVF 194

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            VSCG+  +  +T  G +YT G    G+LG   +  AN K+P +V      + V ++ACG
Sbjct: 195 WVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTD--IPDRVVQVACG 252

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             H   LT   EVY++G G  G+LGHG    +   P +VE  +  +VK   CG + TA I
Sbjct: 253 GGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALI 311

Query: 576 C 576
            
Sbjct: 312 T 312



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 32/323 (9%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G K     P  V++     V+  ACG  H  + T +G +++ G    G+LG G  +D + 
Sbjct: 71  GTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTS 130

Query: 276 PKLIDAL-KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
             L++   K   ++++A G + + A+T  G +Y WG  + + G +G G E +   P++++
Sbjct: 131 FHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWG--DNSEGQIGLGKESNALTPQEVS 188

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--ISVSTPREVDSLKGL 392
               G  V  VSCG +H+A VT  G L+TFG+   G LG       +   P++V  +   
Sbjct: 189 V---GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD- 244

Query: 393 RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD--KEARLVPTCV 450
           R V+ ACG  HT A+ E              +++++G G  G+LGHG    E+RL P  V
Sbjct: 245 RVVQVACGGGHTVALTE-------------NEVYSFGLGQFGQLGHGTFIFESRL-PRVV 290

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF- 509
               +      +CG + T  +T  G +YT G   +G+LG  + N     + +  L   F 
Sbjct: 291 EHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEEN--FTNQFKPTLCPRFL 348

Query: 510 ---VEEIACGDYHVAVLTS-RTE 528
              V  + CG  H+ VL   RTE
Sbjct: 349 DYHVHSVTCGGCHMLVLAKPRTE 371



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 28/244 (11%)

Query: 139 ACGSVNS--LSSGGSDGRTG-HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIW 195
           ACG  N   L  G  + RT  HL         + + +A S++S     D     G +++W
Sbjct: 111 ACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQD-----GRLYMW 165

Query: 196 GECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF 255
           G+ + +G +G          G + ++  P+ V  +V   V  ++CG  H+A VT  G ++
Sbjct: 166 GDNS-EGQIG---------LGKESNALTPQEV--SVGKRVFWVSCGYYHSAFVTVDGALY 213

Query: 256 SWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           ++GE+  G+LG   +   +H  P+ +  + +  V+ VACG  HT A+T   ++Y++G   
Sbjct: 214 TFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHTVALT-ENEVYSFGLG- 270

Query: 314 CNFGLLGHGNEM-SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
             FG LGHG  +    LP+ +    +G  V   +CG  HTA++T  G L+TFGDG  G L
Sbjct: 271 -QFGQLGHGTFIFESRLPRVVEHFRKG-RVKHAACGENHTALITDNGLLYTFGDGRHGKL 328

Query: 373 GHGD 376
           G G+
Sbjct: 329 GLGE 332


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 179/367 (48%), Gaps = 28/367 (7%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           D+F WG  T  G LG GGI           +  +P+ ++     ++Q IACG  +  ++T
Sbjct: 27  DMFCWGS-TIHGELGLGGIEDE--------NILIPRELDFKKAAEIQQIACGENYTVVIT 77

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           + GE++S G    G+LGH  +      +LI  L     +  ACG +HT A+   G +++W
Sbjct: 78  QIGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G SN   G LG  ++  +    ++   L    V  ++CG  H   +T+ G+L+++G  + 
Sbjct: 136 G-SNTE-GQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSE 193

Query: 370 GVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG G  I     P+ + +  G+     ACG +H+ A+              SG +F W
Sbjct: 194 GQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAI------------SKSGAVFGW 241

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G    G+LG  D + R +P  +  L     C  +CG   +V LT  G V+T G+ +YGQL
Sbjct: 242 GKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 301

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G    + ++  R   +L  + V +I+CG  H +A++ SR  VY WG G  G+LG+  T  
Sbjct: 302 GHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRS 361

Query: 548 RNFPSLV 554
              P +V
Sbjct: 362 VTTPQVV 368



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 164/333 (49%), Gaps = 27/333 (8%)

Query: 250 KQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           K+ ++F WG  + G LG G   D ++  P+ +D  K   ++ +ACGE++T  +T  G++Y
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 308 TWGGSNCNFGLLGH--GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           + G  N ++G LGH  G +    +P      L+       +CG +HT  +   GQLF++G
Sbjct: 84  SCG--NNDYGQLGHEKGRKRLQLIPG-----LDAFVFKKAACGAYHTLAINEWGQLFSWG 136

Query: 366 DGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
             T G LG   +    S+PR V +L     V+ ACG+ H  A+             ++G+
Sbjct: 137 SNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALT------------NNGE 184

Query: 425 LFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           L++WG    G+LG G D +  + P  ++A +      ++CG   ++A++ +G V+  G  
Sbjct: 185 LYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKN 244

Query: 484 VYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            +GQLG +   +  LP +++  L    +   ACG+     LT    V+T G G  G+LGH
Sbjct: 245 TFGQLGLNDTQDRNLPCQLQ-TLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGH 303

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G   +   P  V  L    V  I CG   T A+
Sbjct: 304 GSNSNEILPRQVMELMGSTVTQISCGKRHTLAL 336


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 178/367 (48%), Gaps = 28/367 (7%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           D+F WG  T  G LG GGI              VP  V+     ++Q IACG  +  ++T
Sbjct: 48  DMFCWGN-TRHGELGLGGIEDE--------IILVPCEVDFKKASEIQQIACGENYTVVIT 98

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G+++S G    G+LGH  +      +LI  L     +  ACG +HT AV   G +++W
Sbjct: 99  HDGKIYSCGNNDYGQLGH--EQGRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSW 156

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G SN   G LG  ++  +    ++   L    +  ++CG  H   +T+ G+L+++G  + 
Sbjct: 157 G-SNSE-GQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSE 214

Query: 370 GVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG G  I     P+ +++L G+     ACG +H+ A+              SG +F W
Sbjct: 215 GQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAI------------SKSGAIFGW 262

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G    G+LG  D + R +P  +  L     C  +CG   +V LT  G V+T G+ +YGQL
Sbjct: 263 GKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQL 322

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G    N ++  R   +L  + V +I+CG  H +A++ S+  VY WG G  G+LG+  T  
Sbjct: 323 GHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRS 382

Query: 548 RNFPSLV 554
              P +V
Sbjct: 383 TTTPQVV 389



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 157/336 (46%), Gaps = 29/336 (8%)

Query: 248 VTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           + K+ ++F WG    G LG G   D  +  P  +D  K   ++ +ACGE++T  +T  G 
Sbjct: 43  LLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGK 102

Query: 306 MYTWGGSNCNFGLLGHGN---EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           +Y+ G  N ++G LGH      + L L       L+       +CG +HT  V   GQLF
Sbjct: 103 IYSCG--NNDYGQLGHEQGRKRLQLILG------LDAFVFKKAACGAYHTIAVNEWGQLF 154

Query: 363 TFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           ++G  + G LG   +     +PR V +L     V+ ACG+ H  A+             +
Sbjct: 155 SWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALT------------N 202

Query: 422 SGKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
           +G+L++WG    G+LG G D    + P  +  L       ++CG   ++A++ +G ++  
Sbjct: 203 NGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGW 262

Query: 481 GSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           G   +GQLG +   N  LP +++  L    V   ACG+     LT    V+T G G  G+
Sbjct: 263 GKNTFGQLGLNDTQNRNLPYQLQ-TLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQ 321

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LGHG  ++   P  V  L    V  I CG   T A+
Sbjct: 322 LGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLAL 357


>gi|313221384|emb|CBY32137.1| unnamed protein product [Oikopleura dioica]
          Length = 1586

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 117/344 (34%), Positives = 171/344 (49%), Gaps = 24/344 (6%)

Query: 234  DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC- 292
            ++Q I  G     L +  G V S GE   GRLGHG   D+S P L+ AL+   V  ++  
Sbjct: 764  NMQTIELGLNCTFLCSASGAVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSS 823

Query: 293  --GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
               + HT A+T SG+++TWG  + ++G LGHGN      P +L   L G  V    CG  
Sbjct: 824  VGSDGHTLAITESGELFTWG--DGDYGKLGHGNSERQRRP-RLVETLVGETVVDGCCGYK 880

Query: 351  HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            HTAVVT+ G L+TFG G +G LGHG+  S  TP  V   + +  V  +CG+ HT A+   
Sbjct: 881  HTAVVTATGYLYTFGYGDYGRLGHGNTTSKKTPTLVHDCQNI--VSVSCGLNHTLALSR- 937

Query: 411  MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                          ++ +GDGD G+LG G+  A   P  +AAL       V CGH  +V 
Sbjct: 938  ----------DGMTVWAFGDGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVF 987

Query: 471  LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
            L   G VY  G   +  +G P     +PT++E    K  V +I+CG  +   L     V+
Sbjct: 988  LAINGDVYVSGQDAFNGIGGP-GQTVIPTKLET--IKKRVFQISCGAEYTLALDEDGNVW 1044

Query: 531  TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            +WG  ++G++G G  +  + P L   L   ++K +  G + + A
Sbjct: 1045 SWGNNSDGQVGCGHFNKVHEPLL--TLTGHRIKQVRAGKTHSIA 1086



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 143/288 (49%), Gaps = 29/288 (10%)

Query: 307  YTWGGSNCNFGLLGHGNEM--SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            Y WGG     G LG    +     LP++L       ++ ++  G   T + +++G + + 
Sbjct: 733  YVWGG--VRHGQLGLNMNVGRHCALPRRLEA---FDNMQTIELGLNCTFLCSASGAVTST 787

Query: 365  GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW---HTAAVVEVMVGSSSSSNCS 421
            G+G++G LGHG+   +S P  V +L+G      +  V    HT A+ E            
Sbjct: 788  GEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITE------------ 835

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            SG+LFTWGDGD G+LGHG+ E +  P  V  LV        CG+  T  +T TG++YT G
Sbjct: 836  SGELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTATGYLYTFG 895

Query: 482  SPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSR-TEVYTWGKGANGR 539
               YG+LG       K PT V     +N V  ++CG  H   L+     V+ +G G  G+
Sbjct: 896  YGDYGRLGHGNTTSKKTPTLVHD--CQNIV-SVSCGLNHTLALSRDGMTVWAFGDGDFGK 952

Query: 540  LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH--KWVSGVD 585
            LG G+T     P+ + AL++  +KS+ CG  ++  + ++   +VSG D
Sbjct: 953  LGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVSGQD 1000


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 190/422 (45%), Gaps = 43/422 (10%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           +  WG  +   +  GGI         + D F+ K        +V+++ CG RH   V   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK--------NVRDVGCGNRHTGFVLDD 52

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G V++ G    G+LGH  D     P+ + AL    +  V+CGE HT A+   G +++WG 
Sbjct: 53  GTVYTCGCNDLGQLGH--DKSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGH 110

Query: 312 SNCNFGLLGHGN------EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +        HG       E  + +P+ +   L  I +  V+CG  H+  ++    ++++G
Sbjct: 111 A-------AHGQIGVSIAEDYIRVPRNIKS-LSDIQIVQVACGHHHSLALSKESNIYSWG 162

Query: 366 DGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
              +G LG G ++   S PR + SL G+     A G  H+ A+              SG 
Sbjct: 163 QNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALT------------ISGA 210

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           +F WG    G+LG  D+  R  P  + +L       + CG   T ALT  G V+T G+  
Sbjct: 211 IFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 485 YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHG 543
           YGQLG   A+ ++  R   +L  N V +IACG  H +A + S   +Y++G G NG+LG G
Sbjct: 271 YGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIG 330

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM-----CSGCRIPFNF 598
            T ++  PS+V+         +          C+ +  SG DQS         C  P +F
Sbjct: 331 STSNKKSPSMVKGNWLTHEDYVRRLPEANGCYCVKRIYSGGDQSFAHYFTIQNCLPPDDF 390

Query: 599 KR 600
           ++
Sbjct: 391 RK 392


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 223/468 (47%), Gaps = 52/468 (11%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWGGS 312
           V  WG    G+ G   +     P L+D L++++ +  V+CG +++ A+T SGD+  WG  
Sbjct: 10  VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
            C  G LG GN     +P+ +N  L+  +V  V+C   HTA + S G+L+T+G    G L
Sbjct: 70  GC--GQLGFGNLEDCLVPR-VNLSLK--NVVQVACSDRHTAAILSNGELYTWGCSKNGKL 124

Query: 373 GHGD---RIS---VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           GHG     IS   VS P +V +L+G + ++ +CG +HT  + +              K  
Sbjct: 125 GHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTD------------DKKAL 172

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           TWG G +GRLGHGD +    P  + +L      ++SCG   T  L  TG +Y  G   +G
Sbjct: 173 TWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232

Query: 487 QLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH--- 542
           +LG    +  L P  +EG L    + +++ G  H A +T   +VYTWG+G  GRLGH   
Sbjct: 233 KLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHIFN 290

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSGCR-IPFN 597
           G   D   P  +  L+   +  I CG S + A+     ++ W  G+ +++  G + I  N
Sbjct: 291 GPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTW--GMTKNIGHGIQGIHPN 348

Query: 598 FKRKRHNCYNCGLVYCHTCSSKKSVKAS-------MAPNPNKPYRVC-DNCFGKLTKATE 649
              K     N  +V    CSS  S+  S        +P   KP  +  D    K  ++ E
Sbjct: 349 MPSKHPILQNKNIVQV-VCSSSHSIALSDIGALVQKSPETWKPQSLAEDQEPKKADQSIE 407

Query: 650 TSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVE 697
              +   ++ RR  + QG  + ++ G +   R  +++   M+ L+K E
Sbjct: 408 EFKTGLDSLIRRKIL-QGIKDKLKTGGD---REKIEY--LMDELEKSE 449



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 168/348 (48%), Gaps = 46/348 (13%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GD+ +WG   G G LG          G   D  VP+   S  + +V  +AC  RH A + 
Sbjct: 61  GDLILWGY-GGCGQLG---------FGNLEDCLVPRVNLS--LKNVVQVACSDRHTAAIL 108

Query: 250 KQGEVFSWGEELGGRLGHG------VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
             GE+++WG    G+LGHG       ++ VS P  + AL+   V  V+CG +HT  +T  
Sbjct: 109 SNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDD 168

Query: 304 GDMYTWGGSNCNFGL---LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
               TWG      GL   LGHG+   ++ PK +   L G+ +  +SCG  HTA++   G+
Sbjct: 169 KKALTWG-----LGLQGRLGHGDTQDIFTPKLIE-SLAGLPIKEISCGGHHTAILLVTGK 222

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
           L+ FG G FG LG G    V  PR ++  L+ ++  + + G  H+AAV +          
Sbjct: 223 LYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKC--------- 273

Query: 420 CSSGKLFTWGDGDRGRLGH---GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
              GK++TWG G  GRLGH   G +   L P  ++ L +     +SCG+S +VAL+  G 
Sbjct: 274 ---GKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGD 328

Query: 477 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
           +YT G       G    +  +P++      KN V ++ C   H   L+
Sbjct: 329 IYTWGMTKNIGHGIQGIHPNMPSKHPILQNKNIV-QVVCSSSHSIALS 375



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 148/290 (51%), Gaps = 26/290 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+++ WG C+ +G LG G         V       KA+E   V+ V   +CG  H   +T
Sbjct: 111 GELYTWG-CSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQV---SCGSYHTGCLT 166

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              +  +WG  L GRLGHG   D+  PKLI++L  + ++ ++CG HHT  + ++G +Y +
Sbjct: 167 DDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMF 226

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           GG    FG LG G+   + +P+ L GPLE I ++ VS G  H+A VT  G+++T+G G  
Sbjct: 227 GGG--AFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG-- 282

Query: 370 GVLGH---GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G LGH   G      +P+ + +L+    V  +CG  H+ A+ +V            G ++
Sbjct: 283 GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDV------------GDIY 330

Query: 427 TWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
           TWG      +GHG +     +P+    L   N  QV C  S ++AL+  G
Sbjct: 331 TWGMTK--NIGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSHSIALSDIG 378


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 172/376 (45%), Gaps = 35/376 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V  ++CG  H+  +   G V SWG    G+LGHG     + P  I AL +  V+ V CG 
Sbjct: 12  VLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGA 71

Query: 295 HHTCAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            +T AV  S G +Y+WG    +FG LGHG    +++P+ +     G  V+ V+CG  HT 
Sbjct: 72  EYTVAVASSRGQIYSWGWG--DFGRLGHGECGDVFVPRPI-AFFSGRPVARVACGDTHTL 128

Query: 354 VVTSA-GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           VVT   G L+TFG    G LG G      +P+ V +L+G R    ACG  H+ A  E   
Sbjct: 129 VVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATE--- 185

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                    +G +F+WG G  G LG GD + R  PT V  L       V CG   +  +T
Sbjct: 186 ---------AGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVT 236

Query: 473 TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
             G V+T G   YGQLG     +   P  V G L    V  +A G  H     S   +Y 
Sbjct: 237 DEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAG-LQHCRVSTVAGGWRHTMAADSEGNLYA 295

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEALKD------------KQVKSIVCGTSFTAAIC--- 576
           WG    G+LG GD++DR  P+ V                 ++V  + CG   T A+    
Sbjct: 296 WGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAG 355

Query: 577 -LHKWVSGVDQSMCSG 591
            ++ W  GV+  +  G
Sbjct: 356 EVYSWGRGVNGQLGHG 371



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 162/339 (47%), Gaps = 31/339 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRH-AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           P  + +     V  + CG  +  A+ + +G+++SWG    GRLGHG   DV  P+ I   
Sbjct: 53  PTCIAALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFF 112

Query: 283 KNINVELVACGEHHTCAVTLS-GDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
               V  VACG+ HT  VT   G +YT+G   N   GL GH N+    L  +L   L+G 
Sbjct: 113 SGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGL-GHTNDC---LSPQLVTALQGE 168

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            VSSV+CG  H+   T AG +F++G G +G LG GD     TP  V  L G+      CG
Sbjct: 169 RVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCG 228

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             H+A V +             G++FT+G    G+LGHGD      P  VA L       
Sbjct: 229 WRHSAVVTD------------EGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVST 276

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEG-----------KLTKN 508
           V+ G   T+A  + G++Y  G   +GQLG   +  +  PT V G             T  
Sbjct: 277 VAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPR 336

Query: 509 FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            V  +ACG  H   +T   EVY+WG+G NG+LGHG   D
Sbjct: 337 RVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQD 375



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/283 (36%), Positives = 142/283 (50%), Gaps = 28/283 (9%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTK-QGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           D FVP+ +       V  +ACG  H  +VT+  G ++++G    G+LG G  +D   P+L
Sbjct: 102 DVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQL 161

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           + AL+   V  VACG  H+ A T +G +++WG     +G LG G+    + P ++ G L+
Sbjct: 162 VTALQGERVSSVACGSEHSLAATEAGTVFSWGWGR--YGNLGDGDSQDRYTPTRVVG-LD 218

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G+ V+SV CG  H+AVVT  G++FTFG   +G LGHGD +  + P  V  L+  R    A
Sbjct: 219 GVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVA 278

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP-- 456
            G  HT A              S G L+ WG    G+LG GD E R  PT VA       
Sbjct: 279 GGWRHTMAAD------------SEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGG 326

Query: 457 ----------NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
                         ++CG   TVA+T  G VY+ G  V GQLG
Sbjct: 327 GVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLG 369



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 86/171 (50%), Gaps = 13/171 (7%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   D + P  V     + V ++ CG RH+A+VT +G VF++G    G+LGHG   D + 
Sbjct: 203 GDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTR 262

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P L+  L++  V  VA G  HT A    G++Y WG +   FG LG G+      P  + G
Sbjct: 263 PCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWN--KFGQLGLGDSEDRAAPTPVAG 320

Query: 336 PLEGI-----------HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
                            V+ ++CG  HT  VT AG+++++G G  G LGHG
Sbjct: 321 FGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHG 371



 Score = 46.2 bits (108), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 27/39 (69%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
           V  +ACG RH   VT+ GEV+SWG  + G+LGHG + D+
Sbjct: 338 VALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQDL 376


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 172/325 (52%), Gaps = 22/325 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPWHT 352
            H+ A++  G +++WG GS+   GL+   + +++  L +KLN       +  VSCG WH 
Sbjct: 94  SHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQT----ILQVSCGNWHC 149

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             + + GQ FT+G  + G LG G    S ++P+ V SL+G+   +   G           
Sbjct: 150 LALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAG----------- 198

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
            G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  L
Sbjct: 199 -GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVY 530
           T +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVE 555
            +G GA G+LG G T +   PS V+
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGRNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV  G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ QG++FSWG    G+LG   ++  V+ P+LI  L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGRN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V  G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTE 528
             + V++I  G     VL S+ E
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYE 382


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 196/405 (48%), Gaps = 29/405 (7%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +++ WG  +   +  GGI        +   S +P   +SAV      IACG RH   +T 
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQ----ILTPSRIPWKPDSAV----NQIACGHRHTLFLTA 53

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            G+V++ G     +LGH + +    P  I  L++  +  +ACG  H+ A++  G +++WG
Sbjct: 54  SGKVYACGSNDYSQLGHELPT--KRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWG 111

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            + C  G LGH ++  +    K+   L    V  ++CG  H+  +T  G+L+++G   +G
Sbjct: 112 DNEC--GQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYG 169

Query: 371 VLG---HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            LG     D    +TP  + +L G+     ACG            G+ S     S  +F 
Sbjct: 170 QLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACG------------GNHSFLISKSSAVFG 217

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG  + G+LG  D+  R  PT +  L       V+CG   +V LT  G V+T G+  YGQ
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQ 277

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG   ++ ++  R+  +L  + + ++ACG+ H +A++ SR  +Y +G G++G+LG  +T 
Sbjct: 278 LGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTK 337

Query: 547 DRNFPSLVEA-LKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCS 590
             N P LV          +++       A  +H+  SG DQS+ +
Sbjct: 338 SLNLPQLVIGPWVSPSGSTLLQSNDAKIASVIHQIFSGGDQSIVT 382


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/325 (34%), Positives = 172/325 (52%), Gaps = 20/325 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS---- 206

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                    SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 207 --------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEA 556
           +G GA G+LG G T +   PS V+ 
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 21/306 (6%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT--KGQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVSTPREVDSLKG 391
           + G L   H+  V+CG  H+  ++  GQLF++G G+ G LG      SV+ PR +  L  
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ 136

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCV 450
              ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P  V
Sbjct: 137 QTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQRV 184

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNF 509
            +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I CG 
Sbjct: 245 VY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 570 SFTAAI 575
             T A 
Sbjct: 304 QHTLAF 309



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 140/284 (49%), Gaps = 19/284 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVR-SLEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            SG +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEG 503
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 24/251 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F WG  + DG LG            +    VP+ ++      +  ++CG  H   + 
Sbjct: 103 GQLFSWGAGS-DGQLG--------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
             G+ F+WG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +N   G LG  +E     P  +   L    V  +SCG  HTAV+T +G +FTFG G+
Sbjct: 214 WGMNNA--GQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G LGH        PR V  L G    + ACG  HT A V            SSG ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 429 GDGDRGRLGHG 439
           G G RG+LG G
Sbjct: 320 GCGARGQLGTG 330


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/324 (33%), Positives = 170/324 (52%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL+    E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   +   G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
             G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 389
           + G L   H+  V+CG  H+  ++  GQLF++G   DG  G++   D  SV+ PR +  L
Sbjct: 78  I-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTED--SVAVPRLIQKL 134

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPT 448
                ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P 
Sbjct: 135 NQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTK 507
            V +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+
Sbjct: 183 RVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I C
Sbjct: 243 KVVY-ISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 568 GTSFTAAI 575
           G   T A 
Sbjct: 302 GRQHTLAF 309



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 154/326 (47%), Gaps = 33/326 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            +G +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------NGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYT 531
             + V++I  G     VL S+ E Y+
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYENYS 385



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +  GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVTAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T +G ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 178/350 (50%), Gaps = 32/350 (9%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLIDALKNINVELVAC 292
           +++  A G RH+ L+   GE+ S G+   G+LG  GV  D  HPK I  L N+ V+LV+C
Sbjct: 24  ELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRD-EHPKRIRTLDNLRVDLVSC 82

Query: 293 GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           G+ H+ AV   G ++ WG GS    G +G   E++L +P K+   L GI +  VSCG +H
Sbjct: 83  GKEHSLAVCYKGRVFAWGAGSEGQLG-VGEFKEINL-IPTKIKT-LTGIKIIQVSCGHYH 139

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +  ++  GQ+F++G  + G LG G    S ++P+ V SL G+   + A G  H+ A+   
Sbjct: 140 SLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFAL--- 196

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSL 467
                      SG  F WG  + G+L        +    P  + AL       +SCG+  
Sbjct: 197 ---------SLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEH 247

Query: 468 TVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTS 525
           T  LT TG V+T G   YGQLG  P A  + P  VEG      V +I CG YH +A + +
Sbjct: 248 TAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYT 305

Query: 526 RTEVYTWGKGANGRLG----HGDTDDRNFPSLVEA--LKDKQVKSIVCGT 569
             +V ++G+G + +         T++ +F S + A  L D QVK I  GT
Sbjct: 306 TGKVVSFGRGPSCKSSPTHPKALTENVDFTSPISANDLVDFQVKHIFAGT 355



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 143/298 (47%), Gaps = 33/298 (11%)

Query: 139 ACGSVNSLSSGGSDG--RTGHLKGL-SGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIW 195
           +CG  NS    G  G  R  H K + + D  RV L S     S    +      G VF W
Sbjct: 46  SCGD-NSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCGKEHSLAVCYK-----GRVFAW 99

Query: 196 GECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF 255
           G    +G LG G          K  + +P  +++   + +  ++CG  H+  +++ G+VF
Sbjct: 100 G-AGSEGQLGVG--------EFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVF 150

Query: 256 SWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 314
           SWG    G+LG G +    + P+ + +L  I +  VA G  H+ A++LSG  + WG +N 
Sbjct: 151 SWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNA 210

Query: 315 -NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
               L  +   +    P+ + G L+ + V  +SCG  HTAV+T  G++FTFG  ++G LG
Sbjct: 211 GQLALRQNNVPVQSHKPRSI-GALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLG 269

Query: 374 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           H        P+ V+ + GL + +  CG +HT A V            ++GK+ ++G G
Sbjct: 270 HSPTAEKEGPQLVEGIDGLVS-QIDCGSYHTLAYVY-----------TTGKVVSFGRG 315



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 115/252 (45%), Gaps = 19/252 (7%)

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P++      G  +   + G  H+ ++ S G+L + GD + G LG         P+ + +L
Sbjct: 13  PRRRQAGXAGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTL 72

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPT 448
             LR    +CG  H+ AV            C  G++F WG G  G+LG G+ KE  L+PT
Sbjct: 73  DNLRVDLVSCGKEHSLAV------------CYKGRVFAWGAGSEGQLGVGEFKEINLIPT 120

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLT 506
            +  L      QVSCGH  ++AL+  G V++ GS  +GQLG  K   +   P RV   L 
Sbjct: 121 KIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRS-LD 179

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD---DRNFPSLVEALKDKQVK 563
              + ++A G  H   L+     + WG    G+L     +     + P  + ALK+  V 
Sbjct: 180 GIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVI 239

Query: 564 SIVCGTSFTAAI 575
            I CG   TA +
Sbjct: 240 YISCGYEHTAVL 251



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 7/117 (5%)

Query: 204 LGGGIHRSGSYA----GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
            G G + +G  A     V + S  P+++ +   L V  I+CG  H A++T+ G+VF++G 
Sbjct: 203 FGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGG 262

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG-GSNC 314
              G+LGH   ++   P+L++ +  + V  + CG +HT A V  +G + ++G G +C
Sbjct: 263 NSYGQLGHSPTAEKEGPQLVEGIDGL-VSQIDCGSYHTLAYVYTTGKVVSFGRGPSC 318


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 166/324 (51%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+++ CG RH A + + G V++ G    G+LGH  +     P+ + AL    +  ++CGE
Sbjct: 36  VRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQIIVALSCGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT A+   G +++WG GS+   GL  +  E  + +P+ +   L  + V+ V+CG WH+ 
Sbjct: 94  SHTLALNDKGQVFSWGLGSDGQLGL--NNFEECIRVPRNIKS-LSDVQVAQVACGYWHSL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            ++  G +F++G   +G LG G    S+S P+ + SL+G+   + A G  H+ A+     
Sbjct: 151 ALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALT---- 206

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                    SG +F WG    G+LG  D   R  P  + AL       +SCG   T ALT
Sbjct: 207 --------LSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT-SRTEVYT 531
             G V+T G+  YGQLG    N ++  R   +L  N V +IACG  H    T S  ++ +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDS 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G G NG+LG   T +R  P+ V+
Sbjct: 319 FGLGGNGQLGTRSTCNRKSPAPVK 342



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 153/327 (46%), Gaps = 23/327 (7%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  +      V  V CG  HT  +   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
             CN  G LGH  E S   P+++   L+   + ++SCG  HT  +   GQ+F++G G+ G
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQIIVALSCGESHTLALNDKGQVFSWGLGSDG 114

Query: 371 VLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG  +    +  PR + SL  ++  + ACG WH+ A+               G +F+WG
Sbjct: 115 QLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLAL------------SKGGHIFSWG 162

Query: 430 DGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
               G+LG G     + VP  + +L    F Q++ G + + ALT +G V+  G   +GQL
Sbjct: 163 QNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQL 222

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
           G    N +    +   L    V  I+CG+ H A LT    V+T+G G  G+LGH  T+  
Sbjct: 223 GLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
             P  V  L    V  I CG   T A 
Sbjct: 283 VNPRKVFELMGNVVTQIACGRQHTLAF 309



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 139/293 (47%), Gaps = 36/293 (12%)

Query: 153 GRTGHLKGLSGDTFRVSL-SSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G VF WG    DG LG     
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWG-LGSDGQLG----- 117

Query: 211 SGSYAGVKMDSF-----VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 265
                   +++F     VP+ ++S   + V  +ACG  H+  ++K G +FSWG+   G+L
Sbjct: 118 --------LNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQL 169

Query: 266 GHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 324
           G G+    +S P+ + +L+ I    +A G  H+ A+TLSG ++ WG +   FG LG  + 
Sbjct: 170 GLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRN--KFGQLGLNDT 227

Query: 325 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 384
                P  L   L    V  +SCG  HTA +T  G +FTFG G +G LGH        PR
Sbjct: 228 NDRCFPALLKA-LRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 286

Query: 385 EVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG 437
           +V  L G    + ACG  HT A              SSGK+ ++G G  G+LG
Sbjct: 287 KVFELMGNVVTQIACGRQHTLAFTP-----------SSGKMDSFGLGGNGQLG 328


>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
 gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
          Length = 516

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 175/352 (49%), Gaps = 37/352 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ I+CG  H ALV K G VF +G+   G+LG G    V+ P  + +LK      VACG+
Sbjct: 38  VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGK 97

Query: 295 HHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHT 352
            HT   T    ++ +G   CN  G LG G+    W+P+ ++  LE   ++ ++S G  H+
Sbjct: 98  SHTLISTECNKIFAFG---CNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHS 154

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           A +T  G ++ +GD + G  G  +   +  PR+++    + ++  +CG +HTA +     
Sbjct: 155 AFLTEEGSVYIWGDNSDGQCGIKNENYLLNPRKIEFQNPINSI--SCGYYHTAFI----- 207

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   S GK++T+G+ D G+LG  DK    VP  V   ++ N   V CG S T+ LT
Sbjct: 208 --------SLGKVYTFGEDDNGKLGRSDKLPNDVPEGVE--LDENCISVKCGGSHTIILT 257

Query: 473 TTGHVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEE------IACGDYHVAVLT 524
            +G  Y  GS   GQ  LG+ +    +P RV      NF +E      + CG+ H A LT
Sbjct: 258 ESGKAYAFGSNFSGQLGLGNFETEFSIPQRV------NFTDENVNLIYVTCGESHSAFLT 311

Query: 525 SRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              ++YT G G NG+L + D + +   P+ +E  K      + CG   T  +
Sbjct: 312 DEGKLYTCGDGRNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVL 363



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 146/308 (47%), Gaps = 31/308 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI--DA 281
           P  ++S       ++ACG  H  + T+  ++F++G    G+LG G   D   P++I  D 
Sbjct: 79  PSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDL 138

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL--NGPLEG 339
            K  N+  ++ G HH+  +T  G +Y WG +  + G  G  NE  L  P+K+    P   
Sbjct: 139 EKTNNIIALSAGCHHSAFLTEEGSVYIWGDN--SDGQCGIKNENYLLNPRKIEFQNP--- 193

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
             ++S+SCG +HTA + S G+++TFG+   G LG  D++    P  V+  +   +V+  C
Sbjct: 194 --INSISCGYYHTAFI-SLGKVYTFGEDDNGKLGRSDKLPNDVPEGVELDENCISVK--C 248

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEP-N 457
           G  HT  + E            SGK + +G    G+LG G+ E    +P  V    E  N
Sbjct: 249 GGSHTIILTE------------SGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVN 296

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQL--GDPKANGKLPTRVEGKLTKNFVEEIAC 515
              V+CG S +  LT  G +YT G    G+L   D   N   PT +E      F   ++C
Sbjct: 297 LIYVTCGESHSAFLTDEGKLYTCGDGRNGKLCNEDESTNICTPTTIE-MFKSFFCTYVSC 355

Query: 516 GDYHVAVL 523
           G  H  VL
Sbjct: 356 GGCHTMVL 363



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 29/229 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV--PKAVESAVVLDVQNIACGGRHAAL 247
           G V+IWG+             S    G+K ++++  P+ +E      + +I+CG  H A 
Sbjct: 161 GSVYIWGD------------NSDGQCGIKNENYLLNPRKIEFQN--PINSISCGYYHTAF 206

Query: 248 VTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           ++  G+V+++GE+  G+LG    + +DV     +D     N   V CG  HT  +T SG 
Sbjct: 207 IS-LGKVYTFGEDDNGKLGRSDKLPNDVPEGVELDE----NCISVKCGGSHTIILTESGK 261

Query: 306 MYTWGGSNCNF-GLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            Y +G    NF G LG GN E    +P+++N   E +++  V+CG  H+A +T  G+L+T
Sbjct: 262 AYAFGS---NFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYT 318

Query: 364 FGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            GDG  G L + D   ++ TP  ++  K       +CG  HT  + + +
Sbjct: 319 CGDGRNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVLAKAL 367



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 20/199 (10%)

Query: 167 RVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKA 226
           ++   + ++S S G  H    SLG V+ +GE   +G LG    RS      K+ + VP+ 
Sbjct: 187 KIEFQNPINSISCGYYHTAFISLGKVYTFGE-DDNGKLG----RSD-----KLPNDVPEG 236

Query: 227 VESAVVLDVQNIA--CGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDAL- 282
           VE    LD   I+  CGG H  ++T+ G+ +++G    G+LG G  +++ S P+ ++   
Sbjct: 237 VE----LDENCISVKCGGSHTIILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTD 292

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +N+N+  V CGE H+  +T  G +YT G    N  L       ++  P  +    +    
Sbjct: 293 ENVNLIYVTCGESHSAFLTDEGKLYTCGDGR-NGKLCNEDESTNICTPTTIE-MFKSFFC 350

Query: 343 SSVSCGPWHTAVVTSAGQL 361
           + VSCG  HT V+  A +L
Sbjct: 351 TYVSCGGCHTMVLAKALKL 369


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 188/398 (47%), Gaps = 41/398 (10%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVK--MDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           VF WG  T  G LG   H S    G++   +   P+ +E+    ++  +  G  H+A + 
Sbjct: 7   VFTWGTGT-QGQLG---HGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAID 62

Query: 250 KQGEVFSWGEELGGRLGHGV-DSDV-SHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           K+G++++WG     +LGHG  + D+ S P+++DAL+ I +  ++CGE+HT AV   G ++
Sbjct: 63  KEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLF 122

Query: 308 TWGGSNCNF---GLLGHGNEMSLWLPKKLNGPL-EGIHVSSVSCGPWHTAVVTSAGQLFT 363
           TWG         G LGH       +P+ +   + +G+ V SV CG  HT  +T  G+++ 
Sbjct: 123 TWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWA 182

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           +G+G +G LG+G   +   P  V+          + G   T A+ E             G
Sbjct: 183 WGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITE------------HG 230

Query: 424 KLFTWGDGDRGRLGHGD------KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
           ++++WG     +LG G            +P  V AL   N  QVS G+    A+T  G +
Sbjct: 231 EVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKM 290

Query: 478 YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
           +  G+ ++           L       L    +  + CG Y+ A L++   ++T+GKG +
Sbjct: 291 FMWGAKLW-----------LEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHS 339

Query: 538 GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             LGHG+   +  P LVE+L    V S+ CG S   A+
Sbjct: 340 NCLGHGERKTQLQPLLVESLNRYNVVSMTCGYSHMGAL 377



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 45/297 (15%)

Query: 187 DSLGDVFIWG----ECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV--LDVQNIAC 240
           D  G +F WG       G G LG   H  G       D  +P+ V + V   + V+++ C
Sbjct: 116 DEEGKLFTWGWGGSTMKGSGALG---HAGGE------DESIPRLVRTLVDQGVPVKSVEC 166

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           G  H   +TK GE+++WG    GRLG+G   +   P+ ++   + N+  ++ G   T A+
Sbjct: 167 GELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAI 226

Query: 301 TLSGDMYTWG-GSNCNFGLLGHGNEMSLW----LPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           T  G++Y+WG  S+   G LG G  +  +    +P  +   L  ++V+ VS G  H A V
Sbjct: 227 TEHGEVYSWGINSHSQLG-LGGGLTVDYYNMETIPVVVE-ALSNVNVAQVSAGYDHAAAV 284

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           T+ G++F +G   +             P E+  LK    +   CG ++TAA+        
Sbjct: 285 TNDGKMFMWGAKLW-----------LEPHEMTILKDETIISVQCGRYYTAAL-------- 325

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                +SG LFT+G G    LGHG+++ +L P  V +L   N   ++CG+S   ALT
Sbjct: 326 ----SASGNLFTFGKGHSNCLGHGERKTQLQPLLVESLNRYNVVSMTCGYSHMGALT 378



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 113/235 (48%), Gaps = 29/235 (12%)

Query: 361 LFTFGDGTFGVLGHGD------RISVS--TPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           +FT+G GT G LGHG       R S    +PR +++ +G    +   G  H+AA+ +   
Sbjct: 7   VFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDK--- 63

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                     GKL+TWG  +  +LGHG  +++ + +P  V AL       +SCG   T A
Sbjct: 64  ---------EGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGA 114

Query: 471 LTTTGHVYTMG---SPVYGQLGDPKANGK---LPTRVEGKLTKNF-VEEIACGDYHVAVL 523
           +   G ++T G   S + G      A G+   +P  V   + +   V+ + CG+ H   L
Sbjct: 115 VDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVAL 174

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
           T   E++ WG G  GRLG+G +D+   P  VE   D+ + SI  G  FT AI  H
Sbjct: 175 TKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEH 229



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 99/199 (49%), Gaps = 25/199 (12%)

Query: 220 DSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG----EELGGRLGHGVDSDVS 274
           D+F VP+ VE     ++ +I+ G      +T+ GEV+SWG     +LG  LG G+  D  
Sbjct: 197 DNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHSQLG--LGGGLTVDYY 254

Query: 275 H----PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP 330
           +    P +++AL N+NV  V+ G  H  AVT  G M+ WG                LWL 
Sbjct: 255 NMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWGAK--------------LWLE 300

Query: 331 KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK 390
                 L+   + SV CG ++TA ++++G LFTFG G    LGHG+R +   P  V+SL 
Sbjct: 301 PHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQPLLVESLN 360

Query: 391 GLRTVRAACGVWHTAAVVE 409
               V   CG  H  A+ +
Sbjct: 361 RYNVVSMTCGYSHMGALTK 379


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 180/397 (45%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  ++
Sbjct: 56  YTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G E  + +P+ +   L  I +  V+CG +H+  ++   ++F++G   +G LG
Sbjct: 114 GQLGL--PGTEECVRVPRNIRS-LSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLG 170

Query: 374 HGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G      T P+ + SL G+   + A G            G+ S     SG +F WG   
Sbjct: 171 LGYEYKKQTSPQMIKSLLGIPFAQIAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D   R VPT + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +I CG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+             T      C+ +  SG DQS 
Sbjct: 339 FTVKGSWIPFSPQCPMSTDSEECYCVKRIFSGGDQSF 375



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 129/262 (49%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG  T DG LG      G+   V+    VP+ + S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWGLAT-DGQLG----LPGTEECVR----VPRNIRSLSEIQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVFSWG+   G+LG G +    + P++I +L  I    +A G  H+  +TLSG ++ 
Sbjct: 154 KGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  ++   ++P  L   L    V  + CG  HTA +T  G +FTFG G 
Sbjct: 214 WGRNK--FGQLGLNDDNDRYVPTLLKS-LRSQKVVHICCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    +  CG  HT A V            SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVP-----------SSGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGTGTTSNRKSPFTV 341



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 132/275 (48%), Gaps = 23/275 (8%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  L    V  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFLNK-RVRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    +   P  V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--ARKRPEHVGALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L E    QV+CG+  ++AL+    V++ G 
Sbjct: 104 QVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQ 163

Query: 483 PVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
             YGQLG      K   P  ++  L   F + IA G  H  VLT    ++ WG+   G+L
Sbjct: 164 NKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G  D +DR  P+L+++L+ ++V  I CG   TAA+
Sbjct: 223 GLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAAL 257


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 171/351 (48%), Gaps = 33/351 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+  ++   L ++ I C  R   ++T+ G+VF               SD   P+ + AL 
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF----------MYYSSDTQCPQEMTALD 511

Query: 284 NINVELVAC---GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
           +  V  +A    G+H+  A+T   ++Y+WG  N + G LGHG+  +   P  +   L+G 
Sbjct: 512 DKEVIKIAAHPEGKHYL-ALTKDYEVYSWG--NGDGGRLGHGDTSTKEEPTLIQA-LKGK 567

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            +  V CG  ++A +++ G L+T+G G +G LGHG      TP  + +L     ++ ACG
Sbjct: 568 DIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACG 627

Query: 401 VW--HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            +  HT  +             S GK+++WGDGD G+LG G  +   +P  +  L     
Sbjct: 628 SFYAHTLCIT------------SQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKI 675

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFVEEIACGD 517
            QV CG   +VAL+  GHVYT G     +LG P + N + P  VE  L    V  ++ G 
Sbjct: 676 VQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVE-VLRDRKVVGVSLGV 734

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
            HV  LT + EVY WGK  N ++          P L+EALK ++V  + CG
Sbjct: 735 SHVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCG 785



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 167/348 (47%), Gaps = 49/348 (14%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD---MYTWG 310
           VF WG       G G       P+  D L  + ++ + C +     +T +G    MY   
Sbjct: 448 VFGWGW-FSWIFGVG-------PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSS 499

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGT 368
            + C               P+++   L+   V  ++  P   H   +T   +++++G+G 
Sbjct: 500 DTQC---------------PQEMTA-LDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGD 543

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G LGHGD  +   P  + +LKG   +   CG            G+ S++  ++G L+TW
Sbjct: 544 GGRLGHGDTSTKEEPTLIQALKGKDIIDVECG------------GTYSAAISANGALYTW 591

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYG 486
           G G+ GRLGHG  E  L PT ++AL + +  +V+CG  ++ T+ +T+ G VY+ G   YG
Sbjct: 592 GRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYG 651

Query: 487 QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           +LG   ++G KLP  +E KL    + ++ CG      L+    VYTWGKG   +LGH   
Sbjct: 652 KLGRGGSDGSKLPRLIE-KLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTE 710

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMC 589
           ++  FP +VE L+D++V  +  G S   A+     ++ W    ++ +C
Sbjct: 711 ENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQIC 758



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  +++    D+ ++ CGG ++A ++  G +++WG    GRLGHG   D   P +I AL 
Sbjct: 558 PTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALS 617

Query: 284 NINVELVACGEH--HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           + ++  VACG    HT  +T  G +Y+WG  + ++G LG G      LP+ +   L+ + 
Sbjct: 618 DEHIIKVACGSFYAHTLCITSQGKVYSWG--DGDYGKLGRGGSDGSKLPRLIE-KLQNVK 674

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           +  V CG   +  ++  G ++T+G G    LGH    +V  P  V+ L+  + V  + GV
Sbjct: 675 IVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGV 734

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            H  A+ +             G+++ WG  +  ++    +     P  + AL       V
Sbjct: 735 SHVLALTD------------QGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGV 782

Query: 462 SCGHSLTVALT 472
            CG + + A T
Sbjct: 783 CCGPAQSFAWT 793


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 178/386 (46%), Gaps = 50/386 (12%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-------------- 269
           PK V  A    +  +ACGG H   +T  G+V+S+G+    ++                  
Sbjct: 468 PKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNEST 527

Query: 270 ----DSDVSHPKLID------ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLL 319
                S    P L++      AL    + +VACG  H+ A+T +G++YTWG      G L
Sbjct: 528 RVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGED--GRL 585

Query: 320 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           GHG+     +P+K+   L    V S SCG  HTAV+T+ G +FTFG G  G LG GD   
Sbjct: 586 GHGDMRDRAVPRKVMSLLRE-SVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKW 644

Query: 380 VSTPREVDSL-KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR--L 436
             TP  +    +G       CG W+  A ++             G +FTWG    G+  L
Sbjct: 645 RDTPHPIVGFPQGTSISLVVCG-WNFTAALD-----------RQGSVFTWGKTGEGQCGL 692

Query: 437 GHGDKEARLVPTCVAALVE---PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA 493
           G+ D++ ++VP CV  L +    +   V+CG++ TV LT +G +Y+ G   YGQLG    
Sbjct: 693 GYVDRD-QVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTGDV 751

Query: 494 NGKLPTRVE----GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
              LP RV+         + +  + CG +H    T +  ++ WG  + G  G G T +++
Sbjct: 752 YQPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKD 811

Query: 550 FPSLVEALKDKQVKSIVCGTSFTAAI 575
            P  ++    +    + CG  +T A+
Sbjct: 812 KPERIDCFSSQTELVVACGHKYTIAL 837



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 149/309 (48%), Gaps = 30/309 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           +  +ACG +H+  +T  GE+++WG    GRLGHG   D + P+ + +L   +V   +CG 
Sbjct: 555 IAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGG 614

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT  +T  G ++T+G G N   G LG G+      P  + G  +G  +S V CG   TA
Sbjct: 615 AHTAVLTAKGSVFTFGRGRN---GRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTA 671

Query: 354 VVTSAGQLFTF---GDGTFGVLGHGDRISVSTPREVDSLK---GLRTVRAACGVWHTAAV 407
            +   G +FT+   G+G  G LG+ DR  V  PR VD L+   G   V  ACG  HT  +
Sbjct: 672 ALDRQGSVFTWGKTGEGQCG-LGYVDRDQV-VPRCVDKLRDVAGSSVVDVACGYTHTVVL 729

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL---VPTCVAALVEPN-FCQVSC 463
                        +SG+L++WG G+ G+LG GD    L   V     AL  P+   +V C
Sbjct: 730 T------------ASGELYSWGLGEYGQLGTGDVYQPLPARVQLPADALCAPDQLARVYC 777

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
           G   ++A T    ++  G   YG  G    AN   P R++   ++  +  +ACG  +   
Sbjct: 778 GAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTEL-VVACGHKYTIA 836

Query: 523 LTSRTEVYT 531
           L     +YT
Sbjct: 837 LEVNASLYT 845



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 139/300 (46%), Gaps = 36/300 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+++ WG    DG LG G  R         D  VP+ V S +   V + +CGG H A++T
Sbjct: 572 GELYTWGSGE-DGRLGHGDMR---------DRAVPRKVMSLLRESVVSASCGGAHTAVLT 621

Query: 250 KQGEVFSWGEELGGRLGHGVDS--DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            +G VF++G    GRLG G +   D  HP ++   +  ++ LV CG + T A+   G ++
Sbjct: 622 AKGSVFTFGRGRNGRLGLGDNKWRDTPHP-IVGFPQGTSISLVVCGWNFTAALDRQGSVF 680

Query: 308 TWGGS---NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           TWG +    C  G +     +   + K  +  + G  V  V+CG  HT V+T++G+L+++
Sbjct: 681 TWGKTGEGQCGLGYVDRDQVVPRCVDKLRD--VAGSSVVDVACGYTHTVVLTASGELYSW 738

Query: 365 GDGTFGVLGHGDRISVSTPREV----DSLKGL-RTVRAACGVWHTAAVVEVMVGSSSSSN 419
           G G +G LG GD +    P  V    D+L    +  R  CG +H+ A  E  V       
Sbjct: 739 GLGEYGQLGTGD-VYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRV------- 790

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
                +F WG    G  G G    +  P  +          V+CGH  T+AL     +YT
Sbjct: 791 -----MFAWGLNSYGACGLGHTANKDKPERIDCFSSQTELVVACGHKYTIALEVNASLYT 845



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 147/347 (42%), Gaps = 56/347 (16%)

Query: 268 GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL 327
           G +SD     + DA+  + +E    G+  T     S  MY WG      G    G  + L
Sbjct: 414 GDESDDEEGSVEDAVDVVELEE---GDDATQVEEPSSCMYVWGRPPSLEG----GTPLVL 466

Query: 328 WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD------GTFGVLGHGDRI--- 378
             PK ++    G  +  V+CG  H   +TS G ++++GD          V  H   +   
Sbjct: 467 -RPKHVSLA-NGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDN 524

Query: 379 ---------SVSTPREVDSL---KGL-RTVRA--ACGVWHTAAVVEVMVGSSSSSNCSSG 423
                    S   P  V+ L   K L RT  A  ACG  H+ A+ +            +G
Sbjct: 525 ESTRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITD------------AG 572

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           +L+TWG G+ GRLGHGD   R VP  V +L+  +    SCG + T  LT  G V+T G  
Sbjct: 573 ELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRG 632

Query: 484 VYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
             G+  LGD K     P  + G      +  + CG    A L  +  V+TWGK   G+ G
Sbjct: 633 RNGRLGLGDNKWRDT-PHPIVGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCG 691

Query: 542 HGDTD-DRNFPSLVEALKD---KQVKSIVCGTSFTAAIC----LHKW 580
            G  D D+  P  V+ L+D     V  + CG + T  +     L+ W
Sbjct: 692 LGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSW 738


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 167/323 (51%), Gaps = 18/323 (5%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDA 281
           VP   E+   L+V  +A G +    VT +G+V++ GE   GRLG G+ S  V  P+ I A
Sbjct: 20  VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 79

Query: 282 LKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
           L +  V+ VA   G  H  A+T+ G ++ WG    + G LGH + M+   P+ +   L+ 
Sbjct: 80  LSSYVVKKVAVHSGGRHATALTVDGKVFWWG--EGDDGKLGHFSRMNCDKPRLIE-ALKT 136

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
             +  ++CG  H+A +TS+G+L+T+G G +G LGHGD  +   P+ V  L G R ++ AC
Sbjct: 137 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 196

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           G             + + +    G +F+WGDGD G+LG G  E   +P  +  L     C
Sbjct: 197 G----------SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 246

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDY 518
           Q+ CG   ++ALT +G V+T G   Y +LG     + + P  VEG   K  V  +A G  
Sbjct: 247 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH-VAVGAL 305

Query: 519 HVAVLTSRTEVYTWGKGANGRLG 541
           H   +T   +VY WG   +G+ G
Sbjct: 306 HCLAVTDSGQVYAWGDNDHGQQG 328



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/304 (34%), Positives = 151/304 (49%), Gaps = 28/304 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
           G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 49  GKVYACGEAT-NGRLGLGI-SSGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 99

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +T  G+VF WGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 100 LTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 159

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
           TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 160 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 216

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 217 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 264

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           +TWG GD  RLGHG       P  V  L       V+ G    +A+T +G VY  G   +
Sbjct: 265 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 324

Query: 486 GQLG 489
           GQ G
Sbjct: 325 GQQG 328



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 112/329 (34%), Positives = 163/329 (49%), Gaps = 30/329 (9%)

Query: 257 WG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           WG    ++LGG  G    S +  P   + L  +NV  VA G     AVT+ G +Y  G  
Sbjct: 2   WGLNDKDQLGGLKG----SKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG-- 55

Query: 313 NCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTF 369
               G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F +G+G  
Sbjct: 56  EATNGRLGLGISSGTVPIPRQIT-ALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDD 114

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L+TWG
Sbjct: 115 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWG 162

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQ 487
            G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G   +G+
Sbjct: 163 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 222

Query: 488 LGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG   RLGHG   
Sbjct: 223 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 281

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               P +VE L+ K++  +  G     A+
Sbjct: 282 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 310



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407 VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
           VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 32  VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 91

Query: 464 -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
            G     ALT  G V+  G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 92  SGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 150

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT------SFTAAI 575
            LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+      + T   
Sbjct: 151 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 210

Query: 576 CLHKWVSG----VDQSMCSGCRIPFNFKR 600
            +  W  G    + +    GC IP N +R
Sbjct: 211 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 239


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 170/324 (52%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H+  + + GEV++ G    G+LGH  + + + P+ I AL + ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++  G +++WG GS+   GL     E S+ +P+ +   L    +  VSCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLTT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            + + GQ FT+G  + G LG G    S ++P+ V SL+G+   + A G            
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG  + G+LG  D++ R  P  V  L       +SCG   T  LT
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
             G V+T G+   GQLG    N ++  R   +L  + V +IACG  H +A + S   +Y 
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G GA G+LG G T +   PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 21/306 (6%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           V+ P++   + + +V+ VACG +H+  +   G++YT G +    G LGH  E +   P++
Sbjct: 22  VAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTK--GQLGHEREGNK--PEQ 77

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVSTPREVDSLKG 391
           + G L   H+  V+CG  H+  ++  GQLF++G G+ G LG      SV+ PR +  L  
Sbjct: 78  I-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQ 136

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCV 450
              ++ +CG WH  A+             + G+ FTWG    G+LG G +  ++  P  V
Sbjct: 137 QTILQVSCGNWHCLALA------------ADGQFFTWGKNSHGQLGLGKEFPSQASPQRV 184

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNF 509
            +L      QV+ G + + AL+ +G V+  G    GQLG   + + + P  V+   T+  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V  I+CG+ H AVLT    V+T+G G+ G+LGH   +D   P  V  L   +V  I CG 
Sbjct: 245 VY-ISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 570 SFTAAI 575
             T A 
Sbjct: 304 QHTLAF 309



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 154/326 (47%), Gaps = 33/326 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P+ + +     + ++ACG  H+  ++ +G++FSWG    G+LG     D V+ P+LI  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKL 134

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
               +  V+CG  H  A+   G  +TWG +  + G LG G E  S   P+++   LEGI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKN--SHGQLGLGKEFPSQASPQRVRS-LEGIP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           ++ V+ G  H+  ++ +G +F +G    G LG  D     +P  V  L+  + V  +CG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HTA + +            +G +FT+G G  G+LGH      + P  V  L+     Q+
Sbjct: 252 EHTAVLTK------------NGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 462 SCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG--------------KL 505
           +CG   T+A   ++G +Y  G    GQLG     N K P+ V+G              + 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARPDRF 359

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYT 531
             + V++I  G     VL S+ E Y+
Sbjct: 360 KYHIVKQIFSGGDQTFVLCSKYENYS 385



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 121/252 (48%), Gaps = 26/252 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           G +F WG  + DG LG              DS  VP+ ++      +  ++CG  H   +
Sbjct: 103 GQLFSWGAGS-DGQLG---------LTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL 152

Query: 249 TKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
              G+ F+WG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++LSG ++
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG +N   G LG  +E     P  +   L    V  +SCG  HTAV+T  G +FTFG G
Sbjct: 213 GWGMNNA--GQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKNGGVFTFGAG 269

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           + G LGH        PR V  L G    + ACG  HT A V            SSG ++ 
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYA 318

Query: 428 WGDGDRGRLGHG 439
           +G G RG+LG G
Sbjct: 319 FGCGARGQLGTG 330



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  F WG+    G LG G       +        P+ V S   + +  +A GG H+  ++
Sbjct: 156 GQFFTWGK-NSHGQLGLGKEFPSQAS--------PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG   + D   P  +  L+   V  ++CGE HT  +T +G ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G  +C  G LGH +      P+++   L G  V+ ++CG  HT A V S+G ++ FG G 
Sbjct: 267 GAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG G   +V  P  V
Sbjct: 324 RGQLGTGHTCNVKCPSPV 341


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 177/367 (48%), Gaps = 28/367 (7%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           ++F WG  T  G LG GGI           +  VP+ ++     +++ IACG  +  L+T
Sbjct: 77  NMFCWGS-TIHGELGLGGIEDE--------NILVPRELDFQKATEIEQIACGENYTVLIT 127

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           + G+V+S G    G+LGH  +      +LI  L     + VACG HHT AV   G +++W
Sbjct: 128 RDGQVYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSW 185

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G SN   G LG  ++  +     +   L    V  V+CG  H   +T+ G+L+++G  + 
Sbjct: 186 G-SNAE-GQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSD 243

Query: 370 GVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG G  +     P+ + SL G+      CG +H+ A+              SG +F W
Sbjct: 244 GQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAI------------SKSGAVFGW 291

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G    G+LG  D   R +P  +  L     C  +CG   +V LT  G V+T G+ +YGQL
Sbjct: 292 GKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQL 351

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G    + ++  R   +L  + V +I+CG  H + ++ SR  VY WG G  G+LG+  T  
Sbjct: 352 GHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRS 411

Query: 548 RNFPSLV 554
              P +V
Sbjct: 412 VATPQVV 418



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +F WG  + G LG G   D ++  P+ +D  K   +E +ACGE++T  +T  G +Y+ G 
Sbjct: 78  MFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCG- 136

Query: 312 SNCNFGLLGH--GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            N ++G LGH  G +    +P      L+      V+CG  HT  V   GQLF++G    
Sbjct: 137 -NNDYGQLGHEKGRKRLQLIPG-----LDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAE 190

Query: 370 GVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG   +  +   P  V +L     V+ ACG+ H  A+             ++GKL++W
Sbjct: 191 GQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALT------------NNGKLYSW 238

Query: 429 GDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           G    G+LG G D +  + P  +++L       ++CG   ++A++ +G V+  G   +GQ
Sbjct: 239 GSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQ 298

Query: 488 LG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG +   N  LP +++  L    V   ACG+     LT    V+T G G  G+LGHG+T 
Sbjct: 299 LGLNDTRNRNLPRQLQ-TLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTS 357

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +   P  V  L    V  I CG   T  +
Sbjct: 358 NEILPRQVMELMGSTVTQISCGKRHTLGL 386



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 134/277 (48%), Gaps = 25/277 (9%)

Query: 305 DMYTWGGS-NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           +M+ WG + +   GL G  +E ++ +P++L+   +   +  ++CG  +T ++T  GQ+++
Sbjct: 77  NMFCWGSTIHGELGLGGIEDE-NILVPRELDFQ-KATEIEQIACGENYTVLITRDGQVYS 134

Query: 364 FGDGTFGVLGHGD---RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
            G+  +G LGH     R+ +     +  L      + ACG  HT AV E           
Sbjct: 135 CGNNDYGQLGHEKGRKRLQL-----IPGLDAFVFKKVACGAHHTLAVNE----------- 178

Query: 421 SSGKLFTWGDGDRGRLGHGDKE-ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
             G+LF+WG    G+LG   K     VP  V AL      QV+CG +  +ALT  G +Y+
Sbjct: 179 -WGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYS 237

Query: 480 MGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
            GS   GQLG       ++  ++   L    +  I CG YH   ++    V+ WGK   G
Sbjct: 238 WGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFG 297

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG  DT +RN P  ++ L++ +V    CG  F+  +
Sbjct: 298 QLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFL 334


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 190/388 (48%), Gaps = 38/388 (9%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWGGS 312
           V  WG    G+ G   +     P L+D L++++ +  V+CG +++ A+T SGD+  WG  
Sbjct: 10  VVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
            C  G LG GN     +P+ +N  L+  +V  V+C   HTA + S G+L+T+G    G L
Sbjct: 70  GC--GQLGFGNLEDCLVPR-VNLSLK--NVIQVACSDRHTAAILSNGELYTWGCSKNGKL 124

Query: 373 GHGD---RIS---VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           GHG     IS   VS P +V +L+G + ++ +CG +HT  + +              K  
Sbjct: 125 GHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTD------------DKKAL 172

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           TWG G +GRLGHGD +    P  + +L      ++SCG   T  L  TG +Y  G   +G
Sbjct: 173 TWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232

Query: 487 QLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH--- 542
           +LG    +  L P  +EG L    + +++ G  H A +T   +VYTWG+G  GRLGH   
Sbjct: 233 KLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHIFN 290

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSGCR-IPFN 597
           G   D   P  +  L+   +  I CG S + A+     ++ W  G+ +++  G + I  N
Sbjct: 291 GPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTW--GMTKNIGHGIQGIHPN 348

Query: 598 FKRKRHNCYNCGLVYCHTCSSKKSVKAS 625
              K     N  +V    CSS  S+  S
Sbjct: 349 MPSKHPILQNKNIVQV-VCSSSHSIALS 375



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 168/346 (48%), Gaps = 45/346 (13%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GD+ +WG   G G LG          G   D  VP+   S  + +V  +AC  RH A + 
Sbjct: 61  GDLILWGY-GGCGQLG---------FGNLEDCLVPRVNLS--LKNVIQVACSDRHTAAIL 108

Query: 250 KQGEVFSWGEELGGRLGHG------VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
             GE+++WG    G+LGHG       ++ VS P  + AL+   V  V+CG +HT  +T  
Sbjct: 109 SNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDD 168

Query: 304 GDMYTWGGSNCNFGL---LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
               TWG      GL   LGHG+   ++ PK +   L G+ +  +SCG  HTA++   G+
Sbjct: 169 KKALTWG-----LGLQGRLGHGDTQDIFTPKLIE-SLAGLPIKEISCGGHHTAILLVTGK 222

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
           L+ FG G FG LG G    V  PR ++  L+ ++  + + G  H+AAV +          
Sbjct: 223 LYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKC--------- 273

Query: 420 CSSGKLFTWGDGDRGRLGH---GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
              GK++TWG G  GRLGH   G +   L P  ++ L +     +SCG+S +VAL+  G 
Sbjct: 274 ---GKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGD 328

Query: 477 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
           +YT G       G    +  +P++      KN V+ +    + +A+
Sbjct: 329 IYTWGMTKNIGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSHSIAL 374



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 148/290 (51%), Gaps = 26/290 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+++ WG C+ +G LG G         V       KA+E   V+ V   +CG  H   +T
Sbjct: 111 GELYTWG-CSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQV---SCGSYHTGCLT 166

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              +  +WG  L GRLGHG   D+  PKLI++L  + ++ ++CG HHT  + ++G +Y +
Sbjct: 167 DDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMF 226

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           GG    FG LG G+   + +P+ L GPLE I ++ VS G  H+A VT  G+++T+G G  
Sbjct: 227 GGG--AFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG-- 282

Query: 370 GVLGH---GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G LGH   G      +P+ + +L+    V  +CG  H+ A+ +V            G ++
Sbjct: 283 GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDV------------GDIY 330

Query: 427 TWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
           TWG      +GHG +     +P+    L   N  QV C  S ++AL+  G
Sbjct: 331 TWGMTK--NIGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSHSIALSDIG 378


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 190/422 (45%), Gaps = 43/422 (10%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           +  WG  +   +  GGI         + D F+ K        +V+++ CG RH   V   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK--------NVRDVGCGNRHTGFVLDD 52

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G V++ G    G+LGH  D     P+ + AL    +  V+CGE HT A+   G +++WG 
Sbjct: 53  GTVYTCGCNDLGQLGH--DKSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGH 110

Query: 312 SNCNFGLLGHGN------EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +        HG       E  + +P+ +   L  I +  V+CG  H+  ++    ++++G
Sbjct: 111 A-------AHGQIGVSIAEDYIRVPRNIKS-LSDIQIVQVACGHHHSLALSKESNIYSWG 162

Query: 366 DGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
              +G LG G ++   S PR + SL G+     A G  H+ A+              SG 
Sbjct: 163 QNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALT------------ISGA 210

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           +F WG    G+LG  D+  R  P  + +L       + CG   T ALT  G V+T G+  
Sbjct: 211 IFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 485 YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHG 543
           YGQLG   A+ ++  R   +L  N V +IACG  H +A + S   +Y++G G NG+LG G
Sbjct: 271 YGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIG 330

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM-----CSGCRIPFNF 598
            T ++  PS+V+         +          C+ +  SG DQS         C  P +F
Sbjct: 331 STSNKKSPSMVKGNWLTHEDYVRRLPEANGCYCVKRIYSGGDQSFAHYFTIQNCLPPDDF 390

Query: 599 KR 600
           ++
Sbjct: 391 RK 392


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 179/367 (48%), Gaps = 28/367 (7%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           D+F WG  T  G LG GGI           +  +P+ ++     ++Q IACG  +  ++T
Sbjct: 27  DMFCWGS-TIHGELGLGGIEDE--------NILIPRELDFKKAAEIQQIACGENYTVVIT 77

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           + GE++S G    G+LGH  +      +LI  L     +  ACG +HT A+   G +++W
Sbjct: 78  QIGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G SN   G LG  ++  +    ++   L    V  ++CG  H   +T+ G+L+++G  + 
Sbjct: 136 G-SNTE-GQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSE 193

Query: 370 GVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG G D      P+ + +  G+     ACG +H+ A+              SG +F W
Sbjct: 194 GQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAI------------SKSGAVFGW 241

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G    G+LG  D + R +P  +  L     C  +CG   +V LT  G V+T G+ +YGQL
Sbjct: 242 GKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 301

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G    + ++  R   +L  + V +I+CG  H +A++ SR  VY WG G  G+LG+  T  
Sbjct: 302 GHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRS 361

Query: 548 RNFPSLV 554
              P +V
Sbjct: 362 VTTPQVV 368



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 164/333 (49%), Gaps = 27/333 (8%)

Query: 250 KQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           K+ ++F WG  + G LG G   D ++  P+ +D  K   ++ +ACGE++T  +T  G++Y
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 308 TWGGSNCNFGLLGH--GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           + G  N ++G LGH  G +    +P      L+       +CG +HT  +   GQLF++G
Sbjct: 84  SCG--NNDYGQLGHEKGRKRLQLIPG-----LDAFVFKKAACGAYHTLAINEWGQLFSWG 136

Query: 366 DGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
             T G LG   +    S+PR V +L     V+ ACG+ H  A+             ++G+
Sbjct: 137 SNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALT------------NNGE 184

Query: 425 LFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           L++WG    G+LG G D +  + P  ++A +      ++CG   ++A++ +G V+  G  
Sbjct: 185 LYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKN 244

Query: 484 VYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            +GQLG +   +  LP +++  L    +   ACG+     LT    V+T G G  G+LGH
Sbjct: 245 TFGQLGLNDTQDRNLPCQLQ-TLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGH 303

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G   +   P  V  L    V  I CG   T A+
Sbjct: 304 GSNSNEILPRQVMELMGSTVTQISCGKRHTLAL 336


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 184/369 (49%), Gaps = 30/369 (8%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           +++ WG  T  G LG GGI        +   S +P   ++AV    Q +ACG RH   +T
Sbjct: 6   ELYCWGS-TSHGQLGLGGIEDEQ----ILTPSQIPWTPDTAV----QQVACGHRHTLFLT 56

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G+V++ G     +LGH + +    P LI  L++  V  ++CG  H+ A++  G + +W
Sbjct: 57  ANGKVYACGSNDHSQLGHELPT--KRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSW 114

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G ++C  G LGH  +  +    K+   L    V  ++CG  H+  +TS G+L+++G   +
Sbjct: 115 GDNDC--GQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172

Query: 370 GVLGHG---DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G LG     D    + P  + +L G+     ACG            G+ S     SG +F
Sbjct: 173 GQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSGAVF 220

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            WG  + G+LG  D+  R  PT +  L       V+CG   +V LT  G V+T G+  YG
Sbjct: 221 GWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDT 545
           QLG   ++ ++  R+  +L  + + ++ACG+ H +A++ SR  VY +G G++G+LG   T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340

Query: 546 DDRNFPSLV 554
                P +V
Sbjct: 341 KSLMLPQVV 349



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 155/333 (46%), Gaps = 31/333 (9%)

Query: 253 EVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           E++ WG    G+LG G   D  +  P  I    +  V+ VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65

Query: 311 GSNCNFGLLGHGNEMSLWLPKK---LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            ++     LGH       LP K   L   L+   V  +SCG  H+  ++  GQ+ ++GD 
Sbjct: 66  SND--HSQLGHE------LPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDN 117

Query: 368 TFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
             G LGH  D+  V  P+ V  L     V+ ACG  H+ A+             S G+L+
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT------------SCGELY 165

Query: 427 TWGDGDRGRLGHG---DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           +WG    G+LG     D      P  +  L+      ++CG + +  ++ +G V+  G  
Sbjct: 166 SWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 484 VYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             GQLG + +AN   PT+++   T   V  +ACGD     LT+   V+T G GA G+LGH
Sbjct: 226 NCGQLGLNDEANRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G + +   P +V  L    +  + CG   T A+
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 16/175 (9%)

Query: 421 SSGK-LFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
           +SGK L+ WG    G+LG G  + E  L P+ +    +    QV+CGH  T+ LT  G V
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKV 61

Query: 478 YTMGSPVYGQLGDPKANGKLPTR---VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           Y  GS  + QLG      +LPT+   +  +L    V +I+CG  H   L+   +V +WG 
Sbjct: 62  YACGSNDHSQLGH-----ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGD 116

Query: 535 GANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGV 584
              G+LGH  D +    P +V  L  K V  I CG + + A+     L+ W S +
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171


>gi|225434018|ref|XP_002272273.1| PREDICTED: uncharacterized protein LOC100254306 [Vitis vinifera]
          Length = 647

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/114 (62%), Positives = 90/114 (78%)

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
           +  LRT  +ACGVWHT AVV +MVG+ SSSNCSSGK FTWGD D+GR GHGDKEA+LVPT
Sbjct: 19  ISNLRTGISACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPT 78

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVE 502
           CVAA ++PNFC+++CGHSLTVALTT+G+VYT+G P++ +         +P  +E
Sbjct: 79  CVAAPIDPNFCRIACGHSLTVALTTSGYVYTIGRPMHHKGESSNTVQPIPNTIE 132



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 12/87 (13%)

Query: 514 ACGDYH-VAVL-----------TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 561
           ACG +H VAV+            S  + +TWG    GR GHGD + +  P+ V A  D  
Sbjct: 28  ACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPTCVAAPIDPN 87

Query: 562 VKSIVCGTSFTAAICLHKWVSGVDQSM 588
              I CG S T A+    +V  + + M
Sbjct: 88  FCRIACGHSLTVALTTSGYVYTIGRPM 114



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 12/84 (14%)

Query: 239 ACGGRHAALVT------------KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
           ACG  H   V               G+ F+WG+   GR GHG       P  + A  + N
Sbjct: 28  ACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPTCVAAPIDPN 87

Query: 287 VELVACGEHHTCAVTLSGDMYTWG 310
              +ACG   T A+T SG +YT G
Sbjct: 88  FCRIACGHSLTVALTTSGYVYTIG 111


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/340 (33%), Positives = 170/340 (50%), Gaps = 31/340 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+CG  H ALVT+ G++F +G    G+LG G  + V+ P  + AL++  V+L ACG  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100

Query: 298 CAVTLSGDMYTWGGSN-CNFGLLGHGNEMSLWLPKKLN--GPLEGIHVSSVSCGPWHTAV 354
              T  G++Y  GG+N    GL    +  S  L +  N  GP     +  ++ G   +A 
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGP-----IKMLAAGSNTSAA 155

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           +T  G+L+  GD + G +G G   +  TP+EV    G R    +CG +H+A V       
Sbjct: 156 LTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVT------ 207

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   G L+T+G+ D G+LG   ++     VP  V  + +    QV+CG   TVAL 
Sbjct: 208 ------VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVAL- 259

Query: 473 TTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
           T   VY+ G   +GQLG        +LP RV     K  V+  ACG+ H A++T    +Y
Sbjct: 260 TENEVYSFGLGQFGQLGHGTFIFESRLP-RVVEHFRKGRVKHAACGENHTALITDNGLLY 318

Query: 531 TWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           T+G G +G+LG G+ +  N   P+L     D  V S+ CG
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 141/301 (46%), Gaps = 27/301 (8%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           LKN     ++CG+ HT  VT +G ++ +G +  N+G LG G + ++  P  +   L    
Sbjct: 33  LKNDVPLRISCGDEHTALVTENGKLFMFGSN--NWGQLGLGTKTTVNKPTCVKA-LRSER 89

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V   +CG  HT V TS G L+  G    G LG GD                RT       
Sbjct: 90  VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCND-------------RTSFHLVEF 136

Query: 402 WHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           ++    ++++   S++S      G+L+  GD   G++G G +   L P  V+  V     
Sbjct: 137 FNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS--VGKRVF 194

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            VSCG+  +  +T  G +YT G    G+LG   +  AN K+P +V      + V ++ACG
Sbjct: 195 WVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTD--IPDRVVQVACG 252

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             H   LT   EVY++G G  G+LGHG    +   P +VE  +  +VK   CG + TA I
Sbjct: 253 GGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALI 311

Query: 576 C 576
            
Sbjct: 312 T 312



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 153/323 (47%), Gaps = 32/323 (9%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G K     P  V++     V+  ACG  H  + T +G +++ G    G+LG G  +D + 
Sbjct: 71  GTKTTVNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTS 130

Query: 276 PKLIDAL-KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
             L++   K   ++++A G + + A+T  G +Y  G  + + G +G G E +   P++++
Sbjct: 131 FHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRG--DNSEGQIGLGKESNALTPQEVS 188

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--ISVSTPREVDSLKGL 392
               G  V  VSCG +H+A VT  G L+TFG+   G LG       +   P++V  +   
Sbjct: 189 V---GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD- 244

Query: 393 RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD--KEARLVPTCV 450
           R V+ ACG  HT A+ E              +++++G G  G+LGHG    E+RL P  V
Sbjct: 245 RVVQVACGGGHTVALTE-------------NEVYSFGLGQFGQLGHGTFIFESRL-PRVV 290

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF- 509
               +      +CG + T  +T  G +YT G   +G+LG  + N     + +  L   F 
Sbjct: 291 EHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEEN--FTNQFKPTLCPRFL 348

Query: 510 ---VEEIACGDYHVAVLTS-RTE 528
              V  + CG  H+ VL   RTE
Sbjct: 349 DYHVHSVTCGGCHMLVLAKPRTE 371


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 183/369 (49%), Gaps = 30/369 (8%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           +++ WG  T  G LG GGI        +   S +P   ++AV    + +ACG RH   +T
Sbjct: 6   ELYCWGS-TSHGQLGLGGIEDEQ----ILTPSQIPWTPDTAV----EQVACGHRHTLFLT 56

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G+V++ G     +LGH  D     P LI  L++  +  ++CG  H+ A++  G + +W
Sbjct: 57  ANGKVYACGSNDHSQLGH--DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G ++C  G LGH  +  +    K+   L    V  ++CG  H+  +TS G+L+++G   +
Sbjct: 115 GDNDC--GQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172

Query: 370 GVLGHG---DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G LG     D    + P  + +L G+     ACG            G+ S     SG +F
Sbjct: 173 GQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSGAVF 220

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            WG  + G+LG  D+  R  PT +  L       V+CG   +V LT  G V+T G+  YG
Sbjct: 221 GWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDT 545
           QLG   ++ ++  R+  +L  + + ++ACG+ H +A++ SR  VY +G G++G+LG   T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340

Query: 546 DDRNFPSLV 554
                P +V
Sbjct: 341 KSLMLPQVV 349



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 157/333 (47%), Gaps = 31/333 (9%)

Query: 253 EVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           E++ WG    G+LG G   D  +  P  I    +  VE VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACG 65

Query: 311 GSNCNFGLLGHGNEMSLWLPKK---LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            ++     LGH       LP K   L   L+   +  +SCG  H+  ++  GQ+ ++GD 
Sbjct: 66  SND--HSQLGHD------LPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GKLF 426
             G LGH      +T +E+  L   + VR       +  VV++  G++ S   +S G+L+
Sbjct: 118 DCGQLGH------ATDKEIMQLP--KVVRQLV----SKTVVQIACGNNHSLALTSCGELY 165

Query: 427 TWGDGDRGRLGHG---DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           +WG    G+LG     D      P  +  L+      ++CG + +  ++ +G V+  G  
Sbjct: 166 SWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 484 VYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             GQLG + + N   PT+++   T   V  +ACGD     LT+   V+T G GA G+LGH
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G + +   P +V  L    +  + CG   T A+
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 16/175 (9%)

Query: 421 SSGK-LFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
           +SGK L+ WG    G+LG G  + E  L P+ +    +    QV+CGH  T+ LT  G V
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKV 61

Query: 478 YTMGSPVYGQLGDPKANGKLPTR---VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           Y  GS  + QLG       LPT+   +  +L    + +I+CG  H   L+   +V +WG 
Sbjct: 62  YACGSNDHSQLGH-----DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116

Query: 535 GANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGV 584
              G+LGH  D +    P +V  L  K V  I CG + + A+     L+ W S +
Sbjct: 117 NDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171


>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
          Length = 1344

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 190/438 (43%), Gaps = 89/438 (20%)

Query: 211 SGSYA----GVKMDSFVPKAV---ESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           SG Y     G + D F P+ +   +      ++ IACG  H+  +T++ ++ +WG+  GG
Sbjct: 315 SGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGG 374

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN 323
           RLGHG + DV  PK I  L       ++ GE H+ A++   ++YTWG     +G LGHG 
Sbjct: 375 RLGHGDEDDVLVPKEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTG--TYGRLGHGM 432

Query: 324 EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-------- 375
           + S   P KL   L+   +  VSCG +HT  +T  G ++ FG G +G LG          
Sbjct: 433 DTSEKKP-KLIEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVF 491

Query: 376 ---DRISVST----PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
              ++IS       P+E+        + AA G  H+  + +            SGK+++W
Sbjct: 492 SRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAK------------SGKIYSW 539

Query: 429 GDGDRGRLGHGDKEARLVPTCVAAL---------------------VEPNF----CQVSC 463
           G   +G LG        +P  +  +                      E  F     QV+C
Sbjct: 540 GYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEETFSYEVIQVAC 599

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPK------------------ANGKLPTRVEGKL 505
           G   TV+LT  G VY  GS  YGQL   K                   +  L +  +  L
Sbjct: 600 GVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALDSSEQMSL 659

Query: 506 TKNF-------VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-PSLVEAL 557
            K F       +  IACG  H+  ++   E++ WG+   G+LG G   D    P+L+  +
Sbjct: 660 IK-FPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQI 718

Query: 558 KDKQVKSIVCGTSFTAAI 575
             K ++ I CG +++AA+
Sbjct: 719 AHKNIQMIACGDNYSAAV 736



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 162/359 (45%), Gaps = 59/359 (16%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK-LIDALKNIN--VELVA 291
           +  +ACG  H   +T+  E+FSWG    G LG G   D+  P+ LI   K+    +E +A
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIA 350

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           CG++H+  +T    + TWG      G LGHG+E  + +PK++   L       +S G  H
Sbjct: 351 CGKYHSMCLTRKKKILTWGQGQG--GRLGHGDEDDVLVPKEIY-DLSKKKPIFISAGESH 407

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +A ++    L+T+G GT+G LGHG   S   P+ ++ L     +  +CG +HT A+    
Sbjct: 408 SAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAIT--- 464

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAAL---VEPNFCQV---- 461
                      G ++ +G G  G+LG   K+   V   P  ++     VEP    V    
Sbjct: 465 ---------GQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKN 515

Query: 462 -----SCGHSLTVALTTTGHVYTMGSPVYGQLGD--------PKANGKLPTRVEGKL--- 505
                + G++ ++ L  +G +Y+ G    G LG         P   G++P  + GK+   
Sbjct: 516 EAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNI 575

Query: 506 -----------TKNF---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
                       + F   V ++ACG  +   LT+  EVY +G  A G+L   D D   F
Sbjct: 576 DELIQRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAK-DKDQTTF 633



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 157/347 (45%), Gaps = 42/347 (12%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS-HPKLIDALKNINVELVACG 293
           +  IACGG H   +++  E+F WG    G+LG G  SD +  P LI  + + N++++ACG
Sbjct: 670 INYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACG 729

Query: 294 EHHTCAVTLSGDMYTWGG-SNCNFGL---LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           ++++ AV+  G+++  G   N   GL   L  G  +S  L + L  P     + SV+CGP
Sbjct: 730 DNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNL-AP-----IKSVACGP 783

Query: 350 WHTAVVTSA--------GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
            H   +           G  +++G    G LG G +   + P+++ + K  R  + ACG 
Sbjct: 784 NHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNAKE-RFKKVACG- 841

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
                  +  +G +  +     +++ WG+          K+   +P  + AL +     +
Sbjct: 842 ------QDFSIGLTYGN-----QVYLWGNNKYFCDSKITKDVD-IPQLLQALEQAQIKDI 889

Query: 462 SCGHSLTVALTTTGHVYTMGSPV-----YGQLGDPKANGKLP-TRVEGKLTKNFVEEIAC 515
           +C +     L   G +   GS +       Q  D K+   L  T+   +     +E I+ 
Sbjct: 890 ACSYKFCSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFLMETISA 949

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF---PSLVEALKD 559
           G  H A ++ +  +YTWG    GRLG  + + +N    P LV+++ D
Sbjct: 950 GQNHSAAVSVKRSLYTWGHAEGGRLGLNEKEYKNAKIEPILVQSIHD 996



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 15/215 (6%)

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  +  P     ++ V+CG  H   +T   +LF++G G +G LG G R  +  PR +   
Sbjct: 279 PTAIKFPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIE 338

Query: 390 KGLRTVRA---ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV 446
           K   T      ACG +H+  +                K+ TWG G  GRLGHGD++  LV
Sbjct: 339 KKDYTYFIEGIACGKYHSMCLTR------------KKKILTWGQGQGGRLGHGDEDDVLV 386

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT 506
           P  +  L +     +S G S + A++   ++YT G+  YG+LG      +   ++   L 
Sbjct: 387 PKEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLD 446

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
           +  +  ++CG +H   +T +  VY +G+G  G+LG
Sbjct: 447 QYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKLG 481



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 190/515 (36%), Gaps = 161/515 (31%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +++ WG  T  G LG G+  S            PK +E     ++ +++CG  H   +T 
Sbjct: 416 NLYTWGTGTY-GRLGHGMDTSEKK---------PKLIEDLDQYEIIHVSCGAFHTLAITG 465

Query: 251 QGEVFSWGEELGGRLG------HGVDSDVSHPKLIDALKNINVE-------------LVA 291
           QG V+++G+   G+LG       GV    S P+ I   K + VE             L A
Sbjct: 466 QGTVYAFGQGKYGKLGINRKQREGV---FSRPEKISFYK-VGVEPQEMLVQDKNEAILAA 521

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGH--GNEMSL-----WLPKKLNGPLEGI---- 340
            G +H+  +  SG +Y+WG +    GLLG   G E  L      +P +L G +  I    
Sbjct: 522 AGYNHSLCLAKSGKIYSWGYNGK--GLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELI 579

Query: 341 -------------HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH------------- 374
                         V  V+CG  +T  +T+ G+++ FG   +G L               
Sbjct: 580 QRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQ 639

Query: 375 --------GDRISVSTPREVDSLKGLRTVRA---ACGVWHTAAVVEVMVGSSSSSNCSSG 423
                      +  S    +    G  TVR    ACG  H  A+  +             
Sbjct: 640 DQNNNNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRM------------N 687

Query: 424 KLFTWGDGDRGRLGHG---DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
           +LF WG  D G+LG G   D  A   PT +  +   N   ++CG + + A++  G ++  
Sbjct: 688 ELFGWGRNDEGQLGLGFVSDFTAE--PTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVT 745

Query: 481 GSPVYGQLGDPKANGKLPTRVEGKLTKNF--VEEIACGDYHVAVLTSRT--------EVY 530
           G+   G+LG  +A  K    +   L +N   ++ +ACG  H+  +              Y
Sbjct: 746 GNLENGKLGLGQALKK-GFLLSFTLIQNLAPIKSVACGPNHMLAIADYNPDHPIKDGMCY 804

Query: 531 TWGKGANGRLGHGDTDDRN----------------------------------------- 549
           +WG+   G+LG G  +D N                                         
Sbjct: 805 SWGRNWKGQLGIGSKEDSNVPKKIHNAKERFKKVACGQDFSIGLTYGNQVYLWGNNKYFC 864

Query: 550 ---------FPSLVEALKDKQVKSIVCGTSFTAAI 575
                     P L++AL+  Q+K I C   F + +
Sbjct: 865 DSKITKDVDIPQLLQALEQAQIKDIACSYKFCSVL 899



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 69/131 (52%), Gaps = 7/131 (5%)

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTR---VEGKLTKNFVEEIACG 516
           QV+CG +  +A+T    +++ GS  YG LG    +     R   +E K    F+E IACG
Sbjct: 293 QVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIACG 352

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
            YH   LT + ++ TWG+G  GRLGHGD DD   P  +  L  K+   I  G S +AAI 
Sbjct: 353 KYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGESHSAAIS 412

Query: 577 ----LHKWVSG 583
               L+ W +G
Sbjct: 413 EKLNLYTWGTG 423



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 22/205 (10%)

Query: 378 ISVSTPREVDSLKGLRTV-RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL 436
           I VS P  +   K  + + + ACG  H  A+ E              +LF+WG G  G L
Sbjct: 274 IVVSRPTAIKFPKHTKPITQVACGSAHILAITE------------DSELFSWGSGQYGAL 321

Query: 437 GHGDKEARLVPTCVAALVEPN----FCQ-VSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
           G G ++    P  +  ++E      F + ++CG   ++ LT    + T G    G+LG  
Sbjct: 322 GFGTRDDIFEPRHL--IIEKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHG 379

Query: 492 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG-DTDDRNF 550
             +  L  +    L+K     I+ G+ H A ++ +  +YTWG G  GRLGHG DT ++  
Sbjct: 380 DEDDVLVPKEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKK- 438

Query: 551 PSLVEALKDKQVKSIVCGTSFTAAI 575
           P L+E L   ++  + CG   T AI
Sbjct: 439 PKLIEDLDQYEIIHVSCGAFHTLAI 463



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 129/316 (40%), Gaps = 41/316 (12%)

Query: 189 LGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           + ++F WG    +G LG G         V   +  P  +      ++Q IACG  ++A V
Sbjct: 686 MNELFGWGR-NDEGQLGLGF--------VSDFTAEPTLIRQIAHKNIQMIACGDNYSAAV 736

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAV------- 300
           +  GE+F  G    G+LG G             ++N+  ++ VACG +H  A+       
Sbjct: 737 SAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIKSVACGPNHMLAIADYNPDH 796

Query: 301 -TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
               G  Y+W G N   G LG G++    +PKK++   E      V+CG   +  +T   
Sbjct: 797 PIKDGMCYSW-GRNWK-GQLGIGSKEDSNVPKKIHNAKE--RFKKVACGQDFSIGLTYGN 852

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
           Q++ +G+  +       +  V  P+ + +L+  +    AC     + + +          
Sbjct: 853 QVYLWGNNKYFCDSKITK-DVDIPQLLQALEQAQIKDIACSYKFCSVLND---------- 901

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP----NFCQ--VSCGHSLTVALTT 473
              G++  WG     R+    K+ +     +A    P    +F    +S G + + A++ 
Sbjct: 902 --KGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFLMETISAGQNHSAAVSV 959

Query: 474 TGHVYTMGSPVYGQLG 489
              +YT G    G+LG
Sbjct: 960 KRSLYTWGHAEGGRLG 975


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 178/359 (49%), Gaps = 22/359 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+++ CG RH   + + G V++ G    G+LGH  +     P+ + +L   N+  V+CGE
Sbjct: 36  VRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGH--EKARKKPEQVVSLDAQNIVAVSCGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT A+   G ++ WG GS+   GL     E  L +P+ +   L  +H++ V+CG WH+ 
Sbjct: 94  AHTLALNDKGQVFAWGLGSDGQLGL--SIVEDCLRVPRTVKS-LSEVHITQVACGYWHSL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            +   G++F++G   +G LG G +   V +P+ + SL+G+   + + G            
Sbjct: 151 ALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S     SG +F WG    G+LG GD + R  P  +  L       + CG   T ALT
Sbjct: 199 GAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
             G V+T G+  YGQLG    N ++  R   +L  + V +IACG  H +A + S  ++ +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDS 318

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV--CGTSFTAAICLHKWVSGVDQSM 588
           +G G NG+LG   T +R  P+ V+          V  C +    + C+ +  +G DQS 
Sbjct: 319 FGLGGNGQLGTRSTCNRISPTPVKGCWRAHADPCVELCISEAERSYCVKRIYAGGDQSF 377



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 152/327 (46%), Gaps = 23/327 (7%)

Query: 254 VFSWGEELGGRLGHG-VDSDVS-HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D +V   P+  +  +   V  V CG  HT  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
             CN  G LGH  E +   P+++   L+  ++ +VSCG  HT  +   GQ+F +G G+ G
Sbjct: 60  --CNDLGQLGH--EKARKKPEQVVS-LDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDG 114

Query: 371 VLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG       +  PR V SL  +   + ACG WH+ A+               G++F+WG
Sbjct: 115 QLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALAR------------GGEIFSWG 162

Query: 430 DGDRGRLGHGDKEARLV-PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
               G+LG G + A +  P  + +L    F Q+S G + +  LT +G ++  G   +GQL
Sbjct: 163 QNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQL 222

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
           G    + +    +   L    V  I CG+ H A LT    V+T+G G  G+LGH  T+  
Sbjct: 223 GLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
             P  V  L    V  I CG   T A 
Sbjct: 283 VNPRKVFELMGSVVSQIACGRQHTLAF 309



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 143/301 (47%), Gaps = 26/301 (8%)

Query: 153 GRTGHLKGLSGDTFRVSLSSA-VSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        VSL +  + + S G  H    +  G VF WG    DG LG  I  
Sbjct: 64  GQLGHEKARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWG-LGSDGQLGLSI-- 120

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 270
                 V+    VP+ V+S   + +  +ACG  H+  + + GE+FSWG+   G+LG G  
Sbjct: 121 ------VEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQ 174

Query: 271 -SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
            + V  P++I +L+ I    ++ G  H+  +TLSG ++ WG +   FG LG G+      
Sbjct: 175 GACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRN--KFGQLGLGDNDDRRF 232

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P  L   L    V  + CG  HTA +T  G +FTFG G +G LGH        PR+V  L
Sbjct: 233 PVLLK-TLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFEL 291

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
            G    + ACG  HT A +            SSGK+ ++G G  G+LG      R+ PT 
Sbjct: 292 MGSVVSQIACGRQHTLAFIP-----------SSGKIDSFGLGGNGQLGTRSTCNRISPTP 340

Query: 450 V 450
           V
Sbjct: 341 V 341



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 37/291 (12%)

Query: 150 GSDGRTGHLKGLSGDTFRVSLS----SAVSSSSQGSGHDDGDSL---GDVFIWGECTGDG 202
           GSDG+ G    +  D  RV  +    S V  +    G+    +L   G++F WG+    G
Sbjct: 111 GSDGQLG--LSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQ-NKYG 167

Query: 203 ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG 262
            LG G   +   +        P+ ++S   +    I+ GG H+  +T  G +F WG    
Sbjct: 168 QLGLGQQGACVCS--------PQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKF 219

Query: 263 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
           G+LG G + D   P L+  L++  V  + CGE HT A+T  G ++T+G     +G LGH 
Sbjct: 220 GQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAG--GYGQLGHN 277

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           +      P+K+   L G  VS ++CG  HT A + S+G++ +FG G  G LG     +  
Sbjct: 278 STNHEVNPRKVF-ELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRI 336

Query: 382 TPREVDSLKGLRTVRAACGVW--HTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
           +P  V             G W  H    VE+ +  +  S C   +++  GD
Sbjct: 337 SPTPVK------------GCWRAHADPCVELCISEAERSYCVK-RIYAGGD 374


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 177/377 (46%), Gaps = 51/377 (13%)

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH----PKLID-A 281
           +ES    ++  I  G  H   +T  G+V + G    G+ G G  + VSH    PK+ D A
Sbjct: 460 IESLQQKEIIQIGAGNEHTIALTVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDNA 519

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGI 340
           +  ++      G  HT  VT+ G   T G    N+ G LGHGN  S  +PK +   LE  
Sbjct: 520 ISQVHA---YNGCEHTILVTMDGRAATCG---YNYRGQLGHGNTASESVPKIVRS-LENR 572

Query: 341 HVSSVSCGPWHTAVVTS---AGQ--LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            V  VSC  +HT +      +GQ  L+TFG   +G LGH D I    P+ V+++     V
Sbjct: 573 IVRLVSCSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVV 632

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
             ACG +HT  V             ++GK F +G  D G+LG    E +LVP  V A +E
Sbjct: 633 SVACGQYHTMVVT------------ATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLE 680

Query: 456 PNFC-QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG----------------KLP 498
            + C ++ CG+  T+ L +  H++  G   YGQLG  +AN                 +L 
Sbjct: 681 KHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLI 740

Query: 499 TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
             +EGK    F    ACG YH   ++    +Y +G+  +G+LG GDT++R +P  ++   
Sbjct: 741 EELEGKDIVRF----ACGCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFV 796

Query: 559 DKQVKSIVCGTSFTAAI 575
            K+V  +  G   T  +
Sbjct: 797 GKRVALVAAGFYHTVVL 813



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 159/343 (46%), Gaps = 35/343 (10%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV+S G+   G LGHG  +     + I++L+   +  +  G  HT A+T+ G + T G +
Sbjct: 434 EVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCGYN 493

Query: 313 N---CNFG---LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           +   C  G    + H  EM    PK  +  +  +H  +   G  HT +VT  G+  T G 
Sbjct: 494 DNGQCGQGGTARVSHLCEM----PKMGDNAISQVHAYN---GCEHTILVTMDGRAATCGY 546

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
              G LGHG+  S S P+ V SL+  R VR  +C  +HT    E               L
Sbjct: 547 NYRGQLGHGNTASESVPKIVRSLEN-RIVRLVSCSYYHTVMACE-------EDGSGQQYL 598

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           +T+G  D G+LGH D   R VP  V A+ + +   V+CG   T+ +T TG  +  G   Y
Sbjct: 599 YTFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDY 658

Query: 486 GQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           GQLG D   N  +P +V   L K+   EI CG YH  VL S   ++ +G+   G+LG G 
Sbjct: 659 GQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGR 718

Query: 545 TDDR------------NFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +              ++  L+E L+ K +    CG   T A+
Sbjct: 719 ANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAV 761



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 140/301 (46%), Gaps = 31/301 (10%)

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT--- 297
           G  H  LVT  G   + G    G+LGHG  +  S PK++ +L+N  V LV+C  +HT   
Sbjct: 528 GCEHTILVTMDGRAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMA 587

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           C    SG  Y +     ++G LGH + +   +P+ +   +   HV SV+CG +HT VVT+
Sbjct: 588 CEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEA-MGDQHVVSVACGQYHTMVVTA 646

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            G+ F FG   +G LG     +   P +V + L+    +   CG +HT  +         
Sbjct: 647 TGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVL--------- 697

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC--------VAALVE----PNFCQVSCG 464
              CS   LF +G  D G+LG G   A               A L+E     +  + +CG
Sbjct: 698 ---CSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACG 754

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVL 523
              TVA++  G +Y  G   +GQLG    N ++ P  ++  + K  V  +A G YH  VL
Sbjct: 755 CYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKR-VALVAAGFYHTVVL 813

Query: 524 T 524
           T
Sbjct: 814 T 814



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 14/201 (6%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           +D  VP+ VE+     V ++ACG  H  +VT  G+ F++G+   G+LG     +   P  
Sbjct: 615 IDRKVPQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQ 674

Query: 279 IDA-LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG-----NEMSLWLPK- 331
           + A L+      + CG +HT  +     ++ +G ++  +G LG G     +  +L L + 
Sbjct: 675 VRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRND--YGQLGLGRANASSTANLQLQQQ 732

Query: 332 -----KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
                +L   LEG  +   +CG +HT  V+  G ++ FG    G LG GD      P  +
Sbjct: 733 RFSYARLIEELEGKDIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPI 792

Query: 387 DSLKGLRTVRAACGVWHTAAV 407
           D   G R    A G +HT  +
Sbjct: 793 DDFVGKRVALVAAGFYHTVVL 813



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 4/156 (2%)

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           ++++ G    G LGHGD  +R     + +L +    Q+  G+  T+ALT  G V T G  
Sbjct: 434 EVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCGYN 493

Query: 484 VYGQLGDPKANGKLPTRVEG-KLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGRL 540
             GQ G      ++    E  K+  N + ++    G  H  ++T      T G    G+L
Sbjct: 494 DNGQCGQ-GGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCGYNYRGQL 552

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
           GHG+T   + P +V +L+++ V+ + C    T   C
Sbjct: 553 GHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMAC 588



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 34/68 (50%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           D+   ACG  H   V+  G ++ +G    G+LG G  ++  +P  ID      V LVA G
Sbjct: 747 DIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALVAAG 806

Query: 294 EHHTCAVT 301
            +HT  +T
Sbjct: 807 FYHTVVLT 814


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 172/355 (48%), Gaps = 30/355 (8%)

Query: 192 VFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +F WG  T  G LG GGI           + F+P+ V+ A   +V+ IACG  +   +T 
Sbjct: 1   MFCWGS-TIHGELGLGGIEDE--------NIFMPRQVDFAKANEVEQIACGENYTVTITN 51

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            G+V+S G    G+LGH  +      +LI  L     + +ACG  HT AV   G +++WG
Sbjct: 52  DGQVYSCGNNDYGQLGH--EKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWG 109

Query: 311 GSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
              CN  G LG  +        ++   L    +  ++CG  H+  +T+ G+L+++G    
Sbjct: 110 ---CNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNRE 166

Query: 370 GVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG G   ++   P+ + +L  +     ACG +HT  +              SG +F W
Sbjct: 167 GQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVI------------SKSGVVFAW 214

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G    G+LG  D + R+VP  +  L     C  +CG   +V LT  G V+T G+ +YGQL
Sbjct: 215 GRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQL 274

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGH 542
           G      ++  R   +L  + V +I+CG  H +A++ SR  VY WG G  G+LG+
Sbjct: 275 GHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGN 329



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 148/326 (45%), Gaps = 21/326 (6%)

Query: 254 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +F WG  + G LG G   D ++  P+ +D  K   VE +ACGE++T  +T  G +Y+ G 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCG- 59

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
            N ++G LGH          +L   L+      ++CG  HT  V   GQLF++G    G 
Sbjct: 60  -NNDYGQLGHEKARK---RLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQ 115

Query: 372 LG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
           LG +    +  TPR V +L     V+ ACG+ H+ A+             + G+L++WG 
Sbjct: 116 LGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALT------------NDGELYSWGS 163

Query: 431 GDRGRLGHGDKEA-RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
              G+LG G      + P  +  L       ++CG   TV ++ +G V+  G   +GQLG
Sbjct: 164 NREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLG 223

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
                 ++       L    V   ACG+     LT    V+T G G  G+LGHG+  +  
Sbjct: 224 LNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEI 283

Query: 550 FPSLVEALKDKQVKSIVCGTSFTAAI 575
            P  V  L    V  I CG   T A+
Sbjct: 284 LPRQVMELMGSTVTQISCGKRHTLAL 309



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 132/276 (47%), Gaps = 21/276 (7%)

Query: 306 MYTWGGS-NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           M+ WG + +   GL G  +E ++++P++++   +   V  ++CG  +T  +T+ GQ+++ 
Sbjct: 1   MFCWGSTIHGELGLGGIEDE-NIFMPRQVDFA-KANEVEQIACGENYTVTITNDGQVYSC 58

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G+  +G LGH    +    + +  L      + ACG  HT AV E             G+
Sbjct: 59  GNNDYGQLGHEK--ARKRLQLIPGLDAFVFKKIACGSCHTLAVNE------------WGQ 104

Query: 425 LFTWGDGDRGRLGHGDKE-ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           LF+WG   +G+LG    +     P  V AL      Q++CG   ++ALT  G +Y+ GS 
Sbjct: 105 LFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSN 164

Query: 484 VYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
             GQLG          P R+   L    +  IACG YH  V++    V+ WG+   G+LG
Sbjct: 165 REGQLGIGSHTVTEIKPKRI-ITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLG 223

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
             DT  R  P  +  L++ +V    CG  F+  + L
Sbjct: 224 LNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTL 259


>gi|237840751|ref|XP_002369673.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211967337|gb|EEB02533.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221503319|gb|EEE29017.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii VEG]
          Length = 1015

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 165/373 (44%), Gaps = 73/373 (19%)

Query: 272 DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK 331
           +++ P+L+DALKNIN E V+ G      V  SG++Y WG ++   G LG G+     +P+
Sbjct: 120 EMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANS--EGQLGTGDRRDASVPR 177

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRI------------ 378
            +   L G  V +V+C   HT      G  + +G    G LG HG  I            
Sbjct: 178 LVKA-LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 236

Query: 379 ------------SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
                       +V TPR ++SL G      ACG +H+A      +G       S   LF
Sbjct: 237 TGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSA-----FLGIYEQDRTS---LF 288

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           T G G  GRLGHGD+E R +PT V AL   N   ++CG   T  +T+ G +YT G   +G
Sbjct: 289 TCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFG 348

Query: 487 QLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR----- 539
           +LG     G   LP  V G L    V  +A G  H A +T+  E+YTWG+G  G      
Sbjct: 349 KLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNLTRFF 408

Query: 540 -----------------------------LGHGDTD-DRNFPSLVEALKDKQVKSIVCGT 569
                                        LGHGD +   N P+ + AL  K V  + C +
Sbjct: 409 RGAWRRSLVSSSSTSFAETPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCAS 468

Query: 570 SFTAAICLHKWVS 582
           +FT A C  + VS
Sbjct: 469 TFTVAFCDPQRVS 481



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 121/255 (47%), Gaps = 38/255 (14%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALV----TKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
            P+ +ES     + ++ACG  H+A +      +  +F+ G  L GRLGHG + D   P  
Sbjct: 252 TPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTA 311

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPL 337
           + AL+N+N+  +ACG HHT  VT +G +YTWGG+   FG LG G+   S  LPK ++GPL
Sbjct: 312 VHALENVNITAIACGAHHTACVTSAGTLYTWGGA--AFGKLGLGSTRGSQLLPKHVSGPL 369

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
               V SV+ G  H+A VT+ G+L+T+G G  G L                    R  R 
Sbjct: 370 RNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNL-------------------TRFFR- 409

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEP 456
             G W  + V       + +         T     +  LGHGD E     P C+ AL   
Sbjct: 410 --GAWRRSLVSSSSTSFAETP--------TLHASSKTILGHGDPEVPPNRPACLRALNGK 459

Query: 457 NFCQVSCGHSLTVAL 471
              Q+SC  + TVA 
Sbjct: 460 GVVQLSCASTFTVAF 474



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 119/288 (41%), Gaps = 49/288 (17%)

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
           +L   L+ I+   VS G    AVV  +G+L+ +G  + G LG GDR   S PR V +L G
Sbjct: 125 RLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALHG 184

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG-HG----------- 439
                 AC   HT   ++             G  + WG    GRLG HG           
Sbjct: 185 KVVKAVACSQEHTVCCLD------------DGSAYAWGCALNGRLGLHGLSIPSSAGLGV 232

Query: 440 ---DKEARLVPTCVA-ALVEPNFCQVSCGHSLTVALTTTGH-------------VYTMGS 482
                 AR  P   A A+  P   +  CG+ +        H             ++T G 
Sbjct: 233 FSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGL 292

Query: 483 PVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            + G+LG      + LPT V      N +  IACG +H A +TS   +YTWG  A G+LG
Sbjct: 293 GLNGRLGHGDEEDRHLPTAVHALENVN-ITAIACGAHHTACVTSAGTLYTWGGAAFGKLG 351

Query: 542 HGDT-DDRNFPSLVEA-LKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
            G T   +  P  V   L++K V S+  G+  +A +     L+ W  G
Sbjct: 352 LGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQG 399


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 170/341 (49%), Gaps = 29/341 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GDV++WG  +   +    I   G+  G   D  +P+ VES  + ++  I+ G  H+A V 
Sbjct: 596 GDVYMWGRGS---VKNPPIATLGN--GTFDDQLLPQKVES--LQEIVVISIGFYHSAAVK 648

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             GE+ +WG    G+LGHG   +   PK++ ++ +  V  V CGE HT  +T +G ++TW
Sbjct: 649 SNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTW 708

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G S   +G LG G+      P  +   L+  H+  ++CG  H AV+T+  ++  FG+G  
Sbjct: 709 GTS--EYGQLGLGDTQKNCTPMLVTS-LDKYHIIQIACGATHNAVLTNNREVLVFGNG-- 763

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
             +G  + IS+  P  V SLK +   R +CG + TAA+ E          C  G ++TWG
Sbjct: 764 AAMGSANIISI--PIMVPSLKIMNIERLSCGHYSTAALTE----------C--GDVYTWG 809

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            G     GHG  EA   P  V  L   +  Q+SCG      LT +G +YT G   +GQLG
Sbjct: 810 SGQELGHGHGTSEAH--PKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLG 867

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
               +   P +++  L   F+  I+CG+ H A L   T  +
Sbjct: 868 HAAGDQNRPKKIDSLLKTTFM-SISCGENHNAALFDTTRSF 907



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 185/378 (48%), Gaps = 39/378 (10%)

Query: 211 SGSYAGVKMDSF------VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE----- 259
           SGSY  +   S        P+ + +  + D+ +I+CG  ++A +T+ G+V+ WG      
Sbjct: 549 SGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSVKN 608

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGL 318
                LG+G   D   P+ +++L+ I V  ++ G +H+ AV  +G++ TWG G +   G 
Sbjct: 609 PPIATLGNGTFDDQLLPQKVESLQEIVV--ISIGFYHSAAVKSNGELLTWGCGED---GQ 663

Query: 319 LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
           LGHG+  +  +PK +   +    V+ V CG  HT  +T  G++FT+G   +G LG GD  
Sbjct: 664 LGHGDVFNQPIPKVVQS-ITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQ 722

Query: 379 SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH 438
              TP  V SL     ++ ACG  H A +             ++ ++  +G+G       
Sbjct: 723 KNCTPMLVTSLDKYHIIQIACGATHNAVL------------TNNREVLVFGNGA----AM 766

Query: 439 GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ-LGDPKANGKL 497
           G      +P  V +L   N  ++SCGH  T ALT  G VYT GS   GQ LG      + 
Sbjct: 767 GSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGS---GQELGHGHGTSEA 823

Query: 498 PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
             ++   L    + +I+CG  H+A LT   ++YT GK   G+LGH    D+N P  +++L
Sbjct: 824 HPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHA-AGDQNRPKKIDSL 882

Query: 558 KDKQVKSIVCGTSFTAAI 575
                 SI CG +  AA+
Sbjct: 883 LKTTFMSISCGENHNAAL 900



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 152/321 (47%), Gaps = 28/321 (8%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE---LVACGEHHTCAVTLSGDMYTWG 310
           + +WG     +LG       S P   + L N N+     ++CG +++ A+T +GD+Y WG
Sbjct: 544 LMTWGSGSYCKLGFKSVEKDSQPTP-ERLPNFNISDICSISCGSYYSAALTENGDVYMWG 602

Query: 311 -GS--NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            GS  N     LG+G      LP+K+    E   +  +S G +H+A V S G+L T+G G
Sbjct: 603 RGSVKNPPIATLGNGTFDDQLLPQKVESLQE---IVVISIGFYHSAAVKSNGELLTWGCG 659

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G LGHGD  +   P+ V S+      +  CG  HT  + +            +GK+FT
Sbjct: 660 EDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTK------------NGKVFT 707

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG  + G+LG GD +    P  V +L + +  Q++CG +    LT    V   G+   G 
Sbjct: 708 WGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGN---GA 764

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
                    +P  V      N +E ++CG Y  A LT   +VYTWG G    LGHG    
Sbjct: 765 AMGSANIISIPIMVPSLKIMN-IERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGHGTS 821

Query: 548 RNFPSLVEALKDKQVKSIVCG 568
              P LVE L+++ ++ I CG
Sbjct: 822 EAHPKLVETLRNQSIRQISCG 842



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 22/231 (9%)

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG--DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           T + TS G L T+G G++  LG    ++ S  TP  + +         +CG +++AA+ E
Sbjct: 536 TQLDTSRG-LMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTE 594

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDR-----GRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
                       +G ++ WG G         LG+G  + +L+P  V +L E     +S G
Sbjct: 595 ------------NGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQE--IVVISIG 640

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
              + A+ + G + T G    GQLG      +   +V   +T ++V ++ CG+ H   LT
Sbjct: 641 FYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLT 700

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              +V+TWG    G+LG GDT     P LV +L    +  I CG +  A +
Sbjct: 701 KNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVL 751


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 177/383 (46%), Gaps = 55/383 (14%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS--HPKLIDALKNINVELVAC 292
            V N++CG  H A +T+ G V++WG    G LGHG  S V   HPK +   K+  V+ V C
Sbjct: 877  VVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVC 936

Query: 293  GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
            G  HT A T SG +Y WG  N   G LG G+    WLP  +   L  +HV+ ++ G  HT
Sbjct: 937  GGEHTLARTESGSVYGWG--NGRIGQLGLGDRTLHWLPVPIK-TLRKMHVTQLAAGYAHT 993

Query: 353  AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             VV  +G++  FG G  G LG G R  +  P ++ ++  +  V+AACG  HTA + E   
Sbjct: 994  IVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPSI--VQAACGYCHTALLTE--- 1048

Query: 413  GSSSSSNCSSGKLFTWGDGDRGRLGHGD--KEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                     +G+++T G    G+LGH D  +  RL P  V  L       ++CG   T+A
Sbjct: 1049 ---------AGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIA 1099

Query: 471  LTTTGHVYT----MGSPVYGQLGDPKANGKL----PTRVEGKLTKNFVEEIACGDYHVAV 522
            +T   +VYT     G+   G +   +    L    P+ V+G + K  +  ++CG  H   
Sbjct: 1100 ITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKR-ISLVSCGHAHSVA 1158

Query: 523  LTSRTEVYTWG-----------KGANGRLGHGDTDDRNFPSLVEALKDKQ-------VKS 564
             T   EVY W            +G+      G T+    P LV A+ D Q       VK 
Sbjct: 1159 TTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEA---PLLVSAIPDGQDAKSKPVVKH 1215

Query: 565  IVCGTSFTAAI----CLHKWVSG 583
               G  FT  +     L+ W SG
Sbjct: 1216 AAAGEEFTLVVTENGLLYSWGSG 1238



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 135/269 (50%), Gaps = 30/269 (11%)

Query: 332  KLNGPLEGI----HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST--PRE 385
            KLN P  G+     V +VSCG  H A +T  G ++T+G    G LGHGD+  V    P++
Sbjct: 863  KLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQ 922

Query: 386  VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
            V   K        CG  HT A  E            SG ++ WG+G  G+LG GD+    
Sbjct: 923  VIFFKSKCVKEVVCGGEHTLARTE------------SGSVYGWGNGRIGQLGLGDRTLHW 970

Query: 446  VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGK 504
            +P  +  L + +  Q++ G++ T+ +  +G V   G    GQLG   + +  +PT+++  
Sbjct: 971  LPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAM 1030

Query: 505  LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFPSLVEALKDKQV 562
             +   + + ACG  H A+LT   EVYT G   +G+LGH D   +DR  P +VE L  K++
Sbjct: 1031 PS---IVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRI 1087

Query: 563  KSIVCGTSFTAAIC----LHKW--VSGVD 585
            + I CG+  T AI     ++ W  V G D
Sbjct: 1088 RFIACGSFHTIAITDLDNVYTWGGVQGTD 1116



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 59/139 (42%), Gaps = 13/139 (9%)

Query: 495 GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD--DRNFPS 552
           GKL     G ++   V  ++CG  H A LT    VYTWG+  +G LGHGD     +  P 
Sbjct: 862 GKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPK 921

Query: 553 LVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSGCR------IPFNFKRKR 602
            V   K K VK +VCG   T A      ++ W +G    +  G R      +P    RK 
Sbjct: 922 QVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKM 981

Query: 603 HNCYNCGLVYCHTCSSKKS 621
           H        Y HT    KS
Sbjct: 982 H-VTQLAAGYAHTIVVLKS 999


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 179/369 (48%), Gaps = 30/369 (8%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           +++ WG  T  G LG GGI               P+ +       VQ ++CG RH   +T
Sbjct: 6   ELYCWGS-TSHGQLGLGGIEDE--------QILTPRQIPWTPDTAVQQVSCGHRHTLFLT 56

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G+V++ G     +LGH  D     P+LI  L++  +  ++CG  H+ A++  G + +W
Sbjct: 57  ATGKVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G ++C  G LGH  E  +    K+   L    V  ++CG  H+  +TS G+L+++G   +
Sbjct: 115 GDNDC--GQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172

Query: 370 GVLG---HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G LG     D    + P  + +L G+     ACG            G+ S     SG +F
Sbjct: 173 GQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSGAVF 220

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            WG  + G+LG  D+  R  PT +  L        +CG   +V LT  G V+T G+  YG
Sbjct: 221 GWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYG 280

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDT 545
           QLG   ++ ++  R+  +L  + + ++ACG+ H +A + SR +VY +G G++G+LG   T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRST 340

Query: 546 DDRNFPSLV 554
                P +V
Sbjct: 341 KSLMLPQVV 349



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 154/333 (46%), Gaps = 31/333 (9%)

Query: 253 EVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           E++ WG    G+LG G   D  +  P+ I    +  V+ V+CG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACG 65

Query: 311 GSNCNFGLLGHGNEMSLWLPKK---LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            ++  +  LGH       LP K   L   L+   +  +SCG  H+  ++  GQ+ ++GD 
Sbjct: 66  SND--YSQLGHD------LPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 368 TFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
             G LGH  ++  V  P+ V  L     V+ ACG  H+ A+             S G+L+
Sbjct: 118 DCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT------------SCGELY 165

Query: 427 TWGDGDRGRLG---HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           +WG    G+LG     D      P  +  L+      ++CG + +  ++ +G V+  G  
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 484 VYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             GQLG + + N   PT+++   T   V   ACGD     LT+   V+T G GA G+LGH
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLG-VRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G + +   P +V  L    +  + CG   T A 
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAF 317



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 85/175 (48%), Gaps = 16/175 (9%)

Query: 421 SSGK-LFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
           +SGK L+ WG    G+LG G  + E  L P  +    +    QVSCGH  T+ LT TG V
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKV 61

Query: 478 YTMGSPVYGQLGDPKANGKLPTR---VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           Y  GS  Y QLG       LPT+   +  +L    + +I+CG  H   L+   +V +WG 
Sbjct: 62  YACGSNDYSQLGH-----DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116

Query: 535 GANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGV 584
              G+LGH  + +    P +V  L  K V  I CG + + A+     L+ W S +
Sbjct: 117 NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 185/394 (46%), Gaps = 40/394 (10%)

Query: 189 LGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           L +VF+WG  + +       H  G+         +P+ V S  + DVQ +  G     ++
Sbjct: 341 LSEVFMWGSNSSNQ------HAEGATEVTD----IPRLVRS--LSDVQQVEAGQYCTFII 388

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG-----EHHTCAVTLS 303
             +G V + G+   GRLG G  S+   PK I    NIN ++         + H+ A++ +
Sbjct: 389 DTKGCVSACGKNSYGRLGLGNSSNQPVPKRI----NINCKIKQVSSSKGCDGHSLALSDT 444

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           G++Y+WG  +  +G LGHG+  +   PK + GP  G  +  VS G  H+A VTS GQL+T
Sbjct: 445 GEVYSWGDGD--YGKLGHGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYT 502

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS- 422
           +G+G  G LGHGD      P  V SL  +     ACG  HT A             CS  
Sbjct: 503 WGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLA-------------CSRD 549

Query: 423 -GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
              ++++G GD G+LGHG+      P  +  L      +V+ G   +VALT TG V+T G
Sbjct: 550 GNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWG 609

Query: 482 SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
                  G  +     P  VE  L +  + +I+ GD H   LT    VY WG    G+ G
Sbjct: 610 QGSNLGCGSSEITLFSPAVVED-LMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCG 668

Query: 542 HG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G  T   + PS V  L+ KQ+  I  GTS + A
Sbjct: 669 QGHSTSPVSRPSKVINLEGKQINQISAGTSHSVA 702



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 179/391 (45%), Gaps = 36/391 (9%)

Query: 191  DVFIWGE----CTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            D ++WG       GD  +G  I+    ++ +K+ +F             Q I CG     
Sbjct: 3393 DAYLWGNGRNGQLGDTAVGQCIN---IWSPIKIQNFKI----------AQRIVCGQNCTF 3439

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLS 303
            ++T QG V S GE   GRLGHG    + +  +I AL+   +  V+     + H+ A+T +
Sbjct: 3440 VLTSQGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTET 3499

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            G++++WG  +  FG LGHGN      PK +   L  + V  V+CG  H+AV++  G+++ 
Sbjct: 3500 GEVFSWGDGD--FGKLGHGNNERQRKPKLIES-LYDVVVIQVACGHKHSAVLSQDGEVYV 3556

Query: 364  FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            FG    G LG G  I+   P ++     L     ACG  HT  + E +V           
Sbjct: 3557 FGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTICIGENVV----------- 3605

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
              + +G+G+ G+LG G K+   VP  +  L   N  +  CG+  T+ L+  G +Y+ GS 
Sbjct: 3606 --WAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSD 3663

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
                  D     KL      +     V ++A G  HV VLT+R  V+ WG    G LG G
Sbjct: 3664 NLQDATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFG 3723

Query: 544  DTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                   P +++ L DK +K I    +  AA
Sbjct: 3724 HDLPVQKPMIIQILSDKNIKQIATSRTHCAA 3754



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 148/330 (44%), Gaps = 32/330 (9%)

Query: 202  GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
            G LG G   S S   + M S    A++  V+  V        H+  +T+ GEVFSWG+  
Sbjct: 3456 GRLGHG--HSDSLPNLTMIS----ALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGD 3509

Query: 262  GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
             G+LGHG +     PKLI++L ++ V  VACG  H+  ++  G++Y +G +    G LG 
Sbjct: 3510 FGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSA--EHGKLGL 3567

Query: 322  GNEMSLWLPKKL--NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
            G  ++   P K+   G L   ++  ++CG  HT +      ++ FG+G  G LG G +  
Sbjct: 3568 GGHINKKRPTKIVHKGFL---NIKYIACGQNHT-ICIGENVVWAFGEGEGGKLGIGSKKD 3623

Query: 380  VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
            +  P+E+ +L G    +A CG   T  + E             G+L++ G  +       
Sbjct: 3624 IYVPQEIITLNGKNIKKAYCGNGFTMFLSE------------DGELYSCGSDNLQDATDV 3671

Query: 440  DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT 499
                +L+P  +          V+ G    + LT  GHV+  G+   G LG       LP 
Sbjct: 3672 LYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILG---FGHDLPV 3728

Query: 500  R---VEGKLTKNFVEEIACGDYHVAVLTSR 526
            +   +   L+   +++IA    H A  T+ 
Sbjct: 3729 QKPMIIQILSDKNIKQIATSRTHCAAWTAE 3758



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 25/242 (10%)

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  V  G + T ++ + G +   G  ++G LG G+  +   P+ ++    ++ V ++ G 
Sbjct: 375 VQQVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGC 434

Query: 402 -WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD----KEARLVP-TCVAALVE 455
             H+ A+ +            +G++++WGDGD G+LGHGD    KE +L+    +  ++E
Sbjct: 435 DGHSLALSD------------TGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIE 482

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIA 514
                VS G+  + A+T+ G +YT G   +G+LG    N + +PT V+  L+   V  +A
Sbjct: 483 ----LVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKS-LSDMPVGYVA 537

Query: 515 CGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           CG  H +A       V+++G G NG+LGHG+T     P  +E L+  ++K +  G  F+ 
Sbjct: 538 CGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSV 597

Query: 574 AI 575
           A+
Sbjct: 598 AL 599



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 142/336 (42%), Gaps = 36/336 (10%)

Query: 146  LSSG-GSDGRTGH--LKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSL-----GDVFIWGE 197
            LS G G+ GR GH     L   T   +L   V +    S   DG SL     G+VF WG+
Sbjct: 3448 LSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSWGD 3507

Query: 198  CTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFS 256
              GD G LG G +              PK +ES   + V  +ACG +H+A++++ GEV+ 
Sbjct: 3508 --GDFGKLGHGNNERQRK---------PKLIESLYDVVVIQVACGHKHSAVLSQDGEVYV 3556

Query: 257  WGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 316
            +G    G+LG G   +   P  I     +N++ +ACG++HT  +   G+   W       
Sbjct: 3557 FGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTICI---GENVVWAFGEGEG 3613

Query: 317  GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
            G LG G++  +++P+++   L G ++    CG   T  ++  G+L++ G           
Sbjct: 3614 GKLGIGSKKDIYVPQEI-ITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDATDVL 3672

Query: 377  RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL 436
                  P ++   +G      A G  H   +             + G ++ WG+   G L
Sbjct: 3673 YTEKLIPEKIFEFQGQIVTDVATGPDHVLVLT------------ARGHVWAWGNNCEGIL 3720

Query: 437  GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
            G G       P  +  L + N  Q++   +   A T
Sbjct: 3721 GFGHDLPVQKPMIIQILSDKNIKQIATSRTHCAAWT 3756



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 24/222 (10%)

Query: 362  FTFGDGTFGVLGH---GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            + +G+G  G LG    G  I++ +P ++ + K  +  R  CG   T  +           
Sbjct: 3395 YLWGNGRNGQLGDTAVGQCINIWSPIKIQNFKIAQ--RIVCGQNCTFVLT---------- 3442

Query: 419  NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC-----GHSLTVALTT 473
              S G + + G+G+ GRLGHG  ++    T ++AL      QVS      GHSL  ALT 
Sbjct: 3443 --SQGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSL--ALTE 3498

Query: 474  TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
            TG V++ G   +G+LG      +   ++   L    V ++ACG  H AVL+   EVY +G
Sbjct: 3499 TGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFG 3558

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               +G+LG G   ++  P+ +       +K I CG + T  I
Sbjct: 3559 SAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTICI 3600


>gi|221482889|gb|EEE21220.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii GT1]
          Length = 1020

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 165/373 (44%), Gaps = 73/373 (19%)

Query: 272 DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK 331
           +++ P+L+DALKNIN E V+ G      V  SG++Y WG ++   G LG G+     +P+
Sbjct: 120 EMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANS--EGQLGTGDRRDASVPR 177

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRI------------ 378
            +   L G  V +V+C   HT      G  + +G    G LG HG  I            
Sbjct: 178 LVKA-LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 236

Query: 379 ------------SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
                       +V TPR ++SL G      ACG +H+A      +G       S   LF
Sbjct: 237 TGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSA-----FLGIYEQDRTS---LF 288

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           T G G  GRLGHGD+E R +PT V AL   N   ++CG   T  +T+ G +YT G   +G
Sbjct: 289 TCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFG 348

Query: 487 QLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR----- 539
           +LG     G   LP  V G L    V  +A G  H A +T+  E+YTWG+G  G      
Sbjct: 349 KLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNLTRFF 408

Query: 540 -----------------------------LGHGDTD-DRNFPSLVEALKDKQVKSIVCGT 569
                                        LGHGD +   N P+ + AL  K V  + C +
Sbjct: 409 RGAWRRSLVSSSSTSFAETPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCAS 468

Query: 570 SFTAAICLHKWVS 582
           +FT A C  + VS
Sbjct: 469 TFTVAFCDPQRVS 481



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 121/255 (47%), Gaps = 38/255 (14%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALV----TKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
            P+ +ES     + ++ACG  H+A +      +  +F+ G  L GRLGHG + D   P  
Sbjct: 252 TPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTA 311

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPL 337
           + AL+N+N+  +ACG HHT  VT +G +YTWGG+   FG LG G+   S  LPK ++GPL
Sbjct: 312 VHALENVNITAIACGAHHTACVTSAGTLYTWGGA--AFGKLGLGSTRGSQLLPKHVSGPL 369

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
               V SV+ G  H+A VT+ G+L+T+G G  G L                    R  R 
Sbjct: 370 RNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNL-------------------TRFFR- 409

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEP 456
             G W  + V       + +         T     +  LGHGD E     P C+ AL   
Sbjct: 410 --GAWRRSLVSSSSTSFAETP--------TLHASSKTILGHGDPEVPPNRPACLRALNGK 459

Query: 457 NFCQVSCGHSLTVAL 471
              Q+SC  + TVA 
Sbjct: 460 GVVQLSCASTFTVAF 474



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 119/288 (41%), Gaps = 49/288 (17%)

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
           +L   L+ I+   VS G    AVV  +G+L+ +G  + G LG GDR   S PR V +L G
Sbjct: 125 RLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALHG 184

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG-HG----------- 439
                 AC   HT   ++             G  + WG    GRLG HG           
Sbjct: 185 KVVKAVACSQEHTVCCLD------------DGSAYAWGCALNGRLGLHGLSIPSSAGLGV 232

Query: 440 ---DKEARLVPTCVA-ALVEPNFCQVSCGHSLTVALTTTGH-------------VYTMGS 482
                 AR  P   A A+  P   +  CG+ +        H             ++T G 
Sbjct: 233 FSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGL 292

Query: 483 PVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            + G+LG      + LPT V      N +  IACG +H A +TS   +YTWG  A G+LG
Sbjct: 293 GLNGRLGHGDEEDRHLPTAVHALENVN-ITAIACGAHHTACVTSAGTLYTWGGAAFGKLG 351

Query: 542 HGDT-DDRNFPSLVEA-LKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
            G T   +  P  V   L++K V S+  G+  +A +     L+ W  G
Sbjct: 352 LGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQG 399


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 195/404 (48%), Gaps = 31/404 (7%)

Query: 192 VFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           ++ WG  T  G LG GGI              VP+ ++ +   +V  + CG  H   +TK
Sbjct: 3   IYCWGN-TAHGELGLGGIEEE--------QVMVPRKMDWSQADEVVRVECGTSHTLFLTK 53

Query: 251 QGEVFSWGEELGGRLGHGVDSDVS-HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           +G++++ G    G+LGH +D+  +  P+ + +L+N  +  ++CG  H+ A+T  G +++W
Sbjct: 54  EGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSW 113

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G +    G LGH  E       ++   +   HV  ++ G +H   +T+ G+L+ +G  ++
Sbjct: 114 GSNAV--GQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSY 171

Query: 370 GVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG G     V  P  + SL G+     ACG  H+ AV              SG +F W
Sbjct: 172 GQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAV------------SKSGAIFGW 219

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G    G+LG  D  +R  PT +  L       +SCG   +V LT  G V+T G+  +GQL
Sbjct: 220 GKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQL 279

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G    + ++  R   +L  + + +IACG  H +A + SR ++Y +G G  G+LG G   +
Sbjct: 280 GHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGN 339

Query: 548 RNFPSLVEALKDK-QVKSIVCGTSFTAAICLHKWVSGVDQSMCS 590
            + P +V     K   KS  C  +    I +++  SG DQ   S
Sbjct: 340 HSTPQIVRGPWFKTDFKSSDCDET---QIIVNRIFSGGDQCFVS 380


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 182/369 (49%), Gaps = 30/369 (8%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           +++ WG  T  G LG GGI        +   S +P   ++AV    Q +ACG RH   +T
Sbjct: 6   ELYCWGS-TSHGQLGLGGIEDEQ----ILTPSQIPWTPDTAV----QQVACGHRHTLFLT 56

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G+V++ G     +LGH  D     P LI  L++  +  + CG  H+ A++  G + +W
Sbjct: 57  ATGKVYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G ++C  G LGH  +  +    K+   L    V  ++CG  H+  +TS G+L+++G   +
Sbjct: 115 GDNDC--GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIY 172

Query: 370 GVLG---HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G LG     D    + P  + +L G+     ACG            G+ S     SG +F
Sbjct: 173 GQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSGAVF 220

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            WG  + G+LG  D+  R  PT +  L       V+CG   +V LT  G V+T G+  YG
Sbjct: 221 GWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDT 545
           QLG   ++ ++  R+  +L  + + ++ACG+ H +A++ SR  VY +G G++G+LG   T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340

Query: 546 DDRNFPSLV 554
                P +V
Sbjct: 341 KSLMLPQVV 349



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 155/334 (46%), Gaps = 33/334 (9%)

Query: 253 EVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           E++ WG    G+LG G   D  +  P  I    +  V+ VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 311 GSNCNFGLLGHGNEMSLWLPKK---LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            ++  +  LGH       LP K   L   L+   +  + CG  H+  ++  GQ+ ++GD 
Sbjct: 66  SND--YSQLGHD------LPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 368 TFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GKL 425
             G LGH  D+  V  P+ V  L              T  VV++  G++ S   +S G+L
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLV-------------TKTVVQIACGNNHSLALTSCGEL 164

Query: 426 FTWGDGDRGRLG---HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           ++WG    G+LG     D      P  +  L+      ++CG + +  ++ +G V+  G 
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGR 224

Query: 483 PVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              GQLG + + N   PT+++   T   V  +ACGD     LT+   V+T G GA G+LG
Sbjct: 225 NNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG 283

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           HG + +   P +V  L    +  + CG   T A+
Sbjct: 284 HGFSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 85/175 (48%), Gaps = 16/175 (9%)

Query: 421 SSGK-LFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
           +SGK L+ WG    G+LG G  + E  L P+ +    +    QV+CGH  T+ LT TG V
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKV 61

Query: 478 YTMGSPVYGQLGDPKANGKLPTR---VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           Y  GS  Y QLG       LPT+   +  +L    + +I CG  H   L+   +V +WG 
Sbjct: 62  YACGSNDYSQLGH-----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 116

Query: 535 GANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGV 584
              G+LGH  D +    P +V  L  K V  I CG + + A+     L+ W S +
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 182/369 (49%), Gaps = 30/369 (8%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           +++ WG  T  G LG GGI        +   S +P   ++AV    Q +ACG RH   +T
Sbjct: 6   ELYCWGS-TSHGQLGLGGIEDEQ----ILTPSQIPWTPDTAV----QQVACGHRHTLFLT 56

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G+V++ G     +LGH  D     P LI  L++  +  + CG  H+ A++  G + +W
Sbjct: 57  ATGKVYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G ++C  G LGH  +  +    K+   L    V  ++CG  H+  +TS G+L+++G   +
Sbjct: 115 GDNDC--GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIY 172

Query: 370 GVLG---HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G LG     D    + P  + +L G+     ACG            G+ S     SG +F
Sbjct: 173 GQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSGAVF 220

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            WG  + G+LG  D+  R  PT +  L       V+CG   +V LT  G V+T G+  YG
Sbjct: 221 GWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDT 545
           QLG   ++ ++  R+  +L  + + ++ACG+ H +A++ SR  VY +G G++G+LG   T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340

Query: 546 DDRNFPSLV 554
                P +V
Sbjct: 341 KSLMLPQVV 349



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 155/334 (46%), Gaps = 33/334 (9%)

Query: 253 EVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           E++ WG    G+LG G   D  +  P  I    +  V+ VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 311 GSNCNFGLLGHGNEMSLWLPKK---LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            ++  +  LGH       LP K   L   L+   +  + CG  H+  ++  GQ+ ++GD 
Sbjct: 66  SND--YSQLGHD------LPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 368 TFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GKL 425
             G LGH  D+  V  P+ V  L              T  VV++  G++ S   +S G+L
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLV-------------TKTVVQIACGNNHSLALTSCGEL 164

Query: 426 FTWGDGDRGRLG---HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           ++WG    G+LG     D      P  +  L+      ++CG + +  ++ +G V+  G 
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGR 224

Query: 483 PVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              GQLG + + N   PT+++   T   V  +ACGD     LT+   V+T G GA G+LG
Sbjct: 225 NNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG 283

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           HG + +   P +V  L    +  + CG   T A+
Sbjct: 284 HGFSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 85/175 (48%), Gaps = 16/175 (9%)

Query: 421 SSGK-LFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
           +SGK L+ WG    G+LG G  + E  L P+ +    +    QV+CGH  T+ LT TG V
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKV 61

Query: 478 YTMGSPVYGQLGDPKANGKLPTR---VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           Y  GS  Y QLG       LPT+   +  +L    + +I CG  H   L+   +V +WG 
Sbjct: 62  YACGSNDYSQLGH-----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 116

Query: 535 GANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGV 584
              G+LGH  D +    P +V  L  K V  I CG + + A+     L+ W S +
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171


>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
           rerio]
          Length = 708

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 115/340 (33%), Positives = 170/340 (50%), Gaps = 31/340 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+CG  H ALVT+ G++F +G    G+LG G  + V+ P  + AL++  V+L ACG  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100

Query: 298 CAVTLSGDMYTWGGSN-CNFGLLGHGNEMSLWLPKKLN--GPLEGIHVSSVSCGPWHTAV 354
              T  G++Y  GG+N    GL    +  S  L +  N  GP     +  ++ G   +A 
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGP-----IKMLAAGSNTSAA 155

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           +T  G+L+  GD + G +G G   +  TP+EV    G R    +CG +H+A V       
Sbjct: 156 LTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVT------ 207

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   G L+T+G+ D G+LG   ++     VP  V  + +    QV+CG   TVALT
Sbjct: 208 ------VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVALT 260

Query: 473 TTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
               VY+ G   +GQLG        +LP  VE    K  V+  ACG+ H A++T    +Y
Sbjct: 261 EN-EVYSFGLGQFGQLGHGTFIFESRLPRVVE-HFRKGRVKHAACGENHTALITDNGLLY 318

Query: 531 TWGKGANGRLGHGDTDDRNF--PSLVEALKDKQVKSIVCG 568
           T+G G +G+LG G+ +  N   P+L     D  V S+ CG
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 141/300 (47%), Gaps = 27/300 (9%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           LKN     ++CG+ HT  VT +G ++ +G +  N+G LG G + ++  P  +   L    
Sbjct: 33  LKNDVPLRISCGDEHTALVTENGKLFMFGSN--NWGQLGLGTKTTVNKPTCVKA-LRSER 89

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V   +CG  HT V TS G L+  G    G LG GD                RT       
Sbjct: 90  VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCND-------------RTSFHLVEF 136

Query: 402 WHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           ++    ++++   S++S      G+L+  GD   G++G G +   L P  V+  V     
Sbjct: 137 FNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS--VGKRVF 194

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            VSCG+  +  +T  G +YT G    G+LG   +  AN K+P +V      + V ++ACG
Sbjct: 195 WVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTD--IPDRVVQVACG 252

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             H   LT   EVY++G G  G+LGHG    +   P +VE  +  +VK   CG + TA I
Sbjct: 253 GGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALI 311



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 153/323 (47%), Gaps = 32/323 (9%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G K     P  V++     V+  ACG  H  + T +G +++ G    G+LG G  +D + 
Sbjct: 71  GTKTTVNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTS 130

Query: 276 PKLIDAL-KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
             L++   K   ++++A G + + A+T  G +Y  G  + + G +G G E +   P++++
Sbjct: 131 FHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRG--DNSEGQIGLGKESNALTPQEVS 188

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--ISVSTPREVDSLKGL 392
               G  V  VSCG +H+A VT  G L+TFG+   G LG       +   P++V  +   
Sbjct: 189 ---VGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD- 244

Query: 393 RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD--KEARLVPTCV 450
           R V+ ACG  HT A+ E              +++++G G  G+LGHG    E+RL P  V
Sbjct: 245 RVVQVACGGGHTVALTE-------------NEVYSFGLGQFGQLGHGTFIFESRL-PRVV 290

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF- 509
               +      +CG + T  +T  G +YT G   +G+LG  + N     + +  L   F 
Sbjct: 291 EHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEEN--FTNQFKPTLCPRFL 348

Query: 510 ---VEEIACGDYHVAVLTS-RTE 528
              V  + CG  H+ VL   RTE
Sbjct: 349 DYHVHSVTCGGCHMLVLAKPRTE 371


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 181/397 (45%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K +        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRI--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  ++
Sbjct: 56  YTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G E  + +P+ +   L  I +  V+CG +H+  ++   ++F++G   +G LG
Sbjct: 114 GQLGL--PGTEECIRVPRNIKS-LSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G +    ++P  + SL G+   + A G            G+ S     SG +F WG   
Sbjct: 171 LGYEYKKQNSPHVIKSLLGIPFAQIAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D   R VPT + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +I CG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWLPYSTQCLIPADSEQYYCVKRIFSGGDQSF 375



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 129/262 (49%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG  T DG LG      G+   ++    VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWGLAT-DGQLG----LPGTEECIR----VPRNIKSLSEIQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVFSWG+   G+LG G +    + P +I +L  I    +A G  H+  +TLSG ++ 
Sbjct: 154 KGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  ++   ++P  L   L    V  + CG  HTA +T  G +FTFG G 
Sbjct: 214 WGRNK--FGQLGLNDDNDRYVPTLLKS-LRTQKVVHICCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    +  CG  HT A V            SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVP-----------SSGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGTGTTSNRKSPFTV 341



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 132/275 (48%), Gaps = 23/275 (8%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  L    +  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFLNK-RIRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    +   P  V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--ARKRPEHVGALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L E    QV+CG+  ++AL+    V++ G 
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQ 163

Query: 483 PVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
             YGQLG      K   P  ++  L   F + IA G  H  VLT    ++ WG+   G+L
Sbjct: 164 NKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G  D +DR  P+L+++L+ ++V  I CG   TAA+
Sbjct: 223 GLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 181/397 (45%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K +        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRI--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  ++
Sbjct: 56  YTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G E  + +P+ +   L  I +  V+CG +H+  ++   ++F++G   +G LG
Sbjct: 114 GQLGL--PGTEECIRVPRNIKS-LSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G +    ++P  + SL G+   + A G            G+ S     SG +F WG   
Sbjct: 171 LGYEYKKQNSPHVIKSLLGIPFAQIAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D   R VPT + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +I CG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWLPYSTQCLIPADSEQYYCVKRIFSGGDQSF 375



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 129/262 (49%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG  T DG LG      G+   ++    VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWGLAT-DGQLG----LPGTEECIR----VPRNIKSLSEIQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVFSWG+   G+LG G +    + P +I +L  I    +A G  H+  +TLSG ++ 
Sbjct: 154 KGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  ++   ++P  L   L    V  + CG  HTA +T  G +FTFG G 
Sbjct: 214 WGRNK--FGQLGLNDDNDRYVPTLLKS-LRTQKVVHICCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    +  CG  HT A V            SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVP-----------SSGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGTGTTSNRKSPFTV 341



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 132/275 (48%), Gaps = 23/275 (8%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  L    +  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFLNK-RIRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    +   P  V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--ARKRPEHVGALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L E    QV+CG+  ++AL+    V++ G 
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQ 163

Query: 483 PVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
             YGQLG      K   P  ++  L   F + IA G  H  VLT    ++ WG+   G+L
Sbjct: 164 NKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G  D +DR  P+L+++L+ ++V  I CG   TAA+
Sbjct: 223 GLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 169/357 (47%), Gaps = 22/357 (6%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
           S V      AVVL    ++ G  H+  +     + +WG    G+LGHG   D   P +I 
Sbjct: 6   SAVADEAPPAVVL----VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVIS 61

Query: 281 ALKNINVELVACGEHHTCAVTLS-GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
                 +  V CG  HT A +     +Y+WG  +  FG LGHGN   ++ P+ +   L+G
Sbjct: 62  GFDAPGITSVICGADHTTAYSEDEHQVYSWGWGD--FGRLGHGNSTDVFTPQPVK-ALQG 118

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           I +  ++CG  H   VT AG++ ++G    G LG G       P+ + + +G+     A 
Sbjct: 119 IKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAA 178

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           G  HTAAV E             G ++ WG G  G LG GD+  R VP  V+++      
Sbjct: 179 GAEHTAAVTE------------DGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMV 226

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDY 518
            V+CG   T+ ++++G +YT G   YGQLG       L P +VE  L  +   +I+ G  
Sbjct: 227 LVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSSTSQISGGWR 285

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H   LTS  ++Y WG    G++G GD  D   P+ V   ++++V  + CG   T A 
Sbjct: 286 HTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAF 342



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 127/371 (34%), Positives = 180/371 (48%), Gaps = 42/371 (11%)

Query: 116 LDKALSDAVLYAAPPKVLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRV 168
           +D ALS AV   APP V+L S  A  SV  L+         G DG+ GH  G + D    
Sbjct: 1   MDAALS-AVADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGH--GDAEDRLVP 57

Query: 169 SLSSA-----VSSSSQGSGHDDGDSLGD--VFIWGECTGDGILGGGIHRSGSYAGVKMDS 221
           ++ S      ++S   G+ H    S  +  V+ WG         G   R G   G   D 
Sbjct: 58  TVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGW--------GDFGRLGH--GNSTDV 107

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P+ V++   + ++ +ACG  H   VT  GEV SWG    G+LG G   D   P+ I A
Sbjct: 108 FTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQA 167

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            + I+V+++A G  HT AVT  GD+Y WG     +G LG G+    ++P+K++  +EG  
Sbjct: 168 FEGISVKMIAAGAEHTAAVTEDGDIYGWGWG--RYGNLGLGDRNDRFVPEKVS-SVEGDK 224

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           +  V+CG  HT  V+S+G L+T+G   +G LGHGD      P +V++LK   T + + G 
Sbjct: 225 MVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGW 284

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HT A+             S GKL+ WG    G++G GD      P  V    E    QV
Sbjct: 285 RHTMALT------------SDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQV 332

Query: 462 SCGHSLTVALT 472
           +CG   T+A T
Sbjct: 333 ACGWRHTLAFT 343



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 62/131 (47%), Gaps = 1/131 (0%)

Query: 448 TCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLT 506
           + VA    P    VS G S +VAL     + T G    GQLG   A  +L PT + G   
Sbjct: 6   SAVADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDA 65

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
                 I   D+  A      +VY+WG G  GRLGHG++ D   P  V+AL+  ++K + 
Sbjct: 66  PGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA 125

Query: 567 CGTSFTAAICL 577
           CG S   A+ +
Sbjct: 126 CGDSHCLAVTM 136


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 198/433 (45%), Gaps = 100/433 (23%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE-----SAVVLDVQNIACGGRH 244
            G++F WG+    G LG G+        +      PK +E     S +++    + CGG H
Sbjct: 1237 GELFTWGK-NQSGQLGHGL-------DIGKIQTTPKRLEFFRGKSPIIM----VECGGEH 1284

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            +  V     V+SWG++  G+LGHG  S   + PK+I+ +    ++ +A G  HT  +  S
Sbjct: 1285 SICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKS 1344

Query: 304  GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIH-----VSSVSCGPWHTAVVTS 357
            G++Y++G  +   G LGHG+ +S  +P ++    + GI      ++ ++CG  H+ + + 
Sbjct: 1345 GELYSFGYGDQ--GQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSD 1402

Query: 358  AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
             G+++++G G  G LGHG+  S++ PR +++LKG+   + +CG ++T A  ++       
Sbjct: 1403 NGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGV--TKISCGHFYTMATTDL------- 1453

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
                   +++WG G+  +LGHG  +    P  V   ++ N  ++ CG + T+ LT  G +
Sbjct: 1454 -----KNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDL 1508

Query: 478  ----------------------------------------------YTMGSPVY------ 485
                                                           +  SP+Y      
Sbjct: 1509 NNNSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGE 1568

Query: 486  -------GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
                   G L  P  +  +PT ++G    N + +I+CG    A++TS   +Y WG G  G
Sbjct: 1569 HGKLGLGGDLKSPFFDKPIPTAIKGVNALNLI-DISCGTDFTAMITSNGALYVWGYGNFG 1627

Query: 539  RLGHGDTDDRNFP 551
            ++G+G TDD   P
Sbjct: 1628 QIGNGKTDDAWVP 1640



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 156/293 (53%), Gaps = 18/293 (6%)

Query: 238  IACGGRHAALVTKQGEVFSWGEELGGRLGHGVD--SDVSHPKLIDALKNIN-VELVACGE 294
            ++CG  H AL+++ GE+F+WG+   G+LGHG+D     + PK ++  +  + + +V CG 
Sbjct: 1223 VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECGG 1282

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
             H+  V     +Y+WG     FG LGHG +       K+   + G  + +++ G  HT V
Sbjct: 1283 EHSICVDSDYVVYSWGQDK--FGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIV 1340

Query: 355  VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA-VVEVMVG 413
            +  +G+L++FG G  G LGHG  +S S P  ++    L T+    G+ H    + ++  G
Sbjct: 1341 LKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIE----LNTI---VGIQHGGGKITQIACG 1393

Query: 414  SSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
               S  CS +G++++WG G +G+LGHG+ E+   P  + AL      ++SCGH  T+A T
Sbjct: 1394 FGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEAL--KGVTKISCGHFYTMATT 1451

Query: 473  TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
               +VY+ G   + +LG     N   P  V+  + KN V +I CG  H   LT
Sbjct: 1452 DLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKN-VSKIVCGLNHTITLT 1503



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 147/304 (48%), Gaps = 42/304 (13%)

Query: 290  VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLW--LPKKLNGPLEGIHVSSVSC 347
            V+CG  H   ++ SG+++TWG +    G LGHG ++      PK+L        +  V C
Sbjct: 1223 VSCGWDHVALISESGELFTWGKNQS--GQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVEC 1280

Query: 348  GPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            G  H+  V S   ++++G   FG LGHG + +S + P+ ++ + G +    A G  HT  
Sbjct: 1281 GGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIV 1340

Query: 407  VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN--------- 457
            + +            SG+L+++G GD+G+LGHG   ++ +PT     +E N         
Sbjct: 1341 LKK------------SGELYSFGYGDQGQLGHGSFVSKSIPT----RIELNTIVGIQHGG 1384

Query: 458  --FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG----DPKANGKLPTRVEGKLTKNFVE 511
                Q++CG   +V  +  G VY+ G    GQLG    +  A  +L   ++G      V 
Sbjct: 1385 GKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKG------VT 1438

Query: 512  EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            +I+CG ++    T    VY+WG G + +LGHG   +   P +V+    K V  IVCG + 
Sbjct: 1439 KISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNH 1498

Query: 572  TAAI 575
            T  +
Sbjct: 1499 TITL 1502



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 148/332 (44%), Gaps = 59/332 (17%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            PK +E      +Q IA G  H  ++ K GE++S+G    G+LGHG     S P  I+   
Sbjct: 1317 PKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNT 1376

Query: 284  NINVE-------LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
             + ++        +ACG  H+   + +G++Y+WG      G LGHGN  S+  P+ +   
Sbjct: 1377 IVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQ--GQLGHGNYESIARPRLIEA- 1433

Query: 337  LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
            L+G  V+ +SCG ++T   T    ++++G G    LGHG   + +TPR VD        +
Sbjct: 1434 LKG--VTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSK 1491

Query: 397  AACGVWHTAAVVEV-MVGSSSSSNCS-----------------------------SGKL- 425
              CG+ HT  +     + ++S SN                               SG+L 
Sbjct: 1492 IVCGLNHTITLTYPGDLNNNSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLG 1551

Query: 426  ----------FTWGDGDRGRLGHG-DKEARL----VPTCVAALVEPNFCQVSCGHSLTVA 470
                      +  G G+ G+LG G D ++      +PT +  +   N   +SCG   T  
Sbjct: 1552 LNENSQVSPIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAM 1611

Query: 471  LTTTGHVYTMGSPVYGQLGDPKANGK-LPTRV 501
            +T+ G +Y  G   +GQ+G+ K +   +P R+
Sbjct: 1612 ITSNGALYVWGYGNFGQIGNGKTDDAWVPIRI 1643



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 6/125 (4%)

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL---PTRVEGKLTKNFVEEIAC 515
             +VSCG      ++ +G ++T G    GQLG     GK+   P R+E    K+ +  + C
Sbjct: 1221 IKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVEC 1280

Query: 516  GDYHVAVLTSRTEVYTWGKGANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G  H   + S   VY+WG+   G+LGHG  +  +N P ++E +  +++++I  G  F   
Sbjct: 1281 GGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAG--FAHT 1338

Query: 575  ICLHK 579
            I L K
Sbjct: 1339 IVLKK 1343


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 181/397 (45%), Gaps = 28/397 (7%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K +        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRI--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  ++
Sbjct: 56  YTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD 113

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              GL   G E  + +P+ +   L  I +  V+CG +H+  ++   ++F++G   +G LG
Sbjct: 114 GQLGL--PGTEECIRVPRNIKS-LSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLG 170

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G +    ++P  + SL G+   + A G            G+ S     SG +F WG   
Sbjct: 171 LGYEYKKQNSPHVIKSLLGIPFAQIAAG------------GAHSFVLTLSGAIFGWGRNK 218

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  D   R VPT + +L       + CG   T ALT  G V+T G+  YGQLG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            + ++  R   +L  + V +I CG  H  A + S   +Y++G G NG+LG G T +R  P
Sbjct: 279 TSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSP 338

Query: 552 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
             V+          +         C+ +  SG DQS 
Sbjct: 339 FTVKGNWLPYSTQCLIPADSEQYYCVKRIFSGGDQSF 375



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 129/262 (49%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG  T DG LG      G+   ++    VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWGLAT-DGQLG----LPGTEECIR----VPRNIKSLSEIQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVFSWG+   G+LG G +    + P +I +L  I    +A G  H+  +TLSG ++ 
Sbjct: 154 KGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  ++   ++P  L   L    V  + CG  HTA +T  G +FTFG G 
Sbjct: 214 WGRNK--FGQLGLNDDNDRYVPTLLKS-LRTQKVVHICCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    +  CG  HT A V            SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVP-----------SSGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGTGTTSNRKSPFTV 341



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 132/275 (48%), Gaps = 23/275 (8%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N +FG LG G  +E  +  P+K +  L    +  V CG  HT  V   G ++T
Sbjct: 1   MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFLNK-RIRDVGCGLRHTVFVLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    +   P  V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--ARKRPEHVGALDAQNIVAVSCGEAHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGH-GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++ WG    G+LG  G +E   VP  + +L E    QV+CG+  ++AL+    V++ G 
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQ 163

Query: 483 PVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
             YGQLG      K   P  ++  L   F + IA G  H  VLT    ++ WG+   G+L
Sbjct: 164 NKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G  D +DR  P+L+++L+ ++V  I CG   TAA+
Sbjct: 223 GLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 159/328 (48%), Gaps = 20/328 (6%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHP----KLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           V+SWG+   G+LG G  ++V  P     L D L   NV  +  G+ H+  +   GD+YTW
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G      G LGH     + L   +   +E    S+V+CG  HT VVT  G ++T+G+   
Sbjct: 61  GRGW--EGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKA 118

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG GD  S ++P  +DS   L +V + ACG +HT A+            C  G +++W
Sbjct: 119 GQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAI------------CIEGTIWSW 166

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G    G+LGHG+ +    PT V  + +    + +CG   T+ LT    +Y  GS  YGQL
Sbjct: 167 GRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQL 226

Query: 489 GDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G  +++   L   +   L ++    + CG  H   L    ++YTWG+   G+LG G    
Sbjct: 227 GLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTH 286

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              P LV AL+  +V+ I CG     A 
Sbjct: 287 SPVPELVTALRSVRVQQIACGYDHCVAF 314



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 166/333 (49%), Gaps = 25/333 (7%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS-HPKLIDALKNINVELVAC 292
           +V++I  G  H+A++ + G+V++WG    G+LGH V +++   P ++  ++N     VAC
Sbjct: 37  NVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVAC 96

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G +HT  VT +G +YTWG +    G LG G+  S   P  ++  L    V S++CG +HT
Sbjct: 97  GRNHTVVVTDNGLIYTWGENKA--GQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHT 154

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +   G ++++G    G LGHG+  +   P +V  +     +RAACG  HT  + +   
Sbjct: 155 VAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTD--- 211

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLG-HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                    + K++ WG    G+LG +   +A L P  V  L     C V CG+S ++AL
Sbjct: 212 ---------ANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMAL 262

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTE-- 528
                +YT G    GQLG           +   L    V++IACG D+ VA +    E  
Sbjct: 263 MKNEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPG 322

Query: 529 ------VYTWGKGANGRLGHGDTDDRNFPSLVE 555
                 VY+WG+G  G+LGH +   R  P +VE
Sbjct: 323 MPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 156/329 (47%), Gaps = 47/329 (14%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQN-----IACGGRH 244
           GDV+ WG    +G LG              D      +E  +V  ++N     +ACG  H
Sbjct: 55  GDVYTWGR-GWEGQLG-------------HDVVTEIELEPHIVPKMENRGSSAVACGRNH 100

Query: 245 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI-NVELVACGEHHTCAVTLS 303
             +VT  G +++WGE   G+LG G     + P LID+  N+ +V  +ACGE HT A+ + 
Sbjct: 101 TVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIE 160

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           G +++WG + C  G LGHGN  + + P ++ G  + I + + +CG  HT V+T A +++ 
Sbjct: 161 GTIWSWGRNQC--GQLGHGNTKTCYFPTQVVGMAKKICIRA-ACGGQHTLVLTDANKIYA 217

Query: 364 FGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +G   +G LG    D+ +V  P  VD L+        CG  H+ A+++            
Sbjct: 218 WGSNAYGQLGLNRSDK-AVLQPDIVDHLRRSGACHVLCGYSHSMALMK------------ 264

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT-------- 473
           + +++TWG  D G+LG G      VP  V AL      Q++CG+   VA           
Sbjct: 265 NEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMP 324

Query: 474 -TGHVYTMGSPVYGQLGDPKANGKLPTRV 501
              HVY+ G    GQLG  +   +   R+
Sbjct: 325 PLEHVYSWGRGEEGQLGHNELLSRCTPRI 353



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 76/159 (47%), Gaps = 6/159 (3%)

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEP----NFCQVSCGHSLTVALTTTGHVYTM 480
           +++WG    G+LG G      +PT + +L +P    N   +  G S +  +   G VYT 
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60

Query: 481 GSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           G    GQLG D     +L   +  K+       +ACG  H  V+T    +YTWG+   G+
Sbjct: 61  GRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQ 120

Query: 540 LGHGDTDDRNFPSLVE-ALKDKQVKSIVCGTSFTAAICL 577
           LG GD    N P L++ AL    V SI CG   T AIC+
Sbjct: 121 LGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICI 159


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 171/364 (46%), Gaps = 42/364 (11%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC- 292
           ++  I  G  H  ++T  G+VF+ G    G+ G G  + VSH   I  + + + +  A  
Sbjct: 596 EIIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYN 655

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           G  HT  V+  G + T G    N+ G LGHGN  S  +PK +   LE   V  VSC  +H
Sbjct: 656 GCEHTILVSTDGRVATCG---YNYRGQLGHGNTTSESVPKIIRS-LENKIVRLVSCSYYH 711

Query: 352 TAVVTSAGQL---FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           T +    G L   +TFG   +G LGH D I    P+ V++L   + V  ACG +HT  V 
Sbjct: 712 TVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVT 771

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC-QVSCGHSL 467
                       +SGK F +G  D G+LG    E +L P  V   +E   C ++ CG+  
Sbjct: 772 ------------ASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYH 819

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANG----------------KLPTRVEGKLTKNFVE 511
           T+AL +  H++  G   YGQLG  ++N                 +L   +EGK     + 
Sbjct: 820 TIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGK----DIV 875

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            IACG YH   ++    +Y +G+  +G+LG GDT +R +P  ++    K+V  +  G   
Sbjct: 876 RIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYH 935

Query: 572 TAAI 575
           T  +
Sbjct: 936 TVVL 939



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 158/339 (46%), Gaps = 30/339 (8%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV+S G+   G LGHG  +     + I AL+   +  +  G  HT  +T  G ++T G +
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 622

Query: 313 N---CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           +   C  G     + +S  +PK  +G  +  H  +   G  HT +V++ G++ T G    
Sbjct: 623 DNGQCGQGGTARVSHLS-EIPKMDSGSSQA-HAYN---GCEHTILVSTDGRVATCGYNYR 677

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LGHG+  S S P+ + SL+       +C  +HT    E         + +   L+T+G
Sbjct: 678 GQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACE---------DGNLQNLYTFG 728

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
             D G+LGH D   R +P  V AL +     V+CG   T+ +T +G  +  G   YGQLG
Sbjct: 729 RNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLG 788

Query: 490 -DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD-- 546
            D   N   P +V G L +    EI CG YH   L S   ++ +G+   G+LG G ++  
Sbjct: 789 IDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNAS 848

Query: 547 --------DRNFPS--LVEALKDKQVKSIVCGTSFTAAI 575
                    + F +  L++ L+ K +  I CG   T A+
Sbjct: 849 STSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAV 887



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           G  H  LV+  G V + G    G+LGHG  +  S PK+I +L+N  V LV+C  +HT   
Sbjct: 656 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 715

Query: 301 TLSG---DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              G   ++YT+G +  ++G LGH + +   +P+ +   L    + SV+CG +HT VVT+
Sbjct: 716 CEDGNLQNLYTFGRN--DYGQLGHNDSIDRKIPQFVEA-LSDQQIVSVACGQYHTMVVTA 772

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVD-SLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
           +G+ F FG   +G LG     +   P +V   L+    +   CG +HT A+         
Sbjct: 773 SGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIAL--------- 823

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT------------CVAALVEPNFCQVSCG 464
              CS   LF +G  D G+LG G   A                  +  L   +  +++CG
Sbjct: 824 ---CSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACG 880

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHV 520
              T+A++  G +Y  G   +GQLG     G    RV      +FV +    +A G YH 
Sbjct: 881 CYHTIAVSDNGVMYVFGRNNHGQLG----TGDTTERVYPFPIDDFVGKRVALVAAGFYHT 936

Query: 521 AVLT 524
            VLT
Sbjct: 937 VVLT 940



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 14/201 (6%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPK 277
           +D  +P+ VE+     + ++ACG  H  +VT  G+ F++G+   G+LG   +++ ++  +
Sbjct: 741 IDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQ 800

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-----------EMS 326
           +   L+      + CG +HT A+     ++ +G ++  +G LG G            +  
Sbjct: 801 VRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRND--YGQLGLGRSNASSTSNLQLQQQ 858

Query: 327 LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
            +   +L   LEG  +  ++CG +HT  V+  G ++ FG    G LG GD      P  +
Sbjct: 859 RFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPI 918

Query: 387 DSLKGLRTVRAACGVWHTAAV 407
           D   G R    A G +HT  +
Sbjct: 919 DDFVGKRVALVAAGFYHTVVL 939



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 9/158 (5%)

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           ++++ G    G LGHGD  +R     + AL +    Q+  G+  TV LT  G V+T G  
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 622

Query: 484 VYGQLGDPKAN-----GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
             GQ G           ++P    G    +       G  H  ++++   V T G    G
Sbjct: 623 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYN----GCEHTILVSTDGRVATCGYNYRG 678

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
           +LGHG+T   + P ++ +L++K V+ + C    T   C
Sbjct: 679 QLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLAC 716


>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
           magnipapillata]
          Length = 896

 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 174/356 (48%), Gaps = 36/356 (10%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN--INVELVACGEH 295
           IACG  H A VT   E+++WG+E GGR  +  ++ +  P  ++ L N  I V  VACGE 
Sbjct: 450 IACGRNHIAFVTNNKELYTWGKECGGRKDNVQNTCL--PMRMENLHNQGIQVVSVACGEF 507

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           HT A+   G +Y+WG +   +G LG G+  + + P  L   +    + SV CG +HT  +
Sbjct: 508 HTIALCEEG-VYSWGSNE--YGQLGVGDTRTRYRPV-LITHISSKQIVSVVCGAYHTLAI 563

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           TS  +++++G G  G LG     +  TP+++D L   + ++AA G  H+A +        
Sbjct: 564 TSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLT------- 616

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                S   ++T+G    G+LG G    +++P  V +L   +   +SCG   T+A++   
Sbjct: 617 -----SQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQ 671

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----------------VEEIACGDYH 519
            ++  G   +      KA      R     TK+                 + +I CG++H
Sbjct: 672 TIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWH 731

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             +LTS  +VYTWG    G+LGH +  D++ P LV+AL  + +  +  G  F+ A 
Sbjct: 732 YIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAF 787



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 30/248 (12%)

Query: 205 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 264
           G G+H       V+ +   PK ++      V   A G  H+A++T Q  V+++G +L G+
Sbjct: 573 GWGVHGQLGLKSVE-NQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLYGQ 631

Query: 265 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG---- 320
           LG G       P+L+D+L   ++ L++CG   T A++    ++ WG +   F +      
Sbjct: 632 LGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAES 691

Query: 321 --HGNEMS--------LWLPKKLNGPLEGIH-VSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
             +G +M+         + P+ L   L+  H ++ + CG WH  ++TS  Q++T+G    
Sbjct: 692 SKYGRKMASNTKDLNHRFYPETLQFQLQ--HPITQIFCGNWHYIILTSVNQVYTWGYNDC 749

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LGH ++I  S PR V +L  +R  RA  GV   A   E  V   +  N     +  WG
Sbjct: 750 GQLGHYNKIDQSAPRLVKAL--IR--RAIIGV---AVGAEFSVAFDADDN-----IMAWG 797

Query: 430 DGDRGRLG 437
             D G++G
Sbjct: 798 RNDEGKIG 805



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 33/272 (12%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           + ++ CG  H   +T   +V+SWG  + G+LG     +   PK ID L +  V   A G 
Sbjct: 550 IVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGY 609

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEGIHVSSVSCGPWHTA 353
            H+  +T    +YT+G     +G LG G+     +P+ ++   L+ I++  +SCGP+ T 
Sbjct: 610 AHSAVLTSQRYVYTFGAD--LYGQLGIGSHYKQVIPQLVDSLTLDSIYL--ISCGPFETI 665

Query: 354 VVTSAGQLFTFGDG--TFGVLG------HGDRISVST--------PREVDSLKGLRTVRA 397
            ++    +F +G     F +        +G +++ +T        P  +         + 
Sbjct: 666 AISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQI 725

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
            CG WH   +  V             +++TWG  D G+LGH +K  +  P  V AL+   
Sbjct: 726 FCGNWHYIILTSV------------NQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRA 773

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
              V+ G   +VA     ++   G    G++G
Sbjct: 774 IIGVAVGAEFSVAFDADDNIMAWGRNDEGKIG 805



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 35/213 (16%)

Query: 375 GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRG 434
            D +  STPR           R ACG  H A V             ++ +L+TWG    G
Sbjct: 438 NDLLFTSTPR----------ARIACGRNHIAFVT------------NNKELYTWGKECGG 475

Query: 435 RLGHGDKEARLVPTCVAALVE------PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           R      +  +  TC+   +E           V+CG   T+AL   G VY+ GS  YGQL
Sbjct: 476 R------KDNVQNTCLPMRMENLHNQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQL 528

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
           G      +    +   ++   +  + CG YH   +TS  +VY+WG G +G+LG    +++
Sbjct: 529 GVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQ 588

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAICLHKWV 581
             P  ++ L   +V     G + +A +   ++V
Sbjct: 589 LTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYV 621


>gi|147803323|emb|CAN75476.1| hypothetical protein VITISV_017798 [Vitis vinifera]
          Length = 230

 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 85/97 (87%)

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
           +  LRT  +ACGVWHT AVV +MVG+ SSSNCSSGK FTWGD D+GR GHGDKEA+LVPT
Sbjct: 45  ISNLRTGISACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPT 104

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           CVAA ++PNFC+++CGHSLTVALTT+G+VYT+G P++
Sbjct: 105 CVAAPIDPNFCRIACGHSLTVALTTSGYVYTIGRPMH 141



 Score = 46.2 bits (108), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 12/87 (13%)

Query: 514 ACGDYH-VAVL-----------TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 561
           ACG +H VAV+            S  + +TWG    GR GHGD + +  P+ V A  D  
Sbjct: 54  ACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPTCVAAPIDPN 113

Query: 562 VKSIVCGTSFTAAICLHKWVSGVDQSM 588
              I CG S T A+    +V  + + M
Sbjct: 114 FCRIACGHSLTVALTTSGYVYTIGRPM 140



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           G+ F+WG+   GR GHG       P  + A  + N   +ACG   T A+T SG +YT G
Sbjct: 79  GKPFTWGDSDKGRFGHGDKEAKLVPTCVAAPIDPNFCRIACGHSLTVALTTSGYVYTIG 137



 Score = 39.7 bits (91), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 15/96 (15%)

Query: 282 LKNINVELVACGEHHTCAVT------------LSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
           + N+   + ACG  HT AV              SG  +TWG S  + G  GHG++ +  +
Sbjct: 45  ISNLRTGISACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDS--DKGRFGHGDKEAKLV 102

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           P  +  P++  +   ++CG   T  +T++G ++T G
Sbjct: 103 PTCVAAPIDP-NFCRIACGHSLTVALTTSGYVYTIG 137


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 118/349 (33%), Positives = 174/349 (49%), Gaps = 30/349 (8%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           +V+  ACG RH+ L+   G V S G+   G+LG         P LI AL+ + V LV+CG
Sbjct: 22  EVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCG 81

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           + H+ AV   G ++ WG GS    G+     +  ++ PKK+   L GI +  VSCG +H+
Sbjct: 82  KEHSLAVCHKGRVFAWGAGSEGQLGI--EECKEKIFTPKKIK-TLTGIKIIQVSCGHYHS 138

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             ++  GQ++++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+    
Sbjct: 139 LALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---- 194

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                     SG  F WG  + G+L   G+     R  P  + AL   +   +SCG+  T
Sbjct: 195 --------SLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHT 246

Query: 469 VALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSR 526
             LT  G V+T G    GQLG +P A  + P +VEG      V +I CG YH +A + + 
Sbjct: 247 AVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEG--IDGLVSQIDCGSYHTLAYVYTT 304

Query: 527 TEVYTWGKGAN--GRLGHGDTDDRNF--PSLVEA--LKDKQVKSIVCGT 569
            EV ++G+G N      H +    NF    L+ A  L D QVK I  GT
Sbjct: 305 GEVVSFGRGRNCASSPTHSEAQMENFDMSCLISANDLVDVQVKHIFAGT 353



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 136/274 (49%), Gaps = 23/274 (8%)

Query: 154 RTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGS 213
           R G +K L  +T  V L S     S    H      G VF WG    +G LG        
Sbjct: 63  RPGLIKAL--ETLLVGLVSCGKEHSLAVCHK-----GRVFAWG-AGSEGQLG-------- 106

Query: 214 YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SD 272
               K   F PK +++   + +  ++CG  H+  +++ G+V+SWG+   G+LG G +   
Sbjct: 107 IEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPS 166

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMSLWLPK 331
            + P+ + +L+ I +  VA G  H+ A++LSG  + WG +N     L G+   +  + P 
Sbjct: 167 QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPH 226

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
            + G L+ + V  +SCG  HTAV+T  G++FTFGD + G LG+        P++V+ + G
Sbjct: 227 SI-GALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEGIDG 285

Query: 392 LRTVRAACGVWHTAAVVEV---MVGSSSSSNCSS 422
           L + +  CG +HT A V     +V      NC+S
Sbjct: 286 LVS-QIDCGSYHTLAYVYTTGEVVSFGRGRNCAS 318



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  V   +CG  H+ ++ S G + + GD T G LG   +     P  + +L+ L     +
Sbjct: 20  GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVS 79

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG  + KE    P  +  L    
Sbjct: 80  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIK 127

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+  G VY+ G    GQLG  K   + P++   +  ++     + ++
Sbjct: 128 IIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 184

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG    G+L   G+     R  P  + ALK   V  I CG  
Sbjct: 185 AAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYE 244

Query: 571 FTAAI 575
            TA +
Sbjct: 245 HTAVL 249



 Score = 40.0 bits (92), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V + ACG+ H  +L S   V++ G    G+LG         P L++AL+   V  + CG 
Sbjct: 23  VRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCGK 82

Query: 570 SFTAAICLHK 579
             + A+C HK
Sbjct: 83  EHSLAVC-HK 91


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 179/368 (48%), Gaps = 32/368 (8%)

Query: 192 VFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +F WG  T  G LG GGI           + F+P+ V+     +V+ IACG  +   +TK
Sbjct: 1   MFCWGS-TIHGELGLGGIEDE--------NIFMPREVDFIEASNVEQIACGENYTVAITK 51

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           +G+V+S G    G+LGH  +      +LI  L       +ACG  HT AV   G +++WG
Sbjct: 52  EGKVYSCGNNDYGQLGH--EKARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWG 109

Query: 311 GSNCNF-GLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
              CN  G LG  + + +  +P+ +      + +  ++CG  H+  +T+ G+L+ +G   
Sbjct: 110 ---CNMNGQLGLNSVDCTERVPRMIKVLGTNV-IVQIACGTEHSIALTNDGELYAWGSNR 165

Query: 369 FGVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            G LG G   +    P+ + +L  +     ACG +HT  + +            SG +F+
Sbjct: 166 EGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISK------------SGAVFS 213

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG    G+LG  D + R +P  +  L     C  +CG   +V LT  G V+T G+ +YGQ
Sbjct: 214 WGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQ 273

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG      ++  R   +L  + V +I+CG  H +A++ SR  VY WG G  G+LG+  + 
Sbjct: 274 LGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQ 333

Query: 547 DRNFPSLV 554
               P +V
Sbjct: 334 SATTPQVV 341



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 152/327 (46%), Gaps = 23/327 (7%)

Query: 254 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +F WG  + G LG G   D ++  P+ +D ++  NVE +ACGE++T A+T  G +Y+ G 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCG- 59

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
            N ++G LGH          +L   L+      ++CG  HT  V   GQLF++G    G 
Sbjct: 60  -NNDYGQLGHEKARK---RLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQ 115

Query: 372 LG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
           LG +    +   PR +  L     V+ ACG  H+ A+             + G+L+ WG 
Sbjct: 116 LGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALT------------NDGELYAWGS 163

Query: 431 GDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
              G+LG G      + P  ++ L       ++CG   T+ ++ +G V++ G   +GQLG
Sbjct: 164 NREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLG 223

Query: 490 DPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
                 + LP ++   L    V    CG+     LT    V+T G G  G+LGHG+T + 
Sbjct: 224 LNDVQQRNLPCQLR-TLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNE 282

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
             P  V  L    V  I CG   T A+
Sbjct: 283 ILPRQVMELMGSTVTQISCGKRHTLAL 309



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 21/276 (7%)

Query: 306 MYTWGGS-NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           M+ WG + +   GL G  +E ++++P++++  +E  +V  ++CG  +T  +T  G++++ 
Sbjct: 1   MFCWGSTIHGELGLGGIEDE-NIFMPREVDF-IEASNVEQIACGENYTVAITKEGKVYSC 58

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G+  +G LGH    +    + +  L      + ACG  HT AV E             G+
Sbjct: 59  GNNDYGQLGHEK--ARKRLQLIPGLDAFVFRKIACGNCHTLAVNE------------WGQ 104

Query: 425 LFTWGDGDRGRLGHGDKEA-RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           LF+WG    G+LG    +    VP  +  L      Q++CG   ++ALT  G +Y  GS 
Sbjct: 105 LFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSN 164

Query: 484 VYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
             GQLG          P R+   L    +  IACG YH  V++    V++WG+   G+LG
Sbjct: 165 REGQLGLGSYTTTEIKPKRI-STLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLG 223

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
             D   RN P  +  L++ +V    CG  F+  + +
Sbjct: 224 LNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTM 259


>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 1166

 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 186/396 (46%), Gaps = 42/396 (10%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           V++WG  T  G LG      G           P+    +VV  +++IACG  H + + + 
Sbjct: 36  VYVWGSDTY-GQLGLASREFGKSCPS------PRFTSFSVV--IEDIACGEEHTSFIAQN 86

Query: 252 GEVFSWGEELGGRLGHGVDSDV--SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           G V+S G    G+LG  VD     S P L++ LK      ++CG +HT  V  +G ++TW
Sbjct: 87  GYVYSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTW 146

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            G NC  G LG G   ++  P+ ++  L+      VSCG  +T V+T   ++F FGDG  
Sbjct: 147 -GQNCE-GQLGIGKSDNMTTPQIVD--LKNNLAVFVSCGKRNTMVITQTQKIFGFGDGKC 202

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LG G+  +   PR++  ++    V  +CG  HT  + E             G+ F+ G
Sbjct: 203 GQLGLGNECNEYKPRQL-QIQMQNIVAISCGDRHTLFLNE------------EGEAFSCG 249

Query: 430 DGDRGRLG-HGDKEARLVPTCVAALVEPNFCQVSCGHS-LTVALTTTGHVYTMGSPVYGQ 487
           +    +LG   + ++  +P  V       F +V   ++ ++ AL++ G++Y  G+  +GQ
Sbjct: 250 NNTYNQLGCANNSQSSNIPVKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGTGFFGQ 309

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
                     PTR E       + +I  G+  + +L    +VY+WG    G LG G  + 
Sbjct: 310 FD-------RPTRCE--FAPKDLLDICIGNQFICLLDGEGKVYSWGSNMFGELGQGIANG 360

Query: 548 RNF--PSLVEALKDKQVKSIVCGTSFTAAICLHKWV 581
           +    P  V+ +KDK VK + CG +F  A+    W+
Sbjct: 361 QQALEPIQVDKIKDKNVKRLYCGANFVFAMG-ENWI 395



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 14/173 (8%)

Query: 425 LFTWGDGDRGRLGHGDKE-ARLVP----TCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
           ++ WG    G+LG   +E  +  P    T  + ++E     ++CG   T  +   G+VY+
Sbjct: 36  VYVWGSDTYGQLGLASREFGKSCPSPRFTSFSVVIED----IACGEEHTSFIAQNGYVYS 91

Query: 480 MGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           MG+   GQLG   D       PT VEG L      +I+CG YH A +    +++TWG+  
Sbjct: 92  MGNNNQGQLGVSVDESYYKSAPTLVEG-LKGYKAVQISCGAYHTATVCDNGQLFTWGQNC 150

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMC 589
            G+LG G +D+   P +V+ LK+     + CG   T  I   + + G     C
Sbjct: 151 EGQLGIGKSDNMTTPQIVD-LKNNLAVFVSCGKRNTMVITQTQKIFGFGDGKC 202


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 195/409 (47%), Gaps = 36/409 (8%)

Query: 192 VFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           ++ WG  T  G LG GGI              VP+ ++ +   +V  + CG  H   +TK
Sbjct: 3   IYCWGN-TAHGELGLGGIEEE--------QVMVPRKMDWSQADEVVRVECGTSHTLFLTK 53

Query: 251 QGEVFSWGEELGGRLGHGVDS------DVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
           +G++++ G    G+LGH +D+       +S  K + +L+N  +  ++CG  H+ A+T  G
Sbjct: 54  EGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWG 113

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            +++WG +    G LGH  E       ++   +   HV  ++ G +H   +T+ G+L+ +
Sbjct: 114 QVFSWGSNAV--GQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAW 171

Query: 365 GDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           G  ++G LG G     V  P  + SL G+     ACG  H+ AV              SG
Sbjct: 172 GSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAV------------SKSG 219

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            +F WG    G+LG  D  +R  PT +  L       +SCG   +V LT  G V+T G+ 
Sbjct: 220 AIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAG 279

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGH 542
            +GQLG    + ++  R   +L  + + +IACG  H +A + SR ++Y +G G  G+LG 
Sbjct: 280 TFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGI 339

Query: 543 GDTDDRNFPSLVEALKDK-QVKSIVCGTSFTAAICLHKWVSGVDQSMCS 590
           G   + + P +V     K   KS  C  +    I +++  SG DQ   S
Sbjct: 340 GMVGNHSTPQIVRGPWFKTDFKSSDCDET---QIIVNRIFSGGDQCFVS 385


>gi|440790501|gb|ELR11783.1| RasGEF domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 2063

 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/320 (35%), Positives = 169/320 (52%), Gaps = 40/320 (12%)

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
           V S   + +  +ACG  H A ++ +G +F+WG    GRLGHG ++D + P+L+  L N N
Sbjct: 3   VASLRRIKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTN 62

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP--LEGI---- 340
           +  VA GE HT A + +G++Y+WG  + NFG+LGHG E+    P+    P  +E +    
Sbjct: 63  IVGVALGERHTAAFSETGELYSWG--DANFGVLGHG-ELQEGDPQIQTTPKLIEYLSRVL 119

Query: 341 --HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD---RISVSTPREVDSLKGLRTV 395
              V+ V+CG +HT   T+    + +GDG  GVLG G    R    TP+ + +L G    
Sbjct: 120 RKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSIGALAGRGVQ 179

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
           + ACG  H A +++            +G L+TWG+G  GRLGHGD+E    P  VA+L  
Sbjct: 180 QIACGWAHCAVLMD------------TGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRG 227

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--------DPK----ANGKLPTRVEG 503
               Q++CG +   AL+  G V+  G+   G+LG        +P+    AN K+P RVE 
Sbjct: 228 TRIVQIACGFAHMAALSDKGEVFVCGTGC-GRLGLDGEQGKSNPEHTEVANQKIPRRVE- 285

Query: 504 KLTKNFVEEIACGDYHVAVL 523
            L    + ++ACG     VL
Sbjct: 286 PLRGLQILQVACGMISTIVL 305



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/251 (36%), Positives = 125/251 (49%), Gaps = 25/251 (9%)

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
           L  I +S V+CG  HTA +++ G LFT+G G +G LGHGD    + PR V  L     V 
Sbjct: 6   LRRIKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTNIVG 65

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG-----DKEARLVPTCVA 451
            A G  HTAA  E            +G+L++WGD + G LGHG     D + +  P  + 
Sbjct: 66  VALGERHTAAFSE------------TGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIE 113

Query: 452 AL---VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL----PTRVEGK 504
            L   +      V+CG   T+  T     Y  G   +G LG     G+     P  + G 
Sbjct: 114 YLSRVLRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSI-GA 172

Query: 505 LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKS 564
           L    V++IACG  H AVL    ++YTWG+GA GRLGHGD +D   P  V +L+  ++  
Sbjct: 173 LAGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQ 232

Query: 565 IVCGTSFTAAI 575
           I CG +  AA+
Sbjct: 233 IACGFAHMAAL 243



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 154/321 (47%), Gaps = 42/321 (13%)

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           + +L+ I +  VACG  HT A++  G ++TWG     +G LGHG+E     P +L G L 
Sbjct: 3   VASLRRIKISRVACGWSHTAAISAKGLLFTWGMG--RYGRLGHGDETDQNAP-RLVGELL 59

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH-----GDRISVSTPREVDSLKGL- 392
             ++  V+ G  HTA  +  G+L+++GD  FGVLGH     GD    +TP+ ++ L  + 
Sbjct: 60  NTNIVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIEYLSRVL 119

Query: 393 --RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL-FTWGDGDRGRLGHGDKEARLV--- 446
             +    ACG +HT                ++ KL + WGDG  G LG G    R +   
Sbjct: 120 RKKVTHVACGAYHTLCT-------------TADKLTYIWGDGGHGVLGQGGDFGRTIEWT 166

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKL 505
           P  + AL      Q++CG +    L  TG +YT G    G+LG   + + K P +V   L
Sbjct: 167 PQSIGALAGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQV-ASL 225

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG-----------HGDTDDRNFPSLV 554
               + +IACG  H+A L+ + EV+  G G  GRLG           H +  ++  P  V
Sbjct: 226 RGTRIVQIACGFAHMAALSDKGEVFVCGTGC-GRLGLDGEQGKSNPEHTEVANQKIPRRV 284

Query: 555 EALKDKQVKSIVCGTSFTAAI 575
           E L+  Q+  + CG   T  +
Sbjct: 285 EPLRGLQILQVACGMISTIVL 305



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 138/299 (46%), Gaps = 32/299 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F WG         G   R G   G + D   P+ V   +  ++  +A G RH A  +
Sbjct: 28  GLLFTWG--------MGRYGRLGH--GDETDQNAPRLVGELLNTNIVGVALGERHTAAFS 77

Query: 250 KQGEVFSWGEELGGRLGHGV----DSDV-SHPKLIDALKNI---NVELVACGEHHTCAVT 301
           + GE++SWG+   G LGHG     D  + + PKLI+ L  +    V  VACG +HT   T
Sbjct: 78  ETGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIEYLSRVLRKKVTHVACGAYHTLCTT 137

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
                Y WG         G     ++ W P+ + G L G  V  ++CG  H AV+   G 
Sbjct: 138 ADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSI-GALAGRGVQQIACGWAHCAVLMDTGD 196

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV---EVMVGSSSS 417
           L+T+G+G  G LGHGD      P +V SL+G R V+ ACG  H AA+    EV V     
Sbjct: 197 LYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQIACGFAHMAALSDKGEVFV----- 251

Query: 418 SNCSSGKLFTWGDGDRGRLG--HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
             C +G      DG++G+    H +   + +P  V  L      QV+CG   T+ L  T
Sbjct: 252 --CGTGCGRLGLDGEQGKSNPEHTEVANQKIPRRVEPLRGLQILQVACGMISTIVLQNT 308



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 99/215 (46%), Gaps = 29/215 (13%)

Query: 385 EVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR 444
           +V SL+ ++  R ACG  HTAA+             + G LFTWG G  GRLGHGD+  +
Sbjct: 2   QVASLRRIKISRVACGWSHTAAI------------SAKGLLFTWGMGRYGRLGHGDETDQ 49

Query: 445 LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG-------QLGDPKANGKL 497
             P  V  L+  N   V+ G   T A + TG +Y+ G   +G       Q GDP+     
Sbjct: 50  NAPRLVGELLNTNIVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTT- 108

Query: 498 PTRVE--GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF---PS 552
           P  +E   ++ +  V  +ACG YH    T+    Y WG G +G LG G    R     P 
Sbjct: 109 PKLIEYLSRVLRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQ 168

Query: 553 LVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
            + AL  + V+ I CG +  A +     L+ W  G
Sbjct: 169 SIGALAGRGVQQIACGWAHCAVLMDTGDLYTWGEG 203


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 20/320 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+++ CG RH   V   G V++ G    G+LGH  +     P+ + AL   N+  V+CGE
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKRPEQVGALDAQNIVAVSCGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT  +   G +Y WG  ++   GL   G E    +P+ +   L  + +  V+CG +H+ 
Sbjct: 94  AHTLTLNDKGQVYAWGFAADGQLGL--PGTEEYTRVPRNIKS-LSDVQIVQVACGYYHSL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            ++   ++F++G    G LG G D    ++P+ + SL G+   + A G            
Sbjct: 151 ALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG    G+LG  D+  R VP  + +L       +SCG   T ALT
Sbjct: 199 GAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT-EVYT 531
             G V+T G+  YGQLG      ++  R   +L  N V +IACG  H +     T  +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYS 318

Query: 532 WGKGANGRLGHGDTDDRNFP 551
           +G G NG+LG G T +R  P
Sbjct: 319 FGLGGNGQLGMGSTSNRKSP 338



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 158/330 (47%), Gaps = 27/330 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSDVS-HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D +V   P+  +   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++ G L+  ++ +VSCG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKRPEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+ G  +   V  PR + SL  ++ V+ ACG +H+ A+                ++F+
Sbjct: 115 QLGLPGTEEYTRV--PRNIKSLSDVQIVQVACGYYHSLAL------------SKGSEVFS 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F Q++ G + + ALT +G V+  G   +G
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I+CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
               P  V  L    V  I CG   T+A  
Sbjct: 281 HEINPRKVFELMGNIVTQIACGRQHTSAFV 310



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 132/262 (50%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG          G +  + VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWG-FAADGQLG--------LPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVFSWG+   G+LG G D    + P+LI +L  I    +A G  H+ A+TLSG ++ 
Sbjct: 154 KGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E   ++P  L   L    +  +SCG  HTA +T  G +FTFG G 
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    + ACG  HT+A V            S+G+++++
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVP-----------STGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGMGSTSNRKSPFPV 341



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 138/287 (48%), Gaps = 20/287 (6%)

Query: 225 KAVESAVVLDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLID 280
           K  E    LD QNI   +CG  H   +  +G+V++WG    G+LG  G +     P+ I 
Sbjct: 73  KRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIK 132

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
           +L ++ +  VACG +H+ A++   ++++WG +    G LG G ++      +L   L GI
Sbjct: 133 SLSDVQIVQVACGYYHSLALSKGSEVFSWGQN--KHGQLGLGYDLKKQTSPQLIKSLLGI 190

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
               ++ G  H+  +T +G +F +G   FG LG  D      P  + SL+  + V  +CG
Sbjct: 191 PFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCG 250

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             HTAA+ +             G +FT+G G  G+LGH      + P  V  L+     Q
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQ 298

Query: 461 VSCGHSLTVALT-TTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKL 505
           ++CG   T A   +TG +Y+ G    GQLG    +N K P  V+G  
Sbjct: 299 IACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 20/320 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+++ CG RH   V   G V++ G    G+LGH  +     P+ + AL   N+  V+CGE
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKRPEQVGALDAQNIVAVSCGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT  +   G +Y WG  ++   GL   G E    +P+ +   L  + +  V+CG +H+ 
Sbjct: 94  AHTLTLNDKGQVYAWGFAADGQLGL--PGTEEYTRVPRNIKS-LSDVQIVQVACGYYHSL 150

Query: 354 VVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            ++   ++F++G    G LG G D    ++P+ + SL G+   + A G            
Sbjct: 151 ALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAG------------ 198

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
           G+ S +   SG +F WG    G+LG  D+  R VP  + +L       +SCG   T ALT
Sbjct: 199 GAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT-EVYT 531
             G V+T G+  YGQLG      ++  R   +L  N V +IACG  H +     T  +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYS 318

Query: 532 WGKGANGRLGHGDTDDRNFP 551
           +G G NG+LG G T +R  P
Sbjct: 319 FGLGGNGQLGMGSTSNRKSP 338



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 158/330 (47%), Gaps = 27/330 (8%)

Query: 254 VFSWGEELGGRLGHG-VDSDVS-HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D +V   P+  +   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++ G L+  ++ +VSCG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKRPEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G+ G  +   V  PR + SL  ++ V+ ACG +H+ A+                ++F+
Sbjct: 115 QLGLPGTEEYTRV--PRNIKSLSDVQIVQVACGYYHSLAL------------SKGSEVFS 160

Query: 428 WGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G D + +  P  + +L+   F Q++ G + + ALT +G V+  G   +G
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFG 220

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           QLG    N +    +   L    +  I+CG+ H A LT    V+T+G G  G+LGH  T 
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
               P  V  L    V  I CG   T+A  
Sbjct: 281 HEINPRKVFELMGNIVTQIACGRQHTSAFV 310



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 132/262 (50%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG          G +  + VP+ ++S   + +  +ACG  H+  ++
Sbjct: 103 GQVYAWG-FAADGQLG--------LPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVFSWG+   G+LG G D    + P+LI +L  I    +A G  H+ A+TLSG ++ 
Sbjct: 154 KGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFG 213

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E   ++P  L   L    +  +SCG  HTA +T  G +FTFG G 
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    + ACG  HT+A V            S+G+++++
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVP-----------STGRIYSF 319

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 320 GLGGNGQLGMGSTSNRKSPFPV 341



 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 138/287 (48%), Gaps = 20/287 (6%)

Query: 225 KAVESAVVLDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLID 280
           K  E    LD QNI   +CG  H   +  +G+V++WG    G+LG  G +     P+ I 
Sbjct: 73  KRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIK 132

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
           +L ++ +  VACG +H+ A++   ++++WG +    G LG G ++      +L   L GI
Sbjct: 133 SLSDVQIVQVACGYYHSLALSKGSEVFSWGQN--KHGQLGLGYDLKKQTSPQLIKSLLGI 190

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
               ++ G  H+  +T +G +F +G   FG LG  D      P  + SL+  + V  +CG
Sbjct: 191 PFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCG 250

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             HTAA+ +             G +FT+G G  G+LGH      + P  V  L+     Q
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQ 298

Query: 461 VSCGHSLTVALT-TTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKL 505
           ++CG   T A   +TG +Y+ G    GQLG    +N K P  V+G  
Sbjct: 299 IACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   +A   D Q I  G     +++ 
Sbjct: 383 EVYVWGSNSSHQLV----------EGTQEKILQPKL--AATFADAQTIEAGQYCTFVISS 430

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    +  ++ V+     + HT A T  G+++
Sbjct: 431 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 490

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A V+  G+L+T+G+G
Sbjct: 491 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 548

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 549 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 595

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  V AL      +V  G   ++ALT+TG VY  G      
Sbjct: 596 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 655

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    V +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 656 CGSSEATALRPKLIE-ELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 714

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 715 PITKPKKVVGLDGVAIQQISAGTSHSLA 742



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 155/304 (50%), Gaps = 36/304 (11%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V++S G
Sbjct: 378 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAATFADA---QTIEAGQYCTFVISSDG 432

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVGSSS 416
            +   G G++G LG GD  + ST +++  +  + ++ V ++ G   HT A          
Sbjct: 433 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFT-------- 484

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTTTG 475
               + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A++  G
Sbjct: 485 ----TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDG 540

Query: 476 HVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVYTW 532
            +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+++
Sbjct: 541 ELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VWSF 596

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSM 588
           G G NG+LGHGDT+    P +VEAL+   ++ +  G+  + A+     ++ W  G     
Sbjct: 597 GGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA---- 652

Query: 589 CSGC 592
           C GC
Sbjct: 653 CLGC 656



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK VE+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 613 YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 670

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    V  ++ G+ H  A++   ++Y WG  N + G  G GN    +  PKK+ G L+G
Sbjct: 671 ELATTRVVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVVG-LDG 727

Query: 340 IHVSSVSCGPWHTAVVTS 357
           + +  +S G  H+   T+
Sbjct: 728 VAIQQISAGTSHSLAWTA 745


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 216/491 (43%), Gaps = 102/491 (20%)

Query: 171 SSAVSSSSQGSGHDDGDSLGD-----VFIWGECT-GDGILGGGIHRSGSYAGVKMDSFVP 224
           SS +SS S+  G +    +       VF++G+ + G+  LG    RS           +P
Sbjct: 15  SSYISSYSRTEGVNGNQKISGTGAPLVFVFGQNSYGELGLGDVQERS-----------IP 63

Query: 225 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN 284
             V     ++V  IA G  H A++T+ G+V + G    G+LGHG +  +S PK I++LKN
Sbjct: 64  SQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSGQLGHGNNKSISTPKKIESLKN 123

Query: 285 INVELV--ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           I +  +  A G  +   ++  G +YT G +  N+G LGHG + +L  P  L   L+   V
Sbjct: 124 IRITHISSANGCENLAIISQDGKLYTCGYN--NYGQLGHGTQSNLSTP-TLVQALKDTQV 180

Query: 343 SSVSCGPWHTAVVTSAGQ--------LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
           ++VSC  +H+ +VT   +        +++ G    G LG        TP+ + SL   + 
Sbjct: 181 TNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQV 240

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
           ++ ACG+ H+  V               G++F+ G  D G+LGH D ++R  P  + +L 
Sbjct: 241 IQTACGLHHSVFVT------------VHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLK 288

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL---PTRVEGKLTKNFVE 511
                Q +CG+  T+    TG +Y  G    GQLG  + NG+    P +++  LT + ++
Sbjct: 289 NKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLG-IETNGQALIQPKQIQEFLTVSNIQ 347

Query: 512 -------EIACGDYH------------------------------VAVLTSRTEV----- 529
                  ++  G  H                              V  L+ +  +     
Sbjct: 348 HSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIAC 407

Query: 530 --------------YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                         +T+G+G +G+LG G+T+D+  P  V +L DK+V  I  G   T  +
Sbjct: 408 GCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVL 467

Query: 576 CLHKWVSGVDQ 586
              K V G+ Q
Sbjct: 468 VKQKKVKGISQ 478


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 173/355 (48%), Gaps = 25/355 (7%)

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG  + +G LG GI       G +    V K V +     VQ+I+CG  H  +V   G
Sbjct: 4   FCWGS-SMEGQLGIGI------TGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDG 56

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
            ++  G    G+LG   D +   P  + AL+ + ++ VACG+ HT AV+  G +  WG +
Sbjct: 57  TLYMCGANSKGQLGQ--DRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRN 114

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
           +     L  G+  +   P+ L   L       V CG  H+  +T  G+LF++GD T+G L
Sbjct: 115 DRGQCGLATGDIENKPRPRILK-HLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQL 173

Query: 373 GHGDRISVST--PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
           G G  ++  T  P E+ SL+G+  VR ACG +H+ A+              SG +F WG 
Sbjct: 174 GIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALT------------ISGSVFGWGK 221

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
            D G+LG G+KE +  PT +  +       ++CG   T  LT  G V+  G    GQLG 
Sbjct: 222 NDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGH 281

Query: 491 PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT-SRTEVYTWGKGANGRLGHGD 544
                ++  R    L  + + ++ CG +H  VL  S+  +Y +G+G +G+LG  +
Sbjct: 282 GSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDE 336



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 153/329 (46%), Gaps = 26/329 (7%)

Query: 255 FSWGEELGGRLGHGV---DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           F WG  + G+LG G+    +     K +  L    V+ ++CG+HHT  V   G +Y  G 
Sbjct: 4   FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           ++   G LG   + + + P +++  LE + +  V+CG  HT  V+  GQ+  +G    G 
Sbjct: 64  NSK--GQLGQ--DRNQYKPVQVSA-LETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQ 118

Query: 372 --LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
             L  GD  +   PR +  L   + V+  CG  H+ A+               G+LF+WG
Sbjct: 119 CGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTR------------DGRLFSWG 166

Query: 430 DGDRGRLGHGDKEARLV--PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           D   G+LG G         PT + +L      +V+CG   + ALT +G V+  G    GQ
Sbjct: 167 DNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQ 226

Query: 488 LG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG   K N   PT +   +    V+ IACG  H A+LT+   V+ +G+G+ G+LGHG   
Sbjct: 227 LGLGNKENKAYPTLLR-NMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNY 285

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +   P  V  L    +  + CG   T  +
Sbjct: 286 NEVNPRKVIDLMGSDITQVTCGKHHTLVL 314



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 16/266 (6%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+ + ++ VACG+ HT AV+    +  WG ++     L  G+  +   P+ L   L    
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILR-HLASYQ 482

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST--PREVDSLKGLRTVRAAC 399
              V CG  H+  +T  G+LF++GD T+G LG G  ++  T  P E+ SL+G+  VR AC
Sbjct: 483 FVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVAC 542

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           G +H+ A+              SG +F WG  D G+LG G+KE +  PT +  +      
Sbjct: 543 GGFHSFALT------------ISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVK 590

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
            ++CG   T  LT  G V+  G    GQLG      ++  R    L  + + ++ CG +H
Sbjct: 591 HIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHH 650

Query: 520 VAVLT-SRTEVYTWGKGANGRLGHGD 544
             VL  S+  +Y +G+G +G+LG  +
Sbjct: 651 TLVLEGSKGRLYAFGQGIHGQLGQDE 676



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 21/294 (7%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR--LGHGVDSDV 273
           G   + + P  V +   + ++++ACG  H   V+ +G+V  WG    G+  L  G   + 
Sbjct: 70  GQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENK 129

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL--PK 331
             P+++  L +     V CG  H+ A+T  G +++WG +   +G LG G  ++ +   P 
Sbjct: 130 PRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDN--TYGQLGIGTLVTNYTDRPT 187

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
           +L   L G+ +  V+CG +H+  +T +G +F +G    G LG G++ + + P  + +++ 
Sbjct: 188 ELTS-LRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRS 246

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
                 ACG  HTA +             + G +F +G G  G+LGHG     + P  V 
Sbjct: 247 QMVKHIACGQDHTAMLT------------ADGGVFLFGQGSEGQLGHGSNYNEVNPRKVI 294

Query: 452 ALVEPNFCQVSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPKANG-KLPTRVEG 503
            L+  +  QV+CG   T+ L  + G +Y  G  ++GQLG  +A     P RV G
Sbjct: 295 DLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPG 348



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 21/275 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGR--LGHGVDSDVSHPKLIDALKNINVELVAC 292
           ++++ACG  H   V+ + +V  WG    G+  L  G   +   P+++  L +     V C
Sbjct: 429 IKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCC 488

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL--PKKLNGPLEGIHVSSVSCGPW 350
           G  H+ A+T  G +++WG +   +G LG G  ++ +   P +L   L G+ +  V+CG +
Sbjct: 489 GSLHSMALTRDGRLFSWGDN--TYGQLGIGTLVTNYTDRPTELTS-LRGVPLVRVACGGF 545

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           H+  +T +G +F +G    G LG G++ + S P  + +++       ACG  HTA +   
Sbjct: 546 HSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLT-- 603

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                     + G +F +G G  G+LGHG     + P  V  L+  +  QV+CG   T+ 
Sbjct: 604 ----------ADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLV 653

Query: 471 LT-TTGHVYTMGSPVYGQLGDPKANG-KLPTRVEG 503
           L  + G +Y  G  ++GQLG  +A     P RV G
Sbjct: 654 LEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPG 688



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 114/223 (51%), Gaps = 18/223 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           P+ +          + CG  H+  +T+ G +FSWG+   G+LG G  V +    P  + +
Sbjct: 472 PRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTS 531

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+ + +  VACG  H+ A+T+SG ++ WG ++   G LG GN+ +   P  L   +    
Sbjct: 532 LRGVPLVRVACGGFHSFALTISGSVFGWGKNDV--GQLGLGNKENKSYPTLLRN-MRSQM 588

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  ++CG  HTA++T+ G +F FG G+ G LGHG   +   PR+V  L G    +  CG 
Sbjct: 589 VKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGK 648

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR 444
            HT     V+ G       S G+L+ +G G  G+LG    EAR
Sbjct: 649 HHTL----VLEG-------SKGRLYAFGQGIHGQLGQ--DEAR 678



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 173/412 (41%), Gaps = 49/412 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF++G+ + +G LG G     +Y  V      P+ V   +  D+  + CG  H  ++ 
Sbjct: 266 GGVFLFGQGS-EGQLGHG----SNYNEVN-----PRKVIDLMGSDITQVTCGKHHTLVLE 315

Query: 250 -KQGEVFSWGEELGGRLGHGVDSDVSHPKLI-------------DALKNINVELVACGEH 295
             +G ++++G+ + G+LG       S+P+ +              + K   V  +  G H
Sbjct: 316 GSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGH 375

Query: 296 H--TCAVTLSGD-----MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
           H  + A   + D     ++    +   F L                  LE + +  V+CG
Sbjct: 376 HCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACG 435

Query: 349 PWHTAVVTSAGQLFTFGDGTFGV--LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
             HT  V+   Q+  +G    G   L  GD  +   PR +  L   + V+  CG  H+ A
Sbjct: 436 DDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMA 495

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQVSCG 464
           +               G+LF+WGD   G+LG G         PT + +L      +V+CG
Sbjct: 496 LTR------------DGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACG 543

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
              + ALT +G V+  G    GQLG   K N   PT +   +    V+ IACG  H A+L
Sbjct: 544 GFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLR-NMRSQMVKHIACGQDHTAML 602

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           T+   V+ +G+G+ G+LGHG   +   P  V  L    +  + CG   T  +
Sbjct: 603 TADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 654



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 92/165 (55%), Gaps = 6/165 (3%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  + S   + +  +ACGG H+  +T  G VF WG+   G+LG G   + S+P L+  ++
Sbjct: 526 PTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMR 585

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +  V+ +ACG+ HT  +T  G ++ +G GS    G LGHG+  +   P+K+   L G  +
Sbjct: 586 SQMVKHIACGQDHTAMLTADGGVFLFGQGSE---GQLGHGSNYNEVNPRKVI-DLMGSDI 641

Query: 343 SSVSCGPWHTAVVT-SAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
           + V+CG  HT V+  S G+L+ FG G  G LG  +  S S P+ V
Sbjct: 642 TQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/334 (34%), Positives = 166/334 (49%), Gaps = 20/334 (5%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+A    +V D+  + CG  H  LV K G++FS+G    G+LGH      + P  +D L+
Sbjct: 25  PRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLE 82

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
             N+  VACG  HT A    G+++ WG SN N G LG   E S+    K+   L    V 
Sbjct: 83  AHNITQVACGAQHTLAQNEWGEVFAWG-SNSN-GQLGLNVEESMMPTPKMVKSLATKQVV 140

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST-PREVDSLKGLRTVRAACGVW 402
            ++CG  H+  +T+ G+++ +G  + G LG G   +  T P  V  L+G+     +CG  
Sbjct: 141 QIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGAD 200

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
            + AV              SG ++ WG    G+LG GD   R  PT + +L       + 
Sbjct: 201 FSFAVT------------PSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIR 248

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYH-V 520
           CG   T ALT  G V+T G+ +YGQLG    AN  LP +V  +L    V +I CG  H +
Sbjct: 249 CGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVL-ELMGTTVTQICCGRCHTL 307

Query: 521 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 554
           A + S+  +Y +G G +G+LG   T + N P LV
Sbjct: 308 AFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLV 341



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 122/241 (50%), Gaps = 26/241 (10%)

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           +  V CG  HT +V   G+LF+FG   +G LGH    + + P  VD L+     + ACG 
Sbjct: 36  IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLEAHNITQVACGA 93

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQ 460
            HT A  E             G++F WG    G+LG   +E+ +  P  V +L      Q
Sbjct: 94  QHTLAQNE------------WGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQ 141

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLG-----DPKANGKLPTRVEGKLTKNFVEEIAC 515
           ++CG S ++ALT  G +Y  GS  +GQLG      P+    L   ++G      +  I+C
Sbjct: 142 IACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIP----ISHISC 197

Query: 516 G-DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G D+  AV T    VY WGK + G+LG GDT DR  P+ +++L+ ++V  I CG   TAA
Sbjct: 198 GADFSFAV-TPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAA 256

Query: 575 I 575
           +
Sbjct: 257 L 257



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 138/289 (47%), Gaps = 21/289 (7%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           V CGE+HT  V   G ++++G ++  +G LGH    +   P  ++G LE  +++ V+CG 
Sbjct: 39  VGCGENHTILVMKDGKLFSFGLND--YGQLGHCRSRTRAEP--VDG-LEAHNITQVACGA 93

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            HT      G++F +G  + G LG + +   + TP+ V SL   + V+ ACG  H+ A+ 
Sbjct: 94  QHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALT 153

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE-PNFCQVSCGHSL 467
            V            G+++ WG    G+LG G         C+  L++      +SCG   
Sbjct: 154 NV------------GEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADF 201

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           + A+T +G VY  G   +GQLG      +  PT+++  L    V  I CG  H A LT  
Sbjct: 202 SFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKS-LRFQRVTYIRCGMDHTAALTRD 260

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             V+T+G G  G+LGH  + +   P  V  L    V  I CG   T A 
Sbjct: 261 GGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAF 309


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 169/334 (50%), Gaps = 18/334 (5%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P A   ++   V+ +ACGG+H   + + G+V+S G    G+LGH  +   +HP  +  L 
Sbjct: 25  PCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEG--THPAPVATLA 82

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
             +++ +ACG+ H+ A++L G++Y+WG  N   G LGH          ++   L    + 
Sbjct: 83  EEHIKHIACGQSHSLALSLQGNLYSWGAGND--GQLGHATVEHYSRIPRIIKKLSQQKIQ 140

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVW 402
            +SCG  H   +   GQLFT+G  T G LG G+  IS S+P++V SL+G+   +   G  
Sbjct: 141 QMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAG-- 198

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
                     GS S +   SG +F WG    G+LG  D++ +  P  V  L       +S
Sbjct: 199 ----------GSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYIS 248

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VA 521
           CG   T  LT  G ++T G+   GQLG    + ++  R   +L  + V +IACG  H +A
Sbjct: 249 CGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLA 308

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
            + S   +Y +G G  G+LG G  ++   P++V+
Sbjct: 309 FVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVVK 342



 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 136/274 (49%), Gaps = 27/274 (9%)

Query: 180 GSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNI 238
           G  H    SL G+++ WG    DG LG        +A V+  S +P+ ++      +Q +
Sbjct: 92  GQSHSLALSLQGNLYSWG-AGNDGQLG--------HATVEHYSRIPRIIKKLSQQKIQQM 142

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGR--LGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +CG  H   +   G++F+WG+   G+  LG+G  S  S P+ + +L+ I +  V  G  H
Sbjct: 143 SCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQ-SSPQKVKSLEGIPLAQVTAGGSH 201

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           + A++LSG ++ WG ++   G LG  +E     P  +  PL    V  +SCG  HTA++T
Sbjct: 202 SFALSLSGAVFGWGKNSA--GQLGLNDEQVKETPCHVK-PLRTHKVVYISCGEEHTAILT 258

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            AG LFTFG G  G LGH    +   PR V  L G    + ACG  HT A V        
Sbjct: 259 KAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVP------- 311

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
               SSG L+ +G GD G+LG G +     PT V
Sbjct: 312 ----SSGTLYAFGCGDLGQLGTGHENNVKCPTVV 341



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 150/329 (45%), Gaps = 27/329 (8%)

Query: 254 VFSWGEELGGRLG--HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT--W 309
           +  WG    G+LG  H + + VS P          V+ VACG  HT  +   G +Y+  W
Sbjct: 1   MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGW 60

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            G     G LGH +E +   P      L   H+  ++CG  H+  ++  G L+++G G  
Sbjct: 61  NGE----GQLGHSHEGTHPAPV---ATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGND 113

Query: 370 GVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LGH      S  PR +  L   +  + +CG  H  A+ +             G+LFTW
Sbjct: 114 GQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGD------------DGQLFTW 161

Query: 429 GDGDRGRLGHGDKE-ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           G    G+LG G+   ++  P  V +L      QV+ G S + AL+ +G V+  G    GQ
Sbjct: 162 GQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQ 221

Query: 488 LG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG + +   + P  V+   T   V  I+CG+ H A+LT    ++T+G G +G+LGH    
Sbjct: 222 LGLNDEQVKETPCHVKPLRTHKVVY-ISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLH 280

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +   P  V  L   +V  I CG   T A 
Sbjct: 281 NEINPRRVLELMGSEVSQIACGRKHTLAF 309



 Score = 46.6 bits (109), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V+E+ACG  H   L    +VY+ G    G+LGH  + +   P+ V  L ++ +K I CG 
Sbjct: 36  VKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGH--SHEGTHPAPVATLAEEHIKHIACGQ 93

Query: 570 SFTAAIC----LHKWVSGVD 585
           S + A+     L+ W +G D
Sbjct: 94  SHSLALSLQGNLYSWGAGND 113


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 196/412 (47%), Gaps = 43/412 (10%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           +++ WG  T  G LG GGI        +   S VP   +SA+    + +ACG RH   +T
Sbjct: 6   ELYCWGN-TSHGQLGLGGIEDEQ----ILTPSQVPWTPDSAI----KQVACGHRHTLFLT 56

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G V++ G     +LGH  D     P LI  L +  V  +ACG  H+ A++  G + +W
Sbjct: 57  SSGRVYACGSNDHSQLGH--DLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSW 114

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G ++C  G LG   +  +    K+   L    V  ++CG  H+  +TS G+L+++G   +
Sbjct: 115 GDNDC--GQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172

Query: 370 GVLGHGDRISVSTPREVD---------SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           G LG      V+TP+EV          +L G+     ACG            G+ S    
Sbjct: 173 GQLG------VNTPKEVTHSNQPVRLTTLLGIPVAAIACG------------GNHSFIIS 214

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            S  +F WG  + G+LG  D+ +R  PT +  L       V+CG   +V LT  G V+T 
Sbjct: 215 KSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTC 274

Query: 481 GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGR 539
           G+  YGQLG      ++  R+  +L  + + ++ACG+ H +A++ SR  VY +G G++G+
Sbjct: 275 GAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ 334

Query: 540 LGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCS 590
           LG   T     P +V          +++  +    ++ +H+  SG DQS  +
Sbjct: 335 LGTRSTKSLTLPQVVIGPWVSPSGSALLQSSDAKVSVVIHQIFSGGDQSFVT 386


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 199/405 (49%), Gaps = 29/405 (7%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +++ WG  +   +  GGI        +   S +P   +SAV      +ACG RH   +T 
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQ----ILTPSQIPWKPDSAV----NQVACGHRHTLFLTA 53

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            G+V++ G     +LGH + +    P  I  L++  +  +ACG  H+ A+T  G + +WG
Sbjct: 54  SGKVYACGSNDYSQLGHELPT--KRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWG 111

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            + C  G LGH ++  +    K+   L    V  ++CG  H+  +T  G+L+++G   +G
Sbjct: 112 DNEC--GQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYG 169

Query: 371 VLGHGDRISVST---PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            LG      +S    P  + +L G+     ACG  HT      ++  SS+       +F 
Sbjct: 170 QLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHT-----FLISKSSA-------VFG 217

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG  + G+LG  D+  R  PT +  L       V+CG   +V LT  G V+T G+  YGQ
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 277

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG   ++ ++  R+  +L  + + ++ACG+ H +A++ SR  +Y +G G++G+LG  +T 
Sbjct: 278 LGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTK 337

Query: 547 DRNFPSLVEA-LKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCS 590
             N P +V          +++  +    ++ +H+  SG DQS+ +
Sbjct: 338 SLNLPQVVIGPWVSPSGSALLQSSDEKISVVIHQIFSGGDQSIVT 382


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 170/373 (45%), Gaps = 30/373 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+  +  +  +V+++ CG RH   V   G V++ G    G+LGH  D     P  + AL 
Sbjct: 9   PRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGH--DKSRKKPDQVGALD 66

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN------EMSLWLPKKLNGPL 337
              +  V+CGE HT A+   G +++WG +        HG       E  + +P+ +   L
Sbjct: 67  AQTIVAVSCGEAHTLALNDKGQVFSWGHA-------AHGQIGLSVAEDYIRVPRNIKS-L 118

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV-STPREVDSLKGLRTVR 396
             I +  V+CG  H+  ++    ++++G   +G LG G  I   S PR + SL G+    
Sbjct: 119 YDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAH 178

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
            A G  H+ A+              SG +F WG    G+LG  D+  R  P  + +L   
Sbjct: 179 IAAGGGHSFALT------------MSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQ 226

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
               + CG   T ALT  G V+T G+  YGQLG    N ++  R   +L  + V +IACG
Sbjct: 227 KIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACG 286

Query: 517 DYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             H +A + S   +Y++G G NG+LG G T +R  P  V+         +          
Sbjct: 287 RQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWLTHEDYVQRLPEANGCY 346

Query: 576 CLHKWVSGVDQSM 588
           C+ +  SG DQS 
Sbjct: 347 CVKRIYSGGDQSF 359



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 126/262 (48%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG      I   G+  +  Y  V      P+ ++S   + +  +ACG  H+  ++
Sbjct: 87  GQVFSWGHAAHGQI---GLSVAEDYIRV------PRNIKSLYDIQIVQVACGHHHSLALS 137

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K+ +++SWG+   G+LG G +    S P+ I +L  I    +A G  H+ A+T+SG ++ 
Sbjct: 138 KESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFG 197

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E     P  L   L    +  + CG  HTA +T  G +FTFG G 
Sbjct: 198 WGRN--KFGQLGLNDETDRSAPALLKS-LRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 254

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    + ACG  HT A V            SSG+++++
Sbjct: 255 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVP-----------SSGRIYSF 303

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 304 GLGGNGQLGTGSTSNRKSPFTV 325



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 440 DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT 499
           D+E  L P      +  N   V CG   TV +   G VYT G    GQLG  K+  K P 
Sbjct: 2   DEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKK-PD 60

Query: 500 RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR-NFPSLVEALK 558
           +V G L    +  ++CG+ H   L  + +V++WG  A+G++G    +D    P  +++L 
Sbjct: 61  QV-GALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLY 119

Query: 559 DKQVKSIVCGTSFTAAI 575
           D Q+  + CG   + A+
Sbjct: 120 DIQIVQVACGHHHSLAL 136



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 157 HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYA 215
           H+K L+G  F        +  + G GH    ++ G +F WG     G LG          
Sbjct: 167 HIKSLAGIPF--------AHIAAGGGHSFALTMSGAIFGWGR-NKFGQLG---------L 208

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
             + D   P  ++S     + +I CG  H A +TK+G VF++G    G+LGH   +   +
Sbjct: 209 NDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVN 268

Query: 276 PKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG-GSNCNFG 317
           P+ +  L    V  +ACG  HT A V  SG +Y++G G N   G
Sbjct: 269 PRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 312


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 170/364 (46%), Gaps = 42/364 (11%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC- 292
           ++  I  G  H  ++T  G+VF+ G    G+ G G  + VSH   I  + + + +  A  
Sbjct: 407 EIIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYN 466

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           G  HT  V+  G + T G    N+ G LGHGN  S  +PK +   LE   V  VSC  +H
Sbjct: 467 GCEHTILVSTDGRVATCG---YNYRGQLGHGNTTSESVPKIIRS-LENKIVRLVSCSYYH 522

Query: 352 TAVVTSAGQL---FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           T +    G L   +TFG   +G LGH D I    P+ V++L   + V  ACG +HT  V 
Sbjct: 523 TVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVT 582

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC-QVSCGHSL 467
                        SGK F +G  D G+LG    E +L P  V   +E   C ++ CG+  
Sbjct: 583 ------------VSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYH 630

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANG----------------KLPTRVEGKLTKNFVE 511
           T+AL +  H++  G   YGQLG  ++N                 +L   +EGK     + 
Sbjct: 631 TIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGK----DIV 686

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            IACG YH   ++    +Y +G+  +G+LG GDT +R +P  ++    K++  +  G   
Sbjct: 687 RIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYH 746

Query: 572 TAAI 575
           T  +
Sbjct: 747 TVVL 750



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 158/339 (46%), Gaps = 30/339 (8%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV+S G+   G LGHG  +     + I AL+   +  +  G  HT  +T  G ++T G +
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 433

Query: 313 N---CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           +   C  G     + +S  +PK  +G  +  H  +   G  HT +V++ G++ T G    
Sbjct: 434 DNGQCGQGGTARVSHLS-EIPKMDSGSSQA-HAYN---GCEHTILVSTDGRVATCGYNYR 488

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LGHG+  S S P+ + SL+       +C  +HT    E         + +   L+T+G
Sbjct: 489 GQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACE---------DGNLQNLYTFG 539

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
             D G+LGH D   R +P  V AL +     V+CG   T+ +T +G  +  G   YGQLG
Sbjct: 540 RNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLG 599

Query: 490 -DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD-- 546
            D   N   P +V G L +    EI CG YH   L S   ++ +G+   G+LG G ++  
Sbjct: 600 IDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNAS 659

Query: 547 --------DRNFPS--LVEALKDKQVKSIVCGTSFTAAI 575
                    + F +  L++ L+ K +  I CG   T A+
Sbjct: 660 STSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAV 698



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 140/304 (46%), Gaps = 39/304 (12%)

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           G  H  LV+  G V + G    G+LGHG  +  S PK+I +L+N  V LV+C  +HT   
Sbjct: 467 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 526

Query: 301 TLSG---DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              G   ++YT+G +  ++G LGH + +   +P+ +   L    + SV+CG +HT VVT 
Sbjct: 527 CEDGNLQNLYTFGRN--DYGQLGHNDSIDRKIPQFVEA-LSDQQIVSVACGQYHTMVVTV 583

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVD-SLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
           +G+ F FG   +G LG     +   P +V   L+    +   CG +HT A+         
Sbjct: 584 SGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIAL--------- 634

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT------------CVAALVEPNFCQVSCG 464
              CS   LF +G  D G+LG G   A                  +  L   +  +++CG
Sbjct: 635 ---CSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACG 691

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHV 520
              T+A++  G +Y  G   +GQLG     G    RV      +FV +    +A G YH 
Sbjct: 692 CYHTIAVSDNGVMYVFGRNNHGQLG----TGDTTERVYPFPIDDFVGKRIALVAAGFYHT 747

Query: 521 AVLT 524
            VLT
Sbjct: 748 VVLT 751



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 14/201 (6%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPK 277
           +D  +P+ VE+     + ++ACG  H  +VT  G+ F++G+   G+LG   +++ ++  +
Sbjct: 552 IDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQ 611

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-----------EMS 326
           +   L+      + CG +HT A+     ++ +G ++  +G LG G            +  
Sbjct: 612 VRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRND--YGQLGLGRSNASSTSNLQLQQQ 669

Query: 327 LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
            +   +L   LEG  +  ++CG +HT  V+  G ++ FG    G LG GD      P  +
Sbjct: 670 RFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPI 729

Query: 387 DSLKGLRTVRAACGVWHTAAV 407
           D   G R    A G +HT  +
Sbjct: 730 DDFVGKRIALVAAGFYHTVVL 750



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 9/158 (5%)

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           ++++ G    G LGHGD  +R     + AL +    Q+  G+  TV LT  G V+T G  
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 433

Query: 484 VYGQLGD-----PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
             GQ G           ++P    G    +       G  H  ++++   V T G    G
Sbjct: 434 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYN----GCEHTILVSTDGRVATCGYNYRG 489

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
           +LGHG+T   + P ++ +L++K V+ + C    T   C
Sbjct: 490 QLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLAC 527


>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 390

 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 155/325 (47%), Gaps = 28/325 (8%)

Query: 263 GRLGHGVDSDVSHPKLIDAL--KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 320
           GRLGHG +     P L+ +L  + I  + V CG  H+  ++  G +YT G      G LG
Sbjct: 77  GRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCG--RGYKGFLG 134

Query: 321 HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV 380
           H N+ ++     L   L  + V+ V     H+ VVTS GQ+++FG    G LGHGD    
Sbjct: 135 HKNQNNI-RSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSFGFPKHGRLGHGDDAYR 193

Query: 381 STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD 440
             P  ++ L+G + V+  C   H A + +            +G++F WG G  G+LG GD
Sbjct: 194 RLPTMIEGLRGKKVVQTTCFGAHNAVLTD------------AGQVFMWGSGTDGKLGQGD 241

Query: 441 KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT-MGSPVYGQLGDPKANGKLPT 499
            E+   P  V AL       + CG+    A+   GH++T             + N  +P+
Sbjct: 242 NESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEENRTVPS 301

Query: 500 RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL-- 557
            V   L +  +  IACG  H+A ++    +YTWGK A G+LGHGD  DR+ P++V  L  
Sbjct: 302 LVTA-LAEVPIRAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRHDRHGPTVVATLLL 360

Query: 558 -------KDKQVKSIVCGTSFTAAI 575
                     +V  + CG + TA++
Sbjct: 361 APSEDAPPRGRVAKVSCGANHTASL 385



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 125/257 (48%), Gaps = 26/257 (10%)

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
           V++   L V  +     H+ +VT  G+V+S+G    GRLGHG D+    P +I+ L+   
Sbjct: 147 VDALASLKVTQVCAARNHSLVVTSDGQVYSFGFPKHGRLGHGDDAYRRLPTMIEGLRGKK 206

Query: 287 VELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
           V    C   H   +T +G ++ WG G++   G LG G+  S + P  +   LEG  + S+
Sbjct: 207 VVQTTCFGAHNAVLTDAGQVFMWGSGTD---GKLGQGDNESHFAPVLVRA-LEGKGIKSI 262

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 405
            CG    A +   G LFT+G G  G LGHGD  + + P  V +L  +     ACG  H A
Sbjct: 263 QCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEENRTVPSLVTALAEVPIRAIACGAGHMA 322

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV---------EP 456
           A+ ++ V            L+TWG    G+LGHGD+  R  PT VA L+           
Sbjct: 323 AISDMNV------------LYTWGKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRG 370

Query: 457 NFCQVSCGHSLTVALTT 473
              +VSCG + T +L +
Sbjct: 371 RVAKVSCGANHTASLVS 387



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 14/196 (7%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           +P  +E      V    C G H A++T  G+VF WG    G+LG G +     P L+ AL
Sbjct: 195 LPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGKLGQGDNESHFAPVLVRAL 254

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +   ++ + CG     A+ + G ++TW   +   G LGHG+E +  +P  +    E + +
Sbjct: 255 EGKGIKSIQCGYDFAAAINVEGHLFTW--GHGLGGRLGHGDEENRTVPSLVTALAE-VPI 311

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL----------KGL 392
            +++CG  H A ++    L+T+G    G LGHGDR     P  V +L          +G 
Sbjct: 312 RAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRG- 370

Query: 393 RTVRAACGVWHTAAVV 408
           R  + +CG  HTA++V
Sbjct: 371 RVAKVSCGANHTASLV 386



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 90/178 (50%), Gaps = 22/178 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF+WG  T DG LG G + S          F P  V +     +++I CG   AA + 
Sbjct: 224 GQVFMWGSGT-DGKLGQGDNES---------HFAPVLVRALEGKGIKSIQCGYDFAAAIN 273

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +G +F+WG  LGGRLGHG + + + P L+ AL  + +  +ACG  H  A++    +YTW
Sbjct: 274 VEGHLFTWGHGLGGRLGHGDEENRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTW 333

Query: 310 GGSNCNFGLLGHGNE---------MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            G N   G LGHG+           +L L    + P  G  V+ VSCG  HTA + SA
Sbjct: 334 -GKNAE-GQLGHGDRHDRHGPTVVATLLLAPSEDAPPRG-RVAKVSCGANHTASLVSA 388


>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
 gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
          Length = 710

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 152/295 (51%), Gaps = 26/295 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           +ACG  H ALVT+ G ++++G    G+LG G     S P  + +LK+   +LVACG  HT
Sbjct: 40  VACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL-PKKLNGPLEGIHVSSVSCGPWHTAVVT 356
              T  G +Y WGG   + G LG G + +    P  L+   + I   SVSCG +HTAVVT
Sbjct: 100 LIATGDGKVYVWGGG--SEGQLGLGEDTTECTEPTLLDFDSKAI---SVSCGYYHTAVVT 154

Query: 357 SAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
             G L+TFG+  +G LG  + D  S  TP++V  +K  +     CG  HT A+ E     
Sbjct: 155 EDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIK-EKVKFVVCGGGHTTAIAE----- 208

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEAR-LVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                  SG ++T+G+G  G+LGHG+       P  V    + +    SCG + T  +T 
Sbjct: 209 -------SGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENFTAVITG 261

Query: 474 TGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            GH+YT G   +G+LG   +   N   P +V  +  K  V+ +ACG  H+ V+ S
Sbjct: 262 KGHLYTFGDGRHGKLGLGDESFTNQFRPFKV-ARFNKFQVQWVACGGCHMMVIAS 315



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 134/291 (46%), Gaps = 35/291 (12%)

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           + +V+CG  HTA+VT  G+L+TFG   +G LG G   + S P  V SLK  +    ACG 
Sbjct: 37  ICAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGR 96

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQ 460
            HT                  GK++ WG G  G+LG G+       PT +    +     
Sbjct: 97  SHTLIAT------------GDGKVYVWGGGSEGQLGLGEDTTECTEPTLLD--FDSKAIS 142

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN---GKLPTRVEGKLTKNFVEEIACGD 517
           VSCG+  T  +T  G++YT G   YG+LG   ++      P +V G   K  V+ + CG 
Sbjct: 143 VSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTG--IKEKVKFVVCGG 200

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDT-DDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
            H   +     VYT+G GA+G+LGHG++  +   P  VE  +D   K   CG +FTA I 
Sbjct: 201 GHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENFTAVIT 260

Query: 577 ----LHKWVSGV-------DQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTC 616
               L+ +  G        D+S  +  R    FK  R N +    V C  C
Sbjct: 261 GKGHLYTFGDGRHGKLGLGDESFTNQFRP---FKVARFNKFQVQWVACGGC 308



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 146/294 (49%), Gaps = 26/294 (8%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           ++N  +  VACG+ HT  VT +G +YT+G +  ++G LG G+  +   P  +   L+   
Sbjct: 32  IRNDRICAVACGDEHTALVTENGRLYTFGSN--DWGQLGLGHTKTASKPSCVKS-LKHEK 88

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACG 400
              V+CG  HT + T  G+++ +G G+ G LG G D    + P  +D     + +  +CG
Sbjct: 89  AKLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDF--DSKAISVSCG 146

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG--HGDKEARLVPTCVAALVEPNF 458
            +HTA V E             G L+T+G+ + G+LG  + D ++   P  V  + E   
Sbjct: 147 YYHTAVVTE------------DGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKE-KV 193

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT--RVEGKLTKNFVEEIACG 516
             V CG   T A+  +G VYT G+   GQLG   +  + PT  RVE +      +  +CG
Sbjct: 194 KFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVE-RFRDADCKHASCG 252

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +   AV+T +  +YT+G G +G+LG GD    N   P  V      QV+ + CG
Sbjct: 253 ENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACG 306



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 124/255 (48%), Gaps = 26/255 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDAL 282
           P  V+S      + +ACG  H  + T  G+V+ WG    G+LG G D ++ + P L+D  
Sbjct: 78  PSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDF- 136

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE--MSLWLPKKLNGPLEGI 340
            +     V+CG +HT  VT  G++YT+G     +G LG  N    S   P+K+ G  E +
Sbjct: 137 -DSKAISVSCGYYHTAVVTEDGNLYTFG--ETEYGKLGLNNSDLDSSDTPQKVTGIKEKV 193

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVDSLKGLRTVRAAC 399
               V CG  HT  +  +G ++TFG+G  G LGHG+ +  S TP  V+  +      A+C
Sbjct: 194 KF--VVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASC 251

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE--ARLVPTCVAALVEPN 457
           G   TA +               G L+T+GDG  G+LG GD+    +  P  VA   +  
Sbjct: 252 GENFTAVIT------------GKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQ 299

Query: 458 FCQVSCG--HSLTVA 470
              V+CG  H + +A
Sbjct: 300 VQWVACGGCHMMVIA 314



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 11/145 (7%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG---VDSDVSHPK 277
           S  P+ V + +   V+ + CGG H   + + G V+++G    G+LGHG   ++S   H  
Sbjct: 180 SDTPQKV-TGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPH-- 236

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE--MSLWLPKKLNG 335
            ++  ++ + +  +CGE+ T  +T  G +YT+G  +   G LG G+E   + + P K+  
Sbjct: 237 RVERFRDADCKHASCGENFTAVITGKGHLYTFG--DGRHGKLGLGDESFTNQFRPFKV-A 293

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQ 360
                 V  V+CG  H  V+ S  Q
Sbjct: 294 RFNKFQVQWVACGGCHMMVIASPRQ 318



 Score = 40.4 bits (93), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 2/84 (2%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--P 276
           ++S  P  VE     D ++ +CG    A++T +G ++++G+   G+LG G +S  +   P
Sbjct: 230 LESPTPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQFRP 289

Query: 277 KLIDALKNINVELVACGEHHTCAV 300
             +       V+ VACG  H   +
Sbjct: 290 FKVARFNKFQVQWVACGGCHMMVI 313


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 163/331 (49%), Gaps = 19/331 (5%)

Query: 205 GGGIHRSGSYAGVKMDS-FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           G  IH      G++ +  F PKA++      V   A G  H   +TK G+V+S G    G
Sbjct: 5   GSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDYG 64

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN 323
           +LGH  D     P+L+  L   ++  VACGE H+ A++  G++++WG  N  +G LGH  
Sbjct: 65  QLGH--DQPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDN--YGQLGHQL 120

Query: 324 EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV-ST 382
             +L +  KL   L    V  ++ G  H+  +T+AG++F +G   FG LG G      ST
Sbjct: 121 GGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYEST 180

Query: 383 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE 442
           P  V SL G+     ACG  HT AV              SG +F WG    G+LG  D  
Sbjct: 181 PTTVCSLSGIPFALIACGANHTFAV------------SKSGAVFGWGKNINGQLGLNDTV 228

Query: 443 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVE 502
           ++  PT +  L       +SCG   +  LT  G V++ G+ +YGQLG    + ++  R  
Sbjct: 229 SKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQV 288

Query: 503 GKLTKNFVEEIACGDYH-VAVLTSRTEVYTW 532
            +L  + + +I+CG  H +A + SR  VY++
Sbjct: 289 LELMGSTITQISCGRQHSLAFVPSRGRVYSY 319



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 161/328 (49%), Gaps = 25/328 (7%)

Query: 254 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +F WG  + G LG G   +  V  PK +D  +  +V   A G +HT  +T  G +Y+ G 
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           ++  +G LGH        P+ ++G L+   + +V+CG  H+  ++  G++F++G   +G 
Sbjct: 61  ND--YGQLGHDQPRKR--PQLVSG-LDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQ 115

Query: 372 LGH--GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           LGH  G  + +  P+ + SL   + V+ A G  H+ A+             ++G++F WG
Sbjct: 116 LGHQLGGTLQI-VPKLIKSLAKYQVVQIAAGQRHSVALT------------NAGEIFVWG 162

Query: 430 DGDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
             D G+LG G        PT V +L    F  ++CG + T A++ +G V+  G  + GQL
Sbjct: 163 ANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQL 222

Query: 489 G-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G +   + K PT++   L  + V  I+CGD     LT    V++ G G  G+LGHG T +
Sbjct: 223 GLNDTVSKKFPTQLR-TLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSN 281

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              P  V  L    +  I CG   + A 
Sbjct: 282 EILPRQVLELMGSTITQISCGRQHSLAF 309



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 127/275 (46%), Gaps = 19/275 (6%)

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           M+ WG +      LG   E  ++ PK L+   E   V   + G  HT  +T  G++++ G
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDW-FEAKSVMKAALGANHTLFLTKDGKVYSCG 59

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
              +G LGH        P+ V  L     +  ACG  H+ A+               G++
Sbjct: 60  SNDYGQLGHDQ--PRKRPQLVSGLDAYSIINVACGEMHSLAL------------SRWGEV 105

Query: 426 FTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           F+WG  + G+LGH      ++VP  + +L +    Q++ G   +VALT  G ++  G+  
Sbjct: 106 FSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGAND 165

Query: 485 YGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
           +GQLG          PT V   L+      IACG  H   ++    V+ WGK  NG+LG 
Sbjct: 166 FGQLGLGTITPYESTPTTV-CSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGL 224

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            DT  + FP+ +  L++ +V+ I CG  F+  + L
Sbjct: 225 NDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTL 259


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 164/365 (44%), Gaps = 49/365 (13%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALK------------------NINVELVACGE 294
           EV++WG    G++GHG +     P LI  LK                   +    V CG 
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+       D++ WG G     G+    N+   ++  ++        V   S G  H  
Sbjct: 96  FHSVLFA-EQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIK------RVQMASAGGLHNI 148

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            +T  G ++T+G G FG LGHG       PR ++     R V  + G  HTAAV E    
Sbjct: 149 ALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTE---- 204

Query: 414 SSSSSNCSSGKLFTWG-DGDRGRLGHG-----DKEARLVPTCVAALVEPNFCQVSCGHSL 467
                   SG+L+TWG D   GRLGHG     D+ A   PT V AL  P    V CG   
Sbjct: 205 --------SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVP-IALVYCGGFF 255

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           T+ALT +G +++ G     +LG          +V   L    + ++ACG +H A LT   
Sbjct: 256 TMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDG 315

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
           +V TWG G NG+LGHG  ++   P++VEA+ DK    I CG ++TAAI     L+ W   
Sbjct: 316 KVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKN 375

Query: 584 VDQSM 588
            D  +
Sbjct: 376 RDYQL 380



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 180/365 (49%), Gaps = 34/365 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           + CG  H+ L  +Q +VF WG+  GGRLG  +D++ +  K     +   V++ + G  H 
Sbjct: 91  VTCGLFHSVLFAEQ-DVFVWGKGDGGRLG--IDTEFNQYKPYVNPRIKRVQMASAGGLHN 147

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+T  G++YTWG     FG LGHG+     LP+ L GP +   +  VS G  HTA VT 
Sbjct: 148 IALTEVGNVYTWG--YGAFGALGHGSYERELLPRLLEGPWKD-RIVHVSAGGSHTAAVTE 204

Query: 358 AGQLFTFG-DGTFGVLGHG-----DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +G+L+T+G D   G LGHG     D  ++S P +V +L  +      CG + T A+ +  
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIALVYCGGFFTMALTK-- 261

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                     SG+L++WG      LGHG +     P  VAAL +    QV+CG     AL
Sbjct: 262 ----------SGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAAL 311

Query: 472 TTTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
           T  G V T G    GQLG     NGK P  VE    K     IACG    A +T   ++Y
Sbjct: 312 TQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKT-CTYIACGPAWTAAITENGDLY 370

Query: 531 TWGKGANGRLG-HGDTDDRNFPSLV---EALKDK---QVKSIVCGTSFTAAICLHKWVSG 583
           TWGK  + +LG  G  D++  P LV   +AL +K   +V  + CG +    I      + 
Sbjct: 371 TWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSRPKPAQ 430

Query: 584 VDQSM 588
           V QS+
Sbjct: 431 VTQSL 435



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 166/348 (47%), Gaps = 39/348 (11%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           DVF+WG+  GDG             G+  +    K   +  +  VQ  + GG H   +T+
Sbjct: 105 DVFVWGK--GDG----------GRLGIDTEFNQYKPYVNPRIKRVQMASAGGLHNIALTE 152

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            G V++WG    G LGHG       P+L++      +  V+ G  HT AVT SG++YTW 
Sbjct: 153 VGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESGELYTW- 211

Query: 311 GSNCNFGLLGHGN-----EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           G +   G LGHGN     E +L  P K+   L+ + ++ V CG + T  +T +GQL+++G
Sbjct: 212 GRDEGEGRLGHGNPDIMDEGALSRPTKVQA-LD-VPIALVYCGGFFTMALTKSGQLWSWG 269

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
                 LGHG R +   P+ V +L+ +  V+ ACG +H AA+ +             GK+
Sbjct: 270 GNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQ------------DGKV 317

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            TWG G  G+LGHG  E    P  V A+ +     ++CG + T A+T  G +YT G    
Sbjct: 318 ITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRD 377

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEE-------IACGDYHVAVLTSR 526
            QLG P    +    V  +  +   E+       ++CG  H   + SR
Sbjct: 378 YQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 23/230 (10%)

Query: 190 GDVFIWGECTGDGILGGG---IHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           G+++ WG   G+G LG G   I   G+ +        P  V+ A+ + +  + CGG    
Sbjct: 206 GELYTWGRDEGEGRLGHGNPDIMDEGALS-------RPTKVQ-ALDVPIALVYCGGFFTM 257

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
            +TK G+++SWG      LGHG  ++   PK++ AL+++ +  VACG  H  A+T  G +
Sbjct: 258 ALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKV 317

Query: 307 YTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            TWG G N   G LGHG   +   P  +   +     + ++CGP  TA +T  G L+T+G
Sbjct: 318 ITWGYGGN---GQLGHGTLENGKEPAIVEA-MADKTCTYIACGPAWTAAITENGDLYTWG 373

Query: 366 ---DGTFGVLGHGDR----ISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
              D   G+ G  D     + V  P+ +     +  +  +CG  H   +V
Sbjct: 374 KNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIV 423



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 25/187 (13%)

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF----------------- 458
           SS   +  +++ WG G  G++GHG ++   +P  ++ L    F                 
Sbjct: 28  SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87

Query: 459 -CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD 517
              V+CG   +V L     V+  G    G+LG      +    V  ++ +  V+  + G 
Sbjct: 88  NVGVTCGLFHSV-LFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASAGG 144

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC- 576
            H   LT    VYTWG GA G LGHG  +    P L+E     ++  +  G S TAA+  
Sbjct: 145 LHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTE 204

Query: 577 ---LHKW 580
              L+ W
Sbjct: 205 SGELYTW 211


>gi|303271437|ref|XP_003055080.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463054|gb|EEH60332.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1071

 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 146/461 (31%), Positives = 201/461 (43%), Gaps = 100/461 (21%)

Query: 191 DVFIWGEC----TGDGILGGGIHRSGSYAGVKMDSFV----PKAVESAVVLDVQNIACGG 242
           DVF+WG      T    L    H       V +D FV    P         D ++IA G 
Sbjct: 220 DVFVWGRVPSVMTTPETLASSPHH------VVVDRFVMTPSPVPALGGAACDPRSIALGT 273

Query: 243 RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI-NVE-----------LV 290
           RHA   T+ G V++WG+ +GGRLGHG   D + P  + A  ++ +V+           +V
Sbjct: 274 RHAVAATRAGGVYTWGDGVGGRLGHGDVVDRATPTRVRAADDVFDVKAGGGGDGGARAVV 333

Query: 291 ACGEHHTCAVTLSGD----------MYTWGGSNCNFGLLGHGNEMS------------LW 328
            CG   T  +T   D          +Y WGGS  +FG+ G G   S            +W
Sbjct: 334 RCGGDRTVVLTRDRDDDGVEDGGGALYAWGGSGDDFGVGGGGGGSSAEDAATRWTLSRIW 393

Query: 329 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR----------- 377
                +   E   ++ VS G +H A V+  G LFT+G+G F  LGHG             
Sbjct: 394 FSSSSSSSPEA-RITRVSVGMFHVAAVSVDGALFTWGEGAFHALGHGGGGGGGGGGGASR 452

Query: 378 --ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
              S   PR V+ L+G      +CGVWHTAAVV+             G+L+TWGDGD G+
Sbjct: 453 PPTSEPRPRRVEGLRGRVVADVSCGVWHTAAVVD------------DGQLYTWGDGDGGK 500

Query: 436 LGHGDKEARL-VPT------------CVAALVEPNFCQV------SCGHSLTVALTTTGH 476
           LGH D    + VPT                  E N  ++      SCG S T+AL   G 
Sbjct: 501 LGHADVTDDVPVPTPRRVADWTPGGGGGGGGEEKNASEIVVIVAASCGQSHTLALDANGV 560

Query: 477 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            + +GS   G+ G P      P R+      + V  ++ GD H A LT R  +Y WG G 
Sbjct: 561 AWCLGS--VGKTGAPPP--PTPRRIAS--IPDAVASLSSGDSHAAALTRRGRLYVWGVGK 614

Query: 537 NGRLGHGDTDDRNFPSLVE-ALKDKQVKSIVCGTSFTAAIC 576
            G LGHG   +   P L+E AL+ + ++ + CG   TA + 
Sbjct: 615 RGALGHGGFGEELAPRLLEGALEGRTIREVTCGPESTAVVV 655



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)

Query: 948  EWVEQDETGVYITL-VALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSM 1005
            EW+E+ E GV++T+ V    G + L+RVRFS+  F +  A  WW ANRAR+ ++  +++
Sbjct: 1008 EWIEEHEPGVFLTVGVDATTGEETLRRVRFSKTTFKDGAARGWWEANRARIVRERGLAL 1066



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P+ I ++ +    L + G+ H  A+T  G +Y WG      G LGHG       P+ L G
Sbjct: 578 PRRIASIPDAVASL-SSGDSHAAALTRRGRLYVWGVGK--RGALGHGGFGEELAPRLLEG 634

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQL 361
            LEG  +  V+CGP  TAVV  A  L
Sbjct: 635 ALEGRTIREVTCGPESTAVVVDAAAL 660


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 165/346 (47%), Gaps = 34/346 (9%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           V+ WG+             +GS  G ++ S  P+ ++ A+   V+++ACG  H+A+V   
Sbjct: 1   VYFWGQ-------------AGSAVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGS 47

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG- 310
           GEV  WGE   G+ G G      HP  + +L  +    V+CG  HT  V+  G +++WG 
Sbjct: 48  GEVLCWGENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGL 107

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           G+N   G LGHG+  +L  P  +   + G  V +V+CG  HT +V + G+L+T G    G
Sbjct: 108 GAN---GQLGHGSRDNLTTPSVVQ-AMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNG 163

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
             G G    + +P+ V+SL+G     A+CG  HTA V               G++FT+G 
Sbjct: 164 QCGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVT------------GGGEVFTFGS 211

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
           G  G+LGHGD +   +P  V ALV      V+CG   TV       V+  G    GQLG 
Sbjct: 212 GSCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGA 271

Query: 491 PKANGKL---PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
              +      P ++E  L +  VE   C    V  LT R  +  WG
Sbjct: 272 SSTSHPYLSEPRQME-FLKEEEVELCKCNQSEVIALTRRGALRAWG 316



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 152/325 (46%), Gaps = 22/325 (6%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V+ WG+  G  +G  V S  S P+++       V  VACG  H+  V  SG++  WG + 
Sbjct: 1   VYFWGQA-GSAVGEQVSS--STPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENK 57

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
             +G  G G +     P  + G L G+   SVSCG  HT VV+  G++F++G G  G LG
Sbjct: 58  --YGQCGTGTQEQTEHPTFV-GSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLG 114

Query: 374 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
           HG R +++TP  V +++G   +   CGV HT  V+            + G+L+T G    
Sbjct: 115 HGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVL------------AGGELYTCGWNKN 162

Query: 434 GRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA 493
           G+ G G     L P CV +L        SCG   T  +T  G V+T GS   GQLG    
Sbjct: 163 GQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDC 222

Query: 494 NG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-- 550
               +P RV G L    +  +ACG+ +         V+ +G    G+LG   T       
Sbjct: 223 QDLSMPRRV-GALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPYLSE 281

Query: 551 PSLVEALKDKQVKSIVCGTSFTAAI 575
           P  +E LK+++V+   C  S   A+
Sbjct: 282 PRQMEFLKEEEVELCKCNQSEVIAL 306


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 186/376 (49%), Gaps = 38/376 (10%)

Query: 217 VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSH 275
           +  D   P+ +    +  + ++ACGG H   +T  G+  SWG    G+LGHG V S+  +
Sbjct: 35  ILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLY 94

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK + +L    +  V+ G  H+  V+ +G ++T G  + +FG LGHG+  S   P K++ 
Sbjct: 95  PKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCG--DGSFGQLGHGDNASHCSPVKVSC 152

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRI-SVSTPREVDSLKGLR 393
            ++ +HV+ V+CG  H+ V+    Q++ FG G  G LG   DR+ SV+ P+ V   +G+ 
Sbjct: 153 FVD-LHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVE 211

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
            V  A    H+AAV               G ++TWG G +G       E   VP C+ + 
Sbjct: 212 IVGTAANGDHSAAV------------SVDGHVYTWGRGFKGF------EDAHVPQCLNSS 253

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG---KLPTRVEGKLTK--- 507
           +  NF +V+ G +  +A++  G VY +G    G L D +  G     P   E  L K   
Sbjct: 254 L--NFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPG 311

Query: 508 ---NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP---SLVEALKDKQ 561
                + +IA G  H  ++T   E+ TWG G +G+LG GDT D+  P   SL   L +  
Sbjct: 312 LDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDYDLNEAA 371

Query: 562 VKSIVCGTSFTAAICL 577
              + CG+ FT A+ +
Sbjct: 372 SIRVFCGSGFTFAVTM 387


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/346 (33%), Positives = 170/346 (49%), Gaps = 22/346 (6%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           D Q I  G      V+  G V + G+   GRLG G  ++ S PK +       +  V+  
Sbjct: 402 DAQMIEAGQYCTFSVSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSS 461

Query: 294 ---EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
              + HT AVT  G++++WG  + ++G LGHGN  +   PK + GPL G  V  VS G  
Sbjct: 462 KGSDGHTLAVTAEGEVFSWG--DGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYR 519

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           H+A VT+ G+L+T+G+G FG LGH D  S + P  V  + G+  V  ACG  HT AV + 
Sbjct: 520 HSAAVTNDGELYTWGEGDFGRLGHSDSHSRNVPTLVKDISGVGQV--ACGSSHTIAVAQ- 576

Query: 411 MVGSSSSSNCSSGKL-FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
                       G++ +++G GD G+LGHGD      P  + AL      +V  G   ++
Sbjct: 577 -----------DGRIVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSL 625

Query: 470 ALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           ALT+ G V+  G       G  +     P  +E +L+   + +I+CGD H   L+   EV
Sbjct: 626 ALTSAGQVFAWGCGSCLGCGSSETTSLRPRLIE-ELSITKIIDISCGDSHCLALSHENEV 684

Query: 530 YTWGKGANGRLGHGDTDDR-NFPSLVEALKDKQVKSIVCGTSFTAA 574
           + WG  A G+ G G T      P  V  L+   ++ I  GTS + A
Sbjct: 685 FAWGNNAMGQCGQGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLA 730



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 125/280 (44%), Gaps = 49/280 (17%)

Query: 345  VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW-- 402
            V CG   T +V + G +   G+G++G LG G+   + TP  + +L+G    +        
Sbjct: 3895 VVCGQNCTFLVQANGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSD 3954

Query: 403  -HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
             H+ A+ E            +G++F+WGDGD G+LGHG+ E +  P  +  L      Q+
Sbjct: 3955 GHSLALTE------------TGEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQL 4002

Query: 462  SCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG---------------KL 505
            +CG   +  +T  G ++T GS   G+LG    +N  +P RV                  +
Sbjct: 4003 ACGFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAM 4062

Query: 506  TKN-------------FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
             KN             F+E+IA G  H+  L++  +VY WG     +LG G ++    P 
Sbjct: 4063 LKNHNRPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPI 4122

Query: 553  LVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 592
            LV  L+ K ++ I  G   ++A     W +    +  SGC
Sbjct: 4123 LVTTLQGKNIRQISAGRCHSSA-----WTTPALSTRASGC 4157



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 143/324 (44%), Gaps = 38/324 (11%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
            +V++WG             R G  A     + VP    S  +   Q + CG     LV  
Sbjct: 3861 EVYLWGN-----------GRHGQLADAGTSASVPTLAPS--LSQTQQVVCGQNCTFLVQA 3907

Query: 251  QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELVAC--GEHHTCAVTLSGDMY 307
             G V + GE   GRLG G   D+  P +I AL+   V +LV     + H+ A+T +G+++
Sbjct: 3908 NGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVF 3967

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +WG  + ++G LGHGN      PK++ G L+G  V  ++CG  H+AVVT+ G+LFTFG G
Sbjct: 3968 SWG--DGDYGKLGHGNSERQRRPKQIEG-LQGEEVVQLACGFKHSAVVTADGKLFTFGSG 4024

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV----------------WHTAAVVEVM 411
              G LG     +   P  V +L G    +   G+                     + ++ 
Sbjct: 4025 DSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIA 4084

Query: 412  VGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
            VG       S +G ++ WG     +LG G       P  V  L   N  Q+S G   + A
Sbjct: 4085 VGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQGKNIRQISAGRCHSSA 4144

Query: 471  LTTTGHVYTMGSPVYG-QLGDPKA 493
             TT   + T  S   G QLG P++
Sbjct: 4145 WTTPA-LSTRASGCSGIQLGLPQS 4167



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 144/293 (49%), Gaps = 26/293 (8%)

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y WG ++ +   L  G    +  PK   G  +      +  G + T  V++ G +   G
Sbjct: 372 VYVWGSNSSH--QLAEGTLEKILQPKLAQGFSDA---QMIEAGQYCTFSVSADGAVKACG 426

Query: 366 DGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVGSSSSSNCSS 422
            G++G LG GD  + S P+++  +  + +R V ++ G   HT AV             + 
Sbjct: 427 KGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVT------------AE 474

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAA-LVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           G++F+WGDGD G+LGHG+   +  P  +   L+      VS G+  + A+T  G +YT G
Sbjct: 475 GEVFSWGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWG 534

Query: 482 SPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGR 539
              +G+LG   ++ + +PT V+     + V ++ACG  H +AV      V+++G G NG+
Sbjct: 535 EGDFGRLGHSDSHSRNVPTLVKDI---SGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGK 591

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 592
           LGHGDT+    P ++EAL    ++ +  G+  + A+     V       C GC
Sbjct: 592 LGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGC 644



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 6/155 (3%)

Query: 424  KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            +++ WG+G  G+L      A  VPT   +L +    QV CG + T  +   G V  +G  
Sbjct: 3861 EVYLWGNGRHGQLADAGTSAS-VPTLAPSLSQTQ--QVVCGQNCTFLVQANGTVLAVGEG 3917

Query: 484  VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG---DYHVAVLTSRTEVYTWGKGANGRL 540
             YG+LG   ++      +   L    V ++      D H   LT   EV++WG G  G+L
Sbjct: 3918 SYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYGKL 3977

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            GHG+++ +  P  +E L+ ++V  + CG   +A +
Sbjct: 3978 GHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVV 4012


>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Anolis carolinensis]
          Length = 788

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 178/342 (52%), Gaps = 33/342 (9%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +I+CG  H ++VT+ G+++ +G    G+LG G  + V+ P  + ALK   V+L ACG +H
Sbjct: 39  HISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNH 98

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G++Y  GG+  + G LG G+         ++   +   +  ++ G + +AV+T
Sbjct: 99  TLICTEQGNVYAAGGN--SEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLT 156

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             GQL  +GD + G +G GD+  VS P +VD  K +  +  +CG +H+A + +       
Sbjct: 157 EDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDIGKPVSCI--SCGYYHSALITQ------- 207

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEAR--LVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                 G+L+T+G+ + G+LG   K+ +   +P  V+  +     +V+CG   TV L   
Sbjct: 208 -----DGELYTFGEPENGKLGLSPKQLKNHKLPQLVSG-ISGKVSKVACGGGHTVVL-AE 260

Query: 475 GHVYTMGSPVYGQLGDPKANGKL------PTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           G VYT G   YGQLG    +G        P  V+  L K+ +  IACG+ H A++T    
Sbjct: 261 GDVYTFGLGQYGQLG----HGTFVFETSEPKTVD-HLGKHKICHIACGENHTALITENGL 315

Query: 529 VYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +YT+G G +G+LG G+ +  N   P+L        V S+ CG
Sbjct: 316 MYTFGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACG 357



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 18/190 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G + +WG+   +G +G G     +Y  V     + K V          I+CG  H+AL+T
Sbjct: 159 GQLVMWGD-NSEGQIGLG---DKAYVSVPHQVDIGKPVSC--------ISCGYYHSALIT 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           + GE++++GE   G+LG       +H  P+L+  +    V  VACG  HT  V   GD+Y
Sbjct: 207 QDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISG-KVSKVACGGGHT-VVLAEGDVY 264

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           T+G     +G LGHG  +      K    L    +  ++CG  HTA++T  G ++TFGDG
Sbjct: 265 TFGLG--QYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDG 322

Query: 368 TFGVLGHGDR 377
             G LG G+ 
Sbjct: 323 RHGKLGLGEE 332



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 4/118 (3%)

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDY 518
            +SCG   T  +T  G +Y  GS  +GQLG    N    PT V+  L    V+  ACG  
Sbjct: 39  HISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKA-LKPEKVKLAACGRN 97

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL-KDKQVKSIVCGTSFTAAI 575
           H  + T +  VY  G  + G+LG GDT++R+   L+    K  ++K +  G S+T+A+
Sbjct: 98  HTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAG-SYTSAV 154



 Score = 47.0 bits (110), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 21/131 (16%)

Query: 170 LSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV-----P 224
           +S  VS  + G GH    + GDV+ +G               G Y  +   +FV     P
Sbjct: 241 ISGKVSKVACGGGHTVVLAEGDVYTFG--------------LGQYGQLGHGTFVFETSEP 286

Query: 225 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDAL 282
           K V+      + +IACG  H AL+T+ G ++++G+   G+LG G ++  +   P L    
Sbjct: 287 KTVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLGLGEENYTNQFVPTLCSNF 346

Query: 283 KNINVELVACG 293
               V  VACG
Sbjct: 347 LRFIVHSVACG 357


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 176/319 (55%), Gaps = 26/319 (8%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +I+CG  H+A++T+ G ++++G    G+LG G     + P  + +LK   V LVACG  H
Sbjct: 40  HISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSH 99

Query: 297 TCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           T   T +G +Y++G GS+   G LG G+      P+ +N P +   +  +S G  H+A +
Sbjct: 100 TIVCTKAGRLYSFGAGSD---GQLGTGDAQCATSPQLINLPEQKYKL--LSAGTDHSAAL 154

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           T+ G L+ +G G+ G LG G+  SV TP+E+     +  V  +CG +HTA V +      
Sbjct: 155 TTDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSWV--SCGYYHTAIVTD------ 206

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                  GKL+T+G+ + G+LG  +   E    P  V ++ E     V+CG + T  ++ 
Sbjct: 207 ------DGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITE-KIKLVACGGAHTAVISD 259

Query: 474 TGHVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
            G++YT G  ++GQLG+  +     LP +V  +L+++  + ++CGD H AV+T +  +YT
Sbjct: 260 VGNLYTFGDGMHGQLGNGPSLLQLSLPQKV-ARLSEHKCKYVSCGDNHTAVITEKGAMYT 318

Query: 532 WGKGANGRLGHGDTDDRNF 550
           +G G +G+LG  + D  N 
Sbjct: 319 FGDGRHGKLGISEEDFCNI 337



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/272 (37%), Positives = 146/272 (53%), Gaps = 28/272 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V+S     V  +ACG  H  + TK G ++S+G    G+LG G     + P+LI+ L 
Sbjct: 79  PGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLIN-LP 137

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH- 341
               +L++ G  H+ A+T  G +Y WG GS    G LG GN  S+  PK+L       H 
Sbjct: 138 EQKYKLLSAGTDHSAALTTDGTLYMWGSGSE---GQLGLGNTDSVETPKELK-----FHS 189

Query: 342 -VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRI-SVSTPREVDSLKGLRTVRAA 398
            VS VSCG +HTA+VT  G+L+TFG+  FG LG   D++   +TP+ V+S+   +    A
Sbjct: 190 SVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESIT-EKIKLVA 248

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPN 457
           CG  HTA + +V            G L+T+GDG  G+LG+G    +L +P  VA L E  
Sbjct: 249 CGGAHTAVISDV------------GNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHK 296

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
              VSCG + T  +T  G +YT G   +G+LG
Sbjct: 297 CKYVSCGDNHTAVITEKGAMYTFGDGRHGKLG 328



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 152/298 (51%), Gaps = 24/298 (8%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           ++N     ++CG+ H+  +T SG +YT+G +  ++G LG G+      P  +   L+   
Sbjct: 33  IRNDKAMHISCGDEHSAIITESGRLYTFGSN--DWGQLGLGHMKPTTKPGCVK-SLKQEG 89

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V+ V+CG  HT V T AG+L++FG G+ G LG GD    ++P+ ++ L   +    + G 
Sbjct: 90  VNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLIN-LPEQKYKLLSAGT 148

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            H+AA+             + G L+ WG G  G+LG G+ ++   P  +      +   V
Sbjct: 149 DHSAALT------------TDGTLYMWGSGSEGQLGLGNTDSVETPKELK--FHSSVSWV 194

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDY 518
           SCG+  T  +T  G +YT G   +G+LG   D   +   P  VE    K  ++ +ACG  
Sbjct: 195 SCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEK--IKLVACGGA 252

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDT-DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H AV++    +YT+G G +G+LG+G +    + P  V  L + + K + CG + TA I
Sbjct: 253 HTAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVI 310



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 25/223 (11%)

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           A +   G +FTFG           R + + P +   ++  + +  +CG  H+A + E   
Sbjct: 7   ADIPETGAIFTFGK---------SRFADNLPSKF-WIRNDKAMHISCGDEHSAIITE--- 53

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                    SG+L+T+G  D G+LG G  +    P CV +L +     V+CG S T+  T
Sbjct: 54  ---------SGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCT 104

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G +Y+ G+   GQLG   A      ++   L +   + ++ G  H A LT+   +Y W
Sbjct: 105 KAGRLYSFGAGSDGQLGTGDAQCATSPQLI-NLPEQKYKLLSAGTDHSAALTTDGTLYMW 163

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G G+ G+LG G+TD    P   E      V  + CG   TA +
Sbjct: 164 GSGSEGQLGLGNTDSVETPK--ELKFHSSVSWVSCGYYHTAIV 204



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 11/131 (8%)

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEG---KLTKNFVEEIACG 516
            +SCG   +  +T +G +YT GS  +GQLG        PT   G    L +  V  +ACG
Sbjct: 40  HISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMK---PTTKPGCVKSLKQEGVNLVACG 96

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI- 575
             H  V T    +Y++G G++G+LG GD      P L+  L +++ K +  GT  +AA+ 
Sbjct: 97  RSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLIN-LPEQKYKLLSAGTDHSAALT 155

Query: 576 ---CLHKWVSG 583
               L+ W SG
Sbjct: 156 TDGTLYMWGSG 166



 Score = 46.2 bits (108), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 16/123 (13%)

Query: 474 TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           TG ++T G   +           LP++    +  +    I+CGD H A++T    +YT+G
Sbjct: 12  TGAIFTFGKSRFAD--------NLPSKFW--IRNDKAMHISCGDEHSAIITESGRLYTFG 61

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC-----LHKWVSGVDQSM 588
               G+LG G       P  V++LK + V  + CG S T  +C     L+ + +G D  +
Sbjct: 62  SNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHT-IVCTKAGRLYSFGAGSDGQL 120

Query: 589 CSG 591
            +G
Sbjct: 121 GTG 123


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 193/422 (45%), Gaps = 75/422 (17%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           +  G +  WG    DG+LG   H  G      ++   P A+ES   + V+ +A G  H+ 
Sbjct: 564 EQTGLILSWG-ANSDGVLG---HTGG------IEQLWPLAIESLSSVQVKMVAAGEFHSL 613

Query: 247 LVTKQGEVFSWGEELGGRLGHGV-----DSD---VSHPKLI---DALKNINVELVACGEH 295
            +T+ GEV S+G    G+ G  +      SD   V+ P+ I   D L+   V  +A G +
Sbjct: 614 CLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGY 673

Query: 296 HTCAVTLSGDMYTWG-GSNCNFG-----LLGHGN----------EMSLWLPKKLN-GPLE 338
           H+  VT  G++YT+G G     G      LG G           + S + PK      L 
Sbjct: 674 HSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALN 733

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRA 397
           G  V  V+CG +H+A VT  G L+T+G G  G LGHGD    +TP+ V++ +K    V+ 
Sbjct: 734 GQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKV 793

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE--------------- 442
           ACG  H+AAV             S+G ++T G  + G+LG GD+                
Sbjct: 794 ACGENHSAAVD------------SAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWS 841

Query: 443 -ARLVPTCVAALV--EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT 499
               +PT ++ L      F  ++CGH    A+T  G +YT G      LG P  +   PT
Sbjct: 842 CQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLG-PSGDVSEPT 900

Query: 500 RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD--RNFPSLVEAL 557
            +    + + V  +ACGD H A LT + ++Y WG    GRLG G + +     P LV A 
Sbjct: 901 HLS---SIDGVVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTEGVTRTPKLVPAF 957

Query: 558 KD 559
            D
Sbjct: 958 AD 959



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 173/383 (45%), Gaps = 69/383 (18%)

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           + G + SWG    G LGH    +   P  I++L ++ V++VA GE H+  +T +G++ ++
Sbjct: 565 QTGLILSWGANSDGVLGHTGGIEQLWPLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSF 624

Query: 310 GGSN---CNFGLLGHGNEMSLWL-----PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
           G ++   C   +        L       P  L   L    V S++ G +H+A+VT+ G+L
Sbjct: 625 GLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGEL 684

Query: 362 FTFGDGTFGVLGHGDRISVS--------------------TPREVDSLKGLRTVRAACGV 401
           +TFG G    LGH   +++                      P  + +L G    + ACG 
Sbjct: 685 YTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGR 744

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV-AALVEPNFCQ 460
           +H+A V E             G L+TWG G  G+LGHGD   +  P  V A + +    +
Sbjct: 745 FHSACVTE------------EGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVK 792

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-----------------ANGKLPTRVEG 503
           V+CG + + A+ + G +YT G    GQLG                       ++PT +  
Sbjct: 793 VACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSI 852

Query: 504 KLTKN--FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 561
              ++  FV +IACG    A +T+R  +YTWGKG    LG G + D + P+ + ++    
Sbjct: 853 LSVRHVQFV-DIACGHGFCAAITNRGLLYTWGKGTA--LGLGPSGDVSEPTHLSSIDG-- 907

Query: 562 VKSIVCGTSFTAAIC----LHKW 580
           V S+ CG    AA+     L+ W
Sbjct: 908 VVSVACGDIHAAALTDKGQLYMW 930



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 182/393 (46%), Gaps = 71/393 (18%)

Query: 121 SDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQG 180
           SD    A P  ++LP +    +V S+++GG      H   ++ D     L +        
Sbjct: 643 SDLAAVARPRPIVLPDDLRKKTVVSIAAGGY-----HSALVTADG---ELYTFGRGGEFQ 694

Query: 181 SGHDDGDSLGDVFIWGECTGDGILGGGIH-RSGSYAGVKMDSFVPKAVESAVV--LDVQN 237
            GHD   +LG+             G  +H RS S    +   F PK    + +    V+ 
Sbjct: 695 LGHDTVMALGEG------------GNALHYRSNS---AQTSYFQPKPTRLSALNGQVVKQ 739

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA-LKNINVELVACGEHH 296
           +ACG  H+A VT++G +++WG    G+LGHG  +D + PK ++A +K+  +  VACGE+H
Sbjct: 740 VACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKVACGENH 799

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEM-----------SLW-----LPKKLN-GPLEG 339
           + AV  +G +YT GG     G LG G+E            S W     +P  L+   +  
Sbjct: 800 SAAVDSAGVIYTTGGDES--GQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRH 857

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           +    ++CG    A +T+ G L+T+G GT   LG G    VS P  + S+ G+  V  AC
Sbjct: 858 VQFVDIACGHGFCAAITNRGLLYTWGKGT--ALGLGPSGDVSEPTHLSSIDGV--VSVAC 913

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG------DKEARLVPTCVAAL 453
           G  H AA+ +             G+L+ WG  + GRLG G       +  +LVP   A +
Sbjct: 914 GDIHAAALTD------------KGQLYMWGSSEAGRLGDGRSTEGVTRTPKLVP-AFADI 960

Query: 454 VEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
            +     VS G  H+L ++ T++    T+G+ +
Sbjct: 961 HQARCLGVSIGPRHALAISSTSSSLPKTIGAAL 993



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 143/308 (46%), Gaps = 63/308 (20%)

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH-GNEMSLWLPKKLNGPLEG 339
           +LKN + E +A  E++      +G + +WG ++   G+LGH G    LW P  +   L  
Sbjct: 546 SLKNKSEEFIA--EYYKNIKEQTGLILSWGANSD--GVLGHTGGIEQLW-PLAIES-LSS 599

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH--------GDRISVSTPREV---DS 388
           + V  V+ G +H+  +T  G++ +FG    G  G          D  +V+ PR +   D 
Sbjct: 600 VQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDD 659

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
           L+    V  A G +H+A V             + G+L+T+G G   +LGH          
Sbjct: 660 LRKKTVVSIAAGGYHSALVT------------ADGELYTFGRGGEFQLGHD--------- 698

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN 508
            V AL E        G++L     +    Y            PK     PTR+   L   
Sbjct: 699 TVMALGEG-------GNALHYRSNSAQTSYF----------QPK-----PTRLSA-LNGQ 735

Query: 509 FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVC 567
            V+++ACG +H A +T    +YTWG+GANG+LGHGD  D+  P  VEA +KDK +  + C
Sbjct: 736 VVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKVAC 795

Query: 568 GTSFTAAI 575
           G + +AA+
Sbjct: 796 GENHSAAV 803


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 176/359 (49%), Gaps = 26/359 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V ++ CG +H   +   G V++ G    G+LGH  +     P+ + AL    +  V+ GE
Sbjct: 36  VCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGH--EKPRKKPEHVVALDAQIIVAVSGGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT A+   G +++WG GS+   GL  +  E  + +P+ +   L  + ++ V+CG  H+ 
Sbjct: 94  SHTLALNDKGQIFSWGLGSDGQLGL--NNFEECVRVPRNIKC-LSDVQIAQVACGYRHSH 150

Query: 354 VVTSAGQLFTFGDGTFGVLG---HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            ++  GQ+F++G   FG LG   HG   S+STP+ + SL+G+   + + G  H+ A+   
Sbjct: 151 ALSKGGQVFSWGQNQFGQLGLGMHGS--SISTPQIIQSLQGIPFAQLSAGGAHSFAIT-- 206

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      SG +F WG    G+LG  D   R  P  + +L       VSCG   T A
Sbjct: 207 ----------LSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAA 256

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT-SRTEV 529
           LT  G V+T G+  YGQLG    N ++  R   +L  N V +I+CG  H    T S  ++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKM 316

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 588
           Y++G G NG+LG   T +R  P+ V+         I   +      C+H+  +G DQS 
Sbjct: 317 YSFGLGGNGQLGTRSTCNRKSPAPVKGPFVASAAPIESESE--QCFCIHRIYAGGDQSF 373



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 144/293 (49%), Gaps = 36/293 (12%)

Query: 153 GRTGHLKGLSGDTFRVSL-SSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G +F WG    DG LG     
Sbjct: 64  GQLGHEKPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWG-LGSDGQLG----- 117

Query: 211 SGSYAGVKMDSF-----VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 265
                   +++F     VP+ ++    + +  +ACG RH+  ++K G+VFSWG+   G+L
Sbjct: 118 --------LNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQL 169

Query: 266 GHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 324
           G G+  S +S P++I +L+ I    ++ G  H+ A+TLSG ++ WG +   FG LG  + 
Sbjct: 170 GLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRN--KFGQLGLNDT 227

Query: 325 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 384
              W P  L   L    V  VSCG  HTA +T  G +FTFG G +G LGH        PR
Sbjct: 228 NDRWFPALLKS-LRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPR 286

Query: 385 EVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG 437
           +V  L G    + +CG  HT A              SSGK++++G G  G+LG
Sbjct: 287 KVFELMGNIVTQISCGRQHTLAFTP-----------SSGKMYSFGLGGNGQLG 328



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N ++G LG G  +E  +  P+K      G  V  V CG  HT  +   G ++T
Sbjct: 1   MLCWG--NASYGQLGLGGIDEEIVIEPRKCEF-FHGKKVCDVGCGLKHTVFLLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH        P  V +L     V  + G  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--PRKKPEHVVALDAQIIVAVSGGESHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           ++F+WG G  G+LG  + +E   VP  +  L +    QV+CG+  + AL+  G V++ G 
Sbjct: 104 QIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQ 163

Query: 483 PVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
             +GQLG       + T ++   L      +++ G  H   +T    V+ WG+   G+LG
Sbjct: 164 NQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLG 223

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             DT+DR FP+L+++L+ ++V  + CG   TAA+
Sbjct: 224 LNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAAL 257


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 164/365 (44%), Gaps = 49/365 (13%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALK------------------NINVELVACGE 294
           EV++WG    G++GHG +     P LI  LK                   +    V CG 
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+       D++ WG G     G+    N+   ++  ++        V   S G  H  
Sbjct: 96  FHSVLFA-EQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIK------RVQMASAGGLHNI 148

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            +T  G ++T+G G FG LGHG       PR ++     R V  + G  H+AAV E    
Sbjct: 149 ALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTE---- 204

Query: 414 SSSSSNCSSGKLFTWG-DGDRGRLGHG-----DKEARLVPTCVAALVEPNFCQVSCGHSL 467
                   SG+L+TWG D   GRLGHG     D+ A   PT V AL  P    V CG   
Sbjct: 205 --------SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVP-IASVYCGGFF 255

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           T+ALT +G +++ G     +LG          +V   L    + ++ACG +H A LT   
Sbjct: 256 TMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDG 315

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
           +V TWG G NG+LGHG  ++   P++VEA+ DK    I CG ++TAAI     L+ W   
Sbjct: 316 KVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKN 375

Query: 584 VDQSM 588
            D  +
Sbjct: 376 RDYQL 380



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 127/365 (34%), Positives = 180/365 (49%), Gaps = 34/365 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           + CG  H+ L  +Q +VF WG+  GGRLG  +D++ +  K     +   V++ + G  H 
Sbjct: 91  VTCGLFHSVLFAEQ-DVFVWGKGDGGRLG--IDTEFNQYKPYVNPRIKRVQMASAGGLHN 147

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+T  G++YTWG     FG LGHG+     LP+ L GP +   +  VS G  H+A VT 
Sbjct: 148 IALTEVGNVYTWG--YGAFGALGHGSYERELLPRLLEGPWKD-RIVHVSAGGSHSAAVTE 204

Query: 358 AGQLFTFG-DGTFGVLGHG-----DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +G+L+T+G D   G LGHG     D  ++S P +V +L  +      CG + T A+ +  
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIASVYCGGFFTMALTK-- 261

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                     SG+L++WG      LGHG +     P  VAAL +    QV+CG     AL
Sbjct: 262 ----------SGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAAL 311

Query: 472 TTTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
           T  G V T G    GQLG     NGK P  VE    K     IACG    A +T   ++Y
Sbjct: 312 TQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKT-CTYIACGPAWTAAITENGDLY 370

Query: 531 TWGKGANGRLG-HGDTDDRNFPSLV---EALKDK---QVKSIVCGTSFTAAICLHKWVSG 583
           TWGK  + +LG  G  D++  P LV   +AL +K   +V  + CG +    I      + 
Sbjct: 371 TWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSRPKPAQ 430

Query: 584 VDQSM 588
           V QS+
Sbjct: 431 VTQSL 435



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 167/348 (47%), Gaps = 39/348 (11%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           DVF+WG+  GDG             G+  +    K   +  +  VQ  + GG H   +T+
Sbjct: 105 DVFVWGK--GDG----------GRLGIDTEFNQYKPYVNPRIKRVQMASAGGLHNIALTE 152

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            G V++WG    G LGHG       P+L++      +  V+ G  H+ AVT SG++YTW 
Sbjct: 153 VGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESGELYTW- 211

Query: 311 GSNCNFGLLGHGN-----EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           G +   G LGHGN     E +L  P K+   L+ + ++SV CG + T  +T +GQL+++G
Sbjct: 212 GRDEGEGRLGHGNPDIMDEGALSRPTKVQA-LD-VPIASVYCGGFFTMALTKSGQLWSWG 269

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
                 LGHG R +   P+ V +L+ +  V+ ACG +H AA+ +             GK+
Sbjct: 270 GNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQ------------DGKV 317

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            TWG G  G+LGHG  E    P  V A+ +     ++CG + T A+T  G +YT G    
Sbjct: 318 ITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRD 377

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEE-------IACGDYHVAVLTSR 526
            QLG P    +    V  +  +   E+       ++CG  H   + SR
Sbjct: 378 YQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 23/230 (10%)

Query: 190 GDVFIWGECTGDGILGGG---IHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           G+++ WG   G+G LG G   I   G+ +        P  V+ A+ + + ++ CGG    
Sbjct: 206 GELYTWGRDEGEGRLGHGNPDIMDEGALS-------RPTKVQ-ALDVPIASVYCGGFFTM 257

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
            +TK G+++SWG      LGHG  ++   PK++ AL+++ +  VACG  H  A+T  G +
Sbjct: 258 ALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKV 317

Query: 307 YTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            TWG G N   G LGHG   +   P  +   +     + ++CGP  TA +T  G L+T+G
Sbjct: 318 ITWGYGGN---GQLGHGTLENGKEPAIVEA-MADKTCTYIACGPAWTAAITENGDLYTWG 373

Query: 366 ---DGTFGVLGHGDR----ISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
              D   G+ G  D     + V  P+ +     +  +  +CG  H   +V
Sbjct: 374 KNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIV 423



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 29/189 (15%)

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF----------------- 458
           SS   +  +++ WG G  G++GHG ++   +P  ++ L    F                 
Sbjct: 28  SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87

Query: 459 -CQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 515
              V+CG  HS+  A      V+  G    G+LG      +    V  ++ +  V+  + 
Sbjct: 88  NVGVTCGLFHSVLFAEQD---VFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASA 142

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G  H   LT    VYTWG GA G LGHG  +    P L+E     ++  +  G S +AA+
Sbjct: 143 GGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAV 202

Query: 576 C----LHKW 580
                L+ W
Sbjct: 203 TESGELYTW 211


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +++ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  V+ G+ H  A++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 184/372 (49%), Gaps = 31/372 (8%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           +++ WG  T  G LG GGI        +   S +P   ++AV    Q +ACG RH   +T
Sbjct: 6   ELYCWGS-TSHGQLGLGGIEDEQ----ILTPSQIPWTPDTAV----QQVACGHRHTLFLT 56

Query: 250 KQGEVFSWGEELGGRLGHGVDSD---VSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
             G+V++ G     +LGH + +    +S   LI  L++  +  + CG  H+ A++  G +
Sbjct: 57  ATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQV 116

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            +WG ++C  G LGH  +  +    K+   L    V  ++CG  H+  +TS G+L+++G 
Sbjct: 117 LSWGDNDC--GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGS 174

Query: 367 GTFGVLG---HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
             +G LG     D    + P  + +L G+     ACG            G+ S     SG
Sbjct: 175 NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSG 222

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            +F WG  + G+LG  D+  R  PT +  L       V+CG   +V LT  G V+T G+ 
Sbjct: 223 AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG 282

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGH 542
            YGQLG   ++ ++  R+  +L  + + ++ACG+ H +A++ SR  VY +G G++G+LG 
Sbjct: 283 AYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGT 342

Query: 543 GDTDDRNFPSLV 554
             T     P +V
Sbjct: 343 RSTKSLMLPQVV 354



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 155/336 (46%), Gaps = 32/336 (9%)

Query: 253 EVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           E++ WG    G+LG G   D  +  P  I    +  V+ VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 311 GSNCNFGLLGHG-----NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            ++  +  LGH        MS   P  L   L+   +  + CG  H+  ++  GQ+ ++G
Sbjct: 66  SND--YSQLGHDLPTKRPRMS---PFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 120

Query: 366 DGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-G 423
           D   G LGH  D+  V  P+ V  L              T  VV++  G++ S   +S G
Sbjct: 121 DNDCGQLGHATDKEIVQLPKVVRQLV-------------TKTVVQIACGNNHSLALTSCG 167

Query: 424 KLFTWGDGDRGRLG---HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
           +L++WG    G+LG     D      P  +  L+      ++CG + +  ++ +G V+  
Sbjct: 168 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 227

Query: 481 GSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           G    GQLG + + N   PT+++   T   V  +ACGD     LT+   V+T G GA G+
Sbjct: 228 GRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 286

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LGHG + +   P +V  L    +  + CG   T A+
Sbjct: 287 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAL 322



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 85/175 (48%), Gaps = 11/175 (6%)

Query: 421 SSGK-LFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
           +SGK L+ WG    G+LG G  + E  L P+ +    +    QV+CGH  T+ LT TG V
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKV 61

Query: 478 YTMGSPVYGQLGD--PKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           Y  GS  Y QLG   P    ++ P  +  +L    + +I CG  H   L+   +V +WG 
Sbjct: 62  YACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 121

Query: 535 GANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGV 584
              G+LGH  D +    P +V  L  K V  I CG + + A+     L+ W S +
Sbjct: 122 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 176


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 159/329 (48%), Gaps = 25/329 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACG +H  ++   G V+S G    G+LG   D  +   + + AL    +  VACGE
Sbjct: 87  VREVACGHKHTLVLLANGSVYSCGANDFGQLGQ--DRSMRKLEQVAALSAHEIRAVACGE 144

Query: 295 HHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++ +G +++WG   CN  G LG G E    L  K+   L  +H+  ++CG  H  
Sbjct: 145 AHSLALSDAGQVFSWG---CNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCL 201

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVST---PREVDSLKGLRTVRAACGVWHTAAVVEV 410
            + + G+LF++G    G LG G R S      PR V  L G+     ACG  H+  +   
Sbjct: 202 ALANNGELFSWGGNASGQLGLG-RDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLT-- 258

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      SG +F WG    G+LG  D+  RL PT +  L       V CG + T A
Sbjct: 259 ----------PSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAA 308

Query: 471 LTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTE 528
           LT  G V+T G+  YGQLG   K N  +P RV  +L    + +++CG  H VA       
Sbjct: 309 LTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYAPQSGR 367

Query: 529 VYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
           +Y +G G +G+LG+G  +    P  V  L
Sbjct: 368 LYIFGLGMSGQLGNGTLESSALPVTVPGL 396



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 157/331 (47%), Gaps = 37/331 (11%)

Query: 137 ESACGSVNSL---------SSGGSD-GRTGHLKGLSGDTFRVSLSS-AVSSSSQGSGHDD 185
           E ACG  ++L         S G +D G+ G  + +       +LS+  + + + G  H  
Sbjct: 89  EVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSL 148

Query: 186 GDS-LGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
             S  G VF WG C  +G LG G                PK ++    L +  IACG  H
Sbjct: 149 ALSDAGQVFSWG-CNRNGQLGCGTEEESR--------LRPKVIKKLATLHIVQIACGAVH 199

Query: 245 AALVTKQGEVFSWGEELGGRLGHGVDS--DVSHPKLIDALKNINVELVACGEHHTCAVTL 302
              +   GE+FSWG    G+LG G DS  +   P+ +  L  + + LVACG  H+  +T 
Sbjct: 200 CLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTP 259

Query: 303 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           SG ++ WG ++C  G LG  ++     P  L  PL    +  V CG  HTA +T+ G +F
Sbjct: 260 SGTVFVWGRNSC--GQLGLSDQRDRLHPTVLK-PLRSQRIKHVCCGENHTAALTADGGVF 316

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           TFG GT+G LGHG +++ + PR V  L G    + +CG  HT A               S
Sbjct: 317 TFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAP-----------QS 365

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
           G+L+ +G G  G+LG+G  E+  +P  V  L
Sbjct: 366 GRLYIFGLGMSGQLGNGTLESSALPVTVPGL 396



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 31/333 (9%)

Query: 254 VFSWGEELGGRLG-----HGVDSD--VSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
           ++SWG    G LG      GVD++  VS P+ +       V  VACG  HT  +  +G +
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLN--GPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           Y+ G ++  FG LG    M     +KL     L    + +V+CG  H+  ++ AGQ+F++
Sbjct: 107 YSCGAND--FGQLGQDRSM-----RKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSW 159

Query: 365 GDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           G    G LG G +  S   P+ +  L  L  V+ ACG  H  A+             ++G
Sbjct: 160 GCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA------------NNG 207

Query: 424 KLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           +LF+WG    G+LG G        +P  V+ LV      V+CG   +V LT +G V+  G
Sbjct: 208 ELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWG 267

Query: 482 SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
               GQLG      +L   V   L    ++ + CG+ H A LT+   V+T+G G  G+LG
Sbjct: 268 RNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLG 327

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           HG   +   P  V  L    +  + CG   T A
Sbjct: 328 HGVKVNEAVPRRVVELMGTAISQLSCGRCHTVA 360



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 141/276 (51%), Gaps = 22/276 (7%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS-HPKLIDALKNINVELVAC 292
           +++ +ACG  H+  ++  G+VFSWG    G+LG G + +    PK+I  L  +++  +AC
Sbjct: 136 EIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIAC 195

Query: 293 GEHHTCAVTLSGDMYTWGGS---NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           G  H  A+  +G++++WGG+       G    GNE    LP++++  L G+ ++ V+CG 
Sbjct: 196 GAVHCLALANNGELFSWGGNASGQLGLGRDSTGNER---LPRRVSH-LVGVPLALVACGA 251

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            H+  +T +G +F +G  + G LG  D+     P  +  L+  R     CG  HTAA+  
Sbjct: 252 MHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALT- 310

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
                      + G +FT+G G  G+LGHG K    VP  V  L+     Q+SCG   TV
Sbjct: 311 -----------ADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTV 359

Query: 470 ALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 503
           A    +G +Y  G  + GQLG+    +  LP  V G
Sbjct: 360 AYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPG 395



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 139/279 (49%), Gaps = 25/279 (8%)

Query: 306 MYTWG-GSNCNFGLL----GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           +Y+WG G N   GL     G   E  +  P+++        V  V+CG  HT V+ + G 
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRR-FGTRAVREVACGHKHTLVLLANGS 105

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           +++ G   FG LG  DR S+    +V +L        ACG  H+ A+ +           
Sbjct: 106 VYSCGANDFGQLGQ-DR-SMRKLEQVAALSAHEIRAVACGEAHSLALSD----------- 152

Query: 421 SSGKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
            +G++F+WG    G+LG G ++E+RL P  +  L   +  Q++CG    +AL   G +++
Sbjct: 153 -AGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFS 211

Query: 480 MGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            G    GQLG   D   N +LP RV   L    +  +ACG  H   LT    V+ WG+ +
Sbjct: 212 WGGNASGQLGLGRDSTGNERLPRRV-SHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNS 270

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G+LG  D  DR  P++++ L+ +++K + CG + TAA+
Sbjct: 271 CGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 309


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 16/248 (6%)

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           G N N G LG G      +P+K+    EGI +  V+ G  HTA VT  G+LF +G G +G
Sbjct: 2   GRNQN-GQLGLGTTEDSLVPQKIQ-AFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYG 59

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LG GDR     P++V S+ G + V  ACG  HT +V             S G L+T+G 
Sbjct: 60  NLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV------------SSLGGLYTYGW 107

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG- 489
              G+LGHGD E RLVP  + AL   N  Q+S G   T+ALTT G +Y  G   +GQ+G 
Sbjct: 108 SKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGA 167

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
               +   P +++    +  ++ I+CG  H   +T +  V++WG+G NG+LGHG++ DRN
Sbjct: 168 GDNIDHCSPIQIKFPQDQKVIQ-ISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRN 226

Query: 550 FPSLVEAL 557
            P ++EAL
Sbjct: 227 TPMILEAL 234



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 126/238 (52%), Gaps = 15/238 (6%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   DS VP+ +++   + ++ +A G  H A VT+ GE+F WG    G LG G  +D   
Sbjct: 12  GTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLV 71

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P+ + ++    + +VACG  HT +V+  G +YT+G S   +G LGHG+     +P +L  
Sbjct: 72  PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWS--KYGQLGHGDFEDRLVPHRLE- 128

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            L G ++S +S G  HT  +T+ G+L+ +G   FG +G GD I   +P ++   +  + +
Sbjct: 129 ALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVI 188

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
           + +CG  HT AV +               +F+WG G  G+LGHG+   R  P  + AL
Sbjct: 189 QISCGWRHTLAVTDKQ------------NVFSWGRGTNGQLGHGESVDRNTPMILEAL 234



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 15/233 (6%)

Query: 257 WGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 316
           WG    G+LG G   D   P+ I A + I++++VA G  HT AVT  G+++ WG     +
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWG--RY 58

Query: 317 GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
           G LG G+     +P+K++  ++G  +  V+CG  HT  V+S G L+T+G   +G LGHGD
Sbjct: 59  GNLGLGDRNDRLVPQKVS-SVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGD 117

Query: 377 RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL 436
                 P  +++L+G    + + G  HT A+             + GKL+ WG    G++
Sbjct: 118 FEDRLVPHRLEALRGDNISQISGGWRHTMAL------------TTDGKLYGWGWNKFGQV 165

Query: 437 GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           G GD      P  +    +    Q+SCG   T+A+T   +V++ G    GQLG
Sbjct: 166 GAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLG 218



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 106/213 (49%), Gaps = 14/213 (6%)

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           +G    G LG G       P+++ + +G+     A G  HTAAV E             G
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTE------------DG 48

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           +LF WG G  G LG GD+  RLVP  V+++       V+CG   T+++++ G +YT G  
Sbjct: 49  ELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWS 108

Query: 484 VYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            YGQLG      +L P R+E  L  + + +I+ G  H   LT+  ++Y WG    G++G 
Sbjct: 109 KYGQLGHGDFEDRLVPHRLE-ALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGA 167

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           GD  D   P  ++  +D++V  I CG   T A+
Sbjct: 168 GDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAV 200



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 199 TGDGIL-GGGIHRSGSY-AGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFS 256
           T DG L G G ++ G   AG  +D   P  ++      V  I+CG RH   VT +  VFS
Sbjct: 149 TTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFS 208

Query: 257 WGEELGGRLGHGVDSDVSHPKLIDAL 282
           WG    G+LGHG   D + P +++AL
Sbjct: 209 WGRGTNGQLGHGESVDRNTPMILEAL 234


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 159/329 (48%), Gaps = 25/329 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACG +H  ++   G V+S G    G+LG   D  +   + + AL    +  VACGE
Sbjct: 93  VREVACGHKHTLVLLANGSVYSCGANDFGQLGQ--DRSMRKLEQVAALSAHEIRAVACGE 150

Query: 295 HHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A++ +G +++WG   CN  G LG G E    L  K+   L  +H+  ++CG  H  
Sbjct: 151 AHSLALSDAGQVFSWG---CNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCL 207

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVST---PREVDSLKGLRTVRAACGVWHTAAVVEV 410
            + + G+LF++G    G LG G R S      PR V  L G+     ACG  H+  +   
Sbjct: 208 ALANNGELFSWGGNASGQLGLG-RDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLT-- 264

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      SG +F WG    G+LG  D+  RL PT +  L       V CG + T A
Sbjct: 265 ----------PSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAA 314

Query: 471 LTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTE 528
           LT  G V+T G+  YGQLG   K N  +P RV  +L    + +++CG  H VA       
Sbjct: 315 LTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYAPQSGR 373

Query: 529 VYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
           +Y +G G +G+LG+G  +    P  V  L
Sbjct: 374 LYIFGLGMSGQLGNGTLESSALPVTVPGL 402



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 157/331 (47%), Gaps = 37/331 (11%)

Query: 137 ESACGSVNSL---------SSGGSD-GRTGHLKGLSGDTFRVSLSS-AVSSSSQGSGHDD 185
           E ACG  ++L         S G +D G+ G  + +       +LS+  + + + G  H  
Sbjct: 95  EVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSL 154

Query: 186 GDS-LGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
             S  G VF WG C  +G LG G                PK ++    L +  IACG  H
Sbjct: 155 ALSDAGQVFSWG-CNRNGQLGCGTEEESR--------LRPKVIKKLATLHIVQIACGAVH 205

Query: 245 AALVTKQGEVFSWGEELGGRLGHGVDS--DVSHPKLIDALKNINVELVACGEHHTCAVTL 302
              +   GE+FSWG    G+LG G DS  +   P+ +  L  + + LVACG  H+  +T 
Sbjct: 206 CLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTP 265

Query: 303 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           SG ++ WG ++C  G LG  ++     P  L  PL    +  V CG  HTA +T+ G +F
Sbjct: 266 SGTVFVWGRNSC--GQLGLSDQRDRLHPTVLK-PLRSQRIKHVCCGENHTAALTADGGVF 322

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           TFG GT+G LGHG +++ + PR V  L G    + +CG  HT A               S
Sbjct: 323 TFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAP-----------QS 371

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
           G+L+ +G G  G+LG+G  E+  +P  V  L
Sbjct: 372 GRLYIFGLGMSGQLGNGTLESSALPVTVPGL 402



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 31/333 (9%)

Query: 254 VFSWGEELGGRLG-----HGVDSD--VSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
           ++SWG    G LG      GVD++  VS P+ +       V  VACG  HT  +  +G +
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLN--GPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           Y+ G ++  FG LG    M     +KL     L    + +V+CG  H+  ++ AGQ+F++
Sbjct: 113 YSCGAND--FGQLGQDRSM-----RKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSW 165

Query: 365 GDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           G    G LG G +  S   P+ +  L  L  V+ ACG  H  A+             ++G
Sbjct: 166 GCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA------------NNG 213

Query: 424 KLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           +LF+WG    G+LG G        +P  V+ LV      V+CG   +V LT +G V+  G
Sbjct: 214 ELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWG 273

Query: 482 SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
               GQLG      +L   V   L    ++ + CG+ H A LT+   V+T+G G  G+LG
Sbjct: 274 RNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLG 333

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           HG   +   P  V  L    +  + CG   T A
Sbjct: 334 HGVKVNEAVPRRVVELMGTAISQLSCGRCHTVA 366



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 141/273 (51%), Gaps = 16/273 (5%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS-HPKLIDALKNINVELVAC 292
           +++ +ACG  H+  ++  G+VFSWG    G+LG G + +    PK+I  L  +++  +AC
Sbjct: 142 EIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIAC 201

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G  H  A+  +G++++WGG+      LG  +  +  LP++++  L G+ ++ V+CG  H+
Sbjct: 202 GAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSH-LVGVPLALVACGAMHS 260

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T +G +F +G  + G LG  D+     P  +  L+  R     CG  HTAA+     
Sbjct: 261 VGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALT---- 316

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   + G +FT+G G  G+LGHG K    VP  V  L+     Q+SCG   TVA  
Sbjct: 317 --------ADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYA 368

Query: 473 -TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 503
             +G +Y  G  + GQLG+    +  LP  V G
Sbjct: 369 PQSGRLYIFGLGMSGQLGNGTLESSALPVTVPG 401



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 139/279 (49%), Gaps = 25/279 (8%)

Query: 306 MYTWG-GSNCNFGLL----GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           +Y+WG G N   GL     G   E  +  P+++        V  V+CG  HT V+ + G 
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRR-FGTRAVREVACGHKHTLVLLANGS 111

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           +++ G   FG LG  DR S+    +V +L        ACG  H+ A+ +           
Sbjct: 112 VYSCGANDFGQLGQ-DR-SMRKLEQVAALSAHEIRAVACGEAHSLALSD----------- 158

Query: 421 SSGKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
            +G++F+WG    G+LG G ++E+RL P  +  L   +  Q++CG    +AL   G +++
Sbjct: 159 -AGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFS 217

Query: 480 MGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            G    GQLG   D   N +LP RV   L    +  +ACG  H   LT    V+ WG+ +
Sbjct: 218 WGGNASGQLGLGRDSTGNERLPRRV-SHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNS 276

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G+LG  D  DR  P++++ L+ +++K + CG + TAA+
Sbjct: 277 CGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 315


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 167/330 (50%), Gaps = 18/330 (5%)

Query: 205 GGGIHRSGSYAGVKMDSFV-PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           G  +H      G++ +  + P+ ++ +   +VQ  ACGG H  L+TK G++++ G    G
Sbjct: 7   GSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHG 66

Query: 264 RLGHGVDSDVS-HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
           +LGH  ++  +  P+ I AL+N  V  V+CG  H+ A+T  G +++WG SN   G LGH 
Sbjct: 67  QLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG-SNAT-GQLGHD 124

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISVS 381
            +M  +   ++   +    V  +SCG  H   +T++G+LF +G   +G LG G     V 
Sbjct: 125 LDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVP 184

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
           T   V SL G+     ACG  H+ AV              SG +F WG    G+LG  D 
Sbjct: 185 TATLVKSLAGIPIAFIACGGNHSFAV------------SKSGAIFGWGKNTFGQLGLNDL 232

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV 501
           ++R  PT +  L       +SCG   +V LT  G V+T G   +GQLG      ++  R+
Sbjct: 233 DSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRM 292

Query: 502 EGKLTKNFVEEIACGDYH-VAVLTSRTEVY 530
             +L  + + +IACG  H +A + SR +VY
Sbjct: 293 VFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 158/330 (47%), Gaps = 26/330 (7%)

Query: 254 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           ++ WG  + G LG G   +  V  P+ +D  +  NV+  ACG  HT  +T  G +YT G 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCG- 61

Query: 312 SNCNFGLLGHGNEMSLWLPKK---LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            N + G LGH       LP K       LE   V+ VSCG  H+  +T+ GQLF++G   
Sbjct: 62  -NNDHGQLGHDTNN---LPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNA 117

Query: 369 FGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            G LGH  D +S   PR + S+     V+ +CG  H  A+             +SG+LF 
Sbjct: 118 TGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALT------------NSGELFA 165

Query: 428 WGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG  + G+LG G    ++   T V +L       ++CG + + A++ +G ++  G   +G
Sbjct: 166 WGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 225

Query: 487 QLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           QLG    + +  PT+++  L    V  I+CGD     LT    V+T G G  G+LGHG  
Sbjct: 226 QLGLNDLDSRCYPTQLK-TLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTH 284

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +   P +V  L   ++  I CG   T A 
Sbjct: 285 GNEILPRMVFELMGSKITQIACGRKHTLAF 314


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 168/345 (48%), Gaps = 28/345 (8%)

Query: 191 DVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           +++ WG  T  G LG GGI           +  +P+ ++      V+ IACG  H  L+T
Sbjct: 27  NMYCWGS-TVYGELGLGGIEDE--------NILMPRELDFQKATAVEQIACGETHTVLIT 77

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           K GEVFS G    G+LGH  +      ++I  L     +  ACG  H+ AV   G ++ W
Sbjct: 78  KDGEVFSCGNNDSGQLGH--EKPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCW 135

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G SN + G LG G  +++    ++   L    V  ++CG  HT  +T+ G+L+ +G  + 
Sbjct: 136 G-SNAD-GQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSD 193

Query: 370 GVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG G  + + T P+ +  L  +     ACG +H+  V +            SG +F W
Sbjct: 194 GQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSK------------SGAVFGW 241

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G    G+LG  D   + VP  +  L       V+CG   +V LT  G V+T G+ +YGQL
Sbjct: 242 GRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQL 301

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTW 532
           G    + ++  R   +L  + V +I+CG  H +A++ SR +VY W
Sbjct: 302 GHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 126/245 (51%), Gaps = 28/245 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+++ WG    DG LG G         VK+++  PK +     + +  IACGG H+ +V+
Sbjct: 183 GELYAWGS-NSDGQLGLG-------QDVKIET-RPKLITGLATIPIAFIACGGYHSIVVS 233

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           K G VF WG    G+LG    SD   P L+  L+N  V+ VACGE  +  +T+ G ++T 
Sbjct: 234 KSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTC 293

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G     +G LGHG   +  LP+++   L G  V+ +SCG  HT A+V S G+++ +G G 
Sbjct: 294 GAG--MYGQLGHGANSNEILPRQII-ELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGG 350

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT---AAVVEVMVGSSSSSNCSSGKL 425
            G LG     SV+TP+ V             G W +   +  +EV   SS+S +C    +
Sbjct: 351 SGQLGSQTARSVATPQMV------------LGPWSSKNRSLAMEVDSASSTSEDCVVKHI 398

Query: 426 FTWGD 430
           F+ GD
Sbjct: 399 FSGGD 403


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 32/388 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   ++           G +     PK   S    D Q I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLV----------EGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG---EHHTCAVTLSGDMY 307
            G V + G+   GRLG G  ++ S  K +    + +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WG  + ++G LGHGN  +   PK + GPL+G  V  VS G  H+A VT  G+L+T+G+G
Sbjct: 481 SWG--DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            FG LGHGD  S + P  V  +  +  V  +CG  HT A+ +               +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           +G GD G+LGHGD      P  + AL      +V  G   ++ALT+TG VY  G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TD 546
            G  +A    P  +E +L    + +I+ GD H   L+   EVY WG  + G+ G G+ T 
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               P  V  L    ++ I  GTS + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 40/306 (13%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           V+ + ++Y WG SN +  L+  G +  +  PK      +     ++  G + T V+++ G
Sbjct: 368 VSETCEVYVWG-SNSSHQLV-EGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-----SLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +   G G++G LG GD  + ST +++      S+K + + + + G  HT A        
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTT 473
                 + G++F+WGDGD G+LGHG+   +  P  +   ++      VS G+  + A+T 
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVY 530
            G +YT G   +G+LG   +N + +PT V  K   N V E++CG  H   L+   RT V+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VW 584

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQ 586
           ++G G NG+LGHGDT+    P ++EAL+   ++ +  G+  + A+     ++ W  G   
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA-- 642

Query: 587 SMCSGC 592
             C GC
Sbjct: 643 --CLGC 646



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 280
           + PK +E+   + ++ +  G + +  +T  G+V++WG   G  LG G  ++    PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 339
            L    +  ++ G+ H  +++   ++Y WG  N + G  G GN    +  PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLSLSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717

Query: 340 IHVSSVSCGPWHTAVVTS 357
           I +  +S G  H+   T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 163/347 (46%), Gaps = 32/347 (9%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G +  +VT+  EV+ WG     +L  G    +  PKL  A  N   + +  G++ T  V 
Sbjct: 367 GENGNMVTENSEVYVWGSNSSHQLAEGSQEKILQPKLSPAFAN--AQTIEAGQYCTFVVY 424

Query: 302 LSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGI--HVSSVSCGPWHTAVVTSA 358
             G +   G GS    GL    N+ +L   KKLN     +   +SS      HT  +T+ 
Sbjct: 425 SDGTVRACGKGSYGRLGLGDSNNQTTL---KKLNFDHRYVIRKISSSKGSDGHTLALTAD 481

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVD-SLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           G++F++GDG +G LGHG+  +   P+++  +L+G      + G  H+AAV E        
Sbjct: 482 GEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTE-------- 533

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARL---------VPTCVAALVEPNFCQVSCGHSLT 468
                G+LFTWG+GD GRLGHGD   +L          P  + ALV     +V CG   +
Sbjct: 534 ----DGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSS 589

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           +ALT+TG ++  G       G P++    P  VE +L    + ++ACGD H   LT   E
Sbjct: 590 LALTSTGQLFAWGCGACLGCGSPESTALRPKLVE-ELANTRIVDVACGDSHCLALTHDNE 648

Query: 529 VYTWGKGANGRLGHGDTDDR-NFPSLVEALKDKQVKSIVCGTSFTAA 574
           VY WG  A G+ G G +      P  V  L    V  I  GTS + A
Sbjct: 649 VYAWGNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLA 695



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 152/320 (47%), Gaps = 37/320 (11%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           + Q I  G     +V   G V + G+   GRLG G  ++ +  K ++      +  ++  
Sbjct: 409 NAQTIEAGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSS 468

Query: 294 ---EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
              + HT A+T  G++++WG  + ++G LGHGN  +   PK++ G L+G  V S+S G  
Sbjct: 469 KGSDGHTLALTADGEVFSWG--DGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYR 526

Query: 351 HTAVVTSAGQLFTFGDGTFG---------VLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           H+A VT  G+LFT+G+G +G          LGHGD   V  P+ +++L GL   +  CG 
Sbjct: 527 HSAAVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCG- 585

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR-LVPTCVAALVEPNFCQ 460
                        SS +  S+G+LF WG G    LG G  E+  L P  V  L       
Sbjct: 586 -----------SQSSLALTSTGQLFAWGCG--ACLGCGSPESTALRPKLVEELANTRIVD 632

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDY 518
           V+CG S  +ALT    VY  G+   GQ G   +   +  P +V G L    V +I+ G  
Sbjct: 633 VACGDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPITKPKKVVG-LDGVTVHQISAGTS 691

Query: 519 H----VAVLTSRTEVYTWGK 534
           H     A+ T R +V  W +
Sbjct: 692 HSLAWTALPTDR-QVVAWHR 710



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 35/291 (12%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           VT + ++Y WG ++ +   L  G++  +  PK L+      +  ++  G + T VV S G
Sbjct: 373 VTENSEVYVWGSNSSH--QLAEGSQEKILQPK-LSPAFA--NAQTIEAGQYCTFVVYSDG 427

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVGSSS 416
            +   G G++G LG GD  + +T +++  D    +R + ++ G   HT A+         
Sbjct: 428 TVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGHTLALT-------- 479

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTTTG 475
               + G++F+WGDGD G+LGHG+   +  P  +   ++    + +S G+  + A+T  G
Sbjct: 480 ----ADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDG 535

Query: 476 HVYTMGSPVYGQLGDPKANGKL----------PTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            ++T G   YG+LG   +N KL          P  +E  L   ++ ++ CG      LTS
Sbjct: 536 ELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEA-LVGLYIRKVCCGSQSSLALTS 594

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAI 575
             +++ WG GA   LG G  +     P LVE L + ++  + CG S   A+
Sbjct: 595 TGQLFAWGCGAC--LGCGSPESTALRPKLVEELANTRIVDVACGDSHCLAL 643



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 119/267 (44%), Gaps = 51/267 (19%)

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           +VT   +++ +G  +   L  G +  +  P+   +    +T+ A  G + T  V      
Sbjct: 372 MVTENSEVYVWGSNSSHQLAEGSQEKILQPKLSPAFANAQTIEA--GQYCTFVVY----- 424

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF-----------CQVS 462
                  S G +   G G  GRLG GD   +        L + NF            + S
Sbjct: 425 -------SDGTVRACGKGSYGRLGLGDSNNQ------TTLKKLNFDHRYVIRKISSSKGS 471

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVA 521
            GH  T+ALT  G V++ G   YG+LG   ++  K P +++G L    V+ I+ G  H A
Sbjct: 472 DGH--TLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSA 529

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTD--------DRNF-PSLVEALKDKQVKSIVCGTSFT 572
            +T   E++TWG+G  GRLGHGD++        +R + P ++EAL    ++ + CG+  +
Sbjct: 530 AVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSS 589

Query: 573 AAIC----LHKWVSGVDQSMCSGCRIP 595
            A+     L  W  G     C GC  P
Sbjct: 590 LALTSTGQLFAWGCGA----CLGCGSP 612


>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
          Length = 1302

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 171/338 (50%), Gaps = 25/338 (7%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +I+CG  H A+VT  G+++ +G    G+LG G  + V  P  + ALK    +L  CG +H
Sbjct: 56  HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNH 115

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T +G+MY  GG+    G LG G+         ++       +  ++ G + +A VT
Sbjct: 116 TLVYTENGNMYAAGGN--GEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVT 173

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             GQLF +GD + G +G  D+  VS P +VD  K + ++  +CG +H+A +         
Sbjct: 174 EDGQLFVWGDNSEGQIGLADKTYVSVPCQVDVGKPISSI--SCGYYHSAFIT-------- 223

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEAR--LVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                 G+L+T+G+ + G+LG   ++ +   VP  V  ++E    +V+CG   TV LT T
Sbjct: 224 ----GDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTET 278

Query: 475 GHVYTMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
           G VYT G   YGQLG      K  +P  V+  L K  +  I CG+ H AV+     ++T+
Sbjct: 279 G-VYTFGLGQYGQLGHGTLLFKTSVPKSVK-HLRKCKIRNITCGESHTAVIAENGLMFTF 336

Query: 533 GKGANGRLGHGDTDDRNF--PSLVEALKDKQVKSIVCG 568
           G G +G+LG G+ +  N   P+L        V  + CG
Sbjct: 337 GDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 374



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 142/296 (47%), Gaps = 31/296 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHT 297
            CG  H  + T+ G +++ G    G+LG G   + +   LI    N + ++ +A G + +
Sbjct: 110 VCGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTS 169

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            AVT  G ++ WG +  + G +G  ++  + +P +++    G  +SS+SCG +H+A +T 
Sbjct: 170 AAVTEDGQLFVWGDN--SEGQIGLADKTYVSVPCQVDV---GKPISSISCGYYHSAFITG 224

Query: 358 AGQLFTFGD---GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
            G+L+TFG+   G  G+L    + S   P+ V  +   +  + ACG  HT  + E  V  
Sbjct: 225 DGELYTFGEPENGKLGLLPEQLKNS-RVPQPVLGIME-KVNKVACGGEHTVVLTETGV-- 280

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTT 473
                      +T+G G  G+LGHG    +  VP  V  L +     ++CG S T  +  
Sbjct: 281 -----------YTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIAE 329

Query: 474 TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVLTS 525
            G ++T G   +G+LG  + N     + +  L  NF    V  +ACG  H+ V  +
Sbjct: 330 NGLMFTFGDGRHGKLGLGEEN--FANQFDPALCSNFLSFTVLLVACGGCHMLVFAT 383



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 32/266 (12%)

Query: 146 LSSGGSDGRTG-HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGIL 204
           L  G ++ RT  HL     +  ++   +A S +S     D     G +F+WG+       
Sbjct: 136 LGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTED-----GQLFVWGD------- 183

Query: 205 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 264
                 S    G+   ++V    +  V   + +I+CG  H+A +T  GE++++GE   G+
Sbjct: 184 -----NSEGQIGLADKTYVSVPCQVDVGKPISSISCGYYHSAFITGDGELYTFGEPENGK 238

Query: 265 LG----HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 320
           LG       +S V  P ++  ++ +N   VACG  HT  +T +G +YT+G     +G LG
Sbjct: 239 LGLLPEQLKNSRVPQP-VLGIMEKVNK--VACGGEHTVVLTETG-VYTFGLG--QYGQLG 292

Query: 321 HGNEM-SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           HG  +    +PK +   L    + +++CG  HTAV+   G +FTFGDG  G LG G+   
Sbjct: 293 HGTLLFKTSVPKSVK-HLRKCKIRNITCGESHTAVIAENGLMFTFGDGRHGKLGLGEENF 351

Query: 380 VST--PREVDSLKGLRTVRAACGVWH 403
            +   P    +      +  ACG  H
Sbjct: 352 ANQFDPALCSNFLSFTVLLVACGGCH 377



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 3/117 (2%)

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
           +SCG   T  +T  G +Y  GS  +GQLG   K     PT V+  L     +   CG  H
Sbjct: 57  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKA-LKPEKTKLAVCGRNH 115

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDK-QVKSIVCGTSFTAAI 575
             V T    +Y  G    G+LG GDT++R    L+    ++ ++K +  G+  +AA+
Sbjct: 116 TLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAV 172


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 181/377 (48%), Gaps = 46/377 (12%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +++ WG  +   +  GGI         KM    P   +SAV      IACG RH   +T 
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKM----PWQPDSAV----NQIACGHRHTLFLTA 53

Query: 251 QGEVFSWGEELGGRLGHGVDSD--VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            G+V++ G     +LGH + S   +  P+L+D +    +  +ACG  H+ A+T  G + +
Sbjct: 54  SGKVYACGSNDYAQLGHELSSKRPLQIPELVDCV----ITQIACGSRHSMALTEWGQVLS 109

Query: 309 WGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG + C  G LGH ++  +  LPK +   L    V  ++CG  H+  +T  G+L+ +G  
Sbjct: 110 WGDNEC--GQLGHASDQDVVQLPKTVRA-LVSKTVVQIACGNNHSLALTCCGELYAWGSN 166

Query: 368 TFGVLGHGDRISVSTPREV---------DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            +G LG      V TP E+          +L G+     ACG            G+ S  
Sbjct: 167 IYGQLG------VKTPSELGQCNAPMLLTTLLGIPVRAIACG------------GNHSFL 208

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
              S  +F WG  + G+LG  D+  R  PT +  L       V+CG   +V LT  G V+
Sbjct: 209 ISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVF 268

Query: 479 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGAN 537
           T G+  YGQLG      ++  R+  +L  + + ++ACG+ H +A++ +R  +Y +G G++
Sbjct: 269 TCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSS 328

Query: 538 GRLGHGDTDDRNFPSLV 554
           G+LG  +T   N P +V
Sbjct: 329 GQLGTRNTKSLNLPQMV 345



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 134/270 (49%), Gaps = 32/270 (11%)

Query: 136 SESACGSVNS---------LSSGGSD-GRTGHLKGLS----GDTFRVSLSSAVSSSSQGS 181
           ++ ACGS +S         LS G ++ G+ GH           T R  +S  V   + G+
Sbjct: 89  TQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGN 148

Query: 182 GHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC 240
            H    +  G+++ WG      I G    ++ S  G       P  + + + + V+ IAC
Sbjct: 149 NHSLALTCCGELYAWG----SNIYGQLGVKTPSELG---QCNAPMLLTTLLGIPVRAIAC 201

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           GG H+ L++K   VF WG    G+LG   +++ ++P  +  L+ + V  VACG+  +  +
Sbjct: 202 GGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFL 261

Query: 301 TLSGDMYTWGGSNCNFGLLGH---GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVT 356
           T  G ++T G     +G LGH   GNEM   LP+ +   L G  +S V+CG  HT A+V 
Sbjct: 262 TNEGGVFTCGAG--AYGQLGHGFCGNEM---LPRMVM-ELMGSTISQVACGNRHTLAMVP 315

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
           + G+++ FG G+ G LG  +  S++ P+ V
Sbjct: 316 ARGRIYGFGLGSSGQLGTRNTKSLNLPQMV 345



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 22/237 (9%)

Query: 360 QLFTFGDGTFGVLGHG--DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           +L+ +G+ + G LG G  +   + TP ++         + ACG  HT  +          
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLT--------- 52

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
              +SGK++  G  D  +LGH     R  P  +  LV+    Q++CG   ++ALT  G V
Sbjct: 53  ---ASGKVYACGSNDYAQLGHELSSKR--PLQIPELVDCVITQIACGSRHSMALTEWGQV 107

Query: 478 YTMGSPVYGQLGDPKANG--KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            + G    GQLG        +LP  V   ++K  V+ IACG+ H   LT   E+Y WG  
Sbjct: 108 LSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQ-IACGNNHSLALTCCGELYAWGSN 166

Query: 536 ANGRLGHGDTDDR---NFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMC 589
             G+LG     +    N P L+  L    V++I CG + +  I     V G  ++ C
Sbjct: 167 IYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNC 223


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 168/330 (50%), Gaps = 18/330 (5%)

Query: 205 GGGIHRSGSYAGVKMDSFV-PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           G  +H      G++ +  + P+ ++ +   +VQ  ACGG H  L+TK G++++ G    G
Sbjct: 7   GSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHG 66

Query: 264 RLGHGVDSDVS-HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
           +LGH  ++  +  P+ I AL+N  V  V+CG  H+ A+T  G +++WG SN   G LGH 
Sbjct: 67  QLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG-SNAT-GQLGHD 124

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISVS 381
            +M  +   ++   +    V  +SCG  H   +T++G+LF +G   +G LG G     V 
Sbjct: 125 LDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVP 184

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
           T   V SL G+     ACG  H+ AV +            SG +F WG    G+LG  D 
Sbjct: 185 TATLVKSLAGIPIAFIACGGNHSFAVSK------------SGAIFGWGKNTFGQLGLNDL 232

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV 501
           ++R  PT +  L       +SCG   +V LT  G V+T G   +GQLG      ++  R+
Sbjct: 233 DSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRM 292

Query: 502 EGKLTKNFVEEIACGDYH-VAVLTSRTEVY 530
             +L  + + +IACG  H +A + SR +VY
Sbjct: 293 VFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 158/330 (47%), Gaps = 26/330 (7%)

Query: 254 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           ++ WG  + G LG G   +  V  P+ +D  +  NV+  ACG  HT  +T  G +YT G 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCG- 61

Query: 312 SNCNFGLLGHGNEMSLWLPKK---LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            N + G LGH       LP K       LE   V+ VSCG  H+  +T+ GQLF++G   
Sbjct: 62  -NNDHGQLGHDTNN---LPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNA 117

Query: 369 FGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            G LGH  D +S   PR + S+     V+ +CG  H  A+             +SG+LF 
Sbjct: 118 TGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALT------------NSGELFA 165

Query: 428 WGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG  + G+LG G    ++   T V +L       ++CG + + A++ +G ++  G   +G
Sbjct: 166 WGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 225

Query: 487 QLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           QLG    + +  PT+++  L    V  I+CGD     LT    V+T G G  G+LGHG  
Sbjct: 226 QLGLNDLDSRCYPTQLK-TLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTH 284

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +   P +V  L   ++  I CG   T A 
Sbjct: 285 GNEILPRMVFELMGSKITQIACGRKHTLAF 314


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 181/368 (49%), Gaps = 30/368 (8%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           ++ WG+ +   +  GGI              +P  +E      VQ IACG RH   +T  
Sbjct: 3   LYCWGDASHGQLGLGGIENE--------QILLPSQIEFKPDSPVQQIACGHRHTLFLTAN 54

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G+V++ G     +LGH + +    P  I  L+   V  +ACG  H+ A+T  G + +WG 
Sbjct: 55  GQVYACGNNDHHQLGHELPT--KRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGD 112

Query: 312 SNCNFGLLGHGNEMSLW-LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           ++C  G +GH  +  +  LPK L   L    V  ++CG  H+  +TS G+L+++G   +G
Sbjct: 113 NDC--GQVGHSTDNDVIELPKILRF-LVSRTVVQIACGNNHSLALTSCGELYSWGSNIYG 169

Query: 371 VLG---HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            LG     D    + P  + ++ G+     ACG            G+ S     S  +F 
Sbjct: 170 QLGVQSPKDLPHSNAPLRLTTILGIPLATIACG------------GNHSFLISKSSAVFG 217

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG    G+LG  D++ R  P+ + ++       V+CG   +V LT  G V+T G+  YGQ
Sbjct: 218 WGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQ 277

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG   +N ++  R+  +L  + + ++ACG+ H +A++ S   VY++G GA+G+LG  +T 
Sbjct: 278 LGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTI 337

Query: 547 DRNFPSLV 554
            +  P +V
Sbjct: 338 SQTLPKVV 345



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 34/270 (12%)

Query: 137 ESACGSVNS---------LSSGGSD-GRTGHLKGLSGD--------TFRVSLSSAVSSSS 178
           + ACGS +S         LS G +D G+ GH    S D          R  +S  V   +
Sbjct: 90  QIACGSRHSMALTEWGQILSWGDNDCGQVGH----STDNDVIELPKILRFLVSRTVVQIA 145

Query: 179 QGSGHDDG-DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQN 237
            G+ H     S G+++ WG     G LG    +   ++        P  + + + + +  
Sbjct: 146 CGNNHSLALTSCGELYSWGSNIY-GQLGVQSPKDLPHSNA------PLRLTTILGIPLAT 198

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           IACGG H+ L++K   VF WG+   G+LG   + + ++P  + +++ + V  V CG+ ++
Sbjct: 199 IACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYS 258

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVT 356
             +T  G ++T G    N+G LGHG   +  +P+ +   L G  ++ V+CG  HT A+V 
Sbjct: 259 VFLTNEGGVFTCGAG--NYGQLGHGASNNEMIPRMV-IELMGSTITQVACGNRHTLALVP 315

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
           S G++++FG G  G LG  + IS + P+ V
Sbjct: 316 SGGRVYSFGLGASGQLGTRNTISQTLPKVV 345


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 117/349 (33%), Positives = 176/349 (50%), Gaps = 30/349 (8%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           +++  A G RH+ L+   G V S G+   G+LG         PK I AL+ + VELV+CG
Sbjct: 35  ELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCG 94

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           + H+ AV   G ++ WG GS    G +G   E++L +P+K+   L GI +  VSCG +H+
Sbjct: 95  KEHSLAVCYKGRVFAWGAGSEGQLG-IGEFKEINL-IPQKIK-TLTGIKIIQVSCGNYHS 151

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             ++  GQ+F++G  + G LG G  + S ++P+ V SL G+   + A G  H+ A+    
Sbjct: 152 LALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFAL---- 207

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                     SG  F WG  + G+L   G         P  V+AL       +SCGH  T
Sbjct: 208 --------SLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHT 259

Query: 469 VALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSR 526
             LT  G V+T G    GQLG  P A    P  +EG   +  V +I CG YH +A + + 
Sbjct: 260 AVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEG--IEGLVSQIDCGSYHTLAYVYTT 317

Query: 527 TEVYTWGKGANGR--LGHGD--TDDRNFPSLV--EALKDKQVKSIVCGT 569
            +V ++G+G + +    H +  T++ +   L+  E L D QVK I  GT
Sbjct: 318 GQVVSFGRGPSCKSCSNHPELLTENTDVTCLISAERLVDVQVKHIFAGT 366



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 138/264 (52%), Gaps = 22/264 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDAL 282
           PK +++   L V+ ++CG  H+  V  +G VF+WG    G+LG G   +++  P+ I  L
Sbjct: 77  PKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTL 136

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
             I +  V+CG +H+ A++  G +++WG +  + G LG G E+ S   P+++   L+GI 
Sbjct: 137 TGIKIIQVSCGNYHSLALSEDGQVFSWGSN--SHGQLGLGKELPSQASPQRVRS-LDGIP 193

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVST--PREVDSLKGLRTVRAA 398
           ++ V+ G  H+  ++ +G  F +G    G L   G  + V +  PR V +LK L  V  +
Sbjct: 194 LAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYIS 253

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HTA + +            +GK+FT+GD   G+LGH     +  P  +   +E   
Sbjct: 254 CGHEHTAVLTQ------------NGKVFTFGDNSCGQLGHSPTAEKTGPQLMEG-IEGLV 300

Query: 459 CQVSCGHSLTVA-LTTTGHVYTMG 481
            Q+ CG   T+A + TTG V + G
Sbjct: 301 SQIDCGSYHTLAYVYTTGQVVSFG 324



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 18/247 (7%)

Query: 164 DTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV 223
           +T RV L S     S    +      G VF WG    +G LG G          K  + +
Sbjct: 84  ETLRVELVSCGKEHSLAVCYK-----GRVFAWG-AGSEGQLGIG--------EFKEINLI 129

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDAL 282
           P+ +++   + +  ++CG  H+  +++ G+VFSWG    G+LG G +    + P+ + +L
Sbjct: 130 PQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSL 189

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGIH 341
             I +  VA G  H+ A++LSG  + WG +N       G    +  + P+ ++  L+ + 
Sbjct: 190 DGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSA-LKTLG 248

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HTAV+T  G++FTFGD + G LGH      + P+ ++ ++GL + +  CG 
Sbjct: 249 VVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGLVS-QIDCGS 307

Query: 402 WHTAAVV 408
           +HT A V
Sbjct: 308 YHTLAYV 314



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ S G + + GD + G LG         P+ + +L+ LR    +
Sbjct: 33  GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVS 92

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE  L+P  +  L    
Sbjct: 93  CGKEHSLAV------------CYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIK 140

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCG+  ++AL+  G V++ GS  +GQLG  K   +LP++   +  ++     + ++
Sbjct: 141 IIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGK---ELPSQASPQRVRSLDGIPLAQV 197

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD---DRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG    G+L    ++       P  V ALK   V  I CG  
Sbjct: 198 AAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHE 257

Query: 571 FTAAI 575
            TA +
Sbjct: 258 HTAVL 262



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 11/144 (7%)

Query: 174 VSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
           ++  + G  H    SL G  F WG      +   G       + V + S+ P++V +   
Sbjct: 194 LAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFG-------SNVPVQSYKPRSVSALKT 246

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L V  I+CG  H A++T+ G+VF++G+   G+LGH   ++ + P+L++ ++ + V  + C
Sbjct: 247 LGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGL-VSQIDC 305

Query: 293 GEHHTCA-VTLSGDMYTWG-GSNC 314
           G +HT A V  +G + ++G G +C
Sbjct: 306 GSYHTLAYVYTTGQVVSFGRGPSC 329


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 180/356 (50%), Gaps = 28/356 (7%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+ +E+   L +   A G RH+ L+     V+S G+   G+LG         P+ I AL 
Sbjct: 12  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 71

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
            ++++LV+CG+ H+ AV   G ++TWG GS    G +G   E+S ++P K+N  L GI +
Sbjct: 72  TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLG-IGESKEIS-FMPTKIN-SLAGIKI 128

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGV 401
             VSCG +H+  ++  GQ+F++G    G LG G+ + S ++P++V SL+G+   + A G 
Sbjct: 129 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 188

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNF 458
            H+ A+   ++G+S          F WG+   G+L   G+  KE    P  + AL   N 
Sbjct: 189 THSFAL--SLMGTS----------FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNV 236

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
             +SCG+  T  LT  G V+T G     QL   P++    P  +EG      V +I CG 
Sbjct: 237 VYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGS 294

Query: 518 YH-VAVLTSRTEVYTWGKG--ANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCG 568
           YH +A + +  +V + G+G        H +    +   L+ A  L D +VK I  G
Sbjct: 295 YHTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAG 350



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 13/221 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG  + +G LG G          K  SF+P  + S   + +  ++CG  H+  ++
Sbjct: 92  GRVFTWGAGS-EGQLGIG--------ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALS 142

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           + G+VFSWG    G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + 
Sbjct: 143 EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFG 202

Query: 309 WGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG +      L G+  +  ++ P  + G L+ ++V  +SCG  HT+V+T  GQ+FTFG  
Sbjct: 203 WGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGS 261

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           +   L H  R     P+ ++ + G    +  CG +HT A V
Sbjct: 262 SSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYV 301


>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Takifugu rubripes]
          Length = 726

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 174/361 (48%), Gaps = 43/361 (11%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           IACG  H AL+TK G +F +G    G+LG G    V+ P  + ALK   V LVACG +HT
Sbjct: 41  IACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNHT 100

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G +++ GG+  + G LG G+       ++++       V  ++ G   +A +T 
Sbjct: 101 LICTAQGKVFSSGGN--SEGQLGLGDCEERTTFQRIHAFDSLGPVKMLAAGSNTSAALTE 158

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           +G+LF +GD T G +G        +P+EVD    +  V  +CG +H+A V          
Sbjct: 159 SGKLFMWGDNTEGQIGLAKESHAPSPQEVDVGGPISWV--SCGYYHSAFVT--------- 207

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
              + G L+T+G+ D G+LG   ++     VP  V ++ EP   QV+CG   TVALT   
Sbjct: 208 ---ADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKEP-VTQVACGGGHTVALTEE- 262

Query: 476 HVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
            ++T G   +GQLG        +LP  VE    K  V ++ACG+ H AV+T    +YT+G
Sbjct: 263 RLFTFGLGQFGQLGHGTFIFESRLPRPVE-HFKKGRVCQVACGENHTAVITDGGLLYTFG 321

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCR 593
            G +G+LG G+ +  N                     F   +C      GV  + C GC 
Sbjct: 322 DGRHGKLGLGEENFTN--------------------QFKPTVCSRFLKYGVQAATCGGCH 361

Query: 594 I 594
           +
Sbjct: 362 M 362



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 155/311 (49%), Gaps = 35/311 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V  +ACG  H  + T QG+VFS G    G+LG G   + +  + I A  
Sbjct: 79  PTCVKALKTEKVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFD 138

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN--GPLEGI 340
           ++  V+++A G + + A+T SG ++ WG  +   G +G   E     P++++  GP    
Sbjct: 139 SLGPVKMLAAGSNTSAALTESGKLFMWG--DNTEGQIGLAKESHAPSPQEVDVGGP---- 192

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG----HGDRISVSTPREVDSLKGLRTVR 396
            +S VSCG +H+A VT+ G L+TFG+   G LG       R  V  P+ V S+K   T +
Sbjct: 193 -ISWVSCGYYHSAFVTADGALYTFGECDSGKLGLTTEQLPRHRV--PQMVKSIKEPVT-Q 248

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD--KEARLVPTCVAALV 454
            ACG  HT A+ E              +LFT+G G  G+LGHG    E+RL P  V    
Sbjct: 249 VACGGGHTVALTEE-------------RLFTFGLGQFGQLGHGTFIFESRL-PRPVEHFK 294

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN--GKLPTRVEGKLTKNFVEE 512
           +   CQV+CG + T  +T  G +YT G   +G+LG  + N   +    V  +  K  V+ 
Sbjct: 295 KGRVCQVACGENHTAVITDGGLLYTFGDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQA 354

Query: 513 IACGDYHVAVL 523
             CG  H+ VL
Sbjct: 355 ATCGGCHMVVL 365



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 147/299 (49%), Gaps = 25/299 (8%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           LKN     +ACG+ HT  +T +G ++ +G +  N+G LG G++ ++  P  +   L+   
Sbjct: 33  LKNDVPLKIACGDEHTALITKNGRLFMFGSN--NWGQLGLGSKRTVNKPTCVKA-LKTEK 89

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACG 400
           V  V+CG  HT + T+ G++F+ G  + G LG GD    +T + + +   L  V+  A G
Sbjct: 90  VLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGPVKMLAAG 149

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
              +AA+ E            SGKLF WGD   G++G   KE+   P+     V      
Sbjct: 150 SNTSAALTE------------SGKLFMWGDNTEGQIGLA-KESH-APSPQEVDVGGPISW 195

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGD 517
           VSCG+  +  +T  G +YT G    G+LG   +     ++P  V  K  K  V ++ACG 
Sbjct: 196 VSCGYYHSAFVTADGALYTFGECDSGKLGLTTEQLPRHRVPQMV--KSIKEPVTQVACGG 253

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            H   LT    ++T+G G  G+LGHG    +   P  VE  K  +V  + CG + TA I
Sbjct: 254 GHTVALTEE-RLFTFGLGQFGQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENHTAVI 311



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 97/193 (50%), Gaps = 24/193 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F+WG+ T   I            G+  +S  P   E  V   +  ++CG  H+A VT
Sbjct: 160 GKLFMWGDNTEGQI------------GLAKESHAPSPQEVDVGGPISWVSCGYYHSAFVT 207

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
             G ++++GE   G+LG   +    H  P+++ ++K   V  VACG  HT A+T    ++
Sbjct: 208 ADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKE-PVTQVACGGGHTVALT-EERLF 265

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI---HVSSVSCGPWHTAVVTSAGQLFTF 364
           T+G     FG LGHG   +     +L  P+E      V  V+CG  HTAV+T  G L+TF
Sbjct: 266 TFGLG--QFGQLGHG---TFIFESRLPRPVEHFKKGRVCQVACGENHTAVITDGGLLYTF 320

Query: 365 GDGTFGVLGHGDR 377
           GDG  G LG G+ 
Sbjct: 321 GDGRHGKLGLGEE 333



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 474 TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           TG V+T G   +           +P++    L  +   +IACGD H A++T    ++ +G
Sbjct: 12  TGAVFTFGKSKFAD--------NIPSKF--WLKNDVPLKIACGDEHTALITKNGRLFMFG 61

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
               G+LG G     N P+ V+ALK ++V  + CG + T  IC
Sbjct: 62  SNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNHT-LIC 103


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 170/366 (46%), Gaps = 28/366 (7%)

Query: 192 VFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +F WG  T  G LG GGI           + F P+ V      +++ IACG  +   VTK
Sbjct: 1   MFCWGS-TIHGELGLGGIEDE--------NIFTPREVNFEKANEIEQIACGDNYTIAVTK 51

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           +G+V+S G    G+LG   +      +LI  +  +     ACG  HT  V   G +++WG
Sbjct: 52  EGQVYSCGNNDHGQLGQ--EKGRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWG 109

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            SN   G LG     +     ++   L    +  ++CG  H+  +T+ G+L+ +G  + G
Sbjct: 110 -SNVE-GQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDG 167

Query: 371 VLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG G    +   P+ V SL  +     ACG +HT  +              SG +F WG
Sbjct: 168 QLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVI------------SKSGAVFAWG 215

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
               G+LG  D + R VP  +  L     C  +CG   +V LT  G V+T G+ +YGQLG
Sbjct: 216 RNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLG 275

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
                 ++  R   +L  + V +I+CG  H +A++ SR  VY WG G  G+LG+    + 
Sbjct: 276 HGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNS 335

Query: 549 NFPSLV 554
             P +V
Sbjct: 336 TTPQVV 341



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 156/328 (47%), Gaps = 25/328 (7%)

Query: 254 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +F WG  + G LG G   D ++  P+ ++  K   +E +ACG+++T AVT  G +Y+ G 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCG- 59

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
            N + G LG           +L   ++ +     +CG  HT VV   GQLF++G    G 
Sbjct: 60  -NNDHGQLGQEKGRK---RLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQ 115

Query: 372 LGHGDRIS--VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           LG  DR+S  +  PR V +L     V+ ACG+ H+ A+             ++G+L+ WG
Sbjct: 116 LGL-DRVSATIREPRMVKTLGTKIIVQIACGLKHSIALT------------NNGELYAWG 162

Query: 430 DGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
               G+LG G D +  L P  V +L       V+CG   T+ ++ +G V+  G   +GQL
Sbjct: 163 SNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQL 222

Query: 489 G-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G     N  +P ++   L  + V   ACG+     LT    V+T G G  G+LGHG+   
Sbjct: 223 GLSDIQNRNVPCQLR-TLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTS 281

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              P  +  L    V  I CG   T A+
Sbjct: 282 EILPRQIMELMGSTVTQISCGRRHTLAL 309



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 25/278 (8%)

Query: 306 MYTWGGS-NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           M+ WG + +   GL G  +E +++ P+++N   +   +  ++CG  +T  VT  GQ+++ 
Sbjct: 1   MFCWGSTIHGELGLGGIEDE-NIFTPREVNFE-KANEIEQIACGDNYTIAVTKEGQVYSC 58

Query: 365 GDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           G+   G LG    R  +     +D L   R  +AACG  HT  V E             G
Sbjct: 59  GNNDHGQLGQEKGRKRLQLISGIDPL-AFR--KAACGSSHTLVVNE------------WG 103

Query: 424 KLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +LF+WG    G+LG     A +  P  V  L      Q++CG   ++ALT  G +Y  GS
Sbjct: 104 QLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGS 163

Query: 483 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
              GQLG   D K   +L  ++   L    +  +ACG YH  V++    V+ WG+   G+
Sbjct: 164 NSDGQLGLGSDTKM--ELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQ 221

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           LG  D  +RN P  +  L++ +V    CG  F+  + +
Sbjct: 222 LGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTM 259


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 181/368 (49%), Gaps = 30/368 (8%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           ++ WG+ +   +  GGI              +P  +E      VQ IACG RH   +T  
Sbjct: 3   LYCWGDASHGQLGLGGIENE--------QILLPSQIEFKPDSPVQQIACGHRHTLFLTAN 54

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G+V++ G     +LGH + +    P  I  L+   V  +ACG  H+ A+T  G + +WG 
Sbjct: 55  GQVYACGNNDHHQLGHELPT--KRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGD 112

Query: 312 SNCNFGLLGHGNEMSLW-LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           ++C  G +GH  +  +  LPK L   L    V  ++CG  H+  +TS G+L+++G   +G
Sbjct: 113 NDC--GQVGHSTDNDVIELPKILRF-LVSRTVVQIACGNNHSLALTSCGELYSWGSNIYG 169

Query: 371 VLG---HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            LG     D    + P  + ++ G+     ACG            G+ S     S  +F 
Sbjct: 170 QLGVQSPKDLPHSNAPLRLTTILGIPLATIACG------------GNHSFLISKSSAVFG 217

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG    G+LG  D++ R  P+ + ++       V+CG   +V LT  G V+T G+  YGQ
Sbjct: 218 WGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQ 277

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG   +N ++  R+  +L  + + ++ACG+ H +A++ S   VY++G GA+G+LG  +T 
Sbjct: 278 LGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTI 337

Query: 547 DRNFPSLV 554
            +  P +V
Sbjct: 338 SQTLPKVV 345



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 40/273 (14%)

Query: 137 ESACGSVNS---------LSSGGSD-GRTGHLKGLSGD--------TFRVSLSSAVSSSS 178
           + ACGS +S         LS G +D G+ GH    S D          R  +S  V   +
Sbjct: 90  QIACGSRHSMALTEWGQILSWGDNDCGQVGH----STDNDVIELPKILRFLVSRTVVQIA 145

Query: 179 QGSGHDDG-DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQN 237
            G+ H     S G+++ WG     G LG    +   ++        P  + + + + +  
Sbjct: 146 CGNNHSLALTSCGELYSWGSNIY-GQLGVQSPKDLPHSNA------PLRLTTILGIPLAT 198

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           IACGG H+ L++K   VF WG+   G+LG   + + ++P  + +++ + V  V CG+ ++
Sbjct: 199 IACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYS 258

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHG---NEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-A 353
             +T  G ++T G    N+G LGHG   NEM   +P+ +   L G  ++ V+CG  HT A
Sbjct: 259 VFLTNEGGVFTCGAG--NYGQLGHGVSNNEM---IPRMV-IELMGSTITQVACGNRHTLA 312

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
           +V S G++++FG G  G LG  + IS + P+ V
Sbjct: 313 LVPSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 159/327 (48%), Gaps = 31/327 (9%)

Query: 221 SFVP--KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           SF+P   A + A    +  + CG  H   +T  G+V  +G  + G+LG G     S+P+ 
Sbjct: 30  SFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFGNGVKGQLGIGNTDSHSNPQR 89

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           +  L    V  +A G  H+ A+T SGD+Y +G +      LGH        P+K+  PL 
Sbjct: 90  VHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVP-PLG 148

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGH---GDRISVSTPREVDSLKGL 392
              ++ ++CG  HTAV+TS+G+LF FG   DG  GV GH   G  I  S P+ V  LKG 
Sbjct: 149 RAKITQLACGQDHTAVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGK 208

Query: 393 RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA 452
             V+  CG+ HT A+             ++G ++ WG+  RG+LG GD + R  P+ V  
Sbjct: 209 HVVQIGCGLQHTVALT------------AAGGVYCWGENGRGQLGTGDTQNRYTPSLVCK 256

Query: 453 LVEPNFC-QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLP-----TRVEGKLT 506
            +    C  V+CG   T+A+T    VY  GS  +GQLG  +    +P      R+ G+  
Sbjct: 257 PLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRRGVIVPVPTRIVRLGGRRV 316

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWG 533
           KN V     G +H  + T   E Y  G
Sbjct: 317 KNCVG----GAWHTIIGTVTGEQYIMG 339



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 127/280 (45%), Gaps = 25/280 (8%)

Query: 308 TWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVVTSAGQLFTFG 365
            W     + G LG+G    S +LP ++   L     ++ V CG  HT  +TS G +  FG
Sbjct: 10  VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFG 69

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           +G  G LG G+  S S P+ V  L G   V+ A G+ H+ A+ E            SG L
Sbjct: 70  NGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTE------------SGDL 117

Query: 426 FTWGDGDRGRLG--HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           + +GD   G+LG  H        P  V  L      Q++CG   T  LT++G ++  G+ 
Sbjct: 118 YAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNN 177

Query: 484 VYGQLG-------DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
             G LG        P      P  V G   K+ V+ I CG  H   LT+   VY WG+  
Sbjct: 178 RDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQ-IGCGLQHTVALTAAGGVYCWGENG 236

Query: 537 NGRLGHGDTDDRNFPSLV-EALKDKQVKSIVCGTSFTAAI 575
            G+LG GDT +R  PSLV + L   +   + CG   T A+
Sbjct: 237 RGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAV 276



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 161/355 (45%), Gaps = 34/355 (9%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA---CGEHHTCAVTLSGDMYTWG 310
           V++ G    G+LG+G  +  S      A +    + +A   CG  HT A+T  GD+  +G
Sbjct: 10  VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFG 69

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
             N   G LG GN  S   P++++  L G  V  ++ G  H+  +T +G L+ FGD   G
Sbjct: 70  --NGVKGQLGIGNTDSHSNPQRVH-LLSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSG 126

Query: 371 VLGHGDRISV--STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            LG G   +    TP++V  L   +  + ACG  HTA +             SSG+LF +
Sbjct: 127 QLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLT------------SSGELFMF 174

Query: 429 G---DGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           G   DG  G  GH ++   +V   P  V  L   +  Q+ CG   TVALT  G VY  G 
Sbjct: 175 GNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGE 234

Query: 483 PVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              GQLG      +  P+ V   L+      +ACG  H   +T   +VY +G   +G+LG
Sbjct: 235 NGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLG 294

Query: 542 HGDTD-DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIP 595
            G        P+ +  L  ++VK+ V G   T    +   V+G    M  GC +P
Sbjct: 295 LGRRGVIVPVPTRIVRLGGRRVKNCVGGAWHT----IIGTVTGEQYIM--GCILP 343


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 180/369 (48%), Gaps = 33/369 (8%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           +D  +P  +     + + ++ACG    A + + G+VF+ G    G+ G G  S V   +L
Sbjct: 30  VDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQCGIGSTSRVQSLRL 89

Query: 279 IDALKNINVELV--ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
           + AL   ++  +  A G  H  A++ SG +YT+G ++   G LGHG+   +  P K+   
Sbjct: 90  VPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNS--RGQLGHGSTNPITTPTKIK-D 146

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
           L   HV  V+C  +HT V+T  G L+ FG    G LG  D +    P  +        + 
Sbjct: 147 LASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLA 206

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG---DKEARLVPTCVAA- 452
            ACG  HT              + ++G +  +G  D G+LG G   D  A   P+ +AA 
Sbjct: 207 VACGQHHTVV------------SLTNGGVVAFGKNDHGQLGTGYTLDYHAS--PSLLAAP 252

Query: 453 ---LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKN 508
              LV P+   ++CG+  T+AL   G VY+ G   YGQLG   + +   PT ++  L K 
Sbjct: 253 LDSLVVPS---LACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKA-LAKT 308

Query: 509 FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
              ++ CG YH  VL+   +VY +G+  +G+LG G+  D   P ++ +L+DK V  +  G
Sbjct: 309 HAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFVVKVASG 368

Query: 569 TSFTAAICL 577
             F  +ICL
Sbjct: 369 --FYHSICL 375



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 145/329 (44%), Gaps = 27/329 (8%)

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN- 313
           +S+G+   G L H    D + P  I    N+ +  VACG   T  +  +GD++T G ++ 
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDS 73

Query: 314 --CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
             C  G       + L +P  +   +   H+ S + G  H   ++ +G L+TFG  + G 
Sbjct: 74  GQCGIGSTSRVQSLRL-VPALVTEDIA--HIRSAN-GCEHLTAISRSGALYTFGFNSRGQ 129

Query: 372 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           LGHG    ++TP ++  L     V  AC  +HT  +V  M           G L+ +G  
Sbjct: 130 LGHGSTNPITTPTKIKDLASYHVVEVACSYFHT--IVMTM----------EGTLYAFGRN 177

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-- 489
           D G+LG  D   R VP  +          V+CG   TV   T G V   G   +GQLG  
Sbjct: 178 DLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTG 237

Query: 490 ---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
              D  A+   P+ +   L    V  +ACG YH   L     VY++G+   G+LGHG   
Sbjct: 238 YTLDYHAS---PSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRH 294

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             + P+L++AL       + CG   T  +
Sbjct: 295 HLSEPTLIKALAKTHAVQVTCGCYHTLVL 323



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 146/305 (47%), Gaps = 19/305 (6%)

Query: 225 KAVESAVVLDVQNI--ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           + V + V  D+ +I  A G  H   +++ G ++++G    G+LGHG  + ++ P  I  L
Sbjct: 88  RLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHGSTNPITTPTKIKDL 147

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
            + +V  VAC   HT  +T+ G +Y +G ++   G LG  + M   +P  L        V
Sbjct: 148 ASYHVVEVACSYFHTIVMTMEGTLYAFGRND--LGQLGIDDGMDRHVPVPLT-YFNSRPV 204

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV-STPREVDS-LKGLRTVRAACG 400
            +V+CG  HT V  + G +  FG    G LG G  +   ++P  + + L  L     ACG
Sbjct: 205 LAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACG 264

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
            +HT A+ E             G ++++G  D G+LGHG +     PT + AL + +  Q
Sbjct: 265 YYHTIALAE------------HGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQ 312

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
           V+CG   T+ L+  G VY  G   +GQLG          ++   L   FV ++A G YH 
Sbjct: 313 VTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFVVKVASGFYHS 372

Query: 521 AVLTS 525
             LT+
Sbjct: 373 ICLTA 377



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 174/388 (44%), Gaps = 44/388 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDA 281
           P  ++      V  +AC   H  ++T +G ++++G    G+LG   G+D  V  P  +  
Sbjct: 141 PTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVP--LTY 198

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL-PKKLNGPLEGI 340
             +  V  VACG+HHT     +G +  +G ++   G LG G  +     P  L  PL+ +
Sbjct: 199 FNSRPVLAVACGQHHTVVSLTNGGVVAFGKND--HGQLGTGYTLDYHASPSLLAAPLDSL 256

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            V S++CG +HT  +   G +++FG   +G LGHG R  +S P  + +L     V+  CG
Sbjct: 257 VVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQVTCG 316

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
            +HT  + E             GK++ +G  + G+LG G+      P  +A+L +    +
Sbjct: 317 CYHTLVLSE------------DGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFVVK 364

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL---PTRVEGKLTKNFVEEIACGD 517
           V+ G   ++ LT T +  ++GS +       +  GKL   P R +     + V+  A   
Sbjct: 365 VASGFYHSICLTATKN--SVGSRMDTSHTLCQDLGKLVNNPMRSDLVFVLSGVQIHA--- 419

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS--------LVEALKDKQVKSIVCGT 569
            H  V+ +R E     K   GR+  G   + N P          +E L   +V SI   T
Sbjct: 420 -HSCVVMARCE--PLEKMLGGRMIEGSLSEINIPDYSPEVFQVFLEYLYTDEVASI--QT 474

Query: 570 SFTAAICLHKWVSGVDQS----MCSGCR 593
           +   A+ L + ++  DQ     +CS C 
Sbjct: 475 TEPDAVFLLELLALADQYLVQRLCSMCE 502


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 186/369 (50%), Gaps = 41/369 (11%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D  +P+ +    +  +  +ACGG H   +T  G+VF+WG    G+LGHG   +++ PKL+
Sbjct: 35  DELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLV 94

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
               +  +   A G  H+  V+ SG ++T G  N +FG LGHG+ +SL  P K++     
Sbjct: 95  SFFDDSVITQAAAGWSHSGFVSDSGCIFTCG--NGSFGQLGHGDTLSLSTPAKVS-HFNN 151

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH-GDRI-SVSTPREVDSLKGLRTVRA 397
             V  V+CG  H+ V+ +  Q+  FG G  G LG   DRI SV+ P  V  LK +  VR 
Sbjct: 152 DSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRI 211

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA-RLVPTCVAALVEP 456
           +    H+AA+             + G+ F+WG   RG  G  D  A + +P+ ++     
Sbjct: 212 SANGDHSAAI------------SADGQFFSWG---RGFCGGPDVHAPQSLPSPLS----- 251

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTK--NF----V 510
            F +V+ G +  + LT  G V+ +GS +  Q   P+         E    K  +F    V
Sbjct: 252 -FREVAVGWNHALLLTVDGEVFKLGSTLNKQ---PEKQQLQIDSSEALFEKVPDFDGVKV 307

Query: 511 EEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA----LKDKQVKSIV 566
            +IA G  H A +T   EV TWG G +G+LG G+T+D+  P LV      L+ K++K + 
Sbjct: 308 MQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIK-VY 366

Query: 567 CGTSFTAAI 575
           CG+ FT A+
Sbjct: 367 CGSGFTYAV 375



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 22/222 (9%)

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGSSSSS 418
           Q++++G GT G LG   ++      ++ SL  L ++   ACG  H  A+           
Sbjct: 16  QVWSWGAGTDGQLGT-TKLQDELLPQLLSLTSLPSISMLACGGAHVIALT---------- 64

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
             S GK+FTWG G  G+LGHGD     +P  V+   +    Q + G S +  ++ +G ++
Sbjct: 65  --SGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIF 122

Query: 479 TMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
           T G+  +GQLG     +   P +V      + V+ +ACG  H  VL +  +V  +G G  
Sbjct: 123 TCGNGSFGQLGHGDTLSLSTPAKVS-HFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKR 181

Query: 538 GRLGHGDTDDR----NFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G+LG   + DR    N P +V  LKD +V  I      +AAI
Sbjct: 182 GQLGF--SSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAI 221



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 6/185 (3%)

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           ++++WG G  G+LG    +  L+P  ++    P+   ++CG +  +ALT+ G V+T G  
Sbjct: 16  QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRG 75

Query: 484 VYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             GQLG     N  LP  V      + + + A G  H   ++    ++T G G+ G+LGH
Sbjct: 76  SSGQLGHGDILNITLPKLVS-FFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH 134

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKR 602
           GDT   + P+ V    +  VK + CG   +  +     V G      SG R    F   R
Sbjct: 135 GDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFG----SGKRGQLGFSSDR 190

Query: 603 HNCYN 607
               N
Sbjct: 191 IKSVN 195


>gi|340507220|gb|EGR33218.1| hypothetical protein IMG5_058940 [Ichthyophthirius multifiliis]
          Length = 660

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 177/380 (46%), Gaps = 59/380 (15%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDA 281
           PK +E    + ++ I+    H++ V+  G+++  G  L G+LG  +   ++++  +++ A
Sbjct: 87  PKNLEK---IYIKQISTSQNHSSCVSSNGDLYVCGSALHGKLGLENLTMANINKFQILTA 143

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN------G 335
           LK I V  VACG++HT A+T +  +Y WGG+                L KK+       G
Sbjct: 144 LKGIKVLQVACGDYHTLALTENDQVYAWGGT----------------LYKKVGQRGGKPG 187

Query: 336 PLEGIH---VSSVSCGPWHTAVVTSAGQLFTFGDG----TFGVLGHGDRISVSTPREVDS 388
           P+  +    V+ + CG +H+  +T+ G ++T+G G      G LG G    +  P ++  
Sbjct: 188 PIHQLTNKGVTYIDCGDFHSVAITNQGDIYTWGGGGQFQNKGQLGLGHMKDIEIPEQIQF 247

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
            K  + ++ +CG +HT A+++              +L+ WG G+ G LG G     L   
Sbjct: 248 FKNKKVIKVSCGQFHTMALID------------DNQLYGWGAGELGELGSGKVLYFLYLL 295

Query: 449 CVAALV-------------EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 495
            +  L              +P    + CG   T+ L   G+VY+ G   YGQLG    N 
Sbjct: 296 IILILKKYITINKNNYYKKDPQISDIKCGGHHTLILLNIGYVYSTGYGSYGQLGLKTTNN 355

Query: 496 KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
               ++   LTK  + +IA G  H  VLT   +V++ G  A G+LG GD + R   + + 
Sbjct: 356 HCEFQLVWTLTKKKIIKIAAGWNHSLVLTDTNDVFSCGYNAWGQLGLGDEESRTLFTHIS 415

Query: 556 ALKDKQVKSIVCGTSFTAAI 575
           AL  K V  I  G S + AI
Sbjct: 416 ALAGKNVVEISAGGSHSWAI 435



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 28/236 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGV--KMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           GD++ WG        GGG  ++    G+    D  +P+ ++      V  ++CG  H   
Sbjct: 214 GDIYTWG--------GGGQFQNKGQLGLGHMKDIEIPEQIQFFKNKKVIKVSCGQFHTMA 265

Query: 248 VTKQGEVFSWGEELGGRLGHG-------------VDSDVSHPKLIDALKNINVELVACGE 294
           +    +++ WG    G LG G             +   ++  K     K+  +  + CG 
Sbjct: 266 LIDDNQLYGWGAGELGELGSGKVLYFLYLLIILILKKYITINKNNYYKKDPQISDIKCGG 325

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           HHT  +   G +Y+ G GS    GL    N        +L   L    +  ++ G  H+ 
Sbjct: 326 HHTLILLNIGYVYSTGYGSYGQLGLKTTNNHCEF----QLVWTLTKKKIIKIAAGWNHSL 381

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           V+T    +F+ G   +G LG GD  S +    + +L G   V  + G  H+ A++E
Sbjct: 382 VLTDTNDVFSCGYNAWGQLGLGDEESRTLFTHISALAGKNVVEISAGGSHSWAILE 437


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 180/356 (50%), Gaps = 28/356 (7%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+ +E+   L +   A G RH+ L+     V+S G+   G+LG         P+ I AL 
Sbjct: 19  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 78

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
            ++++LV+CG+ H+ AV   G ++TWG GS    G +G   E+S ++P K+N  L GI +
Sbjct: 79  TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLG-IGESKEIS-FMPTKINS-LAGIKI 135

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGV 401
             VSCG +H+  ++  GQ+F++G    G LG G+ + S ++P++V SL+G+   + A G 
Sbjct: 136 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 195

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNF 458
            H+ A+   ++G+S          F WG+   G+L   G+  KE    P  + AL   N 
Sbjct: 196 THSFAL--SLMGTS----------FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNV 243

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
             +SCG+  T  LT  G V+T G     QL   P++    P  +EG      V +I CG 
Sbjct: 244 VYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGS 301

Query: 518 YH-VAVLTSRTEVYTWGKG--ANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCG 568
           YH +A + +  +V + G+G        H +    +   L+ A  L D +VK I  G
Sbjct: 302 YHTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAG 357



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 13/221 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG    +G LG G          K  SF+P  + S   + +  ++CG  H+  ++
Sbjct: 99  GRVFTWG-AGSEGQLGIG--------ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALS 149

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           + G+VFSWG    G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + 
Sbjct: 150 EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFG 209

Query: 309 WGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG +      L G+  +  ++ P  + G L+ ++V  +SCG  HT+V+T  GQ+FTFG  
Sbjct: 210 WGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGS 268

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           +   L H  R     P+ ++ + G    +  CG +HT A V
Sbjct: 269 SSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYV 308


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 179/397 (45%), Gaps = 35/397 (8%)

Query: 198 CTGDGILGGGIHRSGSYA--GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF 255
           C  DG LG G  R  + A   V   +F P+ + +    D+  ++CG RH   +T  G V+
Sbjct: 13  CNDDGQLGTGAKRRPTLAIDDVSASNF-PQQIGNLPDEDIVAVSCGSRHTMALTSSGAVY 71

Query: 256 SWGEELGGRLGHGVDSDVSHPKLIDALKN--INVELVACGEHHTCAVTLSGDMYTWGGSN 313
           SWG    G+LGHG    ++ P+ I   +   + V+ ++CG  H+ AVT  G +Y WG S+
Sbjct: 72  SWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYVWGESH 131

Query: 314 CNFGLLGHGNEMSLW---LPKKLNGPL--EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
             +G LG   E       LP K   P    G  +  VSCG  HTA +TS G+++ +G G 
Sbjct: 132 --WGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGD 189

Query: 369 FGVLGHGD----------RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            G LG G            +  S P  + +  G + V+ ACG +H+AAV E         
Sbjct: 190 SGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTE--------- 240

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
               G ++ WG  D G LG G    + +P  +    +    +VSCG   TV +  +G  Y
Sbjct: 241 ---QGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCY 297

Query: 479 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
             G   YG+LG      +    +   L    V + ACG  H   +TS    Y  G+  +G
Sbjct: 298 AFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHG 357

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           RLG  D      P+ ++ L    V+    G + + A+
Sbjct: 358 RLGLADMKALGVPTRLD-LGPIPVRQFSAGGAHSVAL 393



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 129/269 (47%), Gaps = 29/269 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +++WGE +  G LG       ++  + +   +P+      ++ V   +CGG H A +T
Sbjct: 122 GTLYVWGE-SHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKV---SCGGTHTAALT 177

Query: 250 KQGEVFSWGEELGGRLGHGV----DSD------VSHPKLIDALKNINVELVACGEHHTCA 299
             G V+ WG    G+LG G     D +       S P L+ A     V  VACG  H+ A
Sbjct: 178 SFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAA 237

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           VT  G +Y WG  +  +G+LG G      +PK+L    + I V  VSCG WHT VV  +G
Sbjct: 238 VTEQGHVYVWGKED--YGMLGVGQSSDQQIPKRLE-YFDDIPVLRVSCGGWHTVVVAKSG 294

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
             + FG G +G LG GD  S + P  V +LKG   ++AACG  HT  V            
Sbjct: 295 DCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVT----------- 343

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
            S G  +  G  D GRLG  D +A  VPT
Sbjct: 344 -SDGTAYVAGRPDHGRLGLADMKALGVPT 371



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 98/202 (48%), Gaps = 7/202 (3%)

Query: 188 SLGDVFIWGECTGD-GILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
           S G V++WG   GD G LG G +          M +  P  +++     V  +ACG  H+
Sbjct: 178 SFGRVYVWGR--GDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHS 235

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           A VT+QG V+ WG+E  G LG G  SD   PK ++   +I V  V+CG  HT  V  SGD
Sbjct: 236 AAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGD 295

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            Y +G     +G LG G+  S   P  +   L+G  V   +CG  HT  VTS G  +  G
Sbjct: 296 CYAFG--RGEYGRLGLGDTKSRTRPHLVKA-LKGKTVIQAACGGSHTLFVTSDGTAYVAG 352

Query: 366 DGTFGVLGHGDRISVSTPREVD 387
               G LG  D  ++  P  +D
Sbjct: 353 RPDHGRLGLADMKALGVPTRLD 374


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/292 (36%), Positives = 151/292 (51%), Gaps = 20/292 (6%)

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG----EHHTCAVTLSGDMYTWG 310
           FSWG    G LG G    V  P  I AL+ + V  VACG    E H+ AVT  G +YTWG
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                 G LGHG+  +L LP+ + G L+   +  V+CG  HT VV+ AG +F +G G FG
Sbjct: 61  SGKS--GQLGHGDSQNLVLPRLIVG-LQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFG 117

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LG G   + + P +V SL G++  + ACG  HTA V E            SG ++TWG 
Sbjct: 118 QLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTE------------SGHVYTWGW 165

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGSPVYGQLG 489
           G  G+LGHGD  ++  P  V  L       ++CG + TV ++     V++ G   YGQLG
Sbjct: 166 GVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLG 225

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
               +     +         +++IACG  +   L+SR +VY +G G +G+LG
Sbjct: 226 HGGWDIFGGNKNRSPRPIKDLQQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/261 (37%), Positives = 144/261 (55%), Gaps = 18/261 (6%)

Query: 233 LDVQNIACGG----RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           L V ++ACGG    +H+A VT+QG+V++WG    G+LGHG   ++  P+LI  L++  + 
Sbjct: 31  LLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIV 90

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            VACG  HT  V+ +G ++ WG  +  FG LG G+  +   P ++   L+G+ V  V+CG
Sbjct: 91  EVACGSAHTVVVSKAGLVFAWGWGH--FGQLGVGSTHNSNDPVQVT-SLDGVKVCKVACG 147

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             HTAVVT +G ++T+G G  G LGHGD  S S P  V  L G+     ACG+ HT  V 
Sbjct: 148 SAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVS 207

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
           EV              +F+WG  + G+LGHG  +        +     +  Q++CG S T
Sbjct: 208 EV-----------DRAVFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIKDLQQIACGSSYT 256

Query: 469 VALTTTGHVYTMGSPVYGQLG 489
           +AL++ G VY  G    GQLG
Sbjct: 257 LALSSRGDVYAFGWGKDGQLG 277



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 137/275 (49%), Gaps = 22/275 (8%)

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG----PWHTAVVTSAGQLF 362
           ++WG +N   G LG G   ++  P  +   L+G+ V SV+CG      H+A VT  GQ++
Sbjct: 1   FSWGFNN--DGALGLGTTDAVGSPCPII-ALQGLLVVSVACGGGSEEQHSAAVTEQGQVY 57

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           T+G G  G LGHGD  ++  PR +  L+    V  ACG  HT  V +            +
Sbjct: 58  TWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSK------------A 105

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           G +F WG G  G+LG G       P  V +L     C+V+CG + T  +T +GHVYT G 
Sbjct: 106 GLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGW 165

Query: 483 PVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE-VYTWGKGANGRL 540
            V GQLG    A+   P  V+ KL   +V  +ACG  H  V++     V++WG    G+L
Sbjct: 166 GVNGQLGHGDDASQSRPMYVK-KLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQL 224

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           GHG  D             K ++ I CG+S+T A+
Sbjct: 225 GHGGWDIFGGNKNRSPRPIKDLQQIACGSSYTLAL 259



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 15/202 (7%)

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG----HSLTVALTTTGHVYTMG 481
           F+WG  + G LG G  +A   P  + AL       V+CG       + A+T  G VYT G
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 482 SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
           S   GQLG   +   +  R+   L  N + E+ACG  H  V++    V+ WG G  G+LG
Sbjct: 61  SGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLG 120

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSGCRIPFN 597
            G T + N P  V +L   +V  + CG++ TA +     ++ W  GV+  +  G     +
Sbjct: 121 VGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQS 180

Query: 598 ---FKRKRHNCY----NCGLVY 612
              + +K H  Y     CGL +
Sbjct: 181 RPMYVKKLHGIYVSTLACGLAH 202


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 161/326 (49%), Gaps = 22/326 (6%)

Query: 254 VFSWGEELGGRLGH-GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           +++WG     RLG  G   D   P+LI   +N  ++ VACG  HT  +   G ++++G +
Sbjct: 12  LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYN 71

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
              +G LG+G ++   L    +       + +V+CG +H+A +   G +FT+G G  G L
Sbjct: 72  Q--YGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRL 129

Query: 373 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           GH D  + + P  +  L   R  +  CG   TAA+ +               L+TWG G+
Sbjct: 130 GHNDEQTRTIPCRITHLP--RAHKIFCGYHITAAITD-------------DGLYTWGWGE 174

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFC--QVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
            G+LG G  E    P  V    + N    Q++CG    +  T +G VYT GS  +GQLG 
Sbjct: 175 HGQLGQGSLEDSYGPKKVI-FDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGI 233

Query: 491 PKANGKLPTRVE-GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
            + N    + V    L    V  +A GD H A +T+   ++TWG GA G+ GHGD +D +
Sbjct: 234 GRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCD 293

Query: 550 FPSLVEALKDKQVKSIVCGTSFTAAI 575
            P LVE+L    +  + CG +FT A+
Sbjct: 294 MPFLVESLVGVFILKVFCGHNFTVAL 319



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 157/316 (49%), Gaps = 22/316 (6%)

Query: 216 GVKMDSFVPKAVE-SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
           G K+DS +  + + S++   +  +ACG  H+A +   G VF+WG    GRLGH  +   +
Sbjct: 79  GTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRT 138

Query: 275 HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
            P  I  L       + CG H T A+T  G +YTWG      G LG G+    + PKK+ 
Sbjct: 139 IPCRITHLPR--AHKIFCGYHITAAITDDG-LYTWGWGE--HGQLGQGSLEDSYGPKKVI 193

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV-STPREVDSLKGLR 393
                + +S ++CG  H  V T +G ++T+G   FG LG G    + S+P  + SL G+ 
Sbjct: 194 FDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMM 253

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
               A G  H+AAV             ++G LFTWG G  G+ GHGD     +P  V +L
Sbjct: 254 VTFVAAGDRHSAAVT------------NTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESL 301

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEE 512
           V     +V CGH+ TVAL+    +Y  G+  YGQLGD  K++   P ++   +      +
Sbjct: 302 VGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTI--D 359

Query: 513 IACGDYHVAVLTSRTE 528
           I CG +H  + T+  E
Sbjct: 360 ITCGHFHCTLWTTLEE 375



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 76/165 (46%), Gaps = 7/165 (4%)

Query: 421 SSGKLFTWGDGDRGRLG-HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
           +S  L+TWG     RLG  G ++    P  +         QV+CG   T+ L   G +++
Sbjct: 8   ASSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHS 67

Query: 480 MGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
            G   YGQLG+  K +  L    +     N +  +ACG YH A L     V+TWG G NG
Sbjct: 68  FGYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNG 127

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC---LHKW 580
           RLGH D   R  P  +  L   +   I CG   TAAI    L+ W
Sbjct: 128 RLGHNDEQTRTIPCRITHL--PRAHKIFCGYHITAAITDDGLYTW 170


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 170/342 (49%), Gaps = 28/342 (8%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G  H+ L+   G V S G+   G+LG         P+ I AL+ +NV LV+CG+ H+ 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88

Query: 299 AVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG ++   G LG G  + + ++PKK+   L GI +  V+CG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAASE--GQLGIGEFKETTFIPKKIK-TLAGIKIIQVACGHYHSVALSE 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            GQ+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                SG  F WG    G+L   G+     R  P  + AL       +SCG+  T  LT 
Sbjct: 197 ---SLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253

Query: 474 TGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYT 531
            G V+T G   YGQLG DP A  + P  VE    +  V +I CG D+ +A + +  +V +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVS 311

Query: 532 WGK--GANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGT 569
           +G+  G   R  H   +  +   LV A  L D QVK I  GT
Sbjct: 312 FGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGT 353



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 143/278 (51%), Gaps = 28/278 (10%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKGL------SGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V+L S     S    H      G V
Sbjct: 46  SCGD----NSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHK-----GRV 96

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG  + +G LG G          K  +F+PK +++   + +  +ACG  H+  +++ G
Sbjct: 97  FAWGAAS-EGQLGIG--------EFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDG 147

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG    G+LG G +    + P+ + +L+ I +  VA G HH+ A++LSG  + WG 
Sbjct: 148 QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGS 207

Query: 312 SNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           ++     L G+   +  + P  + G L+ + V S+SCG  HTAV+T  G++FTFGD ++G
Sbjct: 208 NSAGQLALSGNNAPVQRYKPVSI-GALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYG 266

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            LGH        P+ V+ ++GL + +  CG  HT A +
Sbjct: 267 QLGHDPTAEKRGPQLVERIEGLVS-QIDCGSDHTLAYI 303



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 23/236 (9%)

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  H+ ++ S G + + GD + G LG         P  + +L+ L     +CG  H+ AV
Sbjct: 31  GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHS 466
                       C  G++F WG    G+LG G+ KE   +P  +  L      QV+CGH 
Sbjct: 91  ------------CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHY 138

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAV 522
            +VAL+  G V++ G+  +GQLG  K   + P++   +  ++     + ++A G +H   
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQVAAGGHHSFA 195

Query: 523 LTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           L+     + WG  + G+L   G+     R  P  + ALK   V SI CG   TA +
Sbjct: 196 LSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 11/144 (7%)

Query: 174 VSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
           ++  + G  H    SL G  F WG  +      G +  SG+ A V+   + P ++ +   
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNSA-----GQLALSGNNAPVQ--RYKPVSIGALKT 235

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L V +I+CG +H A++T+ G+VF++G+   G+LGH   ++   P+L++ ++ + V  + C
Sbjct: 236 LGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQIDC 294

Query: 293 GEHHTCA-VTLSGDMYTWG-GSNC 314
           G  HT A +  +G + ++G G  C
Sbjct: 295 GSDHTLAYIYTTGQVVSFGRGPGC 318


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 170/342 (49%), Gaps = 28/342 (8%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G  H+ L+   G V S G+   G+LG         P+ I AL+ +NV LV+CG+ H+ 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88

Query: 299 AVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG ++   G LG G  + + ++PKK+   L GI +  V+CG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAASE--GQLGIGEFKETTFIPKKIK-TLAGIKIIQVACGHYHSVALSE 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            GQ+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                SG  F WG    G+L   G+     R  P  + AL       +SCG+  T  LT 
Sbjct: 197 ---SLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253

Query: 474 TGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYT 531
            G V+T G   YGQLG DP A  + P  VE    +  V +I CG D+ +A + +  +V +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVS 311

Query: 532 WGK--GANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGT 569
           +G+  G   R  H   +  +   LV A  L D QVK I  GT
Sbjct: 312 FGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGT 353



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 143/278 (51%), Gaps = 28/278 (10%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKGL------SGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V+L S     S    H      G V
Sbjct: 46  SCGD----NSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHK-----GRV 96

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG  + +G LG G          K  +F+PK +++   + +  +ACG  H+  +++ G
Sbjct: 97  FAWGAAS-EGQLGIG--------EFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDG 147

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG    G+LG G +    + P+ + +L+ I +  VA G HH+ A++LSG  + WG 
Sbjct: 148 QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGS 207

Query: 312 SNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           ++     L G+   +  + P  + G L+ + V S+SCG  HTAV+T  G++FTFGD ++G
Sbjct: 208 NSAGQLALSGNNAPVQRYKPVSI-GALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYG 266

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            LGH        P+ V+ ++GL + +  CG  HT A +
Sbjct: 267 QLGHDPTAEKRGPQLVERIEGLVS-QIDCGSDHTLAYI 303



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 23/236 (9%)

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  H+ ++ S G + + GD + G LG         P  + +L+ L     +CG  H+ AV
Sbjct: 31  GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHS 466
                       C  G++F WG    G+LG G+ KE   +P  +  L      QV+CGH 
Sbjct: 91  ------------CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHY 138

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAV 522
            +VAL+  G V++ G+  +GQLG  K   + P++   +  ++     + ++A G +H   
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQVAAGGHHSFA 195

Query: 523 LTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           L+     + WG  + G+L   G+     R  P  + ALK   V SI CG   TA +
Sbjct: 196 LSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 11/144 (7%)

Query: 174 VSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
           ++  + G  H    SL G  F WG  +      G +  SG+ A V+   + P ++ +   
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNSA-----GQLALSGNNAPVQ--RYKPVSIGALKT 235

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L V +I+CG +H A++T+ G+VF++G+   G+LGH   ++   P+L++ ++ + V  + C
Sbjct: 236 LGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQIDC 294

Query: 293 GEHHTCA-VTLSGDMYTWG-GSNC 314
           G  HT A +  +G + ++G G  C
Sbjct: 295 GSDHTLAYIYTTGQVVSFGRGPGC 318


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 174/348 (50%), Gaps = 45/348 (12%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG-GRLGHG---VDSDVSHPKLI 279
           P++V S    DV ++A G RH+  VT  GEV+++G+  G G+       +   V  P  +
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEV 258

Query: 280 DALKNI--NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH---------GNEMSL- 327
            A  N    V  VACG+ H  AVT SG + +WG  N  FG LG          G+  SL 
Sbjct: 259 TATTNAMPRVATVACGQRHCAAVTTSGVLLSWG--NEEFGQLGQGPPRDSSSKGDAKSLI 316

Query: 328 -------WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV 380
                   +P+ +      +  +SV+CG  HT  +T+ G++F+FG G FG LGHGDR++ 
Sbjct: 317 RRRADASMMPRLVGS--GHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNC 374

Query: 381 STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD 440
             PR VD+L G+   + A G  H+A++             +SG+++TWG G  G LGH D
Sbjct: 375 DVPRLVDALWGVGVAQIAAGDNHSASL------------SASGRVYTWGRGKYGALGHRD 422

Query: 441 KEARLVPTCVAALVEPNF-C-QVSCG--HSLTVALTTTGHVYTMGSPVYGQLGD-PKANG 495
            + R  PT V AL +    C Q++CG  H+L +A   +G +   G    G  G    A+ 
Sbjct: 423 VDNRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADV 482

Query: 496 KLPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             PT ++  L  +  V +I+ G  H   +T    VYTWG    G+LGH
Sbjct: 483 LTPTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTWGARTQGQLGH 530



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 161/327 (49%), Gaps = 47/327 (14%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD----VQNIACGGR 243
           S G+V+ +G+C+G+G            A  ++   V    E     +    V  +ACG R
Sbjct: 225 SAGEVYAFGDCSGEG--------KALSAPTRLREAVIDPPEVTATTNAMPRVATVACGQR 276

Query: 244 HAALVTKQGEVFSWGEELGGRLGHGVDSDVS-----------------HPKLIDALKNIN 286
           H A VT  G + SWG E  G+LG G   D S                  P+L+ +  ++ 
Sbjct: 277 HCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGS-GHVK 335

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
              VACG  HT A+T +G ++++G     FG LGHG+ ++  +P+ ++  L G+ V+ ++
Sbjct: 336 FTSVACGAGHTLALTANGRVFSFG--RGAFGALGHGDRLNCDVPRLVDA-LWGVGVAQIA 392

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK--GLRTVRAACGVWHT 404
            G  H+A ++++G+++T+G G +G LGH D  + S P  V +L   G+R  + ACG  HT
Sbjct: 393 AGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHT 452

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV--AALVEPNFCQVS 462
            A+          +   SG L  WG G  G  G G     L PT +  A L +    Q+S
Sbjct: 453 LAI----------AGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQIS 502

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLG 489
            G   +VA+T  G VYT G+   GQLG
Sbjct: 503 AGSKHSVAVTEGGCVYTWGARTQGQLG 529



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 128/270 (47%), Gaps = 48/270 (17%)

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST--------PREVDS 388
           L+G  V+ V+ G  H+  VTSAG+++ FGD +    G G  +S  T        P EV +
Sbjct: 205 LDGRDVTHVAGGARHSVAVTSAGEVYAFGDCS----GEGKALSAPTRLREAVIDPPEVTA 260

Query: 389 LKGL--RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD------ 440
                 R    ACG  H AAV             +SG L +WG+ + G+LG G       
Sbjct: 261 TTNAMPRVATVACGQRHCAAVT------------TSGVLLSWGNEEFGQLGQGPPRDSSS 308

Query: 441 -----------KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
                       +A ++P  V +     F  V+CG   T+ALT  G V++ G   +G LG
Sbjct: 309 KGDAKSLIRRRADASMMPRLVGS-GHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALG 367

Query: 490 D-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
              + N  +P  V+  L    V +IA GD H A L++   VYTWG+G  G LGH D D+R
Sbjct: 368 HGDRLNCDVPRLVDA-LWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNR 426

Query: 549 NFPSLVEALKDKQVK--SIVCGTSFTAAIC 576
           + P+ V+AL D  V+   I CG   T AI 
Sbjct: 427 SRPTPVQALDDAGVRCEQIACGGDHTLAIA 456



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 20/223 (8%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
           S +P+ V S  V    ++ACG  H   +T  G VFS+G    G LGHG   +   P+L+D
Sbjct: 323 SMMPRLVGSGHV-KFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVD 381

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE-G 339
           AL  + V  +A G++H+ +++ SG +YTWG     +G LGH +  +   P  +    + G
Sbjct: 382 ALWGVGVAQIAAGDNHSASLSASGRVYTWG--RGKYGALGHRDVDNRSRPTPVQALDDAG 439

Query: 340 IHVSSVSCGPWHTAVVTSAGQ--LFTFGDGTFGVLGHGDRISVSTPREVDS--LKGLRTV 395
           +    ++CG  HT  +   G   L  +G G+ G  G G    V TP  +D   L   +  
Sbjct: 440 VRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVF 499

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH 438
           + + G  H+ AV E             G ++TWG   +G+LGH
Sbjct: 500 QISAGSKHSVAVTE------------GGCVYTWGARTQGQLGH 530


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 170/342 (49%), Gaps = 28/342 (8%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G  H+ L+   G V S G+   G+LG         P+ I AL+ +NV LV+CG+ H+ 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88

Query: 299 AVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG ++   G LG G  + + ++PKK+   L GI +  V+CG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAASE--GQLGIGEFKETTFIPKKIK-TLAGIKIIQVACGHYHSVALSE 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            GQ+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                SG  F WG    G+L   G+     R  P  + AL       +SCG+  T  LT 
Sbjct: 197 ---SLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253

Query: 474 TGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYT 531
            G V+T G   YGQLG DP A  + P  VE    +  V +I CG D+ +A + +  +V +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVS 311

Query: 532 WGK--GANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGT 569
           +G+  G   R  H   +  +   LV A  L D QVK I  GT
Sbjct: 312 FGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGT 353



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 143/278 (51%), Gaps = 28/278 (10%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKGL------SGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V+L S     S    H      G V
Sbjct: 46  SCGD----NSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHK-----GRV 96

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG  + +G LG G          K  +F+PK +++   + +  +ACG  H+  +++ G
Sbjct: 97  FAWGAAS-EGQLGIG--------EFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDG 147

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG    G+LG G +    + P+ + +L+ I +  VA G HH+ A++LSG  + WG 
Sbjct: 148 QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGS 207

Query: 312 SNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           ++     L G+   +  + P  + G L+ + V S+SCG  HTAV+T  G++FTFGD ++G
Sbjct: 208 NSAGQLALSGNNAPVQRYKPVSI-GALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYG 266

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            LGH        P+ V+ ++GL + +  CG  HT A +
Sbjct: 267 QLGHDPTAEKRGPQLVERIEGLVS-QIDCGSDHTLAYI 303



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 23/236 (9%)

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  H+ ++ S G + + GD + G LG         P  + +L+ L     +CG  H+ AV
Sbjct: 31  GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHS 466
                       C  G++F WG    G+LG G+ KE   +P  +  L      QV+CGH 
Sbjct: 91  ------------CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHY 138

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAV 522
            +VAL+  G V++ G+  +GQLG  K   + P++   +  ++     + ++A G +H   
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQVAAGGHHSFA 195

Query: 523 LTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           L+     + WG  + G+L   G+     R  P  + ALK   V SI CG   TA +
Sbjct: 196 LSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 11/144 (7%)

Query: 174 VSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
           ++  + G  H    SL G  F WG  +      G +  SG+ A V+   + P ++ +   
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNSA-----GQLALSGNNAPVQ--RYKPVSIGALKT 235

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L V +I+CG +H A++T+ G+VF++G+   G+LGH   ++   P+L++ ++ + V  + C
Sbjct: 236 LGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQIDC 294

Query: 293 GEHHTCA-VTLSGDMYTWG-GSNC 314
           G  HT A +  +G + ++G G  C
Sbjct: 295 GSDHTLAYIYTTGQVVSFGRGPGC 318


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 172/343 (50%), Gaps = 29/343 (8%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           +++WG    G+ G G D + + P+ + AL+  +V   A G +++  VT  G++YT  GSN
Sbjct: 39  LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYT-TGSN 97

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
               L   G E++L  P +++  LE  +V  V+CG  H   V   G L  +G   +G LG
Sbjct: 98  DARQLGVKGREVAL-EPIRVSA-LEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLG 155

Query: 374 HGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G+   S + PR +  ++G    R A G  H+ A+             SSG+++++G+G 
Sbjct: 156 TGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALT------------SSGQVYSFGEGS 203

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G LGHGD   R  PT V AL       ++ G   + A++ +G V+T G   YGQLG+ +
Sbjct: 204 FGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGE 263

Query: 493 -ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF- 550
             N  LP  V G   +  V ++ACGD+H   LT   EVYTWG  ++G+LG G        
Sbjct: 264 FGNAFLPQPVPG--IEQAV-QVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEAL 320

Query: 551 ------PSLVEALKDKQVKSIVCGT--SFTAAICLHKWVSGVD 585
                 PS V++L D+ ++ +  G   SF  +     W +G +
Sbjct: 321 NGCLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGAN 363



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 177/371 (47%), Gaps = 29/371 (7%)

Query: 215 AGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
           +G   +S  P+ V++    DV + A G  ++A VT+ GE+++ G     +LG        
Sbjct: 52  SGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREVAL 111

Query: 275 HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
            P  + AL+  NV  VACG+ H  AV  +G +  WG +   +G LG G   +     ++ 
Sbjct: 112 EPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSN--EYGQLGTGEVGASAAQPRVL 169

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
             + G H + V+ G  H+  +TS+GQ+++FG+G+FG LGHGD  + + P  V +L     
Sbjct: 170 KRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLVQALWPEAI 229

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
           V  A G + +AAV              SG++FTWG    G+LG+G+     +P  V  + 
Sbjct: 230 VSIAAGEYFSAAV------------SLSGRVFTWGRNKYGQLGNGEFGNAFLPQPVPGIE 277

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD------PKANGKL--PTRVEGKLT 506
           +    QV+CG    +ALT  G VYT G    GQLG          NG L  P+RV+  L 
Sbjct: 278 QA--VQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVD-SLA 334

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWGKGAN--GRLGHGDTDDRNFPSLVEALKDKQVKS 564
              + +++ G  H   ++   ++  WG GAN  G+L          P+ V  L    ++ 
Sbjct: 335 DQSIRQVSAGARHSFFVSPGEQL--WGAGANDEGQLALQSVPSVALPTRVPGLPGLPMRF 392

Query: 565 IVCGTSFTAAI 575
            V     + A+
Sbjct: 393 AVAAGDHSIAV 403



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 30/249 (12%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           +A G  H+  +T  G+V+S+GE   G LGHG  ++ + P L+ AL    +  +A GE+ +
Sbjct: 180 VAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFS 239

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            AV+LSG ++TWG     +G LG+G   + +LP+ + G  + +    V+CG  H   +T 
Sbjct: 240 AAVSLSGRVFTWG--RNKYGQLGNGEFGNAFLPQPVPGIEQAVQ---VACGDHHCIALTR 294

Query: 358 AGQLFTFGDGTFGVLGHGDRIS-------VSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            G+++T+G  + G LG G  +        + +P  VDSL                ++ +V
Sbjct: 295 WGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDSLA-------------DQSIRQV 341

Query: 411 MVGSSSSSNCSSGKLFTWGDG--DRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHS 466
             G+  S   S G+   WG G  D G+L      +  +PT V  L  +   F   +  HS
Sbjct: 342 SAGARHSFFVSPGEQL-WGAGANDEGQLALQSVPSVALPTRVPGLPGLPMRFAVAAGDHS 400

Query: 467 LTVALTTTG 475
           + V   ++G
Sbjct: 401 IAVLDESSG 409


>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
 gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
           SB210]
          Length = 1146

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 205/458 (44%), Gaps = 69/458 (15%)

Query: 147 SSGGSDGRTGHLK---GLSGDTFRVSLSSAVSSSSQGSGHDDGDSLG-DVFIWGECTGDG 202
           S G    +  HLK    LS +      SS V+  ++G G    +S+   +F WG+    G
Sbjct: 500 SQGDDKLKQSHLKDERNLSPNNISSMKSSNVNVQNEGQG----NSIKCYIFAWGK-NESG 554

Query: 203 ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG 262
            L  G  +   Y         P+  ++   + ++ I+    H+A ++  GE++  G  L 
Sbjct: 555 ELSFGNQKQPFYNK-------PENPKNLDRIYIKQISTSQNHSACISANGELYVCGSALH 607

Query: 263 GRLG--HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 320
           G+LG      ++++  ++I   K I V  VACG++HT A+T +  +Y+WGG+        
Sbjct: 608 GKLGLEELTMANINKFQMIPIFKGIKVLQVACGDYHTLALTDTDQVYSWGGT-------- 659

Query: 321 HGNEMSLWLPKKLN------GPLEGIH---VSSVSCGPWHTAVVTSAGQLFTFG----DG 367
                   L KK+        P++ ++   V  V CG +H+A +T  G ++T+G    D 
Sbjct: 660 --------LHKKVGQRSGKPAPIQQLNKKGVIQVDCGDYHSAAITQNGDIYTWGGGGQDY 711

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G LG G    +  P ++   +G + V+ +CG +HT A+             S  +LF 
Sbjct: 712 NKGQLGLGHVKDIENPEKLKFFEGKKIVKVSCGQFHTMALT------------SENELFG 759

Query: 428 WGDGDRGRLGHGDKEARLVPTCVA----------ALVEPNFCQVSCGHSLTVALTTTGHV 477
           WG G+ G LG    E   +   V            L E +   + CG   T+ LT  G++
Sbjct: 760 WGAGEFGELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLLLTNNGYI 819

Query: 478 YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
           Y+ G    GQLG   +  +   ++   LTK  + +IA G  H   L+ + +++  G GA 
Sbjct: 820 YSSGYGRQGQLGLRNSENQCEFQLVWTLTKKKIIKIAAGWNHSLALSDQNDIFACGHGAR 879

Query: 538 GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G+LG GD + R   + V +L  K   +I  G   + A+
Sbjct: 880 GQLGLGDEESRTIFTHVVSLGGKNTATISAGGDHSWAV 917



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 97/234 (41%), Gaps = 27/234 (11%)

Query: 190 GDVFIWG---ECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           GD++ WG   +    G LG G H        K+  F  K +          ++CG  H  
Sbjct: 699 GDIYTWGGGGQDYNKGQLGLG-HVKDIENPEKLKFFEGKKIVK--------VSCGQFHTM 749

Query: 247 LVTKQGEVFSWGEELGGRLGHG------VDSDVSHPKLIDALKNI----NVELVACGEHH 296
            +T + E+F WG    G LG        +   V+  +     +NI    +++ + CG HH
Sbjct: 750 ALTSENELFGWGAGEFGELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHH 809

Query: 297 TCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           T  +T +G +Y+ G G     GL    N+       +L   L    +  ++ G  H+  +
Sbjct: 810 TLLLTNNGYIYSSGYGRQGQLGLRNSENQCEF----QLVWTLTKKKIIKIAAGWNHSLAL 865

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           +    +F  G G  G LG GD  S +    V SL G  T   + G  H+ AV++
Sbjct: 866 SDQNDIFACGHGARGQLGLGDEESRTIFTHVVSLGGKNTATISAGGDHSWAVLD 919


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/353 (35%), Positives = 168/353 (47%), Gaps = 24/353 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P AV S +   V  IA GG H   +   G V+ WG    G+LG G D+D S P  +  L 
Sbjct: 403 PAAV-SGLPSGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLA 461

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           +  VE +A G  HTCA+T SG ++ WG    N G LG G+ +    P  ++G   G  V+
Sbjct: 462 S-GVETIAAGGWHTCALTSSGGVWCWG--RNNSGQLGDGSTIYHITPVAVSGLPSG--VT 516

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
           +++ G +HT  +T +G ++ +G    G LG G     STP  V  L    TV AA G +H
Sbjct: 517 AIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTVIAA-GRFH 575

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           T A+             SSG ++ WG    G+LG G    R  P  V+ L       ++ 
Sbjct: 576 TCALT------------SSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGL-PSGVTAIAA 622

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
           G   T ALT++G V+  G   YGQLGD    N   P  V G    + V  IA G  H   
Sbjct: 623 GGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGL--PSGVTAIAAGWEHTCA 680

Query: 523 LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LTS  EV+ WG    G+LG G T +R+ P  V  L    V +I  G   T A+
Sbjct: 681 LTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG-VTAIAAGVYHTCAL 732



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 164/339 (48%), Gaps = 23/339 (6%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           IA GG H   +   G V+ WG    G+LG G D+D S P  +  L +  V  +A G++HT
Sbjct: 263 IAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPS-GVTAIAAGDYHT 321

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           CA+T SG+++ WGG+   FG LG G   +   P  ++G   G+   +++ G +HT  + S
Sbjct: 322 CALTGSGEVWCWGGNG--FGQLGDGTTTARSTPAAVSGLPSGVE--TIAAGDYHTCALMS 377

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           +G ++ +G    G LG G   + STP  V  L    T  AA G+ HT A++         
Sbjct: 378 SGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSGVTAIAAGGL-HTCALM--------- 427

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
              SSG ++ WG  + G+LG G       P  V+ L       ++ G   T ALT++G V
Sbjct: 428 ---SSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLAS-GVETIAAGGWHTCALTSSGGV 483

Query: 478 YTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           +  G    GQLGD      + P  V G    + V  IA GDYH   LT    V+ WG   
Sbjct: 484 WCWGRNNSGQLGDGSTIYHITPVAVSGL--PSGVTAIAAGDYHTCALTGSGGVWCWGYNL 541

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +G+LG G T DR+ P  V  L    V  I  G   T A+
Sbjct: 542 SGQLGDGTTTDRSTPVAVSGLTSG-VTVIAAGRFHTCAL 579



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 122/350 (34%), Positives = 165/350 (47%), Gaps = 30/350 (8%)

Query: 207 GIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 265
           G++ SG    G   DS  P AV S +   V+ IA GG H   +T  G V+ WG    G+L
Sbjct: 436 GLNNSGQLGDGSDTDSSTPVAV-SGLASGVETIAAGGWHTCALTSSGGVWCWGRNNSGQL 494

Query: 266 GHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF-GLLGHG 322
           G G  S + H  P  +  L +  V  +A G++HTCA+T SG ++ WG    N  G LG G
Sbjct: 495 GDG--STIYHITPVAVSGLPS-GVTAIAAGDYHTCALTGSGGVWCWG---YNLSGQLGDG 548

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
                  P  ++G   G+ V  ++ G +HT  +TS+G ++ +G    G LG G   + +T
Sbjct: 549 TTTDRSTPVAVSGLTSGVTV--IAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTT 606

Query: 383 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE 442
           P  V  L    T  AA G WHT A+             SSG+++ WGD   G+LG G   
Sbjct: 607 PVAVSGLPSGVTAIAA-GGWHTCALT------------SSGEVWCWGDNYYGQLGDGTTT 653

Query: 443 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRV 501
            R  P  V+ L       ++ G   T ALT++G V+  G   YGQLGD    N   P  V
Sbjct: 654 NRSTPGAVSGL-PSGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAV 712

Query: 502 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            G    + V  IA G YH   LT    V  WG   +G+LG G    R  P
Sbjct: 713 SGL--PSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTP 760



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 177/387 (45%), Gaps = 34/387 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+V+ WG   G G LG G   + S          P AV S +   V+ IA G  H   + 
Sbjct: 328 GEVWCWGG-NGFGQLGDGTTTARS---------TPAAV-SGLPSGVETIAAGDYHTCALM 376

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G V+ WG    G+LG G  +  S P  +  L +  V  +A G  HTCA+  SG ++ W
Sbjct: 377 SSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPS-GVTAIAAGGLHTCALMSSGGVWCW 435

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G +  N G LG G++     P  ++G   G+   +++ G WHT  +TS+G ++ +G    
Sbjct: 436 GLN--NSGQLGDGSDTDSSTPVAVSGLASGVE--TIAAGGWHTCALTSSGGVWCWGRNNS 491

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LG G  I   TP  V  L    T  AA G +HT A+              SG ++ WG
Sbjct: 492 GQLGDGSTIYHITPVAVSGLPSGVTAIAA-GDYHTCALT------------GSGGVWCWG 538

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
               G+LG G    R  P  V+ L       ++ G   T ALT++G V+  G+   GQLG
Sbjct: 539 YNLSGQLGDGTTTDRSTPVAVSGLTS-GVTVIAAGRFHTCALTSSGGVWCWGANFDGQLG 597

Query: 490 D-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
           D    N   P  V G    + V  IA G +H   LTS  EV+ WG    G+LG G T +R
Sbjct: 598 DGTTTNRTTPVAVSGL--PSGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNR 655

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
           + P  V  L    V +I  G   T A+
Sbjct: 656 STPGAVSGLPSG-VTAIAAGWEHTCAL 681



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 167/354 (47%), Gaps = 25/354 (7%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P AV S +   V  IA G  H   +T  G V  WG    G+LG+G+    S P  +  L 
Sbjct: 96  PGAV-SGLPSGVTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLP 154

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           +  V  +A G  HTCA+  SG +  WG  +  +G LG G   +   P  ++G   G  V+
Sbjct: 155 S-GVTAIAAGGDHTCALMSSGGVMCWG--DNYYGQLGDGTTTNRRTPVAVSGLPSG--VT 209

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVW 402
           +++ G  HT  +T +G+++ +G   +G LG G    S STP  V  L    T  AA G+ 
Sbjct: 210 AIAAGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGGL- 268

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
           HT A++            SSG ++ WG  D G+LG G       P  V+ L       ++
Sbjct: 269 HTCALM------------SSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGL-PSGVTAIA 315

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVA 521
            G   T ALT +G V+  G   +GQLGD     +  P  V G    + VE IA GDYH  
Sbjct: 316 AGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGL--PSGVETIAAGDYHTC 373

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            L S   V+ WG+  +G+LG G T  R+ P+ V  L    V +I  G   T A+
Sbjct: 374 ALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSG-VTAIAAGGLHTCAL 426



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 159/344 (46%), Gaps = 26/344 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V  IA GG H   +T  G V  WG    G+LG G  +  S P  +  L +  V  +A G 
Sbjct: 55  VTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPS-GVTAIAAGN 113

Query: 295 HHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           +HTCA+T SG +  WG    N+ G LG+G       P  ++G   G  V++++ G  HT 
Sbjct: 114 YHTCALTGSGGVRCWG---ANYSGQLGNGLTFGRSTPGAVSGLPSG--VTAIAAGGDHTC 168

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            + S+G +  +GD  +G LG G   +  TP  V  L    T  AA G+ HT A+      
Sbjct: 169 ALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGVTAIAAGGL-HTCALT----- 222

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKE-ARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   SG+++ WG    G+LG G    +R  P  V  L       ++ G   T AL 
Sbjct: 223 -------GSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGL-PSGMTAIAAGGLHTCALM 274

Query: 473 TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
           ++G V+  G    GQLGD    +   P  V G    + V  IA GDYH   LT   EV+ 
Sbjct: 275 SSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGL--PSGVTAIAAGDYHTCALTGSGEVWC 332

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           WG    G+LG G T  R+ P+ V  L    V++I  G   T A+
Sbjct: 333 WGGNGFGQLGDGTTTARSTPAAVSGLPSG-VETIAAGDYHTCAL 375



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 109/242 (45%), Gaps = 21/242 (8%)

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
           PL+G  V++++ G  HT  +T +G +  +G   FG LG G   + STP  V  L    T 
Sbjct: 51  PLQG--VTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSGVTA 108

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            AA G +HT A+              SG +  WG    G+LG+G    R  P  V+ L  
Sbjct: 109 IAA-GNYHTCALT------------GSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGL-P 154

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIA 514
                ++ G   T AL ++G V   G   YGQLGD    N + P  V G    + V  IA
Sbjct: 155 SGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGL--PSGVTAIA 212

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNFPSLVEALKDKQVKSIVCGTSFTA 573
            G  H   LT   EV+ WG    G+LG G T   R+ P+ V  L    + +I  G   T 
Sbjct: 213 AGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSG-MTAIAAGGLHTC 271

Query: 574 AI 575
           A+
Sbjct: 272 AL 273



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 16/199 (8%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G V+ WG    DG LG          G   +   P AV S +   V  IA GG H   
Sbjct: 581 SSGGVWCWGA-NFDGQLG---------DGTTTNRTTPVAV-SGLPSGVTAIAAGGWHTCA 629

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +T  GEV+ WG+   G+LG G  ++ S P  +  L +  V  +A G  HTCA+T SG+++
Sbjct: 630 LTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGWEHTCALTSSGEVW 688

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG  +  +G LG G   +   P  ++G   G  V++++ G +HT  +T +G +  +G+ 
Sbjct: 689 CWG--DNYYGQLGDGTTTNRSTPGAVSGLPSG--VTAIAAGVYHTCALTGSGGVMCWGNN 744

Query: 368 TFGVLGHGDRISVSTPREV 386
             G LG G  +  +TP +V
Sbjct: 745 GDGQLGDGRPLYRTTPVDV 763


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 169/343 (49%), Gaps = 27/343 (7%)

Query: 192 VFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           V+ WG  T  G LG GGI              +P+ ++      VQ  ACG  H  L+TK
Sbjct: 3   VYCWGN-TVHGELGLGGIEDE--------QVLLPREMDWCHSSSVQQAACGTSHTLLLTK 53

Query: 251 QGEVFSWGEELGGRLGHGVDSDVS-HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            G++FS G    G+LGH  D   +  P+ I +L+N  V  V+CG  H+ A+T  G +++W
Sbjct: 54  DGKLFSCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSW 113

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G ++   G LGH  ++  +   ++   +    V  ++ G +H+  +T++G+LF++G   +
Sbjct: 114 GSNSI--GQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGY 171

Query: 370 GVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG G     V TP  V SL G+     ACG  H+ AV              SG +F W
Sbjct: 172 GQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAV------------SKSGAIFGW 219

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G    G+LG  D  +R  P  +  L       +SCG   +  LT  G V+T G+  +GQL
Sbjct: 220 GKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQL 279

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVY 530
           G    + ++  R+  +L  + + +IACG  H +A + SR ++Y
Sbjct: 280 GHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 165/331 (49%), Gaps = 28/331 (8%)

Query: 254 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           V+ WG  + G LG G   D  V  P+ +D   + +V+  ACG  HT  +T  G +++ G 
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCG- 61

Query: 312 SNCNFGLLGHGNEMSLWLPKK---LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            N + G LGH  +    LP K       LE   V+ VSCG  H+  +T+ GQ+F++G  +
Sbjct: 62  -NNDHGQLGHDTDC---LPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNS 117

Query: 369 FGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            G LGH  D  + +TPR + ++     V+ A G +H+ A+             +SG+LF+
Sbjct: 118 IGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALT------------NSGELFS 165

Query: 428 WGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           WG    G+LG G    ++V PT V +L       ++CG + + A++ +G ++  G   +G
Sbjct: 166 WGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 225

Query: 487 QLG-DPKANGKLPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           QLG +   +   P ++  K  +N  V  I+CGD   A LT    V+T G G  G+LGHG 
Sbjct: 226 QLGLNDLVSRCFPQQL--KTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGT 283

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             +   P +V  L   ++  I CG   T A 
Sbjct: 284 CSNEILPRMVFELMGSKITQIACGRRHTLAF 314


>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
 gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
          Length = 1175

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 181/410 (44%), Gaps = 81/410 (19%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSF---VPKAVESAVVLDVQNIACGGRHAAL 247
           ++F WG C             G     K D++   +PKA++   +  +  I CG  H   
Sbjct: 8   ELFAWGSC-----------EEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVF 56

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +T  GEV+S G     +LGHG  S     K++ AL++  +  VACG +H  A+T +G ++
Sbjct: 57  LTIDGEVYSCGCNEFQQLGHG-QSGGQLAKVV-ALEHYRIISVACGAYHNAAITYNGLLF 114

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           TW G N N  L   G++  +    KL   L    V  VS G  HT V+T   ++F FG  
Sbjct: 115 TW-GCNSNGQLGREGDDTGV----KLVRALSDHKVVQVSLGVEHTLVLTDTARVFAFGSN 169

Query: 368 TFGVLGHG--DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
             G LG G     SVS P+++  L GL   R   G WH+  +              SG L
Sbjct: 170 LKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLT------------VSGSL 217

Query: 426 FTWGDGDRGRLGH-------GDKEARL--------------------------------- 445
           + WG  + G+LG         D +  L                                 
Sbjct: 218 YAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVS 277

Query: 446 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKL 505
           +PT V  L       ++CG + TVALT  G V+T G+  YGQLG  ++   +   V  K+
Sbjct: 278 IPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNEST--IGISVPRKI 335

Query: 506 TK---NFVEEIACGDYHVAVLTSRT-EVYTWGKGANGRLGHGDTDDRNFP 551
           T+   N V +IACG +H   L  +T  ++ +G+G N +LG GDT +R  P
Sbjct: 336 TEFMGNVVTQIACGRFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLP 385



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 154/351 (43%), Gaps = 76/351 (21%)

Query: 140 CGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSL-GDVFIWGEC 198
           C     L  G S G+   +  L  + +R+       S + G+ H+   +  G +F WG C
Sbjct: 68  CNEFQQLGHGQSGGQLAKVVAL--EHYRII------SVACGAYHNAAITYNGLLFTWG-C 118

Query: 199 TGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 258
             +G LG    R G   GVK+       V +     V  ++ G  H  ++T    VF++G
Sbjct: 119 NSNGQLG----REGDDTGVKL-------VRALSDHKVVQVSLGVEHTLVLTDTARVFAFG 167

Query: 259 EELGGRLGHGVDSD--VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 316
             L G+LG G  S+  VS P+ I  L  + V  +  G  H+  +T+SG +Y WG +  N+
Sbjct: 168 SNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSN--NY 225

Query: 317 GLLG----------HGNEMSLWL----------PKKLNGP-------------------L 337
           G LG          H NE++L             +  N P                   L
Sbjct: 226 GQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTL 285

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVR 396
            G  V  ++CG  HT  +T  G +FTFG G +G LGH +  I +S PR++    G    +
Sbjct: 286 RGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKITEFMGNVVTQ 345

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
            ACG +HT A+V             +G+LF +G G   +LG GD + RL+P
Sbjct: 346 IACGRFHTLALVP-----------KTGRLFAFGQGTNAQLGMGDTKNRLLP 385



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 6/157 (3%)

Query: 421 SSGKLFTWGDGDRGRLGHGDKEAR--LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
           ++ +LF WG  + G+L     +A   L+P  +     P   Q++CG++ TV LT  G VY
Sbjct: 5   ATEELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGEVY 64

Query: 479 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
           + G   + QLG  ++ G+L   V   L    +  +ACG YH A +T    ++TWG  +NG
Sbjct: 65  SCGCNEFQQLGHGQSGGQLAKVV--ALEHYRIISVACGAYHNAAITYNGLLFTWGCNSNG 122

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG  + DD     LV AL D +V  +  G   T  +
Sbjct: 123 QLGR-EGDDTGV-KLVRALSDHKVVQVSLGVEHTLVL 157



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 6/116 (5%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDA 281
           +P  V++    +V  +ACG  H   +T+ G VF++G    G+LGH   +  +S P+ I  
Sbjct: 278 IPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKITE 337

Query: 282 LKNINVELVACGEHHTCA-VTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNG 335
                V  +ACG  HT A V  +G ++ +G G+N     LG G+  +  LP  + G
Sbjct: 338 FMGNVVTQIACGRFHTLALVPKTGRLFAFGQGTNAQ---LGMGDTKNRLLPCPVKG 390


>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
           tropicalis]
 gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
          Length = 729

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 168/343 (48%), Gaps = 37/343 (10%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+CG  H  LVT  G+++ +G    G+LG    S +S P  + ALK+  V L ACG HHT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHT 101

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G +Y+ GG+  + G LG G+       ++++       +  +S G   +A +T 
Sbjct: 102 LVYTEQGKLYSSGGN--SEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTV 159

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G LG        TP++VD+ K +  +  +CG +H+A V +        
Sbjct: 160 DGKLFMWGDNSEGQLGLEKGTIYCTPQKVDTGKPIAWI--SCGYYHSAFVTQ-------- 209

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN--------FCQVSCGHSLTV 469
                G+L+T+G+ + G+LG       L P  +    +P            VSCG   T+
Sbjct: 210 ----DGELYTFGEPENGKLG-------LPPDKIKKHKKPQRVLGLSGKVTMVSCGGEHTI 258

Query: 470 ALTTTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           A+T    VYT G   +GQLG         +P  V+  LTK  +  + CG+ H A++T + 
Sbjct: 259 AVTEK-EVYTFGLGQFGQLGHGTFIFETHIPKAVDA-LTKKKIRYVTCGENHTAIITEKG 316

Query: 528 EVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
            +YT+G G +G+LG G+ +  N   P L        V+S+ CG
Sbjct: 317 LLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACG 359



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 142/298 (47%), Gaps = 23/298 (7%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           LKN     ++CG+ HT  VT +G +Y +G +  N+G LG     ++  P  +   L+   
Sbjct: 34  LKNDKPARISCGDEHTVLVTGNGKLYVFGSN--NWGQLGVEAGSAISKPTCVKA-LKSEK 90

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V   +CG  HT V T  G+L++ G  + G LG GD    ++ +E+        ++     
Sbjct: 91  VVLAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAG 150

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            + +A + V            GKLF WGD   G+LG         P  V    +P    +
Sbjct: 151 SNMSAALTV-----------DGKLFMWGDNSEGQLGLEKGTIYCTPQKVDT-GKP-IAWI 197

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDY 518
           SCG+  +  +T  G +YT G P  G+LG   D     K P RV G   K  V  ++CG  
Sbjct: 198 SCGYYHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSGK--VTMVSCGGE 255

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H   +T + EVYT+G G  G+LGHG    + + P  V+AL  K+++ + CG + TA I
Sbjct: 256 HTIAVTEK-EVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTAII 312



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 142/295 (48%), Gaps = 29/295 (9%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK-NINVELVACGEHHT 297
           ACG  H  + T+QG+++S G    G+LG G  +  +  + I        ++ ++ G + +
Sbjct: 95  ACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMS 154

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+T+ G ++ WG  + + G LG         P+K++    G  ++ +SCG +H+A VT 
Sbjct: 155 AALTVDGKLFMWG--DNSEGQLGLEKGTIYCTPQKVD---TGKPIAWISCGYYHSAFVTQ 209

Query: 358 AGQLFTFGDGTFGVLG-HGDRISV-STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            G+L+TFG+   G LG   D+I     P+ V  L G +    +CG  HT AV E  V   
Sbjct: 210 DGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSG-KVTMVSCGGEHTIAVTEKEV--- 265

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                     +T+G G  G+LGHG       +P  V AL +     V+CG + T  +T  
Sbjct: 266 ----------YTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTAIITEK 315

Query: 475 GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVLTS 525
           G +YT G   +G+LG  + N     +    L  NF    V+ +ACG  H+ V  +
Sbjct: 316 GLLYTFGDGRHGKLGLGEEN--FTNQFVPILCSNFLKFTVQSVACGGCHMLVFAT 368



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--P 276
            ++ +PKAV++     ++ + CG  H A++T++G ++++G+   G+LG G ++  +   P
Sbjct: 283 FETHIPKAVDALTKKKIRYVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVP 342

Query: 277 KLIDALKNINVELVACGEHH 296
            L        V+ VACG  H
Sbjct: 343 ILCSNFLKFTVQSVACGGCH 362


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 180/356 (50%), Gaps = 28/356 (7%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+ +E+   L +   A G RH+ L+     V+S G+   G+LG         P+ I AL 
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 229

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
            ++++LV+CG+ H+ AV   G ++TWG GS    G +G   E+S ++P K+N  L GI +
Sbjct: 230 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLG-IGESKEIS-FMPTKINS-LAGIKI 286

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGV 401
             VSCG +H+  ++  GQ+F++G    G LG G+ + S ++P++V SL+G+   + A G 
Sbjct: 287 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 346

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNF 458
            H+ A+   ++G+S          F WG+   G+L   G+  KE    P  + AL   N 
Sbjct: 347 THSFAL--SLMGTS----------FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNV 394

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
             +SCG+  T  LT  G V+T G     QL   P++    P  +EG      V +I CG 
Sbjct: 395 VYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGS 452

Query: 518 YH-VAVLTSRTEVYTWGKG--ANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCG 568
           YH +A + +  +V + G+G        H +    +   L+ A  L D +VK I  G
Sbjct: 453 YHTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAG 508



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 13/221 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG    +G LG G          K  SF+P  + S   + +  ++CG  H+  ++
Sbjct: 250 GRVFTWG-AGSEGQLGIG--------ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALS 300

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           + G+VFSWG    G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + 
Sbjct: 301 EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFG 360

Query: 309 WGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG +      L G+  +  ++ P  + G L+ ++V  +SCG  HT+V+T  GQ+FTFG  
Sbjct: 361 WGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGS 419

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           +   L H  R     P+ ++ + G    +  CG +HT A V
Sbjct: 420 SSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYV 459


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 180/356 (50%), Gaps = 28/356 (7%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+ +E+   L +   A G RH+ L+     V+S G+   G+LG         P+ I AL 
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 229

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
            ++++LV+CG+ H+ AV   G ++TWG GS    G +G   E+S ++P K+N  L GI +
Sbjct: 230 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLG-IGESKEIS-FMPTKINS-LAGIKI 286

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGV 401
             VSCG +H+  ++  GQ+F++G    G LG G+ + S ++P++V SL+G+   + A G 
Sbjct: 287 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 346

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNF 458
            H+ A+   ++G+S          F WG+   G+L   G+  KE    P  + AL   N 
Sbjct: 347 THSFAL--SLMGTS----------FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNV 394

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
             +SCG+  T  LT  G V+T G     QL   P++    P  +EG      V +I CG 
Sbjct: 395 VYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGS 452

Query: 518 YH-VAVLTSRTEVYTWGKG--ANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCG 568
           YH +A + +  +V + G+G        H +    +   L+ A  L D +VK I  G
Sbjct: 453 YHTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAG 508



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 13/221 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG    +G LG G          K  SF+P  + S   + +  ++CG  H+  ++
Sbjct: 250 GRVFTWG-AGSEGQLGIG--------ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALS 300

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           + G+VFSWG    G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + 
Sbjct: 301 EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFG 360

Query: 309 WGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG +      L G+  +  ++ P  + G L+ ++V  +SCG  HT+V+T  GQ+FTFG  
Sbjct: 361 WGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGS 419

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           +   L H  R     P+ ++ + G    +  CG +HT A V
Sbjct: 420 SSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYV 459


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 177/384 (46%), Gaps = 49/384 (12%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G  ++   P   +++   D+  +  G    A++T  GEV+S G    G+ G G + D + 
Sbjct: 27  GDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYNSEGQCGIG-EIDETV 85

Query: 276 PKLIDALKNIN-----------VELV--ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
           P+++ +L  +            V LV    G  H   VT  G++ T G +N   G LGHG
Sbjct: 86  PEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRNNS--GQLGHG 143

Query: 323 NEMSLW-LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
                + LP+ + G   G  V+ V+C   HT VVT   + +TFG   +G LGHGD  S S
Sbjct: 144 EVGKGYSLPRPVAG-FAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRS 202

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P  +   +GL  +  ACGV+HT   V            +SG L+++G  D G+LG    
Sbjct: 203 APAALACFQGLGVLSVACGVYHTVVSV------------ASGGLYSFGKNDHGQLGLEGG 250

Query: 442 EARLVPT---CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-----DPKA 493
           E+R  P       ++VE    Q++CG+  TVAL+  G V   G   YGQLG         
Sbjct: 251 ESRFTPVQHRACTSVVE----QLACGYYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQ 306

Query: 494 NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL 553
            G++P      L    + ++ACG YH   L     VY +G+  +G+LG G  +D   P  
Sbjct: 307 GGQVP-----DLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCF 361

Query: 554 VEALKDKQVKSIVCGTSFTAAICL 577
           VE L    V  +  G  F   +CL
Sbjct: 362 VEGLSQSFVCQVAAG--FYHTLCL 383



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 141/286 (49%), Gaps = 19/286 (6%)

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCA 299
           G  H  +VT++GE+ + G    G+LGHG V    S P+ +       V  VAC   HT  
Sbjct: 116 GSEHLVVVTEEGELQTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVV 175

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           VT     +T+GG+   +G LGHG+  S   P  L    +G+ V SV+CG +HT V  ++G
Sbjct: 176 VTDDDRTWTFGGNG--YGQLGHGDHSSRSAPAAL-ACFQGLGVLSVACGVYHTVVSVASG 232

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            L++FG    G LG     S  TP +  +   +   + ACG +HT A+            
Sbjct: 233 GLYSFGKNDHGQLGLEGGESRFTPVQHRACTSV-VEQLACGYYHTVALSR---------- 281

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
             +G++  +G  D G+LG G +E+      V  L      QV+CG   T++L   G VY 
Sbjct: 282 --AGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYP 339

Query: 480 MGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
            G   +GQLG   + +   P  VEG L+++FV ++A G YH   LT
Sbjct: 340 FGRNNHGQLGTGTREDACRPCFVEG-LSQSFVCQVAAGFYHTLCLT 384



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 119/250 (47%), Gaps = 16/250 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           +P+ V       V  +AC   H  +VT     +++G    G+LGHG  S  S P  +   
Sbjct: 151 LPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAALACF 210

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + V  VACG +HT     SG +Y++G ++   G LG     S + P +         V
Sbjct: 211 QGLGVLSVACGVYHTVVSVASGGLYSFGKND--HGQLGLEGGESRFTPVQHRACTS--VV 266

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
             ++CG +HT  ++ AG++  FG   +G LG G R S     +V  L GLR ++ ACG +
Sbjct: 267 EQLACGYYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVACGSY 326

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
           HT ++ +             G+++ +G  + G+LG G +E    P  V  L +   CQV+
Sbjct: 327 HTISLDD------------EGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVCQVA 374

Query: 463 CGHSLTVALT 472
            G   T+ LT
Sbjct: 375 AGFYHTLCLT 384



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 29/230 (12%)

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
           +L+ FG    G LG GD +   TP    + +G   V    G   TA +            
Sbjct: 12  ELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLT----------- 60

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEA---RLVPTCV-AALVEPNF---CQVSCGHS-----L 467
            ++G++++ G    G+ G G+ +     +VP+     L EP+F    +VS  HS      
Sbjct: 61  -NTGEVYSCGYNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEH 119

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGK---LPTRVEGKLTKNFVEEIACGDYHVAVLT 524
            V +T  G + T G    GQLG  +  GK   LP  V G      V ++AC   H  V+T
Sbjct: 120 LVVVTEEGELQTCGRNNSGQLGHGEV-GKGYSLPRPVAG-FAGYRVTKVACSYSHTVVVT 177

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
                +T+G    G+LGHGD   R+ P+ +   +   V S+ CG   T  
Sbjct: 178 DDDRTWTFGGNGYGQLGHGDHSSRSAPAALACFQGLGVLSVACGVYHTVV 227



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 15/166 (9%)

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           +L+ +G    G LG GD   R  PT        +   V+ G+ LT  LT TG VY+ G  
Sbjct: 12  ELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYN 71

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC-------------GDYHVAVLTSRTEVY 530
             GQ G  + +  +P  V   LTK  + E +              G  H+ V+T   E+ 
Sbjct: 72  SEGQCGIGEIDETVPEMVP-SLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQ 130

Query: 531 TWGKGANGRLGHGDT-DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           T G+  +G+LGHG+     + P  V      +V  + C  S T  +
Sbjct: 131 TCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVV 176


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 166/335 (49%), Gaps = 22/335 (6%)

Query: 236 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
           +++ACG  H ALVT+ G +F++G    G+LG       + P  +  LK   V++VACG  
Sbjct: 39  KSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRI 98

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           HT   T SG +YT+G +    G LG  +  S   P K+    E     +++ G  H+  +
Sbjct: 99  HTIVATESGCLYTFGAN--GDGQLGVEDIPSSNCPVKVE--CEPRQYKALAAGADHSVAL 154

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           T  G+L+ +G G+ G LG GD    STP  + +    + +  ACG +HTA V +V     
Sbjct: 155 TDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDN--KVISVACGYYHTAFVTDV----- 207

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                  G++FT+G+GD G+LG G    + V      + E     V+CG S TV LT  G
Sbjct: 208 -------GEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPE-KAKSVACGGSHTVVLTECG 259

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VYT G    GQLG         T V     K+ V +IA G+ H A++T + ++YT+G G
Sbjct: 260 KVYTFGEGGNGQLGHKNKYFYCETPVWLNF-KHKVTQIAAGENHTALVTEKGQLYTFGDG 318

Query: 536 ANGRLG--HGDTDDRNFPSLVEALKDKQVKSIVCG 568
            + +LG  H    ++ FP   +      V  + CG
Sbjct: 319 RHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCG 353



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 147/293 (50%), Gaps = 26/293 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACG  H  + T+ G ++++G    G+LG       + P  ++  +    + +A G 
Sbjct: 90  VKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVEC-EPRQYKALAAGA 148

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
            H+ A+T  G++Y WGG   + G LG G+      P  L+       V SV+CG +HTA 
Sbjct: 149 DHSVALTDDGELYVWGGG--SEGQLGLGDIDDKSTPTLLS---TDNKVISVACGYYHTAF 203

Query: 355 VTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           VT  G++FTFG+G  G LG G D      P++V+  +  ++V  ACG  HT  + E    
Sbjct: 204 VTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSV--ACGGSHTVVLTEC--- 258

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                    GK++T+G+G  G+LGH +K      T V    +    Q++ G + T  +T 
Sbjct: 259 ---------GKVYTFGEGGNGQLGHKNK-YFYCETPVWLNFKHKVTQIAAGENHTALVTE 308

Query: 474 TGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
            G +YT G   + +LG   +  +N   P R + + +K  V +++CG  H+ VL
Sbjct: 309 KGQLYTFGDGRHAKLGLDHECYSNQYFPQRSK-RFSKFIVTQVSCGGCHMIVL 360



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 122/282 (43%), Gaps = 61/282 (21%)

Query: 303 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           SG ++T+G S       G       W+         G    SV+CG  HTA+VT +G+LF
Sbjct: 12  SGAIFTFGKSR-----FGDNLPNKFWV--------RGDKAKSVACGDEHTALVTESGRLF 58

Query: 363 TFGDGTFGVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVE------------ 409
           TFG   +G LG  D + VST P  V  LK  +    ACG  HT    E            
Sbjct: 59  TFGVNDWGQLGI-DEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGD 117

Query: 410 --VMVGSSSSSNC-------------------------SSGKLFTWGDGDRGRLGHGDKE 442
             + V    SSNC                           G+L+ WG G  G+LG GD +
Sbjct: 118 GQLGVEDIPSSNCPVKVECEPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGDID 177

Query: 443 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK--LPTR 500
            +  PT ++   +     V+CG+  T  +T  G V+T G    G+LG     GK   P +
Sbjct: 178 DKSTPTLLS--TDNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKK 235

Query: 501 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
           V         + +ACG  H  VLT   +VYT+G+G NG+LGH
Sbjct: 236 VN---IPEKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGH 274



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 110/224 (49%), Gaps = 31/224 (13%)

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           +  +G +FTFG   F     GD +    P +   ++G +    ACG  HTA V E     
Sbjct: 9   IPESGAIFTFGKSRF-----GDNL----PNKF-WVRGDKAKSVACGDEHTALVTE----- 53

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                  SG+LFT+G  D G+LG  + +    P CV  L       V+CG   T+  T +
Sbjct: 54  -------SGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATES 106

Query: 475 GHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
           G +YT G+   GQLG    P +N   P +VE +  +   + +A G  H   LT   E+Y 
Sbjct: 107 GCLYTFGANGDGQLGVEDIPSSN--CPVKVECEPRQ--YKALAAGADHSVALTDDGELYV 162

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           WG G+ G+LG GD DD++ P+L+    D +V S+ CG   TA +
Sbjct: 163 WGGGSEGQLGLGDIDDKSTPTLLST--DNKVISVACGYYHTAFV 204



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 98/196 (50%), Gaps = 41/196 (20%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD--VQNIACGGRHAAL 247
           G++++WG               GS   + +     K+  + +  D  V ++ACG  H A 
Sbjct: 158 GELYVWG--------------GGSEGQLGLGDIDDKSTPTLLSTDNKVISVACGYYHTAF 203

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV----ELVACGEHHTCAVTLS 303
           VT  GEVF++GE  GG+LG G D    + K + A K +N+    + VACG  HT  +T  
Sbjct: 204 VTDVGEVFTFGEGDGGKLGQGTD----YGKAV-APKKVNIPEKAKSVACGGSHTVVLTEC 258

Query: 304 GDMYTWG-GSNCNFGLLGHGN-----EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           G +YT+G G N   G LGH N     E  +WL  K         V+ ++ G  HTA+VT 
Sbjct: 259 GKVYTFGEGGN---GQLGHKNKYFYCETPVWLNFKHK-------VTQIAAGENHTALVTE 308

Query: 358 AGQLFTFGDGTFGVLG 373
            GQL+TFGDG    LG
Sbjct: 309 KGQLYTFGDGRHAKLG 324


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 182/405 (44%), Gaps = 51/405 (12%)

Query: 198 CTGDGILGGGIHRSGSYA--GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF 255
           C  DG LG G  R  + A   V   +F PK +   +  ++  ++CG RH   +T  G V+
Sbjct: 17  CNDDGQLGTGAKRRPTLAIDDVSASNF-PKQLGGLLGEEIVAVSCGSRHTMALTASGAVY 75

Query: 256 SWGEELGGRLGHGVDSDVSHPKLIDALKN--INVELVACGEHHTCAVTLSGDMYTWGGSN 313
           SWG    G+LGHG    ++ P+ I   +   + V+ V+CG  H+ AVT  G +Y WG   
Sbjct: 76  SWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYMWG--E 133

Query: 314 CNFGLLGHGNEMSLWLPKKLNGP----------LEGI---HVSSVSCGPWHTAVVTSAGQ 360
            ++G LG        LPK+              LEG+    V  VSCG  HTA +T+ G+
Sbjct: 134 THWGQLG--------LPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGR 185

Query: 361 LFTFGDGTFGVLGHGDR----------ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           ++ +G G  G LG G            + VS P  V+   G + V+ ACG +H+AAV E 
Sbjct: 186 VYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTE- 244

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                       G ++ WG  D G LG G    +  P  V    +    +VSCG   T+ 
Sbjct: 245 -----------QGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMV 293

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
           +  +G  Y  G   YG+LG      +    +   L    V + ACG  H   +TS    Y
Sbjct: 294 VAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAY 353

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G+  +GRLG  D    + P+ ++ L    V+ +  G + + A+
Sbjct: 354 VAGRPDHGRLGMTDMKPLSVPTRLD-LGPIPVRQVSAGGAHSMAL 397



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/248 (37%), Positives = 121/248 (48%), Gaps = 26/248 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV----DSD------VSHPKLIDALKN 284
           V  ++CGG H A +T  G V+ WG    G+LG G     D+D      VS P L++    
Sbjct: 167 VVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNG 226

Query: 285 INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 344
             V  VACG  H+ AVT  G +Y WG  +  +G+LG G       PK++    + I    
Sbjct: 227 EKVVQVACGAFHSAAVTEQGHVYIWGKED--YGMLGVGQTSDQQTPKRVE-FFDDIPALR 283

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
           VSCG WHT VV  +G  + FG G +G LG GD  S + P  V +LKG   ++AACG  HT
Sbjct: 284 VSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHT 343

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
             V             S G  +  G  D GRLG  D +   VPT +     P   QVS G
Sbjct: 344 LFVT------------SDGIAYVAGRPDHGRLGMTDMKPLSVPTRLDLGPIP-VRQVSAG 390

Query: 465 HSLTVALT 472
            + ++ALT
Sbjct: 391 GAHSMALT 398



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 97/205 (47%), Gaps = 13/205 (6%)

Query: 188 SLGDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFV----PKAVESAVVLDVQNIACGG 242
           +LG V++WG   GD G LG G   S        +  +    P  VE      V  +ACG 
Sbjct: 182 NLGRVYVWGR--GDSGQLGIG---SAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGA 236

Query: 243 RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
            H+A VT+QG V+ WG+E  G LG G  SD   PK ++   +I    V+CG  HT  V  
Sbjct: 237 FHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAK 296

Query: 303 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           SGD Y +G     +G LG G+  S   P  +   L+G  V   +CG  HT  VTS G  +
Sbjct: 297 SGDCYAFG--RGEYGRLGLGDTKSRTRPHLVKA-LKGQTVIQAACGGSHTLFVTSDGIAY 353

Query: 363 TFGDGTFGVLGHGDRISVSTPREVD 387
             G    G LG  D   +S P  +D
Sbjct: 354 VAGRPDHGRLGMTDMKPLSVPTRLD 378


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 187/403 (46%), Gaps = 27/403 (6%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           VF WG CT DG LG     SG    V   S  P+ V +     ++ I+CG RH  ++ + 
Sbjct: 3   VFSWG-CTQDGQLG----ISGLGDDVPSLS-SPREVPALAGKQIREISCGLRHTCVLLRD 56

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G V   G    G+LG   D   S    + A + + +  V+CG  HT AVT  G +  WG 
Sbjct: 57  GTVMMCGANDRGQLGQ--DRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGR 114

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           ++     L  G+      P+ L   L    V+ V+CG  H+  +T  G++F +GD +FG 
Sbjct: 115 NDRGQCGLSTGDSEDKRKPRFLKS-LSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQ 173

Query: 372 LG---HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           LG    G  +    P+++ SL G+   R ACG WH+ A+              SG +F W
Sbjct: 174 LGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFAL------------SVSGAVFGW 221

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G  + G+LG G  E R+ PT +  L       ++CG + T  LT +G ++  G    GQL
Sbjct: 222 GKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQL 281

Query: 489 GDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRT-EVYTWGKGANGRLGHGDTD 546
           G    + ++ P  V+G L    + ++ACG  H  VL  RT   ++ G+G+ G+LG  +  
Sbjct: 282 GHGSHSNEVNPRSVQGFLGSE-ITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDS 340

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMC 589
            ++  S V    +    +  C     +   +    +G DQS C
Sbjct: 341 SKSCASPVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFC 383



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 195/465 (41%), Gaps = 71/465 (15%)

Query: 166 FRVSLSSA-VSSSSQGSGHDDGDSL-GDVFIWGECT----GDGILGGGIHRSGSYAGVKM 219
           F  SLSS  V+  + GS H    +  G +F WG+ +    G G  G  ++R         
Sbjct: 135 FLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDH------- 187

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
               P+ + S   + ++ +ACGG H+  ++  G VF WG+   G+LG G   D   P  +
Sbjct: 188 ----PQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPL 243

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
             LK   V+ +ACG+++T  +T SG ++ +G GS    G LGHG+  +   P+ + G L 
Sbjct: 244 KNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSE---GQLGHGSHSNEVNPRSVQGFL- 299

Query: 339 GIHVSSVSCGPWHTAVVTS-AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           G  ++ V+CG  HT V+    G+ F+ G G+ G LG  +  S S    V           
Sbjct: 300 GSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVP---------- 349

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSS--GKLFTWGDGDRGRLGHGD--------KEA---- 443
             G W   +  E   G S+     S  G +F  GD     +  G+        +EA    
Sbjct: 350 --GPWEAPSSTE---GCSNGEESRSIIGSIFAGGDQSFCIVSRGNDPDHPLDFREAIPSI 404

Query: 444 ------------------RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
                              L P+     +E      +C ++  +    +G ++  G    
Sbjct: 405 EPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSSPACLNASFLVGAGSGGLFLFGQGSE 464

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT-EVYTWGKGANGRLGHGD 544
           GQLG    + ++  R       N + ++ACG  H  VL  RT   Y+ G+G+ G+LG  +
Sbjct: 465 GQLGHGSHSNEVNPRSVKDFLGNEITQVACGRQHTLVLEGRTGGFYSLGQGSKGQLGLDN 524

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMC 589
              ++  SLV    +    +  C     +   +    +G DQS C
Sbjct: 525 GSSKSCASLVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFC 569


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 165/340 (48%), Gaps = 24/340 (7%)

Query: 219 MDSFV--PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
           MDS +  P +    VVL    ++ G  H+  +     + SWG    G+LGHG   D   P
Sbjct: 1   MDSVMAAPDSPPQTVVL----VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVP 56

Query: 277 KLIDALKNINVELVACGEHHTCAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
            ++       +  V CG  HT A +     +Y+WG  +  FG LGHGN   ++ P+ +  
Sbjct: 57  TVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGD--FGRLGHGNSSDVFTPQPVK- 113

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            L+G+ +  ++CG  H   VT AG++ ++G    G LG G       P+++ + + +   
Sbjct: 114 ALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK 173

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
             A G  HTAAV E             G L+ WG G  G LG GD+  RL+P  V+++  
Sbjct: 174 MIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEG 221

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA 514
                V+CG   T+ ++ +G++YT G   YGQLG       L P +VE  L  + + +I+
Sbjct: 222 EKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSTISQIS 280

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 554
            G  H   LTS  ++Y WG    G++G G+ DD + P  V
Sbjct: 281 GGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQV 320



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 171/347 (49%), Gaps = 44/347 (12%)

Query: 122 DAVLYA--APPK-VLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRVSLS 171
           D+V+ A  +PP+ V+L S  A  SV  L+         G DG+ GH  G + D    ++ 
Sbjct: 2   DSVMAAPDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGH--GDAEDRLVPTVL 59

Query: 172 S-----AVSSSSQGSGHDDGDSLGDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPK 225
           S     A++S   G+ H    S  ++ ++    GD G LG          G   D F P+
Sbjct: 60  SGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLG---------HGNSSDVFTPQ 110

Query: 226 AVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI 285
            V++   L ++ IACG  H   VT  GEV SWG    G+LG G   D   P+ I A +++
Sbjct: 111 PVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESV 170

Query: 286 NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
            V+++A G  HT AVT  GD+Y WG     +G LG G+     LP+K++  +EG  +  V
Sbjct: 171 CVKMIAAGAEHTAAVTEDGDLYGWGWG--RYGNLGLGDRNDRLLPEKVS-SVEGEKMVLV 227

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW-HT 404
           +CG  HT  V+ +G L+T+G   +G LGHGD      P +V++LK   T+    G W HT
Sbjct: 228 ACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD-STISQISGGWRHT 286

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
            A+             S GKL+ WG    G++G G+ +    P  V+
Sbjct: 287 MALT------------SEGKLYGWGWNKFGQVGVGNNDDHSSPGQVS 321



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 141/291 (48%), Gaps = 18/291 (6%)

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           V LV+ G  H+ A+     + +WG      G LGHG+     +P  L+G  +   ++SV 
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWG--RGEDGQLGHGDAEDRLVPTVLSG-FDAPAITSVI 71

Query: 347 CGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 405
           CG  HT A      Q++++G G FG LGHG+   V TP+ V +L+GL+  + ACG  H  
Sbjct: 72  CGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCL 131

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
           AV              +G++ +WG    G+LG G  E  L+P  + A        ++ G 
Sbjct: 132 AVT------------MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGA 179

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLT 524
             T A+T  G +Y  G   YG LG    N +L P +V     +  V  +ACG  H   ++
Sbjct: 180 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVL-VACGWRHTITVS 238

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               +YT+G    G+LGHGD +D   P  VEALKD  +  I  G   T A+
Sbjct: 239 DSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMAL 289



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG-DYH 519
           VS G S +VAL T   + + G    GQLG   A  +L   V        +  + CG D+ 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            A      +VY+WG G  GRLGHG++ D   P  V+AL+  ++K I CG S   A+ +
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTM 135


>gi|226492296|ref|NP_001146821.1| uncharacterized protein LOC100280426 [Zea mays]
 gi|219888883|gb|ACL54816.1| unknown [Zea mays]
          Length = 159

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/161 (54%), Positives = 100/161 (62%), Gaps = 14/161 (8%)

Query: 856  MAEMLPVGAVRNSNSFHSSPTPAW----DVSSAAIEQPSSPLTFQGAIPNGSNSLILSNG 911
            MAE LP GA +N+      P P      D+SS A+E   SP +    I NG N L+ SNG
Sbjct: 1    MAERLPGGAAKNT---ELPPLPGISIPSDISSLAMESVGSPSSSGEQIINGHNGLLASNG 57

Query: 912  SDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDL 971
                 N++      SH E   KN +R   AE     EWVEQDE GVYITL ALPGG +DL
Sbjct: 58   PSSVRNKT------SHPE-VGKNGSRPPDAESCHDAEWVEQDEPGVYITLTALPGGARDL 110

Query: 972  KRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVS 1012
            KRVRFSRK+FSE QAEQWW  NRARVYQQYNV +VDKS+ S
Sbjct: 111  KRVRFSRKRFSETQAEQWWQENRARVYQQYNVRVVDKSTAS 151


>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 1598

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 177/385 (45%), Gaps = 49/385 (12%)

Query: 215  AGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
            + V+M SF P       +  V  IACG RH AL+T    ++++G    GRLGHG + D +
Sbjct: 1232 SAVRMVSFPPP------LRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCT 1285

Query: 275  HPKLIDALKNI----NVEL-----VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 325
             P  +    ++     VE      V+CG  HT  VT +GD+Y +G      G LG G   
Sbjct: 1286 DPIPVGYFTSLIAAEGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEA--GRLGTGETG 1343

Query: 326  SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPRE 385
            S   P +++      ++++V+CG  HT  +TS G++F FG G  G LG+G       P  
Sbjct: 1344 SSLYPSRVDLR----NIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFL 1399

Query: 386  VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
            V+ L+    V  A G  H+ A+               G++ TWG G  G LGHG ++  L
Sbjct: 1400 VEGLEEYSIVAIAAGECHSCAL------------SRDGEVLTWGFGSSGALGHGTRDNCL 1447

Query: 446  VPTCV-AALVEPN----------FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN 494
            +PT V      PN             V+CG   T+A T  G +Y  G    GQLG    +
Sbjct: 1448 IPTLVDGPWTNPNVETLIHDISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLS 1507

Query: 495  GK---LPTRVEGKL-TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
             +   + +  E +L T + +  IACG +  AV +++ +++ WG  A G     D +D + 
Sbjct: 1508 AQDLVVLSPKEIRLPTSSGIRGIACGTFTSAVCSTQGQLFMWGSPAAGNGAPLDVEDAHV 1567

Query: 551  PSLVEALKDKQVKSIVCGTSFTAAI 575
               V  L + +   I CG     AI
Sbjct: 1568 KR-VGVLGEFEFSQIACGAYHAVAI 1591



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 153/306 (50%), Gaps = 54/306 (17%)

Query: 185  DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRH 244
            +GD  G  F WGE    G LG G   +GS       S  P  V+   + ++  +ACG  H
Sbjct: 1323 NGDLYG--FGWGEA---GRLGTG--ETGS-------SLYPSRVD---LRNIAAVACGREH 1365

Query: 245  AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
               +T +G VF++G   GGRLG+G ++D   P L++ L+  ++  +A GE H+CA++  G
Sbjct: 1366 TLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALSRDG 1425

Query: 305  DMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEG------IH----VSSVSCGPWHTA 353
            ++ TWG GS+   G LGHG   +  +P  ++GP         IH    V+SV+CG +HT 
Sbjct: 1426 EVLTWGFGSS---GALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSYHTL 1482

Query: 354  VVTSAGQLFTFGDGTFGVLG----HGDRISVSTPREVD--SLKGLRTVRAACGVWHTAAV 407
              T+ G L+ +GD   G LG        + V +P+E+   +  G+R +  ACG +     
Sbjct: 1483 AATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIRGI--ACGTF----- 1535

Query: 408  VEVMVGSSSSSNCSS-GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
                    +S+ CS+ G+LF WG    G     D E   V   V  L E  F Q++CG  
Sbjct: 1536 --------TSAVCSTQGQLFMWGSPAAGNGAPLDVEDAHVKR-VGVLGEFEFSQIACGAY 1586

Query: 467  LTVALT 472
              VA+T
Sbjct: 1587 HAVAIT 1592


>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 388

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 192/397 (48%), Gaps = 51/397 (12%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           V+ WG  T DG LG              D  +P+ +    +  +  +ACGG H   +T  
Sbjct: 17  VWSWGAGT-DGQLG---------TAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSD 66

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G+VF+WG    G+LGHG   +++ PKL+       +   A G  H+  V+ SG ++T G 
Sbjct: 67  GKVFTWGRGSSGQLGHGDILNITLPKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTCG- 125

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
            N +FG LGHG+ MSL  P K++       V  V+CG  H+ V+ +  Q+  FG G  G 
Sbjct: 126 -NGSFGQLGHGDNMSLRTPAKVS-YFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQ 183

Query: 372 LGH---GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           LG    G + SV+ P  V  LK +   R +    H+AA+             + G+ F+W
Sbjct: 184 LGFTSDGTK-SVNLPCVVSGLKDVEVTRISANGDHSAAI------------SADGQFFSW 230

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G   RG     D +    P C+ + +  +F +V+ G +  + LT  G V+ +G+ +  Q 
Sbjct: 231 G---RGFCAGPDVQ---TPQCLPSSL--SFRKVAVGWNHALLLTVDGEVFKLGNTLNKQ- 281

Query: 489 GDPKANGKLPTRVEGKLTK--NF----VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             P+         E  L K  +F    V +IA G  H A +T   +V TWG G +G+LG 
Sbjct: 282 --PEKQQLQIDSSEALLAKVSDFDGVKVLQIAAGAEHSAAVTENGKVKTWGWGEHGQLGL 339

Query: 543 GDTDDRNFPSLVEA----LKDKQVKSIVCGTSFTAAI 575
           G+T+D+  P LV      L+ K++K + CG+ FT A+
Sbjct: 340 GNTNDQTSPQLVSVGSIDLRTKEIK-VYCGSGFTYAV 375



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 18/220 (8%)

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGSSSSS 418
           Q++++G GT G LG         P+ + SL  L ++   ACG  H  A+           
Sbjct: 16  QVWSWGAGTDGQLGTAKLQDELLPQLL-SLTSLPSISMLACGGAHVIALT---------- 64

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
             S GK+FTWG G  G+LGHGD     +P  V+        Q + G S +  ++ +G ++
Sbjct: 65  --SDGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDGYVITQAAAGWSHSGFVSDSGCLF 122

Query: 479 TMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
           T G+  +GQLG     + + P +V    +   V+ +ACG  H  VL +  +V  +G G  
Sbjct: 123 TCGNGSFGQLGHGDNMSLRTPAKVS-YFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKR 181

Query: 538 GRLGHGD--TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G+LG     T   N P +V  LKD +V  I      +AAI
Sbjct: 182 GQLGFTSDGTKSVNLPCVVSGLKDVEVTRISANGDHSAAI 221


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 175/350 (50%), Gaps = 32/350 (9%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           +++  A G RH+ L+   G V + G+   G+LG         P LI AL+ +NV+L++CG
Sbjct: 22  ELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCG 81

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           + H+ AV   G ++ WG GS    G +G   E++ + P K+   L GI +  VSCG +H+
Sbjct: 82  KEHSLAVCHKGRVFAWGAGSEGQLG-IGEFKELN-FTPMKVKA-LAGIKIIQVSCGHYHS 138

Query: 353 AVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             ++  GQ+F++G+ + G LG G + +S  +P+ V SL+G+   + A G  H+ A+    
Sbjct: 139 LALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFAL---- 194

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                     SG  F WG  + G+L   G+        P  + AL E     +SCG   T
Sbjct: 195 --------SLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHT 246

Query: 469 VALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYH--VAVLTS 525
             LT  G V+T G    GQLG  P A  + P  VEG      V +I CG YH  V V T+
Sbjct: 247 AVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEG--IDGLVSQIDCGSYHTLVYVYTT 304

Query: 526 RTEVYTWGKGANGRLGHGDTD----DRNFPSLVEA--LKDKQVKSIVCGT 569
           R +V ++G+G +       +D    + +   L+ A  L + QVK I  GT
Sbjct: 305 R-QVISFGRGPSDTTSSTRSDALTKNSDVSCLISADDLVNVQVKHIFAGT 353



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 136/277 (49%), Gaps = 26/277 (9%)

Query: 139 ACGSVNSLSSGGSDG-----RTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVF 193
           ACG  NS    G  G     R G ++ L  +T  V L S     S    H      G VF
Sbjct: 44  ACGD-NSCGQLGRRGVPHRKRPGLIQAL--ETLNVDLLSCGKEHSLAVCHK-----GRVF 95

Query: 194 IWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGE 253
            WG    +G LG G          K  +F P  V++   + +  ++CG  H+  +++ G+
Sbjct: 96  AWG-AGSEGQLGIG--------EFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQ 146

Query: 254 VFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           VFSWG    G+LG G +      P+ + +L+ I +  VA G  H+ A++LSG  + WG +
Sbjct: 147 VFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSN 206

Query: 313 NC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           N     L G+   +  + P+ + G L+ + V  +SCG  HTAV+T  G++FTFGD + G 
Sbjct: 207 NAGQLALSGNNVPVQSYKPRSI-GALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQ 265

Query: 372 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           LGHG       P+ V+ + GL + +  CG +HT   V
Sbjct: 266 LGHGPTAEKRGPQLVEGIDGLVS-QIDCGSYHTLVYV 301



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 110/243 (45%), Gaps = 19/243 (7%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ S G +   GD + G LG         P  + +L+ L     +
Sbjct: 20  GAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLS 79

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  V AL    
Sbjct: 80  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIK 127

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIAC 515
             QVSCGH  ++AL+  G V++ G+  +GQLG  K   + + P RV+  L    + ++A 
Sbjct: 128 IIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKS-LEGIPLAQVAA 186

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           G  H   L+     + WG    G+L   G+        P  + ALK+  V  I CG+  T
Sbjct: 187 GGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHT 246

Query: 573 AAI 575
           A +
Sbjct: 247 AVL 249


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 133/260 (51%), Gaps = 15/260 (5%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G +M    PK VE    + V +IACG  H+A +T  G V +WG+   GRLGHG   D   
Sbjct: 2   GNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 61

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PKL++AL       +ACG      + ++ D   W   + ++G LG G      LP K+  
Sbjct: 62  PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 121

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            L G+ V  V CG   +  +T +G ++T+G G F  LGHG    V  P++V +L+G + +
Sbjct: 122 -LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKII 180

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
             A G  H  A             CS SG+++TWGD D G+LG G   A   P  V AL 
Sbjct: 181 SIATGSLHCVA-------------CSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQ 227

Query: 455 EPNFCQVSCGHSLTVALTTT 474
             +  +V+CG + T+AL+T+
Sbjct: 228 GKHIVKVTCGSAHTLALSTS 247



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 130/258 (50%), Gaps = 17/258 (6%)

Query: 321 HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV 380
           HGN MS   PK L   L G+ V+ ++CG  H+A +T++G + T+G G +G LGHGD    
Sbjct: 1   HGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 59

Query: 381 STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGH 438
             P+ V++L G R +  ACG               + + C      +++WGDGD G+LG 
Sbjct: 60  LRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGDYGKLGR 107

Query: 439 GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KL 497
           G  +   +P  + +L      +V CG   +VALT +G VYT G   + +LG    +  + 
Sbjct: 108 GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR 167

Query: 498 PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
           P +V     K  +  IA G  H    +   EVYTWG    G+LG G      +P LV AL
Sbjct: 168 PKKVAALQGKKIIS-IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTAL 226

Query: 558 KDKQVKSIVCGTSFTAAI 575
           + K +  + CG++ T A+
Sbjct: 227 QGKHIVKVTCGSAHTLAL 244



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 122/261 (46%), Gaps = 17/261 (6%)

Query: 267 HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS 326
           HG       PKL++ L  ++V  +ACG  H+ A+T SG + TWG     +G LGHG+   
Sbjct: 1   HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR--YGRLGHGDSED 58

Query: 327 LWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 384
              PK +   L G     ++CG     T  +T    ++++GDG +G LG G       P 
Sbjct: 59  QLRPKLVEA-LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPY 117

Query: 385 EVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR 444
           +++SL GL  V+  CG   + A+ +            SG ++TWG GD  RLGHG  +  
Sbjct: 118 KIESLAGLGVVKVECGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHV 165

Query: 445 LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGK 504
             P  VAAL       ++ G    VA + +G VYT G    GQLGD         R+   
Sbjct: 166 RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTA 225

Query: 505 LTKNFVEEIACGDYHVAVLTS 525
           L    + ++ CG  H   L++
Sbjct: 226 LQGKHIVKVTCGSAHTLALST 246



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 10/100 (10%)

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V +IACG  H A +T+   V TWGKG  GRLGHGD++D+  P LVEAL   +   I CG+
Sbjct: 21  VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 80

Query: 570 SFTAAICL----HKWVSG------VDQSMCSGCRIPFNFK 599
                +C+    + W  G      + +    GC++P+  +
Sbjct: 81  GDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIE 120


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 170/337 (50%), Gaps = 25/337 (7%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+CG  H A+VT  G+++ +G    G+LG G  + V  P  + ALK    +L  CG +HT
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT 103

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G++Y  GG+  + G LG G+         ++       +  ++ G + +A VT 
Sbjct: 104 LVYTEKGNVYAAGGN--SEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTE 161

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            GQLF +GD + G +G  D+  VS P +VD  K + ++  +CG +H+A +          
Sbjct: 162 DGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSI--SCGYYHSAFIT--------- 210

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEAR--LVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                G+L+T+G+ + G+LG   ++ +   VP  V  ++E    +V+CG   TV LT TG
Sbjct: 211 ---GDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTETG 266

Query: 476 HVYTMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
            VYT G   YGQLG      K  +P  V+  L  + +  + CG+ H AV+     ++T+G
Sbjct: 267 -VYTFGLGQYGQLGHGTLLFKTSVPKSVK-HLRSHKIHNVTCGESHTAVIAENGLMFTFG 324

Query: 534 KGANGRLGHGDTDDRNF--PSLVEALKDKQVKSIVCG 568
            G +G+LG G+ +  N   P+L        V  + CG
Sbjct: 325 DGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 361



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 145/291 (49%), Gaps = 25/291 (8%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           ++CG+ HT  VT +G +Y +G +  ++G LG G++ ++  P  +   L+        CG 
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSN--DWGQLGLGSKNTVRKPTCVKA-LKPEKTKLAVCGR 100

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVV 408
            HT V T  G ++  G  + G LG GD    +T   +        ++  A G + +AAV 
Sbjct: 101 NHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVT 160

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
           E             G+LF WGD   G++G  DK    VP C   + +P    +SCG+  +
Sbjct: 161 E------------DGQLFVWGDNSEGQIGLADKTCVSVP-CQVDVGKP-VSSISCGYYHS 206

Query: 469 VALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             +T  G +YT G P  G+LG   +   N ++P  V G + K  V ++ACG  H  VLT 
Sbjct: 207 AFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEK--VNKVACGGEHTVVLT- 263

Query: 526 RTEVYTWGKGANGRLGHGDTDDR-NFPSLVEALKDKQVKSIVCGTSFTAAI 575
            T VYT+G G  G+LGHG    + + P  V+ L+  ++ ++ CG S TA I
Sbjct: 264 ETGVYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVI 314



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 32/266 (12%)

Query: 146 LSSGGSDGRTG-HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGIL 204
           L  G ++ RT  HL     +  ++   +A S +S     D     G +F+WG+       
Sbjct: 123 LGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTED-----GQLFVWGD------- 170

Query: 205 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 264
                 S    G+   + V    +  V   V +I+CG  H+A +T  GE++++GE   G+
Sbjct: 171 -----NSEGQIGLADKTCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGK 225

Query: 265 LG----HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 320
           LG       +S V  P ++  ++ +N   VACG  HT  +T +G +YT+G     +G LG
Sbjct: 226 LGLLPEQLKNSRVPQP-VLGIMEKVNK--VACGGEHTVVLTETG-VYTFGLG--QYGQLG 279

Query: 321 HGNEM-SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           HG  +    +PK +   L    + +V+CG  HTAV+   G +FTFGDG  G LG G+   
Sbjct: 280 HGTLLFKTSVPKSVK-HLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGKLGLGEENF 338

Query: 380 VST--PREVDSLKGLRTVRAACGVWH 403
            +   P    +      +  ACG  H
Sbjct: 339 ANQFDPALCSNFLSFTVLLVACGGCH 364


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 153/295 (51%), Gaps = 30/295 (10%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           VF+WG    D +        G   G K+   VP   E+   L+V  +A G +    VT +
Sbjct: 428 VFVWGLNDKDQL--------GGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE 477

Query: 252 GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYT 308
           G+V++ GE   GRLG G+ S  V  P+ I AL +  V+ VA   G  H  A+T+ G +++
Sbjct: 478 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 537

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG  +   G LGH + M+   P+ +   L+   +  ++CG  H+A +TS+G+L+T+G G 
Sbjct: 538 WGEGD--DGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 594

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSSSSNCSSGKLF 426
           +G LGHGD  +   P+ V  L G R ++ ACG     T A+ +             G +F
Sbjct: 595 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD------------EGLVF 642

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           +WGDGD G+LG G  E   +P  +  L     CQ+ CG   ++ALT +G V+T G
Sbjct: 643 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 697



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 148/293 (50%), Gaps = 22/293 (7%)

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           T + +VF WG     +LG    S +  P   + L  +NV  VA G     AVT+ G +Y 
Sbjct: 423 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 482

Query: 309 WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 365
            G      G LG G +  ++ +P+++   L    V  V+   G  H   +T  G++F++G
Sbjct: 483 CG--EATNGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 539

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           +G  G LGH  R++   PR +++LK  R    ACG  H+AA+             SSG+L
Sbjct: 540 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 587

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSP 483
           +TWG G+ GRLGHGD   +L P  V  L+     QV+CG   + T+ALT  G V++ G  
Sbjct: 588 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 647

Query: 484 VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            +G+LG   + G  +P  +E +L    V +I CG      LT    V+TWGKG
Sbjct: 648 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 699



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 127/246 (51%), Gaps = 28/246 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIAC--GGRHAAL 247
           G V+  GE T +G LG GI  SG+         +P+ + +     V+ +A   GGRHA  
Sbjct: 478 GKVYACGEAT-NGRLGLGI-SSGTVP-------IPRQITALSSYVVKKVAVHSGGRHATA 528

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +T  G+VFSWGE   G+LGH    +   P+LI+ALK   +  +ACG  H+ A+T SG++Y
Sbjct: 529 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 588

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
           TWG     +G LGHG+  +   PK +   L G  V  V+CG     T  +T  G +F++G
Sbjct: 589 TWGLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 645

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           DG FG LG G     + P+ ++ L G    +  CG   + A+ +            SG +
Sbjct: 646 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 693

Query: 426 FTWGDG 431
           +TWG G
Sbjct: 694 WTWGKG 699



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 135/280 (48%), Gaps = 16/280 (5%)

Query: 299 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
           A T+   ++ WG ++ +   LG      + +P   +  L  ++V  V+ G      VT  
Sbjct: 421 AATIRTKVFVWGLNDKD--QLGGLKGSKIKVPS-FSETLSALNVVQVAGGSKSLFAVTVE 477

Query: 359 GQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           G+++  G+ T G LG G    +V  PR++ +L      + A    H+        G  ++
Sbjct: 478 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV---HSG-------GRHAT 527

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
           +    GK+F+WG+GD G+LGH  +     P  + AL       ++CG S + ALT++G +
Sbjct: 528 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 587

Query: 478 YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKG 535
           YT G   YG+LG      +L  ++   L  + V ++ACG  D     LT    V++WG G
Sbjct: 588 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 647

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G+LG G ++  N P  +E L  + V  I CG  F+ A+
Sbjct: 648 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 687



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 407 VVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSC- 463
           VV+V  GS S    +  GK++  G+   GRLG G     + +P  + AL      +V+  
Sbjct: 461 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 520

Query: 464 -GHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
            G     ALT  G V++ G    G+LG   + N   P  +E   TK  + +IACG  H A
Sbjct: 521 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSHSA 579

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL---- 577
            LTS  E+YTWG G  GRLGHGD   +  P +V+ L   +V  + CG+     + L    
Sbjct: 580 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 639

Query: 578 --HKWVSG----VDQSMCSGCRIPFNFKR 600
               W  G    + +    GC IP N +R
Sbjct: 640 LVFSWGDGDFGKLGRGGSEGCNIPQNIER 668


>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
          Length = 355

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 169/330 (51%), Gaps = 24/330 (7%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G +++WG    G+LG G  +D S P++   + N      A G + T A+T  G ++T+G 
Sbjct: 14  GYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQ 73

Query: 312 SNCNFGLLGHGNE---MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            + N   LGHG+     +  LP+++    +G+ V + S    H A VT  G ++T+G GT
Sbjct: 74  GDSN--QLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTWGRGT 131

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           FG LGH +      P +V  L G+R V+ ACG  HT A+ +             G++F W
Sbjct: 132 FGRLGH-EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTD------------DGRVFAW 178

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G+   G +G  D+     P  + +L       +S G   + AL+    VYT G+  YGQL
Sbjct: 179 GNNKTGCVGVSDR-GTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQL 237

Query: 489 GDPKANGKL--PTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           G  +    +  PTR+  +  +N  + +IACG YH+  L++  EVY WG+G  G+  +   
Sbjct: 238 GLGQGARYISQPTRI--RTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEKK 295

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            D N P +++ALK+ +VK I  G S +A +
Sbjct: 296 VDTNIPHVIDALKESRVKMIAAGGSHSAVV 325



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 150/290 (51%), Gaps = 26/290 (8%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSH---PKLI-DALKNINVELVACGEHHTCAVTLSGDMY 307
           G ++++G+    +LGHG   D S+   P+ + DA   ++V   +  + H  AVT  G ++
Sbjct: 66  GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           TWG     FG LGH       +P+K+ G L+G+    V+CG  HT  +T  G++F +G+ 
Sbjct: 126 TWG--RGTFGRLGH-EVHETGIPEKVPG-LDGMRFVKVACGHVHTLALTDDGRVFAWGNN 181

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G +G  DR     P+E++SL+G + +  + G+             SS++  +  +++T
Sbjct: 182 KTGCVGVSDR-GTCAPQEIESLRGKKIIDISAGM------------ESSAALSAEHEVYT 228

Query: 428 WGDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           WG  + G+LG G + AR +  PT +  L      Q++CG    +AL+  G VY  G  + 
Sbjct: 229 WGADNYGQLGLG-QGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQ 287

Query: 486 GQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           GQ   + K +  +P  ++  L ++ V+ IA G  H AV+  +  ++T G+
Sbjct: 288 GQTANEKKVDTNIPHVID-ALKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 129/264 (48%), Gaps = 19/264 (7%)

Query: 220 DSFVPKAVESAVV-LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           +  +P+ VE A   L V N +    H A VT+ G V++WG    GRLGH V  +   P+ 
Sbjct: 89  NQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTWGRGTFGRLGHEV-HETGIPEK 147

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           +  L  +    VACG  HT A+T  G ++ WG  N   G +G  +  +   P+++   L 
Sbjct: 148 VPGLDGMRFVKVACGHVHTLALTDDGRVFAWG--NNKTGCVGVSDRGTC-APQEIE-SLR 203

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRA 397
           G  +  +S G   +A +++  +++T+G   +G LG G     +S P  + +L+ +  V+ 
Sbjct: 204 GKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQGARYISQPTRIRTLRNVPIVQI 263

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           ACG +H  A+             ++G+++ WG G +G+  +  K    +P  + AL E  
Sbjct: 264 ACGQYHMLAL------------SAAGEVYAWGQGLQGQTANEKKVDTNIPHVIDALKESR 311

Query: 458 FCQVSCGHSLTVALTTTGHVYTMG 481
              ++ G S +  +   G ++T+G
Sbjct: 312 VKMIAAGGSHSAVVDDKGRLFTVG 335



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 21/181 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG            +++G        +  P+ +ES     + +I+ G   +A ++
Sbjct: 173 GRVFAWGN-----------NKTGCVGVSDRGTCAPQEIESLRGKKIIDISAGMESSAALS 221

Query: 250 KQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            + EV++WG +  G+LG G  +  +S P  I  L+N+ +  +ACG++H  A++ +G++Y 
Sbjct: 222 AEHEVYTWGADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYA 281

Query: 309 WGGSNCNFGLLGH-GNE--MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           WG      GL G   NE  +   +P  ++  L+   V  ++ G  H+AVV   G+LFT G
Sbjct: 282 WG-----QGLQGQTANEKKVDTNIPHVID-ALKESRVKMIAAGGSHSAVVDDKGRLFTVG 335

Query: 366 D 366
           +
Sbjct: 336 E 336


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 167/360 (46%), Gaps = 29/360 (8%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG    DG LG G+ ++          F P+         ++ + CGG+H+  +   G V
Sbjct: 4   WGNAK-DGQLGIGVEKN--------PVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSV 54

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 314
           ++ G    G+LGH  D     P+++ AL    + +V+CG  H+ AV   G ++ WG  + 
Sbjct: 55  YTCGSNSCGQLGH--DKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDG 112

Query: 315 NFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
             G LG G  E ++ +P+ L   L    +S V CG  H   ++  GQLFT+G  T G LG
Sbjct: 113 --GQLGLGTTETTVRIPR-LVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLG 169

Query: 374 HGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G    S   P  + SL G+   +   G            G  S +   SG +F WG   
Sbjct: 170 LGKGEPSKLFPHPLKSLAGIPLAQITAG------------GDHSFALSLSGAVFGWGKNR 217

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG  DK+ R VP  +  L       +SCG   T ALT  G ++T G   +GQLG   
Sbjct: 218 AGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGS 277

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            N +L  R   +L    V +IACG +H +A + S   VY +G  ++G+LG G   D   P
Sbjct: 278 TNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGILGDARSP 337



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 154/326 (47%), Gaps = 22/326 (6%)

Query: 254 VFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           +  WG    G+LG GV+ + V  P+         ++ V CG  H+  +   G +YT G +
Sbjct: 1   MLCWGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSN 60

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
           +C  G LGH       +  ++ G L+   ++ VSCG  H+  V   GQLF +G G  G L
Sbjct: 61  SC--GQLGHDKA---GISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQL 115

Query: 373 GHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           G G    +V  PR V  L   R  +  CG  H  A+               G+LFTWG  
Sbjct: 116 GLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVAL------------SRDGQLFTWGQN 163

Query: 432 DRGRLGHGDKE-ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG- 489
             G+LG G  E ++L P  + +L      Q++ G   + AL+ +G V+  G    GQLG 
Sbjct: 164 TSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGL 223

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
           + K +  +P  ++   ++  V  I+CGD H A LT    ++T+G G+ G+LGHG T+   
Sbjct: 224 NDKQDRAVPCHIKFLRSQKVVY-ISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSEL 282

Query: 550 FPSLVEALKDKQVKSIVCGTSFTAAI 575
            P  V  L   +V  I CG   T A 
Sbjct: 283 LPRRVLELMGTEVSQIACGRHHTLAF 308


>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
 gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
          Length = 489

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 172/367 (46%), Gaps = 50/367 (13%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVA 291
             +QN  C  +   L+       SWG    G+LG+G ++  +S P  +  L + ++  V 
Sbjct: 84  FKLQNAECDAKQQKLL------LSWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVN 137

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS----LWLPKKLNGPLEGIHVSSVSC 347
                + AVT  G +YTWG +    G L     +S    L LP  +  P   +    V+C
Sbjct: 138 ASGDISAAVTSQGQIYTWGKTRG--GSLSQQKSLSRATNLLLPTLIVAP--EVQFVQVAC 193

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST------PREV----------DSLKG 391
           G  H A VT  G+L T+G+   G LGH  ++   +      PR             +L+ 
Sbjct: 194 GKTHLAGVTKDGKLITWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALES 253

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
            + ++A+CG  HTA + +             G+++TWG G  G LGHG+ +   +P  V 
Sbjct: 254 KKIIQASCGFQHTACLTQ------------DGEVYTWGFGKNGALGHGNWDQVDLPKKVE 301

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN---GKLPTRVEGKLTKN 508
            L   N  ++ CG   T AL   G++Y+ GS  YGQLG  ++N     +P +++     +
Sbjct: 302 GL--SNIVKIDCGMDYTFALDKDGNIYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSS 359

Query: 509 FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
            V +I+CG+ H A L  + E + WG G +G+LGH +  + N P  +E  +   ++ +VCG
Sbjct: 360 HVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEKTNLNQPKKLEFTEP--LRRVVCG 417

Query: 569 TSFTAAI 575
              T  I
Sbjct: 418 GGHTGVI 424



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 162/354 (45%), Gaps = 55/354 (15%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD----SDVSHPKL 278
           +P  V+     D+  +   G  +A VT QG++++WG+  GG L         +++  P L
Sbjct: 121 IPSPVQVLSDEDIIQVNASGDISAAVTSQGQIYTWGKTRGGSLSQQKSLSRATNLLLPTL 180

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL------WLPKK 332
           I A   +    VACG+ H   VT  G + TWG  N + G LGH  ++        + P+ 
Sbjct: 181 IVA-PEVQFVQVACGKTHLAGVTKDGKLITWG--NPDQGKLGHNAQLQQESKNKSYSPRS 237

Query: 333 ---------LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 383
                    + G LE   +   SCG  HTA +T  G+++T+G G  G LGHG+   V  P
Sbjct: 238 YADYNAINFVGGALESKKIIQASCGFQHTACLTQDGEVYTWGFGKNGALGHGNWDQVDLP 297

Query: 384 REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG--HGDK 441
           ++V+ L  +  V+  CG+ +T A+ +             G +++WG    G+LG    + 
Sbjct: 298 KKVEGLSNI--VKIDCGMDYTFALDK------------DGNIYSWGSNRYGQLGTTQSNI 343

Query: 442 EARLVPTCVAALVEP----NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGK 496
               VP     L  P    +   +SCG   +  L   G  +  G    GQLG   K N  
Sbjct: 344 NKHNVPI---QLQLPHGSSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEKTNLN 400

Query: 497 LPTRVEGKLTKNFVE---EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            P ++E      F E    + CG  H  V+T+  +++ +G+G +G+LG GD ++
Sbjct: 401 QPKKLE------FTEPLRRVVCGGGHTGVITTAGKLFLFGRGRDGQLGRGDVNE 448



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 33/266 (12%)

Query: 213 SYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
           SYA     +FV  A+ES  ++     +CG +H A +T+ GEV++WG    G LGHG    
Sbjct: 237 SYADYNAINFVGGALESKKIIQA---SCGFQHTACLTQDGEVYTWGFGKNGALGHGNWDQ 293

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG--HGNEMSLWLP 330
           V  PK ++ L NI    + CG  +T A+   G++Y+WG +   +G LG    N     +P
Sbjct: 294 VDLPKKVEGLSNI--VKIDCGMDYTFALDKDGNIYSWGSNR--YGQLGTTQSNINKHNVP 349

Query: 331 KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK 390
            +L  P    HV  +SCG  H+A +   G+ F +G G  G LGH ++ +++ P++++  +
Sbjct: 350 IQLQLPHGSSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEKTNLNQPKKLEFTE 409

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
            LR  R  CG  HT  +             ++GKLF +G G  G+LG GD     V   +
Sbjct: 410 PLR--RVVCGGGHTGVIT------------TAGKLFLFGRGRDGQLGRGD-----VNESM 450

Query: 451 AAL-VEP----NFCQVSCGHSLTVAL 471
           AA  +EP    N  Q      L +AL
Sbjct: 451 AAFRIEPKEVVNISQTLKAEVLEIAL 476


>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
           trifallax]
          Length = 546

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 153/291 (52%), Gaps = 28/291 (9%)

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           G  H   +T  G+VFS+G  + G+LGHG  + ++ PK ++AL    V  V C  +HT   
Sbjct: 74  GCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYHT-IF 132

Query: 301 TLSGDMYTWGGSNCNFGLLGHGN---EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           + + +M  +     ++G LG GN   + S  L + LNG      + S+ CG +H+ V + 
Sbjct: 133 SCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGK----RIVSIGCGQYHSVVSSI 188

Query: 358 AGQLFTFGDGTFGVLG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            G++F+FG    G LG  G   ++S P+EV   K L++ + ACG +HT A+         
Sbjct: 189 DGEIFSFGRNDSGQLGITGSDGNISLPKEV---KNLKSTQIACGYYHTVAI--------- 236

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEAR-LVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
               ++G+L++WG  D G+LG G   A+ ++PT V  L +     V+CG   T+AL   G
Sbjct: 237 ----NNGQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAG 292

Query: 476 HVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            +++ G   +GQLGD   N    P  ++G + K  V +IA G YH  VL +
Sbjct: 293 QLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKK-VCQIAAGFYHSIVLAN 342



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 149/305 (48%), Gaps = 31/305 (10%)

Query: 285 INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMS------------LWLPK 331
           +NV  VA G  HT  +T  GD+Y+ GG N     L  G N MS            L L +
Sbjct: 1   MNVIQVAAGNEHTLILTDCGDVYS-GGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVE 59

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
           KL G  + I     S G  H   +T+ G++F+FG    G LGHGD+ S+++P++V++L  
Sbjct: 60  KLRG--KNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSR 117

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
                  C  +HT             S     ++++ G  D G+LG G+ + +  PT + 
Sbjct: 118 KFVTAVGCSYYHTIF-----------SCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIE 166

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE 511
           AL       + CG   +V  +  G +++ G    GQLG   ++G +    E K  K+   
Sbjct: 167 ALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKS--T 224

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN-FPSLVEALKDKQVKSIVCGTS 570
           +IACG YH  V  +  ++Y+WGK  +G+LG G    +   P+LV  L+D+++ S+ CG  
Sbjct: 225 QIACGYYH-TVAINNGQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCY 283

Query: 571 FTAAI 575
            T A+
Sbjct: 284 HTLAL 288



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 180/362 (49%), Gaps = 39/362 (10%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWG-EELGGRLGHGVD----------SDVSHPKLIDA 281
           ++V  +A G  H  ++T  G+V+S G  E+G  L  G +          +     KL++ 
Sbjct: 1   MNVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEK 60

Query: 282 L--KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
           L  KNI     + G  H  A+T +G ++++G  N   G LGHG++ S+  PK++   L  
Sbjct: 61  LRGKNIVKIFASNGCEHVIALTNNGKVFSFG-FNVK-GQLGHGDQTSINSPKQVEA-LSR 117

Query: 340 IHVSSVSCGPWHTAV-VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
             V++V C  +HT        ++++ G   +G LG G+    ++P  +++L G R V   
Sbjct: 118 KFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIG 177

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPN 457
           CG +H+           SS +   G++F++G  D G+LG    +  + +P  V  L    
Sbjct: 178 CGQYHSVV---------SSID---GEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKST- 224

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIAC 515
             Q++CG+  TVA+   G +Y+ G    GQLG    + K  LPT V   L    +  +AC
Sbjct: 225 --QIACGYYHTVAINN-GQLYSWGKNDSGQLGIGIYSAKEILPTLVR-DLEDQEIVSVAC 280

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G YH   L    +++++G+ ++G+LG G T++   P L++ L DK+V  I  G  F  +I
Sbjct: 281 GCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAG--FYHSI 338

Query: 576 CL 577
            L
Sbjct: 339 VL 340



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 7/185 (3%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPKLIDAL 282
           P  +E+     + +I CG  H+ + +  GE+FS+G    G+LG  G D ++S PK    +
Sbjct: 162 PTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPK---EV 218

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           KN+    +ACG +HT A+  +G +Y+WG ++   G LG G   +  +   L   LE   +
Sbjct: 219 KNLKSTQIACGYYHTVAIN-NGQLYSWGKNDS--GQLGIGIYSAKEILPTLVRDLEDQEI 275

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
            SV+CG +HT  +  AGQLF+FG  + G LG G   +   P  +  L   +  + A G +
Sbjct: 276 VSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFY 335

Query: 403 HTAAV 407
           H+  +
Sbjct: 336 HSIVL 340


>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cavia porcellus]
          Length = 780

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 171/337 (50%), Gaps = 25/337 (7%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  SDV  P  + ALK   V+  ACG +HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
             +T+ G++Y  GG+  N G LG G+        +++      ++  +S G   +A ++ 
Sbjct: 100 LILTVVGNVYAAGGN--NEGQLGLGDTEERNTFHRISFFTSEHNIKQLSAGSNTSAALSE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  D ISV  P +V+  K +  +  +CG +H+A V          
Sbjct: 158 DGRLFMWGDNSEGQIGLNDVISVCVPHQVNIGKPISWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARL---VPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                G+L+T+G+ + G+LG   KE  +    P  VA + E    QV+CG   TV LT  
Sbjct: 207 ---MDGELYTFGEPESGKLGL-PKELLINHRTPQLVAGIPE-KVIQVACGGGHTVVLTEK 261

Query: 475 GHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
             VYT G   +GQLG        L  +V  ++    +  I+CG+ H A+++    +YT+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFCFETLEPKVIEQIKNQKITYISCGENHTALISDIGLMYTFG 320

Query: 534 KGANGRLGHG--DTDDRNFPSLVEALKDKQVKSIVCG 568
            G +G+LG G  +  ++ FP L        V+ + CG
Sbjct: 321 DGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVACG 357



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 27/317 (8%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G K D   P  V++     VQ  ACG  H  ++T  G V++ G    G+LG G   + + 
Sbjct: 70  GSKSDVKKPTCVKALKPEKVQFAACGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNT 129

Query: 276 PKLIDALKNI-NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
              I    +  N++ ++ G + + A++  G ++ WG +  + G +G  + +S+ +P ++N
Sbjct: 130 FHRISFFTSEHNIKQLSAGSNTSAALSEDGRLFMWGDN--SEGQIGLNDVISVCVPHQVN 187

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGL 392
               G  +S +SCG +H+A VT  G+L+TFG+   G LG    + ++  TP+ V  +   
Sbjct: 188 I---GKPISWISCGYYHSAFVTMDGELYTFGEPESGKLGLPKELLINHRTPQLVAGIPE- 243

Query: 393 RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVA 451
           + ++ ACG  HT  + E  V             +T+G G  G+LG G      L P  + 
Sbjct: 244 KVIQVACGGGHTVVLTEKAV-------------YTFGLGQFGQLGLGTFCFETLEPKVIE 290

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKN 508
            +       +SCG + T  ++  G +YT G   +G+LG   +  +N   P     +  + 
Sbjct: 291 QIKNQKITYISCGENHTALISDIGLMYTFGDGRHGKLGLGLENFSNQFFPILC-SEFLRF 349

Query: 509 FVEEIACGDYHVAVLTS 525
            V+ +ACG     V  +
Sbjct: 350 TVQLVACGGCQTLVFAA 366



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G   D   P+ V+ALK ++V+   CG + T
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNHT 99

Query: 573 AAICL 577
             + +
Sbjct: 100 LILTV 104


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 160/321 (49%), Gaps = 46/321 (14%)

Query: 252 GEVFSWGEELGGRLG--------------HGVDSD--------VSHPKLIDALKNINVEL 289
           G+++SWG    G+                  VD D        +  P LI   + + V +
Sbjct: 85  GQLYSWGYNFYGQCALDNNHNHNNNNNNKQTVDEDDDDSNFNIIKLPTLIK--QGLIVSM 142

Query: 290 VACGEHHTCAVTLSGD--MYTWGGSNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           +ACG+ H  AV L  D  + +WG   CN +G LG G++++   P  ++G  + I V  V+
Sbjct: 143 IACGDSHALAV-LPNDATVLSWG---CNRWGQLGLGDQVNRCHPTPISGLSQSIPVF-VA 197

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            G  H+ V++  G+LF+FG GTFG LGHG+ +    PR + +L G   V  A G+ H+AA
Sbjct: 198 AGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKHIVSVAAGLMHSAA 257

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
           V             S G L+TWG    G+LG G  +   +P     L   N  +V CG +
Sbjct: 258 V------------DSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVCGKN 305

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKN-FVEEIACGDYHVAVLT 524
            T+ L   GHVY+ G  V GQLG       + P R++  L +N  + +IA G YHV +LT
Sbjct: 306 HTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLT 365

Query: 525 SRTEVYTWGKGANGRLGHGDT 545
            +  VY++G  ++G LG GD 
Sbjct: 366 KKGCVYSFGYISDGALGLGDV 386



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 170/382 (44%), Gaps = 68/382 (17%)

Query: 223 VPKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           +P  ++  ++  V  IACG  HA A++     V SWG    G+LG G   +  HP  I  
Sbjct: 130 LPTLIKQGLI--VSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISG 187

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGI 340
           L       VA G  H+  ++  G+++++G   C  FG LGHGNE+  + P+ ++  L G 
Sbjct: 188 LSQSIPVFVAAGSQHSFVLSKFGELFSFG---CGTFGRLGHGNELPSFNPRPIS-TLVGK 243

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
           H+ SV+ G  H+A V S G L+T+G   +G LG G     + P +   L+    V+  CG
Sbjct: 244 HIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVCG 303

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN--F 458
             HT  V++V           +G ++++G    G+LG G     + P  +   ++ N   
Sbjct: 304 KNHTL-VLDV-----------NGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEI 351

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---------DPKA---------------- 493
             ++ G+   + LT  G VY+ G    G LG          PK                 
Sbjct: 352 IDIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDS 411

Query: 494 -------------------NGKLPTRVEGKLTK--NFVEEIACGDYHVAVLTSRTEVYTW 532
                              N KLP +V     +  +   +IA G +H A++TS   +YT+
Sbjct: 412 YKEIYGEYNSDSENDINNNNAKLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTF 471

Query: 533 GKGANGRLGHGDTDDRNFPSLV 554
           G G N RLG+   +D++ P +V
Sbjct: 472 GLGDNFRLGNNCQEDQDMPCIV 493



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 136/309 (44%), Gaps = 71/309 (22%)

Query: 189 LGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
            G++F +G C   G LG          G ++ SF P+ + + V   + ++A G  H+A V
Sbjct: 209 FGELFSFG-CGTFGRLG---------HGNELPSFNPRPISTLVGKHIVSVAAGLMHSAAV 258

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
             QG +++WG    G+LG G     + P     L+  N+  V CG++HT  + ++G +Y+
Sbjct: 259 DSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNGHVYS 318

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPL-EGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +G + C  G LG G+      P +++  L +   +  ++ G +H  ++T  G +++FG  
Sbjct: 319 FGFNVC--GQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYI 376

Query: 368 TFGVLGHGDRIS-VSTPR-------------EVDSLK----------------------- 390
           + G LG GD +   S P+              +DS K                       
Sbjct: 377 SDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKEIYGEYNSDSENDINNNNAKLPP 436

Query: 391 ---------GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
                    G   V+ A G WH+A +             SSG+L+T+G GD  RLG+  +
Sbjct: 437 KVVELHNEIGDVAVKIAAGGWHSAIIT------------SSGRLYTFGLGDNFRLGNNCQ 484

Query: 442 EARLVPTCV 450
           E + +P  V
Sbjct: 485 EDQDMPCIV 493



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 14/230 (6%)

Query: 338 EGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
           +G+ VS ++CG  H  AV+ +   + ++G   +G LG GD+++   P  +  L     V 
Sbjct: 136 QGLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVF 195

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
            A G  H+  + +             G+LF++G G  GRLGHG++     P  ++ LV  
Sbjct: 196 VAAGSQHSFVLSKF------------GELFSFGCGTFGRLGHGNELPSFNPRPISTLVGK 243

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
           +   V+ G   + A+ + G +YT G   YGQLG              +L +  + ++ CG
Sbjct: 244 HIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVCG 303

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
             H  VL     VY++G    G+LG G   D   P+ ++ L  KQ   I+
Sbjct: 304 KNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRID-LDLKQNDEII 352



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 11/200 (5%)

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
           +GL     ACG  H  AV+            +   + +WG    G+LG GD+  R  PT 
Sbjct: 136 QGLIVSMIACGDSHALAVLP-----------NDATVLSWGCNRWGQLGLGDQVNRCHPTP 184

Query: 450 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF 509
           ++ L +     V+ G   +  L+  G +++ G   +G+LG          R    L    
Sbjct: 185 ISGLSQSIPVFVAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKH 244

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           +  +A G  H A + S+  +YTWG    G+LG G       P+  + L+   +  +VCG 
Sbjct: 245 IVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVCGK 304

Query: 570 SFTAAICLHKWVSGVDQSMC 589
           + T  + ++  V     ++C
Sbjct: 305 NHTLVLDVNGHVYSFGFNVC 324


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 157/324 (48%), Gaps = 20/324 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ +ACGG+H   + + G V++ G    G+LGH  D   + P+L+ AL    + +V+CG 
Sbjct: 35  LKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGH--DKAGNSPELVGALDTQKITMVSCGR 92

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ AV   G ++ WG G     GL     E ++ +P+ L   L    +S V CG  H  
Sbjct: 93  AHSVAVNEQGQVFVWGAGDGGQLGL--ETAETAVRIPRLLK-KLCDHSISQVVCGNQHCI 149

Query: 354 VVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            ++  GQLFT+G  + G LG G    S  +P  V SL G+   +   G  H  A+     
Sbjct: 150 ALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFAL----- 204

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                    SG +F WG    G+LG  DK+ R VP  +  L       +SCG   T ALT
Sbjct: 205 -------SLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALT 257

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            +G ++T G    GQLG   +N +L  R   +L    V +I CG +H +A + S   VY 
Sbjct: 258 KSGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYA 317

Query: 532 WGKGANGRLGHGDTDDRNFPSLVE 555
           +G  ++G+LG G   D   P  V+
Sbjct: 318 FGCNSHGQLGTGILADLRSPHPVK 341



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 155/329 (47%), Gaps = 28/329 (8%)

Query: 254 VFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           +  WG    G+LG GV+ + V  P++        ++ VACG  HT  +   G +YT G +
Sbjct: 1   MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSN 60

Query: 313 NCNFGLLGH---GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           +C  G LGH   GN        +L G L+   ++ VSCG  H+  V   GQ+F +G G  
Sbjct: 61  SC--GQLGHDKAGNS------PELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDG 112

Query: 370 GVLG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG      +V  PR +  L      +  CG  H  A+               G+LFTW
Sbjct: 113 GQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIAL------------SRDGQLFTW 160

Query: 429 GDGDRGRLGHGDKE-ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           G    G+LG G  E ++L P+ V +L      Q++ G     AL+ +G V+  G    GQ
Sbjct: 161 GQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQ 220

Query: 488 LG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG + K +  +P  ++  L    V  I+CGD H A LT    ++T+G G+ G+LGHG ++
Sbjct: 221 LGLNDKQDRAVPCHIKF-LRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSN 279

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +   P  V  L   +V  I CG   T A 
Sbjct: 280 NELLPRRVMELMGTEVSQITCGRHHTLAF 308


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 163/323 (50%), Gaps = 25/323 (7%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           LD  +IACG     +V++ G +F+ G+   G LG G   DV+ P+ I  L  + V  VA 
Sbjct: 157 LDPSDIACGYDSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAI 216

Query: 293 --GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
             G  H  A+T  G +Y+WG  +   G LGHGN +  +L   L   L+   V+ ++CG  
Sbjct: 217 HPGGRHAMALTAEGKVYSWGCGD--RGQLGHGNTLG-YLDPTLIDELKSKEVTKIACGAM 273

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           H+  V S G++F++GDG+ G LGHG+ ++   P+++ SL G   +  ACG  +T AV   
Sbjct: 274 HSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAV--- 330

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
                     +   +++WG G  G LG+G +  +  +PT + AL       V+CG++ + 
Sbjct: 331 ----------AGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNVACGYATSF 380

Query: 470 ALTTTGHVYTMGSPVYGQLGDPKANGKL---PTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           A++  G V+  GS    +LG    N K+   P  ++G L    ++ +    +H   +   
Sbjct: 381 AVSANGKVWAWGSGDRFRLG--LGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDEN 438

Query: 527 TEVYTWGKGANGRLGHGDTDDRN 549
            +VY WG    G +G+ D D + 
Sbjct: 439 GQVYIWGSQEIGPVGN-DEDAKQ 460



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 158/313 (50%), Gaps = 29/313 (9%)

Query: 220 DSFVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           D  VP+ +   + + V  +A   GGRHA  +T +G+V+SWG    G+LGHG       P 
Sbjct: 196 DVNVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLGHGNTLGYLDPT 255

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGP 336
           LID LK+  V  +ACG  H+ AV   G +++WG GSN   G LGHGN ++  LPKK+   
Sbjct: 256 LIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSN---GALGHGNNLAQLLPKKIMS- 311

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSL--KGLR 393
           L G H+ +V+CG  +T +  +   ++++G G  G LG+G  + S   P ++++L  KG+ 
Sbjct: 312 LNGKHIMAVACGECYT-IAVAGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGIT 370

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA- 452
            V  ACG             ++S +  ++GK++ WG GDR RLG G+++  + P  +   
Sbjct: 371 NV--ACGY------------ATSFAVSANGKVWAWGSGDRFRLGLGNEKVIVKPREIQGD 416

Query: 453 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF 509
           L      +V       +A+   G VY  GS   G +G   D K    + +         F
Sbjct: 417 LKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVGNDEDAKQQQCMLSYAATASVIFF 476

Query: 510 VEEIACGDYHVAV 522
             +     YHVAV
Sbjct: 477 TRDDKEKHYHVAV 489



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 160/328 (48%), Gaps = 23/328 (7%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV+ WG +    L    + +   P     L+N++   +ACG      V+ +G ++  G  
Sbjct: 126 EVYVWGSKRNLLLAAD-EKNPLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGIFACGKG 184

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFG 370
             + G LG GN   + +P+++   L  + V++V+  P   H   +T+ G+++++G G  G
Sbjct: 185 --HMGCLGLGNCDDVNVPRQIPQLLP-VMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRG 241

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LGHG+ +    P  +D LK     + ACG  H+ AV+            S GK+F+WGD
Sbjct: 242 QLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVL------------SDGKIFSWGD 289

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
           G  G LGHG+  A+L+P  + +L   +   V+CG   T+A+     V++ G    G+LG 
Sbjct: 290 GSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGD-DVWSWGLGGNGELGY 348

Query: 491 --PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
                +  +PT++E    K  +  +ACG      +++  +V+ WG G   RLG G+    
Sbjct: 349 GVEMPSYYMPTKIEALFFKG-ITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVI 407

Query: 549 NFPSLVEA-LKDKQVKSIVCGTSFTAAI 575
             P  ++  LK K++K +V       AI
Sbjct: 408 VKPREIQGDLKGKKIKRVVASLFHALAI 435



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 20/283 (7%)

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           ++Y WG       LL   +E +   P K +  LE +  S ++CG     VV+  G +F  
Sbjct: 126 EVYVWGSKR---NLLLAADEKNPLEPDK-SKLLENLDPSDIACGYDSLFVVSRNGGIFAC 181

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G G  G LG G+   V+ PR++  L  +     A    H         G  + +  + GK
Sbjct: 182 GKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAI---HPG-------GRHAMALTAEGK 231

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           +++WG GDRG+LGHG+    L PT +  L      +++CG   ++A+ + G +++ G   
Sbjct: 232 VYSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGS 291

Query: 485 YGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD-YHVAVLTSRTEVYTWGKGANGRLGHG 543
            G LG      +L  +    L    +  +ACG+ Y +AV  +  +V++WG G NG LG+G
Sbjct: 292 NGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAV--AGDDVWSWGLGGNGELGYG 349

Query: 544 -DTDDRNFPSLVEALKDKQVKSIVCG--TSFTAAICLHKWVSG 583
            +      P+ +EAL  K + ++ CG  TSF  +     W  G
Sbjct: 350 VEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWG 392



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 5/179 (2%)

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYT 479
           +G +F  G G  G LG G+ +   VP  +  L+      V+   G    +ALT  G VY+
Sbjct: 175 NGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYS 234

Query: 480 MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            G    GQLG     G L   +  +L    V +IACG  H   + S  ++++WG G+NG 
Sbjct: 235 WGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGA 294

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC---LHKWVSGVDQSMCSGCRIP 595
           LGHG+   +  P  + +L  K + ++ CG  +T A+    +  W  G +  +  G  +P
Sbjct: 295 LGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGDDVWSWGLGGNGELGYGVEMP 353


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 160/353 (45%), Gaps = 69/353 (19%)

Query: 275 HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
           HP  ID L+N  +  VA G+ HT AV + G++Y+WG S C  G LG  +     LP  + 
Sbjct: 13  HPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASAC--GQLGLASMKD--LPTDVE 68

Query: 335 GP-----------LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV--- 380
           G            L+ + V  ++CG  HT  +T  G+L+++G G  G LGH D  ++   
Sbjct: 69  GYPYQPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKD 128

Query: 381 -------STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
                    P+ +  LK L   + ACG  HT AV+            ++G L++WG G  
Sbjct: 129 EDGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVL------------NNGHLYSWGAGAC 176

Query: 434 GRLGHGDKEA----------RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           G+LGH D  +          + +P CV AL        SCG   T+ LT  G +Y  G  
Sbjct: 177 GQLGHPDTSSFPADEDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGG 236

Query: 484 VYGQLG-----------DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             GQLG           D      +P ++E  L   F+  ++CGD H   L+    VY W
Sbjct: 237 SCGQLGFGNISQMPLDVDSCPFMPVPKKIES-LQGIFIVSLSCGDSHSMALSREGHVYAW 295

Query: 533 GKGANGRLGHGDTDD----------RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G+   G+LG  D  D          + FP  V AL +K++ +I CG + T A+
Sbjct: 296 GEATYGQLGLDDIRDLPKNTDNKPYQPFPQKVVALMNKKIVAISCGETHTLAL 348



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 149/309 (48%), Gaps = 61/309 (19%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-------- 275
           P+ +E    + V  IACG  H   +T+ G+++SWG    G+LGH   S +          
Sbjct: 76  PRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQ 135

Query: 276 --PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL------ 327
             PKLI  LKN+ V+ VACG+ HT AV  +G +Y+WG   C  G LGH +  S       
Sbjct: 136 PKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGAC--GQLGHPDTSSFPADEDG 193

Query: 328 ----WLPKKLNG--PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-- 379
                +P+ +    P + IH    SCG  HT V+T  G+++ FG G+ G LG G+ IS  
Sbjct: 194 YPYQPIPRCVTALKPFKLIH---ASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGN-ISQM 249

Query: 380 ---------VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
                    +  P++++SL+G+  V  +CG  H+ A+               G ++ WG+
Sbjct: 250 PLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMAL------------SREGHVYAWGE 297

Query: 431 GDRGRLGHGD----------KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
              G+LG  D          K  +  P  V AL+      +SCG + T+ALT  GH+Y+ 
Sbjct: 298 ATYGQLGLDDIRDLPKNTDNKPYQPFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSF 357

Query: 481 GSPVYGQLG 489
           G    GQLG
Sbjct: 358 GGNTCGQLG 366



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 166/371 (44%), Gaps = 63/371 (16%)

Query: 222 FVPKAVESAVVLD--VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV------ 273
           F P  +E  ++ +  +  +A G  H   V  +G V+SWG    G+LG     D+      
Sbjct: 10  FQPHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEG 69

Query: 274 ----SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW------GGSNCNFGLLGHGN 323
                 P++I+ L+++ V  +ACG+ HT A+T  G +Y+W         + +   +    
Sbjct: 70  YPYQPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDE 129

Query: 324 EMSLWLPK-KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV-- 380
           +   + PK KL   L+ + V  V+CG  HT  V + G L+++G G  G LGH D  S   
Sbjct: 130 DGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPA 189

Query: 381 --------STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
                     PR V +LK  + + A+CG  HT  + +             G+++ +G G 
Sbjct: 190 DEDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTD------------QGEIYCFGGGS 237

Query: 433 RGRLGHGD-KEARL---------VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
            G+LG G+  +  L         VP  + +L       +SCG S ++AL+  GHVY  G 
Sbjct: 238 CGQLGFGNISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGE 297

Query: 483 PVYGQLG-----------DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
             YGQLG           D K     P +V   + K  V  I+CG+ H   LT    +Y+
Sbjct: 298 ATYGQLGLDDIRDLPKNTDNKPYQPFPQKVVALMNKKIV-AISCGETHTLALTEGGHLYS 356

Query: 532 WGKGANGRLGH 542
           +G    G+LG 
Sbjct: 357 FGGNTCGQLGQ 367



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 79/162 (48%), Gaps = 26/162 (16%)

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEG--- 503
           P  +  L      QV+ G   TVA+   G+VY+ G+   GQLG   +   LPT VEG   
Sbjct: 14  PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLG-LASMKDLPTDVEGYPY 72

Query: 504 KLTKNFVE--------EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT----DDRN-- 549
           + T   +E        +IACGD H   LT   ++Y+WG G  G+LGH DT     D +  
Sbjct: 73  QPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGC 132

Query: 550 ----FPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
                P L+  LK+ +VK + CG + T A+     L+ W +G
Sbjct: 133 PYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAG 174


>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
           purpuratus]
          Length = 946

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 152/315 (48%), Gaps = 35/315 (11%)

Query: 285 INVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           + +  VA    H   VT    +Y+WG GS    G LGHG+     +P  +   L+G  ++
Sbjct: 77  LKIRQVAVSRTHIALVTYERVVYSWGEGSK---GQLGHGDLDPRNVPTSVEA-LKGKSIT 132

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            V+CG   +   +  G + T GDG+ G LGHGD  S S PR +++L  +     +CG  H
Sbjct: 133 RVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSVDVTSISCGPEH 192

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VS 462
              VV V V          G++F WG G  GRLG GD+E    P  V  L +P F Q V 
Sbjct: 193 ---VVGVGV---------DGEIFAWGKGKDGRLGLGDEEDFCEPMEVT-LRDPVFIQEVK 239

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLP--------TRVEGK--------LT 506
           CG   T+ LT  G +   GS  Y +LG     G L         T VEG+        L+
Sbjct: 240 CGVDGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALS 299

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
           K  V ++  G +H AV+     VY +GK  +G+LG G+T  R  P+ V+ + DK + ++ 
Sbjct: 300 KFRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQVQTMADKLISTVA 359

Query: 567 CGTSFTAAICLHKWV 581
           CG  +T A  +  ++
Sbjct: 360 CGEDYTVAGAMDNFL 374



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 144/321 (44%), Gaps = 15/321 (4%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           +P  +E   +L ++ +A    H ALVT +  V+SWGE   G+LGHG     + P  ++AL
Sbjct: 67  IPFKIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLDPRNVPTSVEAL 126

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           K  ++  VACG   +   + +G + T G  +   G LGHG+  S   P +L   L  + V
Sbjct: 127 KGKSITRVACGAGFSVFGSDNGIVMTCGDGST--GCLGHGDYHSASRP-RLIETLLSVDV 183

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
           +S+SCGP H   V   G++F +G G  G LG GD      P EV     +      CGV 
Sbjct: 184 TSISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEPMEVTLRDPVFIQEVKCGVD 243

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDG----DRGRLGHGDKEARLVPTCVAALVEPNF 458
            T  + ++    +  SN  +        G     +      + E R VPT V AL +   
Sbjct: 244 GTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKFRV 303

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG----DPKANGKLPTRVEGKLTKNFVEEIA 514
             +  G   +  +   G VY  G   +GQLG     P+   + P +V+  +    +  +A
Sbjct: 304 LDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPR---EAPAQVQ-TMADKLISTVA 359

Query: 515 CGDYHVAVLTSRTEVYTWGKG 535
           CG+ +         +Y WGKG
Sbjct: 360 CGEDYTVAGAMDNFLYLWGKG 380


>gi|224008819|ref|XP_002293368.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
 gi|220970768|gb|EED89104.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
          Length = 400

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 182/377 (48%), Gaps = 39/377 (10%)

Query: 200 GDGILGGGIHRSGSYA-GVKMDSFVPKAVESAV---VLDVQNIACGGRHAALVTKQGEVF 255
           G GI   G+ + G    G + D   PK +   +   V  VQ  A GG+   ++ K G V 
Sbjct: 1   GSGIASWGVAKRGQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKSGRVL 60

Query: 256 SWGEELGGRLGHGVD-----SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           S+G    G LGHG D     SD   P+ IDALKN  V  V+ GE H+  VT  GD+YTWG
Sbjct: 61  SFGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNEKVICVSAGELHSGCVTADGDVYTWG 120

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
              C  G LG G+     LP+++  G LE   VS++SCG  HT VVT  G++F++G G +
Sbjct: 121 EGFC--GQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFSWGLGRY 178

Query: 370 GVLGHGDRISVST--------PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           GVL   D ++++         P+ VD+L   R V  + G  H+  + E            
Sbjct: 179 GVL---DALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDE------------ 223

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN--FCQVSCGHSLTVALTTTGHVYT 479
            G L+T+G G  G LGHGD   +  P  V    E N    Q+S G  +++A++TTG VY 
Sbjct: 224 HGGLYTFGSGASGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMSMAVSTTGDVYA 283

Query: 480 MGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK-GAN 537
            G    G++G    N   LP +V+         ++ CG  H  ++     VY  G  G +
Sbjct: 284 WGKAKEGRIGLGNNNDICLPRKVDVGDANFKGVDVECGYVHSLIIGLDGSVYQCGGVGVD 343

Query: 538 GRLGHGDTDDRNFPSLV 554
           G+    +T    FP L+
Sbjct: 344 GKDDGQNTGGDGFPVLL 360



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 160/361 (44%), Gaps = 42/361 (11%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV---ACGEHHTCAVTLSGDMYTWG 310
           + SWG    G+ GHG   DVS PKL+       V +V   A G      +  SG + ++G
Sbjct: 4   IASWGVAKRGQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLSFG 63

Query: 311 GSNCNFGLLGHG----NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
                +G LGHG     ++S  L  +    L+   V  VS G  H+  VT+ G ++T+G+
Sbjct: 64  --TAQYGALGHGYDAGKQLSDCLRPRYIDALKNEKVICVSAGELHSGCVTADGDVYTWGE 121

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLR---TVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           G  G LG GDR     P +V +L GL        +CG  HT  V E             G
Sbjct: 122 GFCGQLGLGDRRPHLLPEQV-TLGGLEDECVSNMSCGCRHTLVVTE------------EG 168

Query: 424 KLFTWGDGDRG-----RLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
           ++F+WG G  G      L   D   +  P  V AL       VS GH  ++ L   G +Y
Sbjct: 169 EVFSWGLGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHGGLY 228

Query: 479 TMGSPVYGQLGDPKANGK-LPTRVEGKLTKNF-VEEIACG-DYHVAVLTSRTEVYTWGKG 535
           T GS   G LG     G+  P +V      N  + +++ G D  +AV T+  +VY WGK 
Sbjct: 229 TFGSGASGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMSMAVSTT-GDVYAWGKA 287

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM--CSGCR 593
             GR+G G+ +D   P  V+ + D   K +     +     +H  + G+D S+  C G  
Sbjct: 288 KEGRIGLGNNNDICLPRKVD-VGDANFKGVDVECGY-----VHSLIIGLDGSVYQCGGVG 341

Query: 594 I 594
           +
Sbjct: 342 V 342


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 175/350 (50%), Gaps = 30/350 (8%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           ++++  A G RH+ L+   G+V S G+   G+LG       +  K I AL+ ++V+LV+C
Sbjct: 23  VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVSC 82

Query: 293 GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           G+ H+ AV   G ++ WG GS    G  G   E +L +P K+   L  I +  VSCG +H
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLG-TGEFKETNL-IPMKIK-TLNDIKIKQVSCGHYH 139

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +  ++  GQ+F++G  + G LG G +  S ++P+ V SL G+   + A G  H+ A+   
Sbjct: 140 SLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFAL--- 196

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLG-HGDKEA--RLVPTCVAALVEPNFCQVSCGHSL 467
                      SG  F WG  + G+L  H +  +     P  ++AL       +SCG+  
Sbjct: 197 ---------SLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEH 247

Query: 468 TVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTS 525
           TV LT  G V+T G   YGQLG  P A    P  VEG      V +I CG YH +A + +
Sbjct: 248 TVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEG--IDGLVSQIDCGSYHTLAYVYT 305

Query: 526 RTEVYTWGKGANGRLG----HGDTDDRNFPSLVEA--LKDKQVKSIVCGT 569
             +V ++G+    +         T++ +F  L+ A  L D QVK I  GT
Sbjct: 306 TGKVVSFGREPTCKSSPTHPEALTENVDFTCLISADDLVDFQVKHIFAGT 355



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 126/249 (50%), Gaps = 22/249 (8%)

Query: 164 DTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV 223
           +T  V L S     S    H      G VF WG    +G LG G          K  + +
Sbjct: 73  ETLHVDLVSCGKEHSLAVCHK-----GRVFAWG-AGSEGQLGTG--------EFKETNLI 118

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           P  +++   + ++ ++CG  H+  +++ G+VFSWG    G+LG G    S  S P+ + +
Sbjct: 119 PMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQAS-PQRVRS 177

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEG 339
           L  I +  VA G  H+ A++LSG  + WG +N    L  H N +S   + P  ++  L+ 
Sbjct: 178 LDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAG-QLALHKNNVSGQSYKPYSISA-LKN 235

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           + V  +SCG  HT V+T  G++FTFGD T+G LGH      S P+ V+ + GL + +  C
Sbjct: 236 LGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVS-QIDC 294

Query: 400 GVWHTAAVV 408
           G +HT A V
Sbjct: 295 GSYHTLAYV 303



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 134/263 (50%), Gaps = 22/263 (8%)

Query: 225 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDALK 283
           K + +   L V  ++CG  H+  V  +G VF+WG    G+LG G   + +  P  I  L 
Sbjct: 67  KRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN 126

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIHV 342
           +I ++ V+CG +H+ A++  G +++W GSN + G LG G +  S   P+++   L+GI +
Sbjct: 127 DIKIKQVSCGHYHSLALSEGGQVFSW-GSNSD-GQLGLGKKFPSQASPQRVRS-LDGIPL 183

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVST--PREVDSLKGLRTVRAAC 399
           + V+ G  H+  ++ +G  F +G    G L  H + +S  +  P  + +LK L  +  +C
Sbjct: 184 AQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISC 243

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           G  HT  + +            +GK+FT+GD   G+LGH     +  P  V   ++    
Sbjct: 244 GYEHTVVLTQ------------NGKVFTFGDNTYGQLGHSPTAEKSGPQLVEG-IDGLVS 290

Query: 460 QVSCGHSLTVA-LTTTGHVYTMG 481
           Q+ CG   T+A + TTG V + G
Sbjct: 291 QIDCGSYHTLAYVYTTGKVVSFG 313



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 23/247 (9%)

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
           L G+ +   + G  H+ ++ S GQ+ + GD   G LG       +  + + +L+ L    
Sbjct: 20  LGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDL 79

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVE 455
            +CG  H+ AV            C  G++F WG G  G+LG G+ KE  L+P  +  L +
Sbjct: 80  VSCGKEHSLAV------------CHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLND 127

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VE 511
               QVSCGH  ++AL+  G V++ GS   GQLG  K   K P++   +  ++     + 
Sbjct: 128 IKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGK---KFPSQASPQRVRSLDGIPLA 184

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLG--HGDTDDRNF-PSLVEALKDKQVKSIVCG 568
           ++A G  H   L+     + WG+   G+L     +   +++ P  + ALK+  V  I CG
Sbjct: 185 QVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCG 244

Query: 569 TSFTAAI 575
              T  +
Sbjct: 245 YEHTVVL 251



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 24/190 (12%)

Query: 137 ESACGSVNSL--SSGG--------SDGRTGHLKGL----SGDTFRVSLSSAVSSSSQGSG 182
           + +CG  +SL  S GG        SDG+ G  K      S    R      ++  + G  
Sbjct: 132 QVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGA 191

Query: 183 HDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACG 241
           H    SL G  F WG      +    +H++     V   S+ P ++ +   L V  I+CG
Sbjct: 192 HSFALSLSGTSFGWGRNNAGQL---ALHKNN----VSGQSYKPYSISALKNLGVIYISCG 244

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-V 300
             H  ++T+ G+VF++G+   G+LGH   ++ S P+L++ +  + V  + CG +HT A V
Sbjct: 245 YEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGL-VSQIDCGSYHTLAYV 303

Query: 301 TLSGDMYTWG 310
             +G + ++G
Sbjct: 304 YTTGKVVSFG 313


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P     L ++ V  +AC E     ++ SG +YT   S
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCAGLASLGVSQIACAEKRFLILSRSGRVYTQAYS 479

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G +    + +++ S G  H   + + G+++++G G  G
Sbjct: 480 SDALA------------PQLVQGLVSRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 371 VLGHGDRISVSTPREVDSL----KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +      G R V  ACG  ++AA+             + G+L+
Sbjct: 527 RLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAIT------------AEGELY 574

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  VE KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLVE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 142/301 (47%), Gaps = 29/301 (9%)

Query: 181 SGHDDGD------SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           + H DG       + G+V+ WG C   G LG G         + + +F  K     VV  
Sbjct: 500 AAHSDGHHYLALAATGEVYSWG-CGDGGRLGHGDTVPLEEPKL-ISAFCGKQAGQRVV-- 555

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC-- 292
             +IACG  ++A +T +GE+++WG    GRLGHG   D + P L+  LK + V  VAC  
Sbjct: 556 --HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 613

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+  T AVT +G +++WG  + ++G LG G       P KL   L+ + V  V CG   +
Sbjct: 614 GDAQTLAVTENGQVWSWG--DGDYGKLGRGGSDGCKTP-KLVEKLQDLDVVKVRCGSQFS 670

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  GQ++++G G    LGHG    V  P+ ++ L+G + +  A G  H  A+ E   
Sbjct: 671 VALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE--- 727

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                      ++ +WG  D+ +        +  P  +  L   +   ++CG + + A +
Sbjct: 728 ---------DSEVHSWGSNDQCQHFDTLHATKPEPAALPGLDTKHIVGIACGPAQSFAWS 778

Query: 473 T 473
           +
Sbjct: 779 S 779


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 171/344 (49%), Gaps = 30/344 (8%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G  H+ L+   G V S G+   G+LG         P+ I AL+ ++V LV+CG+ H+ 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSL 88

Query: 299 AVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG ++   G LG G  + + ++PKK+   L GI +  V+CG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAASE--GQLGIGEFKETTFIPKKIK-TLAGIKIIQVACGHYHSVALSE 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            GQ+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                SG  F WG  + G+L   G+     R  P  + AL       +SCG+  T  LT 
Sbjct: 197 ---SLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253

Query: 474 TGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYT 531
            G V+T G   YGQLG DP A  + P  VE    +  V +I CG D+ +A + +  +V +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVS 311

Query: 532 WGK--GANGRLGH--GDTDDRNFPSLVEA--LKDKQVKSIVCGT 569
           +G+  G   R  H     +  +   LV A  L D QVK I  GT
Sbjct: 312 FGRGPGCASRSPHPGALAESSDISCLVSAKDLADVQVKHIFAGT 355



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 143/278 (51%), Gaps = 28/278 (10%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKGL------SGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V+L S     S    H      G V
Sbjct: 46  SCGD----NSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHK-----GRV 96

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG  + +G LG G          K  +F+PK +++   + +  +ACG  H+  +++ G
Sbjct: 97  FAWGAAS-EGQLGIG--------EFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDG 147

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG    G+LG G +    + P+ + +L+ I +  VA G HH+ A++LSG  + WG 
Sbjct: 148 QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGS 207

Query: 312 SNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +N     L G+   +  + P  + G L+ + V S+SCG  HTAV+T  G++FTFGD ++G
Sbjct: 208 NNAGQLALSGNNAPVQRYKPVSI-GALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYG 266

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            LGH        P+ V+ ++GL + +  CG  HT A +
Sbjct: 267 QLGHDPTAEKRGPQLVERIEGLVS-QIDCGSDHTLAYI 303



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 23/236 (9%)

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  H+ ++ S G + + GD + G LG         P  + +L+ L     +CG  H+ AV
Sbjct: 31  GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 90

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHS 466
                       C  G++F WG    G+LG G+ KE   +P  +  L      QV+CGH 
Sbjct: 91  ------------CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHY 138

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAV 522
            +VAL+  G V++ G+  +GQLG  K   + P++   +  ++     + ++A G +H   
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQVAAGGHHSFA 195

Query: 523 LTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           L+     + WG    G+L   G+     R  P  + ALK   V SI CG   TA +
Sbjct: 196 LSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 19/192 (9%)

Query: 174 VSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
           ++  + G  H    SL G  F WG         G +  SG+ A V+   + P ++ +   
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNNA-----GQLALSGNNAPVQ--RYKPVSIGALKT 235

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L V +I+CG +H A++T+ G+VF++G+   G+LGH   ++   P+L++ ++ + V  + C
Sbjct: 236 LGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQIDC 294

Query: 293 GEHHTCA-VTLSGDMYTWG-GSNC-----NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
           G  HT A +  +G + ++G G  C     + G L   +++S  +  K    L  + V  +
Sbjct: 295 GSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGALAESSDISCLVSAK---DLADVQVKHI 351

Query: 346 SCGPWHTAVVTS 357
             G +   V TS
Sbjct: 352 FAGTYANFVTTS 363


>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 186/376 (49%), Gaps = 38/376 (10%)

Query: 217 VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSH 275
           +  D   P+ +    +  + ++ACGG H   +T  G+V SWG    G+LGHG V S+  +
Sbjct: 35  ILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLY 94

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK + +L    +  V+ G  H+  V+ +G ++T G  + +FG LGHG+  S   P K++ 
Sbjct: 95  PKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCG--DGSFGQLGHGDHASHCSPVKVSC 152

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRI-SVSTPREVDSLKGLR 393
            ++  HV  V+CG  H+ V+    Q++ FG G  G LG   DR+ SV+ P+ V   +G+ 
Sbjct: 153 FVD-QHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVE 211

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
               A    H+AAV               G ++TWG G +G      ++AR VP C+ + 
Sbjct: 212 IAGIAANGDHSAAV------------SVDGHVYTWGRGFKGF-----EDAR-VPQCLNSS 253

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTK--- 507
           +  NF +V+ G +  +A++  G V  +G    G L D +       LP   E  L K   
Sbjct: 254 L--NFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLEKVPG 311

Query: 508 ---NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP---SLVEALKDKQ 561
                + +IA G  H  ++T   E+ TWG G +G+LG GDT DR  P   SL   L +  
Sbjct: 312 LDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDRISPVTVSLGYDLNEAA 371

Query: 562 VKSIVCGTSFTAAICL 577
              + CG+ FT A+ +
Sbjct: 372 SVIVFCGSGFTFAVTM 387



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 149/348 (42%), Gaps = 59/348 (16%)

Query: 172 SAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESA 230
           S++SS + G  H     S G V  WG     G LG G+        V  +S  PKAV S 
Sbjct: 51  SSISSLACGGAHVIALTSAGKVLSWGRGN-SGQLGHGL--------VVSNSLYPKAVTSL 101

Query: 231 VVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV 290
               + +++ G  H+  V+  G VF+ G+   G+LGHG  +    P  +    + +VE V
Sbjct: 102 DGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHGDHASHCSPVKVSCFVDQHVEQV 161

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE--MSLWLPKKLNGPLEGIHVSSVSCG 348
           ACG  H+  +     +Y +G      G LG  N+   S+ +PK ++G  EG+ ++ ++  
Sbjct: 162 ACGMRHSLVLLKGNQVYGFGSG--KRGQLGVSNDRVKSVNVPKVVSG-FEGVEIAGIAAN 218

Query: 349 PWHTAVVTSAGQLFTFGDGTFGV-------------------LGHGDRISVSTPREVDSL 389
             H+A V+  G ++T+G G  G                    LG    +++S   EV  L
Sbjct: 219 GDHSAAVSVDGHVYTWGRGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSGEGEVCML 278

Query: 390 KG--------LRTVRAACGVWHT-------------AAVVEVMVGSSSSSNCSS-GKLFT 427
            G        L+ +  A  + H                + ++  G+  S   +  G++ T
Sbjct: 279 GGNHLGVLSDLQNISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKT 338

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAA---LVEPNFCQVSCGHSLTVALT 472
           WG G+ G+LG GD   R+ P  V+    L E     V CG   T A+T
Sbjct: 339 WGWGEHGQLGLGDTRDRISPVTVSLGYDLNEAASVIVFCGSGFTFAVT 386


>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
           CCMP2712]
          Length = 308

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 159/300 (53%), Gaps = 33/300 (11%)

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH----VSSVS 346
           ACG+ HT A+T  G +Y+WG   C  G LGHGN  S  LPK L+ PL  I+    +++++
Sbjct: 4   ACGKLHTVALTEEGRVYSWG---CANGALGHGNSKSQLLPKALDRPL--IYSMPSITTIA 58

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
           CG +HT  V   G L+T+G   +G LGHGD  +   PR V++L+    ++AA G  H+  
Sbjct: 59  CGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLV 118

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGH 465
           + E            + K++ +G    G+LG   K +    P  V+ L     C ++CG+
Sbjct: 119 LTE------------ANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGY 166

Query: 466 SLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVL 523
           S ++AL  +  +Y+ G    GQLG     +  +P  +     K+ V++I+CG D+++A +
Sbjct: 167 SHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLT-MFKKSQVQQISCGYDHNIAFV 225

Query: 524 TSRT--------EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +           +VYTWG+G  G+LGH +   R  P +V+ L  + ++++  G   +AAI
Sbjct: 226 SEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAI 285



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 150/319 (47%), Gaps = 29/319 (9%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID---ALKNINVELVACGEH 295
           ACG  H   +T++G V+SWG    G LGHG       PK +D        ++  +ACGE 
Sbjct: 4   ACGKLHTVALTEEGRVYSWGCA-NGALGHGNSKSQLLPKALDRPLIYSMPSITTIACGEF 62

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           HT AV   G ++TWG +   +G LGHG+  +  LP+++    + I + + + G  H+ V+
Sbjct: 63  HTLAVGQDGTLWTWGRNQ--YGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQ-HSLVL 119

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           T A +++ FG   FG LG   ++  S  P  V  L+        CG  H+ A+++     
Sbjct: 120 TEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLK----- 174

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT- 473
                  S +L++WG  D G+LG G   +  VP  +    +    Q+SCG+   +A  + 
Sbjct: 175 -------SEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSE 227

Query: 474 --------TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
                      VYT G    GQLG  +   +   +V   L    +  +A G +  A +  
Sbjct: 228 YAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDE 287

Query: 526 RTEVYTWGKGANGRLGHGD 544
             ++YTWG    G+LGHGD
Sbjct: 288 AKQLYTWGCSREGQLGHGD 306



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 136/303 (44%), Gaps = 19/303 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD---VQNIACGGRHAA 246
           G V+ WG    +G LG G  +S           +PKA++  ++     +  IACG  H  
Sbjct: 17  GRVYSWG--CANGALGHGNSKS---------QLLPKALDRPLIYSMPSITTIACGEFHTL 65

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
            V + G +++WG    G+LGHG       P+ ++AL+       A G  H+  +T +  +
Sbjct: 66  AVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKV 125

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           Y +G SN  FG LG  +++       +   L    V  ++CG  H+  +  + QL+++G 
Sbjct: 126 YAFG-SNV-FGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGR 183

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
              G LG G   S   P  +   K  +  + +CG  H  A V    G          K++
Sbjct: 184 NDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPP---LEKVY 240

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           TWG G+ G+LGH +  +R VP  V  L+      V+ G   + A+     +YT G    G
Sbjct: 241 TWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREG 300

Query: 487 QLG 489
           QLG
Sbjct: 301 QLG 303



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 94/196 (47%), Gaps = 25/196 (12%)

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV---A 451
           V AACG  HT A+ E             G++++WG  + G LGHG+ +++L+P  +    
Sbjct: 1   VGAACGKLHTVALTE------------EGRVYSWGCAN-GALGHGNSKSQLLPKALDRPL 47

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL--GDPKANGKLPTRVEGKLTKNF 509
               P+   ++CG   T+A+   G ++T G   YGQL  GD K + KLP RVE  L K  
Sbjct: 48  IYSMPSITTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTH-KLPRRVEA-LEKKI 105

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLG-HGDTDDRNFPSLVEALKDKQVKSIVCG 568
             + A G  H  VLT   +VY +G    G+LG          P +V  L+   V  I CG
Sbjct: 106 CIKAAAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCG 165

Query: 569 TSFTAAIC----LHKW 580
            S + A+     L+ W
Sbjct: 166 YSHSMALLKSEQLYSW 181



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 12/153 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V +I CG  H+  + K  +++SWG    G+LG G       P+ +   K   V+ ++CG 
Sbjct: 159 VCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGY 218

Query: 295 HHTCAVT--LSG-------DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
            H  A     +G        +YTWG      G LGH    S  +PK +   L    + +V
Sbjct: 219 DHNIAFVSEYAGPGVPPLEKVYTWG--RGEEGQLGHDELYSRCVPKVVQ-TLLARGIRAV 275

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
           + G + +A +  A QL+T+G    G LGHGD I
Sbjct: 276 AAGGFSSAAIDEAKQLYTWGCSREGQLGHGDDI 308


>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 178/381 (46%), Gaps = 42/381 (11%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G  +  + P+ V    + DV  +AC    +A + K G++++WG    G LG+G   +++ 
Sbjct: 46  GNSISQYSPQLVP---IQDVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINV 102

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P L+  LK+++ + VACG +H  A+T  G +YTWG  N + G LGH  + S  LP +   
Sbjct: 103 PSLVQCLKHLDFKFVACGNYHMAAITTDGQLYTWG--NFDHGKLGHSFDNSAKLPSREKY 160

Query: 336 PLE--------------GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISV 380
             +                 V  V+ G   T +++  G +++ G    G+LG+  + +  
Sbjct: 161 EYQKNLGSAKLPELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGYQTKNVDE 220

Query: 381 STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC-SSGKLFTWGDGDRGRLGHG 439
            T +++  LK                +V++  G+  S    S G +F WG    G+LG  
Sbjct: 221 PTFKQIPDLKN---------------IVQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTP 265

Query: 440 DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT 499
                  P  +  L  P   Q SCG     AL+T G +YT G    GQLG P     +PT
Sbjct: 266 SPSVVQTPQQIKGL--PKIKQFSCGEQFIGALSTDGVLYTWGFGGDGQLGTPSKQ-DIPT 322

Query: 500 RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG-DTDDRNFPSLVEALK 558
             + +  +N +++++CG  HV ++ S+ ++Y  G+G  G+LG G +T+  N       L 
Sbjct: 323 PHKIQFDQN-IDKVSCGQAHVGIV-SKNKLYMHGRGKEGQLGRGSETESPNSSRYSPLLV 380

Query: 559 DKQVKSIVCGTSFTAAICLHK 579
            + V  I CG S + A+   K
Sbjct: 381 MENVIKIACGGSHSFAVVNQK 401



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 167/339 (49%), Gaps = 16/339 (4%)

Query: 245 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
           ++ V  Q ++++WG    G+LG G       P+L+      +V  VAC    + A+  SG
Sbjct: 23  SSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPIQ---DVLFVACKSSVSAAIDKSG 79

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            +YTWG S   FGLLG+G   ++ +P  L   L+ +    V+CG +H A +T+ GQL+T+
Sbjct: 80  KLYTWGRS--KFGLLGNGQVENINVP-SLVQCLKHLDFKFVACGNYHMAAITTDGQLYTW 136

Query: 365 GDGTFGVLGHGDRISVSTP--REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS- 421
           G+   G LGH    S   P   + +  K L + +    V     V +V +G   +   S 
Sbjct: 137 GNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPELVQLNFKVQQVALGDQFTIILSE 196

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            G +++ G   +G LG+  K     PT        N  Q+  G   +VAL + G+++  G
Sbjct: 197 DGNVYSVGLNKKGILGYQTKNVD-EPTFKQIPDLKNIVQIDSGTDFSVALDSDGNMFAWG 255

Query: 482 SPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
           S  +GQLG P  +  + P +++G L K  +++ +CG+  +  L++   +YTWG G +G+L
Sbjct: 256 SNYFGQLGTPSPSVVQTPQQIKG-LPK--IKQFSCGEQFIGALSTDGVLYTWGFGGDGQL 312

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK 579
           G     D   P  ++   D+ +  + CG +    +  +K
Sbjct: 313 GTPSKQDIPTPHKIQF--DQNIDKVSCGQAHVGIVSKNK 349



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 5/148 (3%)

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
           A +   V  +SS   S  +L+ WG  + G+LG G+  ++  P  V      +   V+C  
Sbjct: 13  AFIGSSVTFTSSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPI---QDVLFVACKS 69

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
           S++ A+  +G +YT G   +G LG+ +  N  +P+ V+     +F + +ACG+YH+A +T
Sbjct: 70  SVSAAIDKSGKLYTWGRSKFGLLGNGQVENINVPSLVQCLKHLDF-KFVACGNYHMAAIT 128

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPS 552
           +  ++YTWG   +G+LGH   +    PS
Sbjct: 129 TDGQLYTWGNFDHGKLGHSFDNSAKLPS 156


>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
           livia]
          Length = 719

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 27/338 (7%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+CG  H A+VT  G+++ +G    G+LG G  + VS P  + ALK    +L  CG +HT
Sbjct: 35  ISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHT 94

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVVT 356
              T  G++Y  GG++     LG   E S +    L       H +  ++ G + +A VT
Sbjct: 95  LVYTEKGNVYAAGGNSEGQLGLGDTEERSTF---HLISFFTNQHKIKQLAAGSYTSAAVT 151

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             GQLF +GD + G +G  D   VS P +VD  K + ++  +CG +H+A +         
Sbjct: 152 EDGQLFVWGDNSEGQIGLADEACVSVPCQVDVGKPVSSI--SCGYYHSALIT-------- 201

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEAR--LVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                 G+L+T+G+ + G+LG   ++ +   VP  V  ++E    +V+CG   TV LT T
Sbjct: 202 ----GDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIME-KVNKVACGGEHTVVLTET 256

Query: 475 GHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             VYT G   YGQLG         +P  V+  L ++ +  I CG+ H AV+     ++T+
Sbjct: 257 -DVYTFGLGQYGQLGHGTFIFETSVPKSVK-HLRRHKICNITCGENHTAVVAENGLMFTF 314

Query: 533 GKGANGRLGHGDTDDRNF--PSLVEALKDKQVKSIVCG 568
           G G +G+LG G+ +  N   P+L        V  + CG
Sbjct: 315 GDGRHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACG 352



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 161/333 (48%), Gaps = 35/333 (10%)

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           V + G VF++G+    R    + S           KN    L++CG+ HT  VT +G +Y
Sbjct: 3   VLESGAVFTFGKS---RFAEDIPSKF-------WFKNDKPVLISCGDEHTAIVTGNGKLY 52

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +G +  N+G LG G++ ++  P  +   L+        CG  HT V T  G ++  G  
Sbjct: 53  MFGSN--NWGQLGLGSKNTVSKPTCVKA-LKPEKTKLAVCGRNHTLVYTEKGNVYAAGGN 109

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           + G LG GD    ST   +        ++  A G + +AAV E             G+LF
Sbjct: 110 SEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTE------------DGQLF 157

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            WGD   G++G  D+    VP C   + +P    +SCG+  +  +T  G +YT G P  G
Sbjct: 158 VWGDNSEGQIGLADEACVSVP-CQVDVGKP-VSSISCGYYHSALITGDGELYTFGEPENG 215

Query: 487 QLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           +LG   +   N ++P  V G + K  V ++ACG  H  VLT  T+VYT+G G  G+LGHG
Sbjct: 216 KLGLLPEQLKNNRVPQPVPGIMEK--VNKVACGGEHTVVLT-ETDVYTFGLGQYGQLGHG 272

Query: 544 D-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               + + P  V+ L+  ++ +I CG + TA +
Sbjct: 273 TFIFETSVPKSVKHLRRHKICNITCGENHTAVV 305



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 27/254 (10%)

Query: 155 TGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSY 214
           T HL     +  ++   +A S +S     D     G +F+WG+             S   
Sbjct: 124 TFHLISFFTNQHKIKQLAAGSYTSAAVTED-----GQLFVWGD------------NSEGQ 166

Query: 215 AGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
            G+  ++ V    +  V   V +I+CG  H+AL+T  GE++++GE   G+LG  +   + 
Sbjct: 167 IGLADEACVSVPCQVDVGKPVSSISCGYYHSALITGDGELYTFGEPENGKLGL-LPEQLK 225

Query: 275 HPKLIDALKNI--NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPK 331
           + ++   +  I   V  VACG  HT  +T + D+YT+G     +G LGHG  +    +PK
Sbjct: 226 NNRVPQPVPGIMEKVNKVACGGEHTVVLTET-DVYTFGLG--QYGQLGHGTFIFETSVPK 282

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST--PREVDSL 389
            +   L    + +++CG  HTAVV   G +FTFGDG  G LG G+    +   P    + 
Sbjct: 283 SVKH-LRRHKICNITCGENHTAVVAENGLMFTFGDGRHGKLGLGEENYTNQFDPTLCYNF 341

Query: 390 KGLRTVRAACGVWH 403
                +  ACG  H
Sbjct: 342 LRFTVLLVACGGCH 355


>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
          Length = 1697

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 172/344 (50%), Gaps = 34/344 (9%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +I+CG  H+A VT+QG +F +G+   G+LG  +   V+ P  +  LK    + VACG  H
Sbjct: 38  HISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDH 97

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G++   GG++     LGH N+   +  ++L    +   +  +S G   +A +T
Sbjct: 98  TLVSTSQGEILAAGGNSDGQLGLGHCNDSISF--QRLRPFCDYAPIKLLSAGDHTSAALT 155

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G LG G+      P+E++  + +  V  +CG  H+A V +       
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPQELNMGQSIHWV--SCGYRHSALVTD------- 206

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                SG ++T+G+   GRLG    +      P  V +L   +  QV+CG   T+AL T 
Sbjct: 207 -----SGDVYTFGESADGRLGLSAHQLANHSYPQRVESLR--SVLQVACGGKHTLAL-TE 258

Query: 475 GHVYTMGSPVYGQLGDPKANGKL------PTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
             +Y  G   +GQLG     G L      P  V G   K+ V  + CG+ H A++T    
Sbjct: 259 DELYCFGGGEFGQLG----LGMLVFVADSPVAV-GHFRKDRVTHVTCGEQHSALITDSGL 313

Query: 529 VYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCGTS 570
           +YT+G G +G+LGHGD +  N   P++ +   +  V ++ CG+S
Sbjct: 314 LYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSS 357



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 36/300 (12%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACG 293
            Q++ACG  H  + T QGE+ + G    G+LG G  +D +S  +L        ++L++ G
Sbjct: 88  AQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAG 147

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           +H + A+T  G ++ WG ++   G LG GN+    LP++LN    G  +  VSCG  H+A
Sbjct: 148 DHTSAALTEDGRLFLWGDNSA--GQLGFGNDSHALLPQELNM---GQSIHWVSCGYRHSA 202

Query: 354 VVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +VT +G ++TFG   DG  G+  H    + S P+ V+SL+ +  ++ ACG  HT A+ E 
Sbjct: 203 LVTDSGDVYTFGESADGRLGLSAH-QLANHSYPQRVESLRSV--LQVACGGKHTLALTE- 258

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-----PTCVAALVEPNFCQVSCGH 465
                        +L+ +G G+ G+LG G     LV     P  V    +     V+CG 
Sbjct: 259 ------------DELYCFGGGEFGQLGLG----MLVFVADSPVAVGHFRKDRVTHVTCGE 302

Query: 466 SLTVALTTTGHVYTMGSPVYGQL--GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
             +  +T +G +YT G   +G+L  GD     +    V  +  +  V  +ACG  H+ V 
Sbjct: 303 QHSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLVF 362



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 118/219 (53%), Gaps = 23/219 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F+WG+ +  G LG G   + S+A       +P+  E  +   +  ++CG RH+ALVT
Sbjct: 158 GRLFLWGDNSA-GQLGFG---NDSHA------LLPQ--ELNMGQSIHWVSCGYRHSALVT 205

Query: 250 KQGEVFSWGEELGGRLG---HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
             G+V+++GE   GRLG   H + ++ S+P+ +++L+  +V  VACG  HT A+T   ++
Sbjct: 206 DSGDVYTFGESADGRLGLSAHQL-ANHSYPQRVESLR--SVLQVACGGKHTLALT-EDEL 261

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           Y +GG    FG LG G  + +       G      V+ V+CG  H+A++T +G L+TFGD
Sbjct: 262 YCFGGG--EFGQLGLGMLVFVADSPVAVGHFRKDRVTHVTCGEQHSALITDSGLLYTFGD 319

Query: 367 GTFGVLGHGDR--ISVSTPREVDSLKGLRTVRAACGVWH 403
           G  G LGHGD    +  TP           +  ACG  H
Sbjct: 320 GRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 621 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 675

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      I +++ S G  H   + + G+++++G G  G
Sbjct: 676 SDTLA------------PQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 722

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 723 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 770

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 771 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 830

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 831 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 889

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 890 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 930



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 153/323 (47%), Gaps = 32/323 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 666 NGRV-YTQAYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 723

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 724 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 778

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 779 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 836

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 837 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 895

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 896 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 943

Query: 442 EARLVPTCVAALVEPNFCQVSCG 464
             +  P+ +  L   +   ++CG
Sbjct: 944 VTKPEPSALPGLDTKHIVGIACG 966



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 17/162 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG+  GD    G + R GS  G K     PK +E    LDV  + CG + +  +T
Sbjct: 821 GQVWSWGD--GDY---GKLGRGGS-DGCK----TPKLIEKLQDLDVVKVRCGSQFSIALT 870

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           K G+V+SWG+    RLGHG +  V +PKL++ L+   V  VA G  H  A+T   ++++W
Sbjct: 871 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 930

Query: 310 GGSN-CNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 349
           G ++ C      H + + +  P+    P L+  H+  ++CGP
Sbjct: 931 GSNDQCQ-----HFDTLRVTKPEPSALPGLDTKHIVGIACGP 967


>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
 gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
          Length = 725

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 127/243 (52%), Gaps = 15/243 (6%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           + V +IACG  H+A +T  G V +WG+   GRLGHG   D   PKL++AL       +AC
Sbjct: 1   MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIAC 60

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G      + ++ D   W   + ++G LG G      LP K+   L G+ V  V CG   +
Sbjct: 61  GSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFS 119

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T +G ++T+G G F  LGHG    V  P++V +L+G + +  A G  H  A      
Sbjct: 120 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA------ 173

Query: 413 GSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                  CS SG+++TWGD D G+LG G   A   P  VAAL   +  +V+CG + T+AL
Sbjct: 174 -------CSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 226

Query: 472 TTT 474
           +T+
Sbjct: 227 STS 229



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 119/239 (49%), Gaps = 16/239 (6%)

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           + V+ ++CG  H+A +T++G + T+G G +G LGHGD      P+ V++L G R +  AC
Sbjct: 1   MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIAC 60

Query: 400 GVWHTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           G               + + C      +++WGDGD G+LG G  +   +P  + +L    
Sbjct: 61  G------------SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 108

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACG 516
             +V CG   +VALT +G VYT G   + +LG    +  + P +V     K  +  IA G
Sbjct: 109 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS-IATG 167

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             H    +   EVYTWG    G+LG G       P LV AL+ K +  + CG++ T A+
Sbjct: 168 SLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 226



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 114/243 (46%), Gaps = 17/243 (6%)

Query: 285 INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 344
           ++V  +ACG  H+ A+T SG + TWG     +G LGHG+      PK +   L G     
Sbjct: 1   MSVADIACGSAHSAAITASGHVLTWGKGR--YGRLGHGDSEDQLRPKLVEA-LLGYRAID 57

Query: 345 VSCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
           ++CG     T  +T    ++++GDG +G LG G       P +++SL GL  V+  CG  
Sbjct: 58  IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQ 117

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
            + A+ +            SG ++TWG GD  RLGHG  +    P  VAAL       ++
Sbjct: 118 FSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIA 165

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
            G    VA + +G VYT G    GQLGD         R+   L    + ++ CG  H   
Sbjct: 166 TGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLA 225

Query: 523 LTS 525
           L++
Sbjct: 226 LST 228



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 118/241 (48%), Gaps = 33/241 (13%)

Query: 136 SESACGSVNS---------LSSG-GSDGRTGHLKGLSGDTFRVSLSSAV---SSSSQGSG 182
           ++ ACGS +S         L+ G G  GR GH  G S D  R  L  A+    +     G
Sbjct: 4   ADIACGSAHSAAITASGHVLTWGKGRYGRLGH--GDSEDQLRPKLVEALLGYRAIDIACG 61

Query: 183 HDDGDSL-----GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQN 237
             D  +L      +V+ WG+  GD    G + R GS  G K+    P  +ES   L V  
Sbjct: 62  SGDAQTLCITDDDNVWSWGD--GDY---GKLGRGGS-DGCKL----PYKIESLAGLGVVK 111

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           + CG + +  +TK G V++WG+    RLGHG    V  PK + AL+   +  +A G  H 
Sbjct: 112 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 171

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A + SG++YTWG +  + G LG G   ++  P +L   L+G H+  V+CG  HT  +++
Sbjct: 172 VACSDSGEVYTWGDN--DEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALST 228

Query: 358 A 358
           +
Sbjct: 229 S 229



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 10/100 (10%)

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V +IACG  H A +T+   V TWGKG  GRLGHGD++D+  P LVEAL   +   I CG+
Sbjct: 3   VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 62

Query: 570 SFTAAICL----HKWVSG------VDQSMCSGCRIPFNFK 599
                +C+    + W  G      + +    GC++P+  +
Sbjct: 63  GDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIE 102


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 137/408 (33%), Positives = 190/408 (46%), Gaps = 35/408 (8%)

Query: 170 LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
           L S V++ + G  H     S G V+ WG     G LG      GSY     D   P AV 
Sbjct: 313 LPSGVTAIAAGGAHTCALTSSGGVWCWGG-NDSGQLG-----DGSY----TDRSTPGAV- 361

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           S +   V  IA GG H    T  G V+ WG    G+LG G  +D S P  +  L +  V 
Sbjct: 362 SGLPSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPS-GVT 420

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            +A G +HTCA+T S  ++ WG  +  +G LG G   +   P  ++G   G  V++++ G
Sbjct: 421 AIAAGNYHTCALTGSDGVWCWG--DNFYGQLGDGTTTNRSTPGAVSGLPSG--VTAIAAG 476

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            +HT  +TS+G ++ +G    G LG G   + STP  V  L    T  AA G +HT A++
Sbjct: 477 NYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLPSGVTAIAA-GDYHTCALM 535

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                       SSG ++ WG  +RG+LG G       P  V  L       ++ G+  T
Sbjct: 536 ------------SSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGL-PSGVMAIAAGNYHT 582

Query: 469 VALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
            ALT +  V+  G+   GQLGD    N   P  V G    + V  IA G+YH   LTS  
Sbjct: 583 CALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGL--PSGVTAIAAGNYHTCALTSSG 640

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            V+ WG   +G+LG G T +R+ P  V  L    V +I  G   T A+
Sbjct: 641 GVWCWGYNLSGQLGDGTTTNRSTPGAVSGLP-SGVTAIAAGDEHTCAL 687



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 168/361 (46%), Gaps = 24/361 (6%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G  +    P AV S +  +V  IA G  H   +T  G V+ WG+   G+LG G  +D S 
Sbjct: 197 GSTIYHITPVAV-SGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSST 255

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P  +  L +  V  +A G  +TCA+T SG ++ WG    + G LG G+  +   P  + G
Sbjct: 256 PAAVGGLPS-GVTAIAAGGRYTCALTSSGGVWCWG--RNDSGQLGDGSFTNRSTPGAVGG 312

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
              G  V++++ G  HT  +TS+G ++ +G    G LG G     STP  V  L    T 
Sbjct: 313 LPSG--VTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGVTA 370

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            AA G  HT A              SSG ++ WG    G+LG G    R  P  V+ L  
Sbjct: 371 IAAGGA-HTCA------------RTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGL-P 416

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIA 514
                ++ G+  T ALT +  V+  G   YGQLGD    N   P  V G    + V  IA
Sbjct: 417 SGVTAIAAGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGL--PSGVTAIA 474

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G+YH   LTS   V+ WG+  +G+LG G T +R+ P  V  L    V +I  G   T A
Sbjct: 475 AGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLP-SGVTAIAAGDYHTCA 533

Query: 575 I 575
           +
Sbjct: 534 L 534



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 165/362 (45%), Gaps = 26/362 (7%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   D   P AV S +   V  IA G  H   +T    V+ WG+   G+LG G  ++ S 
Sbjct: 401 GTTTDRSTPGAV-SGLPSGVTAIAAGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRST 459

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P  +  L +  V  +A G +HTCA+T SG ++ WG    + G LG G   +   P  + G
Sbjct: 460 PGAVSGLPS-GVTAIAAGNYHTCALTSSGGVWCWG--RNDSGQLGDGTTTNRSTPGAVGG 516

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL-KGLRT 394
              G  V++++ G +HT  + S+G ++ +G    G LG G     STP  V  L  G+  
Sbjct: 517 LPSG--VTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSGVMA 574

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
           + A  G +HT A+              S  ++ WG    G+LG G    R  P  V+ L 
Sbjct: 575 IAA--GNYHTCALT------------GSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGL- 619

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEI 513
                 ++ G+  T ALT++G V+  G  + GQLGD    N   P  V G    + V  I
Sbjct: 620 PSGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGL--PSGVTAI 677

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           A GD H   LT    V+ WG    G+LG G T +R+ P  V  L    V +I  G   T 
Sbjct: 678 AAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSGLP-SGVTAIAAGVYHTC 736

Query: 574 AI 575
           A+
Sbjct: 737 AL 738



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 156/348 (44%), Gaps = 37/348 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V  IA G  H   +T  GEV+ WG    G+LG G  +D S P  +  L +  V  +A G 
Sbjct: 62  VTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPS-GVTAIAAGG 120

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
            HTCA+T SG +  WGG+   FG LG G+      P  ++G   G  V++++ G  HT  
Sbjct: 121 AHTCALTSSGGVMCWGGN--YFGQLGDGSYTDRSTPVAVSGLPSG--VTAIAAGGAHTCA 176

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           + S+G ++ +G    G LG G  I   TP  V  L    T  AA G  HT A+       
Sbjct: 177 LMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEVTAIAA-GYAHTCALT------ 229

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                  SG ++ WGD   G+LG G       P  V  L       ++ G   T ALT++
Sbjct: 230 ------GSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGL-PSGVTAIAAGGRYTCALTSS 282

Query: 475 GHVYTMGSPVYGQLGD--------PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           G V+  G    GQLGD        P A G LP+          V  IA G  H   LTS 
Sbjct: 283 GGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSG---------VTAIAAGGAHTCALTSS 333

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             V+ WG   +G+LG G   DR+ P  V  L    V +I  G + T A
Sbjct: 334 GGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLP-SGVTAIAAGGAHTCA 380



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 153/337 (45%), Gaps = 23/337 (6%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   +   P AV S +   V  IA G  H   +T  G V+ WG    G+LG G  ++ S 
Sbjct: 452 GTTTNRSTPGAV-SGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRST 510

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P  +  L +  V  +A G++HTCA+  SG ++ WG +N   G LG G+      P  + G
Sbjct: 511 PGAVGGLPS-GVTAIAAGDYHTCALMSSGGVWCWGLNN--RGQLGDGSYTDSSTPVAVGG 567

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
              G  V +++ G +HT  +T +  ++ +G  + G LG G   + STP  V  L    T 
Sbjct: 568 LPSG--VMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSGVTA 625

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            AA G +HT A+             SSG ++ WG    G+LG G    R  P  V+ L  
Sbjct: 626 IAA-GNYHTCALT------------SSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGL-P 671

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIA 514
                ++ G   T ALT +G V+  G   YGQLGD    N   P  V G    + V  IA
Sbjct: 672 SGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSGL--PSGVTAIA 729

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            G YH   LT    V  WG   +G+LG G    R  P
Sbjct: 730 AGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTP 766



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 6/171 (3%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   +   P AV S +   V  IA G  H   +T  G V+ WG  L G+LG G  ++ S 
Sbjct: 605 GTTTNRSTPVAV-SGLPSGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRST 663

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P  +  L +  V  +A G+ HTCA+T SG ++ WG  +  +G LG G   +   P  ++G
Sbjct: 664 PGAVSGLPS-GVTAIAAGDEHTCALTGSGGVWCWG--DNYYGQLGDGTTTNRSTPGAVSG 720

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
              G  V++++ G +HT  +T +G +  +G+   G LG G  +  +TP +V
Sbjct: 721 LPSG--VTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDV 769


>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 182/368 (49%), Gaps = 41/368 (11%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ IACGG H   +T+ G V++ G    G+LG   +   S  + ++         ++ G 
Sbjct: 132 LKGIACGGAHTLFLTESGRVYATGLNNFGQLGISDEKRFS-TEPVEVRIPKEAMHISAGY 190

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           +H+C VT  G++Y WG  SN   G LG  +  ++ LP K++  L+GI +   + G  H+ 
Sbjct: 191 NHSCVVTADGELYMWGVNSNGQLG-LGKKSAKAVHLPTKVD-SLDGIVIKRAALGSDHSI 248

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDR---------ISVSTPREVDSLKGLRTVRAACGVWHT 404
            V   G++F++GDG  G LGHG            S  TPR +  L+G++    A G+ H+
Sbjct: 249 AVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHS 308

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
           A V E            +G ++ +G+    R+  G+      P+ ++ L++    +V+CG
Sbjct: 309 ACVDE------------NGAVYIFGERATNRVSFGEANKATTPSLISTLLDCE--EVACG 354

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
              T  LT  G +Y+ GS   G LG+   +   LP RVEG  +K+ V +++CG  H A +
Sbjct: 355 GYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAI 414

Query: 524 TSRTEVYTWGKGAN------------GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            S   ++TWG G +            G+LGHG   D   P+ ++  ++ +V  + CG + 
Sbjct: 415 -SGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVSCGFNH 473

Query: 572 TAAICLHK 579
           T AI  +K
Sbjct: 474 TGAILEYK 481



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 159/334 (47%), Gaps = 36/334 (10%)

Query: 257 WGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 315
           WG    GRLG G +DS  S P    +     ++ +ACG  HT  +T SG +Y  G +N  
Sbjct: 102 WGNGDFGRLGLGNLDSQWS-PVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNN-- 158

Query: 316 FGLLGHGNEMSLWL-PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 374
           FG LG  +E      P ++  P E +H+S+   G  H+ VVT+ G+L+ +G  + G LG 
Sbjct: 159 FGQLGISDEKRFSTEPVEVRIPKEAMHISA---GYNHSCVVTADGELYMWGVNSNGQLGL 215

Query: 375 GDR--ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           G +   +V  P +VDSL G+   RAA G  H+ AV +             G++F+WGDG 
Sbjct: 216 GKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVAD------------GGEVFSWGDGR 263

Query: 433 RGRLGHGDKEARL---------VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            GRLGHG +   L          P  +  L       V+ G   +  +   G VY  G  
Sbjct: 264 SGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGER 323

Query: 484 VYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
              ++   +AN    P+ +   L     EE+ACG YH  VLT   ++Y+WG   NG LG+
Sbjct: 324 ATNRVSFGEANKATTPSLISTLLD---CEEVACGGYHTCVLTKGGDLYSWGSNENGCLGN 380

Query: 543 GDTDDRNFPSLVEALKDKQ-VKSIVCGTSFTAAI 575
           G T   + P  VE    K  V  + CG   TAAI
Sbjct: 381 GSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAI 414



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/233 (36%), Positives = 127/233 (54%), Gaps = 20/233 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDS-FVPKAVESAVVLDVQNIACGGRHAALV 248
           G+VF WG+    G LG G H S     +K  S   P+ ++    + V+++A G  H+A V
Sbjct: 254 GEVFSWGDGR-SGRLGHG-HESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACV 311

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            + G V+ +GE    R+  G  +  + P LI  L  ++ E VACG +HTC +T  GD+Y+
Sbjct: 312 DENGAVYIFGERATNRVSFGEANKATTPSLISTL--LDCEEVACGGYHTCVLTKGGDLYS 369

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG--- 365
           WG SN N G LG+G+     LP+++ GP     VS VSCG  HTA + S G +FT+G   
Sbjct: 370 WG-SNEN-GCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAI-SGGAIFTWGWGG 426

Query: 366 -DGTFGV--------LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             GTF V        LGHG  +    P ++D  + ++ V+ +CG  HT A++E
Sbjct: 427 SHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVSCGFNHTGAILE 479


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 178/386 (46%), Gaps = 49/386 (12%)

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +   +  GGI         K D F+ K V        +++ CG RH   V   G V
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKV--------RDVGCGLRHTVFVLDDGTV 55

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           ++ G    G+LGH  +     P+ + AL   N+  V+CGE HT A+   G +Y WG  S+
Sbjct: 56  YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113

Query: 314 CNFGLLGHGNEMSLWLPKK-LNGPLE-GIHVS----SVSCGPW------------HTA-- 353
              GLLG  +E  + +P+K +  P++  I +     + S   W            H A  
Sbjct: 114 GQLGLLG--SEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAES 171

Query: 354 --VVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
             V  SA ++F +G   +G LG G D    ++P+ + SL G+  ++ A G          
Sbjct: 172 GQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAG---------- 221

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             G+ S     SG +F WG    G+LG  D+  R VP  + +L       + CG   T A
Sbjct: 222 --GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAA 279

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEV 529
           LT  G V+T G+  YGQLG    + ++  R   +L  + V +IACG  H  A + S   +
Sbjct: 280 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRI 339

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVE 555
           Y++G G NG+LG G T +R  P  V+
Sbjct: 340 YSFGLGGNGQLGTGSTSNRKSPFTVK 365



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 156/340 (45%), Gaps = 26/340 (7%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  D   N  V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DG 367
             CN  G LGH  E S   P+++   L+  ++ +VSCG  HT  +   GQ++ +G   DG
Sbjct: 60  --CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVR-------AACGVWHTAAVVEVM----VGSSS 416
             G+LG  + I V  PR+   +   + +R       A+   W +    E+     +  S 
Sbjct: 115 QLGLLGSEECIRV--PRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESG 172

Query: 417 SSNCSSGKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
               S+ ++F WG    G+LG G D + +  P  + +L+   F QV+ G + +  LT +G
Sbjct: 173 QVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG 232

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            ++  G   +GQLG    N +    +   L    +  I CG+ H A LT    V+T+G G
Sbjct: 233 AIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAG 292

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G+LGH  T     P  V  L    V  I CG   T+A 
Sbjct: 293 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAF 332



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 136/309 (44%), Gaps = 45/309 (14%)

Query: 225 KAVESAVVLDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPK--- 277
           K  E  V LD QNI   +CG  H   +  +G+V++WG +  G+LG  G +  +  P+   
Sbjct: 73  KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSI 132

Query: 278 LIDALKNINV------------------ELVA---CGEHHTCAVTLSGDMYTWGGSNCNF 316
            +   KNI +                  EL       E    AV+ S +++ WG +   +
Sbjct: 133 FMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAVSAS-EVFCWGQN--KY 189

Query: 317 GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
           G LG G +       +L   L GI    V+ G  H+ V+T +G +F +G   FG LG  D
Sbjct: 190 GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 249

Query: 377 RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL 436
                 P  + SL+  + V   CG  HTAA+ +             G +FT+G G  G+L
Sbjct: 250 ENDRYVPYLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFTFGAGGYGQL 297

Query: 437 GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKAN 494
           GH      + P  V  L+     Q++CG   T A   ++G +Y+ G    GQLG    +N
Sbjct: 298 GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 357

Query: 495 GKLPTRVEG 503
            K P  V+G
Sbjct: 358 RKSPFTVKG 366



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 13/200 (6%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S  +VF WG+    G LG GI      +        P+ ++S + +    +A GG H+ +
Sbjct: 177 SASEVFCWGQ-NKYGQLGLGIDCKKQTS--------PQLIKSLLGIPFMQVAAGGAHSFV 227

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +T  G +F WG    G+LG   ++D   P L+ +L++  +  + CGE HT A+T  G ++
Sbjct: 228 LTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVF 287

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGD 366
           T+G     +G LGH +      P+K+   L G  V+ ++CG  HT A V S+G++++FG 
Sbjct: 288 TFGAG--GYGQLGHNSTSHEINPRKV-FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGL 344

Query: 367 GTFGVLGHGDRISVSTPREV 386
           G  G LG G   +  +P  V
Sbjct: 345 GGNGQLGTGSTSNRKSPFTV 364


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 175/386 (45%), Gaps = 36/386 (9%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           +  WG+   DG LG G+ R+  +     + F  + +        + I CGG+H+  +   
Sbjct: 1   MLCWGKAK-DGQLGIGVERNPMFEPRNCNVFTGRGL--------KEIVCGGQHSVFLLHD 51

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G V++ G    G+LGH        P+ + AL    + LV+CG+ H+ AV   G ++ WG 
Sbjct: 52  GSVYTCGSNSCGQLGHNKPGIT--PEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGA 109

Query: 312 SNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                G LG G  E ++ +P+ L   L    ++ V CG  H   ++  GQLFT+G  T G
Sbjct: 110 GEE--GQLGLGTTETAVRIPR-LIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSG 166

Query: 371 VLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG G    S   P+ + SL G+   +   G            G  S +   SG +F WG
Sbjct: 167 QLGLGKGEPSKLFPQPLKSLAGIPLAKITAG------------GDHSFALSLSGAVFGWG 214

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
               G+LG  D + R VP  +  L       +SCG   T ALT  G ++T G   +GQLG
Sbjct: 215 KNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLG 274

Query: 490 D-PKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHG--DT 545
               AN  LP RV  +L    V +I CG +H +A   S   VY +G  ++G+LG G    
Sbjct: 275 HGSTANELLPRRVL-ELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVLSA 333

Query: 546 DDRNFP---SLVEALKDKQVKSIVCG 568
           D   +P   S +       V  I CG
Sbjct: 334 DKSPYPLKTSFLSGSIHGTVTKITCG 359



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 154/326 (47%), Gaps = 22/326 (6%)

Query: 254 VFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           +  WG+   G+LG GV+ + +  P+  +      ++ + CG  H+  +   G +YT G +
Sbjct: 1   MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSN 60

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
           +C  G LGH       +  +  G L+   ++ VSCG  H+  V   GQ+F +G G  G L
Sbjct: 61  SC--GQLGHNKP---GITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQL 115

Query: 373 GHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           G G    +V  PR +  L   R  +  CG  H  A+               G+LFTWG  
Sbjct: 116 GLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIAL------------SKDGQLFTWGQN 163

Query: 432 DRGRLGHGDKE-ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG- 489
             G+LG G  E ++L P  + +L      +++ G   + AL+ +G V+  G    GQLG 
Sbjct: 164 TSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGL 223

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
           +   +  +P  ++   ++  V  I+CG+ H A LT    ++T+G G+ G+LGHG T +  
Sbjct: 224 NDIQDRAVPCHIKFLRSQKVVH-ISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANEL 282

Query: 550 FPSLVEALKDKQVKSIVCGTSFTAAI 575
            P  V  L   +V  I CG   T A 
Sbjct: 283 LPRRVLELMGTEVSQITCGRHHTLAF 308



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 140/302 (46%), Gaps = 27/302 (8%)

Query: 141 GSVNSLSSGGSDGRTGHLK-GLSGDTFRVSLSSAVSSSSQGSGHDDG-DSLGDVFIWGEC 198
           GSV +  S  S G+ GH K G++ +      +  ++  S G  H    +  G VF WG  
Sbjct: 52  GSVYTCGSN-SCGQLGHNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWG-A 109

Query: 199 TGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 258
             +G LG G   +           +P+ ++      +  + CG +H   ++K G++F+WG
Sbjct: 110 GEEGQLGLGTTETAVR--------IPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWG 161

Query: 259 EELGGRLGHGV-DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG 317
           +   G+LG G  +     P+ + +L  I +  +  G  H+ A++LSG ++ WG +    G
Sbjct: 162 QNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKA--G 219

Query: 318 LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 377
            LG  +     +P  +   L    V  +SCG  HTA +T  G LFTFGDG++G LGHG  
Sbjct: 220 QLGLNDIQDRAVPCHIKF-LRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGST 278

Query: 378 ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG 437
            +   PR V  L G    +  CG  HT A              SSG ++ +G    G+LG
Sbjct: 279 ANELLPRRVLELMGTEVSQITCGRHHTLAFAP-----------SSGGVYAFGCNSHGQLG 327

Query: 438 HG 439
            G
Sbjct: 328 TG 329


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 174/371 (46%), Gaps = 35/371 (9%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFV-PKAVESAVVLDVQNIACGGRHAALVTK 250
           +F WG    +G LG G        G++ D  + PK         ++ ++CG +H   V  
Sbjct: 1   MFCWGAAR-NGELGLG--------GIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLA 51

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           +G V++ G    G+LG   D     P +I AL   +++ V+CG++H   V     +++WG
Sbjct: 52  EGTVYTCGSNDYGQLGQ--DKGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWG 109

Query: 311 GSNCNFGLLGH-----GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
             +C  G LGH     GN        ++   L  + +  V+CG  H+  +++ G++F++G
Sbjct: 110 YDDC--GQLGHTLEAGGNNSR---RPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWG 164

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
           + + G LG G   +   P+E+ SL G+   +   G            GS S     SG +
Sbjct: 165 NNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAG------------GSHSFVLSKSGAV 212

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           F +G    G+LG GD   R  PT V +L       +SCG   T  LT  G V T G+  Y
Sbjct: 213 FGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSY 272

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGD 544
           GQLG    N +   R   +L    V ++ACG  H +A + S   +Y++G G NG+LG   
Sbjct: 273 GQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKG 332

Query: 545 TDDRNFPSLVE 555
           T + N P  V+
Sbjct: 333 TTNCNTPITVD 343



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 151/327 (46%), Gaps = 24/327 (7%)

Query: 254 VFSWGEELGGRLGHG-VDSDVS-HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +F WG    G LG G ++ DV   PK         +  V+CG  HT  V   G +YT G 
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           ++  +G LG         P  +   L+   +  VSCG +H  VV    Q+F++G    G 
Sbjct: 61  ND--YGQLGQDKGHKR--PTVITA-LDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQ 115

Query: 372 LGHGDRI---SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           LGH       +   PR V  L  L+ V+ ACG  H+ A+             + G++F+W
Sbjct: 116 LGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLAL------------SNDGRIFSW 163

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G+   G+LG G  + +  P  + +L    FCQ+  G S +  L+ +G V+  G   +GQL
Sbjct: 164 GNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQL 223

Query: 489 G-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G     + K PT V+  L    V  I+CG+ H AVLT    V T+G G+ G+LGH   + 
Sbjct: 224 GLGDTGDRKYPTHVK-SLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNH 282

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAA 574
              P  V  L   +V  + CG   T A
Sbjct: 283 EALPRKVFELMGLEVTQLACGRMHTMA 309



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 131/281 (46%), Gaps = 30/281 (10%)

Query: 306 MYTWGGS-NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           M+ WG + N   GL G   ++ L   ++  G  + +    VSCG  HT  V + G ++T 
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMR--EVSCGRQHTVFVLAEGTVYTC 58

Query: 365 GDGTFGVLGHGD---RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           G   +G LG      R +V T  +  S++     + +CG +H   V +            
Sbjct: 59  GSNDYGQLGQDKGHKRPTVITALDTQSIQ-----QVSCGDYHNLVVND------------ 101

Query: 422 SGKLFTWGDGDRGRLGH-----GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
             ++F+WG  D G+LGH     G+   R  P  V  L      QV+CG   ++AL+  G 
Sbjct: 102 KYQVFSWGYDDCGQLGHTLEAGGNNSRR--PRMVKELSSLQIVQVACGGKHSLALSNDGR 159

Query: 477 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           +++ G+  +GQLG      +   +    LT     +I  G  H  VL+    V+ +G+  
Sbjct: 160 IFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNT 219

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            G+LG GDT DR +P+ V++L+  +V  I CG   TA + L
Sbjct: 220 FGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTL 260


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 179/378 (47%), Gaps = 26/378 (6%)

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG+ + DG LG G     S     +D ++P          +  +  GG H+  +T  G
Sbjct: 59  FAWGDNS-DGQLGNGTTTGSS---TPVDVYLPAGTT------ITAVTAGGLHSLALTSTG 108

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
            V +WG    G+LG+G  ++ S P  +D      +  +A G  H+ A+T +G +  W G 
Sbjct: 109 AVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSAGTVLAW-GE 167

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
           N + G LG+G   ++  P  ++ P  G+ +++V+ G +H+  VTS G +  +GD + G L
Sbjct: 168 NLH-GQLGNGGTTNMSTPVGVSLP-AGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQL 225

Query: 373 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           G+G     STP +VD            G   TA    V   + S +  S+G    WG+  
Sbjct: 226 GNGTTTGSSTPVDVD---------LPAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNA 276

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G+LG+GD   R  P  V          V+ G   ++ALT  G V   G  V GQLG+  
Sbjct: 277 DGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGT 336

Query: 493 ANGKLPTRVEGKL-TKNFVEEIACG-DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
             G   T V+  L T   +  IA G D+ +A LT+   V  WG+  +G+LG+GDT +R+ 
Sbjct: 337 TTGS-STPVDVDLPTGATINAIAAGFDFGLA-LTTAGAVVAWGRNVSGQLGNGDTINRST 394

Query: 551 PSLVEALKDKQVKSIVCG 568
           P  V+      + ++  G
Sbjct: 395 PVDVDLPAGVTITAVAAG 412



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 148/328 (45%), Gaps = 26/328 (7%)

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 314
           F+WG+   G+LG+G  +  S P  +       +  V  G  H+ A+T +G +  WG    
Sbjct: 59  FAWGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAWG---R 115

Query: 315 NF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
           NF G LG+G+  +   P  ++ P  G  +++++ G +H+  +TSAG +  +G+   G LG
Sbjct: 116 NFSGQLGNGDTTNRSTPVDVDLP-AGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQLG 174

Query: 374 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
           +G   ++STP  V    G+     A G +H+ AV             S+G +  WGD   
Sbjct: 175 NGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAV------------TSTGAVLAWGDNSN 222

Query: 434 GRLGHGDKEARLVPTCV-----AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G+LG+G       P  V       +           HSL  ALT+TG     G+   GQL
Sbjct: 223 GQLGNGTTTGSSTPVDVDLPAGTTITAVAAGVAGAAHSL--ALTSTGAALAWGNNADGQL 280

Query: 489 GDPKANGKLPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G+     +  T V+  L     +  +A G  H   LT+   V  WG+  +G+LG+G T  
Sbjct: 281 GNGDTTNR-STPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTG 339

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            + P  V+      + +I  G  F  A+
Sbjct: 340 SSTPVDVDLPTGATINAIAAGFDFGLAL 367



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 132/301 (43%), Gaps = 19/301 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           +  IA G  H+  +T  G V +WGE L G+LG+G  +++S P  +     + +  VA G 
Sbjct: 143 ITAIAAGAFHSLALTSAGTVLAWGENLHGQLGNGGTTNMSTPVGVSLPAGVTITAVAAGA 202

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWH 351
            H+ AVT +G +  W G N N G LG+G       P  ++ P  G  ++   +   G  H
Sbjct: 203 FHSLAVTSTGAVLAW-GDNSN-GQLGNGTTTGSSTPVDVDLP-AGTTITAVAAGVAGAAH 259

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +  +TS G    +G+   G LG+GD  + STP +VD   G+     A G  H+ A+    
Sbjct: 260 SLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLAL---- 315

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                    ++G +  WG    G+LG+G       P  V          ++ G    +AL
Sbjct: 316 --------TAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAGFDFGLAL 367

Query: 472 TTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
           TT G V   G  V GQLG+    N   P  V+           A G + +A++   T   
Sbjct: 368 TTAGAVVAWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMALVALPTSTT 427

Query: 531 T 531
           T
Sbjct: 428 T 428



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 2/149 (1%)

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
           +S   F WGD   G+LG+G       P  V          V+ G   ++ALT+TG V   
Sbjct: 54  ASDTYFAWGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAW 113

Query: 481 GSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           G    GQLG+    N   P  V+       +  IA G +H   LTS   V  WG+  +G+
Sbjct: 114 GRNFSGQLGNGDTTNRSTPVDVD-LPAGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQ 172

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
           LG+G T + + P  V       + ++  G
Sbjct: 173 LGNGGTTNMSTPVGVSLPAGVTITAVAAG 201


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 149/309 (48%), Gaps = 17/309 (5%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACG 293
           +Q I+ G  H   ++  G +++ G    G+LG   +S D + P L+D  K   +  +ACG
Sbjct: 37  IQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACG 96

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
             H+ A+   G  ++WG  +   G LG           K+   L   +V  V+CG +HT 
Sbjct: 97  LQHSMALDEWGQPFSWGSDS--MGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTV 154

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISV-STPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           V+T+ G L+ +G  ++G  G G+R +  +TP+ + S+ G+     ACG  HT A+ +   
Sbjct: 155 VLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQ--- 211

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                    SG +F WG    G+LG  D+E+R  PT +  L     C +SCG   T  LT
Sbjct: 212 ---------SGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLT 262

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G V+T G+  YGQ G      +L  R   +L  + V ++ACG  H+        +   
Sbjct: 263 LDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELMGSTVTQVACGRRHMLCRVGE-RILAC 321

Query: 533 GKGANGRLG 541
           G GA G+LG
Sbjct: 322 GYGARGQLG 330



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 136/280 (48%), Gaps = 17/280 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS-HPKLIDAL 282
           P  V++     +  IACG +H+  + + G+ FSWG +  G+LG  + S     PK+I  L
Sbjct: 79  PVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTL 138

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
              NV  VACG +HT  +T +GD+Y WG +  ++G  G GN  +     +    + GI +
Sbjct: 139 ATKNVIQVACGSYHTVVLTNNGDLYAWGAN--SYGQCGLGNRSNKETTPQALSSILGIPI 196

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
           + ++CG  HT  ++ +G +F +G  + G LG  DR S   P  + +L+ ++    +CG  
Sbjct: 197 ALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGED 256

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
            TA +               G +FT G G+ G+ GHG+ +  LVP  V  L+     QV+
Sbjct: 257 FTAFLT------------LDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELMGSTVTQVA 304

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRV 501
           CG    +       +   G    GQLG P  A   +PT V
Sbjct: 305 CGRRHMLC-RVGERILACGYGARGQLGCPHMAFALVPTPV 343



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 15/275 (5%)

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           M+ WG +  +   +     + L +   L+   E  H+  +S G +HT  +++ G L+T G
Sbjct: 1   MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCG 60

Query: 366 DGTFGVLG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
               G LG   +    ++P  VD+ KG      ACG+ H+ A+ E             G+
Sbjct: 61  SNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDE------------WGQ 108

Query: 425 LFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            F+WG    G+LG      A+  P  +  L   N  QV+CG   TV LT  G +Y  G+ 
Sbjct: 109 PFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGAN 168

Query: 484 VYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            YGQ G   ++N +   +    +    +  IACG  H   L+    V+ WGK ++G+LG 
Sbjct: 169 SYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGL 228

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            D + R +P+ ++ L++ +V  I CG  FTA + L
Sbjct: 229 QDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTL 263



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 135/289 (46%), Gaps = 30/289 (10%)

Query: 164 DTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV 223
           DTF+    S ++   Q S     D  G  F WG     G LG  +   GS+A  K     
Sbjct: 83  DTFKGCTLSTIACGLQHSM--ALDEWGQPFSWGS-DSMGQLGSNL---GSHAQDK----- 131

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV-SHPKLIDAL 282
           PK +++    +V  +ACG  H  ++T  G++++WG    G+ G G  S+  + P+ + ++
Sbjct: 132 PKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSI 191

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
             I + L+ACG +HT A++ SG ++ WG +  + G LG  +  S   P  L   L  + V
Sbjct: 192 LGIPIALIACGSNHTFALSQSGAVFGWGKN--SHGQLGLQDRESRCYPTHLKT-LRNVKV 248

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
             +SCG   TA +T  G +FT G G +G  GHG+      PR+V  L G    + ACG  
Sbjct: 249 CHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELMGSTVTQVACGRR 308

Query: 403 HTAAVVEVMVGSSSSSNCSSG-KLFTWGDGDRGRLGHGDKEARLVPTCV 450
           H                C  G ++   G G RG+LG       LVPT V
Sbjct: 309 HML--------------CRVGERILACGYGARGQLGCPHMAFALVPTPV 343



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 148/323 (45%), Gaps = 25/323 (7%)

Query: 254 VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           +F WG     EL       +D  V  P L    ++ +++ ++ GE HT  ++ +G +YT 
Sbjct: 1   MFCWGNATHHELCIECPGNLDL-VIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTC 59

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G +    G LG     +      L    +G  +S+++CG  H+  +   GQ F++G  + 
Sbjct: 60  GSNEV--GQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSM 117

Query: 370 GVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG      +   P+ + +L     ++ ACG +HT  +             ++G L+ W
Sbjct: 118 GQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLT------------NNGDLYAW 165

Query: 429 GDGDRGRLGHGDKEAR-LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           G    G+ G G++  +   P  +++++      ++CG + T AL+ +G V+  G   +GQ
Sbjct: 166 GANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQ 225

Query: 488 LGDPKANGK-LPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           LG      +  PT +  K  +N  V  I+CG+   A LT    V+T G G  G+ GHG+T
Sbjct: 226 LGLQDRESRCYPTHL--KTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNT 283

Query: 546 DDRNFPSLVEALKDKQVKSIVCG 568
            D   P  V  L    V  + CG
Sbjct: 284 KDELVPRKVMELMGSTVTQVACG 306


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 182/389 (46%), Gaps = 34/389 (8%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV-PKAVESAVVLDVQNIACGGRHAALVT 249
           DV+ WG            + S   A +  D  V PK V+S    + Q +  G      V+
Sbjct: 285 DVYAWGS-----------NSSHQLAELGSDKIVFPKKVKS--FGNSQMLEAGQYCTFAVS 331

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLI--DALKNI-NVELVACGEHHTCAVTLSGDM 306
             G V S G+   GRLG G  ++ S  K I  D  + I  +      + HT A+T  G +
Sbjct: 332 GDGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTEGCI 391

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           ++WG  +  +G LGHG+ ++   PK + GPL    V  VS G  H+A VT  GQLFT+G+
Sbjct: 392 FSWGDGD--YGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGE 449

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G +G LG GD  S + P  V  +    +V   CG  HT  + +               ++
Sbjct: 450 GDYGRLGLGDNTSRNVPVLVKDIASAGSV--VCGSSHTLVLAQ-----------DGLTVW 496

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           ++G GD G+LGHGD      P  + ++    F ++  G   ++AL  +G V++ G     
Sbjct: 497 SFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACL 556

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
             G P A    PT ++ +LT   V +I  GD H   LT   EVY WG  A G+ G G T+
Sbjct: 557 GCGSPDATFMKPTLID-ELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHTN 615

Query: 547 D-RNFPSLVEALKDKQVKSIVCGTSFTAA 574
              + P+ V+ L +  +  I  GTS + A
Sbjct: 616 SPISVPTQVQQLNNVTIHQISAGTSHSIA 644



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 144/318 (45%), Gaps = 37/318 (11%)

Query: 290 VACGEHHTCAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
           ++C E  T +V ++  D+Y WG SN +  L   G++  +  PKK+           +  G
Sbjct: 269 ISCTETATKSVDMNNCDVYAWG-SNSSHQLAELGSD-KIVFPKKVKSFGNS---QMLEAG 323

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTA 405
            + T  V+  G + + G G++G LG GD  + ST + +  D  + +R + ++ G   HT 
Sbjct: 324 QYCTFAVSGDGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTL 383

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA-LVEPNFCQVSCG 464
           A+             + G +F+WGDGD G+LGHG       P  +   L       VS G
Sbjct: 384 ALT------------TEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAG 431

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE--EIACGDYHVAV 522
           +  +  +T  G ++T G   YG+LG     G   +R    L K+      + CG  H  V
Sbjct: 432 YRHSACVTQEGQLFTWGEGDYGRLG----LGDNTSRNVPVLVKDIASAGSVVCGSSHTLV 487

Query: 523 LTSR-TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----L 577
           L      V+++G G NG+LGHGDT     P ++E++       +  G+ ++ A+     +
Sbjct: 488 LAQDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSGQV 547

Query: 578 HKWVSGVDQSMCSGCRIP 595
             W  G     C GC  P
Sbjct: 548 FSWGCGA----CLGCGSP 561


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 177/395 (44%), Gaps = 46/395 (11%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +V++WG  +   +  G + +            VPK   S      Q I  G     ++  
Sbjct: 365 EVYVWGSNSSHQLAEGSMDKI----------LVPKLATS--FGSAQQIEAGQYCTFVIFP 412

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE---------LVACGEHHTCAVT 301
            G V + G+   GRLG G  ++ +       LK +N +              + HT A+T
Sbjct: 413 DGFVHACGKGSYGRLGLGDSTNQTQ------LKRLNFDNECLVKSVSSSKGSDGHTLALT 466

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
           L G +Y+WG  + ++G LGHGN  +  +PK + G L    V  ++ G  H+A VT  G+L
Sbjct: 467 LDGKVYSWG--DGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGEL 524

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +T+G+G +G LGHGD  S + P +V  +  +  V  ACG  HT  V +            
Sbjct: 525 YTWGEGDYGRLGHGDNNSRNVPVQVKDVANVGQV--ACGSAHTVCVSQ-----------D 571

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
              ++++G GD G+LGH D      P  + AL      +V CG   ++ALT+TG VY  G
Sbjct: 572 GQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWG 631

Query: 482 S-PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
             P  G  G   A    P ++   L  + V +I+ GD H   LT    VY WG  + G+ 
Sbjct: 632 CGPSLGT-GSVDATSATP-KLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQC 689

Query: 541 GHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G G  T     P  V  L    V  I  GTS T A
Sbjct: 690 GQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVA 724



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 134/277 (48%), Gaps = 26/277 (9%)

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           ++Y WG ++ +   L  G+   + +PK          + +   G + T V+   G +   
Sbjct: 365 EVYVWGSNSSH--QLAEGSMDKILVPKLATSFGSAQQIEA---GQYCTFVIFPDGFVHAC 419

Query: 365 GDGTFGVLGHGDRISVSTPREVD---SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           G G++G LG GD  + +  + ++            +     HT A+              
Sbjct: 420 GKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALT------------L 467

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCV-AALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            GK+++WGDGD G+LGHG+ + + +P  V  AL     C ++ G+  + A+T  G +YT 
Sbjct: 468 DGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTW 527

Query: 481 GSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANG 538
           G   YG+LG    N + +P +V  K   N V ++ACG  H V V      V+++G G NG
Sbjct: 528 GEGDYGRLGHGDNNSRNVPVQV--KDVAN-VGQVACGSAHTVCVSQDGQTVWSFGSGDNG 584

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LGH DT+    P ++EAL+   ++ + CG+  + A+
Sbjct: 585 KLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLAL 621



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 15/131 (11%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G V++WG C     LG G         V   S  PK + +     V +I+ G  H   
Sbjct: 623 STGQVYVWG-CGPS--LGTG--------SVDATSATPKLLLALQSHSVVDISVGDSHCVA 671

Query: 248 VTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVT---LS 303
           +T+   V++WG    G+ G G   + ++ PK +  L  + V  ++ G  HT A T   + 
Sbjct: 672 LTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVAWTALPMD 731

Query: 304 GDMYTWGGSNC 314
             + +W  + C
Sbjct: 732 RQVVSWYRAYC 742


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 165/350 (47%), Gaps = 27/350 (7%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV---SHPKLIDALKNINVELV 290
           +V ++A G  H  L+   GEV++ G    G+ G G    V   +   +    K + V   
Sbjct: 265 EVVDVAAGNEHTVLLCSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQVHAY 324

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
             G  HT  V   G M ++G    N+ G LG GN  S  +PK + G L GI V+  SC  
Sbjct: 325 N-GCEHTLVVLDDGQMMSFG---YNYRGQLGQGNTSSEPVPKPVRG-LNGIRVTQASCSY 379

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT-AAVV 408
           +H+ +    G+++TFG   FG LG GD I    P  V+SL+G R    ACG +HT  + +
Sbjct: 380 YHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTL 439

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE-PNFCQVSCGHSL 467
           E+ V S              G  D G+LG    E++     V   ++      V CG+  
Sbjct: 440 EIGVQSC-------------GKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYH 486

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTS 525
           T+ LT   HV+  G   YGQLG      ++  PT +EG   K+ V  I+ G YH  ++ +
Sbjct: 487 TIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKH-VYRISAGCYHTVLIDA 545

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              ++ +G+  +G+LG GDT++R+ P  V     K++  +  G   T  +
Sbjct: 546 DGMLFVFGRNHHGQLGTGDTNERHSPFPVSTFLGKRIAKVAAGFYHTIVL 595



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 155/327 (47%), Gaps = 19/327 (5%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV++ G+   G LGH          L+   +   V  VA G  HT  +  +G++YT  G 
Sbjct: 232 EVWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLCSTGEVYT-AGY 290

Query: 313 NCNFGLLGHGNEMSLWLPKK--LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           N N G  G G    + +  +  ++G  + + V + + G  HT VV   GQ+ +FG    G
Sbjct: 291 NDN-GQCGQGTTQRVGVLTRVPIDGGRKAVQVHAYN-GCEHTLVVLDDGQMMSFGYNYRG 348

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LG G+  S   P+ V  L G+R  +A+C  +H+               C +G+++T+G 
Sbjct: 349 QLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIA------------CDNGEVYTFGR 396

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG- 489
            D G+LG GD   R +P  V +L       ++CG   TV  T    V + G   YGQLG 
Sbjct: 397 NDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGL 456

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
           +   + +    V+GKL    V  + CG YH  VLT+   V+ +G+   G+LG G T  R 
Sbjct: 457 ESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRV 516

Query: 550 F-PSLVEALKDKQVKSIVCGTSFTAAI 575
           F P+++E  ++K V  I  G   T  I
Sbjct: 517 FGPTIIEGAQEKHVYRISAGCYHTVLI 543



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 115/251 (45%), Gaps = 15/251 (5%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           VPK V     + V   +C   H+ +    GEV+++G    G+LG G   D   P L+++L
Sbjct: 360 VPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESL 419

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +   +  +ACG++HT   TL   + + G ++  +G LG  +  S      + G L+G  V
Sbjct: 420 RGQRITTLACGQYHTVVSTLEIGVQSCGKND--YGQLGLESTESQRKFVAVKGKLDGAQV 477

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGV 401
             V CG +HT V+T+   +F FG   +G LG G     V  P  ++  +     R + G 
Sbjct: 478 RHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGC 537

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
           +HT  +             + G LF +G    G+LG GD   R  P  V+  +     +V
Sbjct: 538 YHTVLID------------ADGMLFVFGRNHHGQLGTGDTNERHSPFPVSTFLGKRIAKV 585

Query: 462 SCGHSLTVALT 472
           + G   T+ LT
Sbjct: 586 AAGFYHTIVLT 596



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 20/223 (8%)

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
           +++T G  ++G LGH D  +  T   V   +G   V  A G  HT  +            
Sbjct: 232 EVWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLL------------ 279

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV----SCGHSLTVALTTTG 475
           CS+G+++T G  D G+ G G  +   V T V         QV     C H+L V     G
Sbjct: 280 CSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVV--LDDG 337

Query: 476 HVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            + + G    GQLG    + + +P  V G L    V + +C  YH  +     EVYT+G+
Sbjct: 338 QMMSFGYNYRGQLGQGNTSSEPVPKPVRG-LNGIRVTQASCSYYHSVIACDNGEVYTFGR 396

Query: 535 GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
              G+LG GD  DR  P LVE+L+ +++ ++ CG   T    L
Sbjct: 397 NDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTL 439


>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
            purpuratus]
          Length = 1139

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 141/252 (55%), Gaps = 22/252 (8%)

Query: 289  LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL---WLPKKLNG-PLEGIHVSS 344
            ++ACG+ H  A+  +GD+YTWG    + G LG G+ MSL     P ++    + GIHV +
Sbjct: 776  VLACGQDHA-AIVANGDVYTWG--RAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRA 832

Query: 345  VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
            V+CG  HT  VT  G+L+++G  ++G LG GDR   S P  V++L G R +  ACG  HT
Sbjct: 833  VACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLHT 892

Query: 405  AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
              + +              +L+++G G  G+LGHGD E +++P  V  L +     +S G
Sbjct: 893  LVLTQ------------DQRLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAG 940

Query: 465  HSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDY-HVAV 522
            ++ + ALT  G V+  GS  +GQLG        +P R++  L+ + V  + CG Y ++A+
Sbjct: 941  YAHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKA-LSSHHVSILTCGYYSNIAI 999

Query: 523  LTSRTEVYTWGK 534
             ++  +VYTWGK
Sbjct: 1000 TSNPQKVYTWGK 1011



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 181/381 (47%), Gaps = 52/381 (13%)

Query: 231  VVLDVQNI-ACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKL-IDAL--KN 284
            ++L  QN+ ACG  HAA+V   G+V++WG    GRLG G  +  D   P L ++ L    
Sbjct: 769  LLLPTQNVLACGQDHAAIVAN-GDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHG 827

Query: 285  INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 344
            I+V  VACG+ HT AVT  G +Y+WG S  ++G LG G+      P  +   L G    S
Sbjct: 828  IHVRAVACGKEHTMAVTQEGKLYSWGSS--SYGQLGVGDRNVHSRPVAVEA-LSGQRCLS 884

Query: 345  VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
            V+CG  HT V+T   +L++FG G  G LGHGD      P+ V+ L     V  + G  H+
Sbjct: 885  VACGQLHTLVLTQDQRLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGYAHS 944

Query: 405  AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
             A+             + G+++ +G    G+LG G      VP  + AL   +   ++CG
Sbjct: 945  GALT------------NDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCG 992

Query: 465  HSLTVALTTTGH-VYTMG-SPVY--------------GQLGDPKANGKLPTRVEGKLTKN 508
            +   +A+T+    VYT G SP+                +  +P  + +  TR+     +N
Sbjct: 993  YYSNIAITSNPQKVYTWGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLPLEN 1052

Query: 509  F--------------VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 554
                           ++++     H  +LT+  ++Y+WG    G+LG G+   ++ P L+
Sbjct: 1053 QHLLPSLVPTNIQAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLI 1112

Query: 555  EALKDKQVKSIVCGTSFTAAI 575
               +D Q  ++  G+ F+ A+
Sbjct: 1113 NRSRDDQFVAVAAGSRFSLAV 1133



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 154/365 (42%), Gaps = 53/365 (14%)

Query: 190  GDVFIWGECTGDGILGGG--IHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            GDV+ WG    +G LG G  +   G    +++++     +       V+ +ACG  H   
Sbjct: 790  GDVYTWGR-AHEGRLGQGDIMSLDGRAPPLRVETLHMHGIH------VRAVACGKEHTMA 842

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
            VT++G+++SWG    G+LG G  +  S P  ++AL       VACG+ HT  + L+ D  
Sbjct: 843  VTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLHT--LVLTQDQR 900

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
             W       G LGHG+     LPK +N  L    +  +S G  H+  +T+ GQ++ FG  
Sbjct: 901  LWSFGWGVHGQLGHGDVEDQILPKLVN-QLSKCAIVGISAGYAHSGALTNDGQVWMFGSS 959

Query: 368  TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +FG LG G     + P  + +L         CG +   A+         +SN    K++T
Sbjct: 960  SFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAI---------TSN--PQKVYT 1008

Query: 428  WGDG---------------DRGRLGHGD--------------KEARLVPTCVAALVEPNF 458
            WG                    R  + D              +   L+P+ V   ++   
Sbjct: 1009 WGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLPLENQHLLPSLVPTNIQAPI 1068

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
             +++   +  + LTT G +Y+ GS   GQLG   + +  +P  +       FV   A   
Sbjct: 1069 KKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLINRSRDDQFVAVAAGSR 1128

Query: 518  YHVAV 522
            + +AV
Sbjct: 1129 FSLAV 1133


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 415 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 469

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 470 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 516

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 517 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 564

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 565 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 624

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 625 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 683

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 684 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 724



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 460 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 517

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 518 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 572

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 573 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 630

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       P KL   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 631 GGSDGCKTP-KLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 689

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 690 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 737

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 738 VTKPEPAALPGLDTKHIVGIACGPAQSFA 766


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 525

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 469 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 526

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 527 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 581

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 582 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 639

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 640 GGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 698

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 746

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 747 VTKPEPAALPGLDTKHIVGIACGPAQSFA 775


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 415 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 469

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 470 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 516

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 517 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 564

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 565 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 624

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 625 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 683

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 684 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 724



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 460 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 517

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 518 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 572

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 573 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 630

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 631 GGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 689

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 690 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 737

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 738 VTKPEPAALPGLDTKHIVGIACGPAQSFA 766


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 386 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 440

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 441 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 487

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 488 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 535

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 536 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 595

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 596 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 654

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 655 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 695



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 431 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 488

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 489 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 543

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 544 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG--DGDYGKLGR 601

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 602 GGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 660

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 661 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 708

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
             +  P  +  L   +   ++CG + + A
Sbjct: 709 VTKPEPAALPGLDTKHIVGIACGPAQSFA 737


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV  WG      +G    ++V  P   + L N+ V  +AC E     ++ +G +YT   +
Sbjct: 467 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 521

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +                P+ + G      + +++ S G  H   + + G+++++G G  G
Sbjct: 522 SDTLA------------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 568

Query: 371 VLGHGDRISVSTPREVDSLKGLR----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            LGHGD + +  P+ + +  G +     V  ACG  ++AA+             + G+L+
Sbjct: 569 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 616

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
           TWG G+ GRLGHG  E   +P  VA L       V+CG   + T+A+T  G V++ G   
Sbjct: 617 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGD 676

Query: 485 YGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YG+LG   ++G K P  +E KL    V ++ CG      LT   +VY+WGKG N RLGHG
Sbjct: 677 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 735

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
             +   +P L+E L+ K+V  +  G++   A+     +H W
Sbjct: 736 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 776



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 157/332 (47%), Gaps = 32/332 (9%)

Query: 152 DGRTGHLKGLSGDTFRVSLSSAVSSSS--QGSGHDDGD------SLGDVFIWGECTGDGI 203
           +GR  + +  + DT    L   ++S +  + + H DG       + G+V+ WG C   G 
Sbjct: 512 NGRV-YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG-CGDGGR 569

Query: 204 LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           LG G         V + +F  K     VV    +IACG  ++A +T +GE+++WG    G
Sbjct: 570 LGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAEGELYTWGRGNYG 624

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGH 321
           RLGHG   D + P L+  LK + V  VAC  G+  T AVT +G +++WG  + ++G LG 
Sbjct: 625 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWG--DGDYGKLGR 682

Query: 322 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           G       PK +   L+ + V  V CG   +  +T  GQ++++G G    LGHG    V 
Sbjct: 683 GGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 741

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
            P+ ++ L+G + +  A G  H  A+ E              ++ +WG  D+ +     +
Sbjct: 742 YPKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLR 789

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
             +  P  +  L   +   ++CG + + A ++
Sbjct: 790 VTKPEPAALPGLDTKHIVGIACGPAQSFAWSS 821


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 188/370 (50%), Gaps = 23/370 (6%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE-----ELGGRLGHGVD 270
           G  +D   PK VE+     V++++ G  H+ + TK G + S+G       + GRLGHG  
Sbjct: 92  GDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQ 151

Query: 271 SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWL 329
                P+ + +L  + +  VA G HH+  ++  G+++++G G +   G LGHG++    +
Sbjct: 152 RTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGID---GSLGHGDQARQLV 208

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           PK ++  L+   V  ++ G  H+ VV  +G +++FG G+ G LGHGD      P++++  
Sbjct: 209 PKLIS-SLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHF 267

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
                V+ A G  H+  + ++ V          G++ ++G    G+LG G   +R++ + 
Sbjct: 268 VQRPAVKVAAGGSHSLVLSKLYVLEQE------GRVLSFGQNSYGQLGLG-HFSRMIASP 320

Query: 450 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLT 506
               VE    ++  G   ++ LT  G VY+ G   +GQLG   D + N + PT ++  L 
Sbjct: 321 AQVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPE-PTLIQ-SLE 378

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
           +  + ++A G+    VL++   V+++G G NGRLG GD  +   P++V A     V +I 
Sbjct: 379 RERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVFA-AGHTVSAIS 437

Query: 567 CGTSFTAAIC 576
            G S +  + 
Sbjct: 438 AGYSHSLVVV 447



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 199/452 (44%), Gaps = 67/452 (14%)

Query: 74  PRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALS------DAVLYA 127
           P+   QRS   +S   SGG  ++   D L             +DK L       D   + 
Sbjct: 18  PKERKQRSDHNNSDHNSGGGDEEGIEDVL-------------VDKELMFLIFGPDLFTWK 64

Query: 128 APPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHD--- 184
             P  +L  +   G+V S       G   H+  L            V   S G  H    
Sbjct: 65  DLPDAVLRQQLVAGNVVSFGLADPSGHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVA 124

Query: 185 --DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGG 242
             DG  L   +       DG LG G  R+           +P+ V S   + +  +A G 
Sbjct: 125 TKDGGLLSFGYGSANVVVDGRLGHGDQRT---------QMIPRPVLSLSGVRIVKVAAGA 175

Query: 243 RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
            H+ +++ QG VFS+G  + G LGHG  +    PKLI +L+   V  +A G  H+  V  
Sbjct: 176 HHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAE 235

Query: 303 SGDMYTWG-GSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT---- 356
           SGD+Y++G GS    G LGHG+ +MSL +PKK+   ++   V  V+ G  H+ V++    
Sbjct: 236 SGDVYSFGLGSE---GALGHGDTDMSL-VPKKIEHFVQRPAV-KVAAGGSHSLVLSKLYV 290

Query: 357 --SAGQLFTFGDGTFGV--LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
               G++ +FG  ++G   LGH  R+ +++P +V                  AA VE+  
Sbjct: 291 LEQEGRVLSFGQNSYGQLGLGHFSRM-IASPAQVQV---------------EAAAVEIEA 334

Query: 413 GSSSSSNCSS-GKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
           G+  S   ++ G+++++G    G+LGHG D      PT + +L       V+ G++ ++ 
Sbjct: 335 GAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLV 394

Query: 471 LTTTGHVYTMGSPVYGQLGD-PKANGKLPTRV 501
           L+  G V++ G    G+LG   ++N   PT V
Sbjct: 395 LSAEGTVFSFGCGKNGRLGKGDESNATQPTVV 426



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 17/208 (8%)

Query: 373 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           GHGD +    P+ V++L   R    + G++H+    +             G L ++G G 
Sbjct: 90  GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATK------------DGGLLSFGYGS 137

Query: 433 R-----GRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
                 GRLGHGD+  +++P  V +L      +V+ G   ++ L+  G+V++ G  + G 
Sbjct: 138 ANVVVDGRLGHGDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGS 197

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           LG      +L  ++   L +  V +IA G  H  V+    +VY++G G+ G LGHGDTD 
Sbjct: 198 LGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDM 257

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              P  +E    +    +  G S +  +
Sbjct: 258 SLVPKKIEHFVQRPAVKVAAGGSHSLVL 285


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 194/421 (46%), Gaps = 50/421 (11%)

Query: 172 SAVSSSSQGSGH-----DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKA 226
           S + + S G+ H     DDG     V+ WG+    G LG G   S          ++P  
Sbjct: 275 SGIIAISSGNSHSLALKDDGT----VWAWGDNE-SGQLGDGTTNS---------KYIPSQ 320

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
           V+   +  + +I+CG  ++  +   G V+ WG+   G+LG G  +D +    +  L    
Sbjct: 321 VQG--LSGIVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDG-- 376

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSV 345
           V  +ACG +H+ A+   G ++TWG +   FG LG G ++S    K    P+ G+  + ++
Sbjct: 377 VIAIACGVNHSMALRNDGTVWTWGFNA--FGQLGDGTKVS----KNTAVPISGLDGIIAI 430

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 405
           +CG  H+  +   G ++ +GD  +G LG+G  IS +TP +V +L G++++   CG     
Sbjct: 431 TCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGIKSIF--CGY---- 484

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
                   S+S +    G ++ WG+ + G LG G     + PT    L   +   +S G 
Sbjct: 485 --------STSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPT--ETLNIGDIKAISIGS 534

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLT 524
           S  +AL   G V+  G   YGQLGD     K LP +V G    + +  I+ G  H   L 
Sbjct: 535 SHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLPVQVSG---ISGITAISAGGSHSLALK 591

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGV 584
           S   V+ WG+   G+LG G  +DRN P  V  L    V S     SF        WV G 
Sbjct: 592 SDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTVWVWGS 651

Query: 585 D 585
           D
Sbjct: 652 D 652



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 31/343 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V +I+ G  ++  +   G V++WGE   G+LG G  +    P  +  L  I    ++ G 
Sbjct: 227 VSSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLSGIIA--ISSGN 284

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
            H+ A+   G ++ WG +    G LG G   S ++P ++ G L GI   S+SCG +++  
Sbjct: 285 SHSLALKDDGTVWAWGDNES--GQLGDGTTNSKYIPSQVQG-LSGI--VSISCGFYYSMA 339

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           + + G ++ +GD T G LG G     +T   V  L G+  +  ACGV H+ A+       
Sbjct: 340 LKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGV--IAIACGVNHSMAL------- 390

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                 + G ++TWG    G+LG G K ++     ++ L       ++CG S ++AL   
Sbjct: 391 -----RNDGTVWTWGFNAFGQLGDGTKVSKNTAVPISGL--DGIIAITCGTSHSMALKDD 443

Query: 475 GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF--VEEIACGDYHVAVLTSRTEVYTW 532
           G V+  G   YGQLG    NG   +        N   ++ I CG      L     V+ W
Sbjct: 444 GTVWAWGDNQYGQLG----NGTFISNTTPSQVSNLSGIKSIFCGYSTSFALKPDGTVWAW 499

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G    G LG G T    +P+  E L    +K+I  G+S   A+
Sbjct: 500 GNNEYGELGKGFTTRVIYPT--ETLNIGDIKAISIGSSHCLAL 540



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 29/342 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           +  ++ G  H   +   G V++ GE   G+LG+    D++ P  ++ L    V  ++ G+
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLN--KVSSISAGK 234

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
           +++ A+   G ++TWG +  ++G LG G   +   P ++   L GI   ++S G  H+  
Sbjct: 235 YYSMALKSDGTVWTWGEN--DYGQLGDGTTATRLSPVQVQN-LSGII--AISSGNSHSLA 289

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           +   G ++ +GD   G LG G   S   P +V  L G+  V  +CG +++ A+       
Sbjct: 290 LKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGI--VSISCGFYYSMAL------- 340

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                 + G ++ WGD   G+LG G    R     V+ L       ++CG + ++AL   
Sbjct: 341 -----KNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGL--DGVIAIACGVNHSMALRND 393

Query: 475 GHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           G V+T G   +GQLGD  K +      + G    + +  I CG  H   L     V+ WG
Sbjct: 394 GTVWTWGFNAFGQLGDGTKVSKNTAVPISG---LDGIIAITCGTSHSMALKDDGTVWAWG 450

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               G+LG+G       PS V  L    +KSI CG S + A+
Sbjct: 451 DNQYGQLGNGTFISNTTPSQVSNLSG--IKSIFCGYSTSFAL 490



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 153/343 (44%), Gaps = 39/343 (11%)

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
           K+ GP     +  VS G  HT  + S G ++  G+  +G LG+ + I +++P  V+ L  
Sbjct: 172 KIEGP-----IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLNK 226

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
           + ++ A  G +++ A+             S G ++TWG+ D G+LG G    RL P  V 
Sbjct: 227 VSSISA--GKYYSMAL------------KSDGTVWTWGENDYGQLGDGTTATRLSPVQVQ 272

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFV 510
            L       +S G+S ++AL   G V+  G    GQLGD   N K +P++V+G    + +
Sbjct: 273 NL--SGIIAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQG---LSGI 327

Query: 511 EEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
             I+CG Y+   L +   V+ WG   +G+LG G T DRN    V  L    V +I CG +
Sbjct: 328 VSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDG--VIAIACGVN 385

Query: 571 FTAAI----CLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASM 626
            + A+     +  W       +  G ++  N             + C T         SM
Sbjct: 386 HSMALRNDGTVWTWGFNAFGQLGDGTKVSKNTAVPISGLDGIIAITCGTSH-------SM 438

Query: 627 A-PNPNKPYRVCDNCFGKLTKATETSSSSHSTVSRRGSMNQGF 668
           A  +    +   DN +G+L   T  S+++ S VS    +   F
Sbjct: 439 ALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGIKSIF 481



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 44/287 (15%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           +  I+ GG H+  +   G V++WG+   G+LG G   D + P  +  L  I V  ++   
Sbjct: 577 ITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITV--ISNCI 634

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
           + + A+   G ++ WG  + N  L     +M++  P +++G L GI   ++ CG +H   
Sbjct: 635 YRSFALKNDGTVWVWGSDSYNLPL----EKMTM--PIQISG-LSGII--AIECGTYHNLA 685

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV------------------- 395
           + + G ++ +G   FG  G G   + + P +V  L G++ +                   
Sbjct: 686 LKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSGLSGVKAIAVGGNRSIALKSDGTVWQW 745

Query: 396 -RAACGV-------WHTAAVV----EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA 443
            R    V       W TA  V    E++  S++ +  + GK+FTWG  D G+LG G   A
Sbjct: 746 GRILVSVSPSTVETWTTARQVDGLSEIVSISNNVALKNDGKVFTWGANDYGQLGDGTTTA 805

Query: 444 RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
           R+    V+ L       V+   + ++ L   G +   G   +GQLG+
Sbjct: 806 RVTVAPVSGL--EGVAGVASSDTTSMVLMNDGTIRAWGKNNFGQLGN 850



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 146/399 (36%), Gaps = 110/399 (27%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I CG  H+  +   G V++WG+   G+LG+G     + P  +  L  I  + + CG   +
Sbjct: 430 ITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGI--KSIFCGYSTS 487

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+   G ++ WG  N  +G LG G    +  P +    L    + ++S G  H   + +
Sbjct: 488 FALKPDGTVWAWG--NNEYGELGKGFTTRVIYPTE---TLNIGDIKAISIGSSHCLALKN 542

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G ++ +GD  +G LG G     S P +V  + G+  + A               GS S 
Sbjct: 543 DGTVWAWGDNRYGQLGDGTTTIKSLPVQVSGISGITAISAG--------------GSHSL 588

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL----VEPN---------------- 457
           +  S G ++ WG  + G+LG G KE R  P  V+ L    V  N                
Sbjct: 589 ALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTVWV 648

Query: 458 ------------------------FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-- 491
                                      + CG    +AL   G V+  G   +GQ GD   
Sbjct: 649 WGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTT 708

Query: 492 ----------------------------KANGKL-----------PTRVEGKLTKNFVE- 511
                                       K++G +           P+ VE   T   V+ 
Sbjct: 709 TTTNIPVQVSGLSGVKAIAVGGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTARQVDG 768

Query: 512 --EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
             EI     +VA L +  +V+TWG    G+LG G T  R
Sbjct: 769 LSEIVSISNNVA-LKNDGKVFTWGANDYGQLGDGTTTAR 806



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 92/205 (44%), Gaps = 28/205 (13%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I CG  H   +   G V++WG+   G+ G G  +  + P  +  L    V+ +A G + +
Sbjct: 676 IECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSGLSG--VKAIAVGGNRS 733

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL-PKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A+   G ++ WG    +       + +  W   ++++G  E + +S       +   + 
Sbjct: 734 IALKSDGTVWQWGRILVSV----SPSTVETWTTARQVDGLSEIVSIS-------NNVALK 782

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
           + G++FT+G   +G LG G   +  T   V  L+G+  V ++     T ++V +      
Sbjct: 783 NDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEGVAGVASS----DTTSMVLM------ 832

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDK 441
               + G +  WG  + G+LG+G++
Sbjct: 833 ----NDGTIRAWGKNNFGQLGNGER 853


>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Acyrthosiphon pisum]
          Length = 893

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 193/393 (49%), Gaps = 40/393 (10%)

Query: 192 VFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           ++ WG  T +G LG GGI  +   +  ++ +F     ES  V +++++ACG  H   VT+
Sbjct: 20  MYCWGN-TINGELGLGGIEENYILSPEEIVNF-----ES--VNNIKSVACGNNHTLAVTE 71

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            G++++ G    G+LGH  D   +  + I  ++++ +  VACGE H+ A+   G +YTWG
Sbjct: 72  DGQLYACGSNDFGQLGH--DGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWG 129

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
             +C  G LG   +  +    K+   L  + +  +SCG  H   +T+ G+L+T+G   FG
Sbjct: 130 SDSC--GQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFG 187

Query: 371 VLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG G    +VS P  V+SL GL     ACG +H+  V              SG +F WG
Sbjct: 188 QLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVV------------SKSGAVFGWG 235

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
             D G+LG   + +   P  +  +       ++ G   +V LT  G V+T G+ +YGQLG
Sbjct: 236 KNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLG 295

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT-SRTEVYTWGKGANGRLGHGDTDDR 548
               + ++  R   +L  + V ++ CG  H   L  S+  VY++G G+ G+LG   + + 
Sbjct: 296 HGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINS 355

Query: 549 NFP-------------SLVEALKDKQVKSIVCG 568
           N P             S++E  K   VKSI  G
Sbjct: 356 NTPQLVLGPWLSPSGTSMIETNKQYVVKSIYAG 388



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 162/329 (49%), Gaps = 26/329 (7%)

Query: 254 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWG 310
           ++ WG  + G LG G   ++ +  P+ I   +++N ++ VACG +HT AVT  G +Y  G
Sbjct: 20  MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 79

Query: 311 GSNCNFGLLGH-GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            ++  FG LGH G    L   +K+ G +E + ++SV+CG  H+  +   GQL+T+G  + 
Sbjct: 80  SND--FGQLGHDGCRTKL---QKIPG-VESLVMTSVACGEAHSMALNEWGQLYTWGSDSC 133

Query: 370 GVLG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG   D      P+ V +L  +  V+ +CG  H  A+             + G+L+TW
Sbjct: 134 GQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALT------------NHGELYTW 181

Query: 429 GDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           G  + G+LG G     +  PT V +LV      ++CG   +  ++ +G V+  G   +GQ
Sbjct: 182 GSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQ 241

Query: 488 LG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG + + +   P +++   T   V+ IA G+     LT    V+T G G  G+LGHG   
Sbjct: 242 LGINSQTSLSSPAQLKTIRTVK-VKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFS 300

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +   P  V  L    V  + CG   T  +
Sbjct: 301 NEIVPRKVLELMGSTVTQVTCGRRHTLTL 329


>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 171/338 (50%), Gaps = 25/338 (7%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +I+CG  H  LVT  G+++ +G    G+LG    S +S P  + ALK+  V   +CG +H
Sbjct: 41  HISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNH 100

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G +Y+ GG++   G LG G+       ++++       +  +S G   +A +T
Sbjct: 101 TLLYTEQGKLYSSGGNSE--GQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALT 158

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G LG       STP+++D  K +  +  +CG +H+A V +       
Sbjct: 159 VDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWI--SCGYYHSAFVTQ------- 209

Query: 417 SSNCSSGKLFTWGDGDRGRLG-HGDK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                 G+L+T+G+ + G+LG   DK +    P  V+ L       VSCG   T+A+T  
Sbjct: 210 -----DGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGL-SGKVKIVSCGGEHTIAVTEK 263

Query: 475 GHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             VYT G   +GQLG        +LP  V+  LTK  +  + CG+ H AV+T +  +YT+
Sbjct: 264 -EVYTFGLGQFGQLGHGTFIFETQLPKAVD-VLTKKTILYVTCGENHTAVITDKGLLYTF 321

Query: 533 GKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           G G +G+LG G+ +  N   P L        V+S+ CG
Sbjct: 322 GDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACG 359



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 143/298 (47%), Gaps = 23/298 (7%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           LKN     ++CG+ HT  VT +G +Y +G +  N+G LG     ++  P  +   L+   
Sbjct: 34  LKNDKPAHISCGDEHTVLVTGNGKLYVFGSN--NWGQLGLEAGSAISKPTCVKA-LKSEK 90

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V   SCG  HT + T  G+L++ G  + G LG GD    ++ +E+        ++     
Sbjct: 91  VVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAG 150

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            +T+A + V            GKLF WGD   G+LG  +KEA         + +P    +
Sbjct: 151 SNTSAALTV-----------DGKLFMWGDNSEGQLGL-EKEAIYSTPQKIDIGKP-ISWI 197

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDY 518
           SCG+  +  +T  G +YT G P  G+LG P       K P RV G   K  V+ ++CG  
Sbjct: 198 SCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGK--VKIVSCGGE 255

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H   +T + EVYT+G G  G+LGHG    +   P  V+ L  K +  + CG + TA I
Sbjct: 256 HTIAVTEK-EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVI 312



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 144/296 (48%), Gaps = 31/296 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK-NINVELVACGEHHT 297
           +CG  H  L T+QG+++S G    G+LG G  S  +  + I        ++ ++ G + +
Sbjct: 95  SCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTS 154

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+T+ G ++ WG ++   G LG   E     P+K++    G  +S +SCG +H+A VT 
Sbjct: 155 AALTVDGKLFMWGDNSE--GQLGLEKEAIYSTPQKIDI---GKPISWISCGYYHSAFVTQ 209

Query: 358 AGQLFTFGDGTFGVLG-HGDRISV-STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            G+L+TFG+   G LG   D++     P+ V  L G   +  +CG  HT AV E  V   
Sbjct: 210 DGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKI-VSCGGEHTIAVTEKEV--- 265

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGD--KEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                     +T+G G  G+LGHG    E +L P  V  L +     V+CG + T  +T 
Sbjct: 266 ----------YTFGLGQFGQLGHGTFIFETQL-PKAVDVLTKKTILYVTCGENHTAVITD 314

Query: 474 TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVLTS 525
            G +YT G   +G+LG  + N     +    L  NF    V+ +ACG  H+ V  +
Sbjct: 315 KGLLYTFGDGRHGKLGLGEEN--FTNQFVPILCSNFLKFTVQSVACGGCHMLVFAT 368



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 122/242 (50%), Gaps = 24/242 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ ++ G   +A +T  G++F WG+   G+LG   ++  S P+ ID  K I+   ++CG 
Sbjct: 144 IKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPIS--WISCGY 201

Query: 295 HHTCAVTLSGDMYTWGG-SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           +H+  VT  G++YT+G   N   GL     +     P++++G L G  V  VSCG  HT 
Sbjct: 202 YHSAFVTQDGELYTFGEPENGKLGLPSDKLKKH-KKPQRVSG-LSG-KVKIVSCGGEHTI 258

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            VT   +++TFG G FG LGHG  I     P+ VD L     +   CG  HTA + +   
Sbjct: 259 AVTEK-EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD--- 314

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKE--ARLVPTCVAALVEPNFCQVSCG--HSLT 468
                     G L+T+GDG  G+LG G++    + VP   +  ++     V+CG  H L 
Sbjct: 315 ---------KGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLV 365

Query: 469 VA 470
            A
Sbjct: 366 FA 367



 Score = 43.5 bits (101), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--P 276
            ++ +PKAV+      +  + CG  H A++T +G ++++G+   G+LG G ++  +   P
Sbjct: 283 FETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVP 342

Query: 277 KLIDALKNINVELVACGEHH 296
            L        V+ VACG  H
Sbjct: 343 ILCSNFLKFTVQSVACGGCH 362


>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
 gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 171/338 (50%), Gaps = 25/338 (7%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +I+CG  H  LVT  G+++ +G    G+LG    S +S P  + ALK+  V   +CG +H
Sbjct: 41  HISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNH 100

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G +Y+ GG++   G LG G+       ++++       +  +S G   +A +T
Sbjct: 101 TLLYTEQGKLYSSGGNSE--GQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALT 158

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G LG       STP+++D  K +  +  +CG +H+A V +       
Sbjct: 159 VDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWI--SCGYYHSAFVTQ------- 209

Query: 417 SSNCSSGKLFTWGDGDRGRLG-HGDK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                 G+L+T+G+ + G+LG   DK +    P  V+ L       VSCG   T+A+T  
Sbjct: 210 -----DGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGL-SGKVKIVSCGGEHTIAVTEK 263

Query: 475 GHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             VYT G   +GQLG        +LP  V+  LTK  +  + CG+ H AV+T +  +YT+
Sbjct: 264 -EVYTFGLGQFGQLGHGTFIFETQLPKAVD-VLTKKTILYVTCGENHTAVITDKGLLYTF 321

Query: 533 GKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           G G +G+LG G+ +  N   P L        V+S+ CG
Sbjct: 322 GDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACG 359



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 143/298 (47%), Gaps = 23/298 (7%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           LKN     ++CG+ HT  VT +G +Y +G +  N+G LG     ++  P  +   L+   
Sbjct: 34  LKNDRPAHISCGDEHTVLVTGNGKLYVFGSN--NWGQLGLEAGSAISKPTCVKA-LKSEK 90

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V   SCG  HT + T  G+L++ G  + G LG GD    ++ +E+        ++     
Sbjct: 91  VVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAG 150

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            +T+A + V            GKLF WGD   G+LG  +KEA         + +P    +
Sbjct: 151 SNTSAALTV-----------DGKLFMWGDNSEGQLGL-EKEAIYSTPQKIDIGKP-ISWI 197

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDY 518
           SCG+  +  +T  G +YT G P  G+LG P       K P RV G   K  V+ ++CG  
Sbjct: 198 SCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGK--VKIVSCGGE 255

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H   +T + EVYT+G G  G+LGHG    +   P  V+ L  K +  + CG + TA I
Sbjct: 256 HTIAVTEK-EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVI 312



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 144/296 (48%), Gaps = 31/296 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK-NINVELVACGEHHT 297
           +CG  H  L T+QG+++S G    G+LG G  S  +  + I        ++ ++ G + +
Sbjct: 95  SCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTS 154

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+T+ G ++ WG ++   G LG   E     P+K++    G  +S +SCG +H+A VT 
Sbjct: 155 AALTVDGKLFMWGDNSE--GQLGLEKEAIYSTPQKIDI---GKPISWISCGYYHSAFVTQ 209

Query: 358 AGQLFTFGDGTFGVLG-HGDRISV-STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            G+L+TFG+   G LG   D++     P+ V  L G   +  +CG  HT AV E  V   
Sbjct: 210 DGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKI-VSCGGEHTIAVTEKEV--- 265

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGD--KEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                     +T+G G  G+LGHG    E +L P  V  L +     V+CG + T  +T 
Sbjct: 266 ----------YTFGLGQFGQLGHGTFIFETQL-PKAVDVLTKKTILYVTCGENHTAVITD 314

Query: 474 TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVLTS 525
            G +YT G   +G+LG  + N     +    L  NF    V+ +ACG  H+ V  +
Sbjct: 315 KGLLYTFGDGRHGKLGLGEEN--FTNQFVPILCSNFLKFTVQSVACGGCHMLVFAT 368



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 122/242 (50%), Gaps = 24/242 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ ++ G   +A +T  G++F WG+   G+LG   ++  S P+ ID  K I+   ++CG 
Sbjct: 144 IKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPIS--WISCGY 201

Query: 295 HHTCAVTLSGDMYTWGG-SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           +H+  VT  G++YT+G   N   GL     +     P++++G L G  V  VSCG  HT 
Sbjct: 202 YHSAFVTQDGELYTFGEPENGKLGLPSDKLKKH-KKPQRVSG-LSG-KVKIVSCGGEHTI 258

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
            VT   +++TFG G FG LGHG  I     P+ VD L     +   CG  HTA + +   
Sbjct: 259 AVTEK-EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD--- 314

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKE--ARLVPTCVAALVEPNFCQVSCG--HSLT 468
                     G L+T+GDG  G+LG G++    + VP   +  ++     V+CG  H L 
Sbjct: 315 ---------KGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLV 365

Query: 469 VA 470
            A
Sbjct: 366 FA 367



 Score = 43.5 bits (101), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--P 276
            ++ +PKAV+      +  + CG  H A++T +G ++++G+   G+LG G ++  +   P
Sbjct: 283 FETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVP 342

Query: 277 KLIDALKNINVELVACGEHH 296
            L        V+ VACG  H
Sbjct: 343 ILCSNFLKFTVQSVACGGCH 362


>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
          Length = 1698

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 171/344 (49%), Gaps = 34/344 (9%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +I+CG  H+A VT+QG +F +G+   G+LG  +   V+ P  +  LK    + VACG  H
Sbjct: 38  HISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDH 97

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G++   GG++     LGH N+   +  ++L    +   +  +S G   +A +T
Sbjct: 98  TLVSTSQGEILAAGGNSDGQLGLGHCNDSISF--QRLRPFCDYAPIKLLSAGDHTSAALT 155

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G LG G+      P+E++  + +  V  +CG  H+A V +       
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWV--SCGYRHSALVTD------- 206

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                SG ++++G+   GRLG    +      P  V +L   +  QV+CG   T+AL T 
Sbjct: 207 -----SGDVYSFGESADGRLGLSAHQLANHSYPQRVESL--HSVLQVACGGKHTLAL-TE 258

Query: 475 GHVYTMGSPVYGQLGDPKANGKL------PTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
             +Y  G   +GQLG     G L      P  V G   K  V  + CG+ H A++T    
Sbjct: 259 DELYCFGGGEFGQLG----LGTLVFVADSPVAV-GHFRKGRVTHVTCGEQHSALITDSGL 313

Query: 529 VYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCGTS 570
           +YT+G G +G+LGHGD +  N   P++ +   +  V ++ CG+S
Sbjct: 314 LYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSS 357



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 148/300 (49%), Gaps = 36/300 (12%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACG 293
            Q++ACG  H  + T QGE+ + G    G+LG G  +D +S  +L        ++L++ G
Sbjct: 88  AQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAG 147

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           +H + A+T  G ++ WG ++   G LG GN+    LPK+LN    G  +  VSCG  H+A
Sbjct: 148 DHTSAALTEDGRLFLWGDNSA--GQLGFGNDSHALLPKELNM---GQSIHWVSCGYRHSA 202

Query: 354 VVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +VT +G +++FG   DG  G+  H    + S P+ V+SL  +  ++ ACG  HT A+ E 
Sbjct: 203 LVTDSGDVYSFGESADGRLGLSAH-QLANHSYPQRVESLHSV--LQVACGGKHTLALTE- 258

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-----PTCVAALVEPNFCQVSCGH 465
                        +L+ +G G+ G+LG G     LV     P  V    +     V+CG 
Sbjct: 259 ------------DELYCFGGGEFGQLGLG----TLVFVADSPVAVGHFRKGRVTHVTCGE 302

Query: 466 SLTVALTTTGHVYTMGSPVYGQL--GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
             +  +T +G +YT G   +G+L  GD     +    V  +  +  V  +ACG  H+ V 
Sbjct: 303 QHSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLVF 362



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 23/219 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F+WG+ +  G LG G   + S+A       +PK  E  +   +  ++CG RH+ALVT
Sbjct: 158 GRLFLWGDNSA-GQLGFG---NDSHA------LLPK--ELNMGQSIHWVSCGYRHSALVT 205

Query: 250 KQGEVFSWGEELGGRLG---HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
             G+V+S+GE   GRLG   H + ++ S+P+ +++L   +V  VACG  HT A+T   ++
Sbjct: 206 DSGDVYSFGESADGRLGLSAHQL-ANHSYPQRVESLH--SVLQVACGGKHTLALT-EDEL 261

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           Y +GG    FG LG G  + +       G      V+ V+CG  H+A++T +G L+TFGD
Sbjct: 262 YCFGGG--EFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGD 319

Query: 367 GTFGVLGHGDR--ISVSTPREVDSLKGLRTVRAACGVWH 403
           G  G LGHGD    +  TP           +  ACG  H
Sbjct: 320 GRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 10/99 (10%)

Query: 474 TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           TG V+T         G  K    +P+R+   L  +    I+CG  H A +T +  ++ +G
Sbjct: 10  TGAVFT--------FGKSKIANNVPSRL--WLKSDIPVHISCGQSHSAFVTEQGRLFVFG 59

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
               G+LG         P  V+ LK ++ +S+ CGT  T
Sbjct: 60  DNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98


>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Acyrthosiphon pisum]
          Length = 1053

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 193/393 (49%), Gaps = 40/393 (10%)

Query: 192 VFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           ++ WG  T +G LG GGI  +   +  ++ +F     ES  V +++++ACG  H   VT+
Sbjct: 1   MYCWGN-TINGELGLGGIEENYILSPEEIVNF-----ES--VNNIKSVACGNNHTLAVTE 52

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            G++++ G    G+LGH  D   +  + I  ++++ +  VACGE H+ A+   G +YTWG
Sbjct: 53  DGQLYACGSNDFGQLGH--DGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWG 110

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
             +C  G LG   +  +    K+   L  + +  +SCG  H   +T+ G+L+T+G   FG
Sbjct: 111 SDSC--GQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFG 168

Query: 371 VLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG G    +VS P  V+SL GL     ACG +H+  V              SG +F WG
Sbjct: 169 QLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVV------------SKSGAVFGWG 216

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
             D G+LG   + +   P  +  +       ++ G   +V LT  G V+T G+ +YGQLG
Sbjct: 217 KNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLG 276

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT-SRTEVYTWGKGANGRLGHGDTDDR 548
               + ++  R   +L  + V ++ CG  H   L  S+  VY++G G+ G+LG   + + 
Sbjct: 277 HGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINS 336

Query: 549 NFP-------------SLVEALKDKQVKSIVCG 568
           N P             S++E  K   VKSI  G
Sbjct: 337 NTPQLVLGPWLSPSGTSMIETNKQYVVKSIYAG 369



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 162/329 (49%), Gaps = 26/329 (7%)

Query: 254 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWG 310
           ++ WG  + G LG G   ++ +  P+ I   +++N ++ VACG +HT AVT  G +Y  G
Sbjct: 1   MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 60

Query: 311 GSNCNFGLLGH-GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            ++  FG LGH G    L   +K+ G +E + ++SV+CG  H+  +   GQL+T+G  + 
Sbjct: 61  SND--FGQLGHDGCRTKL---QKIPG-VESLVMTSVACGEAHSMALNEWGQLYTWGSDSC 114

Query: 370 GVLG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LG   D      P+ V +L  +  V+ +CG  H  A+             + G+L+TW
Sbjct: 115 GQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALT------------NHGELYTW 162

Query: 429 GDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           G  + G+LG G     +  PT V +LV      ++CG   +  ++ +G V+  G   +GQ
Sbjct: 163 GSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQ 222

Query: 488 LG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG + + +   P +++   T   V+ IA G+     LT    V+T G G  G+LGHG   
Sbjct: 223 LGINSQTSLSSPAQLKTIRTVK-VKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFS 281

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +   P  V  L    V  + CG   T  +
Sbjct: 282 NEIVPRKVLELMGSTVTQVTCGRRHTLTL 310


>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
          Length = 560

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 180/383 (46%), Gaps = 62/383 (16%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK--LIDA 281
           PKAV+      VQ I+ G  H+ +VT+ G++F  G  L G+LG    +  S+PK  L+ A
Sbjct: 39  PKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICGSALHGKLGFEDANQPSYPKFLLVQA 98

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP----- 336
           +K + V  VA G++HT  +  +G +Y WGG+                L KKL        
Sbjct: 99  MKGLFVTQVATGDYHTLCLLDNGQVYAWGGT----------------LHKKLGSKAGKPA 142

Query: 337 -LEGIH--VSSVSCGPWHTAVVTSAGQLFTFG----DGTFGVLGHGDRISVSTPREVDSL 389
            +E +   +  + CG +H+A +++ G L+T+G    D   G LGHG    V TP+ V   
Sbjct: 143 RIETLKQTIVQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLGHGHLNDVETPQIVKD- 201

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
                V+ +CG +H  A+ +             G+L++WG G  G  G G+ +  L+P  
Sbjct: 202 ---NIVKFSCGGYHMMALDK------------DGELWSWGSGMYGETGQGEFQDSLLPKK 246

Query: 450 VAA-------LVEPNFCQ---------VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA 493
           V         +++  F Q         +S G   ++ L+  G VY  G   +GQLG    
Sbjct: 247 VKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLGIKAT 306

Query: 494 NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL 553
             +   ++   ++   + +IA G  H  VLTS ++VYT G    G+LG GD + R   + 
Sbjct: 307 ENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTR 366

Query: 554 VEALKDKQVKSIVCGTSFTAAIC 576
           +  L+ +++K +  G + + A+ 
Sbjct: 367 INFLEQRRIKQLFAGGNHSWALI 389



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 160/346 (46%), Gaps = 44/346 (12%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           +F+WG    G L  G     + PK +  LKN  V+L++ G +H+  VT  G ++  G  +
Sbjct: 17  LFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICG--S 74

Query: 314 CNFGLLGHGNEMSLWLPK-KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
              G LG  +      PK  L   ++G+ V+ V+ G +HT  +   GQ++ +G      L
Sbjct: 75  ALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKL 134

Query: 373 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG--- 429
           G         P  +++LK    V+  CG +H+AA+             ++G L+TWG   
Sbjct: 135 GS----KAGKPARIETLKQ-TIVQIGCGDFHSAAL------------SANGDLYTWGGGG 177

Query: 430 -DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            D +RG+LGHG       P     +V+ N  + SCG    +AL   G +++ GS +YG+ 
Sbjct: 178 RDYNRGQLGHGHLNDVETPQ----IVKDNIVKFSCGGYHMMALDKDGELWSWGSGMYGET 233

Query: 489 GDPK-ANGKLPTRVEGKLTKNF---------------VEEIACGDYHVAVLTSRTEVYTW 532
           G  +  +  LP +V+    +                 ++EI+ G +H  +L+++  VY  
Sbjct: 234 GQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGIVYAC 293

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
           G   +G+LG   T+++N   LV  +  K +  I  G + +  +  H
Sbjct: 294 GYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSH 339


>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
          Length = 432

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 166/371 (44%), Gaps = 68/371 (18%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H+  +     V SWG    G+LGHG   D S P  + AL    +  V CG  HT
Sbjct: 16  ISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHT 75

Query: 298 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + S  ++Y+WG  +  FG LGHGN   L+ P  +   L G+ +  ++CG  H   VT
Sbjct: 76  VAYSQSRLEVYSWGWGD--FGRLGHGNSSDLFTPLPIKA-LHGVMIKQIACGDSHCLAVT 132

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG G+      P+++ + +G+R    A G  HTAAV E       
Sbjct: 133 MDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 185

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT----CV----AALVEPN----------- 457
                 G L+ W DG   + G  D+  RL       CV     A+++P+           
Sbjct: 186 -----DGDLYGW-DGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIYL 239

Query: 458 ------------------------------FCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
                                         F Q+S G   T+ LT+ G +Y  G   +GQ
Sbjct: 240 WMEQIWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQ 299

Query: 488 LGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           +G      +  P +V     +  V +++CG  H   +T R  V+ WG+G NG+LG G++ 
Sbjct: 300 VGVGNNLDQCSPVQVRFPDDQKVV-QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESL 358

Query: 547 DRNFPSLVEAL 557
           DRN P+++EAL
Sbjct: 359 DRNSPNIIEAL 369



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 156/384 (40%), Gaps = 83/384 (21%)

Query: 129 PPKVLLPSESACGSVNSLSSG-------GSDGRTGHLKGLSGDTFRVSLSSA-----VSS 176
           P KVL+ S  A  SV  LS         G DG+ GH  G + D    +  SA     + S
Sbjct: 10  PRKVLIISAGASHSVALLSGEVVCSWGRGEDGQLGH--GDAEDRSSPTQLSALDEHQIVS 67

Query: 177 SSQGSGHDDGDSLG--DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
            + G+ H    S    +V+ WG         G   R G   G   D F P  +++   + 
Sbjct: 68  VTCGADHTVAYSQSRLEVYSWGW--------GDFGRLGH--GNSSDLFTPLPIKALHGVM 117

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ IACG  H   VT  GEV SWG    G+LG G   D   P+ I A + I +++VA G 
Sbjct: 118 IKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGA 177

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM----SLWLPKKLNGPLEGIHV-------- 342
            HT AVT  GD+Y W G    FG+    + +     L   + ++G +   H+        
Sbjct: 178 EHTAAVTEDGDLYGWDGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSII 237

Query: 343 ---------------------------------SSVSCGPWHTAVVTSAGQLFTFGDGTF 369
                                            S +S G  HT  +TS G+L+ +G   F
Sbjct: 238 YLWMEQIWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKF 297

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G +G G+ +   +P +V      + V+ +CG  HT AV E               +F WG
Sbjct: 298 GQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE------------RNNVFAWG 345

Query: 430 DGDRGRLGHGDKEARLVPTCVAAL 453
            G  G+LG G+   R  P  + AL
Sbjct: 346 RGTNGQLGIGESLDRNSPNIIEAL 369



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 2/171 (1%)

Query: 407 VVEVMVGSSSSSNCSSGKLF-TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
           V+ +  G+S S    SG++  +WG G+ G+LGHGD E R  PT ++AL E     V+CG 
Sbjct: 13  VLIISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGA 72

Query: 466 SLTVALTTTG-HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
             TVA + +   VY+ G   +G+LG   ++          L    +++IACGD H   +T
Sbjct: 73  DHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVT 132

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              EV +WG+  NG+LG G+T+D   P  ++A +  ++K +  G   TAA+
Sbjct: 133 MDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV 183



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 141/340 (41%), Gaps = 68/340 (20%)

Query: 287 VELVACGEHHTCAVTLSGDMY-TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
           V +++ G  H+ A+ LSG++  +WG      G LGHG+      P +L+  L+   + SV
Sbjct: 13  VLIISAGASHSVAL-LSGEVVCSWG--RGEDGQLGHGDAEDRSSPTQLSA-LDEHQIVSV 68

Query: 346 SCGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
           +CG  HT A   S  +++++G G FG LGHG+   + TP  + +L G+   + ACG  H 
Sbjct: 69  TCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHC 128

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
            AV               G++ +WG    G+LG G+ E  LVP  + A        V+ G
Sbjct: 129 LAVT------------MDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAG 176

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL--------------------------- 497
              T A+T  G +Y     ++ + G    N +L                           
Sbjct: 177 AEHTAAVTEDGDLYGWDGKIW-KFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWS 235

Query: 498 ----------PTRV------------EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
                     PTR               +    F  +I+ G  H   LTS  ++Y WG  
Sbjct: 236 IIYLWMEQIWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWN 295

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G++G G+  D+  P  V    D++V  + CG   T A+
Sbjct: 296 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 335



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 3/119 (2%)

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACG-DY 518
           +S G S +VAL +   V + G    GQLG   A  +  PT++   L ++ +  + CG D+
Sbjct: 16  ISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSA-LDEHQIVSVTCGADH 74

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            VA   SR EVY+WG G  GRLGHG++ D   P  ++AL    +K I CG S   A+ +
Sbjct: 75  TVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVTM 133


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 189/398 (47%), Gaps = 40/398 (10%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVK--MDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           V+ WG    +G LG   H     +G++   +   PK +E+     + ++  G  H+A + 
Sbjct: 44  VYTWG----NGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSAAID 99

Query: 250 KQGEVFSWGEELGGRLGHGVDSDV-SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           + G+++ WG     +LG G  S++ + P+ ++ALK + +  V+CG++ T AV   G MY+
Sbjct: 100 EDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYS 159

Query: 309 WG--GSNCNFGLLGHGNEMSLWLPKKLNGPL--EGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           WG  GS                   +L   L  +G+ + +V CG +HT  ++  G+++ +
Sbjct: 160 WGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAW 219

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G+G +G LG+G+  +   P  ++       V  A G   + A+ +            +G+
Sbjct: 220 GNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTD------------NGE 267

Query: 425 LFTWGDGDRGRLGHGDKEA------RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
           L++WG   + +LG G   A        +P  V A    +  Q++ G+    A+T  G +Y
Sbjct: 268 LYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLY 327

Query: 479 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
             GS ++ +   P    ++    E K+      ++ACG  +   L+   EV+T+GKG++ 
Sbjct: 328 MWGSKIWIE---PH---EMTAVNEYKMV-----QVACGRQYTVALSENGEVFTFGKGSSN 376

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
            LGHGD  ++  P  +EAL D  + SI CG     AI 
Sbjct: 377 CLGHGDRKNQLQPVQIEALADVNITSISCGDYHMGAIA 414



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 122/242 (50%), Gaps = 26/242 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           +  + CG  H   ++K GE+++WG    GRLG+G       P+ I+     NV  +A G 
Sbjct: 197 ILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGR 256

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE---GIHVSSVSCGPWH 351
             + A+T +G++Y+WGG++ N   +G G  M ++  + +   +E   G+ V  ++ G  H
Sbjct: 257 DFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDH 316

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            A VT  G+L+ +          G +I +  P E+ ++   + V+ ACG  +T A+ E  
Sbjct: 317 AAAVTDDGRLYMW----------GSKIWIE-PHEMTAVNEYKMVQVACGRQYTVALSE-- 363

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                     +G++FT+G G    LGHGD++ +L P  + AL + N   +SCG     A+
Sbjct: 364 ----------NGEVFTFGKGSSNCLGHGDRKNQLQPVQIEALADVNITSISCGDYHMGAI 413

Query: 472 TT 473
            T
Sbjct: 414 AT 415



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 104/243 (42%), Gaps = 38/243 (15%)

Query: 361 LFTFGDGTFGVLGHGDRISVS--------TPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           ++T+G+GT G LGHG  +           TP+ +++ +G        G  H+AA+ E   
Sbjct: 44  VYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSAAIDE--- 100

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                     GKL+ WG  +  +LG G+  E   +P  V AL       VSCG   T A+
Sbjct: 101 ---------DGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAV 151

Query: 472 TTTGHVYTMG----------SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
              G +Y+ G             +    D      L T V+  +    VE   CG++H  
Sbjct: 152 DADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVE---CGEFHTV 208

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----L 577
            L+   E++ WG G  GRLG+G++D    P  +E      V SI  G  F+ A+     L
Sbjct: 209 ALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGEL 268

Query: 578 HKW 580
           + W
Sbjct: 269 YSW 271



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 26/196 (13%)

Query: 425 LFTWGDGDRGRLGHG--------DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
           ++TWG+G  G+LGHG        +    L P  + A        V  G S + A+   G 
Sbjct: 44  VYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSAAIDEDGK 103

Query: 477 VYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           +Y  GS  Y +  LG+      LP  VE  L    + +++CGDY  A + +  ++Y+WG 
Sbjct: 104 LYVWGSNEYSKLGLGESSEMETLPREVEA-LKGVKIVDVSCGDYFTAAVDADGKMYSWGW 162

Query: 535 GAN-----GRLGHGDTDDRNFPSLVEALKDKQVK--SIVCGTSFTAAIC----LHKWVSG 583
           G +     G LGH    D   P L+  L D+ V   ++ CG   T A+     +  W +G
Sbjct: 163 GGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGNG 222

Query: 584 VDQSMCSG----CRIP 595
               + +G    C +P
Sbjct: 223 EYGRLGNGESDTCEVP 238



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 15/132 (11%)

Query: 459 CQVSCGHSLTV------ALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG---KLTKN 508
           C+ S   SL        A +T   VYT G+   GQLG  P     +    E    KL + 
Sbjct: 20  CRASVARSLATRSALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEA 79

Query: 509 F----VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNFPSLVEALKDKQVK 563
           F    +  +  G  H A +    ++Y WG     +LG G++ +    P  VEALK  ++ 
Sbjct: 80  FEGKAITHVEFGASHSAAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIV 139

Query: 564 SIVCGTSFTAAI 575
            + CG  FTAA+
Sbjct: 140 DVSCGDYFTAAV 151


>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 164/347 (47%), Gaps = 31/347 (8%)

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           G+LG G   +   A  ++D F P A        V +++    HAA V + GEVF+ G+  
Sbjct: 140 GVLGQGSETTQCVAFTRID-FPPLA-------RVVHVSASFNHAAFVMQSGEVFTCGDNS 191

Query: 262 GGRLGH-GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 320
               GH      +  P+L+++LK I  + VA G + T  +T  G +YT G +    G LG
Sbjct: 192 SSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNT--HGQLG 249

Query: 321 HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV 380
           HG+      PK +        V  ++ GP +   VT  G +++FG G    LGHG++   
Sbjct: 250 HGDTQDRPTPKMIEVLSS---VVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDE 306

Query: 381 STPREVDSL--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH 438
             PR +     KG+  VR + G  H  A+             S+G ++TWG G  G LGH
Sbjct: 307 LQPRAIQKFRRKGIHIVRVSAGDEHAVALD------------SNGYVYTWGKGYCGALGH 354

Query: 439 GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGK 496
           GD+  +  P  + +L      QV      T  L  +G VY  GS  +G LG  D + +GK
Sbjct: 355 GDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGK 414

Query: 497 -LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            L  R+   L  + V +I+ G YH  V+TSR +++ +G     +LGH
Sbjct: 415 VLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGH 461



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 136/280 (48%), Gaps = 22/280 (7%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP-KKLNGPLEGIHVSSVSCG 348
           +  G++HT  ++ S  +Y+ G   C  G+LG G+E +  +   +++ P     V  VS  
Sbjct: 116 ITTGKYHTLLISNS-SVYSCGSGLC--GVLGQGSETTQCVAFTRIDFPPLA-RVVHVSAS 171

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAV 407
             H A V  +G++FT GD +    GH D    +  PR V+SLKG+   + A G+  T  +
Sbjct: 172 FNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFL 231

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
                          G ++T G    G+LGHGD + R  P  +  L   +  Q++ G S 
Sbjct: 232 TR------------KGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL--SSVVQIAAGPSY 277

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN--FVEEIACGDYHVAVLTS 525
            +++T  G VY+ GS     LG  + + +L  R   K  +    +  ++ GD H   L S
Sbjct: 278 ILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDS 337

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
              VYTWGKG  G LGHGD  ++  P L+ +LK++ V  +
Sbjct: 338 NGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQV 377



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 113/238 (47%), Gaps = 22/238 (9%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   D   PK +E  V+  V  IA G  +   VT+ G V+S+G      LGHG   D   
Sbjct: 251 GDTQDRPTPKMIE--VLSSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQ 308

Query: 276 PKLIDAL--KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
           P+ I     K I++  V+ G+ H  A+  +G +YTWG   C  G LGHG+E+    P+ L
Sbjct: 309 PRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYC--GALGHGDEIEKTTPELL 366

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI---SVSTPREVDSLK 390
              L+   V  V      T V+  +G ++ FG   FG LG  DR     V  PR +D+L+
Sbjct: 367 T-SLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGKVLKPRILDTLR 425

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
                + + G++HT  +             S G++F +GD +R +LGH    + L PT
Sbjct: 426 THHVSQISTGLYHTVVIT------------SRGQIFGFGDNERAQLGHDILRSCLEPT 471



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 142/343 (41%), Gaps = 28/343 (8%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKLIDALKNINVELVACGEHHTCA 299
           G++  L+     V+S G  L G LG G ++   V+  + ID      V  V+   +H   
Sbjct: 119 GKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTR-IDFPPLARVVHVSASFNHAAF 177

Query: 300 VTLSGDMYTWG--GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           V  SG+++T G   S+C     GH +        +L   L+GI    V+ G   T  +T 
Sbjct: 178 VMQSGEVFTCGDNSSSC----CGHRDTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFLTR 233

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G ++T G  T G LGHGD     TP+ ++ L  +  V+ A G  +  +V E        
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSV--VQIAAGPSYILSVTE-------- 283

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP--NFCQVSCGHSLTVALTTTG 475
               +G ++++G G    LGHG++   L P  +        +  +VS G    VAL + G
Sbjct: 284 ----NGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNG 339

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +VYT G    G LG      K    +   L    V ++        VL     VY +G  
Sbjct: 340 YVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSM 399

Query: 536 ANGRLGHGD---TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G LG  D   +     P +++ L+   V  I  G   T  I
Sbjct: 400 GFGSLGFLDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVI 442



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 8/176 (4%)

Query: 216 GVKMDSFVPKAVESAVV--LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
           G + D   P+A++      + +  ++ G  HA  +   G V++WG+   G LGHG + + 
Sbjct: 301 GEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEK 360

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM---SLWLP 330
           + P+L+ +LKN  V  V   +  T  +  SG +Y +G  +  FG LG  +      +  P
Sbjct: 361 TTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFG--SMGFGSLGFLDRRVSGKVLKP 418

Query: 331 KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
           + L+  L   HVS +S G +HT V+TS GQ+F FGD     LGH    S   P E+
Sbjct: 419 RILD-TLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDILRSCLEPTEI 473


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 168/362 (46%), Gaps = 26/362 (7%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G+      P AV S +   V  IA G  H   +T  G V+ WG    G+LG G  +  S 
Sbjct: 292 GLTFGRSTPGAV-SGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARST 350

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P  +  L +  VE +A G++HTCA+  SG +  WG  + + G LG G   +   P  ++G
Sbjct: 351 PVAVSGLPS-GVETIAAGDYHTCALMSSGGVRCWG--HNDRGQLGDGTTTARSTPVAVSG 407

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL-KGLRT 394
              G  V++++ G  HT   TS+G ++ +GD + G LG G     STP  V  L  G+ T
Sbjct: 408 LPSG--VTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASGVET 465

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
           + A  G WHT A+              SG ++ WG  + G+LG G     + P  V+ L 
Sbjct: 466 IAA--GGWHTCALT------------GSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGL- 510

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEI 513
                 ++ G   T ALT +G V+  G    GQLGD     +  P  V G    + V  I
Sbjct: 511 PSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGL--PSGVTAI 568

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           A GD H   LT    V+ WG    G+LG G T +R+ P  V  L    V +I  G  +T 
Sbjct: 569 AAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLP-SGVTAIAAGLRYTC 627

Query: 574 AI 575
           A+
Sbjct: 628 AL 629



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 127/362 (35%), Positives = 164/362 (45%), Gaps = 28/362 (7%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   DS  P AV S +   V  IA GG H   +T  GEV+ WG    G+LG G  +  S 
Sbjct: 88  GSYTDSSTPVAV-SGLPSGVTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRST 146

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLN 334
           P  +  L +  V  +A G  HTCA T SG ++ WGG   N+ G LG G       P  ++
Sbjct: 147 PVAVSGLPS-GVTAIAAGGWHTCARTSSGGVWCWGG---NYRGQLGDGTTTDRSTPVAVS 202

Query: 335 G-PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 393
           G P E   V++++ G  HT    S+G+++ +G   +G LG G     STP  V  L    
Sbjct: 203 GLPSE---VTAIAAGDAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPSGV 259

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
           T  AA GV HT A+              SG +  WG    G+LG+G    R  P  V+ L
Sbjct: 260 TAIAAGGV-HTCALT------------GSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGL 306

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEE 512
                  ++ G   T ALT +G V+  G    GQLGD     +  P  V G    + VE 
Sbjct: 307 -PSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGL--PSGVET 363

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           IA GDYH   L S   V  WG    G+LG G T  R+ P  V  L    V +I  G   T
Sbjct: 364 IAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTARSTPVAVSGLP-SGVTAIAAGRLHT 422

Query: 573 AA 574
            A
Sbjct: 423 CA 424



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 120/342 (35%), Positives = 163/342 (47%), Gaps = 23/342 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V  IA GG H    T  G V+ WG    GRLG G  +D S P  +  L +  V  +A G 
Sbjct: 55  VTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPS-GVTAIAAGG 113

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
            HTCA+T SG+++ WG SN  +G LG G+  +   P  ++G   G  V++++ G WHT  
Sbjct: 114 AHTCALTSSGEVWCWG-SN-FYGQLGDGSYTTRSTPVAVSGLPSG--VTAIAAGGWHTCA 169

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
            TS+G ++ +G    G LG G     STP  V  L    T  AA G  HT A +      
Sbjct: 170 RTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSEVTAIAA-GDAHTCARM------ 222

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                 SSG+++ WG  + G+LG G       P  V+ L       ++ G   T ALT +
Sbjct: 223 ------SSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGL-PSGVTAIAAGGVHTCALTGS 275

Query: 475 GHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           G V   G+   GQLG+    G+  P  V G    + V  IA GDYH   LT    V+ WG
Sbjct: 276 GGVRCWGANYSGQLGNGLTFGRSTPGAVSGL--PSGVTAIAAGDYHTCALTGSGGVWCWG 333

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              +G+LG G T  R+ P  V  L    V++I  G   T A+
Sbjct: 334 GNYSGQLGDGTTTARSTPVAVSGLP-SGVETIAAGDYHTCAL 374



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 160/352 (45%), Gaps = 23/352 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P AV S +   V  IA G  H    T  G V+ WG+   G+LG G  +D S P  +  L 
Sbjct: 402 PVAV-SGLPSGVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLA 460

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           +  VE +A G  HTCA+T SG ++ WG    N G LG G+ +    P  ++G   G  V+
Sbjct: 461 S-GVETIAAGGWHTCALTGSGGVWCWG--RNNSGQLGDGSTIYHITPVAVSGLPSG--VT 515

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
           +++ G  HT  +T +G ++ +G    G LG G     STP  V  L    T  AA  + H
Sbjct: 516 AIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSGVTAIAAGDI-H 574

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           T A+              SG ++ WG  D G+LG G    R  P  V+ L       ++ 
Sbjct: 575 TCALT------------GSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGL-PSGVTAIAA 621

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
           G   T ALT +G V+  G  + GQL D   +   P  V G    + V  IA G ++    
Sbjct: 622 GLRYTCALTGSGGVWCWGYNLSGQLDDGTTSRSTPVAVSGL--PSGVTAIAAGGWYTCAR 679

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           TS   V  WG   +G+LG G T  R+ P  V  L    V +I  G   T A+
Sbjct: 680 TSSGGVRCWGANGSGQLGDGTTTKRSTPVAVSGLP-SGVTAIAAGGEHTCAL 730



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 170/368 (46%), Gaps = 40/368 (10%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G V+ WG+ + DG LG      GS+     DS  P AV S +   V+ IA GG H   
Sbjct: 427 SSGGVWCWGDNS-DGQLG-----DGSF----TDSSTPVAV-SGLASGVETIAAGGWHTCA 475

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGD 305
           +T  G V+ WG    G+LG G  S + H  P  +  L +  V  +A G  HTCA+T SG 
Sbjct: 476 LTGSGGVWCWGRNNSGQLGDG--STIYHITPVAVSGLPS-GVTAIAAGGVHTCALTGSGG 532

Query: 306 MYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           ++ WGG   NF G LG G       P  ++G   G  V++++ G  HT  +T +G ++ +
Sbjct: 533 VWCWGG---NFAGQLGDGTTTDRSTPVAVSGLPSG--VTAIAAGDIHTCALTGSGGVWCW 587

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G   FG LG G   + STP  V  L    T  AA G+ +T A+              SG 
Sbjct: 588 GGNDFGQLGDGTTTNRSTPVAVSGLPSGVTAIAA-GLRYTCALT------------GSGG 634

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           ++ WG    G+L  G   +R  P  V+ L       ++ G   T A T++G V   G+  
Sbjct: 635 VWCWGYNLSGQLDDG-TTSRSTPVAVSGL-PSGVTAIAAGGWYTCARTSSGGVRCWGANG 692

Query: 485 YGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            GQLGD     +  P  V G    + V  IA G  H   L S   V+ WG+  +G+LG G
Sbjct: 693 SGQLGDGTTTKRSTPVAVSGL--PSGVTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDG 750

Query: 544 DTDDRNFP 551
               R  P
Sbjct: 751 RPLYRTTP 758



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 7/171 (4%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   +   P AV S +   V  IA G R+   +T  G V+ WG  L G+L  G  S  S 
Sbjct: 598 GTTTNRSTPVAV-SGLPSGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTSR-ST 655

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P  +  L +  V  +A G  +TCA T SG +  WG +    G LG G       P  ++G
Sbjct: 656 PVAVSGLPS-GVTAIAAGGWYTCARTSSGGVRCWGANG--SGQLGDGTTTKRSTPVAVSG 712

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
              G  V++++ G  HT  + S+G ++ +G    G LG G  +  +TP +V
Sbjct: 713 LPSG--VTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDGRPLYRTTPVDV 761


>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
           niloticus]
          Length = 1384

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 170/355 (47%), Gaps = 57/355 (16%)

Query: 236 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
           ++++CGG H+A++T+ G +  +G    G+LG  +      P  + ALK+  V+L ACG  
Sbjct: 39  KHMSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKLAACGRD 98

Query: 296 HTCAVTLSGDMYTWGGSNCNFGL-LGHGNEMSL---------WLPKKLNGPLEGIHVSSV 345
           HT   T  G +Y+  GSN +  L LGH ++ +          W P K+           +
Sbjct: 99  HTIVCTFHGSVYS-AGSNQDGQLGLGHCDKSTYFHLLRPFCDWAPIKM-----------L 146

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 405
           S G   +A +T  G+LF +GD + G +  GD    + PREV    G   +  +CG  H+A
Sbjct: 147 SAGCNTSAALTEDGRLFMWGDNSVGQIAFGDEGFAAEPREVHV--GEAVIWVSCGYKHSA 204

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE--ARLVPTCVAALVEPNFCQVSC 463
            V               G+L+T+G+   GRLG   ++     VP  V  ++  +  +V C
Sbjct: 205 FVT------------VYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVL-GHVTRVCC 251

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVE-GKLTKNF----VEEIACGDY 518
           G   TV LT   +VYT G   YGQLG    +G     V   K  ++F    V  IACG+ 
Sbjct: 252 GGEHTVVLTEK-NVYTFGRGQYGQLG----HGTFLFEVHLPKALQHFCNSKVRHIACGEN 306

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-----PSLVEALKDKQVKSIVCG 568
           H AV+T    +YT+G G +G+LG G   + NF     P+L        V+S+ CG
Sbjct: 307 HTAVVTDSGLLYTFGDGRHGKLGLG---EENFINQFSPTLCTRFLQYAVQSVSCG 358



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 149/306 (48%), Gaps = 39/306 (12%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           LKN + + ++CG  H+  +T +G +  +GG+   +G LG   + S   P  +   L+   
Sbjct: 33  LKNDHPKHMSCGGEHSAVITENGRLLMFGGN--TWGQLGLRIKPSARKPTSVKA-LKSEK 89

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           V   +CG  HT V T  G +++ G   DG  G LGH D+ +               +R  
Sbjct: 90  VKLAACGRDHTIVCTFHGSVYSAGSNQDGQLG-LGHCDKSTY-----------FHLLRPF 137

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSS-GKLFTWGDGDRGRLGHGDK----EARLVPTCVAAL 453
           C  W  A +  +  G ++S+  +  G+LF WGD   G++  GD+    E R V    A +
Sbjct: 138 CD-W--APIKMLSAGCNTSAALTEDGRLFMWGDNSVGQIAFGDEGFAAEPREVHVGEAVI 194

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFV 510
                  VSCG+  +  +T  G +YT G    G+LG  K   AN ++P +V+G L    V
Sbjct: 195 W------VSCGYKHSAFVTVYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVL--GHV 246

Query: 511 EEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGT 569
             + CG  H  VLT +  VYT+G+G  G+LGHG    + + P  ++   + +V+ I CG 
Sbjct: 247 TRVCCGGEHTVVLTEKN-VYTFGRGQYGQLGHGTFLFEVHLPKALQHFCNSKVRHIACGE 305

Query: 570 SFTAAI 575
           + TA +
Sbjct: 306 NHTAVV 311



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 151/315 (47%), Gaps = 25/315 (7%)

Query: 217 VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
           +K  +  P +V++     V+  ACG  H  + T  G V+S G    G+LG G     ++ 
Sbjct: 72  IKPSARKPTSVKALKSEKVKLAACGRDHTIVCTFHGSVYSAGSNQDGQLGLGHCDKSTYF 131

Query: 277 KLIDALKN-INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
            L+    +   +++++ G + + A+T  G ++ WG  + + G +  G+E     P++++ 
Sbjct: 132 HLLRPFCDWAPIKMLSAGCNTSAALTEDGRLFMWG--DNSVGQIAFGDEGFAAEPREVHV 189

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISV-STPREVDSLKGLR 393
              G  V  VSCG  H+A VT  G+L+TFG+   G LG   ++++    P++V  + G  
Sbjct: 190 ---GEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVLG-H 245

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAA 452
             R  CG  HT  + E  V             +T+G G  G+LGHG     + +P  +  
Sbjct: 246 VTRVCCGGEHTVVLTEKNV-------------YTFGRGQYGQLGHGTFLFEVHLPKALQH 292

Query: 453 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN--GKLPTRVEGKLTKNFV 510
                   ++CG + T  +T +G +YT G   +G+LG  + N   +    +  +  +  V
Sbjct: 293 FCNSKVRHIACGENHTAVVTDSGLLYTFGDGRHGKLGLGEENFINQFSPTLCTRFLQYAV 352

Query: 511 EEIACGDYHVAVLTS 525
           + ++CG +H+ VL +
Sbjct: 353 QSVSCGGHHMLVLAT 367


>gi|323452281|gb|EGB08155.1| hypothetical protein AURANDRAFT_26269, partial [Aureococcus
           anophagefferens]
          Length = 369

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/320 (33%), Positives = 152/320 (47%), Gaps = 44/320 (13%)

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           V  V CG  H   +T +G++YTWG     FG LGHG+  SL  P+ + G L G+  + V+
Sbjct: 2   VAAVCCGGQHAAVLTAAGEVYTWG--RGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVA 59

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVL------GHGDRISVSTPREVDSLKG--LRTVRAA 398
           CG  +TA V++ G L+T+G G  G L      GHG    V TPR +D+  G  +R +   
Sbjct: 60  CGFAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREISVG 119

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE--------ARLVPTC- 449
            G +HT A+V            S   ++TWG    G+LG+ + +        A  VP   
Sbjct: 120 PGGYHTVALV------------SPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPR 167

Query: 450 -VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ--LGDP-------KANGKLPT 499
            V ++      +V  G   T  LT  G  Y  G    GQ  LGDP       + +   P 
Sbjct: 168 RVDSVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPD 227

Query: 500 -RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
            R+  +L    V +IACG  H   LT   EV++ G G  G+LGHG+ D+  FP +V  LK
Sbjct: 228 FRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLK 287

Query: 559 --DKQVKSIVCGTSFTAAIC 576
              + V  + CG + T  +C
Sbjct: 288 ASRRDVLEVACGNNGTLVLC 307



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 154/324 (47%), Gaps = 54/324 (16%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI-DALKNINVELVACG 293
           V  + CGG+HAA++T  GEV++WG    GRLGHG    +  P+L+  AL  +    VACG
Sbjct: 2   VAAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACG 61

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGL---LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
             +T AV+  G +YTWG G N   GL    GHG    +  P+ L+    G  V  +S GP
Sbjct: 62  FAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDA-FGGRAVREISVGP 120

Query: 350 --WHTAVVTSAGQLFTFGDGTFGVLGH--GDRIS--------VSTPREVDSLKGLRTVRA 397
             +HT  + S   ++T+G    G LG+   D +         V  PR VDS+ GLR  R 
Sbjct: 121 GGYHTVALVSPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRV 180

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA-----RLVPTCVAA 452
             G  HTA +             + G  +  G   +G+LG GD E+     R  P     
Sbjct: 181 VAGWGHTALLT------------AEGAAYVCGRNFQGQLGLGDPESFPHNERGHP----- 223

Query: 453 LVEPNF-----------CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV 501
             +P+F            Q++CG   +VALT  G V++ G+   GQLG    + +   RV
Sbjct: 224 -YQPDFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRV 282

Query: 502 EGKL--TKNFVEEIACGDYHVAVL 523
             +L  ++  V E+ACG+    VL
Sbjct: 283 VSRLKASRRDVLEVACGNNGTLVL 306



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 5/79 (6%)

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE-ALKDKQVKSIVCG 568
           V  + CG  H AVLT+  EVYTWG+G  GRLGHGD      P LV  AL       + CG
Sbjct: 2   VAAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACG 61

Query: 569 TSFTAAI----CLHKWVSG 583
            ++TAA+     L+ W +G
Sbjct: 62  FAYTAAVSAQGALYTWGAG 80



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 12/118 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-----VDSDVSHP-- 276
           P+ V+S   L V+ +  G  H AL+T +G  +  G    G+LG G       ++  HP  
Sbjct: 166 PRRVDSVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQ 225

Query: 277 ---KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK 331
              +L+D L    V  +ACG  H+ A+T  G++++ G    N G LGHGN  +   P+
Sbjct: 226 PDFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAG--NKGQLGHGNVDNEQFPR 281


>gi|307105210|gb|EFN53460.1| hypothetical protein CHLNCDRAFT_136724 [Chlorella variabilis]
          Length = 1660

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 9/183 (4%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP-KLIDALKNINVELVA 291
           LDV   A G +HAALVT  G V+ WGE  GG+LG G D D + P ++   L+      VA
Sbjct: 241 LDVYRAAVGRKHAALVTATGAVYCWGEGRGGKLGLGHDQDQAQPLRIRHGLQGQCAVAVA 300

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           CG+  T A+T  G+++ WG          H +     +P ++ G L G  V  VSCGP+H
Sbjct: 301 CGDDCTAALTDGGELFMWGRL--------HVDSRPQLVPLQVRGDLRGRKVVQVSCGPFH 352

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            A V+S GQLFT+G+G  G LGHGD+ + + P  V +L G + +  ACGVWH+AA+V   
Sbjct: 353 CAAVSSDGQLFTWGEGFGGKLGHGDQANRAHPSLVHALAGRQVLEVACGVWHSAAIVSEP 412

Query: 412 VGS 414
            GS
Sbjct: 413 EGS 415



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 94/185 (50%), Gaps = 18/185 (9%)

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
           L   RAA G  H A V             ++G ++ WG+G  G+LG G  + +  P  + 
Sbjct: 241 LDVYRAAVGRKHAALVT------------ATGAVYCWGEGRGGKLGLGHDQDQAQPLRIR 288

Query: 452 -ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFV 510
             L       V+CG   T ALT  G ++     ++G+L        +P +V G L    V
Sbjct: 289 HGLQGQCAVAVACGDDCTAALTDGGELF-----MWGRLHVDSRPQLVPLQVRGDLRGRKV 343

Query: 511 EEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
            +++CG +H A ++S  +++TWG+G  G+LGHGD  +R  PSLV AL  +QV  + CG  
Sbjct: 344 VQVSCGPFHCAAVSSDGQLFTWGEGFGGKLGHGDQANRAHPSLVHALAGRQVLEVACGVW 403

Query: 571 FTAAI 575
            +AAI
Sbjct: 404 HSAAI 408



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 91/193 (47%), Gaps = 39/193 (20%)

Query: 422 SGKLFTWG--------------DGDRGRLGHGDKE---ARLVPTCVAALVEPNFCQ-VSC 463
           SG L+TWG              D ++G LGHGD +    +L+PT V   +E    + V+ 
Sbjct: 486 SGALYTWGAVSESVAFGASEKRDSNKGCLGHGDGDLYRGQLLPTRVGGALEARQVRHVAA 545

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGD----PKANGKLPTRVEGKLTKNFVEEIACGDYH 519
           G  LTVA+TT G V+ MG+   G  G     P     LP  V G L   FV+E+ CG +H
Sbjct: 546 GSHLTVAVTTGGRVFQMGA--TGASGPARHCPWEGATLPELVRGALQGYFVDELCCGMHH 603

Query: 520 VAVLTSRT--------------EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
            A  T R                 + WG+G+ G+LG    DD   P LVE LK + V  +
Sbjct: 604 AAA-TGRPLDRKLGRPADHAPRAAFAWGRGSEGQLGVKGFDDSTAPVLVEGLKGRHVLQV 662

Query: 566 VCGTSFTAAICLH 578
            CG S + A+C H
Sbjct: 663 ACGGSNSLAVCEH 675



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 930  ATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQW 989
            ++T + + T    PA  DEW E+ E GV++T  +   G K L+R+RF+R  FS   A+QW
Sbjct: 1239 SSTGSASGTQPGSPAAADEWTEEFEEGVFLTFTS-EAGAKKLRRIRFNRSLFSATSAKQW 1297

Query: 990  WAANRARVYQQYNVSMV 1006
            +  N+ R+ Q      V
Sbjct: 1298 YEVNKHRLAQPTGTPRV 1314


>gi|118402069|ref|XP_001033354.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila]
 gi|89287702|gb|EAR85691.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila SB210]
          Length = 1294

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 170/346 (49%), Gaps = 31/346 (8%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELV 290
           L ++ ++CG  H+A +T++G +++ G    G+LG    S  S   P L++ L  I    +
Sbjct: 58  LIIRTVSCGEEHSAFITQRGHIYTIGSNEDGKLGISTKSITSSSTPCLVEDLSKIKCLSL 117

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
           +CG+ HT AV  +G++Y WG  +  +G LG+G++ S + P ++    E      V CG  
Sbjct: 118 SCGQSHTIAVMQNGEVYGWGDGS--YGQLGNGSQESRFAPTRIVS--ENNEFIQVQCGSR 173

Query: 351 HTAVVTSAGQLFTFGDGTFGVLG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           HT ++    + +  G    G LG    +I +   +++D+ KG   + AACG +H+  + E
Sbjct: 174 HTILLDLKKKAYVCGSNENGQLGLRSTKIELFI-KKLDN-KGF--IEAACGQFHSLLLDE 229

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
                        G++++ G    G+LG G K  +   T + +L      +++ G S + 
Sbjct: 230 ------------QGRVYSTGANSFGQLGIGTKNNQYEFTQINSLEGEQIVKIAAG-SHSA 276

Query: 470 ALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           AL   G +Y  G+ V+G+          P ++    +     +I+ G++  A +     V
Sbjct: 277 ALNKKGEMYIWGTGVFGEYL-------FPNKINRHSSGTTFSDISVGNFFAAAVDINGAV 329

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +TWG  +NG LG GD + +  P  ++ALK + V+ I CG  F  A+
Sbjct: 330 WTWGANSNGELGQGDYEPKTLPQTLQALKGRHVQKICCGGGFAMAL 375



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 39/280 (13%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  VE    +   +++CG  H   V + GEV+ WG+   G+LG+G       P  I +  
Sbjct: 103 PCLVEDLSKIKCLSLSCGQSHTIAVMQNGEVYGWGDGSYGQLGNGSQESRFAPTRIVSEN 162

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           N  ++ V CG  HT  + L    Y   GSN N  L     ++ L++ K     L+     
Sbjct: 163 NEFIQ-VQCGSRHTILLDLKKKAYVC-GSNENGQLGLRSTKIELFIKK-----LDNKGFI 215

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG--- 400
             +CG +H+ ++   G++++ G  +FG LG G + +     +++SL+G + V+ A G   
Sbjct: 216 EAACGQFHSLLLDEQGRVYSTGANSFGQLGIGTKNNQYEFTQINSLEGEQIVKIAAGSHS 275

Query: 401 ----------VWHTAAVVEVM----VGSSSS----SNCSSGKLF-----------TWGDG 431
                     +W T    E +    +   SS    S+ S G  F           TWG  
Sbjct: 276 AALNKKGEMYIWGTGVFGEYLFPNKINRHSSGTTFSDISVGNFFAAAVDINGAVWTWGAN 335

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
             G LG GD E + +P  + AL   +  ++ CG    +AL
Sbjct: 336 SNGELGQGDYEPKTLPQTLQALKGRHVQKICCGGGFAMAL 375



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 3/102 (2%)

Query: 485 YGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YGQLG   K  GK  T  +       +  ++CG+ H A +T R  +YT G   +G+LG  
Sbjct: 34  YGQLGLGHKHQGKNYTIPKICCYNLIIRTVSCGEEHSAFITQRGHIYTIGSNEDGKLGIS 93

Query: 544 DTDDRNF--PSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 583
                +   P LVE L   +  S+ CG S T A+  +  V G
Sbjct: 94  TKSITSSSTPCLVEDLSKIKCLSLSCGQSHTIAVMQNGEVYG 135


>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
 gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
          Length = 419

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 183/368 (49%), Gaps = 46/368 (12%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKLIDALKNINVELV 290
           ++++I+CGG H   +T+ G V++ G    G+LG  V ++ ++   P  +  LK   V++ 
Sbjct: 66  NLKSISCGGAHTLFLTETGRVYATGLNDFGQLG--VSNNTTYCMEPLEVSGLKKEIVQIS 123

Query: 291 ACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           A G HH+CA+T+ G++YTWG  SN   GL G   E  + +P K+   L GI++  V+   
Sbjct: 124 A-GYHHSCAITVDGELYTWGKNSNGQLGL-GKKAENVVPVPTKVE-CLSGINIKMVALAS 180

Query: 350 WHTAVVTSAGQLFTFGDGTF---------GVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            H+  VT  GQ  ++G G            +LG     S  TPR +  L+G++    A G
Sbjct: 181 EHSIAVTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAG 240

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
           + H+A + E            +G ++ +G+    +L  GD      P+ +  L  P   +
Sbjct: 241 LLHSACIDE------------NGSVYIFGEKAVDKLAFGDANNATTPSMIGKL--PYSQE 286

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYH 519
           V+CG   T  +T+ G +YT GS   G LG+   +   +P RVEG   ++ VE+++CG  H
Sbjct: 287 VACGGYHTCVITSGGELYTWGSNENGCLGNGSIDVLHIPERVEGPFLRSPVEKVSCGWKH 346

Query: 520 VAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
            A + S   V+TWG G +            G+LGHGD  D   P+LV   K  +   + C
Sbjct: 347 TAAI-SEGNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSC 405

Query: 568 GTSFTAAI 575
           G + T AI
Sbjct: 406 GFNHTGAI 413



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 148/325 (45%), Gaps = 15/325 (4%)

Query: 257 WGEELGGRLGHGVDSDVSHPKLIDA--LKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 314
           WG    GRLG+G    +  PKL+++    N N++ ++CG  HT  +T +G +Y  G ++ 
Sbjct: 35  WGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHTLFLTETGRVYATGLND- 93

Query: 315 NFGLLGHGNEMSLWL-PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
            FG LG  N  +  + P +++G  +   +  +S G  H+  +T  G+L+T+G  + G LG
Sbjct: 94  -FGQLGVSNNTTYCMEPLEVSGLKK--EIVQISAGYHHSCAITVDGELYTWGKNSNGQLG 150

Query: 374 HGDRIS--VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
            G +    V  P +V+ L G+     A    H+ AV +   G  + S    G        
Sbjct: 151 LGKKAENVVPVPTKVECLSGINIKMVALASEHSIAVTD---GGQALSWGGGGSGRLGHGH 207

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
               LG     +   P  +  L       ++ G   +  +   G VY  G     +L   
Sbjct: 208 QSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDKLAFG 267

Query: 492 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
            AN      + GKL   + +E+ACG YH  V+TS  E+YTWG   NG LG+G  D  + P
Sbjct: 268 DANNATTPSMIGKLP--YSQEVACGGYHTCVITSGGELYTWGSNENGCLGNGSIDVLHIP 325

Query: 552 SLVEA-LKDKQVKSIVCGTSFTAAI 575
             VE       V+ + CG   TAAI
Sbjct: 326 ERVEGPFLRSPVEKVSCGWKHTAAI 350



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 17/200 (8%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           + P+ ++    + V+NIA G  H+A + + G V+ +GE+   +L  G  ++ + P +I  
Sbjct: 221 YTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDKLAFGDANNATTPSMIGK 280

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L     + VACG +HTC +T  G++YTWG SN N G LG+G+   L +P+++ GP     
Sbjct: 281 LPY--SQEVACGGYHTCVITSGGELYTWG-SNEN-GCLGNGSIDVLHIPERVEGPFLRSP 336

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRISVSTPREVDSL 389
           V  VSCG  HTA + S G +FT+G     GTF        G LGHGD      P  V   
Sbjct: 337 VEKVSCGWKHTAAI-SEGNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFE 395

Query: 390 KGLRTVRAACGVWHTAAVVE 409
           K ++ +  +CG  HT A++E
Sbjct: 396 KKMKALEVSCGFNHTGAILE 415



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 4/166 (2%)

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV--AALVEPNFCQVSCGHSLTVAL 471
           SSSSS         WG+GD GRLG+G+ ++   P  +  ++    N   +SCG + T+ L
Sbjct: 21  SSSSSEGRKRSAAVWGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHTLFL 80

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
           T TG VY  G   +GQLG           +E    K  + +I+ G +H   +T   E+YT
Sbjct: 81  TETGRVYATGLNDFGQLGVSNNTTYCMEPLEVSGLKKEIVQISAGYHHSCAITVDGELYT 140

Query: 532 WGKGANGRLGHGDTDDR--NFPSLVEALKDKQVKSIVCGTSFTAAI 575
           WGK +NG+LG G   +     P+ VE L    +K +   +  + A+
Sbjct: 141 WGKNSNGQLGLGKKAENVVPVPTKVECLSGINIKMVALASEHSIAV 186



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 136/307 (44%), Gaps = 54/307 (17%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF--VPKAVESAVVLDVQNIACGGRHAAL 247
           G+++ WG+   +G LG          G K ++   VP  VE    ++++ +A    H+  
Sbjct: 136 GELYTWGK-NSNGQLG---------LGKKAENVVPVPTKVECLSGINIKMVALASEHSIA 185

Query: 248 VTKQGEVFSWGEELGGR---------LGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           VT  G+  SWG    GR         LG    S    P+ I  L+ + V+ +A G  H+ 
Sbjct: 186 VTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSA 245

Query: 299 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            +  +G +Y +G    +    G  N  +      + G L   +   V+CG +HT V+TS 
Sbjct: 246 CIDENGSVYIFGEKAVDKLAFGDANNAT---TPSMIGKLP--YSQEVACGGYHTCVITSG 300

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT--VRAACGVWHTAAVVEVMVGSSS 416
           G+L+T+G    G LG+G    +  P  V+    LR+   + +CG  HTAA+ E       
Sbjct: 301 GELYTWGSNENGCLGNGSIDVLHIPERVEG-PFLRSPVEKVSCGWKHTAAISE------- 352

Query: 417 SSNCSSGKLFTWGDGDR------------GRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
                 G +FTWG G              G+LGHGD    + PT VA   +    +VSCG
Sbjct: 353 ------GNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCG 406

Query: 465 HSLTVAL 471
            + T A+
Sbjct: 407 FNHTGAI 413



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 26/130 (20%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLD-VQNIACGGRHAAL 247
           G+++ WG    +G LG G           +D   +P+ VE   +   V+ ++CG +H A 
Sbjct: 301 GELYTWGS-NENGCLGNG----------SIDVLHIPERVEGPFLRSPVEKVSCGWKHTAA 349

Query: 248 VTKQGEVFSWGE------------ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
           ++ +G VF+WG               GG+LGHG D D  +P L+   K +    V+CG +
Sbjct: 350 IS-EGNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCGFN 408

Query: 296 HTCAVTLSGD 305
           HT A+  S D
Sbjct: 409 HTGAILESVD 418


>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Strongylocentrotus purpuratus]
          Length = 782

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 171/332 (51%), Gaps = 25/332 (7%)

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
           ++T+ G ++ +G    G+LG G    V+ P  +  LK+  V  +ACG  HT A+T    +
Sbjct: 44  VITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKDRHL 103

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           +++G      G LG G+      P+ +   LE      +SCG  H+A +T++G L+ +G 
Sbjct: 104 HSFGAG--GEGQLGVGDSKQYEAPRMIEE-LEEQDYLLLSCGTDHSAALTASGTLYMWGG 160

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G+ G LGHG+   V  PRE+     +R V  +CG +HTA + E              KL+
Sbjct: 161 GSEGQLGHGEDTEVQIPRELSMGVPVRMV--SCGYYHTALLTE------------DKKLY 206

Query: 427 TWGDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           T+G+G+ G+LG G+     V  P  V+   EP    VSCG++ T A+T  GHVYT G+  
Sbjct: 207 TFGEGEGGKLGLGEAHLGGVNEPQHVSFFTEP-VDSVSCGNAHTAAITEKGHVYTFGNGA 265

Query: 485 YGQLGD--PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            GQLG         +P RV  +L     + ++CGD H A++T++  +YT+G G +G+LG 
Sbjct: 266 SGQLGHGPDHLETNIPKRV-ARLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGKLGQ 324

Query: 543 GDTDDRNF--PSLVEALKDKQVKSIVCGTSFT 572
           G+    N   PS V       V+ + CG   T
Sbjct: 325 GEESFSNVFTPSKVHRFNGFLVEEVSCGGCHT 356



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 156/317 (49%), Gaps = 41/317 (12%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P +V+      V  IACG  H   +TK   + S+G    G+LG G       P++I+ L+
Sbjct: 73  PSSVKGLKHAGVVKIACGRVHTIALTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELE 132

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
             +  L++CG  H+ A+T SG +Y WGG   + G LGHG +  + +P++L+    G+ V 
Sbjct: 133 EQDYLLLSCGTDHSAALTASGTLYMWGGG--SEGQLGHGEDTEVQIPRELS---MGVPVR 187

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGT----------FGVLGHGDRISVSTPREVDSLKGLR 393
            VSCG +HTA++T   +L+TFG+G            G +     +S  T   VDS+    
Sbjct: 188 MVSCGYYHTALLTEDKKLYTFGEGEGGKLGLGEAHLGGVNEPQHVSFFT-EPVDSV---- 242

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG-DKEARLVPTCVAA 452
               +CG  HTAA+ E             G ++T+G+G  G+LGHG D     +P  VA 
Sbjct: 243 ----SCGNAHTAAITE------------KGHVYTFGNGASGQLGHGPDHLETNIPKRVAR 286

Query: 453 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNF 509
           L       VSCG   T  +T  G +YT G   +G+LG  +   +N   P++V  +     
Sbjct: 287 LEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGKLGQGEESFSNVFTPSKVH-RFNGFL 345

Query: 510 VEEIACGDYHVAVLTSR 526
           VEE++CG  H  V   R
Sbjct: 346 VEEVSCGGCHTLVRARR 362



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 144/290 (49%), Gaps = 23/290 (7%)

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           +T +G +Y +G ++  +G LG G+  S+  P  + G L+   V  ++CG  HT  +T   
Sbjct: 45  ITENGRLYVFGAND--WGQLGLGHRKSVNKPSSVKG-LKHAGVVKIACGRVHTIALTKDR 101

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            L +FG G  G LG GD      PR ++ L+    +  +CG  H+AA+            
Sbjct: 102 HLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLSCGTDHSAALT----------- 150

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
            +SG L+ WG G  G+LGHG+     +P  ++  V      VSCG+  T  LT    +YT
Sbjct: 151 -ASGTLYMWGGGSEGQLGHGEDTEVQIPRELSMGVPVRM--VSCGYYHTALLTEDKKLYT 207

Query: 480 MGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
            G    G+LG  +A+ G +            V+ ++CG+ H A +T +  VYT+G GA+G
Sbjct: 208 FGEGEGGKLGLGEAHLGGVNEPQHVSFFTEPVDSVSCGNAHTAAITEKGHVYTFGNGASG 267

Query: 539 RLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 583
           +LGHG D  + N P  V  L+  + K + CG   TA +    CL+ +  G
Sbjct: 268 QLGHGPDHLETNIPKRVARLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDG 317



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 6/171 (3%)

Query: 448 TCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLT 506
           TC  +  E N           V +T  G +Y  G+  +GQLG   + +   P+ V+G L 
Sbjct: 22  TCPLSFPELNCSPFPFLFFFDVVITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKG-LK 80

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
              V +IACG  H   LT    ++++G G  G+LG GD+     P ++E L+++    + 
Sbjct: 81  HAGVVKIACGRVHTIALTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLS 140

Query: 567 CGTSFTAAI----CLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYC 613
           CGT  +AA+     L+ W  G +  +  G        R+        +V C
Sbjct: 141 CGTDHSAALTASGTLYMWGGGSEGQLGHGEDTEVQIPRELSMGVPVRMVSC 191



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 157 HLKGLSGDTFRVSLSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHRSGSYA 215
           HL G++        +  V S S G+ H       G V+ +G     G LG G        
Sbjct: 222 HLGGVNEPQHVSFFTEPVDSVSCGNAHTAAITEKGHVYTFGN-GASGQLGHGPDH----- 275

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD--SDV 273
              +++ +PK V        + ++CG  H A+VT +G ++++G+   G+LG G +  S+V
Sbjct: 276 ---LETNIPKRVARLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGKLGQGEESFSNV 332

Query: 274 SHPKLIDALKNINVELVACGEHHT 297
             P  +       VE V+CG  HT
Sbjct: 333 FTPSKVHRFNGFLVEEVSCGGCHT 356


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 180/361 (49%), Gaps = 41/361 (11%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLIDALKNINVELVACG 293
           VQ ++ G +H+  + K G + S G+   G+LG  G +S +     I +L+   +  V+CG
Sbjct: 36  VQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNSRIEQ---ISSLEAQTIVDVSCG 92

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPWH 351
            +H+ A+   G++Y+WG GS    G LG G   S  + PK++ G L    +  +SCG +H
Sbjct: 93  TNHSVAMCDEGNIYSWGDGSE---GQLGTGKFSSKNFTPKRITGLLNR-KIIQISCGNFH 148

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +  +   G++F++G    G LG G +I + +TP+ V SLKG+  V+   G          
Sbjct: 149 SVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAG---------- 198

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGD--KEARLVPTCVAALVEPNFCQVSCGHSLT 468
             GS + +   SG +F WG  + G+LG  +  K+    P  V +L +     +SCG   T
Sbjct: 199 --GSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHT 256

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAV-LTSR 526
             L   G VYT G   YGQLG    N   +P ++E    +  V ++ACG YH  + + + 
Sbjct: 257 AVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQ--VSQVACGRYHTLLYVFTC 314

Query: 527 TEVYTWGKGANGRLGHGDTDDR----------NFPSLVEA--LKDKQVKSIVCGTSFTAA 574
             + ++GKG+  + G+ ++ D+          +  SLV A  LKD  VK I  G +   A
Sbjct: 315 NRIVSFGKGSQRQQGNDESSDQAEASQLPSAFDISSLVPANDLKDVNVKWIFAGNNVGFA 374

Query: 575 I 575
           +
Sbjct: 375 V 375



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 116/222 (52%), Gaps = 16/222 (7%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+++ WG+ + +G LG G   S         +F PK +   +   +  I+CG  H+  + 
Sbjct: 103 GNIYSWGDGS-EGQLGTGKFSS--------KNFTPKRITGLLNRKIIQISCGNFHSVALA 153

Query: 250 KQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           + G VFSWG+   G+LG G    + + P+L+ +LK I +  V  G   T A+++SG ++ 
Sbjct: 154 EDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFA 213

Query: 309 WGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           WG +N   G LG  N+     + P  ++  L  + V+ +SCG  HTAV+   G ++TFGD
Sbjct: 214 WGRNNA--GQLGFKNDAKKGTFKPYAVDS-LRDLGVAYISCGEEHTAVLNKDGIVYTFGD 270

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            T+G LG       S P++++     +  + ACG +HT   V
Sbjct: 271 DTYGQLGQQSGNQTSVPQKIEEYSR-QVSQVACGRYHTLLYV 311



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 27/272 (9%)

Query: 206 GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 265
           G + R G+ + ++  S    ++E+  ++DV   +CG  H+  +  +G ++SWG+   G+L
Sbjct: 64  GQLGRKGNNSRIEQIS----SLEAQTIVDV---SCGTNHSVAMCDEGNIYSWGDGSEGQL 116

Query: 266 GHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 324
           G G   S    PK I  L N  +  ++CG  H+ A+   G +++WG + C  G LG G++
Sbjct: 117 GTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKC--GQLGLGSQ 174

Query: 325 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST-- 382
           +      +L   L+GI +  V+ G   T  ++ +G +F +G    G LG  +     T  
Sbjct: 175 IINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFK 234

Query: 383 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE 442
           P  VDSL+ L     +CG  HTA + +             G ++T+GD   G+LG     
Sbjct: 235 PYAVDSLRDLGVAYISCGEEHTAVLNK------------DGIVYTFGDDTYGQLGQQSGN 282

Query: 443 ARLVPTCVAALVEPNFCQVSCG--HSLTVALT 472
              VP  +         QV+CG  H+L    T
Sbjct: 283 QTSVPQKIEEYSR-QVSQVACGRYHTLLYVFT 313


>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 954

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 170/376 (45%), Gaps = 40/376 (10%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-----VSHP 276
             P+ V+      +  IACGG H   ++  G+V+S  +       H + +      +  P
Sbjct: 229 LTPQKVDVLPGQSIAEIACGGNHILYLSSAGDVYSSED-------HAISTTEPTNMLQTP 281

Query: 277 KLID------ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP 330
           +L+       AL    +  +ACG  H+ A+T +G++Y+WG      G LGHG      +P
Sbjct: 282 QLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGED--GRLGHGEMRDRNVP 339

Query: 331 KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS-- 388
           +K+   L    +  VSCG  HTAVV+    +FTFG G  G LG GD     TP+EV +  
Sbjct: 340 RKIMALLRH-RIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWG 398

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVP 447
            +  R ++  CG W+    + +            G++F+WG    G+ G G   +  L P
Sbjct: 399 FRKQRIIKVVCG-WNFTIALSL-----------EGRVFSWGKQSEGQCGLGFCDQDELSP 446

Query: 448 TCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTK 507
             +  L++     V+CG++ ++ALT+   V + G   YGQLG        P  ++  L  
Sbjct: 447 CLIEKLLDNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQSLFA 506

Query: 508 ---NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKS 564
                 + I CG +H  +      +Y WG  + G  G G T +R+ P   +   +     
Sbjct: 507 CEGGHPQRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRDIPERNDFFANIDTDV 566

Query: 565 IV-CGTSFTAAICLHK 579
           ++ CG  +T A+ + K
Sbjct: 567 VLCCGHKYTIALEVDK 582



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 144/306 (47%), Gaps = 30/306 (9%)

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
           L  K   VF WG   G    + + +    P+ +D L   ++  +ACG +H   ++ +GD+
Sbjct: 206 LDQKCARVFLWGRPPGWSHTNSLLT----PQKVDVLPGQSIAEIACGGNHILYLSSAGDV 261

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPK-----KLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
           Y    S+ +  +        L  P+      L   L    +  ++CG  H+  +TSAG++
Sbjct: 262 Y----SSEDHAISTTEPTNMLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEV 317

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +++G G  G LGHG+    + PR++ +L   R    +CG  HTA V +            
Sbjct: 318 YSWGSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYVSCGGSHTAVVSD------------ 365

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAA--LVEPNFCQVSCGHSLTVALTTTGHVYT 479
              +FT+G G  GRLG GD +    P  V      +    +V CG + T+AL+  G V++
Sbjct: 366 QNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFS 425

Query: 480 MGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
            G    GQ  LG    +   P  +E KL  N + ++ACG  H   LTS+ EV +WG G  
Sbjct: 426 WGKQSEGQCGLGFCDQDELSPCLIE-KLLDNRIVDVACGYTHSLALTSQHEVLSWGLGEY 484

Query: 538 GRLGHG 543
           G+LG G
Sbjct: 485 GQLGRG 490



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 133/295 (45%), Gaps = 40/295 (13%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G+V+ WG    DG LG G  R         D  VP+ + + +   ++ ++CGG H A+
Sbjct: 313 SAGEVYSWGS-GEDGRLGHGEMR---------DRNVPRKIMALLRHRIEYVSCGGSHTAV 362

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA--LKNINVELVACGEHHTCAVTLSGD 305
           V+ Q  VF++G    GRLG G       P+ +     +   +  V CG + T A++L G 
Sbjct: 363 VSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIALSLEGR 422

Query: 306 MYTWGGS---NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           +++WG      C  G     +E+S  L +KL   L+   +  V+CG  H+  +TS  ++ 
Sbjct: 423 VFSWGKQSEGQCGLGFCDQ-DELSPCLIEKL---LDN-RIVDVACGYTHSLALTSQHEVL 477

Query: 363 TFGDGTFGVLGHGDRISVSTPREVD----SLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
           ++G G +G LG G  +   +P  +D    + +G    R  CG +H+              
Sbjct: 478 SWGLGEYGQLGRGI-VYQPSPESIDQSLFACEGGHPQRIYCGAFHSIITA---------- 526

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVP--TCVAALVEPNFCQVSCGHSLTVAL 471
              S  L+ WG    G  G G    R +P      A ++ +   + CGH  T+AL
Sbjct: 527 --GSKILYAWGLNSYGACGLGHTLNRDIPERNDFFANIDTDVV-LCCGHKYTIAL 578


>gi|223997658|ref|XP_002288502.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975610|gb|EED93938.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 597

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 150/302 (49%), Gaps = 20/302 (6%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           VF+WG  TG G+LG     S S   V  ++  P+ VE     ++   + G  HA  V+K 
Sbjct: 164 VFVWGG-TGVGLLG---FTSSSKQNVMFET--PQLVEELNGEEIIKTSIGSSHACAVSKG 217

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G++F WG    G LG G  ++V  PK ++ L  I V  V  GE H C  T   ++Y WG 
Sbjct: 218 GDLFVWGNGSFGVLGTGDTNNVDTPKCLNTLDKIAVVDVVTGEKHACIKTSQHELYAWG- 276

Query: 312 SNCNFGLLGHG-NEMSLWL--PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            +C  G LG G N+ +++L  P  +  P     V  ++CG  HT   TS+  +F++G G 
Sbjct: 277 -HCANGRLGIGNNDEAVFLSSPHPIRMPTSE-KVRFIACGAEHTLACTSS-TVFSWGSGD 333

Query: 369 FGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            G LGHG   S    P E+ +LKG   +    G WH+A V+ + +         SG L+T
Sbjct: 334 GGRLGHGSDCSDRWEPTEIVALKGSHVLDLGAGTWHSACVIAIPLMK------DSGWLYT 387

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG G +G+LG G       P  V  L +     V CG S   A+ + G++YT GS  +G 
Sbjct: 388 WGSGYQGQLGQGTVCKSSTPALVTGLCDAFVSAVFCGSSHNAAIASDGNLYTWGSNKHGA 447

Query: 488 LG 489
           LG
Sbjct: 448 LG 449



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 156/350 (44%), Gaps = 43/350 (12%)

Query: 249 TKQGEVFSWGEELGGRLGHGVDSD----VSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
           T Q +VF WG    G LG    S        P+L++ L    +   + G  H CAV+  G
Sbjct: 159 THQHQVFVWGGTGVGLLGFTSSSKQNVMFETPQLVEELNGEEIIKTSIGSSHACAVSKGG 218

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           D++ WG  N +FG+LG G+  ++  PK LN  L+ I V  V  G  H  + TS  +L+ +
Sbjct: 219 DLFVWG--NGSFGVLGTGDTNNVDTPKCLN-TLDKIAVVDVVTGEKHACIKTSQHELYAW 275

Query: 365 G---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           G   +G  G+  + + + +S+P  +      +    ACG  HT A             C+
Sbjct: 276 GHCANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRFIACGAEHTLA-------------CT 322

Query: 422 SGKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCG--HSLTVA----LTTT 474
           S  +F+WG GD GRLGHG D   R  PT + AL   +   +  G  HS  V     +  +
Sbjct: 323 SSTVFSWGSGDGGRLGHGSDCSDRWEPTEIVALKGSHVLDLGAGTWHSACVIAIPLMKDS 382

Query: 475 GHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           G +YT GS   GQLG         P  V G L   FV  + CG  H A + S   +YTWG
Sbjct: 383 GWLYTWGSGYQGQLGQGTVCKSSTPALVTG-LCDAFVSAVFCGSSHNAAIASDGNLYTWG 441

Query: 534 KGANGRLGHGDTDDRN-----------FPSLVEALKDKQVKSIVCGTSFT 572
              +G LG    +              F ++V  +     +S+ CG  +T
Sbjct: 442 SNKHGALGRLIEEKSTAFTPHPGIVIEFGTIVNRIGRGLPRSVTCGRDYT 491



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 170/359 (47%), Gaps = 38/359 (10%)

Query: 243 RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAV 300
           R  A + +QG V+  G+   G+LG G  +D     +I + +  +V  V+   G + + A 
Sbjct: 99  RRIADLEEQGAVYCAGKNNAGQLGLGDWNDRQCFTVIRSTRGKHVHHVSTSNGANISFAT 158

Query: 301 TLSGDMYTWGGSNCNFGLLGH---GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           T    ++ WGG+    GLLG      +  ++   +L   L G  +   S G  H   V+ 
Sbjct: 159 THQHQVFVWGGTG--VGLLGFTSSSKQNVMFETPQLVEELNGEEIIKTSIGSSHACAVSK 216

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G LF +G+G+FGVLG GD  +V TP+ +++L  +             AVV+V+ G   +
Sbjct: 217 GGDLFVWGNGSFGVLGTGDTNNVDTPKCLNTLDKI-------------AVVDVVTGEKHA 263

Query: 418 S-NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV---SCGHSLTVALTT 473
               S  +L+ WG    GRLG G+ +  +  +    +  P   +V   +CG   T+A T+
Sbjct: 264 CIKTSQHELYAWGHCANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRFIACGAEHTLACTS 323

Query: 474 TGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIACGDYH------VAVLTS 525
           +  V++ GS   G+LG     ++   PT +   L  + V ++  G +H      + ++  
Sbjct: 324 ST-VFSWGSGDGGRLGHGSDCSDRWEPTEIVA-LKGSHVLDLGAGTWHSACVIAIPLMKD 381

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
              +YTWG G  G+LG G     + P+LV  L D  V ++ CG+S  AAI     L+ W
Sbjct: 382 SGWLYTWGSGYQGQLGQGTVCKSSTPALVTGLCDAFVSAVFCGSSHNAAIASDGNLYTW 440


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 173/359 (48%), Gaps = 37/359 (10%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD---VQNIACGGRHAALV 248
           +  WG  +G G LG G     S A V    F P+   S  V D   ++ +ACG +H+  +
Sbjct: 2   MLCWGS-SGAGQLGIG----ASEASV----FEPR---SCCVFDGRGLKEVACGNQHSLFL 49

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
              G V++ G    G+LGH  D   S P+L+ AL    +  V+CG+ H+ AV   G ++ 
Sbjct: 50  LHDGSVYTCGSNSCGQLGH--DKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFA 107

Query: 309 WGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG  +   G LG G  E ++ +P+ +    E   +S V CG  H   ++  GQLF +G+ 
Sbjct: 108 WGAGDG--GQLGLGTAEEAVRVPRLIKKLCEH-RISQVMCGNHHCIALSKDGQLFVWGEN 164

Query: 368 TFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           + G LG G    S  +P+ + SL G+   + + G            G  S +   SG +F
Sbjct: 165 SSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAG------------GDHSFALSFSGAVF 212

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            WG    G+LG  D++ R VP  +  L       +SCG   T ALT  G ++T G+   G
Sbjct: 213 GWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKG 272

Query: 487 QLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHG 543
           QLG D   N  LP RV  +L    V +IACG  H +A + S   +Y +G    G+LG G
Sbjct: 273 QLGHDSTRNEPLPRRVM-ELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 154/326 (47%), Gaps = 22/326 (6%)

Query: 254 VFSWGEELGGRLGHGV-DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           +  WG    G+LG G  ++ V  P+         ++ VACG  H+  +   G +YT G +
Sbjct: 2   MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSN 61

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
           +C  G LGH    S     +L G L+   +S VSCG  H+  V   GQ+F +G G  G L
Sbjct: 62  SC--GQLGHDKGGS---RPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQL 116

Query: 373 GHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           G G    +V  PR +  L   R  +  CG  H  A+ +             G+LF WG+ 
Sbjct: 117 GLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSK------------DGQLFVWGEN 164

Query: 432 DRGRLGHGDKE-ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG- 489
             G+LG G  E + L P  + +L      Q+S G   + AL+ +G V+  G    GQLG 
Sbjct: 165 SSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGL 224

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
           + + +  +P  ++   ++  V  I+CG+ H A LT    ++T+G G+ G+LGH  T +  
Sbjct: 225 NDEQDRAVPCHIKFLRSQKVVY-ISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEP 283

Query: 550 FPSLVEALKDKQVKSIVCGTSFTAAI 575
            P  V  L   +V  I CG + T A 
Sbjct: 284 LPRRVMELMGTEVSQIACGRNHTLAF 309


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 166/362 (45%), Gaps = 26/362 (7%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   D   P AV S +   V  IA GG H   +   G V+ WG+   G+LG G  +D S 
Sbjct: 204 GTTTDRSTPVAV-SGLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRST 262

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLN 334
           P  +  L +  V  +A G  HTCA T SG +  WG    N+ G LG G   +   P  ++
Sbjct: 263 PVAVSGLAS-GVTAIAAGGFHTCARTSSGGVMCWG---ANWSGQLGDGTTTARSTPVAVS 318

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
           G   G  V++++ G  HT  +TS+G ++ +G   FG LG G     STP  V  L    T
Sbjct: 319 GLASG--VTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGLGSGVT 376

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
             AA G +HT A++            SSG +  WG    G+LG G    R  P  V+ LV
Sbjct: 377 AIAA-GDFHTCALM------------SSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLV 423

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEI 513
                 ++ G   T A T++G V   G    GQLGD     +  P  V G    + V  I
Sbjct: 424 S-GVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL--GSGVTAI 480

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           A G  H   L S   V+ WG+ ++G+LG G T DR  P  V  L   +V +I  G   T 
Sbjct: 481 AAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPVAVSGLP-SEVTAIASGGVHTC 539

Query: 574 AI 575
           A+
Sbjct: 540 AL 541



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 171/389 (43%), Gaps = 36/389 (9%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G V  WG   G G LG          G   D   P AV S +   V  IA G  H   
Sbjct: 84  SSGGVMCWGR-NGFGQLG---------DGTTTDRSTPVAV-SGLTSGVTAIAAGYAHTCA 132

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +   G V  WG+   G+LG G  +D S P  +  L +  V  +A G+ HTCA T SG + 
Sbjct: 133 LMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLAS-GVTAIAAGDDHTCARTSSGGVM 191

Query: 308 TWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            WG    N+ G LG G       P  ++G   G  V++++ G  HT  + S+G ++ +GD
Sbjct: 192 CWGD---NWSGQLGDGTTTDRSTPVAVSGLGSG--VTAIAAGGSHTCALMSSGGVWCWGD 246

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
              G LG G     STP  V  L    T  AA G  HT A              SSG + 
Sbjct: 247 NWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGGF-HTCA------------RTSSGGVM 293

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            WG    G+LG G   AR  P  V+ L       ++ G S T ALT++G V+  G   +G
Sbjct: 294 CWGANWSGQLGDGTTTARSTPVAVSGLAS-GVTAIAAGDSHTCALTSSGGVWCWGYNFFG 352

Query: 487 QLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           QLGD     +  P  V G    + V  IA GD+H   L S   V  WG+  +G+LG G T
Sbjct: 353 QLGDGTTTDRSTPVAVSGL--GSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTT 410

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             R+ P  V  L    V +I  G   T A
Sbjct: 411 TTRSTPVAVSGLV-SGVTAIAAGDDHTCA 438



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/353 (33%), Positives = 163/353 (46%), Gaps = 24/353 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P AV S +   V  IA G  H   +T  G V+ WG    G+LG G  +D S P  +  L 
Sbjct: 314 PVAV-SGLASGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGLG 372

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           +  V  +A G+ HTCA+  SG +  WG      G LG G   +   P  ++G + G  V+
Sbjct: 373 S-GVTAIAAGDFHTCALMSSGGVRCWG--RNKDGQLGDGTTTTRSTPVAVSGLVSG--VT 427

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
           +++ G  HT   TS+G +  +GD   G LG G     STP  V  L    T  AA G  H
Sbjct: 428 AIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGS-H 486

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           T A++            SSG ++ WG    G+LG G    R  P  V+ L       ++ 
Sbjct: 487 TCALM------------SSGGVWCWGRNSSGQLGDGTTTDRGTPVAVSGL-PSEVTAIAS 533

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAV 522
           G   T ALT++G V   G+   GQLGD     +  P  V G    + V  IA GD H   
Sbjct: 534 GGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGL--PSGVMAIAAGDLHTCA 591

Query: 523 LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           LTS   V+ WG  ++G+LG G T  R+ P  V  L    V +I  G+  T A+
Sbjct: 592 LTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGLP-SGVTAIAAGSFHTCAL 643



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 119/343 (34%), Positives = 155/343 (45%), Gaps = 25/343 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V  IA GG H   +T  G V  WG    G+LG G  +D S P  +  L +  V  +A G 
Sbjct: 69  VTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTS-GVTAIAAGY 127

Query: 295 HHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HTCA+  SG +  WG    N+ G LG G       P  ++G   G  V++++ G  HT 
Sbjct: 128 AHTCALMSSGGVMCWGD---NWSGQLGDGTTTDRSTPVAVSGLASG--VTAIAAGDDHTC 182

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
             TS+G +  +GD   G LG G     STP  V  L    T  AA G  HT A++     
Sbjct: 183 ARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGS-HTCALM----- 236

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                  SSG ++ WGD   G+LG G    R  P  V+ L       ++ G   T A T+
Sbjct: 237 -------SSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLAS-GVTAIAAGGFHTCARTS 288

Query: 474 TGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
           +G V   G+   GQLGD     +  P  V G    + V  IA GD H   LTS   V+ W
Sbjct: 289 SGGVMCWGANWSGQLGDGTTTARSTPVAVSGL--ASGVTAIAAGDSHTCALTSSGGVWCW 346

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G    G+LG G T DR+ P  V  L    V +I  G   T A+
Sbjct: 347 GYNFFGQLGDGTTTDRSTPVAVSGLG-SGVTAIAAGDFHTCAL 388



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 158/354 (44%), Gaps = 28/354 (7%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P AV S +V  V  IA G  H    T  G V  WG+   G+LG G  +D S P  +  L 
Sbjct: 416 PVAV-SGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLG 474

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEGIHV 342
           +  V  +A G  HTCA+  SG ++ WG    + G LG G       P  ++G P E   V
Sbjct: 475 S-GVTAIAAGGSHTCALMSSGGVWCWG--RNSSGQLGDGTTTDRGTPVAVSGLPSE---V 528

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL-KGLRTVRAACGV 401
           ++++ G  HT  +TS+G +  +G    G LG G   + STP  V  L  G+  + A  G 
Sbjct: 529 TAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLPSGVMAIAA--GD 586

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HT A+             SSG ++ WG    G+LG G   AR  P  V+ L       +
Sbjct: 587 LHTCALT------------SSGGVWCWGANSSGQLGDGTTTARSTPVAVSGL-PSGVTAI 633

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHV 520
           + G   T ALT++G V+  G+   GQLGD    +   P  V G    + V  IA G +H 
Sbjct: 634 AAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGL--PSGVTAIAAGRFHT 691

Query: 521 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              T    V+ W     G+LG G   D + P  V  L    V +I  G   T A
Sbjct: 692 CARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGLV-SGVTAIAAGVVHTCA 744



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 153/344 (44%), Gaps = 25/344 (7%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   D   P AV S +   V  IA G  H   +   G V  WG    G+LG G  +  S 
Sbjct: 357 GTTTDRSTPVAV-SGLGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRST 415

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLN 334
           P  +  L +  V  +A G+ HTCA T SG +  WG    N+ G LG G       P  ++
Sbjct: 416 PVAVSGLVS-GVTAIAAGDDHTCARTSSGGVMCWGD---NWSGQLGDGTTTDRSTPVAVS 471

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
           G   G  V++++ G  HT  + S+G ++ +G  + G LG G      TP  V  L    T
Sbjct: 472 GLGSG--VTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPVAVSGLPSEVT 529

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
             A+ GV HT A+             SSG +  WG    G+LG G   AR  P  V+ L 
Sbjct: 530 AIASGGV-HTCALT------------SSGGVMCWGANWSGQLGDGTTTARSTPVAVSGL- 575

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEI 513
                 ++ G   T ALT++G V+  G+   GQLGD     +  P  V G    + V  I
Sbjct: 576 PSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGL--PSGVTAI 633

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
           A G +H   LTS   V+ WG   +G+LG G   D + P  V  L
Sbjct: 634 AAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGL 677



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 149/330 (45%), Gaps = 25/330 (7%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   D   P AV S +   V  IA GG H   +   G V+ WG    G+LG G  +D   
Sbjct: 459 GTTTDRSTPVAV-SGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGT 517

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLN 334
           P  +  L +  V  +A G  HTCA+T SG +  WG    N+ G LG G   +   P  ++
Sbjct: 518 PVAVSGLPS-EVTAIASGGVHTCALTSSGGVMCWG---ANWSGQLGDGTTTARSTPVAVS 573

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
           G   G+   +++ G  HT  +TS+G ++ +G  + G LG G   + STP  V  L    T
Sbjct: 574 GLPSGVM--AIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGLPSGVT 631

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
             AA G +HT A+             SSG ++ WG    G+LG G       P  V+ L 
Sbjct: 632 AIAA-GSFHTCALT------------SSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGL- 677

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEI 513
                 ++ G   T A T +G V+   S  YGQLGD    +   P  V G ++   V  I
Sbjct: 678 PSGVTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGLVSG--VTAI 735

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           A G  H    TS   V  WG  ++G+LG G
Sbjct: 736 AAGVVHTCARTSSGGVMCWGANSSGQLGDG 765


>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
          Length = 409

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 135/275 (49%), Gaps = 30/275 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A GG H+A VT  G++++WG+   GRLGH    D   PKL++AL+   V  +ACG     
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60

Query: 299 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            + L+ D   W   + ++G LG G      +P K++  L G+ V  V CG   +  +T +
Sbjct: 61  TLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKS 119

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
           G ++T+G G +  LGHG    V  PR+V  L+G + +  A G  H     E         
Sbjct: 120 GAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE--------- 170

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
               G+++TWGD D G+LG G   A   P  VAAL      +V+CG + T+A +T+    
Sbjct: 171 ---DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS---- 223

Query: 479 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
                       P + GKLP +V   +  N ++EI
Sbjct: 224 -----------KPASAGKLPAQV--PMEYNHLQEI 245



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 108/231 (46%), Gaps = 17/231 (7%)

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVA 470
           G+ S+   ++G L+TWG G  GRLGH D E +L P  V AL       ++CG   + T+ 
Sbjct: 4   GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 63

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           LT    V++ G   YG+LG   ++G K+P +++  LT   V ++ CG      LT    V
Sbjct: 64  LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAV 122

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC-----LHKWVSGV 584
           YTWGKG   RLGHG  D    P  V+ L+ K+V +I  G S     C     ++ W    
Sbjct: 123 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG-SLHCVCCTEDGEVYTWGDND 181

Query: 585 DQSMCSGC-------RIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAP 628
           +  +  G        R+    + K+ N   CG  +    S+ K   A   P
Sbjct: 182 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 232



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 8/144 (5%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           VP  ++S   L V  + CG + +  +TK G V++WG+    RLGHG D  V  P+ +  L
Sbjct: 91  VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 150

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +   V  +A G  H    T  G++YTWG  + + G LG G   ++  P +L   L+G  V
Sbjct: 151 QGKKVIAIATGSLHCVCCTEDGEVYTWG--DNDEGQLGDGTTNAIQRP-RLVAALQGKKV 207

Query: 343 SSVSCG-----PWHTAVVTSAGQL 361
           + V+CG      W T+   SAG+L
Sbjct: 208 NRVACGSAHTLAWSTSKPASAGKL 231



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 10/95 (10%)

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           A G  H A +T+  ++YTWGKG  GRLGH D++D+  P LVEAL+  +V  I CG+    
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60

Query: 574 AICLHK------WVSG----VDQSMCSGCRIPFNF 598
            +CL        W  G    + +    GC++P   
Sbjct: 61  TLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 95



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC--GDYHVA 521
           G + +  +T  G +YT G   YG+LG   +  +L  ++   L  + V +IAC  GD    
Sbjct: 3   GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 62

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            LT    V++WG G  G+LG G +D    P  +++L    V  + CG+ F+ A+
Sbjct: 63  CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 116


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 145/286 (50%), Gaps = 23/286 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V ++ CG +H   +   G V++ G    G+LGH  +     P+ + AL    +  V+CGE
Sbjct: 36  VCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGH--EKSRKKPEHVVALDAQIIVAVSCGE 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT A+   G +++WG GSN   GL  +  E  + +P+ +   L  + ++ V+CG WH+ 
Sbjct: 94  SHTLALNDKGQVFSWGLGSNGQLGL--NNFEECVRVPRNIKC-LSDVQIAQVACGYWHSH 150

Query: 354 VVTSAGQLFTFGDGTFGVLG---HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            ++  GQ+F++G   FG LG   HG   S+STP+ + SL+G+   + + G  H+ A+   
Sbjct: 151 ALSKGGQVFSWGQNQFGQLGLGMHGS--SISTPQIIQSLQGIPFAQLSAGGAHSFAIT-- 206

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                      SG +F WG    G+LG  D + R  P  + +L       VSCG   T A
Sbjct: 207 ----------LSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAA 256

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
           LT    V+T G+  YGQLG    N ++  R   +L  N V +I+CG
Sbjct: 257 LTKLRGVFTFGAGGYGQLGHNCTNHEINPRKVFELMGNVVTQISCG 302



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 151/322 (46%), Gaps = 23/322 (7%)

Query: 254 VFSWGEELGGRLGHG-VDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +  WG    G+LG G +D + V  P+  +      V  V CG  HT  +   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCG- 59

Query: 312 SNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
             CN  G LGH  E S   P+ +   L+   + +VSCG  HT  +   GQ+F++G G+ G
Sbjct: 60  --CNDLGQLGH--EKSRKKPEHVVA-LDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNG 114

Query: 371 VLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG  +    V  PR +  L  ++  + ACG WH+ A+               G++F+WG
Sbjct: 115 QLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHAL------------SKGGQVFSWG 162

Query: 430 DGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
               G+LG G   + +  P  + +L    F Q+S G + + A+T +G V+  G   +GQL
Sbjct: 163 QNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQL 222

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
           G      +    +   L    V  ++CG+ H A LT    V+T+G G  G+LGH  T+  
Sbjct: 223 GLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHE 282

Query: 549 NFPSLVEALKDKQVKSIVCGTS 570
             P  V  L    V  I CG++
Sbjct: 283 INPRKVFELMGNVVTQISCGST 304



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 21/274 (7%)

Query: 306 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           M  WG  N ++G LG G  +E  +  P+K      G  V  V CG  HT  +   G ++T
Sbjct: 1   MLCWG--NASYGQLGLGGIDEEIVVEPRKCEF-FHGKRVCDVGCGLKHTVFLLDDGTVYT 57

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G    G LGH    S   P  V +L     V  +CG  HT A+ +             G
Sbjct: 58  CGCNDLGQLGHEK--SRKKPEHVVALDAQIIVAVSCGESHTLALND------------KG 103

Query: 424 KLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           ++F+WG G  G+LG  + +E   VP  +  L +    QV+CG+  + AL+  G V++ G 
Sbjct: 104 QVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQ 163

Query: 483 PVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
             +GQLG       + T ++   L      +++ G  H   +T    V+ WGK   G+LG
Sbjct: 164 NQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLG 223

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             DT DR FP+L+++L+ ++V  + CG   TAA+
Sbjct: 224 LNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAAL 257



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 124/256 (48%), Gaps = 25/256 (9%)

Query: 153 GRTGHLKGLSGDTFRVSL-SSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHR 210
           G+ GH K        V+L +  + + S G  H    +  G VF WG              
Sbjct: 64  GQLGHEKSRKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWG-------------- 109

Query: 211 SGSYAGVKMDSF-----VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 265
            GS   + +++F     VP+ ++    + +  +ACG  H+  ++K G+VFSWG+   G+L
Sbjct: 110 LGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQL 169

Query: 266 GHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 324
           G G+  S +S P++I +L+ I    ++ G  H+ A+TLSG ++ WG +   FG LG  + 
Sbjct: 170 GLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKN--KFGQLGLNDT 227

Query: 325 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 384
              W P  L   L    V  VSCG  HTA +T    +FTFG G +G LGH        PR
Sbjct: 228 KDRWFPALLKS-LRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPR 286

Query: 385 EVDSLKGLRTVRAACG 400
           +V  L G    + +CG
Sbjct: 287 KVFELMGNVVTQISCG 302


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 163/347 (46%), Gaps = 31/347 (8%)

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           G+LG G   +   A  ++D F P A        V +++    HAA V + GEVF+ G+  
Sbjct: 140 GVLGQGSETTQCVAFTRID-FPPLA-------RVVHVSASFNHAAFVMQSGEVFTCGDNS 191

Query: 262 GGRLGH-GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 320
               GH      +  P+L+++LK I  + VA G + T  +T  G +YT G +    G LG
Sbjct: 192 SSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNT--HGQLG 249

Query: 321 HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV 380
           HG+      PK +        V  ++ GP +   VT  G +++FG G    LGHG++   
Sbjct: 250 HGDTQDRPTPKMIEVLSS---VVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDE 306

Query: 381 STPREVDSL--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH 438
             PR +     KG+  VR + G  H  A+             S+G ++TWG G  G LGH
Sbjct: 307 LQPRAIQKFRRKGIHIVRVSAGDEHAVALD------------SNGYVYTWGKGYCGALGH 354

Query: 439 GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGK 496
           GD+  +  P  + +L      QV      T  L  +G VY  GS  +G LG  D + + K
Sbjct: 355 GDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDK 414

Query: 497 -LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            L  R+   L  + V +I+ G YH  V+TSR +++ +G     +LGH
Sbjct: 415 VLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGH 461



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 138/297 (46%), Gaps = 21/297 (7%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P+ VES   +  + +A G      +T++G V++ G    G+LGHG   D   PK+I+ 
Sbjct: 205 FRPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEV 264

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEGI 340
           L +  V  +A G  +  +VT +G +Y++G S  NF  LGHG +     P+ +     +GI
Sbjct: 265 LSS--VVQIAAGPSYILSVTENGTVYSFG-SGANF-CLGHGEQHDELQPRAIQKFRRKGI 320

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
           H+  VS G  H   + S G ++T+G G  G LGHGD I  +TP  + SLK    V+    
Sbjct: 321 HIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCAR 380

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR---LVPTCVAALVEPN 457
              T  +V+            SG ++ +G    G LG  D+      L P  +  L   +
Sbjct: 381 KRKTFVLVD------------SGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHH 428

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEI 513
             Q+S G   TV +T+ G ++  G     QLG       L PT +  K     VE I
Sbjct: 429 VSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTEIFIKDVSEDVESI 485



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 136/280 (48%), Gaps = 22/280 (7%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP-KKLNGPLEGIHVSSVSCG 348
           +  G++HT  ++ S  +Y+ G   C  G+LG G+E +  +   +++ P     V  VS  
Sbjct: 116 ITTGKYHTLLISNS-SVYSCGSGLC--GVLGQGSETTQCVAFTRIDFPPLA-RVVHVSAS 171

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAV 407
             H A V  +G++FT GD +    GH D    +  PR V+SLKG+   + A G+  T  +
Sbjct: 172 FNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFL 231

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
                          G ++T G    G+LGHGD + R  P  +  L   +  Q++ G S 
Sbjct: 232 TR------------KGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL--SSVVQIAAGPSY 277

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN--FVEEIACGDYHVAVLTS 525
            +++T  G VY+ GS     LG  + + +L  R   K  +    +  ++ GD H   L S
Sbjct: 278 ILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDS 337

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
              VYTWGKG  G LGHGD  ++  P L+ +LK++ V  +
Sbjct: 338 NGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQV 377



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 143/343 (41%), Gaps = 28/343 (8%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKLIDALKNINVELVACGEHHTCA 299
           G++  L+     V+S G  L G LG G ++   V+  + ID      V  V+   +H   
Sbjct: 119 GKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTR-IDFPPLARVVHVSASFNHAAF 177

Query: 300 VTLSGDMYTWG--GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           V  SG+++T G   S+C     GH +        +L   L+GI    V+ G   T  +T 
Sbjct: 178 VMQSGEVFTCGDNSSSC----CGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTR 233

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G ++T G  T G LGHGD     TP+ ++ L  +  V+ A G  +  +V E        
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSV--VQIAAGPSYILSVTE-------- 283

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP--NFCQVSCGHSLTVALTTTG 475
               +G ++++G G    LGHG++   L P  +        +  +VS G    VAL + G
Sbjct: 284 ----NGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNG 339

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +VYT G    G LG      K    +   L    V ++        VL     VY +G  
Sbjct: 340 YVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSM 399

Query: 536 ANGRLGHGD---TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G LG  D   +D    P +++ L+   V  I  G   T  I
Sbjct: 400 GFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVI 442


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 153/318 (48%), Gaps = 24/318 (7%)

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
           AL   N+  V+CG+ HT A+   G +Y WG  ++   GL   G E  + +P+ +   L  
Sbjct: 29  ALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGL--PGTEECIRVPRNIKS-LSD 85

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST-PREVDSLKGLRTVRAA 398
           I +  VSCG +H+  ++   ++F++G   +G LG G      T P+ + SL G+  ++ A
Sbjct: 86  IQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIA 145

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
            G            G+ S     SG +F WG    G+LG  D+  R VP  + +L     
Sbjct: 146 AG------------GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI 193

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
             + CG   T ALT  G V+T G+  YGQLG    + ++  R   +L  + V ++ACG  
Sbjct: 194 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ 253

Query: 519 HV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA---LKDKQVKSIVCGTSFTAA 574
           H  A + S   +Y++G G NG+LG G T +R  P  V+       +Q  S + G  +   
Sbjct: 254 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSEQDPSNIDGEQYY-- 311

Query: 575 ICLHKWVSGVDQSMCSGC 592
            C+ +  SG DQS    C
Sbjct: 312 -CVKRIFSGGDQSFSHYC 328



 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 140/282 (49%), Gaps = 20/282 (7%)

Query: 228 ESAVVLDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLIDALK 283
           E  V LD QNI   +CG  H   +  +G+V++WG +  G+LG  G +  +  P+ I +L 
Sbjct: 25  EQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLS 84

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           +I +  V+CG +H+ A++   ++++WG +   +G LG G E       +L   L GI   
Sbjct: 85  DIQIVQVSCGYYHSLALSKGSEVFSWGQN--KYGQLGLGFEFKKQTSPQLIKSLLGIPFM 142

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            ++ G  H+ V+T +G +F +G   FG LG  D      P  + SL+  + V   CG  H
Sbjct: 143 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 202

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           TAA+ +             G +FT+G G  G+LGH      + P  V  L+     QV+C
Sbjct: 203 TAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 250

Query: 464 GHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 503
           G   T A   ++G +Y+ G    GQLG    +N K P  V+G
Sbjct: 251 GRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 292



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 24/262 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG  T DG LG      G+   ++    VP+ ++S   + +  ++CG  H+  ++
Sbjct: 52  GQVYAWGLDT-DGQLG----LPGTEECIR----VPRNIKSLSDIQIVQVSCGYYHSLALS 102

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  EVFSWG+   G+LG G +    + P+LI +L  I    +A G  H+  +TLSG ++ 
Sbjct: 103 KGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 162

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +   FG LG  +E   ++P  L   L    +  + CG  HTA +T  G +FTFG G 
Sbjct: 163 WGRNK--FGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 219

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LGH        PR+V  L G    + ACG  HT+A V            SSG+++++
Sbjct: 220 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 268

Query: 429 GDGDRGRLGHGDKEARLVPTCV 450
           G G  G+LG G    R  P  V
Sbjct: 269 GLGGNGQLGTGSTSNRKSPFTV 290



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 16/195 (8%)

Query: 384 REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH-GDKE 442
            +V +L     V  +CG  HT A+ +             G+++ WG    G+LG  G +E
Sbjct: 25  EQVVALDAQNIVAVSCGDAHTLALND------------KGQVYAWGLDTDGQLGLPGTEE 72

Query: 443 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL--PTR 500
              VP  + +L +    QVSCG+  ++AL+    V++ G   YGQLG      K   P  
Sbjct: 73  CIRVPRNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQL 132

Query: 501 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDK 560
           ++  L   F++ IA G  H  VLT    ++ WG+   G+LG  D +DR  P+L+++L+ +
Sbjct: 133 IKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 191

Query: 561 QVKSIVCGTSFTAAI 575
           ++  I CG   TAA+
Sbjct: 192 KIVYICCGEDHTAAL 206



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 1/90 (1%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNFPSLVEALKDKQVKSIVCGTSF 571
           ++CGD H   L  + +VY WG   +G+LG   T++    P  +++L D Q+  + CG   
Sbjct: 38  VSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGYYH 97

Query: 572 TAAICLHKWVSGVDQSMCSGCRIPFNFKRK 601
           + A+     V    Q+      + F FK++
Sbjct: 98  SLALSKGSEVFSWGQNKYGQLGLGFEFKKQ 127


>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
 gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
          Length = 1914

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 147/316 (46%), Gaps = 39/316 (12%)

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPL 337
           I+    I +  VA G  H   V +   +YTWG GS    G LGHG+ +    P+ +   L
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSK---GQLGHGDLLGRSKPEMVEA-L 690

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           +G  +    CG   +  V+  G + T GDG+ G LGHGD +S S PR ++ L  +     
Sbjct: 691 KGKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAI 750

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           +CG  H  AV             S G++F WG G  G LG GD+E    P  V  + EP 
Sbjct: 751 SCGPHHVVAV------------GSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQ-ISEPV 797

Query: 458 FC-QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-----------------KLPT 499
           F  +V CG   T+ LT  G V   G+    +LG     G                 K+PT
Sbjct: 798 FIREVKCGVDGTMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPT 857

Query: 500 RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE--AL 557
            V   LT +   ++A G +H +VL    +VYT+G+   G+LG G T  R+ P  V+  ++
Sbjct: 858 VVRA-LTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSI 916

Query: 558 KDKQVKSIVCGTSFTA 573
            DK V  + CG  FTA
Sbjct: 917 SDKTVTMLACGDMFTA 932



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 151/327 (46%), Gaps = 36/327 (11%)

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
           +E    + ++ +A G  H  +V  +  V++WGE   G+LGHG     S P++++ALK  +
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKGKS 694

Query: 287 VELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
           +    CG+  +  V+ +G + T G GSN   G LGHG+ MS   P+ +  PL  + V ++
Sbjct: 695 IVRACCGDGFSVFVSDNGIVMTCGDGSN---GCLGHGDWMSASRPRLIE-PLLSVDVRAI 750

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 405
           SCGP H   V S G++F +G G  G LG GD     +P+EV   + +      CGV  T 
Sbjct: 751 SCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPVFIREVKCGVDGTM 810

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE----------------ARLVPTC 449
            + ++            G +   G+ +  +LG   ++                 R VPT 
Sbjct: 811 FLTDM------------GSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTV 858

Query: 450 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEG-KLTK 507
           V AL       ++ G   T  L   G VYT G  + GQLG      +  P  V+   ++ 
Sbjct: 859 VRALTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISD 918

Query: 508 NFVEEIACGDYHVAV-LTSRTEVYTWG 533
             V  +ACGD   AV + S   ++ WG
Sbjct: 919 KTVTMLACGDMFTAVGINSENALFFWG 945



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 126/297 (42%), Gaps = 47/297 (15%)

Query: 192 VFIWGECTGDGILGGG--IHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           V+ WGE +  G LG G  + RS            P+ VE+     +    CG   +  V+
Sbjct: 662 VYTWGEGS-KGQLGHGDLLGRSK-----------PEMVEALKGKSIVRACCGDGFSVFVS 709

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G V + G+   G LGHG     S P+LI+ L +++V  ++CG HH  AV   G+++ W
Sbjct: 710 DNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAISCGPHHVVAVGSDGEVFAW 769

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G      G LG G+E   + P+++    E + +  V CG   T  +T  G +   G+   
Sbjct: 770 GRG--KHGCLGLGDEEDHFSPQEVQIS-EPVFIREVKCGVDGTMFLTDMGSVLACGNNEN 826

Query: 370 GVLGHGDR-------------ISV---STPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
             LG   R             + V     P  V +L   R +  A G  HT+ +VE    
Sbjct: 827 NKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMAVGPHHTSVLVE---- 882

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA--ALVEPNFCQVSCGHSLT 468
                    GK++T+G    G+LG G  + R  P  V   ++ +     ++CG   T
Sbjct: 883 --------PGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACGDMFT 931



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 7/80 (8%)

Query: 496 KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
           +LP +++       + ++A G  H+ V+     VYTWG+G+ G+LGHGD   R+ P +VE
Sbjct: 636 ELPAKIK-------IRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVE 688

Query: 556 ALKDKQVKSIVCGTSFTAAI 575
           ALK K +    CG  F+  +
Sbjct: 689 ALKGKSIVRACCGDGFSVFV 708



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 18/166 (10%)

Query: 445 LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEG 503
           L P  + A ++     V   H + VA+     VYT G    GQLG     G+  P  VE 
Sbjct: 632 LTPIELPAKIKIRQVAVGLEHMVVVAMERA--VYTWGEGSKGQLGHGDLLGRSKPEMVEA 689

Query: 504 KLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
              K+ V    CGD     ++    V T G G+NG LGHGD    + P L+E L    V+
Sbjct: 690 LKGKSIVR-ACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVR 748

Query: 564 SIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCG 609
           +I CG     A+       G D  +       F + R +H C   G
Sbjct: 749 AISCGPHHVVAV-------GSDGEV-------FAWGRGKHGCLGLG 780


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 171/344 (49%), Gaps = 31/344 (9%)

Query: 247 LVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDALKN-INVELVACGEHHTCAVTLS 303
           L+ K   +   G    G+LG G   + +V    L+++ KN + +  +ACG HH+  +   
Sbjct: 11  LILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDD 70

Query: 304 GDMYTWGGSNCNFGLLGH-GNEMSLWLPKKLNGPLE------GIHVSSVSCGPWHTAVVT 356
           G +++ G  N +F  LGH G +    L + L+  ++      GIHV SV+CG  H   +T
Sbjct: 71  GSVFSCG--NNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALT 128

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVST----PREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           + G LF++G   +G LG  +R++V      PR +  +     V+ ACG  H+ A+     
Sbjct: 129 NDGHLFSWGSNVYGQLG-VERMNVVAKARYPR-IQEINLANIVQIACGSNHSLAL----- 181

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   + G L  WG  D G+LG G +E+ + PT V  L+    CQ++ G S ++ LT
Sbjct: 182 ------ESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLT 235

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYT 531
            +G V+  G  ++GQ+G  +    L   +   L    V  +ACG D+ VAV T+   ++T
Sbjct: 236 PSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAV-TATGGLFT 294

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +G G  G+LGHG+ +   FP  V  L    V  + CG   T AI
Sbjct: 295 FGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAI 338



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 171/358 (47%), Gaps = 41/358 (11%)

Query: 199 TGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 257
           T DG LG GGI      +   ++S       +   L ++ IACG  H+ ++   G VFS 
Sbjct: 24  TSDGQLGLGGIAEENVRSLTLVES-------TKNFLKIRQIACGRHHSVMLLDDGSVFSC 76

Query: 258 GEELGGRLGHGVDSDVSHPKLIDALK----------NINVELVACGEHHTCAVTLSGDMY 307
           G     +LGH  D     P L + L            I+V  VACG+ H  A+T  G ++
Sbjct: 77  GNNDFYQLGH--DGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLF 134

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS---VSCGPWHT-AVVTSAGQLFT 363
           +W GSN  +G LG    M++ + K     ++ I++++   ++CG  H+ A+ ++ G L  
Sbjct: 135 SW-GSNV-YGQLG-VERMNV-VAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHA 190

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           +G    G LG G R S   P  V+ L G+   + A G  H+  +              SG
Sbjct: 191 WGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLT------------PSG 238

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            +F WG    G++G  ++   L P+ V  L      +++CG   +VA+T TG ++T G+ 
Sbjct: 239 TVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAG 298

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            YGQLG    N +L  +   +L  + V ++ACG  H   +T   ++Y +G   +G+LG
Sbjct: 299 TYGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAIT-ENKLYAFGLNTSGQLG 355



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 25/289 (8%)

Query: 228 ESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG---HGVDSDVSHPKLIDALKN 284
           +S V + V ++ACG  H   +T  G +FSWG  + G+LG     V +   +P+ I  +  
Sbjct: 107 QSFVGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPR-IQEINL 165

Query: 285 INVELVACGEHHTCAV-TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
            N+  +ACG +H+ A+ +  G ++ WG +  + G LG G   S   P  +N  L GI + 
Sbjct: 166 ANIVQIACGSNHSLALESTDGVLHAWGLN--DHGQLGIGTRESFIGPTTVN-KLMGIPIC 222

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            ++ G  H+ V+T +G +F +G   FG +G  ++  +  P  V  L+  + +R ACG   
Sbjct: 223 QLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDF 282

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           + AV             ++G LFT+G G  G+LGHG++ + L P  V  L+      V+C
Sbjct: 283 SVAVT------------ATGGLFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVAC 330

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK----LPTRVEGKLTKN 508
           G   T+A+T    +Y  G    GQLG           LP  +E +  KN
Sbjct: 331 GRCHTLAITEN-KLYAFGLNTSGQLGLLNVKHTTSIPLPIPIEKQPRKN 378


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 168/342 (49%), Gaps = 30/342 (8%)

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           G  H+ L+   G V S G+   G+LG         P+ I AL+ ++V LV+CG+ H+ AV
Sbjct: 3   GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 62

Query: 301 TLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
              G ++ WG ++   G LG G  + + ++PKK+   L  I +  V+CG +H+  ++  G
Sbjct: 63  CHKGRVFAWGAASE--GQLGIGELKETTFIPKKIK-TLADIKIIQVACGHYHSLALSEDG 119

Query: 360 QLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
           Q+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+           
Sbjct: 120 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----------- 168

Query: 419 NCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
              SG  F WG  + G+L   G+     R  P  V AL   +   +SCG+  T  LT  G
Sbjct: 169 -SLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDG 227

Query: 476 HVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWG 533
            V+T G   YGQLG D  A  + P  VE    +  V +I CG YH +A + +  +V ++G
Sbjct: 228 KVFTFGDNSYGQLGHDSTAEKRGPQLVER--IEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285

Query: 534 KGANGRLG----HGDTDDRNFPSLVEA--LKDKQVKSIVCGT 569
           +G              +  +   L+ A  L+D QVK I  GT
Sbjct: 286 RGPGCTRSSPHPEALAESSDVSCLISANDLEDVQVKHIFAGT 327



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 144/278 (51%), Gaps = 28/278 (10%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKGL------SGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V+L S     S    H      G V
Sbjct: 18  SCGD----NSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHK-----GRV 68

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG  + +G LG G         +K  +F+PK +++   + +  +ACG  H+  +++ G
Sbjct: 69  FAWGAAS-EGQLGIG--------ELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDG 119

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++LSG  + WG 
Sbjct: 120 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGS 179

Query: 312 SNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           +N     L G+   +  + P  L G L+ + V  +SCG  HTAV+T  G++FTFGD ++G
Sbjct: 180 NNAGQLALSGNNAPVQRYKPV-LVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYG 238

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            LGH        P+ V+ ++GL + +  CG +HT A V
Sbjct: 239 QLGHDSTAEKRGPQLVERIEGLVS-QIDCGSYHTLAYV 275



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 23/236 (9%)

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  H+ ++ S G + + GD + G LG         P  + +L+ L     +CG  H+ AV
Sbjct: 3   GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 62

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHS 466
                       C  G++F WG    G+LG G+ KE   +P  +  L +    QV+CGH 
Sbjct: 63  ------------CHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHY 110

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAV 522
            ++AL+  G V++ G   +GQLG  K   + P++   +  ++     + ++A G  H   
Sbjct: 111 HSLALSEDGQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 167

Query: 523 LTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           L+     + WG    G+L   G+     R  P LV ALK   V  I CG   TA +
Sbjct: 168 LSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVL 223


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 178/391 (45%), Gaps = 48/391 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G ++ WG   G+G LG G +R          S  P  V+  +  D+  +  G  H+A + 
Sbjct: 271 GTLWTWGH-GGNGRLGLGHNRG---------SLSPAVVDYILDRDIVFVNAGDSHSACID 320

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           +QG +++WG    GRLGHG   ++  P+ ++    + V  VACG  HT A+T  G ++ W
Sbjct: 321 RQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAW 380

Query: 310 G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           G G    FG    G+   + +PK L+  +E   V +++ GP+H+A VT  G L  +G G 
Sbjct: 381 GAGLALGFGEGEDGSGGMVAVPKHLS-DIEAA-VLNIAAGPYHSAAVTVGGDLLVWGVGG 438

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
              LGHGD+ +   P+ V  L+    V          + ++ M+G S             
Sbjct: 439 SSRLGHGDQQNQPFPKYVADLRNRMYV----------SDLQSMLGVS------------- 475

Query: 429 GDGDRGRLGHGDKEARLVP-TCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
               R +  + D +   VP T            + CG S T+ALT  G V+  GS   GQ
Sbjct: 476 ----RLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQ 531

Query: 488 LG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           LG   D + +   P ++E   T   +  IACG  H   +    +V+ WG   NG+LG G 
Sbjct: 532 LGLGEDVEEDQYEPVKLECFSTP--IRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGV 589

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                 P+ V AL  +Q   + CG  ++A I
Sbjct: 590 VRPSFEPAAVTAL--RQAVDVFCGDDYSACI 618



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 160/376 (42%), Gaps = 63/376 (16%)

Query: 237 NIACGGRHAALVTKQ-----GEVFSWGEELGGRLGH---------GVDSDVS-------- 274
            ++CG  ++A++ K+     G+V+++G    GRLG+         G   D S        
Sbjct: 106 EVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGP 165

Query: 275 -----HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
                 P  +       +  ++CG  HT A++  G +Y WG  +  +G LG G+    + 
Sbjct: 166 SWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGS--YGNLGQGDTSDSYT 223

Query: 330 PKKLNGPLEG------------------IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           P ++    E                   + V+  S G  H+   TS G L+T+G G  G 
Sbjct: 224 PVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGR 283

Query: 372 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           LG G      +P  VD +     V    G  H+A +               G L+TWG G
Sbjct: 284 LGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDR------------QGVLYTWGSG 331

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV---YGQL 488
             GRLGHGD+    VP  V         QV+CG   T+ALT  G V+  G+ +   +G+ 
Sbjct: 332 GFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGE- 390

Query: 489 GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
           G+  + G +         +  V  IA G YH A +T   ++  WG G + RLGHGD  ++
Sbjct: 391 GEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQ 450

Query: 549 NFPSLVEALKDKQVKS 564
            FP  V  L+++   S
Sbjct: 451 PFPKYVADLRNRMYVS 466



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 183/483 (37%), Gaps = 106/483 (21%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           D  G ++ WG         GG  R G   G + +  VP+ VE    + V  +ACG  H  
Sbjct: 320 DRQGVLYTWGS--------GGFGRLGH--GDQGEIPVPRKVEGFGGVPVLQVACGTFHTL 369

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL--VACGEHHTCAVTLSG 304
            +T +G VF+WG  L    G G D       +   L +I   +  +A G +H+ AVT+ G
Sbjct: 370 ALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGG 429

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS--------------------- 343
           D+  WG    +   LGHG++ +   PK +      ++VS                     
Sbjct: 430 DLLVWGVGGSS--RLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVL 487

Query: 344 ----------------SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 387
                           S+ CG  HT  +T AG ++ +G    G LG G+ +       V 
Sbjct: 488 DVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV- 546

Query: 388 SLKGLRTV--RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
            L+   T   R ACG  H  AV +             G +F WG  D G+LG G      
Sbjct: 547 KLECFSTPIRRIACGSKHCLAVAQY------------GDVFAWGANDNGQLGLGVVRPSF 594

Query: 446 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-----NGKL--- 497
            P  V AL +     V CG   +  +T+ G   ++      + GD  A     +GKL   
Sbjct: 595 EPAAVTALRQA--VDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLG 652

Query: 498 ----------PTRVE----------GKLTKNFVEEIAC--------GDYHVAVLTSRTEV 529
                     P +V             L     + + C        G  H   +T++ E 
Sbjct: 653 EDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGEC 712

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK--WVSGVDQS 587
           Y WG G  GRLG G T +   P+  +  K  +++S+  G   + A+ +    W  G  + 
Sbjct: 713 YAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRRED 772

Query: 588 MCS 590
            CS
Sbjct: 773 TCS 775



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 136/340 (40%), Gaps = 65/340 (19%)

Query: 286 NVELVACGEHHTCAVTLSGD---MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +V+ VA G +HT  V L GD   ++ WG +  N  +LG G E+   +   L      +  
Sbjct: 47  SVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSN--VLGMGVEIRERVFPGLVPFFSKMGT 104

Query: 343 SSVSCGPWHTAVVTS-----AGQLFTFGDGTFGVLGH----------------------G 375
             VSCG  ++AV+        G+++TFG G  G LG+                      G
Sbjct: 105 FEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDG 164

Query: 376 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
                  P  V      +  R +CG  HT A+ +             G L+ WG G  G 
Sbjct: 165 PSWFTPKPSRVRFRDKCKIARISCGADHTLALSD------------EGALYAWGVGSYGN 212

Query: 436 LGHGDKEARLVPTCV----------------AALVEPNFCQVSC---GHSLTVALTTTGH 476
           LG GD      P  V                   V  +   V+C   G   ++A T+ G 
Sbjct: 213 LGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGT 272

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           ++T G    G+LG     G L P  V+  L ++ V  +  GD H A +  +  +YTWG G
Sbjct: 273 LWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVF-VNAGDSHSACIDRQGVLYTWGSG 331

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             GRLGHGD  +   P  VE      V  + CGT  T A+
Sbjct: 332 GFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLAL 371



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 166/458 (36%), Gaps = 126/458 (27%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG       LG G    GS   V     VPK + S +   V NIA G  H+A VT
Sbjct: 375 GTVFAWGAGLA---LGFGEGEDGSGGMVA----VPKHL-SDIEAAVLNIAAGPYHSAAVT 426

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN------------------------- 284
             G++  WG     RLGHG   +   PK +  L+N                         
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486

Query: 285 -------------INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK 331
                          ++ + CGE HT A+T +G ++ WG ++     LG   E   + P 
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV 546

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
           KL        +  ++CG  H   V   G +F +G    G LG G       P  V +L+ 
Sbjct: 547 KLE--CFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR- 603

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSS--GKLFTWGDGDRGRLGHGD--------- 440
            + V   CG  ++A +  +    S S    +  G L+ WG  + G+LG G+         
Sbjct: 604 -QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILT 662

Query: 441 --KEARLVPTCVAAL-------VEPNFC----QVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
             K    VP C  +L        +  FC     +  G S ++A+T  G  Y  G+  YG+
Sbjct: 663 PQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGR 722

Query: 488 LG-DPKANGKLPTR-----------------------VEGKL-----------TKNF--- 509
           LG    AN   PTR                       ++G L           T N+   
Sbjct: 723 LGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSP 782

Query: 510 --------------VEEIACGDYHVAVLTSRTEVYTWG 533
                         V+ I+  + H   +T   EV+ WG
Sbjct: 783 RIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWG 820



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 149/377 (39%), Gaps = 91/377 (24%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V++WG    DG LG G         V+ D + P  +E      ++ IACG +H   V 
Sbjct: 519 GAVWVWGS-NDDGQLGLG-------EDVEEDQYEPVKLE-CFSTPIRRIACGSKHCLAVA 569

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG----- 304
           + G+VF+WG    G+LG GV      P  + AL+   V++    ++  C  +L G     
Sbjct: 570 QYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQA-VDVFCGDDYSACITSLGGAQSVS 628

Query: 305 --------DMYTWGGSNCNFGLLGHGNEM---SLWLPKKLN----------GPLEGIHVS 343
                   D++ WG +    G LG G ++   S+  P+K+             LE     
Sbjct: 629 GETGTEFGDLWAWGAAES--GKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYK 686

Query: 344 SVSC--------GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            V C        G  H+  +T+ G+ + +G G +G LG G   +  TP   D  KG+R  
Sbjct: 687 RVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLR 746

Query: 396 RAACGVWHTAAVV---EVMVGSSSSSNCSS------------------------------ 422
             A G  H+ A+    ++         CS+                              
Sbjct: 747 SVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERH 806

Query: 423 -------GKLFTWGDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQ-VSCGHSLTVALT 472
                  G++F WGD    + G G ++A  +  P  VA L  P+ CQ V+ G   +  + 
Sbjct: 807 SLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGL--PSACQWVATGPQGSFFIL 864

Query: 473 TTGHVYTMGSPVYGQLG 489
            +G V+  G    G+LG
Sbjct: 865 ASGEVFAAGVIKSGRLG 881



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 119/293 (40%), Gaps = 32/293 (10%)

Query: 161 LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGEC------TGDGILGGGIHR---- 210
             GD +   ++S     +Q    + G   GD++ WG         G+ +  G I      
Sbjct: 609 FCGDDYSACITSL--GGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKV 666

Query: 211 --SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG 268
             S       +DS   +A +    +    +  G  H+  +T QGE ++WG    GRLG G
Sbjct: 667 VFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIG 726

Query: 269 VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG--GSNCNFGLLGHGNEMS 326
             ++   P   D  K + +  VA G  H+ A+++ GD++ WG     C+       N MS
Sbjct: 727 TTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCS-----TTNYMS 781

Query: 327 LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
             +  +L G      V S+S    H+  VT AG++F +GD      G G R        +
Sbjct: 782 PRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKR----QAERL 837

Query: 387 DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
           D  + +  + +AC    T       +        +SG++F  G    GRLG G
Sbjct: 838 DRPERVAGLPSACQWVATGPQGSFFI-------LASGEVFAAGVIKSGRLGTG 883


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 163/330 (49%), Gaps = 30/330 (9%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           DS  P+ +     L++   A G RH+ L+     V+S G+   G+LG   + +   P+ I
Sbjct: 8   DSRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPI 67

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
            AL  ++++LV+CG+ H+ AV   G ++ WG GS    G +G   E++L +P ++   L 
Sbjct: 68  QALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLG-IGEFKEINL-MPMRIK-TLG 124

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRA 397
           GI +  VSCG +H+  ++  GQ+F++G  + G LG G +  S ++P++V SL+G+   + 
Sbjct: 125 GIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQV 184

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALV 454
           A G            GS S +   +G  + WG    G+L    + + +    P  + AL 
Sbjct: 185 AAG------------GSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALK 232

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL-GDPKANGKLPTRVEGKLTKNFVEEI 513
                 +SCG+  T  LT  G V+T G    GQL  +P+   + P  VEG   K  V +I
Sbjct: 233 NLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEG--IKGQVSKI 290

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            CG YH       T  Y +  G    LGHG
Sbjct: 291 ECGSYH-------TIAYVYTTGQVVSLGHG 313



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 152/311 (48%), Gaps = 25/311 (8%)

Query: 271 SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP 330
           +D   P+ ++    + +   A GE H+  +  +  +Y+ G ++   G LG   E +   P
Sbjct: 7   ADSRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNS--LGQLGQKREQNTEQP 64

Query: 331 KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVDSL 389
           + +   L  + +  VSCG  H+  V   G++F +G G+ G LG G+   ++  P  + +L
Sbjct: 65  EPIQA-LGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTL 123

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG-DKEARLVPT 448
            G++ ++ +CG +H+ A+ E             G++F+WG   +G+LG G    ++  P 
Sbjct: 124 GGIKIIQVSCGHYHSLALSE------------DGQVFSWGKNSQGQLGLGMQSSSQASPQ 171

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL----PTRVEGK 504
            V +L      QV+ G S + AL+ TG  Y  GS   GQL     N  +    P  ++  
Sbjct: 172 KVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDA- 230

Query: 505 LTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
             KN  V  I+CG  H AVLT   +V+T+G  ++G+L +     R  P LVE +K  QV 
Sbjct: 231 -LKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEGIKG-QVS 288

Query: 564 SIVCGTSFTAA 574
            I CG+  T A
Sbjct: 289 KIECGSYHTIA 299



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 26/255 (10%)

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P++LNG  +G+ +   + G  H+ ++ S  ++++ GD + G LG     +   P  + +L
Sbjct: 12  PRRLNGR-DGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQAL 70

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPT 448
             L     +CG  H+ AV            C  G++F WG G  G+LG G+ KE  L+P 
Sbjct: 71  GTLDIDLVSCGKEHSIAV------------CHKGRVFAWGAGSEGQLGIGEFKEINLMPM 118

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-----DPKANGKLPTRVEG 503
            +  L      QVSCGH  ++AL+  G V++ G    GQLG       +A+ +  T +EG
Sbjct: 119 RIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEG 178

Query: 504 KLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDK 560
                 + ++A G  H   L+     Y WG  + G+L   G   T   + P  ++ALK+ 
Sbjct: 179 IP----LAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNL 234

Query: 561 QVKSIVCGTSFTAAI 575
            V  I CG   TA +
Sbjct: 235 GVIYISCGYEHTAVL 249


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 125/215 (58%), Gaps = 15/215 (6%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVAC 292
           ++  I CG  H+  ++K GE+F+WG+ L G+LG G + +  S P++++ L  + +  ++ 
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           GE H+ A+++SG++Y+WG ++C  G LG G+  +   P  +   L+   V  ++CG  HT
Sbjct: 213 GEAHSMALSMSGNVYSWGRNDC--GQLGLGHTYNKESPSCIEA-LDDQKVEFLACGGCHT 269

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           A++T +G +FTFGDG +G LGH    +   PR V  L G R  + ACG  HT A V    
Sbjct: 270 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVS--- 326

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                    +GK+F++G G  G+LG+G    +L+P
Sbjct: 327 --------DTGKVFSFGSGKEGQLGNGGTRNQLIP 353



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 31/279 (11%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK I   K + +  +  GE H   ++  G  + +  S      + H          +   
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS------IEHA---------RFQC 147

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLR 393
            L+  ++  ++CG +H+  ++  G+LF +G    G LG G RI  S STP  V++L G+ 
Sbjct: 148 ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTPEIVENLSGVP 206

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
            V+ + G  H+ A+              SG +++WG  D G+LG G    +  P+C+ AL
Sbjct: 207 LVQISAGEAHSMAL------------SMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEAL 254

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
            +     ++CG   T  LT +G V+T G   YGQLG      +L  R+   L  N V +I
Sbjct: 255 DDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQI 314

Query: 514 ACGDYHVAVLTSRT-EVYTWGKGANGRLGHGDTDDRNFP 551
           ACG  H     S T +V+++G G  G+LG+G T ++  P
Sbjct: 315 ACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 353



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 132/278 (47%), Gaps = 27/278 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           PK ++    + + ++  G  H  +++  G+ F +               + H +    L+
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQ 150

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
             N+  + CG++H+ A++  G+++ W G N + G LG G   +     ++   L G+ + 
Sbjct: 151 EKNIIQITCGDYHSLALSKGGELFAW-GQNLD-GQLGVGRIFASTSTPEIVENLSGVPLV 208

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            +S G  H+  ++ +G ++++G    G LG G   +  +P  +++L   +    ACG  H
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCH 268

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           TA + +            SG +FT+GDG  G+LGH   +  L P  V  LV     Q++C
Sbjct: 269 TALLTK------------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIAC 316

Query: 464 GHSLTVA-LTTTGHVYTMGSPVYGQLGDPKANGKLPTR 500
           G   T+A ++ TG V++ GS   GQLG+     +L  R
Sbjct: 317 GRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 354



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 15/197 (7%)

Query: 190 GDVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           G++F WG+   DG LG G I  S S          P+ VE+   + +  I+ G  H+  +
Sbjct: 171 GELFAWGQ-NLDGQLGVGRIFASTS---------TPEIVENLSGVPLVQISAGEAHSMAL 220

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           +  G V+SWG    G+LG G   +   P  I+AL +  VE +ACG  HT  +T SG ++T
Sbjct: 221 SMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFT 280

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDG 367
           +G  +  +G LGH +  +   P+ + G L G  V+ ++CG  HT A V+  G++F+FG G
Sbjct: 281 FG--DGKYGQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSG 337

Query: 368 TFGVLGHGDRISVSTPR 384
             G LG+G   +   PR
Sbjct: 338 KEGQLGNGGTRNQLIPR 354



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 27/237 (11%)

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           + + S+  G  H  V++S G+ F +            + S+   R    L+    ++  C
Sbjct: 112 MKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQEKNIIQITC 159

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNF 458
           G +H+ A+               G+LF WG    G+LG G   A    P  V  L     
Sbjct: 160 GDYHSLAL------------SKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 207

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            Q+S G + ++AL+ +G+VY+ G    GQLG     N + P+ +E  L    VE +ACG 
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA-LDDQKVEFLACGG 266

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            H A+LT    V+T+G G  G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 267 CHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLA 323



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 7/148 (4%)

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           DG      +  + AR    C+  L E N  Q++CG   ++AL+  G ++  G  + GQLG
Sbjct: 130 DGKPFEYKYSIEHARF--QCI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLG 185

Query: 490 DPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
             +  A+   P  VE  L+   + +I+ G+ H   L+    VY+WG+   G+LG G T +
Sbjct: 186 VGRIFASTSTPEIVEN-LSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYN 244

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +  PS +EAL D++V+ + CG   TA +
Sbjct: 245 KESPSCIEALDDQKVEFLACGGCHTALL 272



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 18/160 (11%)

Query: 178 SQGSGHDDGDSL-GDVFIWG--ECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           S G  H    S+ G+V+ WG  +C   G LG G H     +        P  +E+     
Sbjct: 211 SAGEAHSMALSMSGNVYSWGRNDC---GQLGLG-HTYNKES--------PSCIEALDDQK 258

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H AL+TK G VF++G+   G+LGH    +   P+L+  L    V  +ACG 
Sbjct: 259 VEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGR 318

Query: 295 HHTCA-VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            HT A V+ +G ++++G      G LG+G   +  +P+ +
Sbjct: 319 QHTLAYVSDTGKVFSFGSGKE--GQLGNGGTRNQLIPRPM 356


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 164/341 (48%), Gaps = 29/341 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V N++CG  H+A+VT  G+++++G    G+LGHG     + P ++  LK   V +VACG 
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGR 96

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           +HT A T SG +Y++G G +   G LGHG+     +PK + G L+      ++CG   +A
Sbjct: 97  NHTIAATESGHLYSFGCGGD---GQLGHGDAEDSHVPKIIEG-LDVQKYKHLACGSDFSA 152

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            +T  G+L+T+G    G  G G+   + T   +      +    +CG +H A V E    
Sbjct: 153 AITENGELYTWGSCGEGQNGLGEDTEIPTRLHLHG----KVRMVSCGYYHMAVVTE---- 204

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGHSLTVAL 471
                    G L+  G+ + G+LG  D E     + +  +  +E      +CG   T  +
Sbjct: 205 --------DGSLYMCGEKEGGKLGL-DHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVV 255

Query: 472 TTTGHVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           T  G VYT G    GQ  LG      + P R+     K     ++CG+   AV+T    +
Sbjct: 256 TKNGSVYTFGQGNQGQLGLGSSMMETEFPERIP-LFEKVKARTVSCGESFTAVITKHGNL 314

Query: 530 YTWGKGANGRLGHGDTDDRNF--PSLVEALKDKQVKSIVCG 568
           YT+G G +G+LG GD    N   P  V+   +  VK + CG
Sbjct: 315 YTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCG 355



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 152/306 (49%), Gaps = 29/306 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V+      V  +ACG  H    T+ G ++S+G    G+LGHG   D   PK+I+ L 
Sbjct: 78  PSVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLD 137

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
               + +ACG   + A+T +G++YTWG  +C  G  G G +    +P +L+  L G  V 
Sbjct: 138 VQKYKHLACGSDFSAAITENGELYTWG--SCGEGQNGLGEDTE--IPTRLH--LHG-KVR 190

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGV 401
            VSCG +H AVVT  G L+  G+   G LG  H    + S  +++ S++  + V AACG 
Sbjct: 191 MVSCGYYHMAVVTEDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIED-QVVVAACGA 249

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQ 460
             TA V +            +G ++T+G G++G+LG G        P  +    +     
Sbjct: 250 EFTAVVTK------------NGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKART 297

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF-VEEIACG 516
           VSCG S T  +T  G++YT G   +G+LG   +  +N   P +V  K   NF V+ + CG
Sbjct: 298 VSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKV--KRFNNFTVKMVTCG 355

Query: 517 DYHVAV 522
             H+ V
Sbjct: 356 GCHMLV 361



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 132/288 (45%), Gaps = 64/288 (22%)

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V ++SCG  H+AVVT+ G+L+TFG   +G LGHG+  S + P  V  LK  +    ACG 
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGR 96

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            HT A  E            SG L+++G G  G+LGHGD E   VP  +  L    +  +
Sbjct: 97  NHTIAATE------------SGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHL 144

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVE------------------- 502
           +CG   + A+T  G +YT GS   GQ G  + + ++PTR+                    
Sbjct: 145 ACGSDFSAAITENGELYTWGSCGEGQNGLGE-DTEIPTRLHLHGKVRMVSCGYYHMAVVT 203

Query: 503 -------------GKL---------------TKNFVEEI---ACGDYHVAVLTSRTEVYT 531
                        GKL                K+  +++   ACG    AV+T    VYT
Sbjct: 204 EDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYT 263

Query: 532 WGKGANGRLGHGDTD-DRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
           +G+G  G+LG G +  +  FP  +   +  + +++ CG SFTA I  H
Sbjct: 264 FGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKH 311



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 28/222 (12%)

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           V  +G +FTFG   F      D ++       D++     V  +CG  H+A V       
Sbjct: 8   VPESGAVFTFGKTRFA-----DNLANKFWIRDDAV-----VNLSCGDEHSAVVT------ 51

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                 ++GKL+T+G  D G+LGHG+ ++   P+ V  L       V+CG + T+A T +
Sbjct: 52  ------ANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATES 105

Query: 475 GHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           GH+Y+ G    GQLG   A +  +P  +EG   + + + +ACG    A +T   E+YTWG
Sbjct: 106 GHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKY-KHLACGSDFSAAITENGELYTWG 164

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               G+ G G  +D   P+ +      +V+ + CG    A +
Sbjct: 165 SCGEGQNGLG--EDTEIPTRLHL--HGKVRMVSCGYYHMAVV 202



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 4/126 (3%)

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
           +SCG   +  +T  G +YT G   +GQLG           V  KL    V  +ACG  H 
Sbjct: 40  LSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHT 99

Query: 521 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC---- 576
              T    +Y++G G +G+LGHGD +D + P ++E L  ++ K + CG+ F+AAI     
Sbjct: 100 IAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAITENGE 159

Query: 577 LHKWVS 582
           L+ W S
Sbjct: 160 LYTWGS 165


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 174/349 (49%), Gaps = 30/349 (8%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           +++   A G  H+ L+     V+S G+   G+LG   D     P+ I AL +++V+LV+C
Sbjct: 22  IELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSC 81

Query: 293 GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           G+ H+ AV   G ++ WG GS    G +G   E+S ++P K+   L GI +  VSCG +H
Sbjct: 82  GKEHSVAVCHKGKVFAWGAGSEGQLG-IGEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYH 138

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +  ++  G +F++G  + G LG G +  S + P++V SL+G+   + A G  H+ A+   
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL--S 196

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
           + G+S          F WG    G+L   G+  KE    P  + AL   +   +SCG+  
Sbjct: 197 LTGTS----------FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEH 246

Query: 468 TVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTS 525
           T  LT  G V+T G    GQL   P++  + P  +EG      V +I C  YH +A + +
Sbjct: 247 TAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG--IGGRVSQIECASYHTIAYVYT 304

Query: 526 RTEVYTWGKG----ANGRLGHGDTDDRNFPSLV--EALKDKQVKSIVCG 568
             +V + G+G    +N        ++ +   L+  E L D +VK I  G
Sbjct: 305 TGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAG 353



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 120/252 (47%), Gaps = 19/252 (7%)

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P++L     GI +   + G  H+ ++ S  ++++ GD ++G LG     S   P  + +L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPT 448
             L     +CG  H+ AV            C  GK+F WG G  G+LG G+ KE   +PT
Sbjct: 72  NDLHVDLVSCGKEHSVAV------------CHKGKVFAWGAGSEGQLGIGEFKEISFMPT 119

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLT 506
            + AL      QVSCGH  ++AL+  GHV++ G    GQLG  K   +  +P +V+  L 
Sbjct: 120 KIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LE 178

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVK 563
              + ++A G  H   L+     + WG   +G+L   G+   +    P  + ALK+  V 
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238

Query: 564 SIVCGTSFTAAI 575
            I CG   TA +
Sbjct: 239 YISCGYEHTAVL 250



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 22/264 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDAL 282
           P+ +++   L V  ++CG  H+  V  +G+VF+WG    G+LG G   ++S  P  I AL
Sbjct: 65  PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIH 341
             I +  V+CG +H+ A++  G +++WG ++   G LG G N  S  +P+K+   LEGI 
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSE--GQLGLGKNSRSQAIPQKVKS-LEGIP 181

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           ++ V+ G  H+  ++  G  F +G    G   + G+  +  +  P  + +LK L  +  +
Sbjct: 182 LAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYIS 241

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HTA + E             G++FT+G    G+L    +  +  P  +   +    
Sbjct: 242 CGYEHTAVLTE------------EGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG-IGGRV 288

Query: 459 CQVSCGHSLTVA-LTTTGHVYTMG 481
            Q+ C    T+A + TTG V ++G
Sbjct: 289 SQIECASYHTIAYVYTTGQVVSLG 312



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 13/221 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG    +G LG G          K  SF+P  +++   + +  ++CG  H+  ++
Sbjct: 93  GKVFAWG-AGSEGQLGIG--------EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALS 143

Query: 250 KQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           + G VFSWG    G+LG G +S   + P+ + +L+ I +  VA G  H+ A++L+G  + 
Sbjct: 144 EDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG 203

Query: 309 WGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG +      L G+  +  ++ P  + G L+ + V  +SCG  HTAV+T  GQ+FTFG  
Sbjct: 204 WGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFGGN 262

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           + G L    R     P+ ++ + G R  +  C  +HT A V
Sbjct: 263 SSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYV 302



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 204 LGGGIHRSGSYA----GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
            G G +RSG  A     VK   + P ++ +   L V  I+CG  H A++T++G+VF++G 
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 261

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 310
              G+L     S    P+LI+ +    V  + C  +HT A V  +G + + G
Sbjct: 262 NSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLG 312



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
           A  + P R++   +   + + A G++H  +L S   VY+ G  + G+LG         P 
Sbjct: 7   AGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPE 66

Query: 553 LVEALKDKQVKSIVCGTSFTAAICLHK 579
            ++AL D  V  + CG   + A+C HK
Sbjct: 67  PIQALNDLHVDLVSCGKEHSVAVC-HK 92


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 125/215 (58%), Gaps = 15/215 (6%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVAC 292
           ++  I CG  H+  ++K GE+F+WG+ L G+LG G + +  S P++++ L  + +  ++ 
Sbjct: 148 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 207

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           GE H+ A+++SG++Y+WG ++C  G LG G+  +   P  +   L+   V  ++CG  HT
Sbjct: 208 GEAHSMALSMSGNVYSWGRNDC--GQLGLGHTYNKESPSCIEA-LDDQKVEFLACGGCHT 264

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           A++T +G +FTFGDG +G LGH    +   PR V  L G R  + ACG  HT A V    
Sbjct: 265 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVS--- 321

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                    +GK+F++G G  G+LG+G    +L+P
Sbjct: 322 --------DTGKVFSFGSGKEGQLGNGGTRNQLIP 348



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 31/279 (11%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK I   K + +  +  GE H   ++  G  + +  S      + H          +   
Sbjct: 98  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS------IEHA---------RFQC 142

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLR 393
            L+  ++  ++CG +H+  ++  G+LF +G    G LG G RI  S STP  V++L G+ 
Sbjct: 143 ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTPEIVENLSGVP 201

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
            V+ + G  H+ A+              SG +++WG  D G+LG G    +  P+C+ AL
Sbjct: 202 LVQISAGEAHSMAL------------SMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEAL 249

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
            +     ++CG   T  LT +G V+T G   YGQLG      +L  R+   L  N V +I
Sbjct: 250 DDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQI 309

Query: 514 ACGDYHVAVLTSRT-EVYTWGKGANGRLGHGDTDDRNFP 551
           ACG  H     S T +V+++G G  G+LG+G T ++  P
Sbjct: 310 ACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 348



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 132/278 (47%), Gaps = 27/278 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           PK ++    + + ++  G  H  +++  G+ F +               + H +    L+
Sbjct: 98  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQ 145

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
             N+  + CG++H+ A++  G+++ W G N + G LG G   +     ++   L G+ + 
Sbjct: 146 EKNIIQITCGDYHSLALSKGGELFAW-GQNLD-GQLGVGRIFASTSTPEIVENLSGVPLV 203

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            +S G  H+  ++ +G ++++G    G LG G   +  +P  +++L   +    ACG  H
Sbjct: 204 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCH 263

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           TA + +            SG +FT+GDG  G+LGH   +  L P  V  LV     Q++C
Sbjct: 264 TALLTK------------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIAC 311

Query: 464 GHSLTVA-LTTTGHVYTMGSPVYGQLGDPKANGKLPTR 500
           G   T+A ++ TG V++ GS   GQLG+     +L  R
Sbjct: 312 GRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 349



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 15/197 (7%)

Query: 190 GDVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           G++F WG+   DG LG G I  S S          P+ VE+   + +  I+ G  H+  +
Sbjct: 166 GELFAWGQ-NLDGQLGVGRIFASTS---------TPEIVENLSGVPLVQISAGEAHSMAL 215

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           +  G V+SWG    G+LG G   +   P  I+AL +  VE +ACG  HT  +T SG ++T
Sbjct: 216 SMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFT 275

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDG 367
           +G  +  +G LGH +  +   P+ + G L G  V+ ++CG  HT A V+  G++F+FG G
Sbjct: 276 FG--DGKYGQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSG 332

Query: 368 TFGVLGHGDRISVSTPR 384
             G LG+G   +   PR
Sbjct: 333 KEGQLGNGGTRNQLIPR 349



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 27/237 (11%)

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           + + S+  G  H  V++S G+ F +            + S+   R    L+    ++  C
Sbjct: 107 MKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQEKNIIQITC 154

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNF 458
           G +H+ A+               G+LF WG    G+LG G   A    P  V  L     
Sbjct: 155 GDYHSLAL------------SKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 202

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            Q+S G + ++AL+ +G+VY+ G    GQLG     N + P+ +E  L    VE +ACG 
Sbjct: 203 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA-LDDQKVEFLACGG 261

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            H A+LT    V+T+G G  G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 262 CHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLA 318



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 7/148 (4%)

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           DG      +  + AR    C+  L E N  Q++CG   ++AL+  G ++  G  + GQLG
Sbjct: 125 DGKPFEYKYSIEHARF--QCI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLG 180

Query: 490 DPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
             +  A+   P  VE  L+   + +I+ G+ H   L+    VY+WG+   G+LG G T +
Sbjct: 181 VGRIFASTSTPEIVEN-LSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYN 239

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +  PS +EAL D++V+ + CG   TA +
Sbjct: 240 KESPSCIEALDDQKVEFLACGGCHTALL 267



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 18/160 (11%)

Query: 178 SQGSGHDDGDSL-GDVFIWG--ECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           S G  H    S+ G+V+ WG  +C   G LG G H     +        P  +E+     
Sbjct: 206 SAGEAHSMALSMSGNVYSWGRNDC---GQLGLG-HTYNKES--------PSCIEALDDQK 253

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H AL+TK G VF++G+   G+LGH    +   P+L+  L    V  +ACG 
Sbjct: 254 VEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGR 313

Query: 295 HHTCA-VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            HT A V+ +G ++++G      G LG+G   +  +P+ +
Sbjct: 314 QHTLAYVSDTGKVFSFGSGKE--GQLGNGGTRNQLIPRPM 351


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 163/348 (46%), Gaps = 33/348 (9%)

Query: 202 GILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 260
           G+LG G   +   A  ++DS  +P+ V  +   +         HAA V + GEVF+ G+ 
Sbjct: 140 GVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFN---------HAAFVMQSGEVFTCGDN 190

Query: 261 LGGRLGH-GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLL 319
                GH      +  P+L+++LK I  + VA G + T  +T  G +YT G +    G L
Sbjct: 191 SSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTCGTNT--HGQL 248

Query: 320 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           GHG+      PK +        V  ++ GP +   VT  G +++FG G    LGHG++  
Sbjct: 249 GHGDTQDRPTPKMIEVLSS---VVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHD 305

Query: 380 VSTPREVDSL--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG 437
              PR +     KG+  VR + G  H  A+             S+G ++TWG G  G LG
Sbjct: 306 ELQPRPIQKFRRKGIHIVRVSAGDEHAVALD------------SNGFVYTWGKGYCGALG 353

Query: 438 HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANG 495
           HGD+  +  P  + +L      QV      T  L  +G VY  GS  +G LG  D + + 
Sbjct: 354 HGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSD 413

Query: 496 K-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
           K L  R+   L  + V +I+ G YH  V+TSR +++ +G     +LGH
Sbjct: 414 KVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGH 461



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 139/295 (47%), Gaps = 21/295 (7%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P+ VES   +  + +A G      +T+QG V++ G    G+LGHG   D   PK+I+ 
Sbjct: 205 FRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIEV 264

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEGI 340
           L +  V  +A G  +  +VT +G +Y++G S  NF  LGHG +     P+ +     +GI
Sbjct: 265 LSS--VVQIAAGPSYILSVTENGTVYSFG-SGANF-CLGHGEQHDELQPRPIQKFRRKGI 320

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
           H+  VS G  H   + S G ++T+G G  G LGHGD I  +TP  + SLK    V+    
Sbjct: 321 HIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCAR 380

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR---LVPTCVAALVEPN 457
              T  +V            +SG ++ +G    G LG  D+      L P  +  L   +
Sbjct: 381 KRKTFVLV------------NSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHH 428

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVE 511
             Q+S G   TV +T+ G ++  G     QLG       L PT++  K T   VE
Sbjct: 429 VSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTQIFIKDTSEDVE 483



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 137/283 (48%), Gaps = 25/283 (8%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSC 347
           +  G++HT  ++ S  +Y+ G   C  G+LG G+E +  +   +  + PL    V  VS 
Sbjct: 116 ITTGKYHTLLISNS-SVYSCGSGLC--GVLGQGSETTQCVAFTRIDSPPLP--RVVHVSA 170

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAA 406
              H A V  +G++FT GD +    GH D    +  PR V+SLKG+   + A G+  T  
Sbjct: 171 SFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVF 230

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
           +               G ++T G    G+LGHGD + R  P  +  L   +  Q++ G S
Sbjct: 231 LTR------------QGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL--SSVVQIAAGPS 276

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN--FVEEIACGDYHVAVLT 524
             +++T  G VY+ GS     LG  + + +L  R   K  +    +  ++ GD H   L 
Sbjct: 277 YILSVTENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALD 336

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
           S   VYTWGKG  G LGHGD  ++  P L+ +LK+ Q+   VC
Sbjct: 337 SNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKN-QLAVQVC 378



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 143/343 (41%), Gaps = 28/343 (8%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKLIDALKNINVELVACGEHHTCA 299
           G++  L+     V+S G  L G LG G ++   V+  + ID+     V  V+   +H   
Sbjct: 119 GKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTR-IDSPPLPRVVHVSASFNHAAF 177

Query: 300 VTLSGDMYTWG--GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           V  SG+++T G   S+C     GH +        +L   L+GI    V+ G   T  +T 
Sbjct: 178 VMQSGEVFTCGDNSSSC----CGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTR 233

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G ++T G  T G LGHGD     TP+ ++ L  +  V+ A G  +  +V E        
Sbjct: 234 QGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSV--VQIAAGPSYILSVTE-------- 283

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP--NFCQVSCGHSLTVALTTTG 475
               +G ++++G G    LGHG++   L P  +        +  +VS G    VAL + G
Sbjct: 284 ----NGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNG 339

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VYT G    G LG      K    +   L      ++        VL +   VY +G  
Sbjct: 340 FVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSM 399

Query: 536 ANGRLGHGD---TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G LG  D   +D    P +++ L+   V  I  G   T  I
Sbjct: 400 GFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVI 442


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 178/391 (45%), Gaps = 48/391 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G ++ WG   G+G LG G +R          S  P  V+  +  D+  +  G  H+A + 
Sbjct: 271 GTLWTWGH-GGNGRLGLGHNRG---------SLSPAVVDYILDRDIVFVNAGDSHSACID 320

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           +QG +++WG    GRLGHG   ++  P+ ++    + V  VACG  HT A+T  G ++ W
Sbjct: 321 RQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAW 380

Query: 310 G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           G G    FG    G+   + +PK L+  +E   V +++ GP+H+A VT  G L  +G G 
Sbjct: 381 GAGLALGFGEGEDGSGGMVAVPKHLS-DIEAA-VLNIAAGPYHSAAVTVGGDLLVWGVGG 438

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
              LGHGD+ +   P+ V  L+    V          + ++ M+G S             
Sbjct: 439 SSRLGHGDQQNQPFPKYVADLRNRMYV----------SDLQSMLGVS------------- 475

Query: 429 GDGDRGRLGHGDKEARLVP-TCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
               R +  + D +   VP T            + CG S T+ALT  G V+  GS   GQ
Sbjct: 476 ----RLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQ 531

Query: 488 LG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           LG   D + +   P ++E   T   +  IACG  H   +    +V+ WG   NG+LG G 
Sbjct: 532 LGLGEDVEEDQYEPVKLECFSTP--IRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGV 589

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                 P+ V AL  +Q   + CG  ++A I
Sbjct: 590 VRPSFEPAAVTAL--RQAVDVFCGDDYSACI 618



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 160/375 (42%), Gaps = 63/375 (16%)

Query: 238 IACGGRHAALVTKQ-----GEVFSWGEELGGRLGH---------GVDSDVS--------- 274
           ++CG  ++A++ K+     G+V+++G    GRLG+         G   D S         
Sbjct: 107 VSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPS 166

Query: 275 ----HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP 330
                P  +       +  ++CG  HT A++  G +Y WG  +  +G LG G+    + P
Sbjct: 167 WFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGS--YGNLGQGDTSDSYTP 224

Query: 331 KKLNGPLEG------------------IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
            ++    E                   + V+  S G  H+   TS G L+T+G G  G L
Sbjct: 225 VRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRL 284

Query: 373 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           G G      +P  VD +     V    G  H+A +               G L+TWG G 
Sbjct: 285 GLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDR------------QGVLYTWGSGG 332

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV---YGQLG 489
            GRLGHGD+    VP  V         QV+CG   T+ALT  G V+  G+ +   +G+ G
Sbjct: 333 FGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGE-G 391

Query: 490 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
           +  + G +         +  V  IA G YH A +T   ++  WG G + RLGHGD  ++ 
Sbjct: 392 EDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQP 451

Query: 550 FPSLVEALKDKQVKS 564
           FP  V  L+++   S
Sbjct: 452 FPKYVADLRNRMYVS 466



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 183/483 (37%), Gaps = 106/483 (21%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           D  G ++ WG         GG  R G   G + +  VP+ VE    + V  +ACG  H  
Sbjct: 320 DRQGVLYTWGS--------GGFGRLGH--GDQGEIPVPRKVEGFGGVPVLQVACGTFHTL 369

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL--VACGEHHTCAVTLSG 304
            +T +G VF+WG  L    G G D       +   L +I   +  +A G +H+ AVT+ G
Sbjct: 370 ALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGG 429

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS--------------------- 343
           D+  WG    +   LGHG++ +   PK +      ++VS                     
Sbjct: 430 DLLVWGVGGSS--RLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVL 487

Query: 344 ----------------SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 387
                           S+ CG  HT  +T AG ++ +G    G LG G+ +       V 
Sbjct: 488 DVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV- 546

Query: 388 SLKGLRTV--RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
            L+   T   R ACG  H  AV +             G +F WG  D G+LG G      
Sbjct: 547 KLECFSTPIRRIACGSKHCLAVAQY------------GDVFAWGANDNGQLGLGVVRPSF 594

Query: 446 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-----NGKL--- 497
            P  V AL +     V CG   +  +T+ G   ++      + GD  A     +GKL   
Sbjct: 595 EPAAVTALRQA--VDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLG 652

Query: 498 ----------PTRVE----------GKLTKNFVEEIAC--------GDYHVAVLTSRTEV 529
                     P +V             L     + + C        G  H   +T++ E 
Sbjct: 653 EDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGEC 712

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK--WVSGVDQS 587
           Y WG G  GRLG G T +   P+  +  K  +++S+  G   + A+ +    W  G  + 
Sbjct: 713 YAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRRED 772

Query: 588 MCS 590
            CS
Sbjct: 773 TCS 775



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 136/340 (40%), Gaps = 65/340 (19%)

Query: 286 NVELVACGEHHTCAVTLSGD---MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +V+ VA G +HT  V L GD   ++ WG +  N  +LG G E+   +   L      +  
Sbjct: 47  SVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSN--VLGMGVEIRERVFPGLVPFFSKMGT 104

Query: 343 SSVSCGPWHTAVVTS-----AGQLFTFGDGTFGVLGH----------------------G 375
             VSCG  ++AV+        G+++TFG G  G LG+                      G
Sbjct: 105 FEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDG 164

Query: 376 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
                  P  V      +  R +CG  HT A+ +             G L+ WG G  G 
Sbjct: 165 PSWFTPKPSRVRFRDKCKIARISCGADHTLALSD------------EGALYAWGVGSYGN 212

Query: 436 LGHGDKEARLVPTCV----------------AALVEPNFCQVSC---GHSLTVALTTTGH 476
           LG GD      P  V                   V  +   V+C   G   ++A T+ G 
Sbjct: 213 LGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGT 272

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           ++T G    G+LG     G L P  V+  L ++ V  +  GD H A +  +  +YTWG G
Sbjct: 273 LWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVF-VNAGDSHSACIDRQGVLYTWGSG 331

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             GRLGHGD  +   P  VE      V  + CGT  T A+
Sbjct: 332 GFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLAL 371



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 166/458 (36%), Gaps = 126/458 (27%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG       LG G    GS   V     VPK + S +   V NIA G  H+A VT
Sbjct: 375 GTVFAWGAGLA---LGFGEGEDGSGGMVA----VPKHL-SDIEAAVLNIAAGPYHSAAVT 426

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN------------------------- 284
             G++  WG     RLGHG   +   PK +  L+N                         
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486

Query: 285 -------------INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK 331
                          ++ + CGE HT A+T +G ++ WG ++     LG   E   + P 
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV 546

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
           KL        +  ++CG  H   V   G +F +G    G LG G       P  V +L+ 
Sbjct: 547 KLE--CFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR- 603

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSS--GKLFTWGDGDRGRLGHGD--------- 440
            + V   CG  ++A +  +    S S    +  G L+ WG  + G+LG G+         
Sbjct: 604 -QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILT 662

Query: 441 --KEARLVPTCVAAL-------VEPNFC----QVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
             K    VP C  +L        +  FC     +  G S ++A+T  G  Y  G+  YG+
Sbjct: 663 PQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGR 722

Query: 488 LG-DPKANGKLPTR-----------------------VEGKL-----------TKNF--- 509
           LG    AN   PTR                       ++G L           T N+   
Sbjct: 723 LGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSP 782

Query: 510 --------------VEEIACGDYHVAVLTSRTEVYTWG 533
                         V+ I+  + H   +T   EV+ WG
Sbjct: 783 RIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWG 820



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 149/377 (39%), Gaps = 91/377 (24%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V++WG    DG LG G         V+ D + P  +E      ++ IACG +H   V 
Sbjct: 519 GAVWVWGS-NDDGQLGLG-------EDVEEDQYEPVKLE-CFSTPIRRIACGSKHCLAVA 569

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG----- 304
           + G+VF+WG    G+LG GV      P  + AL+   V++    ++  C  +L G     
Sbjct: 570 QYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQA-VDVFCGDDYSACITSLGGAQSVS 628

Query: 305 --------DMYTWGGSNCNFGLLGHGNEM---SLWLPKKLN----------GPLEGIHVS 343
                   D++ WG +    G LG G ++   S+  P+K+             LE     
Sbjct: 629 GETGTEFGDLWAWGAAES--GKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYK 686

Query: 344 SVSC--------GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            V C        G  H+  +T+ G+ + +G G +G LG G   +  TP   D  KG+R  
Sbjct: 687 RVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLR 746

Query: 396 RAACGVWHTAAVV---EVMVGSSSSSNCSS------------------------------ 422
             A G  H+ A+    ++         CS+                              
Sbjct: 747 SVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERH 806

Query: 423 -------GKLFTWGDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQ-VSCGHSLTVALT 472
                  G++F WGD    + G G ++A  +  P  VA L  P+ CQ V+ G   +  + 
Sbjct: 807 SLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGL--PSACQWVATGPQGSFFIL 864

Query: 473 TTGHVYTMGSPVYGQLG 489
            +G V+  G    G+LG
Sbjct: 865 ASGEVFAAGVIKSGRLG 881



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 119/293 (40%), Gaps = 32/293 (10%)

Query: 161 LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGEC------TGDGILGGGIHR---- 210
             GD +   ++S     +Q    + G   GD++ WG         G+ +  G I      
Sbjct: 609 FCGDDYSACITSL--GGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKV 666

Query: 211 --SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG 268
             S       +DS   +A +    +    +  G  H+  +T QGE ++WG    GRLG G
Sbjct: 667 VFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIG 726

Query: 269 VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG--GSNCNFGLLGHGNEMS 326
             ++   P   D  K + +  VA G  H+ A+++ GD++ WG     C+       N MS
Sbjct: 727 TTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCS-----TTNYMS 781

Query: 327 LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
             +  +L G      V S+S    H+  VT AG++F +GD      G G R        +
Sbjct: 782 PRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKR----QAERL 837

Query: 387 DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG 439
           D  + +  + +AC    T       +        +SG++F  G    GRLG G
Sbjct: 838 DRPERVAGLPSACQWVATGPQGSFFI-------LASGEVFAAGVIKSGRLGTG 883


>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
          Length = 2101

 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 195/449 (43%), Gaps = 71/449 (15%)

Query: 170  LSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDG------ILGGGIHRSGSY--------- 214
            +SS ++S   G+  D+G   G   +WG+  G        I  GG  RS +          
Sbjct: 1674 ISSRMTSVRAGAA-DEGPVPGLALVWGKPLGLSLDEEAHISQGG--RSATLCLRPTAENA 1730

Query: 215  AGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
            + ++M SF P+ +   V      IACG RH AL+T    ++++G    GRLGHG   D +
Sbjct: 1731 SPIRMASF-PRPLRRVV-----QIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCT 1784

Query: 275  HP-------KLIDA--LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 325
             P        LI+A  +    V  V+CG  HT AVT SGD++ +G      G LG G   
Sbjct: 1785 EPVSVGYFTSLIEAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWGEA--GRLGTGETG 1842

Query: 326  SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPRE 385
            S   P ++    +  ++++V+CG  HT  +T  G++F FG G  G LG+G       P  
Sbjct: 1843 SSLYPTRVT---DLQNIAAVACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFA 1899

Query: 386  VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
            V  L+  R      G  H+ A+             + G + TWG G  G LGHGD++  L
Sbjct: 1900 VQGLEDYRIAAIDAGECHSCAL------------STEGDVLTWGFGSSGALGHGDRDNCL 1947

Query: 446  VPTCV-------AALVEPN-------FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-- 489
             P  +       A   E N          ++CG   T+A T+ G +Y  G    GQL   
Sbjct: 1948 EPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVE 2007

Query: 490  ---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
                P+     P R+    T + +  +ACG +  AV T++  ++ WG  A G     + D
Sbjct: 2008 YITAPEMVVLTPQRIRVP-TNSGIRSVACGTFTSAVCTNQGHLFLWGSPAAGNGAPLEVD 2066

Query: 547  DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            D      +  L + +   + CG     AI
Sbjct: 2067 DARVKR-IGVLGEFEFSQVACGAYHAVAI 2094



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 136/316 (43%), Gaps = 43/316 (13%)

Query: 290  VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV---- 345
            +ACG  HT  +T    +YT+G   C  G LGHGN+     P  +      I    V    
Sbjct: 1748 IACGYRHTALITDDRHLYTFGHGEC--GRLGHGNQEDCTEPVSVGYFTSLIEAEGVDVGG 1805

Query: 346  ----SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
                SCG  HT  VT++G LF FG G  G LG G+  S   P  V  L+ +  V  ACG 
Sbjct: 1806 VVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDLQNIAAV--ACGR 1863

Query: 402  WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
             HT A+               G++F +G G  GRLG+G +    +P  V  L +     +
Sbjct: 1864 EHTLALTR------------KGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAI 1911

Query: 462  SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKN------------ 508
              G   + AL+T G V T G    G LG    +  L P R+EG  T N            
Sbjct: 1912 DAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASET 1971

Query: 509  -FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF----PSLVEALKDKQVK 563
              V  IACG YH    TS   +Y WG  A G+L              P  +    +  ++
Sbjct: 1972 SVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGIR 2031

Query: 564  SIVCGTSFTAAICLHK 579
            S+ CGT FT+A+C ++
Sbjct: 2032 SVACGT-FTSAVCTNQ 2046



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 137/308 (44%), Gaps = 36/308 (11%)

Query: 239  ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
            +CG  H   VT  G++F +G    GRLG G      +P  +  L+NI    VACG  HT 
Sbjct: 1810 SCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDLQNIAA--VACGREHTL 1867

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A+T  G ++ +G      G LG+G+E    LP  + G LE   ++++  G  H+  +++ 
Sbjct: 1868 ALTRKGRVFAFGAGFG--GRLGNGSETDEELPFAVQG-LEDYRIAAIDAGECHSCALSTE 1924

Query: 359  GQLFTFGDGTFGVLGHGDRISVSTPREVD------SLKG-------LRTVRA-ACGVWHT 404
            G + T+G G+ G LGHGDR +   PR ++      ++ G          V A ACG +HT
Sbjct: 1925 GDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHT 1984

Query: 405  AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG----HGDKEARLVPTCVAALVEPNFCQ 460
             A              S G L+ WGD   G+L        +   L P  +          
Sbjct: 1985 LAAT------------SDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGIRS 2032

Query: 461  VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
            V+CG   +   T  GH++  GSP  G  G P        +  G L +    ++ACG YH 
Sbjct: 2033 VACGTFTSAVCTNQGHLFLWGSPAAGN-GAPLEVDDARVKRIGVLGEFEFSQVACGAYHA 2091

Query: 521  AVLTSRTE 528
              +T + E
Sbjct: 2092 VAITRKLE 2099



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 146/313 (46%), Gaps = 66/313 (21%)

Query: 186  GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIA---CGG 242
            GD  G  F WGE    G LG G   +GS       S  P  V      D+QNIA   CG 
Sbjct: 1823 GDLFG--FGWGEA---GRLGTG--ETGS-------SLYPTRVT-----DLQNIAAVACGR 1863

Query: 243  RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTL 302
             H   +T++G VF++G   GGRLG+G ++D   P  +  L++  +  +  GE H+CA++ 
Sbjct: 1864 EHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAIDAGECHSCALST 1923

Query: 303  SGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-------------VSSVSCG 348
             GD+ TWG GS+   G LGHG+  +   P+++ GP  G               VS+++CG
Sbjct: 1924 EGDVLTWGFGSS---GALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACG 1980

Query: 349  PWHTAVVTSAGQLFTFGDGTFGVLG----HGDRISVSTPR--EVDSLKGLRTVRAACGVW 402
             +HT   TS G L+ +GD   G L         + V TP+   V +  G+R+V  ACG +
Sbjct: 1981 SYHTLAATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGIRSV--ACGTF 2038

Query: 403  HTAAVVEVMVGSSSSSNCSSGKLFTWGD---GDRGRLGHGDKEARLVPTCVAALVEPNFC 459
             +A               + G LF WG    G+   L   D   +     +  L E  F 
Sbjct: 2039 TSAVCT------------NQGHLFLWGSPAAGNGAPLEVDDARVKR----IGVLGEFEFS 2082

Query: 460  QVSCGHSLTVALT 472
            QV+CG    VA+T
Sbjct: 2083 QVACGAYHAVAIT 2095


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 172/349 (49%), Gaps = 30/349 (8%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           +++   A G  H+ L+     V+S G+   G+LG   D     P+ I AL +++V+LV+C
Sbjct: 22  IELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSC 81

Query: 293 GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           G+ H+ AV   G ++ WG GS    G +G   E+S ++P K+   L GI +  VSCG +H
Sbjct: 82  GKEHSVAVCHKGKVFAWGAGSEGQLG-IGEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYH 138

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +  ++  G +F++G  + G LG G +  S + P++V SL+G+   + A G          
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAG---------- 188

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
             G+ S +   +G  F WG    G+L   G+  KE    P  + AL   +   +SCG+  
Sbjct: 189 --GTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEH 246

Query: 468 TVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTS 525
           T  LT  G V+T G    GQL   P++  + P  +EG      V +I C  YH +A + +
Sbjct: 247 TAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG--IGGRVSQIECASYHTIAYVYT 304

Query: 526 RTEVYTWGKG----ANGRLGHGDTDDRNFPSLV--EALKDKQVKSIVCG 568
             +V + G+G    +N        ++ +   L+  E L D +VK I  G
Sbjct: 305 TGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAG 353



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 120/252 (47%), Gaps = 19/252 (7%)

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P++L     GI +   + G  H+ ++ S  ++++ GD ++G LG     S   P  + +L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPT 448
             L     +CG  H+ AV            C  GK+F WG G  G+LG G+ KE   +PT
Sbjct: 72  NDLHVDLVSCGKEHSVAV------------CHKGKVFAWGAGSEGQLGIGEFKEISFMPT 119

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLT 506
            + AL      QVSCGH  ++AL+  GHV++ G    GQLG  K   +  +P +V+  L 
Sbjct: 120 KIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LE 178

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVK 563
              + ++A G  H   L+     + WG   +G+L   G+   +    P  + ALK+  V 
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238

Query: 564 SIVCGTSFTAAI 575
            I CG   TA +
Sbjct: 239 YISCGYEHTAVL 250



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 22/264 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDAL 282
           P+ +++   L V  ++CG  H+  V  +G+VF+WG    G+LG G   ++S  P  I AL
Sbjct: 65  PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIH 341
             I +  V+CG +H+ A++  G +++WG ++   G LG G N  S  +P+K+   LEGI 
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSE--GQLGLGKNSRSQAIPQKVKS-LEGIP 181

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           ++ V+ G  H+  ++  G  F +G    G   + G+  +  +  P  + +LK L  +  +
Sbjct: 182 LAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYIS 241

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HTA + E             G++FT+G    G+L    +  +  P  +   +    
Sbjct: 242 CGYEHTAVLTE------------EGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG-IGGRV 288

Query: 459 CQVSCGHSLTVA-LTTTGHVYTMG 481
            Q+ C    T+A + TTG V ++G
Sbjct: 289 SQIECASYHTIAYVYTTGQVVSLG 312



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 13/221 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG    +G LG G          K  SF+P  +++   + +  ++CG  H+  ++
Sbjct: 93  GKVFAWG-AGSEGQLGIG--------EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALS 143

Query: 250 KQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           + G VFSWG    G+LG G +S   + P+ + +L+ I +  VA G  H+ A++L+G  + 
Sbjct: 144 EDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG 203

Query: 309 WGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG +      L G+  +  ++ P  + G L+ + V  +SCG  HTAV+T  GQ+FTFG  
Sbjct: 204 WGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFGGN 262

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           + G L    R     P+ ++ + G R  +  C  +HT A V
Sbjct: 263 SSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYV 302



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 204 LGGGIHRSGSYA----GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
            G G +RSG  A     VK   + P ++ +   L V  I+CG  H A++T++G+VF++G 
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 261

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 310
              G+L     S    P+LI+ +    V  + C  +HT A V  +G + + G
Sbjct: 262 NSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLG 312



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
           A  + P R++   +   + + A G++H  +L S   VY+ G  + G+LG         P 
Sbjct: 7   AGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPE 66

Query: 553 LVEALKDKQVKSIVCGTSFTAAICLHK 579
            ++AL D  V  + CG   + A+C HK
Sbjct: 67  PIQALNDLHVDLVSCGKEHSVAVC-HK 92


>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cricetulus griseus]
          Length = 1136

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 170/354 (48%), Gaps = 59/354 (16%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  S +S P  I ALK   V+L ACG +HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGN--------EMSLWLPKKLNGPLEGIHVSSVSCGP 349
              T  G +Y  GG+N   G LG G+        ++  + PK         ++  +S G 
Sbjct: 138 LVSTDKGSVYAAGGNNE--GQLGLGDTDDRDTFHQIGFFTPKD--------NIKQLSAGA 187

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             +A +T  G+LF +GD + G +G  ++ +V  P EV   K +  +  +CG +H+A V  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV----PTCVAALVEPNFCQVSCGH 465
                        G+L+T+G+ + G+LG  ++   L+    P  V  + E    QV+CG 
Sbjct: 245 -----------VDGELYTFGEPENGKLGLPNQ--LLINHRSPQRVLGIPE-KVIQVACGG 290

Query: 466 SLTVALTTTGHVYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNFVEEIACG 516
             TV LT    VY  G   +GQLG         +PK        V  ++    +  I+CG
Sbjct: 291 GHTVVLTDK-VVYAFGLGQFGQLGLGTFLFETSEPK--------VIERIKDQKISYISCG 341

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           + H A++T    +YT+G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 342 ENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACG 395



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 161/342 (47%), Gaps = 49/342 (14%)

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           +LV   G VF++G+    +    + S           KN     ++CG+ HT  VT +  
Sbjct: 44  SLVPDTGAVFTFGK---TKFAENIPSKF-------WFKNDIPICLSCGDEHTAIVTGNNK 93

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG  HT V T  G ++  G
Sbjct: 94  LYMFGSNN--WGQLGLGSKSAISKPTCIKA-LKPEKVKLAACGRNHTLVSTDKGSVYAAG 150

Query: 366 DGTFGVLGHGD--------RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
               G LG GD        +I   TP+  D++K L     + G   +AA+ E        
Sbjct: 151 GNNEGQLGLGDTDDRDTFHQIGFFTPK--DNIKQL-----SAGANTSAALTE-------- 195

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
                GKLF WGD   G++G  +K    +P  V   V      +SCG+  +  +T  G +
Sbjct: 196 ----DGKLFMWGDNSEGQIGLKNKSNVCIPHEVT--VGKPISWISCGYYHSAFVTVDGEL 249

Query: 478 YTMGSPVYGQLGDPKA---NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           YT G P  G+LG P     N + P RV G   K  V ++ACG  H  VLT +  VY +G 
Sbjct: 250 YTFGEPENGKLGLPNQLLINHRSPQRVLGIPEK--VIQVACGGGHTVVLTDKV-VYAFGL 306

Query: 535 GANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G  G+LG G    + + P ++E +KD+++  I CG + TA +
Sbjct: 307 GQFGQLGLGTFLFETSEPKVIERIKDQKISYISCGENHTALM 348



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 151/314 (48%), Gaps = 37/314 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           P  +++     V+  ACG  H  + T +G V++ G    G+LG G   D D  H      
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT 175

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            K+ N++ ++ G + + A+T  G ++ WG ++   G +G  N+ ++ +P ++     G  
Sbjct: 176 PKD-NIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLKNKSNVCIPHEVTV---GKP 229

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAAC 399
           +S +SCG +H+A VT  G+L+TFG+   G LG  +++ ++  +P+ V  +   + ++ AC
Sbjct: 230 ISWISCGYYHSAFVTVDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPE-KVIQVAC 288

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNF 458
           G  HT  + + +V             + +G G  G+LG G        P  +  + +   
Sbjct: 289 GGGHTVVLTDKVV-------------YAFGLGQFGQLGLGTFLFETSEPKVIERIKDQKI 335

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF----VE 511
             +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L  NF    V+
Sbjct: 336 SYISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPT-----LCSNFLRFTVQ 390

Query: 512 EIACGDYHVAVLTS 525
            IACG  H+ V  +
Sbjct: 391 LIACGGCHMLVFAT 404



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 24/233 (10%)

Query: 146 LSSGGSDGR-TGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGIL 204
           L  G +D R T H  G       +   SA +++S     D     G +F+WG+       
Sbjct: 157 LGLGDTDDRDTFHQIGFFTPKDNIKQLSAGANTSAALTED-----GKLFMWGD------- 204

Query: 205 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 264
                 S    G+K  S V    E  V   +  I+CG  H+A VT  GE++++GE   G+
Sbjct: 205 -----NSEGQIGLKNKSNVCIPHEVTVGKPISWISCGYYHSAFVTVDGELYTFGEPENGK 259

Query: 265 LGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
           LG      ++H  P+ +  +    ++ VACG  HT  +T   D   +      FG LG G
Sbjct: 260 LGLPNQLLINHRSPQRVLGIPEKVIQ-VACGGGHTVVLT---DKVVYAFGLGQFGQLGLG 315

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
             +      K+   ++   +S +SCG  HTA++T  G ++TFGDG  G LG G
Sbjct: 316 TFLFETSEPKVIERIKDQKISYISCGENHTALMTDIGLMYTFGDGRHGKLGLG 368


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 182/384 (47%), Gaps = 55/384 (14%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGH-------GVDSDVSH 275
           +P+ V + + + ++ +ACGG H A V   G V++WG    G+LGH       G+  +V+ 
Sbjct: 27  LPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSEVGLPGEVAM 86

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLN 334
           P+ + AL        + G +HT  V  SG ++++G   CN  G LG G ++ L    +L 
Sbjct: 87  PERVVAL--------SAGYYHTLCVGESGSVWSFG---CNGKGQLGLGKDVVLVREPRLV 135

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD----RISVST----PREV 386
             L+   V +V+ G  H+  +T+ G+++++G+   G LGHG     R+  S+    PR V
Sbjct: 136 KSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLV 195

Query: 387 DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV 446
            + + LR  + + G  H+AAV             ++G  F WG G   +LG G  E    
Sbjct: 196 RAFEALRVEQVSAGQMHSAAV------------STAGDAFLWGYGKFHQLGFGSDEDLAG 243

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT 506
           PT +  L + +   V+CG   ++AL   GHV   G+   G LG      + P R   K+ 
Sbjct: 244 PTVLPPL-KGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQQQPKRPS-KVP 301

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWG--------------KGANGRLGHGDTDDRNFPS 552
               E+IA G  H A +T   ++YTWG               G  G+LGHG+  D   P 
Sbjct: 302 GVSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPH 361

Query: 553 LVEALKDKQVKSIVCGTSFTAAIC 576
            V+ L   +   + CG + TAAI 
Sbjct: 362 HVDWLSLTETDLVACGMNHTAAIV 385



 Score =  104 bits (260), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 123/240 (51%), Gaps = 21/240 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+V+ WG    +G LG G        G  ++ F+P+ V +   L V+ ++ G  H+A V+
Sbjct: 160 GEVYSWGNAA-NGRLGHGSATPRRLFGSSIE-FLPRLVRAFEALRVEQVSAGQMHSAAVS 217

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G+ F WG     +LG G D D++ P ++  LK  +   VACG  H+ A+   G +  W
Sbjct: 218 TAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKG-STAAVACGSLHSLALQYGGHVLAW 276

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---- 365
            G+N N G+LG G+E     PK+ +  + G+    ++ G  H+A VT +G+L+T+G    
Sbjct: 277 -GTNQN-GVLGQGHEKQQ-QPKRPS-KVPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGS 332

Query: 366 ----------DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
                      GT G LGHG+     +P  VD L    T   ACG+ HTAA+VE+  G S
Sbjct: 333 QGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSLTETDLVACGMNHTAAIVELDSGVS 392



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 111/226 (49%), Gaps = 25/226 (11%)

Query: 361 LFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
           L TFG+G  G LGH  +  S   PR V +L G+     ACG  HTAAV +          
Sbjct: 5   LATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDD---------- 54

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
             SG ++TWG  D+G+LGH  +++ + +P  VA  +      +S G+  T+ +  +G V+
Sbjct: 55  --SGTVYTWGLNDKGQLGHDSEDSEVGLPGEVA--MPERVVALSAGYYHTLCVGESGSVW 110

Query: 479 TMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
           + G    GQLG  K    +   R+   L  N V  +A G  H   LT+  EVY+WG  AN
Sbjct: 111 SFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAAN 170

Query: 538 GRLGHGDTDDRN--------FPSLVEALKDKQVKSIVCGTSFTAAI 575
           GRLGHG    R          P LV A +  +V+ +  G   +AA+
Sbjct: 171 GRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAV 216



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 140/285 (49%), Gaps = 37/285 (12%)

Query: 306 MYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           + T+G  +C  G LGH  E  S  LP+ +   L G+ + +V+CG  HTA V  +G ++T+
Sbjct: 5   LATFGNGDC--GRLGHSLEYASEELPRVVR-ALLGVPLKAVACGGAHTAAVDDSGTVYTW 61

Query: 365 GDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           G    G LGH    S V  P EV   +  R V  + G +HT  V E            SG
Sbjct: 62  GLNDKGQLGHDSEDSEVGLPGEVAMPE--RVVALSAGYYHTLCVGE------------SG 107

Query: 424 KLFTWGDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            ++++G   +G+LG G K+  LV  P  V +L +     V+ G   ++ALT  G VY+ G
Sbjct: 108 SVWSFGCNGKGQLGLG-KDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWG 166

Query: 482 SPVYGQLGDPKANGKLPTRVEG-------KLTKNF----VEEIACGDYHVAVLTSRTEVY 530
           +   G+LG   A    P R+ G       +L + F    VE+++ G  H A +++  + +
Sbjct: 167 NAANGRLGHGSAT---PRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAF 223

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            WG G   +LG G  +D   P+++  LK     ++ CG+  + A+
Sbjct: 224 LWGYGKFHQLGFGSDEDLAGPTVLPPLKGS-TAAVACGSLHSLAL 267


>gi|403335798|gb|EJY67083.1| hypothetical protein OXYTRI_12623 [Oxytricha trifallax]
          Length = 1128

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 169/368 (45%), Gaps = 46/368 (12%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV---SHPKLI 279
           +PK++   V+  +Q ++CG  H + ++KQG VFS+G    G+LG   D  +   S P LI
Sbjct: 34  LPKSLSFEVL--IQQVSCGSAHTSFISKQGYVFSFGCNSDGQLGVN-DPAIKFSSAPLLI 90

Query: 280 DALKNI--NVELVACGEHHTCAVTLSGDMYTWG-------GSNCNFGLLGHGNEMSLWLP 330
             L ++  N   ++CG  HT  +T  GD+Y WG       G + N+          ++ P
Sbjct: 91  SDLVSLQTNPVQISCGGFHTAVLTSVGDVYIWGRNLQGQCGRSINYNQF-------MFAP 143

Query: 331 KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK 390
            KL+          V CG  HTAVV+S G+L+TFGD + G LG G     +  R    + 
Sbjct: 144 HKLHTDSANKTFRQVDCGDQHTAVVSSTGELYTFGDNSEGQLGIGVEFKNTVDRAA-LVT 202

Query: 391 GL--RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
           G+   T++ +CG  HT  +             + G +F  G   R  L  G  +    P 
Sbjct: 203 GISEETIQVSCGYKHTLVL------------TNHGTVFGMGTNKRYELASGTLQKSSQPI 250

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTR-VEGKLTK 507
            +  +      ++  G   +VA+T+   +   GS  +G    P+       R V+  L+K
Sbjct: 251 RIQTIDMFAVEKIIAG-GFSVAITSQNELLVWGSGDFGVFQSPQKIFMEDVRFVDVSLSK 309

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
           ++       D   A +  +  VYTWG+   G+LG GD   R  P+ +  L+ K+V+ +V 
Sbjct: 310 SY-------DSFGAAIDDQGFVYTWGQNQFGQLGQGDFRLRKLPTKIPQLRKKKVRQLVA 362

Query: 568 GTSFTAAI 575
           G SF  A+
Sbjct: 363 GGSFIVAL 370



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 127/287 (44%), Gaps = 34/287 (11%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVES-AVVLDVQNIACGGRHAA 246
           S+GDV+IWG       L G   RS +Y       F P  + + +     + + CG +H A
Sbjct: 115 SVGDVYIWGRN-----LQGQCGRSINYNQF---MFAPHKLHTDSANKTFRQVDCGDQHTA 166

Query: 247 LVTKQGEVFSWGEELGGRLGHGVD--SDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
           +V+  GE++++G+   G+LG GV+  + V    L+  +    ++ V+CG  HT  +T  G
Sbjct: 167 VVSSTGELYTFGDNSEGQLGIGVEFKNTVDRAALVTGISEETIQ-VSCGYKHTLVLTNHG 225

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            ++   G+N  +  L  G       P ++   ++   V  +  G +  A +TS  +L  +
Sbjct: 226 TVFGM-GTNKRYE-LASGTLQKSSQPIRIQ-TIDMFAVEKIIAGGFSVA-ITSQNELLVW 281

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G G FGV     +I +   R VD       V  +       A ++             G 
Sbjct: 282 GSGDFGVFQSPQKIFMEDVRFVD-------VSLSKSYDSFGAAID-----------DQGF 323

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
           ++TWG    G+LG GD   R +PT +  L +    Q+  G S  VAL
Sbjct: 324 VYTWGQNQFGQLGQGDFRLRKLPTKIPQLRKKKVRQLVAGGSFIVAL 370



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 24/169 (14%)

Query: 424 KLFTWGDGDRGRLGHGD-----KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
           + F+WG+ + G+LGHG      K+   +P  ++   E    QVSCG + T  ++  G+V+
Sbjct: 7   EFFSWGNDEMGQLGHGQEGPDRKKIFNLPKSLS--FEVLIQQVSCGSAHTSFISKQGYVF 64

Query: 479 TMGSPVYGQLG--DPKAN-GKLPTRVEG--KLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           + G    GQLG  DP       P  +     L  N V +I+CG +H AVLTS  +VY WG
Sbjct: 65  SFGCNSDGQLGVNDPAIKFSSAPLLISDLVSLQTNPV-QISCGGFHTAVLTSVGDVYIWG 123

Query: 534 KGANGRLGHGDTDDRNFPSLVEA-------LKDKQVKSIVCGTSFTAAI 575
           +   G+ G       N+   + A         +K  + + CG   TA +
Sbjct: 124 RNLQGQCGRS----INYNQFMFAPHKLHTDSANKTFRQVDCGDQHTAVV 168


>gi|449662010|ref|XP_002161644.2| PREDICTED: uncharacterized protein LOC100207375 [Hydra
           magnipapillata]
          Length = 677

 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 151/316 (47%), Gaps = 35/316 (11%)

Query: 278 LIDALKN-INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
           L+  L N I +  V+ G  H   ++    ++TWG ++  FG LG G+      P ++   
Sbjct: 29  LVKGLPNKIQITEVSVGLGHLAVISTERGIFTWGDNS--FGQLGVGDNEPRNQPTEIES- 85

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
           L G  V SV+CG + TA +T  G + T G G FG LGHGD +S++TP+ VD L  L    
Sbjct: 86  LRGKCVISVACGNYFTAFLTDNGLVLTCGQGEFGCLGHGDWLSINTPKLVDELMTLDITS 145

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
              G  H A               S GK++TWG G  GR GHG ++   +P  V+   E 
Sbjct: 146 LVAGSNHVAITT------------SDGKVYTWGCGLDGRTGHGTEDNICIPKLVSFGNEK 193

Query: 457 NFCQ-VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE--- 512
            F Q V C  + TV ++  G+++  GS    +LG     G L  +   K +KN VE+   
Sbjct: 194 VFIQNVQCSSNGTVFISDAGNLFACGSNQGNKLGLNPRQGFL-YQFRSKSSKNIVEKAKV 252

Query: 513 --------------IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
                         +  G  H  +++   +VYT G+   G+LG G+   R   S V+ L+
Sbjct: 253 PTLVKYSCKYQISTMQFGTSHCTMMSVDGKVYTNGENEYGQLGCGNLKPRELLSNVKGLE 312

Query: 559 DKQVKSIVCGTSFTAA 574
           +  V +I CG+SF+ A
Sbjct: 313 EVSVTTIACGSSFSMA 328



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 26/288 (9%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           +F WG+    G LG G +   +          P  +ES     V ++ACG    A +T  
Sbjct: 58  IFTWGD-NSFGQLGVGDNEPRNQ---------PTEIESLRGKCVISVACGNYFTAFLTDN 107

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G V + G+   G LGHG    ++ PKL+D L  +++  +  G +H    T  G +YTWG 
Sbjct: 108 GLVLTCGQGEFGCLGHGDWLSINTPKLVDELMTLDITSLVAGSNHVAITTSDGKVYTWG- 166

Query: 312 SNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
             C   G  GHG E ++ +PK ++   E + + +V C    T  ++ AG LF  G     
Sbjct: 167 --CGLDGRTGHGTEDNICIPKLVSFGNEKVFIQNVQCSSNGTVFISDAGNLFACGSNQGN 224

Query: 371 VLGHGDRI-------SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-S 422
            LG   R        S S+   V+  K    V+ +C       +  +  G+S  +  S  
Sbjct: 225 KLGLNPRQGFLYQFRSKSSKNIVEKAKVPTLVKYSC----KYQISTMQFGTSHCTMMSVD 280

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
           GK++T G+ + G+LG G+ + R + + V  L E +   ++CG S ++A
Sbjct: 281 GKVYTNGENEYGQLGCGNLKPRELLSNVKGLEEVSVTTIACGSSFSMA 328



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 156/349 (44%), Gaps = 49/349 (14%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           M  F+ K + + +   +  ++ G  H A+++ +  +F+WG+   G+LG G +   + P  
Sbjct: 25  MQLFLVKGLPNKI--QITEVSVGLGHLAVISTERGIFTWGDNSFGQLGVGDNEPRNQPTE 82

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           I++L+   V  VACG + T  +T +G + T G     FG LGHG+ +S+  P KL   L 
Sbjct: 83  IESLRGKCVISVACGNYFTAFLTDNGLVLTCGQG--EFGCLGHGDWLSINTP-KLVDELM 139

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD-SLKGLRTVRA 397
            + ++S+  G  H A+ TS G+++T+G G  G  GHG   ++  P+ V    + +     
Sbjct: 140 TLDITSLVAGSNHVAITTSDGKVYTWGCGLDGRTGHGTEDNICIPKLVSFGNEKVFIQNV 199

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL------------ 445
            C    T  + +            +G LF  G     +LG   ++  L            
Sbjct: 200 QCSSNGTVFISD------------AGNLFACGSNQGNKLGLNPRQGFLYQFRSKSSKNIV 247

Query: 446 ----VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG----DPKANGKL 497
               VPT V    +     +  G S    ++  G VYT G   YGQLG     P+   +L
Sbjct: 248 EKAKVPTLVKYSCKYQISTMQFGTSHCTMMSVDGKVYTNGENEYGQLGCGNLKPR---EL 304

Query: 498 PTRVEGKLTKNFVEEIACG-DYHVAVLTSRTE------VYTWGKGANGR 539
            + V+G L +  V  IACG  + +A + ++ +      +Y WG     R
Sbjct: 305 LSNVKG-LEEVSVTTIACGSSFSMAGIHTQLKEHPLNLIYFWGTKPQKR 352



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 92/179 (51%), Gaps = 4/179 (2%)

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGK-LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           G+ +   + EV VG    +  S+ + +FTWGD   G+LG GD E R  PT + +L     
Sbjct: 32  GLPNKIQITEVSVGLGHLAVISTERGIFTWGDNSFGQLGVGDNEPRNQPTEIESLRGKCV 91

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGD 517
             V+CG+  T  LT  G V T G   +G LG     +   P  V+  +T +    +A G 
Sbjct: 92  ISVACGNYFTAFLTDNGLVLTCGQGEFGCLGHGDWLSINTPKLVDELMTLDITSLVA-GS 150

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ-VKSIVCGTSFTAAI 575
            HVA+ TS  +VYTWG G +GR GHG  D+   P LV    +K  ++++ C ++ T  I
Sbjct: 151 NHVAITTSDGKVYTWGCGLDGRTGHGTEDNICIPKLVSFGNEKVFIQNVQCSSNGTVFI 209



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 65/134 (48%), Gaps = 12/134 (8%)

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG----DPKANGKLPTRVEGKLTKNFVEEIAC 515
           +VS G      ++T   ++T G   +GQLG    +P+     PT +E  L    V  +AC
Sbjct: 41  EVSVGLGHLAVISTERGIFTWGDNSFGQLGVGDNEPRNQ---PTEIES-LRGKCVISVAC 96

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G+Y  A LT    V T G+G  G LGHGD    N P LV+ L    + S+V G++  A  
Sbjct: 97  GNYFTAFLTDNGLVLTCGQGEFGCLGHGDWLSINTPKLVDELMTLDITSLVAGSNHVAIT 156

Query: 576 C----LHKWVSGVD 585
                ++ W  G+D
Sbjct: 157 TSDGKVYTWGCGLD 170


>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
          Length = 477

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 175/347 (50%), Gaps = 27/347 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V +I+CG  H +L+   G VF++G+   G+LG G    V+ P  I +LK   V  VACG 
Sbjct: 27  VLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGR 86

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
            HT   T SG +Y++G +N     LG  +E  +  P  + G LE   V  +S G +H+ V
Sbjct: 87  SHTLLATESGKIYSFGCNNDRQLGLGLDDE-KVCSPTVIKG-LESHAVKMLSAGMYHSCV 144

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISV-STPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           +T  G ++ +G G  G LG G+ ++   TP  +D       V  ACG +HTA V      
Sbjct: 145 LTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDD--EVVCIACGYYHTALVT----- 197

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                  + GKL T+G+ D G+LG G D     +P  V   +E +   V+CG + TVA+T
Sbjct: 198 -------AGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDG-IEGHVVSVACGGAHTVAIT 249

Query: 473 TTGHVYTMGSPVYGQL--GDPKANGKLPTR-VEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
               VYT G+   GQL  G+       P + V  K TK  V   +CG+ H A++T R ++
Sbjct: 250 GW-LVYTFGNGSSGQLGHGNMLLQADTPHKIVWQKPTK--VRSASCGENHTALVTDRGQL 306

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVCGTSFTAA 574
           +T G G +G+L  G+ +  N      +++  +  V+ + CG   T A
Sbjct: 307 WTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGGCHTLA 353



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 153/302 (50%), Gaps = 25/302 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDAL 282
           P  ++S     V  +ACG  H  L T+ G+++S+G     +LG G+D + V  P +I  L
Sbjct: 68  PTRIKSLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGL 127

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLW-LPKKLNGPLEGIH 341
           ++  V++++ G +H+C +T  G +Y WGG     G LG G +++    P++L+   E   
Sbjct: 128 ESHAVKMLSAGMYHSCVLTDKGSVYLWGGG--EEGQLGFGEDVTKHETPERLDVDDE--- 182

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACG 400
           V  ++CG +HTA+VT+ G+L TFG+   G LG G D      P+ VD ++G   V  ACG
Sbjct: 183 VVCIACGYYHTALVTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEG-HVVSVACG 241

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFC 459
             HT A+   +V             +T+G+G  G+LGHG+   +   P  +         
Sbjct: 242 GAHTVAITGWLV-------------YTFGNGSSGQLGHGNMLLQADTPHKIVWQKPTKVR 288

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGD 517
             SCG + T  +T  G ++T G   +G+  LG+     +       + +K  VE+++CG 
Sbjct: 289 SASCGENHTALVTDRGQLWTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGG 348

Query: 518 YH 519
            H
Sbjct: 349 CH 350



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 119/238 (50%), Gaps = 20/238 (8%)

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HT+++   G++FTFGD  +G LG G    V+ P  + SLK  +  + ACG 
Sbjct: 27  VLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGR 86

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQ 460
            HT    E            SGK++++G  +  +LG G D E    PT +  L       
Sbjct: 87  SHTLLATE------------SGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKM 134

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDY 518
           +S G   +  LT  G VY  G    GQLG  +     + P R++     + V  IACG Y
Sbjct: 135 LSAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLD---VDDEVVCIACGYY 191

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H A++T+  ++ T+G+   G+LG G DT D   P +V+ + +  V S+ CG + T AI
Sbjct: 192 HTALVTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGI-EGHVVSVACGGAHTVAI 248



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 117/223 (52%), Gaps = 24/223 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V++WG    +G LG G   +      ++D      V+  VV     IACG  H ALVT
Sbjct: 149 GSVYLWGGGE-EGQLGFGEDVTKHETPERLD------VDDEVVC----IACGYYHTALVT 197

Query: 250 KQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
             G++ ++GE   G+LG G D+ D   PK++D ++  +V  VACG  HT A+T    +YT
Sbjct: 198 AGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEG-HVVSVACGGAHTVAIT-GWLVYT 255

Query: 309 WGGSNCNFGLLGHGNE-MSLWLPKKL--NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +G  N + G LGHGN  +    P K+    P +   V S SCG  HTA+VT  GQL+T G
Sbjct: 256 FG--NGSSGQLGHGNMLLQADTPHKIVWQKPTK---VRSASCGENHTALVTDRGQLWTCG 310

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTV--RAACGVWHTAA 406
           DG  G L  G+    +  +   S++  + V  + +CG  HT A
Sbjct: 311 DGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGGCHTLA 353



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEE 512
           E     +SCG   T  L   G V+T G   +GQ  LG  K   K PTR++  L    V +
Sbjct: 24  EDKVLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTK-PTRIK-SLKAEKVHQ 81

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQVKSIVCG 568
           +ACG  H  + T   ++Y++G   + +LG G  D++   P++++ L+   VK +  G
Sbjct: 82  VACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAG 138


>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 1035

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 171/354 (48%), Gaps = 59/354 (16%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  S +S P  I ALK   V+L ACG +HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGN--------EMSLWLPKKLNGPLEGIHVSSVSCGP 349
              T +G +Y  GG+N   G LG G+        ++  + P  +        +  +S G 
Sbjct: 138 LVSTDTGGVYAAGGNNE--GQLGLGDTDDRDTFHQIGFFTPSDI--------IKQLSAGA 187

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             +A +T  G+LF +GD + G +G  ++ +V  P EV   K +  +  +CG +H+A V  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV----PTCVAALVEPNFCQVSCGH 465
                      + G+L+T+G+ + G+LG  ++   L+    P  V  + +    QV+CG 
Sbjct: 245 -----------TDGELYTFGEPENGKLGLPNQ--LLINHRSPQRVLGIPD-KVIQVACGG 290

Query: 466 SLTVALTTTGHVYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNFVEEIACG 516
             TV LT    VY  G   +GQLG         +PK        +  ++    +  I+CG
Sbjct: 291 GHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPK--------IIDRIKDQKISHISCG 341

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           + H A++T    +YT+G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 342 ENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 150/314 (47%), Gaps = 37/314 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           P  +++     V+  ACG  H  + T  G V++ G    G+LG G   D D  H      
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT 175

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
             +I ++ ++ G + + A+T  G ++ WG ++   G +G  N+ ++ +P ++     G  
Sbjct: 176 PSDI-IKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLKNKSNVCIPHEVTV---GKP 229

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAAC 399
           +S +SCG +H+A VT+ G+L+TFG+   G LG  +++ ++  +P+ V  +   + ++ AC
Sbjct: 230 ISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPD-KVIQVAC 288

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNF 458
           G  HT  + E +V             + +G G  G+LG G        P  +  + +   
Sbjct: 289 GGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKI 335

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF----VE 511
             +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L  NF    V+
Sbjct: 336 SHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPT-----LCSNFLKFTVQ 390

Query: 512 EIACGDYHVAVLTS 525
            IACG  H+ V  +
Sbjct: 391 LIACGGCHMLVFAT 404



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 18/188 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F+WG+             S    G+K  S V    E  V   +  I+CG  H+A VT
Sbjct: 197 GKLFMWGD------------NSEGQIGLKNKSNVCIPHEVTVGKPISWISCGYYHSAFVT 244

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
             GE++++GE   G+LG      ++H  P+ +  + +  ++ VACG  HT  +T    +Y
Sbjct: 245 TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLT-EKVVY 302

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +G     FG LG G  +      K+   ++   +S +SCG  HTA++T  G ++TFGDG
Sbjct: 303 AFGLG--QFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDG 360

Query: 368 TFGVLGHG 375
             G LG G
Sbjct: 361 RHGKLGLG 368



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 24/150 (16%)

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV---SCGHSLTVALT-TTGHVYTMGSP 483
           WG G  G+         L P  VA  V P   Q+   + G +   +L   TG V+T G  
Sbjct: 7   WGTGGLGQY--------LRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFTFGKT 58

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNFVEE-IACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            + +         +P++      KN V   ++CGD H A++T   ++Y +G    G+LG 
Sbjct: 59  KFAE--------NIPSKF---WFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGL 107

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           G     + P+ ++ALK ++VK   CG + T
Sbjct: 108 GSKSAISKPTCIKALKPEKVKLAACGRNHT 137


>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 150/315 (47%), Gaps = 22/315 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACG 293
           V NI+    HAA VT+ GEVF+ G+      GHG V   +  P  I ALK I+ + VA G
Sbjct: 157 VVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATG 216

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHT 352
              T  +T  G +YT G +    G LGHG+ +    PK +    EG+  V  V+ G  +T
Sbjct: 217 LSFTVILTTDGQVYTCGSNT--HGQLGHGDTIDRATPKIVE-LFEGLAPVVQVAAGASYT 273

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK--GLRTVRAACGVWHTAAVVEV 410
             VT  G +++FG  T   LGHGD+     PR + S K   +  VR + G  H  A+  +
Sbjct: 274 FAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDAL 333

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                       G ++TWG G  G LGHGD+  +  P  +++L      QV      T  
Sbjct: 334 ------------GYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFV 381

Query: 471 LTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           LT  G V+  G   +G LG P    ++  +  RV   L  ++V +I+ G YH   +T+R 
Sbjct: 382 LTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRG 441

Query: 528 EVYTWGKGANGRLGH 542
            V+ +G     +LG 
Sbjct: 442 IVFGFGDNERAQLGQ 456



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 155/350 (44%), Gaps = 39/350 (11%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVD-------SDVSHPKLIDALKNINVELVACGE 294
           GR+  L+     V+S G  L G LGHG D       S V  P L   +       ++   
Sbjct: 111 GRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVN------ISASH 164

Query: 295 HHTCAVTLSGDMYTWGGSN---CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           +H   VT  G+++T G ++   C  G +G     +++ P ++   L+GI    V+ G   
Sbjct: 165 NHAAFVTELGEVFTCGDNSSLCCGHGEVGR----TIFRPTEIKA-LKGISCKQVATGLSF 219

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR-TVRAACGVWHTAAVVEV 410
           T ++T+ GQ++T G  T G LGHGD I  +TP+ V+  +GL   V+ A G  +T AV + 
Sbjct: 220 TVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTD- 278

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF--CQVSCGHSLT 468
                       G ++++G      LGHGD+   L P  + +    N    +VS G    
Sbjct: 279 -----------DGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHA 327

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           VAL   G+VYT G    G LG    N K    +   L      ++        VLT    
Sbjct: 328 VALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGS 387

Query: 529 VYTWGKGANGRLG---HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           V+ +G    G LG    G +D    P ++++L+D  V  I  G   T A+
Sbjct: 388 VFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAV 437



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 138/285 (48%), Gaps = 24/285 (8%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCG 348
           VA G +HT  V  S  +Y+ G S C  G+LGHG + +         P   +  V ++S  
Sbjct: 108 VATGRYHTLLVHDSS-VYSCGSSLC--GVLGHGPDTTQCAAFS-RVPFPSLSRVVNISAS 163

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
             H A VT  G++FT GD +    GHG+   ++  P E+ +LKG+   + A G+  T  +
Sbjct: 164 HNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVIL 223

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGH 465
                        + G+++T G    G+LGHGD   R  P  V     + P   QV+ G 
Sbjct: 224 T------------TDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAP-VVQVAAGA 270

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNF-VEEIACGDYHVAVL 523
           S T A+T  G VY+ GS     LG    + +L P  ++    +N  V  ++ GD H   L
Sbjct: 271 SYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
            +   VYTWG+G  G LGHGD +D+  P L+ +LK  QV   VC 
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLK-SQVAVQVCA 374



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 159/356 (44%), Gaps = 40/356 (11%)

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGE----CTGDGILGGGIHRSGSYAGVKMDSFVP 224
           SLS  V+ S+  +       LG+VF  G+    C G G +G  I R             P
Sbjct: 153 SLSRVVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFR-------------P 199

Query: 225 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN 284
             +++   +  + +A G     ++T  G+V++ G    G+LGHG   D + PK+++  + 
Sbjct: 200 TEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEG 259

Query: 285 IN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEGIHV 342
           +  V  VA G  +T AVT  G +Y++G  +C    LGHG++     P+ +       IHV
Sbjct: 260 LAPVVQVAAGASYTFAVTDDGTVYSFG--SCTNFCLGHGDQHDELRPRAIQSFKRRNIHV 317

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
             VS G  H   + + G ++T+G G  G LGHGD    ++P  + SLK    V+      
Sbjct: 318 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKR 377

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK---EARLVPTCVAALVEPNFC 459
            T  + +             G +F +G    G LG  D+   +  + P  + +L +    
Sbjct: 378 KTFVLTD------------EGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVS 425

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA 514
           Q+S G   TVA+T  G V+  G     QLG     G L PT +   + +  +EEI 
Sbjct: 426 QISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEI---MFQKSMEEIV 478



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 108/237 (45%), Gaps = 28/237 (11%)

Query: 340 IHVSS----VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRT 394
           +H SS    V+ G +HT +V  +  +++ G    GVLGHG D    +    V      R 
Sbjct: 99  VHTSSGNMQVATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRV 157

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAAL 453
           V  +    H A V E+            G++FT GD      GHG+    +  PT + AL
Sbjct: 158 VNISASHNHAAFVTEL------------GEVFTCGDNSSLCCGHGEVGRTIFRPTEIKAL 205

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF---- 509
              +  QV+ G S TV LTT G VYT GS  +GQLG    +G    R   K+ + F    
Sbjct: 206 KGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLG----HGDTIDRATPKIVELFEGLA 261

Query: 510 -VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
            V ++A G  +   +T    VY++G   N  LGHGD  D   P  +++ K + +  +
Sbjct: 262 PVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVV 318


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 174/349 (49%), Gaps = 30/349 (8%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           +++   A G  H+ L+     V+S G+   G+LG   D     P+ I AL +++V+LV+C
Sbjct: 22  IELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSC 81

Query: 293 GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           G+ H+ AV   G ++ WG GS    G +G   E+S ++P K+   L GI +  VSCG +H
Sbjct: 82  GKEHSVAVCHKGKVFAWGAGSEGQLG-IGEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYH 138

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +  ++  G +F++G  + G LG G +  S + P++V SL+G+   + A G  H+ A+   
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL--S 196

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
           + G+S          F WG    G+L   G+  KE    P  + AL   +   +SCG+  
Sbjct: 197 LTGTS----------FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEH 246

Query: 468 TVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTS 525
           T  LT  G V+T G    GQL   P++  + P  +EG      V +I C  YH +A + +
Sbjct: 247 TAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG--IGGRVSQIECASYHTIAYVYT 304

Query: 526 RTEVYTWGKG----ANGRLGHGDTDDRNFPSLV--EALKDKQVKSIVCG 568
             +V + G+G    +N        ++ +   L+  E L D +VK I  G
Sbjct: 305 TGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAG 353



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 120/252 (47%), Gaps = 19/252 (7%)

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           P++L     GI +   + G  H+ ++ S  ++++ GD ++G LG     S   P  + +L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPT 448
             L     +CG  H+ AV            C  GK+F WG G  G+LG G+ KE   +PT
Sbjct: 72  NDLHVDLVSCGKEHSVAV------------CHKGKVFAWGAGSEGQLGIGEFKEISFMPT 119

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLT 506
            + AL      QVSCGH  ++AL+  GHV++ G    GQLG  K   +  +P +V+  L 
Sbjct: 120 KIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK-SLE 178

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVK 563
              + ++A G  H   L+     + WG   +G+L   G+   +    P  + ALK+  V 
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238

Query: 564 SIVCGTSFTAAI 575
            I CG   TA +
Sbjct: 239 YISCGYEHTAVL 250



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 22/264 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDAL 282
           P+ +++   L V  ++CG  H+  V  +G+VF+WG    G+LG G   ++S  P  I AL
Sbjct: 65  PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIH 341
             I +  V+CG +H+ A++  G +++WG +  + G LG G N  S  +P+K+   LEGI 
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRN--SEGQLGLGKNSRSQAIPQKVK-SLEGIP 181

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           ++ V+ G  H+  ++  G  F +G    G   + G+  +  +  P  + +LK L  +  +
Sbjct: 182 LAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYIS 241

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HTA + E             G++FT+G    G+L    +  +  P  +   +    
Sbjct: 242 CGYEHTAVLTE------------EGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG-IGGRV 288

Query: 459 CQVSCGHSLTVA-LTTTGHVYTMG 481
            Q+ C    T+A + TTG V ++G
Sbjct: 289 SQIECASYHTIAYVYTTGQVVSLG 312



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 115/221 (52%), Gaps = 13/221 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG  + +G LG G          K  SF+P  +++   + +  ++CG  H+  ++
Sbjct: 93  GKVFAWGAGS-EGQLGIG--------EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALS 143

Query: 250 KQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           + G VFSWG    G+LG G +S   + P+ + +L+ I +  VA G  H+ A++L+G  + 
Sbjct: 144 EDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG 203

Query: 309 WGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG +      L G+  +  ++ P  + G L+ + V  +SCG  HTAV+T  GQ+FTFG  
Sbjct: 204 WGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFGGN 262

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           + G L    R     P+ ++ + G R  +  C  +HT A V
Sbjct: 263 SSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYV 302



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 204 LGGGIHRSGSYA----GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
            G G +RSG  A     VK   + P ++ +   L V  I+CG  H A++T++G+VF++G 
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 261

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 310
              G+L     S    P+LI+ +    V  + C  +HT A V  +G + + G
Sbjct: 262 NSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLG 312



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
           A  + P R++   +   + + A G++H  +L S   VY+ G  + G+LG         P 
Sbjct: 7   AGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPE 66

Query: 553 LVEALKDKQVKSIVCGTSFTAAICLHK 579
            ++AL D  V  + CG   + A+C HK
Sbjct: 67  PIQALNDLHVDLVSCGKEHSVAVC-HK 92


>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Monodelphis domestica]
          Length = 1170

 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 166/345 (48%), Gaps = 41/345 (11%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H AL+T   +++ +G    G+LG G  + V+ P  + ALK   V++ ACG +HT
Sbjct: 40  LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVVT 356
              T  G +Y  GG++     LG   E + +   +L       H +  +S G   +A +T
Sbjct: 100 LVYTEEGKVYAAGGNSEGQLGLGDTEERTTF---QLVSFFTAQHKIKQLSAGSNTSAALT 156

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G LF +GD + G +G  +  +V  P EV   K +  +  +CG +H+A V         
Sbjct: 157 EDGVLFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISWI--SCGYYHSAFVT-------- 206

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEAR--LVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
               + G+L+T+G+ + G+LG   ++ +   +P  V   +     QV+CG   TVALT  
Sbjct: 207 ----TEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLG-IPGKVNQVACGGGHTVALTEE 261

Query: 475 GHVYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             VYT G   +GQLG         +PK        V   L    ++ IACG+ H A+++ 
Sbjct: 262 -EVYTFGLGQFGQLGLGTFIFETSEPK--------VVKHLQNQKIQYIACGENHTALISD 312

Query: 526 RTEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
              +YT+G G +G+LG G  +  N   P+L        V+ + CG
Sbjct: 313 TGHMYTFGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACG 357



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 162/338 (47%), Gaps = 33/338 (9%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G    LV   G VF++G+    +    + S          LKN     ++CG+ HT  +T
Sbjct: 2   GEPEELVPDSGAVFTFGK---SKFAENIPSKF-------WLKNDIPAYLSCGDEHTALIT 51

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
            +  +Y +G +  N+G LG G++ ++  P  +   L+   V   +CG  HT V T  G++
Sbjct: 52  GNSKLYMFGSN--NWGQLGLGSKTTVNKPTCVKA-LKPEKVKIAACGRNHTLVYTEEGKV 108

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +  G  + G LG GD    +T + V        ++      +T+A +             
Sbjct: 109 YAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNTSAAL-----------TE 157

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            G LF WGD   G++G  ++    VP+ V  + +P    +SCG+  +  +TT G +YT G
Sbjct: 158 DGVLFMWGDNSEGQIGLAEEANVCVPSEV-TIGKP-ISWISCGYYHSAFVTTEGELYTFG 215

Query: 482 SPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
            P  G+LG   +   N ++P  V G   K  V ++ACG  H   LT   EVYT+G G  G
Sbjct: 216 EPENGKLGLSPEQLKNHRIPQLVLGIPGK--VNQVACGGGHTVALTEE-EVYTFGLGQFG 272

Query: 539 RLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG G    + + P +V+ L++++++ I CG + TA I
Sbjct: 273 QLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALI 310



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T++G+V++ G    G+LG G   + +  +L+    
Sbjct: 78  PTCVKALKPEKVKIAACGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFT 137

Query: 284 -NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
               ++ ++ G + + A+T  G ++ WG +  + G +G   E ++ +P ++     G  +
Sbjct: 138 AQHKIKQLSAGSNTSAALTEDGVLFMWGDN--SEGQIGLAEEANVCVPSEVTI---GKPI 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG------HGDRISVSTPREVDSLKGLRTVR 396
           S +SCG +H+A VT+ G+L+TFG+   G LG         RI    P+ V  + G +  +
Sbjct: 193 SWISCGYYHSAFVTTEGELYTFGEPENGKLGLSPEQLKNHRI----PQLVLGIPG-KVNQ 247

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVE 455
            ACG  HT A+ E  V             +T+G G  G+LG G        P  V  L  
Sbjct: 248 VACGGGHTVALTEEEV-------------YTFGLGQFGQLGLGTFIFETSEPKVVKHLQN 294

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEE 512
                ++CG + T  ++ TGH+YT G   +G+LG   +   N  +PT     L K  V  
Sbjct: 295 QKIQYIACGENHTALISDTGHMYTFGDGRHGKLGLGQENFTNQFVPTLCSNFL-KFIVRL 353

Query: 513 IACGDYHVAVL 523
           +ACG  H+ V 
Sbjct: 354 VACGGCHMLVF 364



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 6/179 (3%)

Query: 199 TGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 258
           T DG+L      S    G+  ++ V    E  +   +  I+CG  H+A VT +GE++++G
Sbjct: 156 TEDGVLFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISWISCGYYHSAFVTTEGELYTFG 215

Query: 259 EELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 316
           E   G+LG   +   +H  P+L+  +    V  VACG  HT A+T   ++YT+G     F
Sbjct: 216 EPENGKLGLSPEQLKNHRIPQLVLGIPG-KVNQVACGGGHTVALT-EEEVYTFGLG--QF 271

Query: 317 GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           G LG G  +      K+   L+   +  ++CG  HTA+++  G ++TFGDG  G LG G
Sbjct: 272 GQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGRHGKLGLG 330



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 7/98 (7%)

Query: 212 GSYAGVKMDSFVPKAVESAVVLDVQN-----IACGGRHAALVTKQGEVFSWGEELGGRLG 266
           G +  + + +F+ +  E  VV  +QN     IACG  H AL++  G ++++G+   G+LG
Sbjct: 269 GQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGRHGKLG 328

Query: 267 HGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTL 302
            G ++  +   P L        V LVACG  H     +
Sbjct: 329 LGQENFTNQFVPTLCSNFLKFIVRLVACGGCHMLVFAI 366


>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
 gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
          Length = 646

 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 159/321 (49%), Gaps = 44/321 (13%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPK--LIDALKN-INVELVACGEHHTCAVTLS-GDMY 307
           G V++WG    G+ G   +  +  P   L   + N I ++ +ACG+ H+ A+      +Y
Sbjct: 97  GLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGVY 156

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH------VSSVSCGPWHTAVVTSAGQL 361
           +WG +   +G LGHG++++   P  L+    G         S V+CG  H+ +V++ G+L
Sbjct: 157 SWGVNR--WGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGEL 214

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +TFG GT G LGHGD      P  V SL G   V  A GV H++ V             S
Sbjct: 215 YTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCVD------------S 262

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPT----------------CVAALVEPNFCQVSCGH 465
           +GK+++WG    G+LG+G  +++ +PT                    L++ NF +V CG 
Sbjct: 263 NGKIYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGK 322

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLT 524
           + T+AL+++G V   G    GQLG+     +L P ++E       V +IA G YH   LT
Sbjct: 323 NHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVKIE---FNEHVIDIASGYYHSLCLT 379

Query: 525 SRTEVYTWGKGANGRLGHGDT 545
              E Y+WG  ++G LG G+ 
Sbjct: 380 DNGEAYSWGYMSDGSLGLGEV 400



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 154/341 (45%), Gaps = 51/341 (14%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           +ACG +H+ +V+  GE++++G    GRLGHG +     P  + +L   ++  VA G  H+
Sbjct: 198 VACGSQHSMIVSNYGELYTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHS 257

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK--KLNGP-------------LEGIHV 342
             V  +G +Y+WG +   +G LG+G+  S  LP   K   P             L  ++ 
Sbjct: 258 SCVDSNGKIYSWGWN--RYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNF 315

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
             V CG  HT  ++S+G++  FG    G LG+G+ +    P +++  +    +  A G +
Sbjct: 316 IKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVKIEFNE--HVIDIASGYY 373

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
           H+  + +            +G+ ++WG    G LG G+         +  LV    C   
Sbjct: 374 HSLCLTD------------NGEAYSWGYMSDGSLGLGEVYTHQTKPKLIPLVHIRHC--- 418

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF-----VEEIACGD 517
                    T +   +   + +YG+  D     +   + +  L+K +     V+ I+ G 
Sbjct: 419 --------FTDSNDAF---NEIYGRQ-DENTTQETIDQHKLYLSKKYSVGDTVDMISAGA 466

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
           ++ A++TS  +++ +G G   R G+    D++ P +VE  K
Sbjct: 467 WNSAIITSSGKLFCFGFGDTYRNGNQSEFDQDMPIIVEPTK 507



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 21/188 (11%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSD-------V 273
           F P  V S V   + ++A G  H++ V   G+++SWG    G+LG+G V S         
Sbjct: 234 FKPTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRYGQLGNGSVKSQTLPTPPKF 293

Query: 274 SHPKLIDA--------LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 325
            +PKL D         L  +N   V CG++HT A++ SG++  +G + C  G LG+GN M
Sbjct: 294 QNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVVGFGFNAC--GQLGNGNHM 351

Query: 326 SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPRE 385
               P K+       HV  ++ G +H+  +T  G+ +++G  + G LG G+  +  T  +
Sbjct: 352 DQLYPVKIE---FNEHVIDIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGEVYTHQTKPK 408

Query: 386 VDSLKGLR 393
           +  L  +R
Sbjct: 409 LIPLVHIR 416



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 27/208 (12%)

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREV-----DSLKGLRTVRAACGVWHTAAVVEVMV 412
            G ++ +G   FG  G     ++  P  +     D+   ++ +  ACG  H+ A+ E   
Sbjct: 96  GGLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQI--ACGDSHSLAIAEQPY 153

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN-------FCQVSCGH 465
           G           +++WG    G+LGHGD+  R  PT ++ +   +       F  V+CG 
Sbjct: 154 G-----------VYSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGS 202

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLT 524
             ++ ++  G +YT G    G+LG      K  PT V   + K+ V  +A G  H + + 
Sbjct: 203 QHSMIVSNYGELYTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVS-VAAGVMHSSCVD 261

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPS 552
           S  ++Y+WG    G+LG+G    +  P+
Sbjct: 262 SNGKIYSWGWNRYGQLGNGSVKSQTLPT 289


>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
           porcellus]
          Length = 1016

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 168/345 (48%), Gaps = 32/345 (9%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RHA L+     V + G+  GG+LG         P+ I AL N+ V+LV+CG+ H+ 
Sbjct: 35  ASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSL 94

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           AV   G ++ WG GS+   G LG G  E   ++P+K+   L GI +  +SCG +H+  ++
Sbjct: 95  AVCHKGKVFAWGVGSD---GQLGTGKFEEICFIPQKIKA-LTGIKIIQISCGYYHSLALS 150

Query: 357 SAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
             GQ+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+        
Sbjct: 151 KDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-------- 202

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALT 472
                 SG  F WG+   G+L        +    P  V AL       +SCG+  T  LT
Sbjct: 203 ----SLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLT 258

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVY 530
               V+T G   +GQLG    +    P  VEG      V +I CG YH +A + +  +V 
Sbjct: 259 QNDQVFTFGDNSFGQLGHNGVSQTTGPQLVEG--IGGPVSQIDCGSYHTLAYVYTTGQVV 316

Query: 531 TWGK----GANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGT 569
           ++G+     +N       +++ +   L+ A  L+D Q+K I  GT
Sbjct: 317 SFGREPSHTSNPTHPETPSENSDISCLISADDLRDIQIKHIFAGT 361


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 162/380 (42%), Gaps = 73/380 (19%)

Query: 234 DVQNIACGGRH--AALVTKQGE-VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV 290
           +V  +ACG  H  A + T  G  V SWG    G+LGHG   D   P+ + +L +     V
Sbjct: 8   EVIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSV 67

Query: 291 ACGEHHTCAVTLSGD--MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            CG  ++ AV   GD  +Y+WG  +  FG LG G+   +++P  L   L G  V+SV+CG
Sbjct: 68  HCGAEYSMAVA-GGDKQVYSWGWGD--FGRLGTGDVKDVFIPCPLP-ALAGRRVASVACG 123

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             HT V T+ GQLF FG    G  G G       P+ V +L+G   V  ACG  H+  V 
Sbjct: 124 DTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVT 183

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                       S G+++ WG G  G +G G+ + R +PT    L      QV+CG   +
Sbjct: 184 ------------SEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHS 231

Query: 469 VALTTTGHVYTMGSPVYGQL--GDPKANGKLPTRVEG----------------------- 503
           +A+   G +YT G   Y QL  GD K +  +P RVE                        
Sbjct: 232 IAVDEGGAMYTWGWGAYAQLMQGDRKDH-YVPKRVEAVQQVATVAGGWRHTMAADSQGRL 290

Query: 504 --------------------------KLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
                                      L    V ++  G  H   +T   + ++WG+  N
Sbjct: 291 FASGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVN 350

Query: 538 GRLGHGDTDDRNFPSLVEAL 557
           G+LGH    D N P  + AL
Sbjct: 351 GQLGHSGMQDSNSPVELAAL 370



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 131/270 (48%), Gaps = 17/270 (6%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D F+P  + +     V ++ACG  H  + T +G++F++G    G+ G G   D   P+L+
Sbjct: 102 DVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLV 161

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            AL+   V  VACG  H+  VT  G++Y WG     +G +G G      LP    G LEG
Sbjct: 162 TALQGKEVVAVACGAEHSMCVTSEGEVYCWGWG--RYGNIGDGESQDRHLPTLAKG-LEG 218

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           + V+ V+CG  H+  V   G ++T+G G +  L  GDR     P+ V++++ + TV  A 
Sbjct: 219 VKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEAVQQVATV--AG 276

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           G  HT A              S G+LF  G    G+ G G  E  +    V AL      
Sbjct: 277 GWRHTMAAD------------SQGRLFASGWNKFGQCGVGHNEDVVRVQQVEALAGERVV 324

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           QV  G   T+A+T TG  ++ G  V GQLG
Sbjct: 325 QVKSGWKHTMAVTHTGKFFSWGRNVNGQLG 354



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 134/290 (46%), Gaps = 23/290 (7%)

Query: 290 VACGEHHTCAV--TLSGDM-YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           +ACG  H+ A+  T SG M  +WG      G LGHG+      P+ +   L     +SV 
Sbjct: 12  LACGSSHSLALISTPSGSMVLSWG--RGEDGQLGHGDAEDRQEPQAVFSLLH-RGATSVH 68

Query: 347 CGP-WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 405
           CG  +  AV     Q++++G G FG LG GD   V  P  + +L G R    ACG  HT 
Sbjct: 69  CGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTL 128

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
                          + G+LF +G    G+ G G  +  L P  V AL       V+CG 
Sbjct: 129 VAT------------AEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGA 176

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLT 524
             ++ +T+ G VY  G   YG +GD ++  + LPT  +G L    V ++ CG  H   + 
Sbjct: 177 EHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKG-LEGVKVAQVNCGWRHSIAVD 235

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               +YTWG GA  +L  GD  D   P  VEA+  +QV ++  G   T A
Sbjct: 236 EGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEAV--QQVATVAGGWRHTMA 283



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 18/259 (6%)

Query: 342 VSSVSCGPWHTAVVTS---AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           V  ++CG  H+  + S      + ++G G  G LGHGD      P+ V SL         
Sbjct: 9   VIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVH 68

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  ++ AV                ++++WG GD GRLG GD +   +P  + AL     
Sbjct: 69  CGAEYSMAVAG-----------GDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRV 117

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
             V+CG + T+  T  G ++  G    GQ G       L  ++   L    V  +ACG  
Sbjct: 118 ASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAE 177

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI--- 575
           H   +TS  EVY WG G  G +G G++ DR+ P+L + L+  +V  + CG   + A+   
Sbjct: 178 HSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEG 237

Query: 576 -CLHKWVSGVDQSMCSGCR 593
             ++ W  G    +  G R
Sbjct: 238 GAMYTWGWGAYAQLMQGDR 256


>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 456

 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 189/398 (47%), Gaps = 40/398 (10%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVK--MDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           V+ WG    +G LG   H S   +G++   +   PK  E+     + ++  G  H+A + 
Sbjct: 71  VYTWG----NGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAID 126

Query: 250 KQGEVFSWGEELGGRLGHGVDSDV-SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           ++G+++ WG     +LG G  S++ + P+ ++ALK I +  V+CG++ T AV   G MY+
Sbjct: 127 EEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMYS 186

Query: 309 WG--GSNCNFGLLGHGNEMSLWLPKKLNGPL--EGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           WG  GS                   +L   L  +G+ +++V CG +HT  +T  G+++ +
Sbjct: 187 WGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWAW 246

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G+G +G LG+G+  +   P  ++       V  A G   + A+ +             G+
Sbjct: 247 GNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTD------------KGE 294

Query: 425 LFTWGDGDRGRLGHGDKEA------RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
           L++WG   + +LG G   A        +P  V A       Q++ G+    A+T  G +Y
Sbjct: 295 LYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLY 354

Query: 479 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
             G+ ++ +   P    ++    E K+T     ++ACG  +   LT   +V+T+GKG++ 
Sbjct: 355 MWGAKIWIE---PH---EMTAVNEHKMT-----QVACGRQYTVGLTDDGKVFTFGKGSSN 403

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
            LGHGD  ++  P  ++AL    + S+ CG     AI 
Sbjct: 404 CLGHGDRKNQLQPVKIQALAGVNITSVSCGDYHMGAIA 441



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 26/242 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           +  + CG  H   +TK GE+++WG    GRLG+G       P+ I+     NV  +A G 
Sbjct: 224 IATVECGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGR 283

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE---GIHVSSVSCGPWH 351
             + A+T  G++Y+WGG++ N   +G G  M ++  + +   +E   G+ V  ++ G  H
Sbjct: 284 DFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDH 343

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            A VT  G+L+ +          G +I +  P E+ ++   +  + ACG  +T  + +  
Sbjct: 344 AAAVTEDGRLYMW----------GAKIWIE-PHEMTAVNEHKMTQVACGRQYTVGLTD-- 390

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                      GK+FT+G G    LGHGD++ +L P  + AL   N   VSCG     A+
Sbjct: 391 ----------DGKVFTFGKGSSNCLGHGDRKNQLQPVKIQALAGVNITSVSCGDYHMGAI 440

Query: 472 TT 473
            T
Sbjct: 441 AT 442



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 107/252 (42%), Gaps = 38/252 (15%)

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVS--------TPREVDSLKGLRTVRAACGVWH 403
           TA   +   ++T+G+GT G LGHG  I           TP+  ++L+G        G  H
Sbjct: 62  TASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASH 121

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVS 462
           +AA+ E             GKL+ WG  +  +LG G+  E   +P  V AL       VS
Sbjct: 122 SAAIDE------------EGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVS 169

Query: 463 CGHSLTVALTTTGHVYTMG----------SPVYGQLGDPKANGKLPTRVEGKLTKNFVEE 512
           CG   T A+   G +Y+ G             +    D      L T V+  +    VE 
Sbjct: 170 CGDYFTAAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVE- 228

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
             CG++H   LT   E++ WG G  GRLG+G++D    P  +E      V SI  G  F+
Sbjct: 229 --CGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFS 286

Query: 573 AAIC----LHKW 580
            A+     L+ W
Sbjct: 287 FALTDKGELYSW 298


>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60470703|gb|EAL68677.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 849

 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 188/424 (44%), Gaps = 63/424 (14%)

Query: 189 LGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV--PKAVESAVVLDVQNIACGGRHAA 246
            GDV+ WG  + +G LG G      Y G     FV  P  ++S     +  +ACG  H+ 
Sbjct: 52  FGDVYSWGR-SKEGQLGIG----QGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSL 106

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT--LSG 304
            +T  G+V+ WG+       H +D   S   +      I +  ++       +V+  LSG
Sbjct: 107 ALTDMGKVYEWGQL------HRLDESQSSLDIQSTNGLIEMPRLSSQRIIEASVSQYLSG 160

Query: 305 DMYTW---GGS---------------NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           +   +   GG+                     LG   +++  +P ++    E   V  VS
Sbjct: 161 EKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPE--EVVDVS 218

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            G   +A VT +G+L+T+G    G LG G+R   STP+ V +L  +  V   CG  H  A
Sbjct: 219 GGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICA 278

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN--FCQVSCG 464
           + +             G++++WG G  G+LGHG+ ++ L P  +   VE N    QV+CG
Sbjct: 279 ITD------------QGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACG 326

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLG-------------DPKANGKLPTRVEGKLTKNFVE 511
            + T+  +  G +Y  G   YGQLG             D      +P  V+   TK  ++
Sbjct: 327 SNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKK-IK 385

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            +ACG  H  V+T   EVY WG G++G LG G+   +  P L+ +L  +++ SI  G   
Sbjct: 386 NVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQLITSLSGEEIASITAGEKH 445

Query: 572 TAAI 575
           T  +
Sbjct: 446 TIVV 449



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 151/326 (46%), Gaps = 33/326 (10%)

Query: 217 VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
           + ++  +P  ++  +  +V +++ G   +A VTK G +++WG    G+LG G     S P
Sbjct: 197 IDLNQTIPMQIQD-IPEEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTP 255

Query: 277 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
           +L+  L ++N+  V CG  H CA+T  G++Y+WG     FG LGHGN  S   PKK+   
Sbjct: 256 QLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLG--VFGQLGHGNVKSYLHPKKIQQF 313

Query: 337 LE-GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG------HGD------RISVSTP 383
           +E    ++ V+CG   T V +  G L+ FG G +G LG      H D          S P
Sbjct: 314 VELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIP 373

Query: 384 REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA 443
             V SL+  +    ACG  HT  V +              +++ WG G  G LG G+K  
Sbjct: 374 IVVKSLETKKIKNVACGHLHTIVVTD------------ENEVYQWGWGSSGALGLGNKRF 421

Query: 444 RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEG 503
           +LVP  + +L       ++ G   T+ +  +    T  +  Y  L + K    L  +V+ 
Sbjct: 422 QLVPQLITSLSGEEIASITAGEKHTIVVRCSD--VTSFAYDYKSLINEKKYADLIFKVQD 479

Query: 504 KLTKN---FVEEIACGDYHVAVLTSR 526
           K   +   F++      Y + + +SR
Sbjct: 480 KKIYSHSLFIKSRCQKLYSIILFSSR 505



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 152/341 (44%), Gaps = 31/341 (9%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V S G+   G+LGH    +   P +I+ L    +     GE H+ AV+  GD+Y+WG S 
Sbjct: 3   VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSK 62

Query: 314 CNFGLLGHGN-----EMSLWLPK-KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
              G LG G      +  +++ K  L   L+   +  V+CG +H+  +T  G+++ +G  
Sbjct: 63  E--GQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWGQ- 119

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTV-RAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
               L   D    S   ++ S  GL  + R +      A+V + + G   + + + G   
Sbjct: 120 ----LHRLDESQSSL--DIQSTNGLIEMPRLSSQRIIEASVSQYLSGEKKAYDANGGTKP 173

Query: 427 TWGDGDR----------GRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
              D D+            LG      + +P  +  + E     VS G + + A+T +G 
Sbjct: 174 KDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPEE-VVDVSGGWAFSAAVTKSGR 232

Query: 477 VYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +YT G    GQLG   +     P  V+  +  N V  + CG  H+  +T + EVY+WG G
Sbjct: 233 LYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIV-SVVCGRQHICAITDQGEVYSWGLG 291

Query: 536 ANGRLGHGDTDDRNFPSLVEALKD--KQVKSIVCGTSFTAA 574
             G+LGHG+      P  ++   +  +++  + CG++FT  
Sbjct: 292 VFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMV 332



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV---DSD----VSHP 276
           P  +E  +   +     G  H+  V++ G+V+SWG    G+LG G     SD    V+ P
Sbjct: 25  PTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKP 84

Query: 277 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            LI +L++  +  VACG  H+ A+T  G +Y WG
Sbjct: 85  TLIKSLQHERIIKVACGNFHSLALTDMGKVYEWG 118



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 9/107 (8%)

Query: 477 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           V ++G    GQLG       L PT +EG L K  ++ ++ G+ H   ++   +VY+WG+ 
Sbjct: 3   VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVS-GEAHSLAVSRFGDVYSWGRS 61

Query: 536 ANGRLG----HGDTDDRNF---PSLVEALKDKQVKSIVCGTSFTAAI 575
             G+LG    +G +D   F   P+L+++L+ +++  + CG   + A+
Sbjct: 62  KEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLAL 108


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 141/278 (50%), Gaps = 23/278 (8%)

Query: 307 YTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           +T G  N N G LG G   +  + +P+ +   LEGI V  ++ G  HT V+TS G++ + 
Sbjct: 17  WTLGFGNTNSGELGLGGIEDHIVRVPRSI-PQLEGIRVRQIATGAHHTLVLTSHGRVLSC 75

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G      LG    +S + P  V +L+ LR V+  CG  H+ A+ E            +G+
Sbjct: 76  GSNDHDQLGQ--EVSTTKPEPVTALQCLRIVQVCCGQQHSMALTE------------AGQ 121

Query: 425 LFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           ++ WG   +G+LG+G+ +E+RL P  V  L      Q++CG +  +AL   G +Y  G  
Sbjct: 122 VYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDN 181

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNF---VEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
             GQLG        P RV  ++T      + +IACG  H  VL+    ++ WG    G+L
Sbjct: 182 GNGQLGIGTVGE--PQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQL 239

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
           G  D  DR FP+L++ L+ + VK I  G + +AA+  H
Sbjct: 240 GLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAH 277



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 159/365 (43%), Gaps = 66/365 (18%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           VP+++     + V+ IA G  H  ++T  G V S G     +LG  V +  + P+ + AL
Sbjct: 41  VPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVST--TKPEPVTAL 98

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + +  V CG+ H+ A+T +G +Y WG SN   G LG+G      L  +    L    V
Sbjct: 99  QCLRIVQVCCGQQHSMALTEAGQVYMWG-SNSK-GQLGNGEGQESRLSPRFVKTLAPFTV 156

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR----EVDSLKGLRTVRAA 398
             ++CG  H   + + G L+ +GD   G LG G   +V  P+    EV +L GL   + A
Sbjct: 157 VQIACGSNHCLALLNNGALYAWGDNGNGQLGIG---TVGEPQRVPVEVTNLLGLPLSQIA 213

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  H+  +              SG +F WG    G+LG  D + R  PT +  L + + 
Sbjct: 214 CGANHSMVL------------SKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHV 261

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPV---------------------------------- 484
             ++ G + + ALT  G V+T G                                     
Sbjct: 262 KFIAAGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFC 321

Query: 485 ------YGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGA 536
                 YGQLG    N +L P +++ +L    + +IA G  H V    +  +V+T+G G 
Sbjct: 322 RHSYGSYGQLGHGSKNDQLTPMKIQ-ELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGG 380

Query: 537 NGRLG 541
           NG+LG
Sbjct: 381 NGQLG 385



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 165/378 (43%), Gaps = 63/378 (16%)

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTC 298
           G R  +    Q     +G    G LG G   D  V  P+ I  L+ I V  +A G HHT 
Sbjct: 5   GSRSRSRQRAQNWTLGFGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTL 64

Query: 299 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            +T  G + + G ++ +      G E+S   P+ +   L+ + +  V CG  H+  +T A
Sbjct: 65  VLTSHGRVLSCGSNDHD----QLGQEVSTTKPEPVTA-LQCLRIVQVCCGQQHSMALTEA 119

Query: 359 GQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           GQ++ +G  + G LG+G+ + S  +PR V +L     V+ ACG  H  A++         
Sbjct: 120 GQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALL--------- 170

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
              ++G L+ WGD   G+LG G   E + VP  V  L+     Q++CG + ++ L+ +G 
Sbjct: 171 ---NNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGV 227

Query: 477 VYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG-- 533
           ++  GS  +GQLG     +   PT ++  L +  V+ IA G  H A LT+   V+T+G  
Sbjct: 228 IFVWGSNRFGQLGLSDNKDRAFPTLLK-TLRQQHVKFIAAGGAHSAALTAHGGVFTFGWS 286

Query: 534 --------------------------------------KGANGRLGHGDTDDRNFPSLVE 555
                                                  G+ G+LGHG  +D+  P  ++
Sbjct: 287 FYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMKIQ 346

Query: 556 ALKDKQVKSIVCGTSFTA 573
            L    +  I  G   T 
Sbjct: 347 ELMGTTITQIALGRCHTV 364



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 151/322 (46%), Gaps = 44/322 (13%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGH--GVDSDVSHPKLIDA 281
           P+ V +   L +  + CG +H+  +T+ G+V+ WG    G+LG+  G +S +S P+ +  
Sbjct: 92  PEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLS-PRFVKT 150

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE--- 338
           L    V  +ACG +H  A+  +G +Y W G N N G LG G   ++  P+++  P+E   
Sbjct: 151 LAPFTVVQIACGSNHCLALLNNGALYAW-GDNGN-GQLGIG---TVGEPQRV--PVEVTN 203

Query: 339 --GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
             G+ +S ++CG  H+ V++ +G +F +G   FG LG  D    + P  + +L+      
Sbjct: 204 LLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKF 263

Query: 397 AACGVWHTAAVV----------------EVMVG----SSSSSNCSSGKLFTWGD------ 430
            A G  H+AA+                 EV +      S+  +  + KLF+  +      
Sbjct: 264 IAAGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRH 323

Query: 431 --GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT-TTGHVYTMGSPVYGQ 487
             G  G+LGHG K  +L P  +  L+     Q++ G   TV    T G V+T G    GQ
Sbjct: 324 SYGSYGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQ 383

Query: 488 LGDPKANGKLPTRVEGKLTKNF 509
           LG   +    PT + G   K+ 
Sbjct: 384 LGSSVSMVSTPTPLAGNWGKSL 405



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 51/256 (19%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G ++ WG+  G+G LG G         V     VP  V + + L +  IACG  H+ +++
Sbjct: 173 GALYAWGD-NGNGQLGIGT--------VGEPQRVPVEVTNLLGLPLSQIACGANHSMVLS 223

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           K G +F WG    G+LG   + D + P L+  L+  +V+ +A G  H+ A+T  G ++T+
Sbjct: 224 KSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTF 283

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD--- 366
           G S          +E+ + L    + P   +                 A +LF+  +   
Sbjct: 284 GWS------FYESHEVRISLRGTESNPQSAL-----------------ARKLFSLIEREF 320

Query: 367 -----GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
                G++G LGHG +    TP ++  L G    + A G  HT      +          
Sbjct: 321 CRHSYGSYGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTV---------- 370

Query: 422 SGKLFTWGDGDRGRLG 437
            GK+FT+G G  G+LG
Sbjct: 371 -GKVFTFGLGGNGQLG 385


>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 445

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 161/350 (46%), Gaps = 44/350 (12%)

Query: 253 EVFSWGEELGGRLGHGVD---------------SDVSH-----PKLIDALKNINVELVAC 292
           ++FSWG    G+LG G++               SD S      P  IDA  +     ++C
Sbjct: 49  QLFSWGRGASGQLGGGIEEIRMYPSPVANLLLRSDQSFSLAQTPGRIDAESSSFPIGISC 108

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G  H+  +T+ GD++ WG  +   G LG G E S+++P  LN   E   +  ++ G  H+
Sbjct: 109 GLFHS-GLTIDGDLWIWGKGDG--GRLGFGQENSVFVPN-LNPLFEEHSIRCIALGGLHS 164

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  G +FT+G G FG LGH        PR VD     +    A    HTAA+ E   
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRCVDGSWDCKISAIATSGTHTAAITE--- 221

Query: 413 GSSSSSNCSSGKLFTWG--DGDRGRLGH-----GDKEARLVPTCVAALVEPNFCQVSCGH 465
                    SG+L+ WG  +GD            +     VP+ V AL  P    VSCG 
Sbjct: 222 ---------SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-VASVSCGG 271

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             T+ALT  G ++  G+    +LG     G         L    + +IACG YH   LT 
Sbjct: 272 FFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPLPVPSLDSVRITQIACGGYHSLALTK 331

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             +V +WG G +G+LG+    ++  P+ +EAL DK++  I CG S +AAI
Sbjct: 332 EGKVLSWGHGGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAAI 381



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 162/356 (45%), Gaps = 48/356 (13%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GD++IWG+  G G LG G   S          FVP          ++ IA GG H+  +T
Sbjct: 119 GDLWIWGKGDG-GRLGFGQENS---------VFVPNLNPLFEEHSIRCIALGGLHSVALT 168

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            QG+VF+WG    G LGH V +    P+ +D   +  +  +A    HT A+T SG++Y W
Sbjct: 169 HQGDVFTWGYGGFGALGHKVYTRELVPRCVDGSWDCKISAIATSGTHTAAITESGELYMW 228

Query: 310 GGSNCN-------FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           G    +             G  +S  +P K+      + V+SVSCG + T  +T  GQL+
Sbjct: 229 GREEGDGRLGLGPGRGPNEGGGLS--VPSKVKALT--VPVASVSCGGFFTMALTKEGQLW 284

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
            +G  +   LG GD +    P  V SL  +R  + ACG +H+ A+ +             
Sbjct: 285 NWGANSNYELGRGDNLGGWEPLPVPSLDSVRITQIACGGYHSLALTK------------E 332

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           GK+ +WG G  G+LG+     + +PT + AL +     ++CG S + A+T  G ++  G+
Sbjct: 333 GKVLSWGHGGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGN 392

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFVEE-----------IACGDYHVAVLTSRT 527
               QLG P     LP      +  NF+ E           ++ G  H   L SR+
Sbjct: 393 AKDFQLGVP----GLPEIQTTPVEVNFLTEEDERQPHKVISVSIGASHALCLVSRS 444



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 169/355 (47%), Gaps = 35/355 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+CG  H+ L T  G+++ WG+  GGRLG G ++ V  P L    +  ++  +A G  H+
Sbjct: 106 ISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 164

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+T  GD++TWG     FG LGH       +P+ ++G  +   +S+++    HTA +T 
Sbjct: 165 VALTHQGDVFTWG--YGGFGALGHKVYTRELVPRCVDGSWD-CKISAIATSGTHTAAITE 221

Query: 358 AGQLFTFG-------DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +G+L+ +G        G     G  +   +S P +V +L  +     +CG + T A+ + 
Sbjct: 222 SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK- 279

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                       G+L+ WG      LG GD      P  V +L      Q++CG   ++A
Sbjct: 280 -----------EGQLWNWGANSNYELGRGDNLGGWEPLPVPSLDSVRITQIACGGYHSLA 328

Query: 471 LTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           LT  G V + G   +GQLG+    N K+PT +E    K  V  IACG    A +T   E+
Sbjct: 329 LTKEGKVLSWGHGGHGQLGNSSLRNQKIPTEIEALADKKIV-FIACGGSSSAAITDGGEL 387

Query: 530 YTWGKGANGRLG-HGDTDDRNFPSLVEALKDK------QVKSIVCGTSFTAAICL 577
           + WG   + +LG  G  + +  P  V  L ++      +V S+  G S   A+CL
Sbjct: 388 WMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDERQPHKVISVSIGASH--ALCL 440


>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
          Length = 1009

 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 125/215 (58%), Gaps = 15/215 (6%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVAC 292
           ++  I CG  H+  ++K GE+F+WG+ L G+LG G + +  S P++++ L  + +  ++ 
Sbjct: 123 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 182

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           GE H+ A+++SG++Y+WG ++C  G LG G+  +   P  +   L+   V  ++CG  HT
Sbjct: 183 GEAHSMALSMSGNVYSWGRNDC--GQLGLGHTYNKDSPSCIE-TLDDQKVEFLACGGCHT 239

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           A++T +G +FTFGDG +G LGH    +   PR V  L G R  + ACG  HT A V    
Sbjct: 240 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVS--- 296

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                    +GK+F++G G  G+LG+G    +L+P
Sbjct: 297 --------DTGKVFSFGSGKEGQLGNGGTRNQLIP 323



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 31/279 (11%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK I   K + +  +  GE H   ++  G  + +  S      + H          +   
Sbjct: 73  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS------IEHA---------RFQC 117

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLR 393
            L+  ++  ++CG +H+  ++  G+LF +G    G LG G RI  S STP  V++L G+ 
Sbjct: 118 ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTPEIVENLSGVP 176

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
            V+ + G  H+ A+              SG +++WG  D G+LG G    +  P+C+  L
Sbjct: 177 LVQISAGEAHSMAL------------SMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETL 224

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
            +     ++CG   T  LT +G V+T G   YGQLG      +L  R+   L  N V +I
Sbjct: 225 DDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQI 284

Query: 514 ACGDYHVAVLTSRT-EVYTWGKGANGRLGHGDTDDRNFP 551
           ACG  H     S T +V+++G G  G+LG+G T ++  P
Sbjct: 285 ACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 323



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 140/299 (46%), Gaps = 34/299 (11%)

Query: 205 GGGIHR--SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG 262
           G G H+  +GS    K     PK ++    + + ++  G  H  +++  G+ F +     
Sbjct: 57  GAGFHQLPAGSDGARK-----PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEY----- 106

Query: 263 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
                     + H +    L+  N+  + CG++H+ A++  G+++ W G N + G LG G
Sbjct: 107 -------KYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAW-GQNLD-GQLGVG 157

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
              +     ++   L G+ +  +S G  H+  ++ +G ++++G    G LG G   +  +
Sbjct: 158 RIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDS 217

Query: 383 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE 442
           P  +++L   +    ACG  HTA + +            SG +FT+GDG  G+LGH   +
Sbjct: 218 PSCIETLDDQKVEFLACGGCHTALLTK------------SGLVFTFGDGKYGQLGHNSTQ 265

Query: 443 ARLVPTCVAALVEPNFCQVSCGHSLTVA-LTTTGHVYTMGSPVYGQLGDPKANGKLPTR 500
             L P  V  LV     Q++CG   T+A ++ TG V++ GS   GQLG+     +L  R
Sbjct: 266 NELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 324



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 103/197 (52%), Gaps = 15/197 (7%)

Query: 190 GDVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           G++F WG+   DG LG G I  S S          P+ VE+   + +  I+ G  H+  +
Sbjct: 141 GELFAWGQ-NLDGQLGVGRIFASTS---------TPEIVENLSGVPLVQISAGEAHSMAL 190

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           +  G V+SWG    G+LG G   +   P  I+ L +  VE +ACG  HT  +T SG ++T
Sbjct: 191 SMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLTKSGLVFT 250

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDG 367
           +G     +G LGH +  +   P+ + G L G  V+ ++CG  HT A V+  G++F+FG G
Sbjct: 251 FGDG--KYGQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSG 307

Query: 368 TFGVLGHGDRISVSTPR 384
             G LG+G   +   PR
Sbjct: 308 KEGQLGNGGTRNQLIPR 324



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 106/237 (44%), Gaps = 27/237 (11%)

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           + + S+  G  H  V++S G+ F +            + S+   R    L+    ++  C
Sbjct: 82  MKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQEKNIIQITC 129

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNF 458
           G +H+ A+               G+LF WG    G+LG G   A    P  V  L     
Sbjct: 130 GDYHSLAL------------SKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 177

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            Q+S G + ++AL+ +G+VY+ G    GQLG     N   P+ +E  L    VE +ACG 
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIE-TLDDQKVEFLACGG 236

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            H A+LT    V+T+G G  G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 237 CHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLA 293



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 7/148 (4%)

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           DG      +  + AR    C+  L E N  Q++CG   ++AL+  G ++  G  + GQLG
Sbjct: 100 DGKPFEYKYSIEHARF--QCI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLG 155

Query: 490 DPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
             +  A+   P  VE  L+   + +I+ G+ H   L+    VY+WG+   G+LG G T +
Sbjct: 156 VGRIFASTSTPEIVEN-LSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYN 214

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           ++ PS +E L D++V+ + CG   TA +
Sbjct: 215 KDSPSCIETLDDQKVEFLACGGCHTALL 242



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 18/160 (11%)

Query: 178 SQGSGHDDGDSL-GDVFIWG--ECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           S G  H    S+ G+V+ WG  +C   G LG G            DS  P  +E+     
Sbjct: 181 SAGEAHSMALSMSGNVYSWGRNDC---GQLGLG-------HTYNKDS--PSCIETLDDQK 228

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ +ACGG H AL+TK G VF++G+   G+LGH    +   P+L+  L    V  +ACG 
Sbjct: 229 VEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGR 288

Query: 295 HHTCA-VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            HT A V+ +G ++++G      G LG+G   +  +P+ +
Sbjct: 289 QHTLAYVSDTGKVFSFGSGKE--GQLGNGGTRNQLIPRPM 326


>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 172/362 (47%), Gaps = 42/362 (11%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACGEHH 296
           IACGG H   +T+ G V++ G    G+LG  VD +  + P  + AL    +  +A G +H
Sbjct: 71  IACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPKKIIH-IAAGYYH 129

Query: 297 TCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           + A+T  G++Y WG  SN   GL G     ++ +P K+   L GI +  V+ G  H+   
Sbjct: 130 SAAITADGELYMWGKNSNGQLGL-GKKAANAVSVPSKVE-CLNGISIKMVALGSEHSVAA 187

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISV---------STPREVDSLKGLRTVRAACGVWHTAA 406
           T  G+  ++G G  G LGHG   S+           PR +  L+G++    A G+ H+A 
Sbjct: 188 TDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSAC 247

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
           + E            +G +F +G+    + G  + +    P+ ++ L  P   QV+CG  
Sbjct: 248 IDE------------NGSVFIFGERAMDKFGFREAKNATAPSMISEL--PYSKQVACGGY 293

Query: 467 LTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            T  ++++G ++T GS   G LG         P R+EG  +KN V +++CG  H A + S
Sbjct: 294 HTCVISSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAI-S 352

Query: 526 RTEVYTWGKGAN------------GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
              V+TWG G +            G+LG G   D   P +VE  +  +   + CG + T 
Sbjct: 353 EGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCGFNHTG 412

Query: 574 AI 575
           AI
Sbjct: 413 AI 414



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 154/340 (45%), Gaps = 47/340 (13%)

Query: 257 WGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 316
           WG    GRLG G       P +  A  + ++  +ACG  HT  +T SG +Y  G ++  F
Sbjct: 38  WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLND--F 95

Query: 317 GLLGHGNEMSL--------WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           G LG   + +          LPKK+      IH+++   G +H+A +T+ G+L+ +G  +
Sbjct: 96  GQLGVSVDKNYTTEPLEVSALPKKI------IHIAA---GYYHSAAITADGELYMWGKNS 146

Query: 369 FGVLGHGDRIS--VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G LG G + +  VS P +V+ L G+     A G  H+ A  +             G+  
Sbjct: 147 NGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATD------------QGEAL 194

Query: 427 TWGDGDRGRLGHGDKEARL---------VPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
           +WG G  GRLGHG + + L          P  +  L       V+ G   +  +   G V
Sbjct: 195 SWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSV 254

Query: 478 YTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           +  G     + G  +A N   P+ +       + +++ACG YH  V++S  E++TWG   
Sbjct: 255 FIFGERAMDKFGFREAKNATAPSMIS---ELPYSKQVACGGYHTCVISSSGELFTWGSNE 311

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQ-VKSIVCGTSFTAAI 575
           NG LG G  +  +FP  +E    K  V  + CG   TAAI
Sbjct: 312 NGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAI 351



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 121/235 (51%), Gaps = 20/235 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDS-FVPKAVESAVVLDVQNIACGGRHAALV 248
           G+   WG   G G LG G H S      +  S + P+ +     + V+N+A G  H+A +
Sbjct: 191 GEALSWG-AGGSGRLGHG-HESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACI 248

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
            + G VF +GE    + G     + + P +I  L     + VACG +HTC ++ SG+++T
Sbjct: 249 DENGSVFIFGERAMDKFGFREAKNATAPSMISELPY--SKQVACGGYHTCVISSSGELFT 306

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG--- 365
           WG SN N G LG G   ++  P+++ GP     VS VSCG  HTA + S G +FT+G   
Sbjct: 307 WG-SNEN-GCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAI-SEGNVFTWGWGG 363

Query: 366 -DGTF--------GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             GTF        G LG G  +    P+ V+  + +R ++ +CG  HT A++E +
Sbjct: 364 SYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCGFNHTGAILEYI 418


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 155/315 (49%), Gaps = 43/315 (13%)

Query: 215 AGVKMDSFVPKAVESAVVLD-------VQNIACGGRHAALVTKQGEVFSWGEELGGRLGH 267
           +G K+   V K   + V++D       + +I+ G  ++A VT  G V++WG    G+LG 
Sbjct: 205 SGSKVGEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGL 264

Query: 268 GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL 327
           G      +P++I +L N ++  +ACG  H  A++ SGD+YTWG     FG LGHG   SL
Sbjct: 265 GDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLG--VFGQLGHGKLKSL 322

Query: 328 WLPKK-LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG------------H 374
             PKK L    +   +  V+ G   T  V+  G+LF+FG G +G LG            +
Sbjct: 323 LHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNN 382

Query: 375 GDR---ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           GDR   +  S P++V +L+ ++  + ACG  HT AV             +   ++TWG G
Sbjct: 383 GDRDDHLKYSLPKQVKALESVKVRKVACGHLHTIAV------------TTDNDVYTWGWG 430

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLG 489
             G LG GD++ +LVP  V +L       VS G  H+L V  + T    T  +  Y QL 
Sbjct: 431 SSGCLGFGDRKFQLVPQRVPSLSGEEISSVSGGEKHTLIVRSSDT----TTFAFDYKQLV 486

Query: 490 DPKANGKLPTRVEGK 504
           + +  G +   V+ K
Sbjct: 487 NDQKTGDIAFLVQNK 501



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 122/254 (48%), Gaps = 31/254 (12%)

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           I +  +S G  ++A VTS G ++T+G    G LG GDR     PR + SL     V  AC
Sbjct: 230 IKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIAC 289

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPN 457
           G  H AA+              SG L+TWG G  G+LGHG  ++ L P  V      +  
Sbjct: 290 GRQHMAAI------------SKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKK 337

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--------DPKANGK--------LPTRV 501
             QV+ G + T+A++  G +++ G   YGQLG        D   NG         LP +V
Sbjct: 338 IVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQV 397

Query: 502 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 561
           +  L    V ++ACG  H   +T+  +VYTWG G++G LG GD   +  P  V +L  ++
Sbjct: 398 KA-LESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEE 456

Query: 562 VKSIVCGTSFTAAI 575
           + S+  G   T  +
Sbjct: 457 ISSVSGGEKHTLIV 470



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 143/286 (50%), Gaps = 35/286 (12%)

Query: 259 EELGGRLGHGVDSDVSHPKLID-ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG 317
           E+ G ++G  VD +   P L+D   K+I +  ++ G  ++ AVT +G++YTWG +    G
Sbjct: 203 EKSGSKVGEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEK--G 260

Query: 318 LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 377
            LG G+      P+ +   L    + +++CG  H A ++ +G L+T+G G FG LGHG  
Sbjct: 261 QLGLGDRWYHGNPRVIRS-LSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKL 319

Query: 378 ISVSTPREVDSL--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
            S+  P++V     +  + V+ A G   T AV E            +G+LF++G G+ G+
Sbjct: 320 KSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSE------------NGELFSFGHGEYGQ 367

Query: 436 LG------------HGDKEARL---VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
           LG            +GD++  L   +P  V AL      +V+CGH  T+A+TT   VYT 
Sbjct: 368 LGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHTIAVTTDNDVYTW 427

Query: 481 GSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTS 525
           G    G LG      +L P RV   L+   +  ++ G+ H  ++ S
Sbjct: 428 GWGSSGCLGFGDRKFQLVPQRVPS-LSGEEISSVSGGEKHTLIVRS 472



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 144/338 (42%), Gaps = 37/338 (10%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V S+G    G+LG  V+ D   P +I  LK   ++ +ACGE H+ AVT  GD+Y+WG   
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGK 62

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              G LGH  + ++  P  L   LE   +  V+CG +H+  +T  G+++ +G        
Sbjct: 63  E--GELGHPQK-AMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWGQ------- 112

Query: 374 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
                      E+D+ K         GV     +VE+    S +S  +   L  + +G++
Sbjct: 113 ---------LHEIDATKS--------GVKSQGGLVEMTGIKSFASKVADHSLSMYLNGEK 155

Query: 434 GRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
                    + ++   PT    + +    +        V           GS V G++ D
Sbjct: 156 AAYDEESASSSVLQDNPTANGLVTDDQEEEEEFLPEAIVDTQQEQQPEKSGSKV-GEIVD 214

Query: 491 PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
              N   P  V+       + +I+ G  + A +TS   VYTWG    G+LG GD      
Sbjct: 215 K--NQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGN 272

Query: 551 PSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGV 584
           P ++ +L +K + +I CG    AAI     L+ W  GV
Sbjct: 273 PRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGV 310



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 1/109 (0%)

Query: 203 ILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           ++  G+ + G     V  D   P  ++      ++ IACG  H+  VT+ G+V+SWG   
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGK 62

Query: 262 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            G LGH   +  + P LI AL++  +  VACG +H+ A+T +G +Y WG
Sbjct: 63  EGELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWG 111


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 168/348 (48%), Gaps = 38/348 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RH+ L+     V S G+   G+LG         P+ I AL+ +NV+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSL 88

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG GS    G +G   E+S + PKK+   L GI +  VSCG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHSLALSK 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             Q+F++G  + G LG G  + S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
            S C  G  F WG    G+L    +   +    P  + AL       +SCG   T  L  
Sbjct: 197 -SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQ 253

Query: 474 TGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTE 528
            G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A + +  +
Sbjct: 254 DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308

Query: 529 VYTWGKGANGRLG-------HGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V ++G G + +          G+ D R   S  E L D QVK I  GT
Sbjct: 309 VISFGHGPSDKSKPTHPEALTGNFDIRCLIS-AEDLVDVQVKHIFAGT 355



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 159/335 (47%), Gaps = 33/335 (9%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDA 281
           +P+ +++   L+V  ++CG  H+  V  +G VF+WG    G+LG G   ++S  PK I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGI 340
           L  I +  V+CG +H+ A++    +++WG +  + G LG G E+ S   P+++   LEGI
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKN--SHGQLGLGKEVPSQASPQRVRS-LEGI 181

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---ISVSTPREVDSLKGLRTVRA 397
            ++ V+ G  H+  ++  G  F +G  + G L    R   +  + P  + +LK L  +  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYI 241

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           +CG  HTA +++             GK+FT+GD   G+LG+     +  P  V   ++  
Sbjct: 242 SCGDEHTAVLIQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDGL 288

Query: 458 FCQVSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
             Q+ CG   T+A   TTG V + G         P    K PT  E  LT NF  +I C 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVISFGH-------GPSDKSK-PTHPEA-LTGNF--DIRCL 337

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
                ++  + +    G  AN    H DT   + P
Sbjct: 338 ISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTSAP 372



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 148/291 (50%), Gaps = 25/291 (8%)

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
           A GE H+  +  +  + + G ++   G LG        LP+ +   LE ++V  VSCG  
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNS--RGQLGRRRAPRGELPEPIQA-LETLNVDLVSCGKE 85

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVE 409
           H+  V   G++F +G G+ G LG G+   +S TP+++ +L G++ ++ +CG +H+ A+ +
Sbjct: 86  HSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLT 468
                         ++F+WG    G+LG G +  ++  P  V +L      QV+ G + +
Sbjct: 146 ------------DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHS 193

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT----KNF-VEEIACGDYHVAVL 523
            AL+  G  +  GS   GQL     N  +P +    L+    KN  V  I+CGD H AVL
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRN--VPVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               +V+T+G  ++G+LG+  T ++  P LVE + D  V  I CG+  T A
Sbjct: 252 IQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLA 301



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 136/280 (48%), Gaps = 33/280 (11%)

Query: 164 DTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV 223
           +T  V L S     S    H      G VF WG    +G LG G          K  SF 
Sbjct: 73  ETLNVDLVSCGKEHSLAVCHK-----GRVFAWG-AGSEGQLGIG--------EFKEISFT 118

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           PK + +   + +  ++CG  H+  ++K  +VFSWG+   G+LG G  V S  S P+ + +
Sbjct: 119 PKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQAS-PQRVRS 177

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGI 340
           L+ I +  VA G  H+ A++L G  + WG SN    L   G  + +   K L+ G L+ +
Sbjct: 178 LEGIPLAQVAAGGAHSFALSLCGTSFGWG-SNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            V  +SCG  HTAV+   G++FTFGD + G LG+        P+ V+ + GL + +  CG
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCG 295

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DRGRLGH 438
            +HT A V            ++G++ ++G G  D+ +  H
Sbjct: 296 SYHTLAYVH-----------TTGQVISFGHGPSDKSKPTH 324



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   ++P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EVPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  + G+L   G       N P  + ALK+  V  I CG  
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDE 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 185/407 (45%), Gaps = 33/407 (8%)

Query: 170 LSSAVSSSSQGSGHDDGDSLGD-VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
           LSS  ++S    G + G S  D VF WG  +   +         + A  +     P+ + 
Sbjct: 108 LSSIAAASCNDGGTNGGPSFADEVFCWGSNSSQQL---------TDATPEDKLLYPRNL- 157

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
            +V   V +I  G      V   G V + G+   GRLG+G  +  S P LI+    +   
Sbjct: 158 -SVYGKVMSITAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKI 216

Query: 289 LVACG-EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 347
           L + G + H+ A+  +G ++TWG  + ++G LGHG+  +   PK +      + V +  C
Sbjct: 217 LTSKGSDGHSMAIGKNGQIWTWG--DGDYGKLGHGDSTTQKSPKLIEALASRVIVDA-DC 273

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  H+A V  AG L+ +G+G +G LG GD +  S P +V  ++     +  CG  HT  +
Sbjct: 274 GHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIR--EASQVVCGFNHTVVL 331

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
                      +     ++++G  + G+LGHGD   +  P  + AL      Q++ G  +
Sbjct: 332 -----------STDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQI 380

Query: 468 TVALTTTGHVYTMG-SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           + A+T  G +Y  G  P  G  G       LP  V G L+   V +IA G+ HV  LT  
Sbjct: 381 SAAVTREGALYVWGFGPCLGN-GSSDETFMLPKVVRG-LSGRVVIDIAIGENHVVALTKD 438

Query: 527 TEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFT 572
             V+TWG   NG+ G G        P +V+ L    ++ +  GT+ T
Sbjct: 439 GLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHT 485



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 146/288 (50%), Gaps = 28/288 (9%)

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           + + +++ WG SN +  L     E  L  P+ L+  + G  V S++ G + T  V S G 
Sbjct: 126 SFADEVFCWG-SNSSQQLTDATPEDKLLYPRNLS--VYG-KVMSITAGQYCTFAVLSNGT 181

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV-WHTAAVVEVMVGSSSSSN 419
           +   G G++G LG+G   S S+P  ++    +R +  + G   H+ A+ +          
Sbjct: 182 VMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSMAIGK---------- 231

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
             +G+++TWGDGD G+LGHGD   +  P  + AL         CGH  + A+   GH+Y 
Sbjct: 232 --NGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYM 289

Query: 480 MGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVYTWGKGA 536
            G   YG+LG   A  + +P +V      +   ++ CG  H  VL++  RT V+++G   
Sbjct: 290 WGEGDYGRLGLGDALQRSVPVQVPDIREAS---QVVCGFNHTVVLSTDGRT-VWSFGAAE 345

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKW 580
           NG+LGHGDT+ +  P +++AL+   +  I  GT  +AA+     L+ W
Sbjct: 346 NGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVW 393



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 24/286 (8%)

Query: 244 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
           H+  + K G++++WG+   G+LGHG  +    PKLI+AL +  +    CG  H+ AV  +
Sbjct: 225 HSMAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDA 284

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ-LF 362
           G +Y WG    ++G LG G+ +   +P ++    E    S V CG  HT V+++ G+ ++
Sbjct: 285 GHLYMWG--EGDYGRLGLGDALQRSVPVQVPDIRE---ASQVVCGFNHTVVLSTDGRTVW 339

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           +FG    G LGHGD      P+ +D+L+GL   + A G   +AAV               
Sbjct: 340 SFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTR------------E 387

Query: 423 GKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           G L+ WG G    LG+G   E  ++P  V  L       ++ G +  VALT  G V+T G
Sbjct: 388 GALYVWGFGP--CLGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWG 445

Query: 482 SPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
           +   GQ   G   A    P  V+G L    ++++  G  H  V ++
Sbjct: 446 NNQNGQCGTGSGMATYTSPQMVQG-LHGAGIQQVTAGTTHTFVWSA 490


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 113/232 (48%), Gaps = 17/232 (7%)

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG-LRTV 395
           L  +  S++S G  H A VT  G ++T+G G +G LGHGD +    P+ V  +KG +++V
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGEVKSV 329

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            A  G +HT AV               G LFTWGDG  G+LGH D   RL+PT VAA +E
Sbjct: 330 SA--GFYHTVAVTH------------HGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIE 375

Query: 456 PNF--CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
                     G S T+ L   G V++ GS   G+LG    N +        L       I
Sbjct: 376 WGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSI 435

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
           A G  H   LT + ++YTWG G  GRLGHG   D   P  +  +    +K+I
Sbjct: 436 AAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAI 487



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 18/256 (7%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++ G  H A VT  G V++WG+   G+LGHG D D   P+ +  +K   V+ V+ G +HT
Sbjct: 278 LSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKG-EVKSVSAGFYHT 336

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE-GIHVSSVSCGPWHTAVVT 356
            AVT  G ++TWG  +   G LGH +     +P  +   +E G+ V++   G  HT V+ 
Sbjct: 337 VAVTHHGALFTWG--DGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLN 394

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             GQ+F+FG G  G LGHG+     +P  + +L+  R V  A G  H+ A+ +       
Sbjct: 395 RRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTD------- 447

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF--CQVSCGHSLTVALTTT 474
                 G+++TWG G  GRLGHG     ++P  +A +         V+ G + T    + 
Sbjct: 448 -----QGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSE 502

Query: 475 GHVYTMGSPVYGQLGD 490
           G + T+G   +G++ +
Sbjct: 503 GSLITLGRVSHGRMAE 518



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 131/267 (49%), Gaps = 16/267 (5%)

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           +  L+ +    ++ G  H  AVT +G +YTWG     +G LGHG+++   +P+ +  P  
Sbjct: 267 LSLLRRVVFSALSFGAGHCAAVTDTGLVYTWG--QGRYGQLGHGDDVDKIIPQPV--PRI 322

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
              V SVS G +HT  VT  G LFT+GDG  G LGH D      P          T+ AA
Sbjct: 323 KGEVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIP----------TLVAA 372

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
              W          GS +      G++F++G GD GRLGHG+   +  PT ++AL     
Sbjct: 373 FIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERC 432

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI--ACG 516
             ++ G + +VALT  G +YT G    G+LG    + ++  R    ++ + ++ I  A G
Sbjct: 433 VSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAG 492

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHG 543
           + H  +  S   + T G+ ++GR+  G
Sbjct: 493 EAHTCIFRSEGSLITLGRVSHGRMAEG 519



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 31/284 (10%)

Query: 175 SSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
           S+ S G+GH       G V+ WG+    G  G   H      G  +D  +P+ V   +  
Sbjct: 276 SALSFGAGHCAAVTDTGLVYTWGQ----GRYGQLGH------GDDVDKIIPQPVPR-IKG 324

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA-- 291
           +V++++ G  H   VT  G +F+WG+   G+LGH  ++    P L+ A     + + A  
Sbjct: 325 EVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQ 384

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
            G  HT  +   G ++++G  +   G LGHGN+   W P  L+  LE     S++ G  H
Sbjct: 385 AGGSHTLVLNRRGQVFSFGSGDS--GRLGHGNDNDQWSPTFLSA-LESERCVSIAAGFAH 441

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD--SLKGLRTVRAACGVWHTAAVVE 409
           +  +T  GQ++T+G G  G LGHG       PR++   S   ++ +  A G  HT     
Sbjct: 442 SVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFR- 500

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
                      S G L T G    GR+  G     ++ T   A+
Sbjct: 501 -----------SEGSLITLGRVSHGRMAEGSCAQDMLDTLHTAI 533



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 4/192 (2%)

Query: 387 DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL 445
           +S+K  R  RA   +        +  G+   +  + +G ++TWG G  G+LGHGD   ++
Sbjct: 255 NSIKKHRVTRAGLSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKI 314

Query: 446 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGK 504
           +P  V   ++     VS G   TVA+T  G ++T G    G+LG +  A   +PT V   
Sbjct: 315 IPQPVPR-IKGEVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAF 373

Query: 505 LTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
           +     V     G  H  VL  R +V+++G G +GRLGHG+ +D+  P+ + AL+ ++  
Sbjct: 374 IEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCV 433

Query: 564 SIVCGTSFTAAI 575
           SI  G + + A+
Sbjct: 434 SIAAGFAHSVAL 445


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 168/348 (48%), Gaps = 38/348 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RH+ L+     V S G+   G+LG         P+ I AL+ +NV+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSL 88

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG GS    G +G   E+S + PKK+   L GI +  VSCG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHSLALSK 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             Q+F++G  + G LG G  + S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
            S C  G  F WG    G+L    +   +    P  + AL       +SCG   T  L  
Sbjct: 197 -SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQ 253

Query: 474 TGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTE 528
            G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A + +  +
Sbjct: 254 DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308

Query: 529 VYTWGKGANGRLG-------HGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V ++G G + +          G+ D R   S  E L D QVK I  GT
Sbjct: 309 VISFGHGPSDKSKPTHPEALTGNFDIRCLIS-AEDLVDVQVKHIFAGT 355



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 159/335 (47%), Gaps = 33/335 (9%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDA 281
           +P+ +++   L+V  ++CG  H+  V  +G VF+WG    G+LG G   ++S  PK I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGI 340
           L  I +  V+CG +H+ A++    +++WG +  + G LG G E+ S   P+++   LEGI
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKN--SHGQLGLGKEVPSQASPQRVRS-LEGI 181

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---ISVSTPREVDSLKGLRTVRA 397
            ++ V+ G  H+  ++  G  F +G  + G L    R   +  + P  + +LK L  +  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYI 241

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           +CG  HTA +++             GK+FT+GD   G+LG+     +  P  V   ++  
Sbjct: 242 SCGDEHTAVLIQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDGL 288

Query: 458 FCQVSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
             Q+ CG   T+A   TTG V + G         P    K PT  E  LT NF  +I C 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVISFGH-------GPSDKSK-PTHPEA-LTGNF--DIRCL 337

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
                ++  + +    G  AN    H DT   + P
Sbjct: 338 ISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTSAP 372



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 148/291 (50%), Gaps = 25/291 (8%)

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
           A GE H+  +  +  + + G ++   G LG        LP+ +   LE ++V  VSCG  
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNS--RGQLGRRRAPRGELPEPIQA-LETLNVDLVSCGKE 85

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVE 409
           H+  V   G++F +G G+ G LG G+   +S TP+++ +L G++ ++ +CG +H+ A+ +
Sbjct: 86  HSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLT 468
                         ++F+WG    G+LG G +  ++  P  V +L      QV+ G + +
Sbjct: 146 ------------DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHS 193

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT----KNF-VEEIACGDYHVAVL 523
            AL+  G  +  GS   GQL     N  +P +    L+    KN  V  I+CGD H AVL
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRN--VPVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               +V+T+G  ++G+LG+  T ++  P LVE + D  V  I CG+  T A
Sbjct: 252 IQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLA 301



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 136/280 (48%), Gaps = 33/280 (11%)

Query: 164 DTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV 223
           +T  V L S     S    H      G VF WG    +G LG G          K  SF 
Sbjct: 73  ETLNVDLVSCGKEHSLAVCHK-----GRVFAWG-AGSEGQLGIG--------EFKEISFT 118

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           PK + +   + +  ++CG  H+  ++K  +VFSWG+   G+LG G  V S  S P+ + +
Sbjct: 119 PKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQAS-PQRVRS 177

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGI 340
           L+ I +  VA G  H+ A++L G  + WG SN    L   G  + +   K L+ G L+ +
Sbjct: 178 LEGIPLAQVAAGGAHSFALSLCGTSFGWG-SNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            V  +SCG  HTAV+   G++FTFGD + G LG+        P+ V+ + GL + +  CG
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCG 295

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DRGRLGH 438
            +HT A V            ++G++ ++G G  D+ +  H
Sbjct: 296 SYHTLAYVH-----------TTGQVISFGHGPSDKSKPTH 324



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   ++P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EVPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  + G+L   G       N P  + ALK+  V  I CG  
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDE 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 176/357 (49%), Gaps = 36/357 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           VQ ++CG +H   + + G + S G+   G+LG    S+ S  + I +L+   +  ++CG 
Sbjct: 36  VQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGR--KSNNSSIEQISSLEAQTIVDISCGT 93

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPWHT 352
           +H+ AV+  G +Y+WG GS    G LG GN  S  + PKK+ G L    +  +SCG +H+
Sbjct: 94  NHSVAVSDEGSIYSWGDGSE---GQLGTGNLSSRNFTPKKITG-LFNTKIIQISCGNFHS 149

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             ++  G++F++G    G LG G + I+ +TP+ V SLKG+  V+   G           
Sbjct: 150 LALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAG----------- 198

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR--LVPTCVAALVEPNFCQVSCGHSLTV 469
            GS S +   SG +F WG  + G+LG      +    P  V +L       +SCG   T 
Sbjct: 199 -GSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTA 257

Query: 470 ALTTTGHVYTMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAV-LTSRT 527
            L+  G VYT G   +GQLG    N   +P ++E    +  V ++ACG YH  + + S  
Sbjct: 258 VLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAGQ--VSQVACGRYHTLLYVFSCN 315

Query: 528 EVYTWGKGANGRLGHGD-TDDRNFPSLVEA--------LKDKQVKSIVCGTSFTAAI 575
            + ++GKG+     + + +D+   PS  +         L+D  VK I  G +   A+
Sbjct: 316 RIVSFGKGSLRPQDNTECSDEAELPSEFDISSLVPTNDLRDVYVKWIFAGNNVGFAV 372



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 155/323 (47%), Gaps = 28/323 (8%)

Query: 254 VFSWGEELGGRLG--HGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWG 310
           ++ WG+   G+L    G + +V H K  D  ++   V+ V+CGE HT  +   G + + G
Sbjct: 1   MYCWGDNCFGQLALLQG-EKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCG 59

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            +   +G LG  +  S     +    LE   +  +SCG  H+  V+  G ++++GDG+ G
Sbjct: 60  QNP--YGQLGRKSNNS---SIEQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEG 114

Query: 371 VLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG G+  S + TP+++  L   + ++ +CG +H+ A+ E             G++F+WG
Sbjct: 115 QLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSE------------DGRVFSWG 162

Query: 430 DGDRGRLGHGDKEA-RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
               G+LG G +   +  P  V +L      QV+ G S + AL+ +G V+  G    GQL
Sbjct: 163 QNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQL 222

Query: 489 G---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           G   DP   G         L    V  I+CG+ H AVL+    VYT+G   +G+LG    
Sbjct: 223 GFKSDP-MKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSG 281

Query: 546 DDRNFPSLVEALKDKQVKSIVCG 568
           +  + P  +E     QV  + CG
Sbjct: 282 NQTSVPQKIEDYAG-QVSQVACG 303



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 116/222 (52%), Gaps = 16/222 (7%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G ++ WG+ + +G LG G         +   +F PK +       +  I+CG  H+  ++
Sbjct: 103 GSIYSWGDGS-EGQLGTG--------NLSSRNFTPKKITGLFNTKIIQISCGNFHSLALS 153

Query: 250 KQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           + G VFSWG+   G+LG G    + + P+L+ +LK I +  V  G   + A+++SG ++ 
Sbjct: 154 EDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFA 213

Query: 309 WGGSNCNFGLLGHGNE--MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           WG +N   G LG  ++     + P  +N  L  + V+ +SCG  HTAV++  G ++TFGD
Sbjct: 214 WGKNNA--GQLGFKSDPMKGTFKPHAVNS-LRNLGVAYISCGEEHTAVLSKDGSVYTFGD 270

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            T G LG       S P++++   G +  + ACG +HT   V
Sbjct: 271 DTHGQLGQNSGNQTSVPQKIEDYAG-QVSQVACGRYHTLLYV 311



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 23/252 (9%)

Query: 226 AVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKN 284
           ++E+  ++D   I+CG  H+  V+ +G ++SWG+   G+LG G + S    PK I  L N
Sbjct: 80  SLEAQTIVD---ISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFN 136

Query: 285 INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 344
             +  ++CG  H+ A++  G +++WG + C  G LG G+++      +L   L+GI +  
Sbjct: 137 TKIIQISCGNFHSLALSEDGRVFSWGQNKC--GQLGLGSQIINQATPQLVKSLKGIPLVQ 194

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST--PREVDSLKGLRTVRAACGVW 402
           V+ G   +  ++ +G +F +G    G LG        T  P  V+SL+ L     +CG  
Sbjct: 195 VTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEE 254

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
           HTA + +             G ++T+GD   G+LG        VP  +         QV+
Sbjct: 255 HTAVLSK------------DGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAG-QVSQVA 301

Query: 463 CG--HSLTVALT 472
           CG  H+L    +
Sbjct: 302 CGRYHTLLYVFS 313



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 19/161 (11%)

Query: 425 LFTWGDGDRGRLG--HGDKEARLVPTCVAALVEPNFCQ-------VSCGHSLTVALTTTG 475
           ++ WGD   G+L    G+KE       V    E ++ Q       VSCG   T+ L   G
Sbjct: 1   MYCWGDNCFGQLALLQGEKE-------VVHFKENDYFQSQECVQKVSCGEKHTLYLLEDG 53

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            + + G   YGQLG    N  +       L    + +I+CG  H   ++    +Y+WG G
Sbjct: 54  TLLSCGQNPYGQLGRKSNNSSIEQI--SSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDG 111

Query: 536 ANGRLGHGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAI 575
           + G+LG G+   RNF P  +  L + ++  I CG   + A+
Sbjct: 112 SEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLAL 152


>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 152/315 (48%), Gaps = 22/315 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACG 293
           V NI+    HAA VT+ GEVF+ G+      GHG V   +  P  I ALK I+ + VA G
Sbjct: 157 VVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATG 216

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHT 352
              T  +T  G +YT G SN + G LGHG+ +    PK +    EG+  V  V+ G  +T
Sbjct: 217 LSFTVILTTDGQVYTCG-SNTH-GQLGHGDTIDRATPKIVE-LFEGLAPVVQVAAGASYT 273

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK--GLRTVRAACGVWHTAAVVEV 410
             VT  G +++FG  T   LGHGD+     PR + S K   +  VR + G  H  A+  +
Sbjct: 274 FAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDAL 333

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                       G ++TWG G  G LGHGD+  +  P  +++L      QV      T  
Sbjct: 334 ------------GYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFV 381

Query: 471 LTTTGHVYTMGSPVYGQLGDP---KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           LT  G V+  G   +G LG P    ++  +  RV   L  ++V +I+ G YH   +T+R 
Sbjct: 382 LTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRG 441

Query: 528 EVYTWGKGANGRLGH 542
            V+ +G     +LG 
Sbjct: 442 IVFGFGDNERAQLGQ 456



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 155/350 (44%), Gaps = 39/350 (11%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVD-------SDVSHPKLIDALKNINVELVACGE 294
           GR+  L+     V+S G  L G LGHG D       S V  P L   +       ++   
Sbjct: 111 GRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVN------ISASH 164

Query: 295 HHTCAVTLSGDMYTWGGSN---CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           +H   VT  G+++T G ++   C  G +G     +++ P ++   L+GI    V+ G   
Sbjct: 165 NHAAFVTELGEVFTCGDNSSLCCGHGEVGR----TIFRPTEIKA-LKGISCKQVATGLSF 219

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR-TVRAACGVWHTAAVVEV 410
           T ++T+ GQ++T G  T G LGHGD I  +TP+ V+  +GL   V+ A G  +T AV + 
Sbjct: 220 TVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTD- 278

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF--CQVSCGHSLT 468
                       G ++++G      LGHGD+   L P  + +    N    +VS G    
Sbjct: 279 -----------DGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHA 327

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           VAL   G+VYT G    G LG    N K    +   L      ++        VLT    
Sbjct: 328 VALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGS 387

Query: 529 VYTWGKGANGRLG---HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           V+ +G    G LG    G +D    P ++++L+D  V  I  G   T A+
Sbjct: 388 VFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAV 437



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCG 348
           VA G +HT  V  S  +Y+ G S C  G+LGHG + +         P   +  V ++S  
Sbjct: 108 VATGRYHTLLVHDS-SVYSCGSSLC--GVLGHGPDTTQCAAFS-RVPFPSLSRVVNISAS 163

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
             H A VT  G++FT GD +    GHG+   ++  P E+ +LKG+   + A G+  T  +
Sbjct: 164 HNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVIL 223

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGH 465
                        + G+++T G    G+LGHGD   R  P  V     + P   QV+ G 
Sbjct: 224 T------------TDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAP-VVQVAAGA 270

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNF-VEEIACGDYHVAVL 523
           S T A+T  G VY+ GS     LG    + +L P  ++    +N  V  ++ GD H   L
Sbjct: 271 SYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
            +   VYTWG+G  G LGHGD +D+  P L+ +LK  QV   VC
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLK-SQVAVQVC 373



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 159/355 (44%), Gaps = 40/355 (11%)

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGE----CTGDGILGGGIHRSGSYAGVKMDSFVP 224
           SLS  V+ S+  +       LG+VF  G+    C G G +G  I R             P
Sbjct: 153 SLSRVVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFR-------------P 199

Query: 225 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN 284
             +++   +  + +A G     ++T  G+V++ G    G+LGHG   D + PK+++  + 
Sbjct: 200 TEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEG 259

Query: 285 IN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEGIHV 342
           +  V  VA G  +T AVT  G +Y++G  +C    LGHG++     P+ +       IHV
Sbjct: 260 LAPVVQVAAGASYTFAVTDDGTVYSFG--SCTNFCLGHGDQHDELRPRAIQSFKRRNIHV 317

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
             VS G  H   + + G ++T+G G  G LGHGD    ++P  + SLK    V+      
Sbjct: 318 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKR 377

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK---EARLVPTCVAALVEPNFC 459
            T  + +             G +F +G    G LG  D+   +  + P  + +L +    
Sbjct: 378 KTFVLTD------------EGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVS 425

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEI 513
           Q+S G   TVA+T  G V+  G     QLG     G L PT +   + +  +EEI
Sbjct: 426 QISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEI---MFQKSMEEI 477



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 108/237 (45%), Gaps = 28/237 (11%)

Query: 340 IHVSS----VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRT 394
           +H SS    V+ G +HT +V  +  +++ G    GVLGHG D    +    V      R 
Sbjct: 99  VHTSSGNMQVATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRV 157

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAAL 453
           V  +    H A V E+            G++FT GD      GHG+    +  PT + AL
Sbjct: 158 VNISASHNHAAFVTEL------------GEVFTCGDNSSLCCGHGEVGRTIFRPTEIKAL 205

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF---- 509
              +  QV+ G S TV LTT G VYT GS  +GQLG    +G    R   K+ + F    
Sbjct: 206 KGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLG----HGDTIDRATPKIVELFEGLA 261

Query: 510 -VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
            V ++A G  +   +T    VY++G   N  LGHGD  D   P  +++ K + +  +
Sbjct: 262 PVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVV 318


>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
          Length = 794

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 182/402 (45%), Gaps = 67/402 (16%)

Query: 220 DSFVPKAVESAVVLDVQN---------IACGGRHAALVTKQGEVFSWGEELGGRLG---- 266
           D F+PK +       +QN         I+ G  H+A+VTK GE++  G +L G+LG    
Sbjct: 186 DQFLPKPIS------IQNLKLSHTAKYISSGSHHSAIVTKAGELYVSGSQLHGKLGIQSV 239

Query: 267 HGVD-SDVSHPKLIDALK-NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 324
           +G+  S  +   + D +K N  V+ VACG++HT  +   G ++ WGG+      +G  N 
Sbjct: 240 NGMHVSKFTQVTMFDGIKVNQKVKQVACGDYHTLCLMQDGQVFAWGGTL--HKKVGEKNA 297

Query: 325 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG----TFGVLGHGDRISV 380
            +     ++   L+G  +  + CG +H+  +   G+++++G G      G  GHG+   +
Sbjct: 298 QAQNNEPRIVSGLQGKQIVHIDCGDFHSVALDIQGRVYSWGGGGASYNKGQCGHGNNEDI 357

Query: 381 STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD 440
             P +V  +   + V+ + G +HT A+ E              +L+ WG G  G  G G+
Sbjct: 358 EQPIQVQGIAHRKIVQISAGGFHTLALCE-----------EDNELYAWGSGTYGECGLGE 406

Query: 441 KEARLVPTCVA--------------------ALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            +A   P  V                     +  +P   Q+S G   T+ LT+ G VY+ 
Sbjct: 407 FQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGGHHTLLLTSRGRVYSF 466

Query: 481 GSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           G   +GQLG     N   P  V+  L+KN ++ IA G  H  +L+ + +++  G G +G+
Sbjct: 467 GYGSHGQLGLRSTKNFCSPQLVKDLLSKN-IKAIAAGWNHSLILSDKGDLFACGYGNHGQ 525

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWV 581
           LG  D + R   + V  L  K   +I  G +       H WV
Sbjct: 526 LGLNDKEPRTQFTHVANLGGKNAYNIYAGGN-------HSWV 560



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 174/363 (47%), Gaps = 62/363 (17%)

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV----ELVACGEHHTCAVTL 302
           + TK+  ++S+G+   G LG     D   PK I +++N+ +    + ++ G HH+  VT 
Sbjct: 161 IKTKKAYIWSFGKNSDGELGISSQKDQFLPKPI-SIQNLKLSHTAKYISSGSHHSAIVTK 219

Query: 303 SGDMYTWGGSNCNFGLLG----HGNEMSLWLPKKLNGPLEGIHVS----SVSCGPWHTAV 354
           +G++Y   GS  + G LG    +G  +S +    +    +GI V+     V+CG +HT  
Sbjct: 220 AGELYV-SGSQLH-GKLGIQSVNGMHVSKFTQVTM---FDGIKVNQKVKQVACGDYHTLC 274

Query: 355 VTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           +   GQ+F +G      +G  + +   + PR V  L+G + V   CG +H+ A+      
Sbjct: 275 LMQDGQVFAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVAL------ 328

Query: 414 SSSSSNCSSGKLFTWGDG----DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
                    G++++WG G    ++G+ GHG+ E    P  V  +      Q+S G   T+
Sbjct: 329 ------DIQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTL 382

Query: 470 AL-TTTGHVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVE--------------- 511
           AL      +Y  GS  YG+  LG+ +A+ K P  V  K+ K+FV                
Sbjct: 383 ALCEEDNELYAWGSGTYGECGLGEFQASSK-PKIV--KMPKDFVSNQEMNQMQNEFAFSS 439

Query: 512 ------EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
                 +I+ G +H  +LTSR  VY++G G++G+LG   T +   P LV+ L  K +K+I
Sbjct: 440 QKPLITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDLLSKNIKAI 499

Query: 566 VCG 568
             G
Sbjct: 500 AAG 502



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 133/325 (40%), Gaps = 51/325 (15%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG         G +H+       +  +  P+ V       + +I CG  H+  + 
Sbjct: 279 GQVFAWG---------GTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVALD 329

Query: 250 KQGEVFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV-TLSG 304
            QG V+SWG        G+ GHG + D+  P  +  + +  +  ++ G  HT A+     
Sbjct: 330 IQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDN 389

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-------------------VSSV 345
           ++Y WG     +G  G G   +   PK +  P + +                    ++ +
Sbjct: 390 ELYAWGSG--TYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQI 447

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 405
           S G  HT ++TS G++++FG G+ G LG     +  +P+ V  L   + ++A    W+ +
Sbjct: 448 SAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDLLS-KNIKAIAAGWNHS 506

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG- 464
            ++              G LF  G G+ G+LG  DKE R   T VA L   N   +  G 
Sbjct: 507 LIL-----------SDKGDLFACGYGNHGQLGLNDKEPRTQFTHVANLGGKNAYNIYAGG 555

Query: 465 -HSLTVA--LTTTGHVYTMGSPVYG 486
            HS  V   L      Y   SPV G
Sbjct: 556 NHSWVVIDDLMPVRDNYRPPSPVGG 580


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 169/348 (48%), Gaps = 38/348 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RH+ L+     V S G+   G+LG         P+ I AL+ +NV+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSL 88

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG GS    G +G   E+S + PKK+   L GI +  VSCG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHSLALSK 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             Q+F++G  + G LG G  + S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
            S C  G  F WG    G+L    +   +    P  + AL       +SCG   T  L  
Sbjct: 197 -SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQ 253

Query: 474 TGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTE 528
            G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A + +  +
Sbjct: 254 DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308

Query: 529 VYTWGKGAN--GRLGH-----GDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V ++G G +   +  H     G+ D R   S  E L D QVK I  GT
Sbjct: 309 VISFGHGPSDTSKPTHPEALTGNFDIRCLIS-AEDLVDVQVKHIFAGT 355



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 159/335 (47%), Gaps = 33/335 (9%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDA 281
           +P+ +++   L+V  ++CG  H+  V  +G VF+WG    G+LG G   ++S  PK I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGI 340
           L  I +  V+CG +H+ A++    +++WG +  + G LG G E+ S   P+++   LEGI
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKN--SHGQLGLGKEVPSQASPQRVRS-LEGI 181

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---ISVSTPREVDSLKGLRTVRA 397
            ++ V+ G  H+  ++  G  F +G  + G L    R   +  + P  + +LK L  +  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYI 241

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           +CG  HTA +++             GK+FT+GD   G+LG+     +  P  V   ++  
Sbjct: 242 SCGDEHTAVLIQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDGL 288

Query: 458 FCQVSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
             Q+ CG   T+A   TTG V + G         P    K PT  E  LT NF  +I C 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVISFGH-------GPSDTSK-PTHPEA-LTGNF--DIRCL 337

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
                ++  + +    G  AN    H DT   + P
Sbjct: 338 ISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTSAP 372



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 148/291 (50%), Gaps = 25/291 (8%)

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
           A GE H+  +  +  + + G ++   G LG        LP+ +   LE ++V  VSCG  
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNS--RGQLGRRRAPRGELPEPIQA-LETLNVDLVSCGKE 85

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVE 409
           H+  V   G++F +G G+ G LG G+   +S TP+++ +L G++ ++ +CG +H+ A+ +
Sbjct: 86  HSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLT 468
                         ++F+WG    G+LG G +  ++  P  V +L      QV+ G + +
Sbjct: 146 ------------DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHS 193

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT----KNF-VEEIACGDYHVAVL 523
            AL+  G  +  GS   GQL     N  +P +    L+    KN  V  I+CGD H AVL
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRN--VPVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               +V+T+G  ++G+LG+  T ++  P LVE + D  V  I CG+  T A
Sbjct: 252 IQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLA 301



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 132/271 (48%), Gaps = 31/271 (11%)

Query: 164 DTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV 223
           +T  V L S     S    H      G VF WG    +G LG G          K  SF 
Sbjct: 73  ETLNVDLVSCGKEHSLAVCHK-----GRVFAWG-AGSEGQLGIG--------EFKEISFT 118

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           PK + +   + +  ++CG  H+  ++K  +VFSWG+   G+LG G  V S  S P+ + +
Sbjct: 119 PKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQAS-PQRVRS 177

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGI 340
           L+ I +  VA G  H+ A++L G  + WG SN    L   G  + +   K L+ G L+ +
Sbjct: 178 LEGIPLAQVAAGGAHSFALSLCGTSFGWG-SNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            V  +SCG  HTAV+   G++FTFGD + G LG+        P+ V+ + GL + +  CG
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCG 295

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
            +HT A V            ++G++ ++G G
Sbjct: 296 SYHTLAYVH-----------TTGQVISFGHG 315



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   ++P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EVPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  + G+L   G       N P  + ALK+  V  I CG  
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDE 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 19/341 (5%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEE-LGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
           + A G     L+T + E++ WG   +   L    D  + +P L +  +++ +  +  G  
Sbjct: 91  DAAAGWTQNFLLTTRHELYYWGSSGVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQ 150

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           H  A++ +G++Y WG  N  FG  G GN+ +  LP ++        +  VSCG  H+A V
Sbjct: 151 HGIALSKNGEVYIWG--NSEFGQTGLGNKEAQHLPIRME-FFRDKSIVDVSCGLDHSAAV 207

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           +  G+++T+G G  G LGH        P+E+  ++G    R  CG   T  +        
Sbjct: 208 SKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLL-------- 259

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
              N + G+LFT+G+G+ G+LGHG++   L P+ V      N  +V+ G +  +ALT  G
Sbjct: 260 ---NETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPL---DNVKEVAAGGAHMLALTKDG 313

Query: 476 HVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
             ++ G    G+LG       L P  +        V  ++ G  H   LT   +VY WG 
Sbjct: 314 QAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGF 373

Query: 535 GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            A+GRLG G+      P+L++AL DK+V   +CG   +  I
Sbjct: 374 NASGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLFI 414



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 151/324 (46%), Gaps = 32/324 (9%)

Query: 211 SGSYAGVKMDS----FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 266
           SG YA + M      + P   E A  L +  I  G +H   ++K GEV+ WG    G+ G
Sbjct: 114 SGVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTG 173

Query: 267 HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEM 325
            G       P  ++  ++ ++  V+CG  H+ AV+  G ++TWG G +   G LGH    
Sbjct: 174 LGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGID---GQLGHNGTE 230

Query: 326 SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT-SAGQLFTFGDGTFGVLGHGDRISVSTPR 384
               PK+L   + G  +S V+CG   T ++  + G+LFTFG+G  G LGHG+R     P 
Sbjct: 231 DELKPKELT-VIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPS 289

Query: 385 EV--DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE 442
            V  D++K       A G  H  A+ +             G+ ++WG G+ GRLGHG  E
Sbjct: 290 VVPLDNVK-----EVAAGGAHMLALTK------------DGQAWSWGWGEDGRLGHGATE 332

Query: 443 ARLVPTCVAALVEP-NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTR 500
             L P  +  L        VS G   ++ALT +G VY  G    G+LG    +  + PT 
Sbjct: 333 DFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTL 392

Query: 501 VEGKLTKNFVEEIACGDYHVAVLT 524
           ++    K  +  I CG  H   +T
Sbjct: 393 IKALADKRVLRAI-CGLDHSLFIT 415



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 113/271 (41%), Gaps = 64/271 (23%)

Query: 190 GDVFIWGECT-GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           G+V+IWG    G   LG   ++   +  ++M+ F  K++         +++CG  H+A V
Sbjct: 159 GEVYIWGNSEFGQTGLG---NKEAQHLPIRMEFFRDKSI--------VDVSCGLDHSAAV 207

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN------------------------ 284
           +K G V++WG  + G+LGH    D   PK +  ++                         
Sbjct: 208 SKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLF 267

Query: 285 --------------------------INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGL 318
                                      NV+ VA G  H  A+T  G  ++WG      G 
Sbjct: 268 TFGNGEAGQLGHGERGLCLEPSVVPLDNVKEVAAGGAHMLALTKDGQAWSWGWGED--GR 325

Query: 319 LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
           LGHG       P+ +      + V SVS G  H+  +T +GQ++ +G    G LG G+  
Sbjct: 326 LGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNES 385

Query: 379 SVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           SV TP  + +L   R +RA CG+ H+  + +
Sbjct: 386 SVMTPTLIKALADKRVLRAICGLDHSLFITQ 416



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 19/226 (8%)

Query: 355 VTSAGQ-LFTFGDGTFGVLGHGDRISVSTPREVDSLK-GLRTVRAACGVWHTAAVVEVMV 412
           V   GQ ++T G G    LG GD      P  V  L  G   + AA G W    ++    
Sbjct: 48  VPKPGQGVYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAG-WTQNFLL---- 102

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQVSCGHSLTVAL 471
                   +  +L+ WG      L    ++ R+  PT           ++  G    +AL
Sbjct: 103 -------TTRHELYYWGSSGVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIAL 155

Query: 472 TTTGHVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           +  G VY  G+  +GQ  LG+ +A   LP R+E    K+ V+ ++CG  H A ++    V
Sbjct: 156 SKNGEVYIWGNSEFGQTGLGNKEAQ-HLPIRMEFFRDKSIVD-VSCGLDHSAAVSKDGRV 213

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +TWG G +G+LGH  T+D   P  +  ++ + +  + CGT FT  +
Sbjct: 214 WTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLL 259


>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
 gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
          Length = 819

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 205/466 (43%), Gaps = 97/466 (20%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG+   +GILG          G  +DS +P  V      DV+ I+CG  H A++ 
Sbjct: 379 GTVWTWGKNI-NGILG---------LGTALDSQIPSVVSGTG--DVEVISCGKTHMAIIK 426

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G +++WG  + G+LG+G    ++ P  I+ + NI+   ++CG  H  A+  +  ++ W
Sbjct: 427 SDGTLWTWGYNIYGQLGNGNVDYITEPVTINGISNIS--KISCGGKHVLAIDENKTLWAW 484

Query: 310 G-----------------GSN--------------------CNFGLLGHGNE-------- 324
           G                 GSN                     N  L+ + +E        
Sbjct: 485 GNNDYLQLIDDVGLSAESGSNDYCIPFAVKSEKDVKDIVAAFNRTLVVYEDEEVWIYAAK 544

Query: 325 -------MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 377
                   S++LP K+ G LEG  V+ VS G  H   +   G +++ G+  +G LG G +
Sbjct: 545 NTVAGDEQSVYLPYKIEG-LEG--VTDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQ 601

Query: 378 ISVSTPREVDSL---KGLRTVRA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
              ++  E  +L   KGL  + A A G  H+ A+             + G ++TWG    
Sbjct: 602 THHNSYSETFNLTKAKGLTNIVAVAAGSEHSVAL------------KNDGTVWTWGSNQF 649

Query: 434 GRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-- 491
           G L HG+    L P     L   N C +S G++  +AL   G V+  G   YGQLG+   
Sbjct: 650 GELAHGNDTFSLEPMQAEGL--ENICAISAGNNYNLALKEDGTVWAWGDNTYGQLGNGST 707

Query: 492 -KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
            K N  +P +V+G   +N V+ IA  D   A+ T   +V+ WGK   G+LG G T +R  
Sbjct: 708 YKTN--VPVQVDG--LENIVKIIAGRDSSFAI-TKDGDVWAWGKNNCGQLGDGTTQNRLT 762

Query: 551 PSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 596
           P  ++A   K  KSIV G  FT  +     V GV  ++     + F
Sbjct: 763 PVKIDAF--KGCKSIVSGMDFTMVLMNDGTVIGVGSNVSGVMTLGF 806



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 161/356 (45%), Gaps = 35/356 (9%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLID 280
           F  K++E  V      +ACG  H   + K G V++WG    G+LG G   ++   PK I+
Sbjct: 103 FPKKSMEGFV-----QVACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIE 157

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
            L+  +V  VA G  H+ A+   G ++ WG +   +G LG  + +    P ++ G L G 
Sbjct: 158 GLE--DVIKVAAGSRHSLALKKDGTVWAWGYN--YYGQLGDESNIRRNTPVQVKG-LTG- 211

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            V  +  G + +  +   G ++ +G    G +G G  I+ + P +   +  +  + A  G
Sbjct: 212 -VKDIDAGDFFSVALRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGVSNITQISA--G 268

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFC 459
             H  A+ +               ++ WG GD+G+LG+G   + L +P  +++  E    
Sbjct: 269 DEHVLALDK------------DKNVWGWGAGDKGQLGNGTAASFLRIPEKLSSFTEVK-- 314

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
            V  G  ++ A+   G ++  G   YG +G+ +     P +   +   + ++ +    Y 
Sbjct: 315 SVKAGTMVSAAIKEDGTLWIWGDNTYGIMGNSRNINSSPVQ---RKDISGIKAVELNQYC 371

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            A L +   V+TWGK  NG LG G   D   PS+V    D +V  I CG +  A I
Sbjct: 372 AAALKNDGTVWTWGKNINGILGLGTALDSQIPSVVSGTGDVEV--ISCGKTHMAII 425



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 164/364 (45%), Gaps = 51/364 (14%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           +PK +E   + DV  +A G RH+  + K G V++WG    G+LG   +   + P  +  L
Sbjct: 152 IPKKIEG--LEDVIKVAAGSRHSLALKKDGTVWAWGYNYYGQLGDESNIRRNTPVQVKGL 209

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIH 341
               V+ +  G+  + A+   G ++ WG    N+ G +G G  ++       N PL+ + 
Sbjct: 210 T--GVKDIDAGDFFSVALRDDGTVWGWG---YNYKGQIGCGTGIN------SNVPLQTVG 258

Query: 342 VSS---VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRA 397
           VS+   +S G  H   +     ++ +G G  G LG+G   S +  P ++ S   +++V+A
Sbjct: 259 VSNITQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGTAASFLRIPEKLSSFTEVKSVKA 318

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-----EARLVPTCVAA 452
              V  +AA+ E             G L+ WGD   G +G+          R   + + A
Sbjct: 319 GTMV--SAAIKE------------DGTLWIWGDNTYGIMGNSRNINSSPVQRKDISGIKA 364

Query: 453 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVE 511
           +    +C          AL   G V+T G  + G LG   A + ++P+ V G      VE
Sbjct: 365 VELNQYC--------AAALKNDGTVWTWGKNINGILGLGTALDSQIPSVVSG---TGDVE 413

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            I+CG  H+A++ S   ++TWG    G+LG+G+ D    P  +  + +  +  I CG   
Sbjct: 414 VISCGKTHMAIIKSDGTLWTWGYNIYGQLGNGNVDYITEPVTINGISN--ISKISCGGKH 471

Query: 572 TAAI 575
             AI
Sbjct: 472 VLAI 475



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 179/444 (40%), Gaps = 101/444 (22%)

Query: 194 IWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           +WG   GD G LG G   S      K+ SF           +V+++  G   +A + + G
Sbjct: 281 VWGWGAGDKGQLGNGTAASFLRIPEKLSSFT----------EVKSVKAGTMVSAAIKEDG 330

Query: 253 EVFSWGEELGGRLGH--GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD--MYT 308
            ++ WG+   G +G+   ++S     K I  +K   VEL     +  CA  L  D  ++T
Sbjct: 331 TLWIWGDNTYGIMGNSRNINSSPVQRKDISGIK--AVEL-----NQYCAAALKNDGTVWT 383

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           W G N N G+LG G  +   +P  ++G  +   V  +SCG  H A++ S G L+T+G   
Sbjct: 384 W-GKNIN-GILGLGTALDSQIPSVVSGTGD---VEVISCGKTHMAIIKSDGTLWTWGYNI 438

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LG+G+   ++ P  ++ +  +   + +CG  H  A+ E            +  L+ W
Sbjct: 439 YGQLGNGNVDYITEPVTINGISNIS--KISCGGKHVLAIDE------------NKTLWAW 484

Query: 429 GDGDRGRL----------GHGD-------KEARLVPTCVAAL------------------ 453
           G+ D  +L          G  D       K  + V   VAA                   
Sbjct: 485 GNNDYLQLIDDVGLSAESGSNDYCIPFAVKSEKDVKDIVAAFNRTLVVYEDEEVWIYAAK 544

Query: 454 ---------------VE--PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK 496
                          +E       VS G +  +AL   G+VY+ G+  +GQLGD      
Sbjct: 545 NTVAGDEQSVYLPYKIEGLEGVTDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQTHH 604

Query: 497 LPTRVEGKLTK-----NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
                   LTK     N V  +A G  H   L +   V+TWG    G L HG+      P
Sbjct: 605 NSYSETFNLTKAKGLTNIV-AVAAGSEHSVALKNDGTVWTWGSNQFGELAHGNDTFSLEP 663

Query: 552 SLVEALKDKQVKSIVCGTSFTAAI 575
              E L++  + +I  G ++  A+
Sbjct: 664 MQAEGLEN--ICAISAGNNYNLAL 685



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 497 LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNFPSLVE 555
           + T    K  + FV+ +ACG+YH   L     V+TWG  + G+LG G+  +    P  +E
Sbjct: 99  MITEFPKKSMEGFVQ-VACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIE 157

Query: 556 ALKD 559
            L+D
Sbjct: 158 GLED 161


>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 152/315 (48%), Gaps = 22/315 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACG 293
           V NI+    HAA VT+ GEVF+ G+      GHG V   +  P  I ALK I+ + VA G
Sbjct: 157 VVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATG 216

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHT 352
              T  +T  G +YT G SN + G LGHG+ +    PK +    EG+  V  V+ G  +T
Sbjct: 217 LSFTVILTTDGQVYTCG-SNTH-GQLGHGDTIDRATPKIVE-LFEGLAPVVQVAAGASYT 273

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK--GLRTVRAACGVWHTAAVVEV 410
             VT  G +++FG  T   LGHGD+     PR + S K   +  VR + G  H  A+  +
Sbjct: 274 FAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDAL 333

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                       G ++TWG G  G LGHGD+  +  P  +++L      QV      T  
Sbjct: 334 ------------GYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFV 381

Query: 471 LTTTGHVYTMGSPVYGQLGDP---KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           LT  G V+  G   +G LG P    ++  +  RV   L  ++V +I+ G YH   +T+R 
Sbjct: 382 LTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRG 441

Query: 528 EVYTWGKGANGRLGH 542
            V+ +G     +LG 
Sbjct: 442 IVFGFGDNERAQLGQ 456



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 155/350 (44%), Gaps = 39/350 (11%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVD-------SDVSHPKLIDALKNINVELVACGE 294
           GR+  L+     V+S G  L G LGHG D       S V  P L   +       ++   
Sbjct: 111 GRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVN------ISASH 164

Query: 295 HHTCAVTLSGDMYTWGGSN---CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           +H   VT  G+++T G ++   C  G +G     +++ P ++   L+GI    V+ G   
Sbjct: 165 NHAAFVTELGEVFTCGDNSSLCCGHGEVGR----TIFRPTEIKA-LKGISCKQVATGLSF 219

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR-TVRAACGVWHTAAVVEV 410
           T ++T+ GQ++T G  T G LGHGD I  +TP+ V+  +GL   V+ A G  +T AV + 
Sbjct: 220 TVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTD- 278

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF--CQVSCGHSLT 468
                       G ++++G      LGHGD+   L P  + +    N    +VS G    
Sbjct: 279 -----------DGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHA 327

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           VAL   G+VYT G    G LG    N K    +   L      ++        VLT    
Sbjct: 328 VALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGS 387

Query: 529 VYTWGKGANGRLG---HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           V+ +G    G LG    G +D    P ++++L+D  V  I  G   T A+
Sbjct: 388 VFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAV 437



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCG 348
           VA G +HT  V  S  +Y+ G S C  G+LGHG + +         P   +  V ++S  
Sbjct: 108 VATGRYHTLLVHDS-SVYSCGSSLC--GVLGHGPDTTQCAAFS-RVPFPSLSRVVNISAS 163

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
             H A VT  G++FT GD +    GHG+   ++  P E+ +LKG+   + A G+  T  +
Sbjct: 164 HNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVIL 223

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGH 465
                        + G+++T G    G+LGHGD   R  P  V     + P   QV+ G 
Sbjct: 224 T------------TDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAP-VVQVAAGA 270

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNF-VEEIACGDYHVAVL 523
           S T A+T  G VY+ GS     LG    + +L P  ++    +N  V  ++ GD H   L
Sbjct: 271 SYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
            +   VYTWG+G  G LGHGD +D+  P L+ +LK  QV   VC
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLK-SQVAVQVC 373



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 159/355 (44%), Gaps = 40/355 (11%)

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGE----CTGDGILGGGIHRSGSYAGVKMDSFVP 224
           SLS  V+ S+  +       LG+VF  G+    C G G +G  I R             P
Sbjct: 153 SLSRVVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFR-------------P 199

Query: 225 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN 284
             +++   +  + +A G     ++T  G+V++ G    G+LGHG   D + PK+++  + 
Sbjct: 200 TEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEG 259

Query: 285 IN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEGIHV 342
           +  V  VA G  +T AVT  G +Y++G  +C    LGHG++     P+ +       IHV
Sbjct: 260 LAPVVQVAAGASYTFAVTDDGTVYSFG--SCTNFCLGHGDQHDELRPRAIQSFKRRNIHV 317

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
             VS G  H   + + G ++T+G G  G LGHGD    ++P  + SLK    V+      
Sbjct: 318 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKR 377

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK---EARLVPTCVAALVEPNFC 459
            T  + +             G +F +G    G LG  D+   +  + P  + +L +    
Sbjct: 378 KTFVLTD------------EGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVS 425

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEI 513
           Q+S G   TVA+T  G V+  G     QLG     G L PT +   + +  +EEI
Sbjct: 426 QISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEI---MFQKSMEEI 477



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 108/237 (45%), Gaps = 28/237 (11%)

Query: 340 IHVSS----VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRT 394
           +H SS    V+ G +HT +V  +  +++ G    GVLGHG D    +    V      R 
Sbjct: 99  VHTSSGNMQVATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRV 157

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAAL 453
           V  +    H A V E+            G++FT GD      GHG+    +  PT + AL
Sbjct: 158 VNISASHNHAAFVTEL------------GEVFTCGDNSSLCCGHGEVGRTIFRPTEIKAL 205

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF---- 509
              +  QV+ G S TV LTT G VYT GS  +GQLG    +G    R   K+ + F    
Sbjct: 206 KGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLG----HGDTIDRATPKIVELFEGLA 261

Query: 510 -VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
            V ++A G  +   +T    VY++G   N  LGHGD  D   P  +++ K + +  +
Sbjct: 262 PVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVV 318


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 169/348 (48%), Gaps = 38/348 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RH+ L+     V S G+   G+LG         P+ I AL+ +NV+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSL 88

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG GS    G +G   E+S + PKK+   L GI +  VSCG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHSLALSK 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             Q+F++G  + G LG G  + S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
            S C  G  F WG    G+L    +   +    P  + AL       +SCG   T  L  
Sbjct: 197 -SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQ 253

Query: 474 TGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTE 528
            G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A + +  +
Sbjct: 254 DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308

Query: 529 VYTWGKGAN--GRLGH-----GDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V ++G G +   +  H     G+ D R   S  E L D QVK I  GT
Sbjct: 309 VISFGHGPSDTSKPTHPEALTGNFDIRCLIS-AEDLVDVQVKHIFAGT 355



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 158/335 (47%), Gaps = 33/335 (9%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDA 281
           +P+ +++   L+V  ++CG  H+  V  +G VF+WG    G+LG G   ++S  PK I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGI 340
           L  I +  V+CG +H+ A++    +++WG +  + G LG G E+ S   P+++   LEGI
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKN--SHGQLGLGKEVPSQASPQRVRS-LEGI 181

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---ISVSTPREVDSLKGLRTVRA 397
            ++ V+ G  H+  ++  G  F +G  + G L    R   +  + P  + +LK L  +  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYI 241

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           +CG  HTA +++             GK+FT+GD   G+LG+     +  P  V   ++  
Sbjct: 242 SCGDEHTAVLIQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDGL 288

Query: 458 FCQVSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 516
             Q+ CG   T+A   TTG V + G         P    K PT  E  LT NF  +I C 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVISFGH-------GPSDTSK-PTHPEA-LTGNF--DIRCL 337

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
                ++  + +    G  AN    H DT     P
Sbjct: 338 ISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTGAP 372



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 148/291 (50%), Gaps = 25/291 (8%)

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
           A GE H+  +  +  + + G ++   G LG        LP+ +   LE ++V  VSCG  
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNS--RGQLGRRRAPRGELPEPIQA-LETLNVDLVSCGKE 85

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVE 409
           H+  V   G++F +G G+ G LG G+   +S TP+++ +L G++ ++ +CG +H+ A+ +
Sbjct: 86  HSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLT 468
                         ++F+WG    G+LG G +  ++  P  V +L      QV+ G + +
Sbjct: 146 ------------DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHS 193

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT----KNF-VEEIACGDYHVAVL 523
            AL+  G  +  GS   GQL     N  +P +    L+    KN  V  I+CGD H AVL
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRN--VPVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
               +V+T+G  ++G+LG+  T ++  P LVE + D  V  I CG+  T A
Sbjct: 252 IQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLA 301



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 132/271 (48%), Gaps = 31/271 (11%)

Query: 164 DTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV 223
           +T  V L S     S    H      G VF WG    +G LG G          K  SF 
Sbjct: 73  ETLNVDLVSCGKEHSLAVCHK-----GRVFAWG-AGSEGQLGIG--------EFKEISFT 118

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           PK + +   + +  ++CG  H+  ++K  +VFSWG+   G+LG G  V S  S P+ + +
Sbjct: 119 PKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQAS-PQRVRS 177

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGI 340
           L+ I +  VA G  H+ A++L G  + WG SN    L   G  + +   K L+ G L+ +
Sbjct: 178 LEGIPLAQVAAGGAHSFALSLCGTSFGWG-SNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            V  +SCG  HTAV+   G++FTFGD + G LG+        P+ V+ + GL + +  CG
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCG 295

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
            +HT A V            ++G++ ++G G
Sbjct: 296 SYHTLAYVH-----------TTGQVISFGHG 315



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   ++P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EVPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  + G+L   G       N P  + ALK+  V  I CG  
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDE 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251


>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
          Length = 677

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 171/354 (48%), Gaps = 59/354 (16%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  S +S P  I ALK   V+L ACG +HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGN--------EMSLWLPKKLNGPLEGIHVSSVSCGP 349
              T +G +Y  GG+N   G LG G+        ++  + P  +        +  +S G 
Sbjct: 138 LVSTDTGGVYAAGGNNE--GQLGLGDTDDRDTFHQIGFFTPSDI--------IKQLSAGA 187

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             +A +T  G+LF +GD + G +G  ++ +V  P EV   K +  +  +CG +H+A V  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV----PTCVAALVEPNFCQVSCGH 465
                      + G+L+T+G+ + G+LG  ++   L+    P  V  + +    QV+CG 
Sbjct: 245 -----------TDGELYTFGEPENGKLGLPNQ--LLINHRSPQRVLGIPD-KVIQVACGG 290

Query: 466 SLTVALTTTGHVYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNFVEEIACG 516
             TV LT    VY  G   +GQLG         +PK        +  ++    +  I+CG
Sbjct: 291 GHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPK--------IIDRIKDQKISHISCG 341

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           + H A++T    +YT+G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 342 ENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 157/335 (46%), Gaps = 35/335 (10%)

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           +LV   G VF++G+    +    + S           KN     ++CG+ HT  VT +  
Sbjct: 44  SLVPDTGAVFTFGKT---KFAENIPSKF-------WFKNDVPICLSCGDEHTAIVTGNNK 93

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG  HT V T  G ++  G
Sbjct: 94  LYMFGSNN--WGQLGLGSKSAISKPTCIKA-LKPEKVKLAACGRNHTLVSTDTGGVYAAG 150

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGSSSSSNCSSGK 424
               G LG GD     T  ++        ++  + G   +AA+ E             GK
Sbjct: 151 GNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTE------------DGK 198

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           LF WGD   G++G  +K    +P  V   V      +SCG+  +  +TT G +YT G P 
Sbjct: 199 LFMWGDNSEGQIGLKNKSNVCIPHEVT--VGKPISWISCGYYHSAFVTTDGELYTFGEPE 256

Query: 485 YGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            G+LG P     N + P RV G   K  V ++ACG  H  VLT +  VY +G G  G+LG
Sbjct: 257 NGKLGLPNQLLINHRSPQRVLGIPDK--VIQVACGGGHTVVLTEKV-VYAFGLGQFGQLG 313

Query: 542 HGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G    + + P +++ +KD+++  I CG + TA +
Sbjct: 314 LGTFLFETSEPKIIDRIKDQKISHISCGENHTALM 348



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 149/310 (48%), Gaps = 29/310 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           P  +++     V+  ACG  H  + T  G V++ G    G+LG G   D D  H      
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT 175

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
             +I ++ ++ G + + A+T  G ++ WG ++   G +G  N+ ++ +P ++     G  
Sbjct: 176 PSDI-IKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLKNKSNVCIPHEVT---VGKP 229

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAAC 399
           +S +SCG +H+A VT+ G+L+TFG+   G LG  +++ ++  +P+ V  +   + ++ AC
Sbjct: 230 ISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPD-KVIQVAC 288

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNF 458
           G  HT  + E +V             + +G G  G+LG G        P  +  + +   
Sbjct: 289 GGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKI 335

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIAC 515
             +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L K  V+ IAC
Sbjct: 336 SHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFL-KFTVQLIAC 394

Query: 516 GDYHVAVLTS 525
           G  H+ V  +
Sbjct: 395 GGCHMLVFAT 404



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 18/188 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F+WG+             S    G+K  S V    E  V   +  I+CG  H+A VT
Sbjct: 197 GKLFMWGD------------NSEGQIGLKNKSNVCIPHEVTVGKPISWISCGYYHSAFVT 244

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
             GE++++GE   G+LG      ++H  P+ +  + +  ++ VACG  HT  +T    +Y
Sbjct: 245 TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLT-EKVVY 302

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +G     FG LG G  +      K+   ++   +S +SCG  HTA++T  G ++TFGDG
Sbjct: 303 AFGLG--QFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDG 360

Query: 368 TFGVLGHG 375
             G LG G
Sbjct: 361 RHGKLGLG 368



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 24/150 (16%)

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV---SCGHSLTVALTT-TGHVYTMGSP 483
           WG G  G+         L P  VA  V P   Q+   + G +   +L   TG V+T G  
Sbjct: 7   WGTGGLGQY--------LRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFTFGKT 58

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNFVEE-IACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            + +         +P++      KN V   ++CGD H A++T   ++Y +G    G+LG 
Sbjct: 59  KFAE--------NIPSKF---WFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGL 107

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           G     + P+ ++ALK ++VK   CG + T
Sbjct: 108 GSKSAISKPTCIKALKPEKVKLAACGRNHT 137


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 149/302 (49%), Gaps = 29/302 (9%)

Query: 283  KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS---LWLPKKLNGPLEG 339
            K IN  ++ CG  HT A+  +G +YTWG +    G LG G  MS   L  P  L    + 
Sbjct: 822  KKIN-SVLNCGYGHT-ALIRNGTIYTWGQTV--KGCLGQGPTMSRHSLPSPISLLNCFK- 876

Query: 340  IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
            + V  V+CG  HT  +T+ G ++ +G   +G LG GD      PR + SL     +  +C
Sbjct: 877  LEVLYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSC 935

Query: 400  GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
            G +HT A+ E             G++F WG G  G+LG G+ + + +P CV  L +    
Sbjct: 936  GQFHTLALTE------------KGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIK 983

Query: 460  QVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG------KLTKNFVEE 512
             ++ GH  ++ L+  G +++ GS V+GQLG        +P  ++G       +   +   
Sbjct: 984  DIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHS 1043

Query: 513  IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
            I+CG +H A+LT    VYTWG+  +G+LG+G   +   P+ +      +   I CG  FT
Sbjct: 1044 ISCGCHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQINE-NTFKADCISCGCEFT 1102

Query: 573  AA 574
            AA
Sbjct: 1103 AA 1104



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 152/315 (48%), Gaps = 31/315 (9%)

Query: 238  IACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVEL--VACGE 294
            + CG  H AL+ + G +++WG+ + G LG G   S  S P  I  L    +E+  VACG+
Sbjct: 828  LNCGYGHTALI-RNGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLEVLYVACGK 886

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
            +HT A+T +G +Y WG S   +G LG G+      P +L   L   +V ++SCG +HT  
Sbjct: 887  NHTTALTNNG-VYAWGCS--KYGQLGLGDVYESPYP-RLITSLANENVITLSCGQFHTLA 942

Query: 355  VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
            +T  GQ+F +G G  G LG G+      P  V+ LK       A G  H+  + +     
Sbjct: 943  LTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSD----- 997

Query: 415  SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP-------NFCQVSCGHSL 467
                    G++F++G G  G+LG G+     VP  +  + E         F  +SCG   
Sbjct: 998  -------KGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHH 1050

Query: 468  TVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            +  LT +G VYT G  + GQLG+        PT++     K   + I+CG    A    +
Sbjct: 1051 SALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQINENTFK--ADCISCGCEFTAAQEKQ 1108

Query: 527  T-EVYTWGKGANGRL 540
            T +++ WG  + G++
Sbjct: 1109 TGKIFCWGSNSVGQV 1123



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 30/263 (11%)

Query: 180  GSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIA 239
            G  H    +   V+ WG C+  G LG G      Y         P+ + S    +V  ++
Sbjct: 885  GKNHTTALTNNGVYAWG-CSKYGQLGLGDVYESPY---------PRLITSLANENVITLS 934

Query: 240  CGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA 299
            CG  H   +T++G+VF+WG  + G+LG G   D   P  ++ LK+  ++ +A G  H+  
Sbjct: 935  CGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLV 994

Query: 300  VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI------HVSSVSCGPWHTA 353
            ++  G ++++G     FG LG GN     +P  + G  E I      +  S+SCG  H+A
Sbjct: 995  LSDKGQIFSFGSG--VFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSA 1052

Query: 354  VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            ++T +G ++T+G    G LG+G    V+ P +++     +    +CG   TAA  +    
Sbjct: 1053 LLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQINE-NTFKADCISCGCEFTAAQEK---- 1107

Query: 414  SSSSSNCSSGKLFTWGDGDRGRL 436
                    +GK+F WG    G++
Sbjct: 1108 -------QTGKIFCWGSNSVGQV 1123



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 9/120 (7%)

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGD--PKANGKLPTRVEGKLTKNF---VEEIAC 515
           ++CG+  T AL   G +YT G  V G LG     +   LP+ +   L   F   V  +AC
Sbjct: 828 LNCGYGHT-ALIRNGTIYTWGQTVKGCLGQGPTMSRHSLPSPIS--LLNCFKLEVLYVAC 884

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G  H   LT+   VY WG    G+LG GD  +  +P L+ +L ++ V ++ CG   T A+
Sbjct: 885 GKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSCGQFHTLAL 943


>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
           leucogenys]
          Length = 814

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 167/345 (48%), Gaps = 39/345 (11%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +++CG  H+A+VT   +++ +G    G+LG G  S VS P  + ALK   V+L ACG +H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G++Y  GG+  N G LG G+         ++       +  +S G   +A +T
Sbjct: 99  TLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-------- 206

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
               + G+L+ +G+ + G+LG  ++       P  V+ + E    QV+CG   TV LT  
Sbjct: 207 ----TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTEN 261

Query: 475 GHVYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             VYT G   +GQLG         DPK        V   +    +  I+CG+ H A++T 
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSDPK--------VIENIRDQTISYISCGESHTALITD 312

Query: 526 RTEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
              +YT+G G +G+LG G  +  N   P+L        VK + CG
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACG 357



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 150/309 (48%), Gaps = 27/309 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + +   +I    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G ++ WG +  + G +G  N  ++ +P+++     G  V
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDN--SEGQIGLKNVTNVCVPQQVTI---GKPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+ FG+   G LG  +++  +  TP+ V  +   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  +  + +    
Sbjct: 252 GEHTVVLTENAV-------------YTFGLGQFGQLGLGTFLFETSDPKVIENIRDQTIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            +SCG S T  +T  G +YT G   +G+LG   +   N  +PT      ++  V+ +ACG
Sbjct: 299 YISCGESHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLC-SNFSRFIVKLVACG 357

Query: 517 DYHVAVLTS 525
             H+ V  +
Sbjct: 358 GCHMVVFAA 366



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 122/269 (45%), Gaps = 46/269 (17%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTG----------HLKGLSGDTFRV 168
           P KV L   +ACG  ++L S          G ++G+ G          H+        ++
Sbjct: 86  PEKVKL---AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI 142

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
              SA S++S     D     G +F+WG+             S    G+K  + V    +
Sbjct: 143 KQLSAGSNTSAALTED-----GRLFMWGD------------NSEGQIGLKNVTNVCVPQQ 185

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNIN 286
             +   V  I+CG  H+A VT  GE++ +GE   G+LG  + +  +   P+L+  +    
Sbjct: 186 VTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           ++ VACG  HT  +T +  +YT+G     FG LG G  +      K+   +    +S +S
Sbjct: 246 IQ-VACGGEHTVVLTENA-VYTFGLG--QFGQLGLGTFLFETSDPKVIENIRDQTISYIS 301

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           CG  HTA++T  G ++TFGDG  G LG G
Sbjct: 302 CGESHTALITDIGLMYTFGDGRHGKLGLG 330



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G     + P+ V+ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99


>gi|299117183|emb|CBN75147.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1991

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 157/342 (45%), Gaps = 56/342 (16%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV--AC 292
            V  +ACG RH+ALVT  G V + G    GRLGHG + D   PK++ AL +    +V   C
Sbjct: 1596 VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQAVVWAGC 1655

Query: 293  GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE-GIHVSSVSCGPWH 351
            G  HT     SG +Y+WG        LG  +  ++  P+++      G+ ++ VSCG  H
Sbjct: 1656 GREHTLVALASGSVYSWGWGEGGRLGLGEVD--AVLSPRRVEEFDNLGVRITRVSCGREH 1713

Query: 352  TAVVTSAGQLFTFGDGTFGVLGHGDRI---SVSTPREVDS--LKGLRTVRAACGVWHTAA 406
            +  V+ AG+L+ FG    G LG    +    VS PR V +  L   R V AA G  H++ 
Sbjct: 1714 SLAVSDAGRLYAFGPSDGGRLGFKAVVGTGGVSAPRIVRAPCLAEERVVAAAGGQMHSSC 1773

Query: 407  VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH---------------GDKEARLVPTCVA 451
            V            C+SGK+FTWG G  G LGH               G  EAR  P    
Sbjct: 1774 V------------CASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDEARSAPQGAG 1821

Query: 452  ALVEPN----FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEG---- 503
               +P+       V+CG   T+ LT  G V+  G    GQLG     G+  +R       
Sbjct: 1822 EQDDPDADILATSVACGAWHTLVLTKAGKVHAFGDGFTGQLGLEDRGGEKESRALSPRVV 1881

Query: 504  KLTKN-----------FVEEIACGDYHVAVLTSRTEVYTWGK 534
            ++ +N           +V E+ACG +  AV++S   +Y WGK
Sbjct: 1882 RIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGK 1923



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 149/335 (44%), Gaps = 68/335 (20%)

Query: 216  GVKMDSFVPKAVESAVVLDVQNIA----CGGRHAALVTKQGEVFSWGEELGGRLGHGVDS 271
            G + D+  PK V +  + D +       CG  H  +    G V+SWG   GGRLG G   
Sbjct: 1629 GDEEDALEPKVVRA--LADTKQAVVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVD 1686

Query: 272  DVSHPKLIDALKNINVEL--VACGEHHTCAVTLSGDMYTWG---GSNCNF-GLLGHGNEM 325
             V  P+ ++   N+ V +  V+CG  H+ AV+ +G +Y +G   G    F  ++G G   
Sbjct: 1687 AVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFGPSDGGRLGFKAVVGTGGVS 1746

Query: 326  SLWLPKKLNGP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 384
            +   P+ +  P L    V + + G  H++ V ++G++FT+G G+ G LGHG      TPR
Sbjct: 1747 A---PRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPR 1803

Query: 385  EV-------------------DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
             V                   D    +     ACG WHT  + +            +GK+
Sbjct: 1804 MVSGFGRDEARSAPQGAGEQDDPDADILATSVACGAWHTLVLTK------------AGKV 1851

Query: 426  FTWGDGDRGRLG----HGDKEAR-LVPTCVAALVEPN------------FCQVSCGHSLT 468
              +GDG  G+LG     G+KE+R L P  V   +E N              +V+CG   +
Sbjct: 1852 HAFGDGFTGQLGLEDRGGEKESRALSPRVVR--IERNAGGGGGSPGDVYVTEVACGSFSS 1909

Query: 469  VALTTTGHVYTMGSPVYGQLGDPKANGK--LPTRV 501
              +++ G++Y  G P      DP A+ +  LP RV
Sbjct: 1910 AVVSSEGNLYHWGKPDAFSDDDPVADKRYLLPRRV 1944



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 110/233 (47%), Gaps = 21/233 (9%)

Query: 341  HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR--TVRAA 398
             V  V+CG  H+A+VT++G + T G G  G LGHGD      P+ V +L   +   V A 
Sbjct: 1595 QVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQAVVWAG 1654

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEP 456
            CG  HT   +            +SG +++WG G+ GRLG G+ +A L P  V     +  
Sbjct: 1655 CGREHTLVAL------------ASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGV 1702

Query: 457  NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG----KLPTRVEGK-LTKNFVE 511
               +VSCG   ++A++  G +Y  G    G+LG     G      P  V    L +  V 
Sbjct: 1703 RITRVSCGREHSLAVSDAGRLYAFGPSDGGRLGFKAVVGTGGVSAPRIVRAPCLAEERVV 1762

Query: 512  EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKS 564
              A G  H + + +  +V+TWG G+ G LGHG  +D   P +V      + +S
Sbjct: 1763 AAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDEARS 1815



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 3/72 (4%)

Query: 497  LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
            LP R+    T+  V ++ACG  H A++T+   V T G G  GRLGHGD +D   P +V A
Sbjct: 1586 LPLRIP---TEWQVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRA 1642

Query: 557  LKDKQVKSIVCG 568
            L D +   +  G
Sbjct: 1643 LADTKQAVVWAG 1654


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 119/214 (55%), Gaps = 15/214 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACG 293
           +  I CG  H+  ++K GE+F+WG+ L G+LG G + + +  P+L++ L  + +  ++ G
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 438

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           + H+ A+++SG++Y+WG ++     LGH N         L   L+   V  ++CG  HTA
Sbjct: 439 KAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDF---PSLIEALDNQKVEFLACGGSHTA 495

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++T  G +FTFG G +G LGH    +   PR V  L G R  + ACG WHT A V  +  
Sbjct: 496 LLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDL-- 553

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                    GK+F++G G  G+LG+G    +L+P
Sbjct: 554 ---------GKVFSFGSGKEGQLGNGGTHNQLIP 578



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 118/224 (52%), Gaps = 14/224 (6%)

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACG 400
           +  ++CG +H+  ++  G+LF +G    G LG G    S+ TP+ V+ L G+  V+ + G
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 438

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             H+ A+              SG +++WG  D G+LG G       P+ + AL       
Sbjct: 439 KAHSMAL------------SMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEF 486

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH- 519
           ++CG S T  LT  G V+T G+  YGQLG      +L  R+  +L  N V ++ACG +H 
Sbjct: 487 LACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHT 546

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
           +A ++   +V+++G G  G+LG+G T ++  P  ++   ++++K
Sbjct: 547 LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELK 590



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 13/187 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+    G LG G      +  +      P+ VE    + +  I+ G  H+  ++
Sbjct: 396 GELFAWGQNL-HGQLGVG----RLFTSIP----TPQLVEHLSGVPLVQISAGKAHSMALS 446

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G ++SWG    G+LG G  +    P LI+AL N  VE +ACG  HT  +T  G ++T+
Sbjct: 447 MSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTF 506

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G     +G LGH +  +   P +L   L G  V+ V+CG WHT A V+  G++F+FG G 
Sbjct: 507 GAG--KYGQLGHNSTQNELRP-RLVTELAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGK 563

Query: 369 FGVLGHG 375
            G LG+G
Sbjct: 564 EGQLGNG 570



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 27/266 (10%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           + + ++  G  H  +++  G+ F +            +  + H +    L+  ++  + C
Sbjct: 337 MKIHSVDQGAEHMLILSSDGKPFEY------------NYSIEHARFQCILQEKSIIQITC 384

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G++H+ A++  G+++ W G N + G LG G   +     +L   L G+ +  +S G  H+
Sbjct: 385 GDYHSLALSKGGELFAW-GQNLH-GQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHS 442

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             ++ +G ++++G    G LG G       P  +++L   +    ACG  HTA + +   
Sbjct: 443 MALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTK--- 499

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA-L 471
                     G +FT+G G  G+LGH   +  L P  V  L      QV+CG   T+A +
Sbjct: 500 ---------DGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYV 550

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKL 497
           +  G V++ GS   GQLG+   + +L
Sbjct: 551 SDLGKVFSFGSGKEGQLGNGGTHNQL 576



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 27/237 (11%)

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           + + SV  G  H  +++S G+ F +              S+   R    L+    ++  C
Sbjct: 337 MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQITC 384

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNF 458
           G +H+ A+               G+LF WG    G+LG G     +  P  V  L     
Sbjct: 385 GDYHSLAL------------SKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPL 432

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGD 517
            Q+S G + ++AL+ +G++Y+ G    GQLG    NG+  P+ +E  L    VE +ACG 
Sbjct: 433 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA-LDNQKVEFLACGG 491

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            H A+LT    V+T+G G  G+LGH  T +   P LV  L   +V  + CG   T A
Sbjct: 492 SHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLA 548



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 5/147 (3%)

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           DG      +  + AR    C+  L E +  Q++CG   ++AL+  G ++  G  ++GQLG
Sbjct: 355 DGKPFEYNYSIEHARF--QCI--LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLG 410

Query: 490 DPKANGKLPT-RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
             +    +PT ++   L+   + +I+ G  H   L+    +Y+WG+   G+LG G T+  
Sbjct: 411 VGRLFTSIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGE 470

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +FPSL+EAL +++V+ + CG S TA +
Sbjct: 471 DFPSLIEALDNQKVEFLACGGSHTALL 497


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 181/374 (48%), Gaps = 37/374 (9%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           VF WG  + DG L  G     S          PK V     LD++ I+CG +H  +VTK 
Sbjct: 4   VFGWGR-SNDGQLSIGFSEETSILS-------PKEVSRLQELDIKEISCGEKHTLIVTKD 55

Query: 252 GEVFSWGEELGGRLGH------GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           G+++S G    G LGH       V  DV   +L+ +L ++ V   A G   +  +T +G+
Sbjct: 56  GKLYSCGSNEYGELGHSKPRSRAVSIDVV--ELVSSLSSMQVIQAAGGSEFSLVITTAGE 113

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPK-KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           +++WG ++   G LG G        K KL   L    V  ++CG  H   +T  G+LF++
Sbjct: 114 VFSWGRNDK--GQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSW 171

Query: 365 GDGTFGVLGHGDRISV-STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           G   +G LG G   S   TP+++  L+G+   + A G            G+ S     S 
Sbjct: 172 GCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASG------------GNHSFILTWSR 219

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            +F WG    G+LG  D+  +  PT   +L       +SCG   TVALT  G V++ G+ 
Sbjct: 220 AVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAG 279

Query: 484 VYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLG 541
            +GQLG +   N  LP RV  +L  + + ++ACG  H VA   S  ++Y +G G +G+LG
Sbjct: 280 GFGQLGHNSTQNEILPKRVM-ELMGSVISQVACGRRHTVAFSPSSGKMYAFGSGGSGQLG 338

Query: 542 HGDTDDRN--FPSL 553
            GDT  RN  FP L
Sbjct: 339 LGDTSARNSPFPIL 352



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 20/277 (7%)

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           ++ WG SN     +G   E S+  PK+++  L+ + +  +SCG  HT +VT  G+L++ G
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSR-LQELDIKEISCGEKHTLIVTKDGKLYSCG 62

Query: 366 DGTFGVLGHGD----RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
              +G LGH       +S+     V SL  ++ ++AA G   +  +             +
Sbjct: 63  SNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVIT------------T 110

Query: 422 SGKLFTWGDGDRGRLGHGD--KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
           +G++F+WG  D+G+LG G   KE    P  + +L      Q++CG +  +ALT  G +++
Sbjct: 111 AGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFS 170

Query: 480 MGSPVYGQLGDPKANGKLPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANG 538
            G   YGQLG   ++    T  +    +   + +IA G  H  +LT    V+ WGK + G
Sbjct: 171 WGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFG 230

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG  D  D++ P+L ++L++++V  I CG   T A+
Sbjct: 231 QLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVAL 267



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 146/330 (44%), Gaps = 22/330 (6%)

Query: 254 VFSWGEELGGRLGHGVDSDVS--HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           VF WG    G+L  G   + S   PK +  L+ ++++ ++CGE HT  VT  G +Y+ G 
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63

Query: 312 SNCNFGLLGHGNEMSLWLP---KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           +   +G LGH    S  +     +L   L  + V   + G   + V+T+AG++F++G   
Sbjct: 64  NE--YGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRND 121

Query: 369 FGVLGHGD--RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            G LG G   +     P+ + SL     V+  CG  H  A+ +             G+LF
Sbjct: 122 KGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTD------------DGRLF 169

Query: 427 TWGDGDRGRLGHGDKEA-RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           +WG    G+LG G   +    P  +  L      Q++ G + +  LT +  V+  G   +
Sbjct: 170 SWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSF 229

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           GQLG      K    +   L    V  I+CG+ H   LT    V+++G G  G+LGH  T
Sbjct: 230 GQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNST 289

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +   P  V  L    +  + CG   T A 
Sbjct: 290 QNEILPKRVMELMGSVISQVACGRRHTVAF 319



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 13/176 (7%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F WG C   G LG G   S S+         P+ +     + +  IA GG H+ ++T
Sbjct: 166 GRLFSWG-CNKYGQLGLG--SSHSFHDT------PQQIVCLRGIPIAQIASGGNHSFILT 216

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
               VF WG+   G+LG   + D SHP L  +L+N  V  ++CGE HT A+T  G ++++
Sbjct: 217 WSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSF 276

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT-SAGQLFTF 364
           G     FG LGH +  +  LPK++   L G  +S V+CG  HT   + S+G+++ F
Sbjct: 277 GAG--GFGQLGHNSTQNEILPKRVM-ELMGSVISQVACGRRHTVAFSPSSGKMYAF 329


>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
          Length = 1126

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 136/274 (49%), Gaps = 28/274 (10%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L++  +  +ACG HHT  +  +  +Y++G      GLLG+ +   + +P++LN   + + 
Sbjct: 18  LQDKEIIYIACGHHHTLIIDENNQLYSFGMGKT--GLLGNEHLEDVKIPQQLNLKQKFVQ 75

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V+   CG  H+  +T +G +F++G    G LGHG++     P+EV     +      CG 
Sbjct: 76  VA---CGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQ-NDIIAEYIDCGD 131

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            H+A V              + +L+TWG+G   RLGHG     L+P  V  L +     V
Sbjct: 132 QHSAFV------------SKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHV 179

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF-----VEEI 513
           SCG + T+ +T  G VY  G  +YG+LG   D K    LPTRV G + K F       ++
Sbjct: 180 SCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQT-LPTRV-GMICKKFRKNKMYYQV 237

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           A G  H   L++  +++TWG   +G LG G   D
Sbjct: 238 AAGSMHSLALSTNGQIFTWGSSKSGNLGIGYNKD 271



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 141/282 (50%), Gaps = 29/282 (10%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           IACG  H  ++ +  +++S+G    G LG+    DV  P+ ++ LK   V+ VACG  H+
Sbjct: 26  IACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLN-LKQKFVQ-VACGATHS 83

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+T+SG +++W G N   G LGHGN+     PK++      I    + CG  H+A V+ 
Sbjct: 84  LALTISGIIFSW-GKNLR-GQLGHGNQNDCLKPKEV--IQNDIIAEYIDCGDQHSAFVSK 139

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
             +L+T+G+G +  LGHG       P++V  L+       +CG+ HT  V          
Sbjct: 140 NKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVT--------- 190

Query: 418 SNCSSGKLFTWGDGDRGRLG-HGDKEARLVPTCVAALVE-----PNFCQVSCGHSLTVAL 471
                G ++ WGDG  G+LG   D + + +PT V  + +       + QV+ G   ++AL
Sbjct: 191 ---GEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLAL 247

Query: 472 TTTGHVYTMGSPVYGQLG-----DPKANGKLPTRVEGKLTKN 508
           +T G ++T GS   G LG     D +     P ++  KL K+
Sbjct: 248 STNGQIFTWGSSKSGNLGIGYNKDIQDYYTQPQKISIKLNKD 289



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 19/189 (10%)

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
           L+    +  ACG  HT  + E            + +L+++G G  G LG+   E   +P 
Sbjct: 18  LQDKEIIYIACGHHHTLIIDE------------NNQLYSFGMGKTGLLGNEHLEDVKIPQ 65

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN 508
            +   ++  F QV+CG + ++ALT +G +++ G  + GQLG    N  L  +   ++ +N
Sbjct: 66  QLN--LKQKFVQVACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPK---EVIQN 120

Query: 509 --FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
               E I CGD H A ++   E+YTWG G   RLGHG T D   P  V  L+D  V  + 
Sbjct: 121 DIIAEYIDCGDQHSAFVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVS 180

Query: 567 CGTSFTAAI 575
           CG + T  +
Sbjct: 181 CGMNHTLIV 189



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 173/430 (40%), Gaps = 66/430 (15%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F WG+    G LG G            D   PK V    ++  + I CG +H+A V+
Sbjct: 90  GIIFSWGK-NLRGQLGHGNQN---------DCLKPKEVIQNDII-AEYIDCGDQHSAFVS 138

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           K  E+++WG     RLGHGV +D   PK +  L++  V  V+CG +HT  VT  G +Y W
Sbjct: 139 KNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAW 198

Query: 310 GGSNCNFGLLGHGNE-MSLWLPKKLNGPLEGIH----VSSVSCGPWHTAVVTSAGQLFTF 364
           G     +G LG   +  +  LP ++    +          V+ G  H+  +++ GQ+FT+
Sbjct: 199 GDG--MYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTW 256

Query: 365 GDGTFGVLGHG------------DRISVSTPREVD-SLKGLRTVRAACGVWHTAAVVEVM 411
           G    G LG G             +IS+   ++ +     L+  +A      T A     
Sbjct: 257 GSSKSGNLGIGYNKDIQDYYTQPQKISIKLNKDKNLQFFSLQYYQAELNNKLTKAKNNNK 316

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE--ARLVPTCVAALVEPNFCQVSCGHSLTV 469
              + + +  + ++  +   D   L   DK+   R  P+ +       FCQ S  +S  +
Sbjct: 317 NQINLNDSLDNIEVIQFK-IDMYPLYIIDKQLIQRGPPSNII------FCQASQNNSFFL 369

Query: 470 ALTTTGHVYTMGSPVYG--------------QLGDPKANGKLPTRVEG--------KLTK 507
           A    G ++  GS   G              Q    K   ++ T +              
Sbjct: 370 A--NNGQIFACGSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTDLNDFNRPFQIQYFKN 427

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF--PSLVEALKDKQVKSI 565
           N +  I+C   H   ++ + + Y WGK    +LG G + + N+    L   L+ K +   
Sbjct: 428 NIIRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMS 487

Query: 566 VCGTSFTAAI 575
            C   F+A +
Sbjct: 488 ACSDKFSALL 497



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/374 (23%), Positives = 150/374 (40%), Gaps = 71/374 (18%)

Query: 236 QNIACGGRHAALVTKQGEVFS--WGEELGGRLGHGVDSDVS---HPKLIDALKNINVELV 290
           Q  ACG     +   Q  + S    ++   +  + +D+D++    P  I   KN  +  +
Sbjct: 374 QIFACGSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTDLNDFNRPFQIQYFKNNIIRYI 433

Query: 291 ACGEHHTCAVTLSGDMYTWG---------GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           +C   H  A++  G  Y WG         G +CN+           ++P+KL G LE   
Sbjct: 434 SCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYN----------YIPQKLQGILETKT 483

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--ISVSTPREVDSLKGLRTVRAAC 399
           +   +C    +A++T  G+++TFG    GVLGH ++    V  P+ V+ +   + +  AC
Sbjct: 484 IIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDIP--QMIYIAC 541

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG-------------HGDKEARLV 446
           G        + MV  S+       +L+ WG+   G+LG               DK  +  
Sbjct: 542 G-------PQGMVSISAHKR----QLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQ 590

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY-GQ-----LGDPKA--NGKLP 498
                   E     V  G   +VA+   G +Y+ G  +Y GQ     + D K   +  + 
Sbjct: 591 NNEQIKPEEVQIKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDAKGIDDQFIL 650

Query: 499 TRVEGKLTKNFVEEIACGDYHVAVLT--------SRTEVYTWGKGANGRLGHGDTDDRNF 550
            R      + F+ +++C +YH   L+        ++  VY WG    G L   ++ D   
Sbjct: 651 IRTNELQNQQFI-QVSCSEYHTLALSIQEQGEEQAQQYVYAWGLCNLGNLIFENSQD--I 707

Query: 551 PSLVEALKDKQVKS 564
               + LK K  KS
Sbjct: 708 VKYYQQLKQKPQKS 721



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 82/377 (21%), Positives = 150/377 (39%), Gaps = 81/377 (21%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVAC 292
           ++ I+C   HA  ++++G+ + WG+ +  +LG G   + ++   KL   L+   + + AC
Sbjct: 430 IRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSAC 489

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL---PKKLNGPLEGIHVSSVSCGP 349
            +  +  +T  G+++T+G S+C  G+LGH  E + ++   PK +N   + I+   ++CGP
Sbjct: 490 SDKFSALLTDKGEVWTFGTSDC--GVLGH-QEKNYYVVPEPKMVNDIPQMIY---IACGP 543

Query: 350 WHTAVVTS-AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG-------------LRTV 395
                +++   QL+ +G+  +G LG     +     E D  K              ++  
Sbjct: 544 QGMVSISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKPEEVQIK 603

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
               G++H+ A+       S      SG+   +   D   +   D +  L+ T    L  
Sbjct: 604 SVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDAKGI---DDQFILIRT--NELQN 658

Query: 456 PNFCQVSCGHSLTVALTT--------TGHVYTMG---------------SPVYGQLGD-- 490
             F QVSC    T+AL+           +VY  G                  Y QL    
Sbjct: 659 QQFIQVSCSEYHTLALSIQEQGEEQAQQYVYAWGLCNLGNLIFENSQDIVKYYQQLKQKP 718

Query: 491 -----------------PKANGKL--------PTR-VEGKLTKNFVEEIACGDYHVAVLT 524
                            P  N  L        P R +  +  K  ++ ++ G +H   + 
Sbjct: 719 QKSQDLNKYISQKQILLPPTNISLIQKFILTNPDREIINEFYKKSIKYVSAGIFHNIAIG 778

Query: 525 SRTEVYTWGKGANGRLG 541
           S  + + WG   NG+LG
Sbjct: 779 SDGKCFVWGSFQNGKLG 795


>gi|198435791|ref|XP_002121699.1| PREDICTED: similar to NEK (NEver in mitosis Kinase) Like family
           member (nekl-1) [Ciona intestinalis]
          Length = 1265

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 142/304 (46%), Gaps = 31/304 (10%)

Query: 285 INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 344
           + +  VA G +H   VT    +Y+WG +   +G LGHG+   +  P  +   L+G  +++
Sbjct: 581 VKIRQVAVGTNHVVVVTTERVVYSWGENA--YGQLGHGHLEPVAKPHVIEA-LKGKPITT 637

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
            SCG   +  VT  G L T GDG+ G LG G+  S + P  V+ L  +     ACG  H 
Sbjct: 638 TSCGSNFSVFVTDNGILLTCGDGSQGCLGQGNLSSTTRPSMVEPLLSVDVSTVACGDAHV 697

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
            A+             S G+++ WG G +GRLG G  +  + P  VA  +      V CG
Sbjct: 698 VAL------------SSEGEIYAWGCGSQGRLGTGHDDHCIEPHRVA--INQAIRDVRCG 743

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL--------PTRVEGKLTKNFVE----- 511
           H  T+ +T  G +   G+  Y +LG  +  G +         T VE + T   V+     
Sbjct: 744 HDGTMFITDVGTLLACGNNQYNKLGLNERTGFIMMFNNRLKKTEVECRKTPTVVKSIKGV 803

Query: 512 -EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
            ++A G +H  VLT   +V   G    G++G GD   R  P LV+ +KD  V  + CG +
Sbjct: 804 VDVAMGRHHTTVLTESNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKDYDVMVVACGNT 863

Query: 571 FTAA 574
           +TA 
Sbjct: 864 YTAV 867



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 149/312 (47%), Gaps = 25/312 (8%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           + ++ +A G  H  +VT +  V+SWGE   G+LGHG    V+ P +I+ALK   +   +C
Sbjct: 581 VKIRQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPHVIEALKGKPITTTSC 640

Query: 293 GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           G + +  VT +G + T G GS    G LG GN  S   P  +  PL  + VS+V+CG  H
Sbjct: 641 GSNFSVFVTDNGILLTCGDGSQ---GCLGQGNLSSTTRPSMVE-PLLSVDVSTVACGDAH 696

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
              ++S G+++ +G G+ G LG G       P  V   + +R VR  CG  H   +    
Sbjct: 697 VVALSSEGEIYAWGCGSQGRLGTGHDDHCIEPHRVAINQAIRDVR--CG--HDGTMFITD 752

Query: 412 VGSSSSSNCSSGKLFTWGDGDR--------GRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           VG+  +  C + +    G  +R         RL   + E R  PT V ++       V+ 
Sbjct: 753 VGTLLA--CGNNQYNKLGLNERTGFIMMFNNRLKKTEVECRKTPTVVKSI--KGVVDVAM 808

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTR-VEGKLTKNF-VEEIACGDYHVA 521
           G   T  LT +  V  +GS   GQ+G    + KL T     K  K++ V  +ACG+ + A
Sbjct: 809 GRHHTTVLTESNQVLMLGSNKEGQMG--TGDNKLRTSPYLVKCIKDYDVMVVACGNTYTA 866

Query: 522 VLTSRTEVYTWG 533
           V TS   V  WG
Sbjct: 867 VGTSNNIVLYWG 878



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 41/278 (14%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  +E+     +   +CG   +  VT  G + + G+   G LG G  S  + P +++ L 
Sbjct: 624 PHVIEALKGKPITTTSCGSNFSVFVTDNGILLTCGDGSQGCLGQGNLSSTTRPSMVEPLL 683

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH- 341
           +++V  VACG+ H  A++  G++Y WG GS    G LG G++     P ++      I+ 
Sbjct: 684 SVDVSTVACGDAHVVALSSEGEIYAWGCGSQ---GRLGTGHDDHCIEPHRV-----AINQ 735

Query: 342 -VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV----------------STPR 384
            +  V CG   T  +T  G L   G+  +  LG  +R                    TP 
Sbjct: 736 AIRDVRCGHDGTMFITDVGTLLACGNNQYNKLGLNERTGFIMMFNNRLKKTEVECRKTPT 795

Query: 385 EVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR 444
            V S+KG+  V  A G  HT  + E            S ++   G    G++G GD + R
Sbjct: 796 VVKSIKGV--VDVAMGRHHTTVLTE------------SNQVLMLGSNKEGQMGTGDNKLR 841

Query: 445 LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
             P  V  + + +   V+CG++ T   T+   V   GS
Sbjct: 842 TSPYLVKCIKDYDVMVVACGNTYTAVGTSNNIVLYWGS 879



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 19/212 (8%)

Query: 380 VSTPREVDSLKGLRTVRAACGVWHT--------------AAVVEVMVGSS-SSSNCSSGK 424
           ++T RE +  +   T R+   +++T                + +V VG++      +   
Sbjct: 542 ITTSRESNDRRNHETTRSVLYLYNTFDMHLTPIEGLPSKVKIRQVAVGTNHVVVVTTERV 601

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           +++WG+   G+LGHG  E    P  + AL        SCG + +V +T  G + T G   
Sbjct: 602 VYSWGENAYGQLGHGHLEPVAKPHVIEALKGKPITTTSCGSNFSVFVTDNGILLTCGDGS 661

Query: 485 YGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            G LG    +    P+ VE  L+ + V  +ACGD HV  L+S  E+Y WG G+ GRLG G
Sbjct: 662 QGCLGQGNLSSTTRPSMVEPLLSVD-VSTVACGDAHVVALSSEGEIYAWGCGSQGRLGTG 720

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             D    P  V    ++ ++ + CG   T  I
Sbjct: 721 HDDHCIEPHRVAI--NQAIRDVRCGHDGTMFI 750


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 187/440 (42%), Gaps = 41/440 (9%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G + D   P  V    +  V  +A G  H   V + G V++WG  + G+LG G  ++   
Sbjct: 42  GTRTDRLTPVQVPG--LTGVTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHT 99

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P  +  L  +    +A G  HT AV+  G ++ WG  + ++G LG G       P +L  
Sbjct: 100 PVQVPGLTGVTA--IAAGRRHTFAVSQDGTVWAWG--DNDWGQLGDGTRADRHTPVQLP- 154

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
             E   V++++ G  HT  V   G ++ +GD  +G LG G R +  TP +V  L G+  +
Sbjct: 155 --ELTGVTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTGVTAI 212

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
             A G +HT AV +             G ++ WG+   G+LG G    RL P  V  L  
Sbjct: 213 --AAGDYHTLAVRQ------------DGTVWAWGNNALGQLGDGTYTERLTPVQVPGLT- 257

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA 514
                +S G S TVA+   G V+  G  V+GQLGD     +L P +V G    + V  IA
Sbjct: 258 -GVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPG---LSGVTAIA 313

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G  H   +     V+ WG    G+LG G   DR  P  V  L    V +I  G   T A
Sbjct: 314 EGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDL--TSVTAIAAGDYHTLA 371

Query: 575 I----CLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNP 630
           +     +  W   V   +  G      +  +       GL      ++ +S   +M  + 
Sbjct: 372 VRQDGTVWAWGDNVWGQLGDGT-----YTDRLTPVQVPGLTGVTAIAAGESHTVAMRQD- 425

Query: 631 NKPYRVCDNCFGKLTKATET 650
              +   DN +G+L   T T
Sbjct: 426 GTVWAWGDNVWGQLGDGTYT 445



 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 165/361 (45%), Gaps = 31/361 (8%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G + D   P  V+   +  V  IA G RH   V + G V++WG+   G+LG G  ++   
Sbjct: 142 GTRADRHTP--VQLPELTGVTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLT 199

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P  +  L  +    +A G++HT AV   G ++ WG  N   G LG G       P ++ G
Sbjct: 200 PVQVPGLTGVTA--IAAGDYHTLAVRQDGTVWAWG--NNALGQLGDGTYTERLTPVQVPG 255

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            L G  V+++S G  HT  V   G ++ +GD  +G LG G R    TP +V  L G+  +
Sbjct: 256 -LTG--VTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSGVTAI 312

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
             A G  HT AV +             G ++ WG    G+LG G +  RL P  V  L  
Sbjct: 313 --AEGRRHTFAVRQ------------DGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDLT- 357

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA 514
            +   ++ G   T+A+   G V+  G  V+GQLGD     +L P +V G LT   V  IA
Sbjct: 358 -SVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPG-LTG--VTAIA 413

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G+ H   +     V+ WG    G+LG G   DR  P  V  L    V +I  G   T A
Sbjct: 414 AGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDL--TSVTAIAAGDYHTLA 471

Query: 575 I 575
           +
Sbjct: 472 V 472



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 153/342 (44%), Gaps = 28/342 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V  I+ G  H   V + G V++WG+ + G+LG G  +D   P  +  L  +    +A G 
Sbjct: 259 VTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSGVTA--IAEGR 316

Query: 295 HHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HT AV   G ++ WG    NF G LG G       P ++    +   V++++ G +HT 
Sbjct: 317 RHTFAVRQDGTVWAWG---LNFWGQLGDGTRSDRLTPVQVP---DLTSVTAIAAGDYHTL 370

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            V   G ++ +GD  +G LG G      TP +V  L G+  +  A G  HT A+ +    
Sbjct: 371 AVRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPGLTGVTAI--AAGESHTVAMRQ---- 424

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                    G ++ WGD   G+LG G    RL P  V  L   +   ++ G   T+A+  
Sbjct: 425 --------DGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLT--SVTAIAAGDYHTLAVRQ 474

Query: 474 TGHVYTMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            G V   G   YGQLGD  ++    P  V G         +A GD H   +     V+ W
Sbjct: 475 DGTVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAW 534

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G  A+G+LG G T DR  P  +  L    V +I  G++ T A
Sbjct: 535 GLNASGQLGDGATIDRRIPVQIPGLAG--VTAIAAGSAHTLA 574



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 158/340 (46%), Gaps = 29/340 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           +A G  H   V + G V++WG    G+LG G   D   P  I  L  +    +A G  HT
Sbjct: 515 LAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPGLAGVTA--IAAGSAHT 572

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A    G +++WG ++  +G LG G       P ++ G L G  VS+++ G  H+  +  
Sbjct: 573 LAAGQDGAVWSWGANS--YGQLGDGTTTHRLSPVQVPG-LTG--VSAMAAGDAHSVALLQ 627

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G +  +G  ++G LG G   +  TP +V  L G+  V  A G  HT A+ +        
Sbjct: 628 DGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLTGVTAV--AAGSLHTVALRQ-------- 677

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
                G ++ WG  D G+LG G    RL P  V  L +     ++ G+  TVA+   G V
Sbjct: 678 ----DGTVWAWGYNDLGQLGDGTTTRRLAPVQVQGLTD--VTAIAAGYFHTVAVRQDGTV 731

Query: 478 YTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           +  G  ++GQLGD  +  +  P +V+ +LT   V  +A G  H   +     V+ WG  +
Sbjct: 732 WAWGYNLWGQLGDGSSTARSTPVQVQ-ELTG--VSALAAGYAHTVAVKQDGTVWAWGNNS 788

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
             +LG+G + DR  P  VE L    V ++  G   TAA+ 
Sbjct: 789 GTQLGNGSSTDRYTPVWVEGLTG--VSALTAGRFHTAAVS 826



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 153/342 (44%), Gaps = 29/342 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V     G  H   V + G  ++WG    G+LG G  +D   P  +  L  +    VA G 
Sbjct: 9   VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTGVTA--VAAGR 66

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
           HHT AV   G ++ W G N  +G LG G       P ++ G L G  V++++ G  HT  
Sbjct: 67  HHTFAVRQDGTVWAW-GLNV-WGQLGDGTHTERHTPVQVPG-LTG--VTAIAAGRRHTFA 121

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           V+  G ++ +GD  +G LG G R    TP ++  L G+  +  A G  HT AV +     
Sbjct: 122 VSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTGVTAI--AAGRRHTFAVRQ----- 174

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                   G ++ WGD   G+LG G +  RL P  V  L       ++ G   T+A+   
Sbjct: 175 -------DGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLT--GVTAIAAGDYHTLAVRQD 225

Query: 475 GHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           G V+  G+   GQLGD     +L P +V G LT   V  I+ G+ H   +     V+ WG
Sbjct: 226 GTVWAWGNNALGQLGDGTYTERLTPVQVPG-LTG--VTAISAGESHTVAVRQDGTVWAWG 282

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               G+LG G   DR  P  V  L    V +I  G   T A+
Sbjct: 283 DNVWGQLGDGTRTDRLTPVQVPGLSG--VTAIAEGRRHTFAV 322



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 168/388 (43%), Gaps = 40/388 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG+    G LG G +          D   P  V    +  V  IA G  H   + 
Sbjct: 376 GTVWAWGDNVW-GQLGDGTY---------TDRLTPVQVPG--LTGVTAIAAGESHTVAMR 423

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           + G V++WG+ + G+LG G  +D   P  +  L ++    +A G++HT AV   G +  W
Sbjct: 424 QDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLTSVTA--IAAGDYHTLAVRQDGTVCAW 481

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV-SSVSCGPWHTAVVTSAGQLFTFGDGT 368
           G +   +G LG G       P  + G L G+ V ++++ G  HT  V   G ++ +G   
Sbjct: 482 GFNA--YGQLGDGTSSRSPSPVMVPG-LTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNA 538

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G LG G  I    P ++  L G+  + A     HT A  +             G +++W
Sbjct: 539 SGQLGDGATIDRRIPVQIPGLAGVTAIAAGSA--HTLAAGQ------------DGAVWSW 584

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G    G+LG G    RL P  V  L       ++ G + +VAL   G V   G   +GQL
Sbjct: 585 GANSYGQLGDGTTTHRLSPVQVPGLT--GVSAMAAGDAHSVALLQDGTVSAWGRNSWGQL 642

Query: 489 GDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           GD     +L P +V G LT   V  +A G  H   L     V+ WG    G+LG G T  
Sbjct: 643 GDGTTAARLTPVQVHG-LTG--VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTR 699

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           R  P  V+ L D  V +I  G   T A+
Sbjct: 700 RLAPVQVQGLTD--VTAIAAGYFHTVAV 725



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 136/312 (43%), Gaps = 31/312 (9%)

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           V     GE+HT AV   G  + WG  N  +G LG G       P ++ G L G  V++V+
Sbjct: 9   VTATTAGEYHTVAVRQDGTAWAWG--NNAWGQLGDGTRTDRLTPVQVPG-LTG--VTAVA 63

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            G  HT  V   G ++ +G   +G LG G      TP +V  L G+  +  A G  HT A
Sbjct: 64  AGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLTGVTAI--AAGRRHTFA 121

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
           V +             G ++ WGD D G+LG G +  R  P  +  L       ++ G  
Sbjct: 122 VSQ------------DGTVWAWGDNDWGQLGDGTRADRHTPVQLPELT--GVTAIAAGRR 167

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            T A+   G V+  G   +GQLGD     +L P +V G LT   V  IA GDYH   +  
Sbjct: 168 HTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPG-LTG--VTAIAAGDYHTLAVRQ 224

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWV 581
              V+ WG  A G+LG G   +R  P  V  L    V +I  G S T A+     +  W 
Sbjct: 225 DGTVWAWGNNALGQLGDGTYTERLTPVQVPGLTG--VTAISAGESHTVAVRQDGTVWAWG 282

Query: 582 SGVDQSMCSGCR 593
             V   +  G R
Sbjct: 283 DNVWGQLGDGTR 294



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 156/347 (44%), Gaps = 30/347 (8%)

Query: 207 GIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 265
           G++ SG    G  +D  +P  V+   +  V  IA G  H     + G V+SWG    G+L
Sbjct: 535 GLNASGQLGDGATIDRRIP--VQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWGANSYGQL 592

Query: 266 GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 325
           G G  +    P  +  L  ++   +A G+ H+ A+   G +  WG    ++G LG G   
Sbjct: 593 GDGTTTHRLSPVQVPGLTGVSA--MAAGDAHSVALLQDGTVSAWG--RNSWGQLGDGTTA 648

Query: 326 SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPRE 385
           +   P +++G L G  V++V+ G  HT  +   G ++ +G    G LG G       P +
Sbjct: 649 ARLTPVQVHG-LTG--VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLAPVQ 705

Query: 386 VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
           V  L  +  +  A G +HT AV +             G ++ WG    G+LG G   AR 
Sbjct: 706 VQGLTDVTAI--AAGYFHTVAVRQ------------DGTVWAWGYNLWGQLGDGSSTARS 751

Query: 446 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGK 504
            P  V  L       ++ G++ TVA+   G V+  G+    QLG+  +  +  P  VEG 
Sbjct: 752 TPVQVQELT--GVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVWVEG- 808

Query: 505 LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
           LT   V  +  G +H A ++     + WG+   G++G G T DR  P
Sbjct: 809 LTG--VSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTADRPRP 853



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 9/154 (5%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           DV  IA G  H   V + G V++WG  L G+LG G  +  S P  +  L  ++   +A G
Sbjct: 711 DVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQELTGVSA--LAAG 768

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
             HT AV   G ++ WG  N +   LG+G+    + P  + G L G  VS+++ G +HTA
Sbjct: 769 YAHTVAVKQDGTVWAWG--NNSGTQLGNGSSTDRYTPVWVEG-LTG--VSALTAGRFHTA 823

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 387
            V+  G  + +G   FG +  GD  +   PR VD
Sbjct: 824 AVSPEGFGWAWGRNNFGQV--GDGTTADRPRPVD 855


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 166/344 (48%), Gaps = 30/344 (8%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RH+ L+     V S G+   G+LG         P+ I AL+ +NV+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSL 88

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG GS    G +G   E+S + PKK+   L GI +  VSCG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAGSEGQLG-IGELKEIS-FTPKKITT-LNGIKIIQVSCGHYHSLALSK 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             Q+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
            S C  G  F WG    G+L    +   +    P  V AL       +SCG   T  LT 
Sbjct: 197 -SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQ 253

Query: 474 TGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            G V+T G    GQLG  P    + P  VE  +    V ++ CG YH +A + +  +V +
Sbjct: 254 DGKVFTFGDNRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTGQVVS 311

Query: 532 WGKGAN--GRLGHGDTDDRNF--PSLV--EALKDKQVKSIVCGT 569
           +G G +  G+  H +    NF    L+  E L   QVK I  GT
Sbjct: 312 FGHGPSDTGKPTHPEALTENFDISCLISAEDLVGVQVKHIFAGT 355



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 23/253 (9%)

Query: 329 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVD 387
           LP+ +   LE ++V  VSCG  H+  V   G++F +G G+ G LG G+   +S TP+++ 
Sbjct: 65  LPEPIQA-LETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKIT 123

Query: 388 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLV 446
           +L G++ ++ +CG +H+ A+ +              ++F+WG    G+LG G +  ++  
Sbjct: 124 TLNGIKIIQVSCGHYHSLALSK------------DSQVFSWGKNSHGQLGLGKEFPSQAS 171

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT 506
           P  V +L      QV+ G + + AL+  G  +  GS   GQL     N  +P +    L+
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN--VPVQSNKPLS 229

Query: 507 ----KNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 561
               KN  V  I+CG  H AVLT   +V+T+G   +G+LG+  T ++  P LVE + D  
Sbjct: 230 VGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVEII-DGL 288

Query: 562 VKSIVCGTSFTAA 574
           V  + CG+  T A
Sbjct: 289 VSQVDCGSYHTLA 301



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 148/310 (47%), Gaps = 41/310 (13%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKG------LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V L S     S    H      G V
Sbjct: 46  SCGD----NSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHK-----GRV 96

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG    +G LG G         +K  SF PK + +   + +  ++CG  H+  ++K  
Sbjct: 97  FAWG-AGSEGQLGIG--------ELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDS 147

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + WG 
Sbjct: 148 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG- 206

Query: 312 SNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           SN    L   G  + +   K L+ G L+ + V  +SCG  HTAV+T  G++FTFGD   G
Sbjct: 207 SNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSG 266

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LG+        P+ V+ + GL + +  CG +HT A V            ++G++ ++G 
Sbjct: 267 QLGYSPTPEKRGPQLVEIIDGLVS-QVDCGSYHTLAYVH-----------TTGQVVSFGH 314

Query: 431 G--DRGRLGH 438
           G  D G+  H
Sbjct: 315 GPSDTGKPTH 324



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   + P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  + G+L   G       N P  V ALK+  V  I CG  
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAE 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251


>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
           paniscus]
          Length = 815

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 169/340 (49%), Gaps = 29/340 (8%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +++CG  H+A+VT   +++ +G    G+LG G  S VS P  + ALK   V+L ACG +H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G++Y  GG+  N G LG G+         ++       +  +S G   +A +T
Sbjct: 99  TLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-------- 206

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
               + G+L+ +G+ + G+LG  ++       P  V+ + E    QV+CG   TV LT  
Sbjct: 207 ----TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTEN 261

Query: 475 GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVY 530
             VYT G   +GQLG       L    E K+ +N  ++    I+CG+ H A++T    +Y
Sbjct: 262 A-VYTFGLGQFGQLG---LGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMY 317

Query: 531 TWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           T+G G +G+LG G  +  N   P+L        VK + CG
Sbjct: 318 TFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 150/309 (48%), Gaps = 27/309 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + +   +I    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G ++ WG +  + G +G  N  ++ +P+++     G  V
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDN--SEGQIGLKNVSNVCVPQQVTI---GKPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+ FG+   G LG  +++  +  TP+ V  +   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  +  + +    
Sbjct: 252 GEHTVVLTENAV-------------YTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            +SCG + T  +T  G +YT G   +G+LG   +   N  +PT     L +  V+ +ACG
Sbjct: 299 YISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL-RFIVKLVACG 357

Query: 517 DYHVAVLTS 525
             H+ +  +
Sbjct: 358 GCHMVIFAA 366



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 46/269 (17%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTG----------HLKGLSGDTFRV 168
           P KV L   +ACG  ++L S          G ++G+ G          H+        ++
Sbjct: 86  PEKVKL---AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI 142

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
              SA S++S     D     G +F+WG+             S    G+K  S V    +
Sbjct: 143 KQLSAGSNTSAALTED-----GRLFMWGD------------NSEGQIGLKNVSNVCVPQQ 185

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNIN 286
             +   V  I+CG  H+A VT  GE++ +GE   G+LG  + +  +   P+L+  +    
Sbjct: 186 VTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           ++ VACG  HT  +T +  +YT+G     FG LG G  +      K+   +    +S +S
Sbjct: 246 IQ-VACGGEHTVVLTENA-VYTFGLG--QFGQLGLGTFLFETSEPKVIENIRDQTISYIS 301

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           CG  HTA++T  G ++TFGDG  G LG G
Sbjct: 302 CGENHTALITDIGLMYTFGDGRHGKLGLG 330



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G     + P+ V+ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 166/344 (48%), Gaps = 30/344 (8%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RH+ L+     V S G+   G+LG         P+ I AL+ +NV+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSL 88

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG GS    G +G   E+S + PKK+   L GI +  VSCG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAGSEGQLG-IGELKEIS-FTPKKITT-LNGIKIIQVSCGHYHSLALSK 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             Q+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
            S C  G  F WG    G+L    +   +    P  V AL       +SCG   T  LT 
Sbjct: 197 -SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQ 253

Query: 474 TGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 531
            G V+T G    GQLG  P    + P  VE  +    V ++ CG YH +A + +  +V +
Sbjct: 254 DGKVFTFGDNRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTGQVVS 311

Query: 532 WGKGAN--GRLGHGDTDDRNF--PSLV--EALKDKQVKSIVCGT 569
           +G G +  G+  H +    NF    L+  E L   QVK I  GT
Sbjct: 312 FGHGPSDTGKPTHPEALTENFDISCLISAEDLVGVQVKHIFAGT 355



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 23/253 (9%)

Query: 329 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVD 387
           LP+ +   LE ++V  VSCG  H+  V   G++F +G G+ G LG G+   +S TP+++ 
Sbjct: 65  LPEPIQA-LETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKIT 123

Query: 388 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLV 446
           +L G++ ++ +CG +H+ A+ +              ++F+WG    G+LG G +  ++  
Sbjct: 124 TLNGIKIIQVSCGHYHSLALSK------------DSQVFSWGKNSHGQLGLGKEFPSQAS 171

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT 506
           P  V +L      QV+ G + + AL+  G  +  GS   GQL     N  +P +    L+
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN--VPVQSNKPLS 229

Query: 507 ----KNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 561
               KN  V  I+CG  H AVLT   +V+T+G   +G+LG+  T ++  P LVE + D  
Sbjct: 230 VGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVEII-DGL 288

Query: 562 VKSIVCGTSFTAA 574
           V  + CG+  T A
Sbjct: 289 VSQVDCGSYHTLA 301



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 148/310 (47%), Gaps = 41/310 (13%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKG------LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V L S     S    H      G V
Sbjct: 46  SCGD----NSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHK-----GRV 96

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG    +G LG G         +K  SF PK + +   + +  ++CG  H+  ++K  
Sbjct: 97  FAWG-AGSEGQLGIG--------ELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDS 147

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + WG 
Sbjct: 148 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG- 206

Query: 312 SNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           SN    L   G  + +   K L+ G L+ + V  +SCG  HTAV+T  G++FTFGD   G
Sbjct: 207 SNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSG 266

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LG+        P+ V+ + GL + +  CG +HT A V            ++G++ ++G 
Sbjct: 267 QLGYSPTPEKRGPQLVEIIDGLVS-QVDCGSYHTLAYVH-----------TTGQVVSFGH 314

Query: 431 G--DRGRLGH 438
           G  D G+  H
Sbjct: 315 GPSDTGKPTH 324



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   + P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  + G+L   G       N P  V ALK+  V  I CG  
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAE 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251


>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
          Length = 1020

 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 168/339 (49%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H+A+VT   +++ +G    G+LG G  S +S P  + ALK   V+L ACG +HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G++Y  GG+  N G LG G+         ++       +  +S G   +A +T 
Sbjct: 100 LVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V          
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
              + G+L+ +G+ + G+LG  ++       P  V+ + E    QV+CG   TV LT   
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA 262

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VYT G   +GQLG       L    E K+ +N  ++    I+CG+ H A++T    +YT
Sbjct: 263 -VYTFGLGQFGQLG---LGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYT 318

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N   P+L        VK + CG
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 35/313 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + +   +I    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G ++ WG +  + G +G  N  ++ +P+++     G  V
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDN--SEGQIGLKNVSNVCVPQQVTI---GKPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+ FG+   G LG  +++  +  TP+ V  +   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  +  + +    
Sbjct: 252 GEHTVVLTENAV-------------YTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF----VEE 512
            +SCG + T  +T  G +YT G   +G+LG   +   N  +PT     L  NF    V+ 
Sbjct: 299 YISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPT-----LCSNFLRFIVKL 353

Query: 513 IACGDYHVAVLTS 525
           +ACG  H+ V  +
Sbjct: 354 VACGGCHMVVFAA 366



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 46/269 (17%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTG----------HLKGLSGDTFRV 168
           P KV L   +ACG  ++L S          G ++G+ G          H+        ++
Sbjct: 86  PEKVKL---AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI 142

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
              SA S++S     D     G +F+WG+             S    G+K  S V    +
Sbjct: 143 KQLSAGSNTSAALTED-----GRLFMWGD------------NSEGQIGLKNVSNVCVPQQ 185

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNIN 286
             +   V  I+CG  H+A VT  GE++ +GE   G+LG  + +  +   P+L+  +    
Sbjct: 186 VTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           ++ VACG  HT  +T +  +YT+G     FG LG G  +      K+   +    +S +S
Sbjct: 246 IQ-VACGGEHTVVLTENA-VYTFGLG--QFGQLGLGTFLFETSEPKVIENIRDQTISYIS 301

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           CG  HTA++T  G ++TFGDG  G LG G
Sbjct: 302 CGENHTALITDIGLMYTFGDGRHGKLGLG 330



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G     + P+ V+ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 164/329 (49%), Gaps = 29/329 (8%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNI-----NVELVACGEHHTCAVTLSGDMYT 308
           ++ WG  + G LG G    + H ++   +++      NV  V  GE+HT  +T SG++++
Sbjct: 1   MYCWGSTVHGELGLG---GIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFS 57

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G  N +   LGH  + +   P+K+ G L+   ++ +SCG  HT      GQLF +G  +
Sbjct: 58  CG--NNDLDQLGHKKQRTK--PEKVEG-LDFYRITKISCGGNHTLAFNEWGQLFGWGSDS 112

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G LG  +  +   P+ + SL     V+ +CG  H+ A+             ++G+L++W
Sbjct: 113 HGQLGF-NGTTQPLPKIIKSLATFHIVQISCGKNHSLALT------------NNGELYSW 159

Query: 429 GDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           G    G+LG G + E    PT + +L+      ++CG + + AL+ +G +Y  G   YGQ
Sbjct: 160 GGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQ 219

Query: 488 LGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG      KL PT+++  L    V+ IACG+   A L++   V+T G G  G+LGHG T 
Sbjct: 220 LGLNDEENKLHPTQLK-TLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTS 278

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +   P  +  L    V  + CG   T A+
Sbjct: 279 NEILPRKIMELMGSTVTQVSCGKRHTLAL 307



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 157/331 (47%), Gaps = 21/331 (6%)

Query: 205 GGGIHRSGSYAGVKMDS-FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGG 263
           G  +H      G++ D  F P         +V  +  G  H  ++TK GEVFS G     
Sbjct: 5   GSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGNNDLD 64

Query: 264 RLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN 323
           +LGH      + P+ ++ L    +  ++CG +HT A    G ++ WG    + G LG  N
Sbjct: 65  QLGH--KKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSD--SHGQLGF-N 119

Query: 324 EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-T 382
             +  LPK +   L   H+  +SCG  H+  +T+ G+L+++G    G LG G R      
Sbjct: 120 GTTQPLPKIIKS-LATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQ 178

Query: 383 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE 442
           P  + SL G+     ACG  H+ A+              SG ++ WG    G+LG  D+E
Sbjct: 179 PTLIKSLLGIPIAFIACGSNHSFAL------------SKSGAIYGWGKNTYGQLGLNDEE 226

Query: 443 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVE 502
            +L PT +  L       ++CG   +  L+  G V+T G+ +YGQLG    + ++  R  
Sbjct: 227 NKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKI 286

Query: 503 GKLTKNFVEEIACGDYH-VAVLTSRTEVYTW 532
            +L  + V +++CG  H +A++ SR  VY++
Sbjct: 287 MELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 13/198 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+++ WG    DG LG G+               P  ++S + + +  IACG  H+  ++
Sbjct: 154 GELYSWGG-NYDGQLGLGMRSEYEKQ--------PTLIKSLLGIPIAFIACGSNHSFALS 204

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           K G ++ WG+   G+LG   + +  HP  +  L++I V+ +ACGE  +  ++  G ++T 
Sbjct: 205 KSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTC 264

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G     +G LGHG+  +  LP+K+   L G  V+ VSCG  HT A+V S G++++FG G 
Sbjct: 265 GAG--MYGQLGHGSTSNEILPRKIM-ELMGSTVTQVSCGKRHTLALVPSRGRVYSFGLGG 321

Query: 369 FGVLGHGDRISVSTPREV 386
            G LG   + + STP+ V
Sbjct: 322 GGQLGTRVKTNCSTPQVV 339


>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
           musculus]
          Length = 1039

 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 164/339 (48%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  + +  P  I ALK   V+L ACG +HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T +G +Y  GG+N     LG  ++   +       P + I    +S G   +A +T 
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 195

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  D+ +V  P EV   K +  +  +CG +H+A V          
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 244

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                G+L+T+G+ + G+LG  ++       P  V  + E    QV+CG   TV LT   
Sbjct: 245 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK- 299

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VY  G   +GQLG       L    E K+ +   ++    I+CG+ H A++T    +YT
Sbjct: 300 VVYAFGLGQFGQLG---LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYT 356

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 155/334 (46%), Gaps = 33/334 (9%)

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           +LV   G VF++G+    +    + S           KN     ++CG+ HT  VT +  
Sbjct: 44  SLVPDTGAVFTFGK---TKFAENIPSKF-------WFKNDIPICLSCGDEHTAIVTGNNK 93

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG  HT V T  G ++  G
Sbjct: 94  LYMFGSNN--WGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGRNHTLVSTDTGGVYAAG 150

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
               G LG GD     T  ++       T++      +T+A +              GKL
Sbjct: 151 GNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAAL-----------TEDGKL 199

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           F WGD   G++G  DK    +P  V   V      +SCG+  +  +T  G +YT G P  
Sbjct: 200 FMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSAFVTMDGELYTFGEPEN 257

Query: 486 GQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
           G+LG P     N + P RV G   +  V ++ACG  H  VLT +  VY +G G  G+LG 
Sbjct: 258 GKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTEKV-VYAFGLGQFGQLGL 314

Query: 543 GD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G    + + P ++E +KD+++  I CG + TA +
Sbjct: 315 GTFLFETSEPKIIERIKDQKICHISCGENHTALM 348



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 152/322 (47%), Gaps = 37/322 (11%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDV 273
           G K     P  +++     V+  ACG  H  + T  G V++ G    G+LG G   D D 
Sbjct: 108 GSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT 167

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            H +++       ++ ++ G + + A+T  G ++ WG ++   G +G  ++ ++ +P ++
Sbjct: 168 FH-QIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEV 224

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKG 391
                G  +S +SCG +H+A VT  G+L+TFG+   G LG  + + ++  +P+ V  +  
Sbjct: 225 TV---GKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE 281

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCV 450
            R ++ ACG  HT  + E +V             + +G G  G+LG G        P  +
Sbjct: 282 -RVIQVACGGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKII 327

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTK 507
             + +   C +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L  
Sbjct: 328 ERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPT-----LCS 382

Query: 508 NF----VEEIACGDYHVAVLTS 525
           NF    V+ IACG  H+ V  +
Sbjct: 383 NFLRFAVQLIACGGCHMLVFAT 404



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 36/264 (13%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTGHLKGLSGDTFR--VSLSSAVSS 176
           P KV L   +ACG  ++L S          G ++G+ G       DTF   V  + A + 
Sbjct: 124 PEKVKL---AACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI 180

Query: 177 SSQGSGHDDGDSL---GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
               +G +   +L   G +F+WG+             S    G++  S V    E  V  
Sbjct: 181 KQLSAGANTSAALTEDGKLFMWGD------------NSEGQIGLEDKSNVCIPHEVTVGK 228

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVA 291
            +  I+CG  H+A VT  GE++++GE   G+LG   +  ++H  P+ +  +    ++ VA
Sbjct: 229 PISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VA 287

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           CG  HT  +T    +Y +G     FG LG G  +      K+   ++   +  +SCG  H
Sbjct: 288 CGGGHTVVLT-EKVVYAFGLG--QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENH 344

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG 375
           TA++T  G L+TFGDG  G LG G
Sbjct: 345 TALMTELGLLYTFGDGRHGKLGLG 368


>gi|403333599|gb|EJY65911.1| hypothetical protein OXYTRI_13931 [Oxytricha trifallax]
          Length = 1207

 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 186/428 (43%), Gaps = 56/428 (13%)

Query: 167 RVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKA 226
           R++   A+++SS  S    GD   +VF WG     G LG G   S      K    VP+ 
Sbjct: 41  RIANHDALNTSSNKSQVQGGD-YTEVFSWG-SDKFGQLGLGKQISSQ----KQFHMVPRF 94

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD----SDVSHPKLIDAL 282
              +  + +  ++CG  H+  +T    ++S G  L G+LG  +D       S P L++ L
Sbjct: 95  C--SYNIPITQVSCGTSHSVFITSSQLIYSMGSNLQGQLG--IDDPYTQQKSSPVLVELL 150

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG----NEMSLWLPKKLN-GPL 337
            N     ++CG +HT A+   G++Y+WG SN N G  G G    + +  W PK +     
Sbjct: 151 VNHKPIQISCGNNHTLALMRDGEVYSWG-SNEN-GQCGSGASPFHTVVQWAPKIVKFDDY 208

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           +   +  +  G +H+  V   G+LF  G G  G LG+       +P  +  +   +    
Sbjct: 209 QRPFIKQIDSGAFHSGFVDEIGRLFMCGKGDQGQLGNMSYQDELSPFYISKIPE-KIQEV 267

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR--LVPTCVAALVE 455
           ACG  HT  +              +G+++T G   RG+LG G   +R   VP  +  L  
Sbjct: 268 ACGDDHTVVLTR------------NGEIYTMGSNSRGQLGTGPSSSRGSNVPVLLQELNF 315

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 515
               ++  G   + +L+    +Y  G   +G+   P        RV+       V+ +  
Sbjct: 316 IRMTRIRAGQ-FSASLSVDNQLYLWGCGTFGEFFTPH-------RVKS------VQNLEL 361

Query: 516 GDYHV------AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
            D+ +       VLT +  VYTWG    G+LG  D+  R+ P  VEAL  K+V  I CG 
Sbjct: 362 ADFQLGKSGFLTVLTRQGSVYTWGINDMGQLGLRDSIQRSTPHRVEALDGKRVTQITCGR 421

Query: 570 SFTAAICL 577
            +  A+ L
Sbjct: 422 DYVIALGL 429


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 164/335 (48%), Gaps = 28/335 (8%)

Query: 254 VFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           V+S G   GGRLG   + +  +    +  L+++ V+ +ACG  H   ++ +G +Y+WG +
Sbjct: 6   VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYN 65

Query: 313 NCNFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           +      GHG E +S W P+ +   LE + V  ++ G  H+  +T   ++FT+G G  G 
Sbjct: 66  DSR--QTGHGVEDLSDWEPRWIR-ALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQ 122

Query: 372 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           LGHGD   V  P  V  L+G       CG  +T A+              +GK+  +G  
Sbjct: 123 LGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAIT------------GTGKVLGFGSA 170

Query: 432 DRGRLGHGDKEARL-----VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
             G+LG+GD +  +     +P  + +L +    Q + G + ++ L+ TG +Y++G    G
Sbjct: 171 ASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANG 230

Query: 487 QLGDPKANGK---LP---TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
           QLG P    +   LP   T  E      FV+ ++CGD H   L+    VY+WG G N  L
Sbjct: 231 QLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWAL 290

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           GHG T+D   P +V  L+     S+  G   +AA+
Sbjct: 291 GHGGTEDTFTPKMVAMLEADPCVSVSAGGYHSAAV 325



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 170/343 (49%), Gaps = 29/343 (8%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS--HPKLIDALKNINVELV 290
           ++V+++ACGG+H  L+++ G+V+SWG     + GHGV+ D+S   P+ I AL+ + V  +
Sbjct: 38  VEVKSLACGGKHNLLLSRAGKVYSWGYNDSRQTGHGVE-DLSDWEPRWIRALETVKVVQI 96

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
           A GE H+ A+T   +++TWG      G LGHG+   +W P  + G L+G  + S+ CG  
Sbjct: 97  AAGEDHSVALTDRSEVFTWG--RGLHGQLGHGDVSDVWFPFLVKG-LQGKGIKSIGCGYE 153

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRI-----SVSTPREVDSLKGLRTVRAACGVWHTA 405
           +T  +T  G++  FG    G LG+GD       +V  P ++ SL     ++A  G     
Sbjct: 154 NTFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGK---- 209

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN-----FCQ 460
                   + S     +G+L++ G    G+LG   +E   +       ++       F +
Sbjct: 210 --------NFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVK 261

Query: 461 -VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
            VSCG S ++AL+  G VY+ GS +   LG          ++   L  +    ++ G YH
Sbjct: 262 YVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEADPCVSVSAGGYH 321

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQV 562
            A +++   +YTWG+   G+LG G   D +    V+ L  + +
Sbjct: 322 SAAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRVI 364



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 154/333 (46%), Gaps = 39/333 (11%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           +  + P+ + +   + V  IA G  H+  +T + EVF+WG  L G+LGHG  SDV  P L
Sbjct: 77  LSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGDVSDVWFPFL 136

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-----EMSLWLPKKL 333
           +  L+   ++ + CG  +T A+T +G +  +G +    G LG+G+       +++LP +L
Sbjct: 137 VKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAAS--GKLGNGDVDGGIGGNVYLPVQL 194

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTP-----REV 386
              L    +   + G   +  ++  GQL++ G    G LG    +  S++ P     +EV
Sbjct: 195 K-SLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEV 253

Query: 387 DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV 446
            S KG+     +CG  H+ A+ E             G +++WG G    LGHG  E    
Sbjct: 254 -SHKGVFVKYVSCGDSHSLALSE------------DGIVYSWGSGINWALGHGGTEDTFT 300

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG------DPKAN--GKLP 498
           P  VA L       VS G   + A++ TG +YT G    GQLG      D  A+   +LP
Sbjct: 301 PKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLP 360

Query: 499 TRVEGKLTKNFVE---EIACGDYHVAVLTSRTE 528
           TRV  K + +  E    + CG  H  +     E
Sbjct: 361 TRVILKGSVDSSEMAMRVGCGQCHTILQVCVVE 393


>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
          Length = 1001

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 164/339 (48%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  + +  P  I ALK   V+L ACG +HT
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T +G +Y  GG+N     LG  ++   +       P + I    +S G   +A +T 
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  D+ +V  P EV   K +  +  +CG +H+A V          
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                G+L+T+G+ + G+LG  ++       P  V  + E    QV+CG   TV LT   
Sbjct: 207 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEKV 262

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VY  G   +GQLG       L    E K+ +   ++    I+CG+ H A++T    +YT
Sbjct: 263 -VYAFGLGQFGQLG---LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYT 318

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 140/290 (48%), Gaps = 23/290 (7%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           ++CG+ HT  VT +  +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG 
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNN--WGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGR 96

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            HT V T  G ++  G    G LG GD     T  ++       T++      +T+A + 
Sbjct: 97  NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAAL- 155

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
                        GKLF WGD   G++G  DK    +P  V   V      +SCG+  + 
Sbjct: 156 ----------TEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSA 203

Query: 470 ALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            +T  G +YT G P  G+LG P     N + P RV G   +  V ++ACG  H  VLT +
Sbjct: 204 FVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTEK 261

Query: 527 TEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             VY +G G  G+LG G    + + P ++E +KD+++  I CG + TA +
Sbjct: 262 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALM 310



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 152/322 (47%), Gaps = 37/322 (11%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDV 273
           G K     P  +++     V+  ACG  H  + T  G V++ G    G+LG G   D D 
Sbjct: 70  GSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT 129

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            H +++       ++ ++ G + + A+T  G ++ WG ++   G +G  ++ ++ +P ++
Sbjct: 130 FH-QIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEV 186

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKG 391
                G  +S +SCG +H+A VT  G+L+TFG+   G LG  + + ++  +P+ V  +  
Sbjct: 187 TV---GKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE 243

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCV 450
            R ++ ACG  HT  + E +V             + +G G  G+LG G        P  +
Sbjct: 244 -RVIQVACGGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKII 289

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTK 507
             + +   C +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L  
Sbjct: 290 ERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPT-----LCS 344

Query: 508 NF----VEEIACGDYHVAVLTS 525
           NF    V+ IACG  H+ V  +
Sbjct: 345 NFLRFAVQLIACGGCHMLVFAT 366



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 36/264 (13%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTGHLKGLSGDTFR--VSLSSAVSS 176
           P KV L   +ACG  ++L S          G ++G+ G       DTF   V  + A + 
Sbjct: 86  PEKVKL---AACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI 142

Query: 177 SSQGSGHDDGDSL---GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
               +G +   +L   G +F+WG+             S    G++  S V    E  V  
Sbjct: 143 KQLSAGANTSAALTEDGKLFMWGD------------NSEGQIGLEDKSNVCIPHEVTVGK 190

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVA 291
            +  I+CG  H+A VT  GE++++GE   G+LG   +  ++H  P+ +  +    ++ VA
Sbjct: 191 PISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VA 249

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           CG  HT  +T    +Y +G     FG LG G  +      K+   ++   +  +SCG  H
Sbjct: 250 CGGGHTVVLT-EKVVYAFGLG--QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENH 306

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG 375
           TA++T  G L+TFGDG  G LG G
Sbjct: 307 TALMTELGLLYTFGDGRHGKLGLG 330


>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Short=mRpgr; Flags: Precursor
          Length = 1001

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 164/339 (48%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  + +  P  I ALK   V+L ACG +HT
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T +G +Y  GG+N     LG  ++   +       P + I    +S G   +A +T 
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  D+ +V  P EV   K +  +  +CG +H+A V          
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                G+L+T+G+ + G+LG  ++       P  V  + E    QV+CG   TV LT   
Sbjct: 207 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEKV 262

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VY  G   +GQLG       L    E K+ +   ++    I+CG+ H A++T    +YT
Sbjct: 263 -VYAFGLGQFGQLG---LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYT 318

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 140/290 (48%), Gaps = 23/290 (7%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           ++CG+ HT  VT +  +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG 
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNN--WGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGR 96

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            HT V T  G ++  G    G LG GD     T  ++       T++      +T+A + 
Sbjct: 97  NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAAL- 155

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
                        GKLF WGD   G++G  DK    +P  V   V      +SCG+  + 
Sbjct: 156 ----------TEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSA 203

Query: 470 ALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            +T  G +YT G P  G+LG P     N + P RV G   +  V ++ACG  H  VLT +
Sbjct: 204 FVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTEK 261

Query: 527 TEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             VY +G G  G+LG G    + + P ++E +KD+++  I CG + TA +
Sbjct: 262 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALM 310



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 152/322 (47%), Gaps = 37/322 (11%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDV 273
           G K     P  +++     V+  ACG  H  + T  G V++ G    G+LG G   D D 
Sbjct: 70  GSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT 129

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            H +++       ++ ++ G + + A+T  G ++ WG ++   G +G  ++ ++ +P ++
Sbjct: 130 FH-QIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEV 186

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKG 391
                G  +S +SCG +H+A VT  G+L+TFG+   G LG  + + ++  +P+ V  +  
Sbjct: 187 TV---GKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE 243

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCV 450
            R ++ ACG  HT  + E +V             + +G G  G+LG G        P  +
Sbjct: 244 -RVIQVACGGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKII 289

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTK 507
             + +   C +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L  
Sbjct: 290 ERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPT-----LCS 344

Query: 508 NF----VEEIACGDYHVAVLTS 525
           NF    V+ IACG  H+ V  +
Sbjct: 345 NFLRFAVQLIACGGCHMLVFAT 366



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 36/264 (13%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTGHLKGLSGDTFR--VSLSSAVSS 176
           P KV L   +ACG  ++L S          G ++G+ G       DTF   V  + A + 
Sbjct: 86  PEKVKL---AACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI 142

Query: 177 SSQGSGHDDGDSL---GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
               +G +   +L   G +F+WG+             S    G++  S V    E  V  
Sbjct: 143 KQLSAGANTSAALTEDGKLFMWGD------------NSEGQIGLEDKSNVCIPHEVTVGK 190

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVA 291
            +  I+CG  H+A VT  GE++++GE   G+LG   +  ++H  P+ +  +    ++ VA
Sbjct: 191 PISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VA 249

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           CG  HT  +T    +Y +G     FG LG G  +      K+   ++   +  +SCG  H
Sbjct: 250 CGGGHTVVLT-EKVVYAFGLG--QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENH 306

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG 375
           TA++T  G L+TFGDG  G LG G
Sbjct: 307 TALMTELGLLYTFGDGRHGKLGLG 330


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 170/352 (48%), Gaps = 36/352 (10%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           ++   A G RH+ L+     V S G+   G+LG         P+ I AL+ + V+LV+CG
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCG 83

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           + H+ AV   G ++ WG GS    G +G   E+S + PKK+   L GI +  VSCG +H+
Sbjct: 84  KEHSLAVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHS 140

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             ++   Q+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+    
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---- 196

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLT 468
                 S C  G  F WG    G+L    +   +    P  V AL       +SCG + T
Sbjct: 197 ------SLC--GTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248

Query: 469 VALTTTGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVL 523
             LT  G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A +
Sbjct: 249 AVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYV 303

Query: 524 TSRTEVYTWGKGAN--GRLGHGDTDDRNF--PSLV--EALKDKQVKSIVCGT 569
            +  +V ++G G +   +  H +    NF    L+  E L D  VK I  GT
Sbjct: 304 HTTGQVVSFGHGPSDTSKPTHSEALTENFDISCLISAEDLVDVHVKHIFAGT 355



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 135/278 (48%), Gaps = 28/278 (10%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKG------LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V L S     S    H      G V
Sbjct: 46  SCGD----NSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHK-----GRV 96

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG    +G LG G          K  SF PK + +   + +  ++CG  H+  ++K  
Sbjct: 97  FAWG-AGSEGQLGIG--------EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDS 147

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + W G
Sbjct: 148 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW-G 206

Query: 312 SNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           SN +  L   G  + +   K L+ G L+ + V  +SCG  HTAV+T  G++FTFGD   G
Sbjct: 207 SNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSG 266

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            LG+        P+ V+ + GL + +  CG +HT A V
Sbjct: 267 QLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYV 303



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   + P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  ++G+L   G       N P  V ALK+  V  I CG +
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 6/112 (5%)

Query: 204 LGGGIHRSGSYA----GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
            G G + SG  A     V + S  P +V +   L V  I+CG  H A++T+ G+VF++G+
Sbjct: 203 FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGD 262

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 310
              G+LG+    +   P+L++ +  + V  + CG +HT A V  +G + ++G
Sbjct: 263 NRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 141/282 (50%), Gaps = 21/282 (7%)

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           HT A+T +G +Y+WG     FG LGHGN  +  LPK + G  +   ++ +S G  H+A +
Sbjct: 433 HTLALTKNGVVYSWGDGE--FGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAI 490

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           T  G L+T+G+G  G LGHGD      P  V S+     V A C   HT  + +      
Sbjct: 491 TKDGDLYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQVAAGCS--HTVVLSK------ 542

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                    ++T+G GD G+LGHG+ +    P  V AL      +++ G   ++ALT TG
Sbjct: 543 -----DEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTG 597

Query: 476 HVYTMGS-PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            +Y  G  P  G +G   A   LP  VE  L    + +I+ GD H   L++  EVY+WG 
Sbjct: 598 FIYVWGCGPCLG-VGAADAVHLLPKIVES-LRDVHIVDISLGDCHCLALSADHEVYSWGN 655

Query: 535 GANGR--LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              G+  LGH  T   + P+ V AL   +++ I  GTS + A
Sbjct: 656 NNMGQCGLGHCFT-PVSLPTKVLALDGIKIEQISTGTSHSFA 696



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 140/280 (50%), Gaps = 25/280 (8%)

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           +L  + Y WG SN +  L+  GN+  +  PKK +     I + +   G + T  +   G 
Sbjct: 334 SLKHEAYAWG-SNSSHQLV-EGNKDKILTPKKNDAFKNAIQLEA---GQYCTFALFDDGS 388

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDSL-KGLRTVRAACGV-WHTAAVVEVMVGSSSSS 418
           L   G G+ G LG GD  S     +++   + +  + ++ G   HT A+ +         
Sbjct: 389 LHACGKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTK--------- 439

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTTTGHV 477
              +G +++WGDG+ G+LGHG+   + +P  +  + +      +S G   + A+T  G +
Sbjct: 440 ---NGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDL 496

Query: 478 YTMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLT-SRTEVYTWGKG 535
           YT G   +G+LG   ++  ++PT V    + +   ++A G  H  VL+     V+T+G G
Sbjct: 497 YTWGEGEHGRLGHGDSSIQRVPTLVR---SIDAASQVAAGCSHTVVLSKDEMTVWTFGAG 553

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            NG+LGHG+T    +P +V+ALK  ++K I  GT  + A+
Sbjct: 554 DNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIAL 593



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 78/199 (39%), Gaps = 53/199 (26%)

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT----------------CVAALVE 455
           +GS + S+    + + WG     +L  G+K+  L P                 C  AL +
Sbjct: 326 LGSPNDSSSLKHEAYAWGSNSSHQLVEGNKDKILTPKKNDAFKNAIQLEAGQYCTFALFD 385

Query: 456 PNFCQV-----------------SCGHSL-------------------TVALTTTGHVYT 479
                                   C H L                   T+ALT  G VY+
Sbjct: 386 DGSLHACGKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYS 445

Query: 480 MGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
            G   +G+LG    A  KLP  + G      +  I+ G  H A +T   ++YTWG+G +G
Sbjct: 446 WGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHG 505

Query: 539 RLGHGDTDDRNFPSLVEAL 557
           RLGHGD+  +  P+LV ++
Sbjct: 506 RLGHGDSSIQRVPTLVRSI 524


>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Loxodonta africana]
          Length = 1100

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 162/336 (48%), Gaps = 23/336 (6%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H AL+T   +++ +G    G+LG G  S V  P  + ALK+  V+L ACG +HT
Sbjct: 36  LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHT 95

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G++Y  GG+N   G LG G+         ++       +  +S G   +A +T 
Sbjct: 96  LVSTEGGNVYATGGNNE--GQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANISAALTE 153

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G     +V  PR+V   K +  +  +CG +H+A V          
Sbjct: 154 DGELFMWGDNSEGQIGLNSISNVYVPRQVTVGKPISWI--SCGYYHSAFVT--------- 202

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                GKL+T+G+ + G+LG   ++      P  V+ + E    QV+CG   TV LT   
Sbjct: 203 ---MEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGISE-KVIQVACGGGHTVVLTEKA 258

Query: 476 HVYTMGSPVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            VYT G   +GQLG      + P   +   +    +  I+CG+ H A++T    +YT+G 
Sbjct: 259 -VYTFGQGRFGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGD 317

Query: 535 GANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           G +G+LG G  +  N   P+L        +  + CG
Sbjct: 318 GRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACG 353



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 152/328 (46%), Gaps = 33/328 (10%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G VF++G+    RL   + S           KN     ++CG+ HT  +T +  +Y +G 
Sbjct: 8   GAVFTFGKT---RLAENIPSKF-------WFKNDVPIYLSCGDEHTALITGNNKLYMFGS 57

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           +N  +G LG G++ +++ P  +   L+   V   +CG  HT V T  G ++  G    G 
Sbjct: 58  NN--WGQLGLGSKSAVYRPICVKA-LKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQ 114

Query: 372 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           LG GD    +  R    L    T R         A +       S++    G+LF WGD 
Sbjct: 115 LGLGD----TEERNSFHLISFFTSRHKIKQLSAGANI-------SAALTEDGELFMWGDN 163

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
             G++G        VP  V   V      +SCG+  +  +T  G +YT G P  G+LG P
Sbjct: 164 SEGQIGLNSISNVYVPRQVT--VGKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLP 221

Query: 492 KA---NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TDD 547
                N + P  V G   K  V ++ACG  H  VLT +  VYT+G+G  G+LG G     
Sbjct: 222 SEQLINHRKPQLVSGISEK--VIQVACGGGHTVVLTEKA-VYTFGQGRFGQLGLGSFIFQ 278

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              P+++E +KD++++ I CG + TA I
Sbjct: 279 APEPAILEHVKDQKIRHISCGENHTALI 306



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 26/244 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ ++ G   +A +T+ GE+F WG+   G++G    S+V  P+ +   K I+   ++CG 
Sbjct: 138 IKQLSAGANISAALTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTVGKPIS--WISCGY 195

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL--WLPKKLNGPLEGIHVSSVSCGPWHT 352
           +H+  VT+ G +YT+G   C  G LG  +E  +    P+ ++G  E   V  V+CG  HT
Sbjct: 196 YHSAFVTMEGKLYTFGEPEC--GKLGLPSEQLINHRKPQLVSGISE--KVIQVACGGGHT 251

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            V+T    ++TFG G FG LG G  I     P  ++ +K  +    +CG  HTA + +V 
Sbjct: 252 VVLTEKA-VYTFGQGRFGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITDV- 309

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCG--HSL 467
                      G ++T+GDG  G+LG G  +   + VPT  +   +     V+CG  H L
Sbjct: 310 -----------GHMYTFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGCHML 358

Query: 468 TVAL 471
             A+
Sbjct: 359 IFAI 362



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 152/315 (48%), Gaps = 27/315 (8%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G K   + P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + + 
Sbjct: 66  GSKSAVYRPICVKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNS 125

Query: 276 PKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
             LI    + + ++ ++ G + + A+T  G+++ WG  + + G +G  +  ++++P+++ 
Sbjct: 126 FHLISFFTSRHKIKQLSAGANISAALTEDGELFMWG--DNSEGQIGLNSISNVYVPRQVT 183

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGL 392
               G  +S +SCG +H+A VT  G+L+TFG+   G LG      I+   P+ V  +   
Sbjct: 184 ---VGKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGISE- 239

Query: 393 RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVA 451
           + ++ ACG  HT  + E  V             +T+G G  G+LG G    +   P  + 
Sbjct: 240 KVIQVACGGGHTVVLTEKAV-------------YTFGQGRFGQLGLGSFIFQAPEPAILE 286

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKN 508
            + +     +SCG + T  +T  GH+YT G   +G+LG   +   N  +PT      +K 
Sbjct: 287 HVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLGLGLENFTNQFVPTLC-SHFSKF 345

Query: 509 FVEEIACGDYHVAVL 523
            +  +ACG  H+ + 
Sbjct: 346 IIHLVACGGCHMLIF 360



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 7/98 (7%)

Query: 212 GSYAGVKMDSFVPKAVESAVVLDVQN-----IACGGRHAALVTKQGEVFSWGEELGGRLG 266
           G +  + + SF+ +A E A++  V++     I+CG  H AL+T  G ++++G+   G+LG
Sbjct: 265 GRFGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLG 324

Query: 267 HGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTL 302
            G+++  +   P L        + LVACG  H     +
Sbjct: 325 LGLENFTNQFVPTLCSHFSKFIIHLVACGGCHMLIFAI 362


>gi|297733996|emb|CBI15243.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/188 (45%), Positives = 111/188 (59%), Gaps = 5/188 (2%)

Query: 7   FQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDE 66
           F++YPR EKE QSFSL+Y D SLD+ICKDKDEAEVWF  L+ALIS+ +Y     E+RSD 
Sbjct: 82  FRQYPRLEKEDQSFSLMYKDGSLDIICKDKDEAEVWFVALRALISQCNYHNWINETRSD- 140

Query: 67  VSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSYESPPKNVLDKALSDAVLY 126
             S +       +R++PL+    S     KD  +   +   ++ P K  L +A SD + Y
Sbjct: 141 --SGSLDHHTDIRRNTPLTVSANSSDIISKDPENVQTILIPFQHPRKKRLGRAFSDIISY 198

Query: 127 AAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDG 186
               K     ES   S++SLS GG D   G    +  DTF +SLSSAVSS  QGS  +D 
Sbjct: 199 TGATKGFTRVESVPSSLSSLSVGGIDDPNGCSSAV--DTFHISLSSAVSSPGQGSSREDF 256

Query: 187 DSLGDVFI 194
           D+LGDVFI
Sbjct: 257 DALGDVFI 264


>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
           aries]
          Length = 1137

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 162/338 (47%), Gaps = 27/338 (7%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+ T   ++F +G    G+LG G  + V+ P  I ALK   V+ VACG +HT
Sbjct: 66  LSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHT 125

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVVT 356
             +T  G +Y  GG+N     LG  +E S +    L       H +  +S G   +A +T
Sbjct: 126 LVLTGGGKVYATGGNNEGQLGLGDTDERSAF---HLISFFTSQHKIKQLSAGSNTSAALT 182

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G +G  +  ++  P +V   K +  +  +CG +H+A V         
Sbjct: 183 EDGELFMWGDNSEGQIGLQNITNMCVPHQVTVGKPISWI--SCGYYHSAFVT-------- 232

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
               + G+L+T+G+ + G+LG   K      VP  V  + E    QV+CG   TV LT  
Sbjct: 233 ----TEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISE-KVIQVACGGGHTVVLTEK 287

Query: 475 GHVYTMGSPVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             VYT G   +GQLG      +   P  +E    K  +  + CG+ H A++T    +YT+
Sbjct: 288 A-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKK-ISHVCCGENHTALITESGLLYTF 345

Query: 533 GKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           G G +G+LG G  +  N   P+L        V  + CG
Sbjct: 346 GDGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACG 383



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 203/440 (46%), Gaps = 37/440 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  +++     V+ +ACG  H  ++T  G+V++ G    G+LG G   + S   LI    
Sbjct: 104 PTCIKALKPEKVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFT 163

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G+++ WG ++   G +G  N  ++ +P ++     G  +
Sbjct: 164 SQHKIKQLSAGSNTSAALTEDGELFMWGDNSE--GQIGLQNITNMCVPHQVTV---GKPI 218

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+TFG+   G LG   ++ V+   P+ V  +   + ++ ACG
Sbjct: 219 SWISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISE-KVIQVACG 277

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  + ++ +    
Sbjct: 278 GGHTVVLTEKAV-------------YTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKIS 324

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            V CG + T  +T +G +YT G   +G+LG   +  AN  LPT     L K  V  +ACG
Sbjct: 325 HVCCGENHTALITESGLLYTFGDGRHGKLGLGMENFANQFLPTLCSNFL-KYIVHLVACG 383

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAAI 575
             H+ V        T   G    +   + DD   PS +   + D  +++I+   S +A +
Sbjct: 384 GCHMLVFA------TPRLGMAEDIESDEIDDYCLPSAIYVPISDPPLENIL-QRSLSARV 436

Query: 576 CLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNK-PY 634
              K     D    +G   P      +  C++  L+   + S+   ++ +++ N N  P 
Sbjct: 437 RRRKREKSPDSIRMTGTLPPVEGTSPQPICFSPHLI-PFSMSASNLLEKTISENENSMPP 495

Query: 635 RVCDNCFGKLTKATETSSSS 654
              D    K+TK  +T S S
Sbjct: 496 MEPDYFQHKMTKEKDTDSLS 515



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA 514
           E   C V   H     +  +G V+T G   + +         +P++   K  K+    ++
Sbjct: 21  EARLCDV---HQCEWGIEDSGAVFTFGKTKFAE--------NIPSKFWFK--KDIPISLS 67

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           CGD H A+ T   +++ +G    G+LG G     N P+ ++ALK ++VK + CG + T  
Sbjct: 68  CGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHTLV 127

Query: 575 I 575
           +
Sbjct: 128 L 128


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 163/337 (48%), Gaps = 28/337 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVAC- 292
           ++ +  G    A++T  G V + G    G+ GHG  D  V   + I AL++  V+ +   
Sbjct: 383 IRQVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINAS 442

Query: 293 -GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSCGPW 350
            G  H  A+T +G  Y+WG ++   G LGH N    L+LPK +    E   + S +    
Sbjct: 443 NGCEHLIAITDTGLAYSWGYND--RGQLGHENVGTKLYLPKLIESIKEK-KMKSAAVSYH 499

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           H+A+V+ +G+L+TFG    G LG       STP+ V +L G      +CG++H       
Sbjct: 500 HSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVL---- 555

Query: 411 MVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN--FCQVSCGHSL 467
                    C+ SG++FT G  D G+LG G  +   VPT V   V PN   C V+CG+  
Sbjct: 556 ---------CTISGEVFTCGKNDHGQLGLGHNKQVKVPTQV---VLPNELVCFVACGYYH 603

Query: 468 TVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
             A+T+TG  Y+ G   YGQLG   K +  +P  +        V   ACG YH  +++  
Sbjct: 604 ATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHA-ACGCYHTLLMSDS 662

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
            +V+ +G+   G+LG+    D   P  ++   +K ++
Sbjct: 663 GQVFVFGRNNKGQLGNRGNTDSLLPVPLKVRPEKNMR 699



 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 159/343 (46%), Gaps = 27/343 (7%)

Query: 194 IWGECTGDGI-LGGGIHRSGSYAGVKMDSFVP-----KAVESAVVLDVQNIACGGRHAAL 247
           I    T DG+ L  G+++SG       D  V      +A+ S  V  + N + G  H   
Sbjct: 392 ILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYI-NASNGCEHLIA 450

Query: 248 VTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
           +T  G  +SWG    G+LGH  V + +  PKLI+++K   ++  A   HH+  V++SG++
Sbjct: 451 ITDTGLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGEL 510

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           YT+G ++C    L H    S     +L   L G HVS VSCG +H  + T +G++FT G 
Sbjct: 511 YTFGMNDCGQLGLDHTQHQS---TPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGK 567

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
              G LG G    V  P +V  L        ACG +H  A+             S+G  +
Sbjct: 568 NDHGQLGLGHNKQVKVPTQV-VLPNELVCFVACGYYHATAIT------------STGLTY 614

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           ++G  D G+LG G K  + +P  +           +CG   T+ ++ +G V+  G    G
Sbjct: 615 SFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKG 674

Query: 487 QLGDP-KANGKLPTRVEGKLTKNFVE--EIACGDYHVAVLTSR 526
           QLG+    +  LP  ++ +  KN      IA G Y  +++  R
Sbjct: 675 QLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAAGFYTTSLIVER 717



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 149/332 (44%), Gaps = 32/332 (9%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVAC- 292
            +Q+IA G     ++ K G VF+ G    G+ G G  D  +  P  I AL  I + +VA  
Sbjct: 3168 IQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAAS 3227

Query: 293  -GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPW 350
             G  H  A++  G +Y+WG +  + G LG G  +S    P+ +    E   ++  +    
Sbjct: 3228 NGCEHMLAISHDGAVYSWGYN--DRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYH 3285

Query: 351  HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            H+AVV++ G L TFG    G LG        TP+ V++L   +  R ACG++HT A+V+ 
Sbjct: 3286 HSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVD- 3344

Query: 411  MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP---------NFCQV 461
                        G ++++G  + G+LG    +   VP  V     P            QV
Sbjct: 3345 -----------DGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQV 3393

Query: 462  SCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
             CG+  TV +   G V T G   YGQLG   K +  +   V   LT   V+  +CG YH 
Sbjct: 3394 YCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSR-VKRASCGCYHT 3452

Query: 521  AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
             +L        +G+   G+LG      R+ PS
Sbjct: 3453 LLLLVNGRPMVFGRNNKGQLG---VASRSLPS 3481



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 152/360 (42%), Gaps = 46/360 (12%)

Query: 202  GILGGGIHRSGSYAGVKMDS--FVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSW 257
             +   G+++SG       D    VP  + +   + +  +A   G  H   ++  G V+SW
Sbjct: 3186 AVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSW 3245

Query: 258  GEELGGRLGHGVDSDVSH-PKLIDALKN-INVELVACGEHHTCAVTLSGDMYTWGGSNCN 315
            G    G+LG G     SH P++I++L+    +   A   HH+  V+ +GD+ T+G ++  
Sbjct: 3246 GYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDS- 3304

Query: 316  FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
             G LG  +      P+ L   L    V  V+CG +HT  +   G +++FG   +G LG  
Sbjct: 3305 -GQLGLDHTQHQHTPQ-LVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLS 3362

Query: 376  DRISVSTPREVDSLKGLRT---------VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
               +   P  V      RT         V+  CG +HT  ++E             GK+ 
Sbjct: 3363 HTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILEC------------GKVV 3410

Query: 427  TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            TWG  D G+LG G KE + +   V   +     + SCG   T+ L   G     G    G
Sbjct: 3411 TWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVNGRPMVFGRNNKG 3470

Query: 487  QLGDPKANGKLPT------RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            QLG   A+  LP+           L+ + V  I+ G Y   +LT        GK AN +L
Sbjct: 3471 QLG--VASRSLPSADLPLPIPLHPLSSDEVVYISAGFYCSYILT--------GKEANDQL 3520



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 148/330 (44%), Gaps = 30/330 (9%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           GE++S G+   G LG G D +      +      ++  V  G      +T  G + T G 
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCGL 407

Query: 312 SNCNFGLLGHGN--EMSLWLPKKLNGPLEGIHVSSV-----SCGPWHTAVVTSAGQLFTF 364
           +    G  GHGN  E  + L      P++ +    V     S G  H   +T  G  +++
Sbjct: 408 NKS--GQCGHGNFDERVMLL-----RPIQALRSHRVKYINASNGCEHLIAITDTGLAYSW 460

Query: 365 GDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           G    G LGH +    +  P+ ++S+K  + +++A   +H +A+V V           SG
Sbjct: 461 GYNDRGQLGHENVGTKLYLPKLIESIKE-KKMKSAAVSYHHSALVSV-----------SG 508

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           +L+T+G  D G+LG    + +  P  V AL+  +   VSCG    V  T +G V+T G  
Sbjct: 509 ELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKN 568

Query: 484 VYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            +GQLG       K+PT+V   L    V  +ACG YH   +TS    Y++G+   G+LG 
Sbjct: 569 DHGQLGLGHNKQVKVPTQV--VLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGI 626

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           G    +N P  +    + ++    CG   T
Sbjct: 627 GSKIHQNIPIALTISSNTRMVHAACGCYHT 656



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 150/342 (43%), Gaps = 27/342 (7%)

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            ++ E+FS G+   G L  G  +  +  +        +++ +A G      +   G ++T 
Sbjct: 3131 EECEIFSCGQNNYGELCLGHCNPTNKLERASFFSYKSIQSIAGGNEVLVVLMKDGAVFTC 3190

Query: 310  GGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSV--SCGPWHTAVVTSAGQLFTFGD 366
            G +    G  G GN +  L +P  +   L GI ++ V  S G  H   ++  G ++++G 
Sbjct: 3191 GLNKS--GQCGIGNFDERLIVPSPIPA-LSGIPITMVAASNGCEHMLAISHDGAVYSWGY 3247

Query: 367  GTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
               G LG G  +S S TPR ++SL+    +  A   +H +AVV            ++G L
Sbjct: 3248 NDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVS-----------NNGDL 3296

Query: 426  FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
             T+G  D G+LG    + +  P  V  L      +V+CG   TVA+   G VY+ G   Y
Sbjct: 3297 LTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEY 3356

Query: 486  GQLG-DPKANGKLPTRVEGKLTK--------NFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            GQLG     N K+P  V+             N   ++ CG YH   +    +V TWG+  
Sbjct: 3357 GQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRND 3416

Query: 537  NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
             G+LG G  + ++    V      +VK   CG   T  + ++
Sbjct: 3417 YGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVN 3458



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 22/277 (7%)

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHTAVVTSAGQLF 362
           G++Y+ G ++  +G LG G+++     +  + PL G  H+  V  G    A++TS G + 
Sbjct: 348 GELYSCGQNS--YGELGLGDDIER--HQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVL 403

Query: 363 TFGDGTFGVLGHG---DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
           T G    G  GHG   +R+ +  P +      ++ + A+ G  H  A+ +          
Sbjct: 404 TCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITD---------- 453

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
             +G  ++WG  DRG+LGH +   +L +P  + ++ E      +  +  +  ++ +G +Y
Sbjct: 454 --TGLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELY 511

Query: 479 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
           T G    GQLG      +   ++   L  + V  ++CG YH+ + T   EV+T GK  +G
Sbjct: 512 TFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHG 571

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG G       P+ V  L ++ V  + CG     AI
Sbjct: 572 QLGLGHNKQVKVPTQV-VLPNELVCFVACGYYHATAI 607



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 30/256 (11%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+ WG     G LG G   S S+    ++S   K         +   A    H+A+V+
Sbjct: 3240 GAVYSWGY-NDRGQLGLGTTVSKSHTPRVIESLREKYF-------ITFAAVSYHHSAVVS 3291

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G++ ++G    G+LG         P+L++ L +  V  VACG +HT A+   GD+Y++
Sbjct: 3292 NNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSF 3351

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGP-------LEGIHVS-SVSCGPWHTAVVTSAGQL 361
            G +   +G LG  +  +  +P  +  P       L+ ++ +  V CG +HT  +   G++
Sbjct: 3352 GKN--EYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKV 3409

Query: 362  FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
             T+G   +G LG G +   S  + V      R  RA+CG +HT  ++             
Sbjct: 3410 VTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLL------------V 3457

Query: 422  SGKLFTWGDGDRGRLG 437
            +G+   +G  ++G+LG
Sbjct: 3458 NGRPMVFGRNNKGQLG 3473



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 4/148 (2%)

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
           S G+L++ G    G LG GD   R   T V      +  QV  G+ +   LT+ G V T 
Sbjct: 346 SFGELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTC 405

Query: 481 GSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGAN 537
           G    GQ G    + + +  R    L  + V+ I    G  H+  +T     Y+WG    
Sbjct: 406 GLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465

Query: 538 GRLGHGDTDDRNF-PSLVEALKDKQVKS 564
           G+LGH +   + + P L+E++K+K++KS
Sbjct: 466 GQLGHENVGTKLYLPKLIESIKEKKMKS 493


>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
          Length = 815

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 168/339 (49%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H+A+VT   +++ +G    G+LG G  S VS P  + ALK   V+L ACG +HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G++Y  GG+  N G LG G+         ++       +  +S G   +A +T 
Sbjct: 100 LVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V          
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
              + G+L+ +G+ + G+LG  ++       P  V+ + E    QV+CG   TV LT   
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA 262

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VYT G   +GQLG       L    E K+ +N  ++    I+CG+ H A++T    +YT
Sbjct: 263 -VYTFGLGQFGQLG---LGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYT 318

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N   P+L        VK + CG
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 150/309 (48%), Gaps = 27/309 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + +   +I    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G ++ WG +  + G +G  N  ++ +P+++     G  V
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDN--SEGQIGLKNVSNVCVPQQVTI---GKPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+ FG+   G LG  +++  +  TP+ V  +   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  +  + +    
Sbjct: 252 GEHTVVLTENAV-------------YTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            +SCG + T  +T  G +YT G   +G+LG   +   N  +PT     L +  V+ +ACG
Sbjct: 299 YISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL-RFIVKLVACG 357

Query: 517 DYHVAVLTS 525
             H+ V  +
Sbjct: 358 GCHMVVFAA 366



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 46/269 (17%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTG----------HLKGLSGDTFRV 168
           P KV L   +ACG  ++L S          G ++G+ G          H+        ++
Sbjct: 86  PEKVKL---AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI 142

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
              SA S++S     D     G +F+WG+             S    G+K  S V    +
Sbjct: 143 KQLSAGSNTSAALTED-----GRLFMWGD------------NSEGQIGLKNVSNVCVPQQ 185

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNIN 286
             +   V  I+CG  H+A VT  GE++ +GE   G+LG  + +  +   P+L+  +    
Sbjct: 186 VTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           ++ VACG  HT  +T +  +YT+G     FG LG G  +      K+   +    +S +S
Sbjct: 246 IQ-VACGGEHTVVLTENA-VYTFGLG--QFGQLGLGTFLFETSEPKVIENIRDQTISYIS 301

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           CG  HTA++T  G ++TFGDG  G LG G
Sbjct: 302 CGENHTALITDIGLMYTFGDGRHGKLGLG 330



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G     + P+ V+ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99


>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 608

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 169/352 (48%), Gaps = 55/352 (15%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  S +S P  I ALK   V+L ACG +HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGN--------EMSLWLPKKLNGPLEGIHVSSVSCGP 349
              T +G +Y  GG+N   G LG G+        ++  + P  +        +  +S G 
Sbjct: 138 LVSTDTGGVYAAGGNNE--GQLGLGDTDDRDTFHQIGFFTPSDI--------IKQLSAGA 187

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             +A +T  G+LF +GD + G +G  ++ +V  P EV   K +  +  +CG +H+A V  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSL 467
                      + G+L+T+G+ + G+LG  ++       P  V  + +    QV+CG   
Sbjct: 245 -----------TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPD-KVIQVACGGGH 292

Query: 468 TVALTTTGHVYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNFVEEIACGDY 518
           TV LT    VY  G   +GQLG         +PK        +  ++    +  I+CG+ 
Sbjct: 293 TVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPK--------IIDRIKDQKISHISCGEN 343

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           H A++T    +YT+G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 344 HTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 157/335 (46%), Gaps = 35/335 (10%)

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           +LV   G VF++G+    +    + S           KN     ++CG+ HT  VT +  
Sbjct: 44  SLVPDTGAVFTFGKT---KFAENIPSKF-------WFKNDVPICLSCGDEHTAIVTGNNK 93

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG  HT V T  G ++  G
Sbjct: 94  LYMFGSNN--WGQLGLGSKSAISKPTCIKA-LKPEKVKLAACGRNHTLVSTDTGGVYAAG 150

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGSSSSSNCSSGK 424
               G LG GD     T  ++        ++  + G   +AA+ E             GK
Sbjct: 151 GNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTE------------DGK 198

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           LF WGD   G++G  +K    +P  V   V      +SCG+  +  +TT G +YT G P 
Sbjct: 199 LFMWGDNSEGQIGLKNKSNVCIPHEVT--VGKPISWISCGYYHSAFVTTDGELYTFGEPE 256

Query: 485 YGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            G+LG P     N + P RV G   K  V ++ACG  H  VLT +  VY +G G  G+LG
Sbjct: 257 NGKLGLPNQLLINHRSPQRVLGIPDK--VIQVACGGGHTVVLTEKV-VYAFGLGQFGQLG 313

Query: 542 HGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G    + + P +++ +KD+++  I CG + TA +
Sbjct: 314 LGTFLFETSEPKIIDRIKDQKISHISCGENHTALM 348



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 149/310 (48%), Gaps = 29/310 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           P  +++     V+  ACG  H  + T  G V++ G    G+LG G   D D  H      
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT 175

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
             +I ++ ++ G + + A+T  G ++ WG ++   G +G  N+ ++ +P ++     G  
Sbjct: 176 PSDI-IKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLKNKSNVCIPHEVT---VGKP 229

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAAC 399
           +S +SCG +H+A VT+ G+L+TFG+   G LG  +++ ++  +P+ V  +   + ++ AC
Sbjct: 230 ISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPD-KVIQVAC 288

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNF 458
           G  HT  + E +V             + +G G  G+LG G        P  +  + +   
Sbjct: 289 GGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKI 335

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIAC 515
             +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L K  V+ IAC
Sbjct: 336 SHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFL-KFTVQLIAC 394

Query: 516 GDYHVAVLTS 525
           G  H+ V  +
Sbjct: 395 GGCHMLVFAT 404



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 20/229 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F+WG+             S    G+K  S V    E  V   +  I+CG  H+A VT
Sbjct: 197 GKLFMWGD------------NSEGQIGLKNKSNVCIPHEVTVGKPISWISCGYYHSAFVT 244

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
             GE++++GE   G+LG      ++H  P+ +  + +  ++ VACG  HT  +T    +Y
Sbjct: 245 TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLT-EKVVY 302

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +G     FG LG G  +      K+   ++   +S +SCG  HTA++T  G ++TFGDG
Sbjct: 303 AFGLG--QFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDG 360

Query: 368 TFGVLGHG--DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
             G LG G  +  +   P    +         ACG  H        +G+
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVFATPRLGT 409



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 16/143 (11%)

Query: 435 RLGHGDKEARLVPTCVAALVEPNFCQV---SCGHSLTVALTT-TGHVYTMGSPVYGQLGD 490
           R G G     L P  VA  V P   Q+   + G +   +L   TG V+T G   + +   
Sbjct: 6   RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFTFGKTKFAE--- 62

Query: 491 PKANGKLPTRVEGKLTKNFVEE-IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
                 +P++      KN V   ++CGD H A++T   ++Y +G    G+LG G     +
Sbjct: 63  -----NIPSKF---WFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS 114

Query: 550 FPSLVEALKDKQVKSIVCGTSFT 572
            P+ ++ALK ++VK   CG + T
Sbjct: 115 KPTCIKALKPEKVKLAACGRNHT 137


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 170/352 (48%), Gaps = 36/352 (10%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           ++   A G RH+ L+     V S G+   G+LG         P+ I AL+ + V+LV+CG
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCG 83

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           + H+ AV   G ++ WG GS    G +G   E+S + PKK+   L GI +  VSCG +H+
Sbjct: 84  KEHSLAVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHS 140

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             ++   Q+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+    
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---- 196

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLT 468
                 S C  G  F WG    G+L    +   +    P  V AL       +SCG + T
Sbjct: 197 ------SLC--GTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248

Query: 469 VALTTTGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVL 523
             LT  G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A +
Sbjct: 249 AVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYV 303

Query: 524 TSRTEVYTWGKGAN--GRLGHGDTDDRNF--PSLV--EALKDKQVKSIVCGT 569
            +  +V ++G G +   +  H +    NF    L+  E L D  VK I  GT
Sbjct: 304 HTTGQVVSFGHGPSDTSKPTHSEALTENFDISCLISAEDLVDVHVKHIFAGT 355



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 135/278 (48%), Gaps = 28/278 (10%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKG------LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V L S     S    H      G V
Sbjct: 46  SCGD----NSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHK-----GRV 96

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG    +G LG G          K  SF PK + +   + +  ++CG  H+  ++K  
Sbjct: 97  FAWG-AGSEGQLGIG--------EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDS 147

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + W G
Sbjct: 148 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW-G 206

Query: 312 SNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           SN +  L   G  + +   K L+ G L+ + V  +SCG  HTAV+T  G++FTFGD   G
Sbjct: 207 SNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSG 266

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            LG+        P+ V+ + GL + +  CG +HT A V
Sbjct: 267 QLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYV 303



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   + P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  ++G+L   G       N P  V ALK+  V  I CG +
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 6/112 (5%)

Query: 204 LGGGIHRSGSYA----GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
            G G + SG  A     V + S  P +V +   L V  I+CG  H A++T+ G+VF++G+
Sbjct: 203 FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGD 262

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 310
              G+LG+    +   P+L++ +  + V  + CG +HT A V  +G + ++G
Sbjct: 263 NRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 170/352 (48%), Gaps = 36/352 (10%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           ++   A G RH+ L+     V S G+   G+LG         P+ I AL+ + V+LV+CG
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCG 83

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           + H+ AV   G ++ WG GS    G +G   E+S + PKK+   L GI +  VSCG +H+
Sbjct: 84  KEHSLAVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHS 140

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             ++   Q+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+    
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---- 196

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLT 468
                 S C  G  F WG    G+L    +   +    P  V AL       +SCG + T
Sbjct: 197 ------SLC--GTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248

Query: 469 VALTTTGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVL 523
             LT  G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A +
Sbjct: 249 AVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYV 303

Query: 524 TSRTEVYTWGKGAN--GRLGHGDTDDRNF--PSLV--EALKDKQVKSIVCGT 569
            +  +V ++G G +   +  H +    NF    L+  E L D  VK I  GT
Sbjct: 304 HTTGQVVSFGHGPSDTSKPTHSEALTENFDISCLISAEDLVDVHVKHIFAGT 355



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 135/278 (48%), Gaps = 28/278 (10%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKG------LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V L S     S    H      G V
Sbjct: 46  SCGD----NSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHK-----GRV 96

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG    +G LG G          K  SF PK + +   + +  ++CG  H+  ++K  
Sbjct: 97  FAWG-AGSEGQLGIG--------EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDS 147

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + W G
Sbjct: 148 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW-G 206

Query: 312 SNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           SN +  L   G  + +   K L+ G L+ + V  +SCG  HTAV+T  G++FTFGD   G
Sbjct: 207 SNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSG 266

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            LG+        P+ V+ + GL + +  CG +HT A V
Sbjct: 267 QLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYV 303



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   + P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  ++G+L   G       N P  V ALK+  V  I CG +
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 6/112 (5%)

Query: 204 LGGGIHRSGSYA----GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
            G G + SG  A     V + S  P +V +   L V  I+CG  H A++T+ G+VF++G+
Sbjct: 203 FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGD 262

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 310
              G+LG+    +   P+L++ +  + V  + CG +HT A V  +G + ++G
Sbjct: 263 NRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
           musculus]
 gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
          Length = 972

 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 164/339 (48%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  + +  P  I ALK   V+L ACG +HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T +G +Y  GG+N     LG  ++   +       P + I    +S G   +A +T 
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 195

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  D+ +V  P EV   K +  +  +CG +H+A V          
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 244

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                G+L+T+G+ + G+LG  ++       P  V  + E    QV+CG   TV LT   
Sbjct: 245 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK- 299

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VY  G   +GQLG       L    E K+ +   ++    I+CG+ H A++T    +YT
Sbjct: 300 VVYAFGLGQFGQLG---LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYT 356

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 155/334 (46%), Gaps = 33/334 (9%)

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           +LV   G VF++G+    +    + S           KN     ++CG+ HT  VT +  
Sbjct: 44  SLVPDTGAVFTFGK---TKFAENIPSKF-------WFKNDIPICLSCGDEHTAIVTGNNK 93

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG  HT V T  G ++  G
Sbjct: 94  LYMFGSNN--WGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGRNHTLVSTDTGGVYAAG 150

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
               G LG GD     T  ++       T++      +T+A +              GKL
Sbjct: 151 GNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAAL-----------TEDGKL 199

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           F WGD   G++G  DK    +P  V   V      +SCG+  +  +T  G +YT G P  
Sbjct: 200 FMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSAFVTMDGELYTFGEPEN 257

Query: 486 GQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
           G+LG P     N + P RV G   +  V ++ACG  H  VLT +  VY +G G  G+LG 
Sbjct: 258 GKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTEKV-VYAFGLGQFGQLGL 314

Query: 543 GD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G    + + P ++E +KD+++  I CG + TA +
Sbjct: 315 GTFLFETSEPKIIERIKDQKICHISCGENHTALM 348



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 152/322 (47%), Gaps = 37/322 (11%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDV 273
           G K     P  +++     V+  ACG  H  + T  G V++ G    G+LG G   D D 
Sbjct: 108 GSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT 167

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            H +++       ++ ++ G + + A+T  G ++ WG ++   G +G  ++ ++ +P ++
Sbjct: 168 FH-QIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEV 224

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKG 391
                G  +S +SCG +H+A VT  G+L+TFG+   G LG  + + ++  +P+ V  +  
Sbjct: 225 TV---GKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE 281

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCV 450
            R ++ ACG  HT  + E +V             + +G G  G+LG G        P  +
Sbjct: 282 -RVIQVACGGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKII 327

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTK 507
             + +   C +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L  
Sbjct: 328 ERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPT-----LCS 382

Query: 508 NF----VEEIACGDYHVAVLTS 525
           NF    V+ IACG  H+ V  +
Sbjct: 383 NFLRFAVQLIACGGCHMLVFAT 404



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 36/264 (13%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTGHLKGLSGDTFR--VSLSSAVSS 176
           P KV L   +ACG  ++L S          G ++G+ G       DTF   V  + A + 
Sbjct: 124 PEKVKL---AACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI 180

Query: 177 SSQGSGHDDGDSL---GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
               +G +   +L   G +F+WG+             S    G++  S V    E  V  
Sbjct: 181 KQLSAGANTSAALTEDGKLFMWGD------------NSEGQIGLEDKSNVCIPHEVTVGK 228

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVA 291
            +  I+CG  H+A VT  GE++++GE   G+LG   +  ++H  P+ +  +    ++ VA
Sbjct: 229 PISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VA 287

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           CG  HT  +T    +Y +G     FG LG G  +      K+   ++   +  +SCG  H
Sbjct: 288 CGGGHTVVLT-EKVVYAFGLG--QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENH 344

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG 375
           TA++T  G L+TFGDG  G LG G
Sbjct: 345 TALMTELGLLYTFGDGRHGKLGLG 368


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 161/345 (46%), Gaps = 25/345 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLIDALKNINVELVAC- 292
           +++IA G    A+V K G VF+ G    G+ G+G  +  V     + AL  I + +VA  
Sbjct: 504 IRDIAGGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAA 563

Query: 293 -GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPW 350
            G  H  AV   G +Y+WG ++   G LG G+ +S    P+ ++   E  H+++ +    
Sbjct: 564 NGCEHMLAVASDGAVYSWGYND--RGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYH 621

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           H+AVV+S G+L  FG    G LG        TP+ VDSL        ACG++HT A+   
Sbjct: 622 HSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAIT-- 679

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV---EPNFCQVSCGHSL 467
                     S G+++++G  D G+LG G      VPT V   +   +     VSCG+  
Sbjct: 680 ----------SGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYH 729

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           TV ++  G + T G   YGQLG    + K   +       + ++  +CG YH  +L S  
Sbjct: 730 TVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSNG 789

Query: 528 EVYTWGKGANGRLGHGD----TDDRNFPSLVEALKDKQVKSIVCG 568
            V  +G+   G+LG G     + D   P    +L + +V  I  G
Sbjct: 790 RVMVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAG 834



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 152/318 (47%), Gaps = 34/318 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDAL 282
           P    S +V+++   A G  H   V   G V+SWG    G+LG G     SH P++ID+L
Sbjct: 548 PVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSL 607

Query: 283 KN-INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           +   ++   A   HH+  V+ +G++  +G ++C  G LG  +      P+ ++  L    
Sbjct: 608 REKYHITTAAVSYHHSAVVSSNGELLMFGMNDC--GQLGLDHTQHQHTPQLVDS-LSSQV 664

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL---RTVRAA 398
           ++ V+CG +HT  +TS G++++FG   +G LG G   ++  P  V +  G    + V  +
Sbjct: 665 ITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVS 724

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE----ARLVPTCVAALV 454
           CG +HT  + E             GKL TWG  D G+LG G K+    A+ VP  +++ +
Sbjct: 725 CGYYHTVTISE------------KGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKI 772

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-----PKANGKLPTRVEGKLTKNF 509
           +      SCG   T+ L + G V   G    GQLG      P A+  LP      L  + 
Sbjct: 773 K----TASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSRTLPSADLPLPVP-SNSLANDE 827

Query: 510 VEEIACGDYHVAVLTSRT 527
           V  IA G Y   +LT R+
Sbjct: 828 VVRIAAGFYSSYILTGRS 845



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 151/329 (45%), Gaps = 19/329 (5%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           E+FS G+   G L  G  +  S  + +       +  +A G      V   G ++T G +
Sbjct: 470 ELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVVMKDGAVFTCGLN 529

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFGDGTFG 370
               G  G+G      +       L GI ++ V+   G  H   V S G ++++G    G
Sbjct: 530 KS--GQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRG 587

Query: 371 VLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG G  IS S TPR +DSL+    +  A   +H +AVV            S+G+L  +G
Sbjct: 588 QLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVS-----------SNGELLMFG 636

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
             D G+LG    + +  P  V +L      +V+CG   T+A+T+ G VY+ G   YGQLG
Sbjct: 637 MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLG 696

Query: 490 DPKA-NGKLPTRVEGKL--TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
              A N K+PT V+  L  +   +  ++CG YH   ++ + ++ TWG+   G+LG G  D
Sbjct: 697 LGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKD 756

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +N    V      ++K+  CG   T  +
Sbjct: 757 HKNSAQYVPLPLSSKIKTASCGCYHTLIL 785



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 24/254 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG     G LG G   S S+    +DS   K         +   A    H+A+V+
Sbjct: 576 GAVYSWGY-NDRGQLGLGSTISKSHTPRMIDSLREK-------YHITTAAVSYHHSAVVS 627

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             GE+  +G    G+LG         P+L+D+L +  +  VACG +HT A+T  G++Y++
Sbjct: 628 SNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSF 687

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPL--EGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           G +  ++G LG G+  ++ +P  +   L      + +VSCG +HT  ++  G+L T+G  
Sbjct: 688 GKN--DYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRN 745

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +G LG G +   ++ + V      +   A+CG +HT  ++            S+G++  
Sbjct: 746 DYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILM------------SNGRVMV 793

Query: 428 WGDGDRGRLGHGDK 441
           +G  ++G+LG G +
Sbjct: 794 FGRNNKGQLGAGSR 807


>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
          Length = 371

 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 137/272 (50%), Gaps = 27/272 (9%)

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           MY WG       LLG G  + +  P+K+N  LEG  V+ VS G  H A +   G +F +G
Sbjct: 56  MYCWG-------LLGLGETLDVLYPQKVN--LEG--VTCVSAGHRHAAAIVGGGDVFVWG 104

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            G  G LG G   S  TP+ +     ++ +  +CG  H+  + E             G+L
Sbjct: 105 RGFSGQLGLGTNKSHFTPQPLSFPMPVKAL--SCGGSHSLFITE------------DGRL 150

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS-CGHSLTVALTTTGHVYTMGSPV 484
           +  G G  G+LG G +E+ L P  V         + + CG   +V  T +G V+T GS  
Sbjct: 151 YATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSDD 210

Query: 485 YGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           YGQLG  + A   +  +    L    V  IA GDYH A +TS  ++YTWG G +G+LG+G
Sbjct: 211 YGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNG 270

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +T D + P LV  L++ +V+S+ CG   T A+
Sbjct: 271 NTVDVSLPVLVRELQNLRVQSVACGCDHTVAV 302



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 147/289 (50%), Gaps = 28/289 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GDVF+WG     G LG G ++S          F P+ +  +  + V+ ++CGG H+  +T
Sbjct: 98  GDVFVWGRGF-SGQLGLGTNKS---------HFTPQPL--SFPMPVKALSCGGSHSLFIT 145

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYT 308
           + G +++ G    G+LG G    V  P  +   +    V+   CG+  +   T SG ++T
Sbjct: 146 EDGRLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFT 205

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           +G  +  +G LG G      +  K    L G +V S++ G +H A VTS G+L+T+G G 
Sbjct: 206 FGSDD--YGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGR 263

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV------EVMVGSSSSSNCSS 422
            G LG+G+ + VS P  V  L+ LR    ACG  HT AV+      ++M+   SS    S
Sbjct: 264 SGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKEQLML--ISSQVLES 321

Query: 423 GKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
           G++F  G G  G+LG GD  E+  V   V   V+    QV+CG S T+A
Sbjct: 322 GEVFVMGRGREGQLGRGDIVESPAVYRSVPLQVQ----QVACGTSHTLA 366



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 157/334 (47%), Gaps = 49/334 (14%)

Query: 263 GRLGHGVDSDVSHPKLIDALKNINVELVAC---GEHHTCAVTLSGDMYTWGGSNCNFGLL 319
           G LG G   DV +P+       +N+E V C   G  H  A+   GD++ WG      G L
Sbjct: 60  GLLGLGETLDVLYPQ------KVNLEGVTCVSAGHRHAAAIVGGGDVFVWGRGFS--GQL 111

Query: 320 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           G G   S + P+ L+ P+    V ++SCG  H+  +T  G+L+  G G  G LG G + S
Sbjct: 112 GLGTNKSHFTPQPLSFPMP---VKALSCGGSHSLFITEDGRLYATGRGKEGQLGTGSQES 168

Query: 380 VSTPREVDSLKGLRTVRAA-CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH 438
           V +P EV   +G   V+AA CG   +    E            SG++FT+G  D G+LG 
Sbjct: 169 VLSPVEVQMPEGSGRVKAAECGKDFSVIATE------------SGQVFTFGSDDYGQLGL 216

Query: 439 GD-KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGK 496
           G      + P  VA L   N   ++ G     A+T+ G +YT G    GQLG+    +  
Sbjct: 217 GQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVS 276

Query: 497 LPTRVEGKLTKNFVEEIACG-DYHVAVL---------------TSRTEVYTWGKGANGRL 540
           LP  V  +L    V+ +ACG D+ VAV+                   EV+  G+G  G+L
Sbjct: 277 LPVLVR-ELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQL 335

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G GD  +   P++  ++   QV+ + CGTS T A
Sbjct: 336 GRGDIVES--PAVYRSVP-LQVQQVACGTSHTLA 366



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 145/335 (43%), Gaps = 51/335 (15%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G  +D   P+ V    +  V  ++ G RHAA +   G+VF WG    G+LG G +     
Sbjct: 65  GETLDVLYPQKVN---LEGVTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTNKSHFT 121

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P+ +     + V+ ++CG  H+  +T  G +Y  G      G LG G++ S+  P ++  
Sbjct: 122 PQPLSF--PMPVKALSCGGSHSLFITEDGRLYATG--RGKEGQLGTGSQESVLSPVEVQM 177

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVDSLKGLRT 394
           P     V +  CG   + + T +GQ+FTFG   +G LG G     + TP+EV  L G   
Sbjct: 178 PEGSGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNV 237

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
              A G +H AAV             S GKL+TWG G  G+LG+G+     +P  V  L 
Sbjct: 238 RSIAAGDYHAAAVT------------SDGKLYTWGYGRSGQLGNGNTVDVSLPVLVRELQ 285

Query: 455 EPNFCQVSCGHSLTVALT----------------TTGHVYTMGSPVYGQLG------DPK 492
                 V+CG   TVA+                  +G V+ MG    GQLG       P 
Sbjct: 286 NLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRGDIVESPA 345

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
               +P +         V+++ACG  H      RT
Sbjct: 346 VYRSVPLQ---------VQQVACGTSHTLARGVRT 371


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 171/364 (46%), Gaps = 49/364 (13%)

Query: 244 HAALVTKQGEVFSWGEELGGRLGHGVDSD----VSHPKLIDALKNINVEL----VACGEH 295
           HA L    G V++WG    G+LG  + +D    V  P  ++A  ++++      +ACG  
Sbjct: 78  HAQLA---GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRA 134

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 355
           HT  + + G +Y+ G ++   G LGH    S   P++++  LE   ++ ++CG  H+  +
Sbjct: 135 HTLFL-VDGQVYSCGSNDQ--GQLGHKKHRSK--PERVDA-LEPYTITQIACGETHSLAL 188

Query: 356 TSAGQLFTFGDGTFGVLG-------------------------HGDRISVSTPREVDSLK 390
           TS GQ+F +GD     LG                           D +  +T   +D + 
Sbjct: 189 TSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMT 248

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GKLFTWGDGDRGRLGHGDKEARLVPTC 449
             R VRA  G      +V+++ G++ S   S  G +F WGD   G+L   + +   VPT 
Sbjct: 249 RPRLVRALTG----HKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTL 304

Query: 450 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKN 508
           V  L      Q++ G   T+ALT  G VY+ G+  +GQLG    A   +P+R++  L   
Sbjct: 305 VKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLK-TLEHQ 363

Query: 509 FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
           F   IACG+ H  VLT    VY++G G  G+LGHG   +   P ++  L  K    ++CG
Sbjct: 364 FCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLCG 423

Query: 569 TSFT 572
              T
Sbjct: 424 RRHT 427



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 181/424 (42%), Gaps = 67/424 (15%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQN------IACGGR 243
           G V+ WG  T DG LG  +    + A       VP+  E      V        IACG  
Sbjct: 83  GSVWAWGNPT-DGQLGLRLTNDHTLA-------VPEPTELEAFSSVSMSTLASAIACGRA 134

Query: 244 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
           H  L    G+V+S G    G+LGH      S P+ +DAL+   +  +ACGE H+ A+T +
Sbjct: 135 HT-LFLVDGQVYSCGSNDQGQLGH--KKHRSKPERVDALEPYTITQIACGETHSLALTSN 191

Query: 304 GDMYTWGGSNCN-FGL----------------------LGHGNE--------MSLWLPKK 332
           G ++ WG +  +  GL                      +   +E        M      +
Sbjct: 192 GQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPR 251

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 392
           L   L G  +  + CG   + V++  G +F +GD T G L   +  +V  P  V  L G+
Sbjct: 252 LVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGI 311

Query: 393 RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA 452
              + A G  HT A+              +G++++WG+   G+LG GD     +P+ +  
Sbjct: 312 PIRQLAAGGRHTLALT------------FNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKT 359

Query: 453 LVEPNFC-QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE 511
           L E  FC  ++CG   +V LT TG VY+ G+   GQLG      ++  R+  +L      
Sbjct: 360 L-EHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSAS 418

Query: 512 EIACGDYHVAVLTSRT-EVYTWGKGANGRLGHGDTDDRN----FPSLVEALKDKQVKSIV 566
           ++ CG  H  V   +T ++Y +G G NG+LG G   +       P LV  L    +  I 
Sbjct: 419 QVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVLDATPILRIA 478

Query: 567 CGTS 570
            G S
Sbjct: 479 TGAS 482



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 18/269 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+ V +     +  I CG   + +++++G+VF+WG+   G+L       V  P L+  L 
Sbjct: 250 PRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELY 309

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
            I +  +A G  HT A+T +G +Y+WG  N  FG LG G+     +P +L   LE    +
Sbjct: 310 GIPIRQLAAGGRHTLALTFNGQVYSWG--NNQFGQLGVGDTAPHTIPSRLKT-LEHQFCA 366

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            ++CG  H+ V+T  G +++FG G  G LGHG   +   PR +  L G    +  CG  H
Sbjct: 367 HIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLCGRRH 426

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG----DKEARLVPTCVAALVEPNFC 459
           T                 + K++ +G G  G+LG G     ++  L P  V  L      
Sbjct: 427 TIVFFP-----------KTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVLDATPIL 475

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           +++ G S +      G+   +G+    QL
Sbjct: 476 RIATGASASHCFAVVGNRNHVGAAESAQL 504



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 105/227 (46%), Gaps = 22/227 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           GDVF WG+ T           SG     ++ +  VP  V+    + ++ +A GGRH   +
Sbjct: 278 GDVFAWGDNT-----------SGQLCLRELKTVPVPTLVKELYGIPIRQLAAGGRHTLAL 326

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           T  G+V+SWG    G+LG G  +  + P  +  L++     +ACGE H+  +T +G +Y+
Sbjct: 327 TFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYS 386

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV-VTSAGQLFTFGDG 367
           +G      G LGHG   +   P+ +   L G   S V CG  HT V      +++ FG G
Sbjct: 387 FGAGGQ--GQLGHGTLQNEINPRMIF-ELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLG 443

Query: 368 TFGVLGHGDRIS----VSTPREVDSLKGLRTVRAACG--VWHTAAVV 408
             G LG G  +     V TP  V  L     +R A G    H  AVV
Sbjct: 444 GNGQLGTGVGVEPQQHVLTPMLVRVLDATPILRIATGASASHCFAVV 490


>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
          Length = 815

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 168/339 (49%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H+A+VT   +++ +G    G+LG G  S +S P  + ALK   V+L ACG +HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G++Y  GG+  N G LG G+         ++       +  +S G   +A +T 
Sbjct: 100 LVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V          
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
              + G+L+ +G+ + G+LG  ++       P  V+ + E    QV+CG   TV LT   
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA 262

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VYT G   +GQLG       L    E K+ +N  ++    I+CG+ H A++T    +YT
Sbjct: 263 -VYTFGLGQFGQLG---LGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYT 318

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N   P+L        VK + CG
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 150/309 (48%), Gaps = 27/309 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + +   +I    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G ++ WG +  + G +G  N  ++ +P+++     G  V
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDN--SEGQIGLKNVSNVCVPQQVTI---GKPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+ FG+   G LG  +++  +  TP+ V  +   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  +  + +    
Sbjct: 252 GEHTVVLTENAV-------------YTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            +SCG + T  +T  G +YT G   +G+LG   +   N  +PT     L +  V+ +ACG
Sbjct: 299 YISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL-RFIVKLVACG 357

Query: 517 DYHVAVLTS 525
             H+ V  +
Sbjct: 358 GCHMVVFAA 366



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 46/269 (17%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTG----------HLKGLSGDTFRV 168
           P KV L   +ACG  ++L S          G ++G+ G          H+        ++
Sbjct: 86  PEKVKL---AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI 142

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
              SA S++S     D     G +F+WG+             S    G+K  S V    +
Sbjct: 143 KQLSAGSNTSAALTED-----GRLFMWGD------------NSEGQIGLKNVSNVCVPQQ 185

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNIN 286
             +   V  I+CG  H+A VT  GE++ +GE   G+LG  + +  +   P+L+  +    
Sbjct: 186 VTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           ++ VACG  HT  +T +  +YT+G     FG LG G  +      K+   +    +S +S
Sbjct: 246 IQ-VACGGEHTVVLTENA-VYTFGLG--QFGQLGLGTFLFETSEPKVIENIRDQTISYIS 301

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           CG  HTA++T  G ++TFGDG  G LG G
Sbjct: 302 CGENHTALITDIGLMYTFGDGRHGKLGLG 330



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G     + P+ V+ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99


>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
           GTPase regulator-like [Equus caballus]
          Length = 915

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 166/337 (49%), Gaps = 25/337 (7%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           +ACG  H A+VT   +++ +G    G+LG G +S VS P  I ALK   V+ VACG  HT
Sbjct: 40  LACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G +Y  GG+  + G LG G++       ++        +  +S G   +A +T 
Sbjct: 100 IVATEGGKVYATGGN--SEGQLGLGDDEDRNTFHRIKFFTSQHKIKQLSAGSSSSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  +  +V  P +V   K +  V  +CG +H+A +          
Sbjct: 158 DGELFMWGDNSEGQIGLKNIDNVCVPHQVTIGKPISWV--SCGYYHSAFIT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
              + G+L+T+G+ + G+LG   K      +P  V  + E    QV+CG   TV LT   
Sbjct: 207 ---TEGELYTFGEPESGKLGLPSKLLINHRIPQLVPGIPE-KVIQVACGGGHTVVLTENA 262

Query: 476 HVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
            VYT G   +GQ  LG        PT +E  +    +  I+CG+ H A++T    +YT+G
Sbjct: 263 -VYTFGLGQFGQLGLGTFIFETSEPTVIE-HIKDQKISYISCGENHTALITDTGLIYTFG 320

Query: 534 KGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
            G +G+LG G  +  N   P+L  + +   V+ + CG
Sbjct: 321 DGRHGKLGLGLENFTNQFVPTLCCSSRRFIVQLVACG 357



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 156/333 (46%), Gaps = 33/333 (9%)

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
           +V   G VF++G+    R    + S           KN     +ACG+ HT  VT +  +
Sbjct: 7   VVPDSGAVFTFGK---TRFAENIPSKF-------WFKNDIPICLACGDEHTAVVTGNNKL 56

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           Y +G +N  +G LG G+E  +  P  +   L+   V  V+CG  HT V T  G+++  G 
Sbjct: 57  YMFGSNN--WGQLGLGSESPVSKPTCIKA-LKPEKVKFVACGRTHTIVATEGGKVYATGG 113

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
            + G LG GD    +T   +        ++       ++A +              G+LF
Sbjct: 114 NSEGQLGLGDDEDRNTFHRIKFFTSQHKIKQLSAGSSSSAAL-----------TEDGELF 162

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            WGD   G++G  + +   VP  V   +      VSCG+  +  +TT G +YT G P  G
Sbjct: 163 MWGDNSEGQIGLKNIDNVCVPHQVT--IGKPISWVSCGYYHSAFITTEGELYTFGEPESG 220

Query: 487 QLGDPKA---NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           +LG P     N ++P  V G   K  V ++ACG  H  VLT    VYT+G G  G+LG G
Sbjct: 221 KLGLPSKLLINHRIPQLVPGIPEK--VIQVACGGGHTVVLTENA-VYTFGLGQFGQLGLG 277

Query: 544 D-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               + + P+++E +KD+++  I CG + TA I
Sbjct: 278 TFIFETSEPTVIEHIKDQKISYISCGENHTALI 310



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 152/309 (49%), Gaps = 27/309 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  +++     V+ +ACG  H  + T+ G+V++ G    G+LG G D D +    I    
Sbjct: 78  PTCIKALKPEKVKFVACGRTHTIVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G   + A+T  G+++ WG +  + G +G  N  ++ +P ++     G  +
Sbjct: 138 SQHKIKQLSAGSSSSAALTEDGELFMWGDN--SEGQIGLKNIDNVCVPHQVTI---GKPI 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAACG 400
           S VSCG +H+A +T+ G+L+TFG+   G LG   ++ ++   P+ V  +   + ++ ACG
Sbjct: 193 SWVSCGYYHSAFITTEGELYTFGEPESGKLGLPSKLLINHRIPQLVPGIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        PT +  + +    
Sbjct: 252 GGHTVVLTENAV-------------YTFGLGQFGQLGLGTFIFETSEPTVIEHIKDQKIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            +SCG + T  +T TG +YT G   +G+LG   +   N  +PT       +  V+ +ACG
Sbjct: 299 YISCGENHTALITDTGLIYTFGDGRHGKLGLGLENFTNQFVPTLCCSS-RRFIVQLVACG 357

Query: 517 DYHVAVLTS 525
             H+ V  +
Sbjct: 358 GCHMLVFAT 366



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 7/92 (7%)

Query: 212 GSYAGVKMDSFVPKAVESAVVLDVQN-----IACGGRHAALVTKQGEVFSWGEELGGRLG 266
           G +  + + +F+ +  E  V+  +++     I+CG  H AL+T  G ++++G+   G+LG
Sbjct: 269 GQFGQLGLGTFIFETSEPTVIEHIKDQKISYISCGENHTALITDTGLIYTFGDGRHGKLG 328

Query: 267 HGVDSDVSH--PKLIDALKNINVELVACGEHH 296
            G+++  +   P L  + +   V+LVACG  H
Sbjct: 329 LGLENFTNQFVPTLCCSSRRFIVQLVACGGCH 360


>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
           sapiens]
 gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
 gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
 gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
          Length = 815

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 168/339 (49%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H+A+VT   +++ +G    G+LG G  S +S P  + ALK   V+L ACG +HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G++Y  GG+  N G LG G+         ++       +  +S G   +A +T 
Sbjct: 100 LVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V          
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
              + G+L+ +G+ + G+LG  ++       P  V+ + E    QV+CG   TV LT   
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA 262

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VYT G   +GQLG       L    E K+ +N  ++    I+CG+ H A++T    +YT
Sbjct: 263 -VYTFGLGQFGQLG---LGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYT 318

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N   P+L        VK + CG
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 150/309 (48%), Gaps = 27/309 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + +   +I    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G ++ WG +  + G +G  N  ++ +P+++     G  V
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDN--SEGQIGLKNVSNVCVPQQVTI---GKPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+ FG+   G LG  +++  +  TP+ V  +   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  +  + +    
Sbjct: 252 GEHTVVLTENAV-------------YTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            +SCG + T  +T  G +YT G   +G+LG   +   N  +PT     L +  V+ +ACG
Sbjct: 299 YISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL-RFIVKLVACG 357

Query: 517 DYHVAVLTS 525
             H+ V  +
Sbjct: 358 GCHMVVFAA 366



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 46/269 (17%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTG----------HLKGLSGDTFRV 168
           P KV L   +ACG  ++L S          G ++G+ G          H+        ++
Sbjct: 86  PEKVKL---AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI 142

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
              SA S++S     D     G +F+WG+             S    G+K  S V    +
Sbjct: 143 KQLSAGSNTSAALTED-----GRLFMWGD------------NSEGQIGLKNVSNVCVPQQ 185

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNIN 286
             +   V  I+CG  H+A VT  GE++ +GE   G+LG  + +  +   P+L+  +    
Sbjct: 186 VTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           ++ VACG  HT  +T +  +YT+G     FG LG G  +      K+   +    +S +S
Sbjct: 246 IQ-VACGGEHTVVLTENA-VYTFGLG--QFGQLGLGTFLFETSEPKVIENIRDQTISYIS 301

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           CG  HTA++T  G ++TFGDG  G LG G
Sbjct: 302 CGENHTALITDIGLMYTFGDGRHGKLGLG 330



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G     + P+ V+ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99


>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
 gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
          Length = 477

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 162/392 (41%), Gaps = 30/392 (7%)

Query: 165 TFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVP 224
           T   +LS + + +  G   D  D+   V  WG+   DG LG G            DS  P
Sbjct: 50  TLAQTLSVSPTVAQNGPSRDASDT---VLAWGDNK-DGELGDG---------TTTDSSTP 96

Query: 225 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN 284
            AV+      +  IA G  H+  VT  G   +WG  L G+LG G  +D S P  +D    
Sbjct: 97  IAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQLGDGSTTDSSTPIAVDLPAG 156

Query: 285 INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 344
             V  +A G+ H+ AVT +G    WG  + + G LG G       P  ++ P  G  V++
Sbjct: 157 TTVTAIAAGDDHSLAVTSAGTALAWG--DNDRGELGDGTTTRRDTPVDVDLP-AGTTVTA 213

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
           ++ G  H+  +TSAG + T+G  + G LG G     STP  VD   G      A G  H+
Sbjct: 214 IAAGIGHSLALTSAGTVLTWGLNSDGQLGDGTTTDSSTPIAVDLPAGTTVTAIAAGSLHS 273

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
            AV             ++G +  WG+   G+LG G       P  V          +  G
Sbjct: 274 LAV------------TTAGTILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDGG 321

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
              ++A+T+ G     G    GQLGD    N   P  V        V     G  H   +
Sbjct: 322 RDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVN-LPADTTVTATTAGSLHSLAV 380

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
           T+   +  WG  ++GRLG G T + + P  V 
Sbjct: 381 TTAGTILAWGNNSDGRLGDGTTTNSSTPIAVN 412



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 13/221 (5%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G V  WG    DG LG G            DS  P AV+      V  IA G  H+  
Sbjct: 226 SAGTVLTWG-LNSDGQLGDG---------TTTDSSTPIAVDLPAGTTVTAIAAGSLHSLA 275

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           VT  G + +WG    G+LG G  ++ S P  ++   +  +  +  G  H+ AVT +G   
Sbjct: 276 VTTAGTILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSAL 335

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG  + + G LG G   +   P  +N P +   V++ + G  H+  VT+AG +  +G+ 
Sbjct: 336 AWG--DNDDGQLGDGTTTNSSTPIAVNLPAD-TTVTATTAGSLHSLAVTTAGTILAWGNN 392

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           + G LG G   + STP  V+            G  H+ A+V
Sbjct: 393 SDGRLGDGTTTNSSTPIAVNLPADTTVTATTAGSAHSMALV 433


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 169/352 (48%), Gaps = 36/352 (10%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           ++   A G RH+ L+     V S G+   G+LG         P+ I AL+ + V+LV+CG
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCG 83

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           + H+ AV   G ++ WG GS    G +G   E+S + PKK+   L GI +  VSCG +H+
Sbjct: 84  KEHSLAVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHS 140

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             ++   Q+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+    
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFAL---- 196

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                 S C  G  F WG    G+L   G         P  + AL       +SCG   T
Sbjct: 197 ------SLC--GTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHT 248

Query: 469 VALTTTGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVL 523
             LT  G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A +
Sbjct: 249 AVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYV 303

Query: 524 TSRTEVYTWGKGAN--GRLGHGDTDDRNF--PSLV--EALKDKQVKSIVCGT 569
            +  +V ++G G +   +  H +    NF    L+  E L D QVK I  GT
Sbjct: 304 HTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDLVDVQVKHIFAGT 355



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 133/278 (47%), Gaps = 28/278 (10%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKG------LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V L S     S    H      G V
Sbjct: 46  SCGD----NSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHK-----GRV 96

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG    +G LG G          K  SF PK + +   + +  ++CG  H+  ++K  
Sbjct: 97  FAWG-AGSEGQLGIG--------EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDS 147

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + W G
Sbjct: 148 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGW-G 206

Query: 312 SNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           SN    L   G  +     K L+ G L+ + V  +SCG  HTAV+T  G++FTFGD   G
Sbjct: 207 SNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSG 266

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            LG+        P+ V+ + GL + +  CG +HT A V
Sbjct: 267 QLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYV 303



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   + P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  + G+L   G       N P  + ALK+  V  I CG  
Sbjct: 187 AAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDE 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 10/139 (7%)

Query: 174 VSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
           ++  + G  H    SL G  F WG  +      G +  SG    V   S  P ++ +   
Sbjct: 183 LAQVAAGGTHSFALSLCGTSFGWGSNSA-----GQLALSGR--NVPAQSNKPLSIGALKN 235

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L V  I+CG  H A++T+ G+VF++G+   G+LG+    +   P+L++ +  + V  + C
Sbjct: 236 LGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294

Query: 293 GEHHTCA-VTLSGDMYTWG 310
           G +HT A V  +G + ++G
Sbjct: 295 GSYHTLAYVHTTGQVVSFG 313


>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 1001

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 165/342 (48%), Gaps = 35/342 (10%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  + +  P  I ALK   V+L ACG +HT
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T +G +Y  GG+N     LG  ++   +       P + I    +S G   +A +T 
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  D+ +V  P EV   K +  +  +CG +H+A V          
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLV-----PTCVAALVEPNFCQVSCGHSLTVALT 472
                G+L+T+G+ + G+LG     + L+     P  V  + E    QV+CG   TV LT
Sbjct: 207 ---MDGELYTFGEPENGKLGLP---SELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLT 259

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTE 528
               VY  G   +GQLG       L    E K+ +   ++    I+CG+ H A++T    
Sbjct: 260 EKV-VYAFGLGQFGQLG---LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGL 315

Query: 529 VYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +YT+G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 316 LYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357



 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 140/290 (48%), Gaps = 23/290 (7%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           ++CG+ HT  VT +  +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG 
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNN--WGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGR 96

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            HT V T  G ++  G    G LG GD     T  ++       T++      +T+A + 
Sbjct: 97  NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAAL- 155

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
                        GKLF WGD   G++G  DK    +P  V   V      +SCG+  + 
Sbjct: 156 ----------TEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSA 203

Query: 470 ALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            +T  G +YT G P  G+LG P     N + P RV G   +  V ++ACG  H  VLT +
Sbjct: 204 FVTMDGELYTFGEPENGKLGLPSELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTEK 261

Query: 527 TEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             VY +G G  G+LG G    + + P ++E +KD+++  I CG + TA +
Sbjct: 262 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALM 310



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 151/322 (46%), Gaps = 37/322 (11%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDV 273
           G K     P  +++     V+  ACG  H  + T  G V++ G    G+LG G   D D 
Sbjct: 70  GSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT 129

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            H +++       ++ ++ G + + A+T  G ++ WG ++   G +G  ++ ++ +P ++
Sbjct: 130 FH-QIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEV 186

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKG 391
                G  +S +SCG +H+A VT  G+L+TFG+   G LG    + ++  +P+ V  +  
Sbjct: 187 TV---GKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPSELLMNHRSPQRVLGIPE 243

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCV 450
            R ++ ACG  HT  + E +V             + +G G  G+LG G        P  +
Sbjct: 244 -RVIQVACGGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKII 289

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTK 507
             + +   C +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L  
Sbjct: 290 ERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPT-----LCS 344

Query: 508 NF----VEEIACGDYHVAVLTS 525
           NF    V+ IACG  H+ V  +
Sbjct: 345 NFLRFAVQLIACGGCHMLVFAT 366



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 36/264 (13%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTGHLKGLSGDTFR--VSLSSAVSS 176
           P KV L   +ACG  ++L S          G ++G+ G       DTF   V  + A + 
Sbjct: 86  PEKVKL---AACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI 142

Query: 177 SSQGSGHDDGDSL---GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
               +G +   +L   G +F+WG+             S    G++  S V    E  V  
Sbjct: 143 KQLSAGANTSAALTEDGKLFMWGD------------NSEGQIGLEDKSNVCIPHEVTVGK 190

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVA 291
            +  I+CG  H+A VT  GE++++GE   G+LG   +  ++H  P+ +  +    ++ VA
Sbjct: 191 PISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPSELLMNHRSPQRVLGIPERVIQ-VA 249

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           CG  HT  +T    +Y +G     FG LG G  +      K+   ++   +  +SCG  H
Sbjct: 250 CGGGHTVVLT-EKVVYAFGLG--QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENH 306

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG 375
           TA++T  G L+TFGDG  G LG G
Sbjct: 307 TALMTELGLLYTFGDGRHGKLGLG 330


>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 445

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 159/350 (45%), Gaps = 44/350 (12%)

Query: 253 EVFSWGEELGGRLGHGVD---------------SDVSH-----PKLIDALKNINVELVAC 292
           ++FSWG    G+LG G++               SD S      P  IDA  +     ++C
Sbjct: 49  QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G  H+  +T+ GD++ WG  +   G LG G E S+++P  LN   E   +  ++ G  H+
Sbjct: 109 GLFHS-GLTIDGDLWIWGKGDG--GRLGFGQENSVFVPN-LNPLFEEHSIRCIALGGLHS 164

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  G +FT+G G FG LGH        PR VD     +    A    HTAA+ E   
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITE--- 221

Query: 413 GSSSSSNCSSGKLFTWG--DGDRGRLGH-----GDKEARLVPTCVAALVEPNFCQVSCGH 465
                    SG+L+ WG  +GD            +     VP+ V AL  P    VSCG 
Sbjct: 222 ---------SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-VASVSCGG 271

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             T+ALT  G ++  G+    +LG     G         L    + +IACG YH   LT 
Sbjct: 272 FFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE 331

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             +V +WG G +G+LG     ++  P+ +EAL DK++  I  G S +AAI
Sbjct: 332 EGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 381



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 162/356 (45%), Gaps = 48/356 (13%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GD++IWG+  G G LG G   S          FVP          ++ IA GG H+  +T
Sbjct: 119 GDLWIWGKGDG-GRLGFGQENS---------VFVPNLNPLFEEHSIRCIALGGLHSVALT 168

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            QG+VF+WG    G LGH V +    P+ +D   +  +  +A    HT A+T SG++Y W
Sbjct: 169 HQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMW 228

Query: 310 GGSNCN-------FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           G    +             G  +S  +P K+      + V+SVSCG + T  +T  GQL+
Sbjct: 229 GREEGDGRLGLGPGRGPNEGGGLS--VPSKVKALT--VPVASVSCGGFFTMALTKEGQLW 284

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
            +G  +   LG GD +    P  V SL+G+R  + ACG +H+ A+ E             
Sbjct: 285 NWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE------------E 332

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           GK+ +WG G  G+LG      + VPT + AL +     ++ G S + A+T  G ++  G+
Sbjct: 333 GKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGN 392

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFVEE-----------IACGDYHVAVLTSRT 527
               QLG P     LP      +  NF+ E           I+ G  H   L SR+
Sbjct: 393 AKDFQLGVP----GLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSRS 444



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 167/355 (47%), Gaps = 35/355 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+CG  H+ L T  G+++ WG+  GGRLG G ++ V  P L    +  ++  +A G  H+
Sbjct: 106 ISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 164

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+T  GD++TWG     FG LGH       +P++++   +   +S+++    HTA +T 
Sbjct: 165 VALTHQGDVFTWG--YGGFGALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITE 221

Query: 358 AGQLFTFG-------DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +G+L+ +G        G     G  +   +S P +V +L  +     +CG + T A+ + 
Sbjct: 222 SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK- 279

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                       G+L+ WG      LG GD      P  V +L      Q++CG   ++A
Sbjct: 280 -----------EGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLA 328

Query: 471 LTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           LT  G V + G   +GQLG     N K+PT +E    K  V  IA G    A +T   E+
Sbjct: 329 LTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIV-FIASGGSSSAAITDGGEL 387

Query: 530 YTWGKGANGRLG-HGDTDDRNFPSLVEALKDK------QVKSIVCGTSFTAAICL 577
           + WG   + +LG  G  + +  P  V  L ++      +V SI  G S   A+CL
Sbjct: 388 WMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASH--ALCL 440


>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 174/380 (45%), Gaps = 40/380 (10%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G  +  + P+ V    + +V  +AC    +A + K G++++WG    G LG+G   +++ 
Sbjct: 46  GNSISQYSPQLVP---IQNVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINI 102

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P L++ LK+++ + VACG +H  A+T  G +YTWG  N + G LGH  +    LP +   
Sbjct: 103 PTLVECLKHLDFKYVACGNYHMAAITRDGQLYTWG--NQDHGKLGHSFDNLAKLPSREKY 160

Query: 336 PLE--------------GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
             +                 V  VS G   T +++  G +++ G    G+LG+  + +  
Sbjct: 161 EYQKNLGSAKLPELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNKKGILGYETKNA-- 218

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC-SSGKLFTWGDGDRGRLGHGD 440
              E  S K +  ++          ++++  G+  S    S G +F WG    G+LG   
Sbjct: 219 ---EELSFKQISNLK---------NIIQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPS 266

Query: 441 KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTR 500
                 P  +  L  P   Q SCG     AL+  G +YT G    GQLG P     +PT 
Sbjct: 267 PSVIQTPQQIKGL--PKIKQFSCGEQFIGALSADGVLYTWGFGGDGQLGTPSKQ-DIPTP 323

Query: 501 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG-DTDDRNFPSLVEALKD 559
            +     N +++++CG  HV ++ S  ++Y  G+G  G+LG G +T+  N       L  
Sbjct: 324 HKISFDHN-IDKVSCGQAHVGII-SNNKLYMHGRGKEGQLGRGSETESPNSSRYSPLLVL 381

Query: 560 KQVKSIVCGTSFTAAICLHK 579
           + V  I CG S + AI   K
Sbjct: 382 ENVLKIACGGSHSFAIVNQK 401



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 169/340 (49%), Gaps = 18/340 (5%)

Query: 245 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
           ++ V  Q ++++WG    G+LG G       P+L+      NV  VAC    + A+  SG
Sbjct: 23  SSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPIQ---NVLFVACKSSVSAAIDKSG 79

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            +YTWG S   FGLLG+G   ++ +P  L   L+ +    V+CG +H A +T  GQL+T+
Sbjct: 80  KLYTWGRS--KFGLLGNGQVENINIP-TLVECLKHLDFKYVACGNYHMAAITRDGQLYTW 136

Query: 365 GDGTFGVLGHG-DRISVSTPRE-VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS- 421
           G+   G LGH  D ++    RE  +  K L + +    V     V +V +G   +   S 
Sbjct: 137 GNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVSLGDQFTLILSD 196

Query: 422 SGKLFTWGDGDRGRLGHGDKEA-RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            G +++ G   +G LG+  K A  L    ++ L   N  Q+  G   +VAL + G+++  
Sbjct: 197 DGNVYSVGLNKKGILGYETKNAEELSFKQISNL--KNIIQIDSGTDFSVALDSDGNMFAW 254

Query: 481 GSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           GS  +GQLG P  +  + P +++G L K  +++ +CG+  +  L++   +YTWG G +G+
Sbjct: 255 GSNYFGQLGTPSPSVIQTPQQIKG-LPK--IKQFSCGEQFIGALSADGVLYTWGFGGDGQ 311

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK 579
           LG     D   P  +    D  +  + CG +    I  +K
Sbjct: 312 LGTPSKQDIPTPHKISF--DHNIDKVSCGQAHVGIISNNK 349



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 163/357 (45%), Gaps = 49/357 (13%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHA 245
           D  G ++ WG  +  G+LG G          ++++  +P  VE    LD + +ACG  H 
Sbjct: 76  DKSGKLYTWGR-SKFGLLGNG----------QVENINIPTLVECLKHLDFKYVACGNYHM 124

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHP--------------KLIDALK-NINVELV 290
           A +T+ G++++WG +  G+LGH  D+    P              KL + +K N  V  V
Sbjct: 125 AAITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQV 184

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
           + G+  T  ++  G++Y+ G +    G+LG+  + +  L  K    L+  ++  +  G  
Sbjct: 185 SLGDQFTLILSDDGNVYSVGLNKK--GILGYETKNAEELSFKQISNLK--NIIQIDSGTD 240

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
            +  + S G +F +G   FG LG      + TP+++  L  ++  + +CG        E 
Sbjct: 241 FSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKGLPKIK--QFSCG--------EQ 290

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
            +G+ S    + G L+TWG G  G+LG   K+   +PT      + N  +VSCG +  V 
Sbjct: 291 FIGALS----ADGVLYTWGFGGDGQLGTPSKQD--IPTPHKISFDHNIDKVSCGQA-HVG 343

Query: 471 LTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           + +   +Y  G    GQLG   +      +R    L    V +IACG  H   + ++
Sbjct: 344 IISNNKLYMHGRGKEGQLGRGSETESPNSSRYSPLLVLENVLKIACGGSHSFAIVNQ 400



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 9/147 (6%)

Query: 411 MVGSS----SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
            +GSS    SS   S  +L+ WG  + G+LG G+  ++  P  V      N   V+C  S
Sbjct: 14  FIGSSITFTSSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPI---QNVLFVACKSS 70

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
           ++ A+  +G +YT G   +G LG+ +  N  +PT VE     +F + +ACG+YH+A +T 
Sbjct: 71  VSAAIDKSGKLYTWGRSKFGLLGNGQVENINIPTLVECLKHLDF-KYVACGNYHMAAITR 129

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPS 552
             ++YTWG   +G+LGH   +    PS
Sbjct: 130 DGQLYTWGNQDHGKLGHSFDNLAKLPS 156


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 66/367 (17%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK---NINVELVACGE 294
           I+ G  H +++T +G +++WG+ L G+LGHG     S P+L++  +   ++ V  VA G 
Sbjct: 166 ISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGG 225

Query: 295 HHTCAVTLSGDMYTWGGSN-CNFGL------------------------------LGHGN 323
            HT A+T+ G++Y++GG++ C  GL                              +   N
Sbjct: 226 KHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSN 285

Query: 324 EMSLWLPKKLNGPLEGI-HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 382
             S    K+       I  +  +SC    +A ++  G L+T+G G  G LGHGD +  ST
Sbjct: 286 STSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQST 345

Query: 383 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-K 441
           P++V SL G   V  + G  H+ A+ +             G++F+WG G+ G+LGHG   
Sbjct: 346 PKQVMSLHGHTIVDMSLGGGHSMALTK------------RGEVFSWGRGENGQLGHGTFT 393

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-----DPKANGK 496
             ++ P  + A        +S G   ++A+ T G ++  G   YG LG     D   +  
Sbjct: 394 SQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGDIN 453

Query: 497 LPTRVEGKLT------------KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
            P  ++                + F+  ++ G  H    T   ++Y+WG G+  RLG  +
Sbjct: 454 SPVLIKSLNNSNGSNNSNSSAGERFIN-VSSGFQHNVAQTENGDLYSWGCGSGNRLGLAN 512

Query: 545 TDDRNFP 551
            +++  P
Sbjct: 513 EENQLIP 519



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 37/254 (14%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++C    +A ++K G +++WG    GRLGHG     S PK + +L    +  ++ G  H+
Sbjct: 308 LSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGGGHS 367

Query: 298 CAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A+T  G++++WG G N   G LGHG   S  +  K     +   +  +S G +H+  + 
Sbjct: 368 MALTKRGEVFSWGRGEN---GQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAID 424

Query: 357 SAGQLFTFGDGTFGVLGHGDRI----SVSTPREVDSLK------------GLRTVRAACG 400
           + G +F +G G +GVLG    +     +++P  + SL             G R +  + G
Sbjct: 425 TNGSMFAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSG 484

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV---AALVEPN 457
             H  A  E            +G L++WG G   RLG  ++E +L+P  +   +   +P 
Sbjct: 485 FQHNVAQTE------------NGDLYSWGCGSGNRLGLANEENQLIPKKLNDRSNNSKPA 532

Query: 458 FCQVSCGHSLTVAL 471
           F   SCG  +T+ +
Sbjct: 533 F--FSCGEIITIIV 544



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 152/331 (45%), Gaps = 61/331 (18%)

Query: 189 LGDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFV---PKAVESAVVLDVQNIACGGRH 244
           LG ++ WG   GD G LG G            DS +   PK V S     + +++ GG H
Sbjct: 321 LGYLYTWGR--GDNGRLGHG------------DSLMQSTPKQVMSLHGHTIVDMSLGGGH 366

Query: 245 AALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
           +  +TK+GEVFSWG    G+LGHG   S    PK I A +N  +++++ G +H+ A+  +
Sbjct: 367 SMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTN 426

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL-----------------EGIHVSSVS 346
           G M+ WG    ++G+LG  +  SL     +N P+                  G    +VS
Sbjct: 427 GSMFAWGRG--DYGVLGVSS--SLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVS 482

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV-DSLKGLRTVRAACGVWHTA 405
            G  H    T  G L+++G G+   LG  +  +   P+++ D     +    +CG   T 
Sbjct: 483 SGFQHNVAQTENGDLYSWGCGSGNRLGLANEENQLIPKKLNDRSNNSKPAFFSCGEIITI 542

Query: 406 AVVEVMVGSSSSS-----NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
            V + ++ +S +S     N SSG   + GD         D +  ++P   ++    N  +
Sbjct: 543 IVEKKLIENSDTSTSTPINTSSGITKSTGD---------DSKELVLPKEYSS---ENLNE 590

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
           +  G  L+ +LT +G+ ++  SP+   + +P
Sbjct: 591 I--GKKLSGSLTISGNAFS-SSPLQPLVLNP 618



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 94/228 (41%), Gaps = 51/228 (22%)

Query: 386 VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
           +D LK  + V  + G  HT+ + +             G L+TWGDG  G+LGHG  E+  
Sbjct: 156 IDFLKE-KVVFISTGAIHTSIITD------------KGHLYTWGDGLLGKLGHGTLESYS 202

Query: 446 VPTCVAAL-VEPNFCQVSC--GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL---PT 499
            P  V     +P+   VS   G   TVALT  G+VY+ G     QLG    +      P 
Sbjct: 203 EPRLVEFFETKPSLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQ 262

Query: 500 RV-----------------------------EGKLTKNFVEEI---ACGDYHVAVLTSRT 527
            V                             + + + N ++ I   +C     A ++   
Sbjct: 263 LVTFQSPQSLSNSNSSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLG 322

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +YTWG+G NGRLGHGD+  ++ P  V +L    +  +  G   + A+
Sbjct: 323 YLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGGGHSMAL 370


>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
           garnettii]
          Length = 816

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 166/341 (48%), Gaps = 33/341 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H+A+VT   +++ +G    G+LG G  + V+ P  I ALK   V+  ACG  HT
Sbjct: 40  LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVVT 356
              T  G++Y  GG+N     LG  +E   +    L       H +  +S G   +A +T
Sbjct: 100 IISTEGGNVYATGGNNEGQLGLGDTDERDTF---HLISFFTSQHKIKQLSAGSNTSAALT 156

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             GQLF +GD + G +G  D  +V  P +V   K +  +  +CG +H+A V         
Sbjct: 157 EDGQLFMWGDNSEGQIGLKDVTNVCVPHQVTIGKPISWI--SCGYYHSAFVT-------- 206

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                 G+L+T+G+ + G+LG   +      +P  V+++ +    QV+CG   T+ LT  
Sbjct: 207 ----IDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPD-KVIQVACGGGHTLVLTEE 261

Query: 475 GHVYTMGSPVYGQLG-----DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
             VY  G   +GQLG        +  K+   V+G+     +  I+CG+ H A++T    +
Sbjct: 262 S-VYAFGLGQFGQLGLGTFIFETSEPKVLEYVKGEK----IISISCGENHTAMITDTGGI 316

Query: 530 YTWGKGANGRLGHG--DTDDRNFPSLVEALKDKQVKSIVCG 568
           YT+G G +G+LG G  +  +R FP+         V+ + CG
Sbjct: 317 YTFGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACG 357



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 147/317 (46%), Gaps = 43/317 (13%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  +++     V+  ACG  H  + T+ G V++ G    G+LG G   +     LI    
Sbjct: 78  PTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGGNNEGQLGLGDTDERDTFHLISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G ++ WG  + + G +G  +  ++ +P ++     G  +
Sbjct: 138 SQHKIKQLSAGSNTSAALTEDGQLFMWG--DNSEGQIGLKDVTNVCVPHQVTI---GKPI 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT  G+L+TFG+   G LG   ++  +   P+ V S+   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTIDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPD-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             HT  + E  V             + +G G  G+LG G        T +    EP   +
Sbjct: 252 GGHTLVLTEESV-------------YAFGLGQFGQLGLG--------TFIFETSEPKVLE 290

Query: 461 ---------VSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKN 508
                    +SCG + T  +T TG +YT G   +G+LG   +   N   PT     L K 
Sbjct: 291 YVKGEKIISISCGENHTAMITDTGGIYTFGDGRHGKLGLGLENFTNRFFPTPCSVFL-KF 349

Query: 509 FVEEIACGDYHVAVLTS 525
            V+ +ACG  H+ V  +
Sbjct: 350 MVQLVACGGCHMLVFAT 366



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H A++T   ++Y +G    G+LG G     N P+ ++ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHT 99



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)

Query: 212 GSYAGVKMDSFV-----PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 266
           G +  + + +F+     PK +E      + +I+CG  H A++T  G ++++G+   G+LG
Sbjct: 269 GQFGQLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMITDTGGIYTFGDGRHGKLG 328

Query: 267 HGVDSDVSH--PKLIDALKNINVELVACGEHH 296
            G+++  +   P          V+LVACG  H
Sbjct: 329 LGLENFTNRFFPTPCSVFLKFMVQLVACGGCH 360


>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
           GTPase regulator, partial [Callithrix jacchus]
          Length = 817

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 168/340 (49%), Gaps = 29/340 (8%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +++CG  H+A+VT   +++ +G    G+LG G  S VS P  + ALK   V+L ACG +H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G++Y  GG+  + G LG G+        +++       +  +S G   +A +T
Sbjct: 99  TLVSTEGGNVYATGGN--DEGQLGLGDTEERTTFHRVSFFTSQHKIKQLSAGSNTSAALT 156

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G +G  + ++   P +V   K +  +  +CG +H+A V         
Sbjct: 157 EDGRLFMWGDNSEGQIGLPNILNACVPHQVTIGKPVSWI--SCGYYHSAFVT-------- 206

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
               + G+L+ +G+ + G+LG  ++      +P  V  + E    QV+CG   +V LT  
Sbjct: 207 ----TDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPE-KVIQVACGGEHSVVLTED 261

Query: 475 GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVLTSRTEVY 530
             VYT G   +GQLG       L    E K+ +N     +  I+CG+ H A+LT    +Y
Sbjct: 262 A-VYTFGLGQFGQLG---LGTLLFETSEPKVVENIGNKTISYISCGENHAALLTDNGLMY 317

Query: 531 TWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           T+G G +G+LG G  +  N   P+L        VK + CG
Sbjct: 318 TFGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACG 357



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 143/312 (45%), Gaps = 33/312 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDAL 282
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G  +   +  ++    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFT 137

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
               ++ ++ G + + A+T  G ++ WG +  + G +G  N ++  +P ++     G  V
Sbjct: 138 SQHKIKQLSAGSNTSAALTEDGRLFMWGDN--SEGQIGLPNILNACVPHQVTI---GKPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+ FG+   G LG  + +  +   P+ V  +   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE----P 456
             H+  + E  V             +T+G G  G+LG G     L  T    +VE     
Sbjct: 252 GEHSVVLTEDAV-------------YTFGLGQFGQLGLG---TLLFETSEPKVVENIGNK 295

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEI 513
               +SCG +    LT  G +YT G   +G+LG   +   N   PT       K  V+ +
Sbjct: 296 TISYISCGENHAALLTDNGLMYTFGDGRHGKLGLGLENFTNQFTPTLC-CNFLKFVVKLV 354

Query: 514 ACGDYHVAVLTS 525
           ACG  H+ V  +
Sbjct: 355 ACGGCHMVVFAA 366



 Score = 46.2 bits (108), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)

Query: 496 KLPTRVEGKL-TKNFVE-EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL 553
           K+   + GK   KN V   ++CGD H AV+T   ++Y +G    G+LG G     + P+ 
Sbjct: 21  KIAENIPGKFWFKNDVAVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTC 80

Query: 554 VEALKDKQVKSIVCGTSFT 572
           V+ALK ++VK   CG + T
Sbjct: 81  VKALKPEKVKLAACGRNHT 99


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 144/292 (49%), Gaps = 17/292 (5%)

Query: 235 VQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           V  ++C  G  H  +VT  G+V+S G    G+LG G         L+++LK++ V   +C
Sbjct: 136 VVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASC 195

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
             HH+  V+  G  +++G ++C  G LG G   +  LP ++  P   + V   +CG +HT
Sbjct: 196 SYHHSVVVSSDGSAFSFGLNDC--GQLGIGTRPNQLLPHRVELPSPHL-VRLAACGQYHT 252

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +T  G +F+ G    G LG G R S + P  + +L+       ACG  HT  V+E   
Sbjct: 253 IFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLE--- 309

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                     GKLFT+G   +G+LG G  ++   P  V  L      ++SCG   T  L+
Sbjct: 310 ---------DGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLS 360

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
            +G +++ G   +GQLG   +  +L   +   +TK  + EIACG +H+  ++
Sbjct: 361 ESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 172/358 (48%), Gaps = 38/358 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-----------DSDVSHPKLIDALK 283
           +  +A G   +  +T++G+V+  G    G+L                SD+   +L++ L 
Sbjct: 75  IVKVAAGSETSYFLTEEGKVYCCGLNSTGQLARETHQGSANRSKEYSSDI---ELMEGLP 131

Query: 284 -NINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEG 339
            +  V  V+C  G  H   VT +G +Y+ G +N   G LG G+ +MS  L   L   L+ 
Sbjct: 132 PDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNN--HGQLGLGSTKMSPSL--LLVESLKH 187

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR-AA 398
           + V S SC   H+ VV+S G  F+FG    G LG G R +   P  V+ L     VR AA
Sbjct: 188 VRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVE-LPSPHLVRLAA 246

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG +HT  + E             G +F+ G    G+LG G + +  VPT +AAL E   
Sbjct: 247 CGQYHTIFLTE------------EGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPA 294

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGD 517
             ++CG+S T  +   G ++T G    GQLG    +    P +VE  L    V +I+CG 
Sbjct: 295 SMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVE-TLRNVKVVKISCGT 353

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +   VL+   E++++G   +G+LG GD+ DR  P LV ++  K +  I CG     AI
Sbjct: 354 HFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAI 411



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 158/333 (47%), Gaps = 26/333 (7%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           VF+ G+   G LGH    +     L+ +L+   +  VA G   +  +T  G +Y  G  N
Sbjct: 42  VFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCG-LN 100

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIH-------VSSVSC--GPWHTAVVTSAGQLFTF 364
               L    ++ S    K+ +  +E +        V  VSC  G  H  VVTSAGQ+++ 
Sbjct: 101 STGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSC 160

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G    G LG G      +   V+SLK +R + A+C   H+  V             S G 
Sbjct: 161 GCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVVS------------SDGS 208

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS-CGHSLTVALTTTGHVYTMGSP 483
            F++G  D G+LG G +  +L+P  V  L  P+  +++ CG   T+ LT  G V++ G  
Sbjct: 209 AFSFGLNDCGQLGIGTRPNQLLPHRVE-LPSPHLVRLAACGQYHTIFLTEEGMVFSCGKN 267

Query: 484 VYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
           + GQLG   +++  +PT +   L +     IACG  H  V+    +++T+G    G+LG 
Sbjct: 268 LNGQLGLGSRSSTNVPTLI-AALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGL 326

Query: 543 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G TD  + P  VE L++ +V  I CGT FT  +
Sbjct: 327 GHTDSVSSPMQVETLRNVKVVKISCGTHFTCVL 359



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 3/192 (1%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G + +  +P  VE      V+  ACG  H   +T++G VFS G+ L G+LG G  S  + 
Sbjct: 223 GTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNV 282

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P LI AL+     ++ACG  HTC V   G ++T+G +  + G LG G+  S+  P ++  
Sbjct: 283 PTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYN--HQGQLGLGHTDSVSSPMQVE- 339

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            L  + V  +SCG   T V++ +G+L++FG    G LG GD      P  V S+      
Sbjct: 340 TLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLS 399

Query: 396 RAACGVWHTAAV 407
             ACG  H  A+
Sbjct: 400 EIACGFHHLVAI 411



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  VE+   + V  I+CG     ++++ GE++S+G    G+LG G  +D   P L+ ++ 
Sbjct: 335 PMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMT 394

Query: 284 NINVELVACGEHHTCAVT 301
             N+  +ACG HH  A++
Sbjct: 395 KKNLSEIACGFHHLVAIS 412


>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 166/348 (47%), Gaps = 30/348 (8%)

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           G+LG G   +   A  +++ F P A        V  ++    HAA V + GEVF+ G+  
Sbjct: 140 GVLGHGPETTQCVAFSRIN-FPPLA-------HVAQVSASHNHAAFVMQSGEVFTCGDNS 191

Query: 262 GGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 320
               GHG     +  P+L++ALK +  + VA G   T  +T+ G +YT G +    G LG
Sbjct: 192 SFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTN--THGQLG 249

Query: 321 HGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           HG+ +    PK +   LEG+  V  ++ GP +   VT  G + +FG G+   LGHG++ +
Sbjct: 250 HGDTVDRRTPKIVE-LLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHN 308

Query: 380 VSTPREVDSL--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG 437
              PR + S   K +  VR + G  H  A+             SSG ++TWG G  G LG
Sbjct: 309 ELRPRAIQSFRRKTIHVVRISAGDEHVVALD------------SSGFVYTWGKGYCGALG 356

Query: 438 HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---AN 494
           HGD+  +  P  +++L      QV      T  L  TG VY  G   +G LG P    ++
Sbjct: 357 HGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASD 416

Query: 495 GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +   +   L  +++ +I+ G YH   + ++ +++ +G     +LGH
Sbjct: 417 KVMRPWILDSLRGHYISQISTGLYHTVAVXNKGQIFGFGDNERAQLGH 464



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 137/275 (49%), Gaps = 23/275 (8%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP-KKLNGPLEGIHVSSVSCG 348
           +  G +HT  +  S  +Y+ G S C  G+LGHG E +  +   ++N P    HV+ VS  
Sbjct: 116 ITTGRYHTLLIKDS-SVYSCGSSLC--GVLGHGPETTQCVAFSRINFPPLA-HVAQVSAS 171

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAV 407
             H A V  +G++FT GD +    GHGD +  +  PR V++LKG+   + A G+  T  +
Sbjct: 172 HNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFL 231

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGH 465
                          G ++T G    G+LGHGD   R  P  V  L  V P   Q++ G 
Sbjct: 232 T------------MKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGP-VVQIAAGP 278

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNF-VEEIACGDYHVAVL 523
           S  +A+T  G V++ GS     LG  + + +L P  ++    K   V  I+ GD HV  L
Sbjct: 279 SYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVAL 338

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
            S   VYTWGKG  G LGHGD  D+  P ++ +LK
Sbjct: 339 DSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLK 373



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 150/347 (43%), Gaps = 33/347 (9%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVD-------SDVSHPKLIDALKNINVELVACGE 294
           GR+  L+ K   V+S G  L G LGHG +       S ++ P L       +V  V+   
Sbjct: 119 GRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLA------HVAQVSASH 172

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
           +H   V  SG+++T G  N +F   GHG+ +      +L   L+G+    V+ G   T  
Sbjct: 173 NHAAFVMQSGEVFTCG-DNSSF-CCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVF 230

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           +T  G ++T G  T G LGHGD +   TP+ V+ L+G+              VV++  G 
Sbjct: 231 LTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGV------------GPVVQIAAGP 278

Query: 415 SSSSNCSS-GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF--CQVSCGHSLTVAL 471
           S +   +  G + ++G G    LGHG++   L P  + +         ++S G    VAL
Sbjct: 279 SYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVAL 338

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
            ++G VYT G    G LG      K    +   L  +   ++        VL     VY 
Sbjct: 339 DSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398

Query: 532 WGKGANGRLG---HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +G    G LG    G +D    P ++++L+   +  I  G   T A+
Sbjct: 399 FGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAV 445



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 135/286 (47%), Gaps = 20/286 (6%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P+ VE+   +  + +A G      +T +G V++ G    G+LGHG   D   PK+++ 
Sbjct: 205 FRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVEL 264

Query: 282 LKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEG 339
           L+ +  V  +A G  +  AVT  G ++++G S  NF  LGHG + +   P+ +     + 
Sbjct: 265 LEGVGPVVQIAAGPSYAMAVTDDGTVHSFG-SGSNF-CLGHGEQHNELRPRAIQSFRRKT 322

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           IHV  +S G  H   + S+G ++T+G G  G LGHGD I  +TP  + SLK    V+   
Sbjct: 323 IHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCA 382

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR---LVPTCVAALVEP 456
               T  +V+            +G ++ +G    G LG  D+ A    + P  + +L   
Sbjct: 383 RKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGH 430

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRV 501
              Q+S G   TVA+   G ++  G     QLG     G  +PT +
Sbjct: 431 YISQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 115/243 (47%), Gaps = 21/243 (8%)

Query: 216 GVKMDSFVPKAVESAV-VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
           G  +D   PK VE    V  V  IA G  +A  VT  G V S+G      LGHG   +  
Sbjct: 251 GDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNEL 310

Query: 275 HPKLIDAL--KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
            P+ I +   K I+V  ++ G+ H  A+  SG +YTWG   C  G LGHG+E+    P+ 
Sbjct: 311 RPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYC--GALGHGDEIDKTTPEI 368

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS---VSTPREVDSL 389
           L+     + V  V      T V+   G ++ FG   FG LG  DR +   V  P  +DSL
Sbjct: 369 LSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSL 427

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
           +G    + + G++HT AV             + G++F +GD +R +LGH       VPT 
Sbjct: 428 RGHYISQISTGLYHTVAVX------------NKGQIFGFGDNERAQLGHDTLRGCPVPTE 475

Query: 450 VAA 452
           + A
Sbjct: 476 IFA 478



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 13/134 (9%)

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF-----VEEIA 514
           Q++ G   T+ L     VY+ GS + G LG    +G   T+       NF     V +++
Sbjct: 115 QITTGRYHTL-LIKDSSVYSCGSSLCGVLG----HGPETTQCVAFSRINFPPLAHVAQVS 169

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTA 573
               H A +    EV+T G  ++   GHGDT    F P LVEALK    K +  G SFT 
Sbjct: 170 ASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTV 229

Query: 574 AICL--HKWVSGVD 585
            + +  H +  G +
Sbjct: 230 FLTMKGHVYTCGTN 243


>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
           musculus]
 gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 746

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 164/339 (48%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  + +  P  I ALK   V+L ACG +HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T +G +Y  GG+N     LG  ++   +       P + I    +S G   +A +T 
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 195

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  D+ +V  P EV   K +  +  +CG +H+A V          
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 244

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                G+L+T+G+ + G+LG  ++       P  V  + E    QV+CG   TV LT   
Sbjct: 245 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK- 299

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VY  G   +GQLG       L    E K+ +   ++    I+CG+ H A++T    +YT
Sbjct: 300 VVYAFGLGQFGQLG---LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYT 356

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 157/335 (46%), Gaps = 35/335 (10%)

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           +LV   G VF++G+    +    + S           KN     ++CG+ HT  VT +  
Sbjct: 44  SLVPDTGAVFTFGKT---KFAENIPSKF-------WFKNDIPICLSCGDEHTAIVTGNNK 93

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG  HT V T  G ++  G
Sbjct: 94  LYMFGSNN--WGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGRNHTLVSTDTGGVYAAG 150

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGSSSSSNCSSGK 424
               G LG GD     T  ++       T++  + G   +AA+ E             GK
Sbjct: 151 GNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE------------DGK 198

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           LF WGD   G++G  DK    +P  V   V      +SCG+  +  +T  G +YT G P 
Sbjct: 199 LFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSAFVTMDGELYTFGEPE 256

Query: 485 YGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            G+LG P     N + P RV G   +  V ++ACG  H  VLT +  VY +G G  G+LG
Sbjct: 257 NGKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTEKV-VYAFGLGQFGQLG 313

Query: 542 HGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G    + + P ++E +KD+++  I CG + TA +
Sbjct: 314 LGTFLFETSEPKIIERIKDQKICHISCGENHTALM 348



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 152/322 (47%), Gaps = 37/322 (11%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDV 273
           G K     P  +++     V+  ACG  H  + T  G V++ G    G+LG G   D D 
Sbjct: 108 GSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT 167

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            H +++       ++ ++ G + + A+T  G ++ WG ++   G +G  ++ ++ +P ++
Sbjct: 168 FH-QIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEV 224

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKG 391
                G  +S +SCG +H+A VT  G+L+TFG+   G LG  + + ++  +P+ V  +  
Sbjct: 225 T---VGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE 281

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCV 450
            R ++ ACG  HT  + E +V             + +G G  G+LG G        P  +
Sbjct: 282 -RVIQVACGGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKII 327

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTK 507
             + +   C +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L  
Sbjct: 328 ERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPT-----LCS 382

Query: 508 NF----VEEIACGDYHVAVLTS 525
           NF    V+ IACG  H+ V  +
Sbjct: 383 NFLRFAVQLIACGGCHMLVFAT 404



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 36/264 (13%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTGHLKGLSGDTFR--VSLSSAVSS 176
           P KV L   +ACG  ++L S          G ++G+ G       DTF   V  + A + 
Sbjct: 124 PEKVKL---AACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI 180

Query: 177 SSQGSGHDDGDSL---GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
               +G +   +L   G +F+WG+             S    G++  S V    E  V  
Sbjct: 181 KQLSAGANTSAALTEDGKLFMWGD------------NSEGQIGLEDKSNVCIPHEVTVGK 228

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVA 291
            +  I+CG  H+A VT  GE++++GE   G+LG   +  ++H  P+ +  +    ++ VA
Sbjct: 229 PISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VA 287

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           CG  HT  +T    +Y +G     FG LG G  +      K+   ++   +  +SCG  H
Sbjct: 288 CGGGHTVVLT-EKVVYAFGLG--QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENH 344

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG 375
           TA++T  G L+TFGDG  G LG G
Sbjct: 345 TALMTELGLLYTFGDGRHGKLGLG 368


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 159/337 (47%), Gaps = 20/337 (5%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVAC 292
           D++ +  G    A++T +G V + G    G+ G G  D  V   + + AL++  V+ +A 
Sbjct: 362 DIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAA 421

Query: 293 --GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
             G  H  A+T +G  Y+WG ++   G LGH N  +     KL   L+   +   S    
Sbjct: 422 SNGCEHMIALTDTGLAYSWGYND--RGQLGHENLATKIHVPKLIESLKDKKLGFASVSYH 479

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           H+AV+T AG+L+TFG    G LG       STP+ V SL+       ACG++HT      
Sbjct: 480 HSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICT-- 537

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                     ++G+LFT G  D G+LG        +PT V AL       V+CG+  +V 
Sbjct: 538 ----------AAGELFTCGKNDYGQLGLAHNRQIKLPTLV-ALPNEMVSFVACGYYHSVV 586

Query: 471 LTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           ++T G  ++ G   YGQLG   K +  +P  V        V    CG YH  +L+ + +V
Sbjct: 587 VSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRA-TCGCYHTVLLSEQGQV 645

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
           Y +G+   G+LG+  + D   P  ++   +K  +  V
Sbjct: 646 YVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCV 682



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 122/235 (51%), Gaps = 16/235 (6%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           VPK +ES     +   +    H+A++T  GE++++G    G+LG       S P+L+ +L
Sbjct: 459 VPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSL 518

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +   V +VACG +HT   T +G+++T G ++  +G LG  +   + LP  +  P E   V
Sbjct: 519 EATEVSMVACGLYHTIICTAAGELFTCGKND--YGQLGLAHNRQIKLPTLVALPNE--MV 574

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
           S V+CG +H+ VV++ G+ F+FG   +G LG G ++  + P  V      R VRA CG +
Sbjct: 575 SFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCY 634

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           HT  + E             G+++ +G  ++G+LG+      L+P  +    E N
Sbjct: 635 HTVLLSE------------QGQVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKN 677



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 16/326 (4%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           GE++S G+   G LG G D +      +      ++  V  G      +T  G + T G 
Sbjct: 328 GELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGL 387

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           +       GH +E  + L        + +   + S G  H   +T  G  +++G    G 
Sbjct: 388 NKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQ 447

Query: 372 LGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
           LGH +  + +  P+ ++SLK  +   A+    H+A + +            +G+L+T+G 
Sbjct: 448 LGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITD------------AGELYTFGM 495

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
            D G+LG    + +  P  V +L       V+CG   T+  T  G ++T G   YGQLG 
Sbjct: 496 NDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGL 555

Query: 491 P-KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
                 KLPT V   L    V  +ACG YH  V+++    +++G+   G+LG G    +N
Sbjct: 556 AHNRQIKLPTLV--ALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQN 613

Query: 550 FPSLVEALKDKQVKSIVCGTSFTAAI 575
            P++V    + ++    CG   T  +
Sbjct: 614 VPNVVALSSNTRMVRATCGCYHTVLL 639



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 19/225 (8%)

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
           ++G+L++ G  ++G LG GD I       V SL G   +R       T AV+        
Sbjct: 326 ASGELYSCGQNSYGELGTGDDIERHQLTSV-SLCGWDDIRQVVSGNETLAVL-------- 376

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
               + G + T G    G+ G G  + R++   P          F   S G    +ALT 
Sbjct: 377 ---TNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTD 433

Query: 474 TGHVYTMGSPVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
           TG  Y+ G    GQLG      K+  P  +E  L    +   +   +H AV+T   E+YT
Sbjct: 434 TGLAYSWGYNDRGQLGHENLATKIHVPKLIE-SLKDKKLGFASVSYHHSAVITDAGELYT 492

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
           +G    G+LG   T  ++ P LV++L+  +V  + CG   T  IC
Sbjct: 493 FGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHT-IIC 536


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 120/217 (55%), Gaps = 15/217 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACG 293
           +  I CG  H+  ++K GE+F+WG+ L G+LG G      + P++++ L  + +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           E H+ A+++SG++Y+WG +   FG LG G+  S   P  + G L+   V  V+CG  H+A
Sbjct: 200 EAHSMALSMSGNIYSWGKNE--FGQLGLGHTESKDYPSLIEG-LDNQKVEFVACGGSHSA 256

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++T  G LFTFG G  G LGH    +   P  V  L G R  + ACG WHT A V  +  
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDL-- 314

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
                    GK+F++G G  G+LG+G    +L+P  V
Sbjct: 315 ---------GKVFSFGSGKDGQLGNGGTRDQLMPLPV 342



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 28/290 (9%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK I   KN+ +  V  G  H   ++  G  + +   +     + H          +   
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----MKH---------LRFEN 133

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRT 394
            L+   +  ++CG +H+  ++  G+LF +G    G LG G +  S +TP+ V+ L G+  
Sbjct: 134 VLQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
            + + G  H+ A+              SG +++WG  + G+LG G  E++  P+ +  L 
Sbjct: 194 AQISAGEAHSMAL------------SMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLD 241

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA 514
                 V+CG S +  LT  G ++T G+  +GQLG      +L   +  +L    V +IA
Sbjct: 242 NQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIA 301

Query: 515 CGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
           CG +H +A ++   +V+++G G +G+LG+G T D+  P  V+    +++K
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 26/268 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           PK ++    + + ++  G  H  +++  G+ F +            +  + H +  + L+
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD-----------NYSMKHLRFENVLQ 136

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
              +  + CG++H+ A++  G+++ W G N + G LG G +       ++   L G+ ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAW-GQNLH-GQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            +S G  H+  ++ +G ++++G   FG LG G   S   P  ++ L   +    ACG   
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACG--- 251

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
                    GS S+     G LFT+G G  G+LGH   +  L P  VA LV     Q++C
Sbjct: 252 ---------GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIAC 302

Query: 464 GHSLTVA-LTTTGHVYTMGSPVYGQLGD 490
           G   T+A ++  G V++ GS   GQLG+
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKDGQLGN 330



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 26/239 (10%)

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           + + + SV  G  H  +++S G+ F +           D  S+   R  + L+  + ++ 
Sbjct: 95  KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFENVLQEKKIIQI 143

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEP 456
            CG +H+ A+               G+LF WG    G+LG G K  +   P  V  L   
Sbjct: 144 TCGDYHSLAL------------SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIAC 515
              Q+S G + ++AL+ +G++Y+ G   +GQLG      K  P+ +EG L    VE +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEG-LDNQKVEFVAC 250

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G  H A+LT    ++T+G G +G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 13/187 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+    G LG G     +          P+ VE    + +  I+ G  H+  ++
Sbjct: 157 GELFAWGQ-NLHGQLGVGRKFPSTTT--------PQIVEHLAGVPLAQISAGEAHSMALS 207

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G ++SWG+   G+LG G      +P LI+ L N  VE VACG  H+  +T  G ++T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G      G LGH +  +   P  L   L G  V+ ++CG WHT A V+  G++F+FG G 
Sbjct: 268 GAG--KHGQLGHNSTQNELRP-CLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 369 FGVLGHG 375
            G LG+G
Sbjct: 325 DGQLGNG 331



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 7/128 (5%)

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF-- 509
            L E    Q++CG   ++AL+  G ++  G  ++GQLG      K P+    ++ ++   
Sbjct: 134 VLQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAG 190

Query: 510 --VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             + +I+ G+ H   L+    +Y+WGK   G+LG G T+ +++PSL+E L +++V+ + C
Sbjct: 191 VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVAC 250

Query: 568 GTSFTAAI 575
           G S +A +
Sbjct: 251 GGSHSALL 258


>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 422

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 176/370 (47%), Gaps = 50/370 (13%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN----VELVAC 292
           ++ACGG H   +T+ G VF+ G    G+LG  + S  +H  ++D ++       V  ++ 
Sbjct: 74  SLACGGAHTLFLTQSGRVFATGLNDFGQLG--IGSSTTH--IVDPIEVTGFGEKVVQISA 129

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G HH+CAVT  G+++ WG ++     LG G    +  P+K++  L  + V  V+ G  H+
Sbjct: 130 GNHHSCAVTADGELFVWGKNSSGQLGLGKGVGKVVSTPRKVD-YLADVRVRMVALGSEHS 188

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISV---------STPREVDSLKGLRTVRAACGVWH 403
             VT  G+  ++G    G LGHG + S+          TPR + +L G++  R A G+ H
Sbjct: 189 IAVTEGGEALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLH 248

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VS 462
           +A + E             G LF +G       G  +   R  PT V    E  F + V+
Sbjct: 249 SACIDE------------KGTLFIFGQKTEKVFGRSNDAPR--PTVVE---EIQFSEEVA 291

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
           CG   T ALT  G +Y+ GS   G LG       + P  +   L K  V +++CG  H A
Sbjct: 292 CGGYHTCALTDGGDLYSWGSNENGCLGLGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTA 351

Query: 522 VLTSRTEVYTWGKG------------ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V++   ++YTWG G            + G+LGHG+  D   P +VE  ++ +   + CG 
Sbjct: 352 VISGE-DIYTWGWGGANGTFFEEGQSSGGQLGHGNDVDYFEPMMVELGRNARAVHVSCGF 410

Query: 570 SFTAAICLHK 579
           + T AI  +K
Sbjct: 411 NHTGAIFEYK 420



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 150/342 (43%), Gaps = 50/342 (14%)

Query: 257 WGEELGGRLGHGVDSDVSHPK---LIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           WG    GRLG G      +P       A        +ACG  HT  +T SG ++  G ++
Sbjct: 39  WGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLACGGAHTLFLTQSGRVFATGLND 98

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLE----GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
             FG LG G+  +      +  P+E    G  V  +S G  H+  VT+ G+LF +G  + 
Sbjct: 99  --FGQLGIGSSTT-----HIVDPIEVTGFGEKVVQISAGNHHSCAVTADGELFVWGKNSS 151

Query: 370 GVLGHGDRIS--VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           G LG G  +   VSTPR+VD L  +R    A G  H+ AV E             G+  +
Sbjct: 152 GQLGLGKGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTE------------GGEALS 199

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ---------VSCGHSLTVALTTTGHVY 478
           WG    GRLGHG K + L    V++   P   +         ++ G   +  +   G ++
Sbjct: 200 WGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLF 259

Query: 479 TMGSP---VYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
             G     V+G+  D P+     PT VE      F EE+ACG YH   LT   ++Y+WG 
Sbjct: 260 IFGQKTEKVFGRSNDAPR-----PTVVE---EIQFSEEVACGGYHTCALTDGGDLYSWGS 311

Query: 535 GANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAAI 575
             NG LG G T     P ++ + L    V  + CG   TA I
Sbjct: 312 NENGCLGLGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVI 353



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 124/234 (52%), Gaps = 24/234 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDS--FVPKAVESAVVLDVQNIACGGRHAAL 247
           G+   WG   G G LG G H+S S  G  M S  + P+ +++   + ++ IA G  H+A 
Sbjct: 195 GEALSWG-AAGAGRLGHG-HKS-SILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSAC 251

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           + ++G +F +G++     G    +D   P +++ ++    E VACG +HTCA+T  GD+Y
Sbjct: 252 IDEKGTLFIFGQKTEKVFGR--SNDAPRPTVVEEIQF--SEEVACGGYHTCALTDGGDLY 307

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG-- 365
           +WG SN N G LG G    +  P+ L   L  + VS VSCG  HTAV+ S   ++T+G  
Sbjct: 308 SWG-SNEN-GCLGLGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVI-SGEDIYTWGWG 364

Query: 366 --DGTF--------GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             +GTF        G LGHG+ +    P  V+  +  R V  +CG  HT A+ E
Sbjct: 365 GANGTFFEEGQSSGGQLGHGNDVDYFEPMMVELGRNARAVHVSCGFNHTGAIFE 418


>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
            CCMP526]
          Length = 1021

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 200/434 (46%), Gaps = 52/434 (11%)

Query: 167  RVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKA 226
            RV  S+  S+ S  S H    S   VF WG+ T +G LG    +  +  G  ++   P+ 
Sbjct: 613  RVRQSTTFSTLSATSSHTIVPS-TRVFAWGQGT-EGQLGHSPIQKSALTGAYVE-LSPRE 669

Query: 227  VESAVVLDVQNI-----------ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
            +      D Q I           A G  ++A VT+ G++++WG+    +LGHG    V  
Sbjct: 670  LRLDTEQDQQKIEKHNPWGFVDLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDSKPVYR 729

Query: 276  PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG---GSNCNFGLLGHGNEMSLWLPKK 332
            P+ ++AL+++ +  VACG+ HT A+   G ++TWG         G LGHG+E     PK 
Sbjct: 730  PRQVEALQDVKIVKVACGDFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKV 789

Query: 333  LNGPLE-GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
            +   ++ G  V SV+CG  HT ++T  G++ T G+G +G LG+G       P  V+    
Sbjct: 790  VRSLVDYGCRVGSVACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFD- 848

Query: 392  LRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GKLFTWGDGD------RGRLGHGDKEAR 444
                           +VEV  G + +   +  GK+FTWG  +       G +        
Sbjct: 849  -----------EKTNIVEVAAGHAFNLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSME 897

Query: 445  LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV-EG 503
             VP  V AL       V+ GHS + A+T  G +Y  G  ++ +   P+       RV EG
Sbjct: 898  AVPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWGMKIHLE---PQV-----FRVGEG 949

Query: 504  KLTKNFVEEIACGDYHVAVLTSRT-EVYTWGKGANGRLGHGDTDDRNFPSLV-EALKDKQ 561
                + V ++ CG  H AV+T    +++T+GKG++  LGHG       P LV + L  + 
Sbjct: 950  ----DKVWQVGCGGSHTAVVTEDAHQLFTFGKGSSLCLGHGTRSYTPHPKLVADGLAGRG 1005

Query: 562  VKSIVCGTSFTAAI 575
            V  + CG    A I
Sbjct: 1006 VVKVACGHRHMAVI 1019



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 101/202 (50%), Gaps = 29/202 (14%)

Query: 220  DSFVPKAVESAVVLD----VQNIACGGRHAALVTKQGEVFSWG--EELGGRLGHGVDSDV 273
            D  VP+ VE   + D    +  +A G     ++T+ G++F+WG  E+    LG G+  DV
Sbjct: 837  DHGVPEPVE---LFDEKTNIVEVAAGHAFNLVLTQDGKIFTWGRNEQGQLGLGGGISMDV 893

Query: 274  ----SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
                + P L++AL++  V  VA G  H+ AVT  G++Y WG              M + L
Sbjct: 894  YSMEAVPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWG--------------MKIHL 939

Query: 330  PKKLNGPLEGIHVSSVSCGPWHTAVVTS-AGQLFTFGDGTFGVLGHGDRISVSTPREV-D 387
              ++    EG  V  V CG  HTAVVT  A QLFTFG G+   LGHG R     P+ V D
Sbjct: 940  EPQVFRVGEGDKVWQVGCGGSHTAVVTEDAHQLFTFGKGSSLCLGHGTRSYTPHPKLVAD 999

Query: 388  SLKGLRTVRAACGVWHTAAVVE 409
             L G   V+ ACG  H A + +
Sbjct: 1000 GLAGRGVVKVACGHRHMAVITD 1021



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)

Query: 217  VKMDSF----VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
            + MD +    VP  VE+     V ++A G  H+A VT++GE++ WG ++           
Sbjct: 889  ISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWGMKIH---------- 938

Query: 273  VSHPKLIDALKNINVELVACGEHHTCAVTLSG-DMYTWG--GSNCNFGLLGHGNEMSLWL 329
               P++    +   V  V CG  HT  VT     ++T+G   S C    LGHG       
Sbjct: 939  -LEPQVFRVGEGDKVWQVGCGGSHTAVVTEDAHQLFTFGKGSSLC----LGHGTRSYTPH 993

Query: 330  PKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            PK +   L G  V  V+CG  H AV+T
Sbjct: 994  PKLVADGLAGRGVVKVACGHRHMAVIT 1020


>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Ornithorhynchus anatinus]
          Length = 806

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 25/337 (7%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A VT   +++  G    G+LG G  + V+ P  + ALK   V+  ACG +HT
Sbjct: 126 LSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHT 185

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G++Y  GG++   G LG G+        +++       +  +S G   +A +T 
Sbjct: 186 LVCTEGGNVYAAGGNSD--GQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTE 243

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+L+ +GD + G +G     +V  P  V  + G      +CG +H+A V          
Sbjct: 244 DGELYMWGDNSEGQIGLASESNVCVPCRV--VIGKPVSWVSCGYYHSALVT--------- 292

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEAR--LVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
              + G+L+T+G+ + G+LG   ++ +   +P  V   +     QV+CG   TVALT   
Sbjct: 293 ---TDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPG-ISGKVNQVACGGGHTVALTEED 348

Query: 476 HVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
            VYT G   +GQLG         +P  VE  L K  +  +ACG+ H A+++    +YT+G
Sbjct: 349 -VYTFGLGEFGQLGLGTCIFETSVPKVVE-HLRKQKIHYVACGENHTALISDTGLMYTFG 406

Query: 534 KGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
            G +G+LG G+ +  N   P+L        V  + CG
Sbjct: 407 DGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACG 443



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 145/298 (48%), Gaps = 23/298 (7%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L+N  +  ++CG+ HT  VT +  +Y  G +  N+G LG G++ ++  P  +   L+   
Sbjct: 118 LRNDTLAQLSCGDEHTAFVTGNSKLYMLGSN--NWGQLGLGSKTTVNKPTCVKA-LKPEK 174

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V   +CG  HT V T  G ++  G  + G LG GD    +T  ++        ++     
Sbjct: 175 VKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAG 234

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            +T+A +              G+L+ WGD   G++G   +    VP C   + +P    V
Sbjct: 235 SNTSAAL-----------TEDGELYMWGDNSEGQIGLASESNVCVP-CRVVIGKP-VSWV 281

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDY 518
           SCG+  +  +TT G +YT G P  G+LG   +   N ++P  V G   K  V ++ACG  
Sbjct: 282 SCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPGISGK--VNQVACGGG 339

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H   LT   +VYT+G G  G+LG G    + + P +VE L+ +++  + CG + TA I
Sbjct: 340 HTVALTEE-DVYTFGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALI 396



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 152/315 (48%), Gaps = 43/315 (13%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDAL 282
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G  +   +  ++    
Sbjct: 164 PTCVKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFT 223

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
               ++ ++ G + + A+T  G++Y WG +  + G +G  +E ++ +P ++   + G  V
Sbjct: 224 SRYKIKQLSAGSNTSAALTEDGELYMWGDN--SEGQIGLASESNVCVPCRV---VIGKPV 278

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG------HGDRISVSTPREVDSLKGLRTVR 396
           S VSCG +H+A+VT+ G+L+TFG+   G LG         RI    P+ V  + G +  +
Sbjct: 279 SWVSCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRI----PQLVPGISG-KVNQ 333

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVE 455
            ACG  HT A+ E  V             +T+G G+ G+LG G       VP  V  L +
Sbjct: 334 VACGGGHTVALTEEDV-------------YTFGLGEFGQLGLGTCIFETSVPKVVEHLRK 380

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF--- 509
                V+CG + T  ++ TG +YT G   +G+LG   +   N  +PT     L  NF   
Sbjct: 381 QKIHYVACGENHTALISDTGLMYTFGDGRHGKLGLGEENFTNQFIPT-----LCSNFLRF 435

Query: 510 -VEEIACGDYHVAVL 523
            V  +ACG  H+ V 
Sbjct: 436 SVHLVACGGCHMLVF 450



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 124/271 (45%), Gaps = 46/271 (16%)

Query: 131 KVLLPSE---SACGSVNSL----------SSGGSDGRTG----------HLKGLSGDTFR 167
           K L P +   +ACG  ++L          + G SDG+ G          H        ++
Sbjct: 168 KALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYK 227

Query: 168 VSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAV 227
           +   SA S++S     D     G++++WG+             S    G+  +S V    
Sbjct: 228 IKQLSAGSNTSAALTED-----GELYMWGD------------NSEGQIGLASESNVCVPC 270

Query: 228 ESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNI 285
              +   V  ++CG  H+ALVT  GE++++GE   G+LG   +   +H  P+L+  +   
Sbjct: 271 RVVIGKPVSWVSCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPGISG- 329

Query: 286 NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
            V  VACG  HT A+T   D+YT+G     FG LG G  +      K+   L    +  V
Sbjct: 330 KVNQVACGGGHTVALT-EEDVYTFGLG--EFGQLGLGTCIFETSVPKVVEHLRKQKIHYV 386

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
           +CG  HTA+++  G ++TFGDG  G LG G+
Sbjct: 387 ACGENHTALISDTGLMYTFGDGRHGKLGLGE 417



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 13/136 (9%)

Query: 170 LSSAVSSSSQGSGHDDGDSLGDVFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVE 228
           +S  V+  + G GH    +  DV+ +G   G+ G LG G            ++ VPK VE
Sbjct: 327 ISGKVNQVACGGGHTVALTEEDVYTFG--LGEFGQLGLGT--------CIFETSVPKVVE 376

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNIN 286
                 +  +ACG  H AL++  G ++++G+   G+LG G ++  +   P L       +
Sbjct: 377 HLRKQKIHYVACGENHTALISDTGLMYTFGDGRHGKLGLGEENFTNQFIPTLCSNFLRFS 436

Query: 287 VELVACGEHHTCAVTL 302
           V LVACG  H     +
Sbjct: 437 VHLVACGGCHMLVFAI 452



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 10/99 (10%)

Query: 474 TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           +G V+T G   + +         +P++    L  + + +++CGD H A +T  +++Y  G
Sbjct: 97  SGAVFTFGKSKFAE--------NIPSKF--WLRNDTLAQLSCGDEHTAFVTGNSKLYMLG 146

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
               G+LG G     N P+ V+ALK ++VK   CG + T
Sbjct: 147 SNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHT 185


>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
          Length = 1024

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 120/217 (55%), Gaps = 15/217 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACG 293
           +  I CG  H+  ++K GE+F+WG+ L G+LG G      + P++++ L  + +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           E H+ A+++SG++Y+WG + C  G LG G+  S   P  + G L+   V  V+CG  H+A
Sbjct: 200 EAHSTALSMSGNIYSWGKNEC--GQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSA 256

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++T  G LFTFG G  G LGH    +   P  V  L G R  + ACG WHT A V  +  
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDL-- 314

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
                    GK+F++G G  G+LG+G    +L+P  V
Sbjct: 315 ---------GKVFSFGSGKDGQLGNGGTRDQLMPLPV 342



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 140/290 (48%), Gaps = 28/290 (9%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK I   KN+ +  V  G  H   ++  G  + +   +     + H    S+   KK   
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----MKHLRFESILQEKK--- 139

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRT 394
                 +  ++CG +H+  ++  G+LF +G    G LG G +  S +TP+ V+ L G+  
Sbjct: 140 ------IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
            + + G  H+ A+              SG +++WG  + G+LG G  E++  P+ +  L 
Sbjct: 194 AQISAGEAHSTAL------------SMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLD 241

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA 514
                 V+CG S +  LT  G ++T G+  +GQLG      +L   +  +L    V +IA
Sbjct: 242 NQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIA 301

Query: 515 CGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
           CG +H +A ++   +V+++G G +G+LG+G T D+  P  V+    +++K
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 26/268 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           PK ++    + + ++  G  H  +++  G+ F +            +  + H +    L+
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
              +  + CG++H+ A++  G+++ W G N + G LG G +       ++   L G+ ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAW-GQNLH-GQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            +S G  H+  ++ +G ++++G    G LG G   S   P  ++ L   +    ACG   
Sbjct: 195 QISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG--- 251

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
                    GS S+     G LFT+G G  G+LGH   +  L P  VA LV     Q++C
Sbjct: 252 ---------GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIAC 302

Query: 464 GHSLTVA-LTTTGHVYTMGSPVYGQLGD 490
           G   T+A ++  G V++ GS   GQLG+
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKDGQLGN 330



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 110/239 (46%), Gaps = 26/239 (10%)

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           + + + SV  G  H  +++S G+ F +           D  S+   R    L+  + ++ 
Sbjct: 95  KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEP 456
            CG +H+ A+               G+LF WG    G+LG G K  +   P  V  L   
Sbjct: 144 TCGDYHSLAL------------SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIAC 515
              Q+S G + + AL+ +G++Y+ G    GQLG      K  P+ +EG L    VE +AC
Sbjct: 192 PLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG-LDNQKVEFVAC 250

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G  H A+LT    ++T+G G +G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 13/187 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+    G LG G     +          P+ VE    + +  I+ G  H+  ++
Sbjct: 157 GELFAWGQ-NLHGQLGVGRKFPSTTT--------PQIVEHLAGVPLAQISAGEAHSTALS 207

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G ++SWG+   G+LG G       P LI+ L N  VE VACG  H+  +T  G ++T+
Sbjct: 208 MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G      G LGH +  +   P  L   L G  V+ ++CG WHT A V+  G++F+FG G 
Sbjct: 268 GAG--KHGQLGHNSTQNELRP-CLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 369 FGVLGHG 375
            G LG+G
Sbjct: 325 DGQLGNG 331



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 72/129 (55%), Gaps = 7/129 (5%)

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF- 509
           + L E    Q++CG   ++AL+  G ++  G  ++GQLG      K P+    ++ ++  
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLA 189

Query: 510 ---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
              + +I+ G+ H   L+    +Y+WGK   G+LG G T+ ++ PSL+E L +++V+ + 
Sbjct: 190 GVPLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA 249

Query: 567 CGTSFTAAI 575
           CG S +A +
Sbjct: 250 CGGSHSALL 258


>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
          Length = 963

 Score =  131 bits (329), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 124/215 (57%), Gaps = 15/215 (6%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVAC 292
           ++  I CG  H+  ++K GE+F+WG+ L G+LG G + +  S P++++ L  + +  ++ 
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           GE H+ A+++SG++Y+WG ++C  G LG G+  +   P  +   L+   V  ++CG  HT
Sbjct: 213 GEAHSMALSMSGNVYSWGRNDC--GQLGLGHTYNKDSPSCIEA-LDDQKVEFLACGGSHT 269

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           A++T +G +FTFGDG +G LGH    +   P  V  L G R  + ACG  HT A V  M 
Sbjct: 270 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTLAYVSDM- 328

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                     GK+F++G G  G+LG+G    +L+P
Sbjct: 329 ----------GKVFSFGSGKEGQLGNGGTCNQLMP 353



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 137/280 (48%), Gaps = 33/280 (11%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK I   K + +  +  GE H   ++  G  + +  S      + H          +   
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS------IEHA---------RFQC 147

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLR 393
            L+  ++  ++CG +H+  ++  G+LF +G    G LG G RI  S STP  V++L G+ 
Sbjct: 148 ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTPEIVENLSGVP 206

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
            V+ + G  H+ A+              SG +++WG  D G+LG G    +  P+C+ AL
Sbjct: 207 LVQISAGEAHSMAL------------SMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEAL 254

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEE 512
            +     ++CG S T  LT +G V+T G   YGQLG      +L P  V G L  N V +
Sbjct: 255 DDQKVEFLACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAG-LVGNRVTQ 313

Query: 513 IACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
           IACG  H +A ++   +V+++G G  G+LG+G T ++  P
Sbjct: 314 IACGRQHTLAYVSDMGKVFSFGSGKEGQLGNGGTCNQLMP 353



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 27/268 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           PK ++    + + ++  G  H  +++  G+ F +               + H +    L+
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQ 150

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
             N+  + CG++H+ A++  G+++ W G N + G LG G   +     ++   L G+ + 
Sbjct: 151 EKNIIQITCGDYHSLALSKGGELFAW-GQNLD-GQLGVGRIFASTSTPEIVENLSGVPLV 208

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            +S G  H+  ++ +G ++++G    G LG G   +  +P  +++L   +    ACG  H
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGSH 268

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           TA + +            SG +FT+GDG  G+LGH   +  L P  VA LV     Q++C
Sbjct: 269 TALLTK------------SGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIAC 316

Query: 464 GHSLTVA-LTTTGHVYTMGSPVYGQLGD 490
           G   T+A ++  G V++ GS   GQLG+
Sbjct: 317 GRQHTLAYVSDMGKVFSFGSGKEGQLGN 344



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 15/197 (7%)

Query: 190 GDVFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           G++F WG+   DG LG G I  S S          P+ VE+   + +  I+ G  H+  +
Sbjct: 171 GELFAWGQ-NLDGQLGVGRIFASTS---------TPEIVENLSGVPLVQISAGEAHSMAL 220

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           +  G V+SWG    G+LG G   +   P  I+AL +  VE +ACG  HT  +T SG ++T
Sbjct: 221 SMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGSHTALLTKSGLVFT 280

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDG 367
           +G  +  +G LGH +  +   P  + G L G  V+ ++CG  HT A V+  G++F+FG G
Sbjct: 281 FG--DGKYGQLGHNSTQNELRPCLVAG-LVGNRVTQIACGRQHTLAYVSDMGKVFSFGSG 337

Query: 368 TFGVLGHGDRISVSTPR 384
             G LG+G   +   PR
Sbjct: 338 KEGQLGNGGTCNQLMPR 354



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 106/237 (44%), Gaps = 27/237 (11%)

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           + + S+  G  H  V++S G+ F +            + S+   R    L+    ++  C
Sbjct: 112 MKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQEKNIIQITC 159

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNF 458
           G +H+ A+               G+LF WG    G+LG G   A    P  V  L     
Sbjct: 160 GDYHSLAL------------SKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 207

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            Q+S G + ++AL+ +G+VY+ G    GQLG     N   P+ +E  L    VE +ACG 
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEA-LDDQKVEFLACGG 266

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            H A+LT    V+T+G G  G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 267 SHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTLA 323



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 7/148 (4%)

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           DG      +  + AR    C+  L E N  Q++CG   ++AL+  G ++  G  + GQLG
Sbjct: 130 DGKPFEYKYSIEHARF--QCI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLG 185

Query: 490 DPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
             +  A+   P  VE  L+   + +I+ G+ H   L+    VY+WG+   G+LG G T +
Sbjct: 186 VGRIFASTSTPEIVEN-LSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYN 244

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           ++ PS +EAL D++V+ + CG S TA +
Sbjct: 245 KDSPSCIEALDDQKVEFLACGGSHTALL 272


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 120/217 (55%), Gaps = 15/217 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACG 293
           +  I CG  H+  ++K GE+F+WG+ L G+LG G      + P++++ L  + +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           E H+ A+++SG++Y+WG + C  G LG G+  S   P  + G L+   V  V+CG  H+A
Sbjct: 200 EAHSMALSMSGNIYSWGKNEC--GQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSA 256

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++T  G LFTFG G  G LGH    +   P  V  L G R  + ACG WHT A V  +  
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDL-- 314

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
                    GK+F++G G  G+LG+G    +L+P  V
Sbjct: 315 ---------GKVFSFGSGKDGQLGNGGTRDQLMPLPV 342



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 140/290 (48%), Gaps = 28/290 (9%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK I   KN+ +  V  G  H   ++  G  + +   +     + H    S+   KK   
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----MKHLRFESILQEKK--- 139

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRT 394
                 +  ++CG +H+  ++  G+LF +G    G LG G +  S +TP+ V+ L G+  
Sbjct: 140 ------IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
            + + G  H+ A+              SG +++WG  + G+LG G  E++  P+ +  L 
Sbjct: 194 AQISAGEAHSMAL------------SMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLD 241

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA 514
                 V+CG S +  LT  G ++T G+  +GQLG      +L   +  +L    V +IA
Sbjct: 242 NQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIA 301

Query: 515 CGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
           CG +H +A ++   +V+++G G +G+LG+G T D+  P  V+    +++K
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 26/268 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           PK ++    + + ++  G  H  +++  G+ F +            +  + H +    L+
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
              +  + CG++H+ A++  G+++ W G N + G LG G +       ++   L G+ ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAW-GQNLH-GQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            +S G  H+  ++ +G ++++G    G LG G   S   P  ++ L   +    ACG   
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG--- 251

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
                    GS S+     G LFT+G G  G+LGH   +  L P  VA LV     Q++C
Sbjct: 252 ---------GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIAC 302

Query: 464 GHSLTVA-LTTTGHVYTMGSPVYGQLGD 490
           G   T+A ++  G V++ GS   GQLG+
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKDGQLGN 330



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 26/239 (10%)

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           + + + SV  G  H  +++S G+ F +           D  S+   R    L+  + ++ 
Sbjct: 95  KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEP 456
            CG +H+ A+               G+LF WG    G+LG G K  +   P  V  L   
Sbjct: 144 TCGDYHSLAL------------SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIAC 515
              Q+S G + ++AL+ +G++Y+ G    GQLG      K  P+ +EG L    VE +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG-LDNQKVEFVAC 250

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G  H A+LT    ++T+G G +G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 13/187 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+    G LG G     +          P+ VE    + +  I+ G  H+  ++
Sbjct: 157 GELFAWGQ-NLHGQLGVGRKFPSTTT--------PQIVEHLAGVPLAQISAGEAHSMALS 207

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G ++SWG+   G+LG G       P LI+ L N  VE VACG  H+  +T  G ++T+
Sbjct: 208 MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G      G LGH +  +   P  L   L G  V+ ++CG WHT A V+  G++F+FG G 
Sbjct: 268 GAG--KHGQLGHNSTQNELRP-CLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 369 FGVLGHG 375
            G LG+G
Sbjct: 325 DGQLGNG 331



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 72/129 (55%), Gaps = 7/129 (5%)

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF- 509
           + L E    Q++CG   ++AL+  G ++  G  ++GQLG      K P+    ++ ++  
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLA 189

Query: 510 ---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
              + +I+ G+ H   L+    +Y+WGK   G+LG G T+ ++ PSL+E L +++V+ + 
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA 249

Query: 567 CGTSFTAAI 575
           CG S +A +
Sbjct: 250 CGGSHSALL 258


>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera]
 gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 166/348 (47%), Gaps = 30/348 (8%)

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           G+LG G   +   A  +++ F P A        V  ++    HAA V + GEVF+ G+  
Sbjct: 140 GVLGHGPETTQCVAFSRIN-FPPLA-------HVAQVSASHNHAAFVMQSGEVFTCGDNS 191

Query: 262 GGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 320
               GHG     +  P+L++ALK +  + VA G   T  +T+ G +YT G +    G LG
Sbjct: 192 SFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTN--THGQLG 249

Query: 321 HGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 379
           HG+ +    PK +   LEG+  V  ++ GP +   VT  G + +FG G+   LGHG++ +
Sbjct: 250 HGDTVDRRTPKIVE-LLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHN 308

Query: 380 VSTPREVDSL--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG 437
              PR + S   K +  VR + G  H  A+             SSG ++TWG G  G LG
Sbjct: 309 ELRPRAIQSFRRKTIHVVRISAGDEHVVALD------------SSGFVYTWGKGYCGALG 356

Query: 438 HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---AN 494
           HGD+  +  P  +++L      QV      T  L  TG VY  G   +G LG P    ++
Sbjct: 357 HGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASD 416

Query: 495 GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
             +   +   L  +++ +I+ G YH   + ++ +++ +G     +LGH
Sbjct: 417 KVMRPWILDSLRGHYISQISTGLYHTVAVNNKGQIFGFGDNERAQLGH 464



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 137/275 (49%), Gaps = 23/275 (8%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP-KKLNGPLEGIHVSSVSCG 348
           +  G +HT  +  S  +Y+ G S C  G+LGHG E +  +   ++N P    HV+ VS  
Sbjct: 116 ITTGRYHTLLIKDS-SVYSCGSSLC--GVLGHGPETTQCVAFSRINFPPLA-HVAQVSAS 171

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAV 407
             H A V  +G++FT GD +    GHGD +  +  PR V++LKG+   + A G+  T  +
Sbjct: 172 HNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFL 231

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGH 465
                          G ++T G    G+LGHGD   R  P  V  L  V P   Q++ G 
Sbjct: 232 T------------MKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGP-VVQIAAGP 278

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNF-VEEIACGDYHVAVL 523
           S  +A+T  G V++ GS     LG  + + +L P  ++    K   V  I+ GD HV  L
Sbjct: 279 SYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVAL 338

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
            S   VYTWGKG  G LGHGD  D+  P ++ +LK
Sbjct: 339 DSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLK 373



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 150/347 (43%), Gaps = 33/347 (9%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVD-------SDVSHPKLIDALKNINVELVACGE 294
           GR+  L+ K   V+S G  L G LGHG +       S ++ P L       +V  V+   
Sbjct: 119 GRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLA------HVAQVSASH 172

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
           +H   V  SG+++T G  N +F   GHG+ +      +L   L+G+    V+ G   T  
Sbjct: 173 NHAAFVMQSGEVFTCG-DNSSF-CCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVF 230

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           +T  G ++T G  T G LGHGD +   TP+ V+ L+G+              VV++  G 
Sbjct: 231 LTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGV------------GPVVQIAAGP 278

Query: 415 SSSSNCSS-GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF--CQVSCGHSLTVAL 471
           S +   +  G + ++G G    LGHG++   L P  + +         ++S G    VAL
Sbjct: 279 SYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVAL 338

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
            ++G VYT G    G LG      K    +   L  +   ++        VL     VY 
Sbjct: 339 DSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398

Query: 532 WGKGANGRLG---HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +G    G LG    G +D    P ++++L+   +  I  G   T A+
Sbjct: 399 FGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAV 445



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 139/297 (46%), Gaps = 27/297 (9%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P+ VE+   +  + +A G      +T +G V++ G    G+LGHG   D   PK+++ 
Sbjct: 205 FRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVEL 264

Query: 282 LKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEG 339
           L+ +  V  +A G  +  AVT  G ++++G S  NF  LGHG + +   P+ +     + 
Sbjct: 265 LEGVGPVVQIAAGPSYAMAVTDDGTVHSFG-SGSNF-CLGHGEQHNELRPRAIQSFRRKT 322

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           IHV  +S G  H   + S+G ++T+G G  G LGHGD I  +TP  + SLK    V+   
Sbjct: 323 IHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCA 382

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR---LVPTCVAALVEP 456
               T  +V+            +G ++ +G    G LG  D+ A    + P  + +L   
Sbjct: 383 RKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGH 430

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEE 512
              Q+S G   TVA+   G ++  G     QLG     G  +PT +       FV+E
Sbjct: 431 YISQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDTLRGCPVPTEI-------FVQE 480



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 13/134 (9%)

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF-----VEEIA 514
           Q++ G   T+ L     VY+ GS + G LG    +G   T+       NF     V +++
Sbjct: 115 QITTGRYHTL-LIKDSSVYSCGSSLCGVLG----HGPETTQCVAFSRINFPPLAHVAQVS 169

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTA 573
               H A +    EV+T G  ++   GHGDT    F P LVEALK    K +  G SFT 
Sbjct: 170 ASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTV 229

Query: 574 AICL--HKWVSGVD 585
            + +  H +  G +
Sbjct: 230 FLTMKGHVYTCGTN 243


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 120/217 (55%), Gaps = 15/217 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACG 293
           +  I CG  H+  ++K GE+F+WG+ L G+LG G      + P++++ L  + +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           E H+ A+++SG++Y+WG + C  G LG G+  S   P  + G L+   V  V+CG  H+A
Sbjct: 200 EAHSMALSMSGNIYSWGKNEC--GQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSA 256

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++T  G LFTFG G  G LGH    +   P  V  L G R  + ACG WHT A V  +  
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDL-- 314

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
                    GK+F++G G  G+LG+G    +L+P  V
Sbjct: 315 ---------GKVFSFGSGKDGQLGNGGTRDQLMPLPV 342



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 140/290 (48%), Gaps = 28/290 (9%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK I   KN+ +  V  G  H   ++  G  + +   +     + H    S+   KK   
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----MKHLRFESILQEKK--- 139

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRT 394
                 +  ++CG +H+  ++  G+LF +G    G LG G +  S +TP+ V+ L G+  
Sbjct: 140 ------IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
            + + G  H+ A+              SG +++WG  + G+LG G  E++  P+ +  L 
Sbjct: 194 AQISAGEAHSMAL------------SMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLD 241

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA 514
                 V+CG S +  LT  G ++T G+  +GQLG      +L   +  +L    V +IA
Sbjct: 242 NQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIA 301

Query: 515 CGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
           CG +H +A ++   +V+++G G +G+LG+G T D+  P  V+    +++K
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 26/268 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           PK ++    + + ++  G  H  +++  G+ F +            +  + H +    L+
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
              +  + CG++H+ A++  G+++ W G N + G LG G +       ++   L G+ ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAW-GQNLH-GQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            +S G  H+  ++ +G ++++G    G LG G   S   P  ++ L   +    ACG   
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG--- 251

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
                    GS S+     G LFT+G G  G+LGH   +  L P  VA LV     Q++C
Sbjct: 252 ---------GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIAC 302

Query: 464 GHSLTVA-LTTTGHVYTMGSPVYGQLGD 490
           G   T+A ++  G V++ GS   GQLG+
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKDGQLGN 330



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 26/239 (10%)

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           + + + SV  G  H  +++S G+ F +           D  S+   R    L+  + ++ 
Sbjct: 95  KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEP 456
            CG +H+ A+               G+LF WG    G+LG G K  +   P  V  L   
Sbjct: 144 TCGDYHSLAL------------SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIAC 515
              Q+S G + ++AL+ +G++Y+ G    GQLG      K  P+ +EG L    VE +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG-LDNQKVEFVAC 250

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G  H A+LT    ++T+G G +G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 13/187 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+    G LG G     +          P+ VE    + +  I+ G  H+  ++
Sbjct: 157 GELFAWGQ-NLHGQLGVGRKFPSTTT--------PQIVEHLAGVPLAQISAGEAHSMALS 207

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G ++SWG+   G+LG G       P LI+ L N  VE VACG  H+  +T  G ++T+
Sbjct: 208 MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G      G LGH +  +   P  L   L G  V+ ++CG WHT A V+  G++F+FG G 
Sbjct: 268 GAG--KHGQLGHNSTQNELRP-CLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 369 FGVLGHG 375
            G LG+G
Sbjct: 325 DGQLGNG 331



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 72/129 (55%), Gaps = 7/129 (5%)

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF- 509
           + L E    Q++CG   ++AL+  G ++  G  ++GQLG      K P+    ++ ++  
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLA 189

Query: 510 ---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
              + +I+ G+ H   L+    +Y+WGK   G+LG G T+ ++ PSL+E L +++V+ + 
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA 249

Query: 567 CGTSFTAAI 575
           CG S +A +
Sbjct: 250 CGGSHSALL 258


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 120/217 (55%), Gaps = 15/217 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACG 293
           +  I CG  H+  ++K GE+F+WG+ L G+LG G      + P++++ L  + +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           E H+ A+++SG++Y+WG + C  G LG G+  S   P  + G L+   V  V+CG  H+A
Sbjct: 200 EAHSMALSMSGNIYSWGKNEC--GQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSA 256

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++T  G LFTFG G  G LGH    +   P  V  L G R  + ACG WHT A V  +  
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDL-- 314

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
                    GK+F++G G  G+LG+G    +L+P  V
Sbjct: 315 ---------GKVFSFGSGKDGQLGNGGTRDQLMPLPV 342



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 140/290 (48%), Gaps = 28/290 (9%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK I   KN+ +  V  G  H   ++  G  + +   +     + H    S+   KK   
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----MKHLRFESILQEKK--- 139

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRT 394
                 +  ++CG +H+  ++  G+LF +G    G LG G +  S +TP+ V+ L G+  
Sbjct: 140 ------IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
            + + G  H+ A+              SG +++WG  + G+LG G  E++  P+ +  L 
Sbjct: 194 AQISAGEAHSMAL------------SMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLD 241

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA 514
                 V+CG S +  LT  G ++T G+  +GQLG      +L   +  +L    V +IA
Sbjct: 242 NQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIA 301

Query: 515 CGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
           CG +H +A ++   +V+++G G +G+LG+G T D+  P  V+    +++K
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 26/268 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           PK ++    + + ++  G  H  +++  G+ F +            +  + H +    L+
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
              +  + CG++H+ A++  G+++ W G N + G LG G +       ++   L G+ ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAW-GQNLH-GQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            +S G  H+  ++ +G ++++G    G LG G   S   P  ++ L   +    ACG   
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG--- 251

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
                    GS S+     G LFT+G G  G+LGH   +  L P  VA LV     Q++C
Sbjct: 252 ---------GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIAC 302

Query: 464 GHSLTVA-LTTTGHVYTMGSPVYGQLGD 490
           G   T+A ++  G V++ GS   GQLG+
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKDGQLGN 330



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 26/239 (10%)

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           + + + SV  G  H  +++S G+ F +           D  S+   R    L+  + ++ 
Sbjct: 95  KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEP 456
            CG +H+ A+               G+LF WG    G+LG G K  +   P  V  L   
Sbjct: 144 TCGDYHSLAL------------SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIAC 515
              Q+S G + ++AL+ +G++Y+ G    GQLG      K  P+ +EG L    VE +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG-LDNQKVEFVAC 250

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G  H A+LT    ++T+G G +G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 13/187 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+    G LG G     +          P+ VE    + +  I+ G  H+  ++
Sbjct: 157 GELFAWGQ-NLHGQLGVGRKFPSTTT--------PQIVEHLAGVPLAQISAGEAHSMALS 207

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G ++SWG+   G+LG G       P LI+ L N  VE VACG  H+  +T  G ++T+
Sbjct: 208 MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G      G LGH +  +   P  L   L G  V+ ++CG WHT A V+  G++F+FG G 
Sbjct: 268 GAG--KHGQLGHNSTQNELRP-CLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 369 FGVLGHG 375
            G LG+G
Sbjct: 325 DGQLGNG 331



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 72/129 (55%), Gaps = 7/129 (5%)

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF- 509
           + L E    Q++CG   ++AL+  G ++  G  ++GQLG      K P+    ++ ++  
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLA 189

Query: 510 ---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
              + +I+ G+ H   L+    +Y+WGK   G+LG G T+ ++ PSL+E L +++V+ + 
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA 249

Query: 567 CGTSFTAAI 575
           CG S +A +
Sbjct: 250 CGGSHSALL 258


>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
          Length = 1626

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 177/398 (44%), Gaps = 67/398 (16%)

Query: 192  VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
            ++ WG  +  G LG G H + +     +  FV   VE      V  +ACG  H+  +T  
Sbjct: 815  LYTWGH-SSYGCLGVGPHMTKTATPNPVSWFVYIRVE------VIQVACGRNHSIALTTN 867

Query: 252  GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
            G V+SWG    G+LG G      +P L+D+L N  +  V+ G++H+ A++ SG ++TWG 
Sbjct: 868  G-VYSWGSNHYGQLGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGW 926

Query: 312  SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
                +G LGHG       PK L   LE  ++ S   G  H+ ++TS G++FTFG G+FG 
Sbjct: 927  GV--YGQLGHGAIDDCEKPKLLKS-LENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQ 983

Query: 372  LGHGDRISVSTPREVDSL-KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG- 429
            LG+G    +++P  V  L + ++ +  A   +H  A+ +V            G+L+TWG 
Sbjct: 984  LGNGSTTKITSPVPVYGLPEPIKCIYTA--YFHNLALSDV------------GRLYTWGS 1029

Query: 430  ----------------------------DGDRGRLGHGDKEARLVPTCV-AALVEPNFCQ 460
                                        D +   L   D    L PT V  + +  +  Q
Sbjct: 1030 SPQVLRFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQ 1089

Query: 461  VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV-----------EGKLTKNF 509
            + CG   +  ++TTG +YT G  + GQLG      +L   V               + + 
Sbjct: 1090 MCCGCHHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSL 1149

Query: 510  VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            ++E+ CG      L +  +++ WG    G+LG    +D
Sbjct: 1150 IKEVRCGADFTLALDAANKLWGWGSNHEGQLGKIPEED 1187



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 175/382 (45%), Gaps = 62/382 (16%)

Query: 238  IACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVEL--VACGE 294
            +  G  HAA + +  ++++WG    G LG G   +  + P  +     I VE+  VACG 
Sbjct: 800  LGAGWAHAAHI-RNHKLYTWGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGR 858

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
            +H+ A+T +G +Y+WG ++  +G LG G       P  ++  L    + SVS G +H+  
Sbjct: 859  NHSIALTTNG-VYSWGSNH--YGQLGTGRRGQAPYPMLVDS-LSNELIVSVSAGQYHSLA 914

Query: 355  VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
            ++++GQL+T+G G +G LGHG       P+ + SL+    + A  G  H+  +       
Sbjct: 915  ISASGQLWTWGWGVYGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHSIILT------ 968

Query: 415  SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                  S+GK+FT+G G  G+LG+G       P  V  L EP  C +   +   +AL+  
Sbjct: 969  ------SNGKVFTFGSGSFGQLGNGSTTKITSPVPVYGLPEPIKC-IYTAYFHNLALSDV 1021

Query: 475  GHVYTMGSP-------------VYGQL----GDPKANGKL-------------PTRVEGK 504
            G +YT GS                 QL    GD   + ++             PT V+  
Sbjct: 1022 GRLYTWGSSPQVLRFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTS 1081

Query: 505  LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV-----EALKD 559
                 + ++ CG +H AV+++  ++YTWG   +G+LG     +R  P++        + D
Sbjct: 1082 HISGDIFQMCCGCHHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVD 1141

Query: 560  KQ------VKSIVCGTSFTAAI 575
                    +K + CG  FT A+
Sbjct: 1142 SSSTSGSLIKEVRCGADFTLAL 1163



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 131/299 (43%), Gaps = 31/299 (10%)

Query: 306  MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG-----IHVSSVSCGPWHTAVVTSAGQ 360
            +YTWG S+  +G LG G  M+         P+       + V  V+CG  H+  +T+ G 
Sbjct: 815  LYTWGHSS--YGCLGVGPHMT---KTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG- 868

Query: 361  LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
            ++++G   +G LG G R     P  VDSL     V  + G +H+ A+             
Sbjct: 869  VYSWGSNHYGQLGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAI------------S 916

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            +SG+L+TWG G  G+LGHG  +    P  + +L   N      G+S ++ LT+ G V+T 
Sbjct: 917  ASGQLWTWGWGVYGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHSIILTSNGKVFTF 976

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            GS  +GQLG+  +  K+ + V        ++ I    +H   L+    +YTWG       
Sbjct: 977  GSGSFGQLGN-GSTTKITSPVPVYGLPEPIKCIYTAYFHNLALSDVGRLYTWGSSPQVLR 1035

Query: 541  GHGDTDDRNFPSLV----EALKDKQVKSIVCG---TSFTAAICLHKWVSGVDQSMCSGC 592
             H  +  R    LV    +   D ++ ++         +  +     +SG    MC GC
Sbjct: 1036 FHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGC 1094



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 149/371 (40%), Gaps = 73/371 (19%)

Query: 180  GSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIA 239
            G  H    +   V+ WG     G LG G      Y         P  V+S     + +++
Sbjct: 857  GRNHSIALTTNGVYSWGS-NHYGQLGTGRRGQAPY---------PMLVDSLSNELIVSVS 906

Query: 240  CGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA 299
             G  H+  ++  G++++WG  + G+LGHG   D   PKL+ +L+N N+     G  H+  
Sbjct: 907  AGQYHSLAISASGQLWTWGWGVYGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHSII 966

Query: 300  VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
            +T +G ++T+G  +  FG LG+G+   +  P  + G  E I    +    +H   ++  G
Sbjct: 967  LTSNGKVFTFGSGS--FGQLGNGSTTKITSPVPVYGLPEPI--KCIYTAYFHNLALSDVG 1022

Query: 360  QLFTFG-----------------------------DGTFGVLGHGDRISVSTPREVDS-- 388
            +L+T+G                             D     L   D +   +P  VD+  
Sbjct: 1023 RLYTWGSSPQVLRFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSH 1082

Query: 389  LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
            + G    +  CG  H+A +             ++G+L+TWG    G+LG      RLVPT
Sbjct: 1083 ISG-DIFQMCCGCHHSAVI------------STTGQLYTWGLNLDGQLGVSGIRERLVPT 1129

Query: 449  CVAALVEPN-------------FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 495
                LV P                +V CG   T+AL     ++  GS   GQLG      
Sbjct: 1130 --VTLVGPPSVIVDSSSTSGSLIKEVRCGADFTLALDAANKLWGWGSNHEGQLGKIPEED 1187

Query: 496  KLPTRVEGKLT 506
               T ++GK+ 
Sbjct: 1188 LAKTLLDGKMV 1198


>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
          Length = 516

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 185/407 (45%), Gaps = 33/407 (8%)

Query: 170 LSSAVSSSSQGSGHDDGDSLGD-VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
           LSS  ++S    G + G S  + VF WG  +   +         + A  +     P+ + 
Sbjct: 108 LSSIAAASCNDGGTNGGPSFAEEVFCWGSNSSQQL---------TDATPEDKLLYPRNL- 157

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
            +V   V ++  G      V   G V + G+   GRLG+G  +  S P LI+    +   
Sbjct: 158 -SVYGKVMSMTAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKI 216

Query: 289 LVACG-EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 347
           L + G + H+ A+  +G ++TWG  + ++G LGHG+  +   PK +      + V +  C
Sbjct: 217 LTSKGSDGHSIAIGKNGQIWTWG--DGDYGKLGHGDSTTQKSPKLIEALASRVIVDA-DC 273

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  H+A V  AG L+ +G+G +G LG GD +  S P +V  ++     +  CG  HT  +
Sbjct: 274 GHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIR--EASQVVCGFNHTVVL 331

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
                      +     ++++G  + G+LGHGD   +  P  + AL      Q++ G  +
Sbjct: 332 -----------STDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQI 380

Query: 468 TVALTTTGHVYTMG-SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           + A+T  G +Y  G  P  G  G       LP  V G L+   V +IA G+ HV  LT  
Sbjct: 381 SAAVTREGALYVWGFGPCLGN-GSSDETFMLPKVVRG-LSGRVVIDIAVGENHVVALTKD 438

Query: 527 TEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFT 572
             V+TWG   NG+ G G        P +V+ L    ++ +  GT+ T
Sbjct: 439 GLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHT 485



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 138/283 (48%), Gaps = 24/283 (8%)

Query: 244 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
           H+  + K G++++WG+   G+LGHG  +    PKLI+AL +  +    CG  H+ AV  +
Sbjct: 225 HSIAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDA 284

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ-LF 362
           G +Y WG    ++G LG G+ +   +P ++    E    S V CG  HT V+++ G+ ++
Sbjct: 285 GHLYMWG--EGDYGRLGLGDALQRSVPVQVPDIRE---ASQVVCGFNHTVVLSTDGRTVW 339

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           +FG    G LGHGD      P+ +D+L+GL   + A G   +AAV               
Sbjct: 340 SFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTR------------E 387

Query: 423 GKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           G L+ WG G    LG+G   E  ++P  V  L       ++ G +  VALT  G V+T G
Sbjct: 388 GALYVWGFGP--CLGNGSSDETFMLPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWG 445

Query: 482 SPVYGQL--GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
           +   GQ   G   A    P  V+G L    ++++  G  H  V
Sbjct: 446 NNQNGQCGTGSGMATYTSPQMVQG-LHGAGIQQVTAGTTHTFV 487



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 143/284 (50%), Gaps = 28/284 (9%)

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           +++ WG SN +  L     E  L  P+ L+  + G  V S++ G + T  V S G +   
Sbjct: 130 EVFCWG-SNSSQQLTDATPEDKLLYPRNLS--VYG-KVMSMTAGQYCTFAVLSNGTVMAN 185

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV-WHTAAVVEVMVGSSSSSNCSSG 423
           G G++G LG+G   S S+P  ++    +R +  + G   H+ A+ +            +G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSIAIGK------------NG 233

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           +++TWGDGD G+LGHGD   +  P  + AL         CGH  + A+   GH+Y  G  
Sbjct: 234 QIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEG 293

Query: 484 VYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVYTWGKGANGRL 540
            YG+LG   A  + +P +V          ++ CG  H  VL++  RT V+++G   NG+L
Sbjct: 294 DYGRLGLGDALQRSVPVQVP---DIREASQVVCGFNHTVVLSTDGRT-VWSFGAAENGKL 349

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKW 580
           GHGDT+ +  P +++AL+   +  I  GT  +AA+     L+ W
Sbjct: 350 GHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVW 393


>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
          Length = 821

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 169/360 (46%), Gaps = 63/360 (17%)

Query: 224 PKAVESAVVLDVQNIACGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           P  V++     +  ++CG  H+ A   + G V+ WG  L GRLG+  +  V  P++++ L
Sbjct: 151 PTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEPQVLECL 210

Query: 283 K-----NINVELVACGEHHTCAV----------TLSGDMYTWGGSN-CNFGL--LGHGNE 324
           K      + V  ++CGE+HT A+          T    ++ WG ++    G+     GN 
Sbjct: 211 KIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNN 270

Query: 325 MSLWLPKKLNGP--------------------LEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
             +   ++++ P                    L G+H S      +++A +TS G ++T+
Sbjct: 271 EDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASY-----YYSAALTSNGNVYTW 325

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G G FG LG+ D      P+ +  L G +  R + G +H AA+ E             G+
Sbjct: 326 GSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITE------------QGQ 373

Query: 425 LFTWGDGDRGRLGHGD--KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +F+WG G  G+LGHG    E ++ P  V+AL   +   +SCG S T+ALT  G VY+ G 
Sbjct: 374 VFSWGRGINGQLGHGSVLNEDQVRP--VSALQNIHIIDISCGESHTLALTNKGEVYSWGG 431

Query: 483 PVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              GQLG        LP +V   L  N + +I+ G  H + LT   +++TWG    G+LG
Sbjct: 432 GQLGQLGHGDFLRQSLPIKV-ANLEDN-IAQISAGKRHSSALTDDGKLFTWGSNEYGQLG 489



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 164/343 (47%), Gaps = 48/343 (13%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGD--MYTWGGSNCNFGLLGHG----------- 322
           P+ + AL+  N+  V CG   T  +T S +  +++WG SN N   LGH            
Sbjct: 85  PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWG-SNQN-AKLGHSYYKPSPNNVSS 142

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           + + +     +   LE   +  +SCG  H+ A    +G ++ +G G  G LG+ +   V 
Sbjct: 143 SSIQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQ 202

Query: 382 TPREVDSLK-----GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL 436
            P+ ++ LK      ++ ++ +CG  HT A++++     +    S  KLF WG+ D+ +L
Sbjct: 203 EPQVLECLKIAMEIKMKVLQISCGENHTLALIQM--PPQNEGETSQNKLFVWGNNDKLQL 260

Query: 437 G-----HGDKE----ARLVPTCVAALVEPNFCQ--------------VSCGHSLTVALTT 473
           G      G+ E    AR +   V   ++P+  Q              V   +  + ALT+
Sbjct: 261 GMDNQADGNNEDMQSAREI--SVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTS 318

Query: 474 TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
            G+VYT GS  +G+LG      +   +V  +LT   V  I+ G YH A +T + +V++WG
Sbjct: 319 NGNVYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITEQGQVFSWG 378

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
           +G NG+LGHG   + +    V AL++  +  I CG S T A+ 
Sbjct: 379 RGINGQLGHGSVLNEDQVRPVSALQNIHIIDISCGESHTLALT 421



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 177/404 (43%), Gaps = 67/404 (16%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGE--VFSWGEELGGRLGHGVDSD--------- 272
           P+ V +    ++  + CG      +TK  E  VFSWG     +LGH              
Sbjct: 85  PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144

Query: 273 ---VSHPKLIDALKNINVELVACGEHHTCAVT-LSGDMYTWG-GSNCNFGLLGHGNEMSL 327
              V  P ++ AL+N  ++ ++CG  H+ A +  SG +Y WG G N   G LG+ NE  +
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLN---GRLGNENEGVV 201

Query: 328 WLPKKLNG---PLE-GIHVSSVSCGPWHTAVV----------TSAGQLFTFGDGTFGVLG 373
             P+ L      +E  + V  +SCG  HT  +          TS  +LF +G+     LG
Sbjct: 202 QEPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLG 261

Query: 374 -----HGDRISVSTPREVDSLKGL----------------RTVRAACGVWHTAAVVEVMV 412
                 G+   + + RE+     L                + +      +++AA+     
Sbjct: 262 MDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAAL----- 316

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   S+G ++TWG G+ GRLG+ D + +  P  +  L      ++S G+    A+T
Sbjct: 317 -------TSNGNVYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAIT 369

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
             G V++ G  + GQLG      +   R    L    + +I+CG+ H   LT++ EVY+W
Sbjct: 370 EQGQVFSWGRGINGQLGHGSVLNEDQVRPVSALQNIHIIDISCGESHTLALTNKGEVYSW 429

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
           G G  G+LGHGD   ++ P  V  L+D  +  I  G   ++A+ 
Sbjct: 430 GGGQLGQLGHGDFLRQSLPIKVANLEDN-IAQISAGKRHSSALT 472



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 14/193 (7%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G+V+ WG         G   R G Y  +K     PK ++      V  I+ G  H A 
Sbjct: 318 SNGNVYTWG--------SGEFGRLG-YMDIKKQP-QPKVLKELTGFQVTRISLGYYHGAA 367

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +T+QG+VFSWG  + G+LGHG   +    + + AL+NI++  ++CGE HT A+T  G++Y
Sbjct: 368 ITEQGQVFSWGRGINGQLGHGSVLNEDQVRPVSALQNIHIIDISCGESHTLALTNKGEVY 427

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           +WGG        G     S  LP K+   LE  +++ +S G  H++ +T  G+LFT+G  
Sbjct: 428 SWGGGQLGQLGHGDFLRQS--LPIKV-ANLED-NIAQISAGKRHSSALTDDGKLFTWGSN 483

Query: 368 TFGVLGHGDRISV 380
            +G LG    ++V
Sbjct: 484 EYGQLGRQANVTV 496


>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
          Length = 815

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 166/339 (48%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H+A+VT   +++ +G    G+LG G  S +S P  + ALK   V+L ACG +HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G++Y  GG+  N G LG G+         ++       +  +S G   +A +T 
Sbjct: 100 LVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  +  +V  P++V    G      +CG +H+A V          
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQV--TIGNPVSWISCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
              + G+L+ +G+ + G+LG  ++       P  V+ + E    QV+CG   TV LT   
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA 262

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VYT G   +GQLG       L    E K+ +N  ++    I+CG+ H A++T    +YT
Sbjct: 263 -VYTFGLGQFGQLG---LGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYT 318

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N   P+L        VK + CG
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 150/309 (48%), Gaps = 27/309 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + +   +I    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G ++ WG +  + G +G  N  ++ +P+++     G  V
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDN--SEGQIGLKNVSNVCVPQQVTI---GNPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+ FG+   G LG  +++  +  TP+ V  +   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  +  + +    
Sbjct: 252 GEHTVVLTENAV-------------YTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            +SCG + T  +T  G +YT G   +G+LG   +   N  +PT     L +  V+ +ACG
Sbjct: 299 YISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL-RFIVKLVACG 357

Query: 517 DYHVAVLTS 525
             H+ V  +
Sbjct: 358 GCHMVVFAA 366



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 46/269 (17%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTG----------HLKGLSGDTFRV 168
           P KV L   +ACG  ++L S          G ++G+ G          H+        ++
Sbjct: 86  PEKVKL---AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI 142

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
              SA S++S     D     G +F+WG+             S    G+K  S V    +
Sbjct: 143 KQLSAGSNTSAALTED-----GRLFMWGD------------NSEGQIGLKNVSNVCVPQQ 185

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNIN 286
             +   V  I+CG  H+A VT  GE++ +GE   G+LG  + +  +   P+L+  +    
Sbjct: 186 VTIGNPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           ++ VACG  HT  +T +  +YT+G     FG LG G  +      K+   +    +S +S
Sbjct: 246 IQ-VACGGEHTVVLTENA-VYTFGLG--QFGQLGLGTFLFETSEPKVIENIRDQTISYIS 301

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           CG  HTA++T  G ++TFGDG  G LG G
Sbjct: 302 CGENHTALITDIGLMYTFGDGRHGKLGLG 330



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G     + P+ V+ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99


>gi|340368103|ref|XP_003382592.1| PREDICTED: hypothetical protein LOC100632986 [Amphimedon
            queenslandica]
          Length = 2287

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 144/312 (46%), Gaps = 36/312 (11%)

Query: 254  VFSWGEELGGRLGHGV---------------DSDVSHPKLIDALKNINVELVACGEHHTC 298
            +F WGE   G LG  V               D  + +   ID   +  +  ++CG  H+ 
Sbjct: 1281 MFCWGEAHDGALGLDVKEKCVMEARPNTAFGDKKIKYIAHIDTFDDTIITSISCGVKHSL 1340

Query: 299  AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
            A++  G +Y WG ++   G LG      +  P  L+ P  G  V   +CG  HT  +T  
Sbjct: 1341 ALSSDGSLYAWGDNSE--GQLGLKTLQPICKPSILSLPF-GRPVVQAACGDHHTLALTQD 1397

Query: 359  GQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G++F++G  T   LGH   +S V  P ++  L     V+  CG  H+AA+          
Sbjct: 1398 GRVFSWGKNTTSQLGHSKGLSRVLAPTQITHLISTPVVKLICGSNHSAALT--------- 1448

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                SG +F WGD  R + G G    ++  PT    +       V+CG   TV    +GH
Sbjct: 1449 ---VSGGVFLWGDNRRAQCGFGHVTTKISYPTLNEFMGRYAVSHVACGTDHTVFQVQSGH 1505

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEG--KLTKNFVEEIACGDYHVAVLTSRT-EVYTWG 533
            +YT+GS  YGQLG   A G + +R     +L    V+++ CG YH  +L   T ++ T+G
Sbjct: 1506 IYTVGSNEYGQLGR-GARGAVYSRPAPIMQLMTVVVQQVVCGRYHTTLLAKYTGDLITFG 1564

Query: 534  KGANGRLGHGDT 545
            +G  G+LG+G T
Sbjct: 1565 QGLMGQLGNGTT 1576



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 166/397 (41%), Gaps = 45/397 (11%)

Query: 118  KALSDAVL--YAAPPKVLL---PSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSS 172
            K + D+++  Y+A    LL    SE A    N L  G        LK        +S  +
Sbjct: 1198 KHMEDSIISSYSAVLVALLIQNDSEFALNVKNKLPGGNFSSLIKVLKEF------LSFMN 1251

Query: 173  AVSSSSQGSGHD----------DGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF 222
              SS S  SG D          + + L  +F WGE   DG LG  +            +F
Sbjct: 1252 MASSGSTRSGLDSVQRILKFYYERNRLSVMFCWGEA-HDGALGLDVKEKCVMEARPNTAF 1310

Query: 223  VPKAVESAVVLD------VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
              K ++    +D      + +I+CG +H+  ++  G +++WG+   G+LG      +  P
Sbjct: 1311 GDKKIKYIAHIDTFDDTIITSISCGVKHSLALSSDGSLYAWGDNSEGQLGLKTLQPICKP 1370

Query: 277  KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
             ++       V   ACG+HHT A+T  G +++WG +  +   LGH   +S  L       
Sbjct: 1371 SILSLPFGRPVVQAACGDHHTLALTQDGRVFSWGKNTTS--QLGHSKGLSRVLAPTQITH 1428

Query: 337  LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTV 395
            L    V  + CG  H+A +T +G +F +GD      G G   + +S P   + +      
Sbjct: 1429 LISTPVVKLICGSNHSAALTVSGGVFLWGDNRRAQCGFGHVTTKISYPTLNEFMGRYAVS 1488

Query: 396  RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALV 454
              ACG  HT   V+            SG ++T G  + G+LG G + A    P  +  L+
Sbjct: 1489 HVACGTDHTVFQVQ------------SGHIYTVGSNEYGQLGRGARGAVYSRPAPIMQLM 1536

Query: 455  EPNFCQVSCGHSLTVALTT-TGHVYTMGSPVYGQLGD 490
                 QV CG   T  L   TG + T G  + GQLG+
Sbjct: 1537 TVVVQQVVCGRYHTTLLAKYTGDLITFGQGLMGQLGN 1573



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 23/242 (9%)

Query: 342  VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
            ++S+SCG  H+  ++S G L+ +GD + G LG      +  P  +    G   V+AACG 
Sbjct: 1329 ITSISCGVKHSLALSSDGSLYAWGDNSEGQLGLKTLQPICKPSILSLPFGRPVVQAACGD 1388

Query: 402  WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR-LVPTCVAALVEPNFCQ 460
             HT A+ +             G++F+WG     +LGH    +R L PT +  L+     +
Sbjct: 1389 HHTLALTQ------------DGRVFSWGKNTTSQLGHSKGLSRVLAPTQITHLISTPVVK 1436

Query: 461  VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF-----VEEIAC 515
            + CG + + ALT +G V+  G     Q G     G + T++       F     V  +AC
Sbjct: 1437 LICGSNHSAALTVSGGVFLWGDNRRAQCG----FGHVTTKISYPTLNEFMGRYAVSHVAC 1492

Query: 516  GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G  H         +YT G    G+LG G      + P+ +  L    V+ +VCG   T  
Sbjct: 1493 GTDHTVFQVQSGHIYTVGSNEYGQLGRGARGAVYSRPAPIMQLMTVVVQQVVCGRYHTTL 1552

Query: 575  IC 576
            + 
Sbjct: 1553 LA 1554



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 86/192 (44%), Gaps = 13/192 (6%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G VF WG+ T   +        G   G+      P  +   +   V  + CG  H+A +T
Sbjct: 1398 GRVFSWGKNTTSQL--------GHSKGLSR-VLAPTQITHLISTPVVKLICGSNHSAALT 1448

Query: 250  KQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
              G VF WG+    + G G V + +S+P L + +    V  VACG  HT     SG +YT
Sbjct: 1449 VSGGVFLWGDNRRAQCGFGHVTTKISYPTLNEFMGRYAVSHVACGTDHTVFQVQSGHIYT 1508

Query: 309  WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS-AGQLFTFGDG 367
             G +   +G LG G   +++        L  + V  V CG +HT ++    G L TFG G
Sbjct: 1509 VGSNE--YGQLGRGARGAVYSRPAPIMQLMTVVVQQVVCGRYHTTLLAKYTGDLITFGQG 1566

Query: 368  TFGVLGHGDRIS 379
              G LG+G   S
Sbjct: 1567 LMGQLGNGTTFS 1578



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 24/173 (13%)

Query: 425  LFTWGDGDRGRLG----------------HGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
            +F WG+   G LG                 GDK+ + +   +    +     +SCG   +
Sbjct: 1281 MFCWGEAHDGALGLDVKEKCVMEARPNTAFGDKKIKYI-AHIDTFDDTIITSISCGVKHS 1339

Query: 469  VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF---VEEIACGDYHVAVLTS 525
            +AL++ G +Y  G    GQLG        P      L+  F   V + ACGD+H   LT 
Sbjct: 1340 LALSSDGSLYAWGDNSEGQLG---LKTLQPICKPSILSLPFGRPVVQAACGDHHTLALTQ 1396

Query: 526  RTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAICL 577
               V++WGK    +LGH     R   P+ +  L    V  ++CG++ +AA+ +
Sbjct: 1397 DGRVFSWGKNTTSQLGHSKGLSRVLAPTQITHLISTPVVKLICGSNHSAALTV 1449


>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
          Length = 681

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 164/339 (48%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  + +  P  I ALK   V+L ACG +HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T +G +Y  GG+N     LG  ++   +       P + I    +S G   +A +T 
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 195

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  D+ +V  P EV   K +  +  +CG +H+A V          
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 244

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                G+L+T+G+ + G+LG  ++       P  V  + E    QV+CG   TV LT   
Sbjct: 245 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK- 299

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VY  G   +GQLG       L    E K+ +   ++    I+CG+ H A++T    +YT
Sbjct: 300 VVYAFGLGQFGQLG---LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYT 356

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 157/335 (46%), Gaps = 35/335 (10%)

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           +LV   G VF++G+    +    + S           KN     ++CG+ HT  VT +  
Sbjct: 44  SLVPDTGAVFTFGKT---KFAENIPSKF-------WFKNDIPICLSCGDEHTAIVTGNNK 93

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG  HT V T  G ++  G
Sbjct: 94  LYMFGSNN--WGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGRNHTLVSTDTGGVYAAG 150

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGSSSSSNCSSGK 424
               G LG GD     T  ++       T++  + G   +AA+ E             GK
Sbjct: 151 GNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE------------DGK 198

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           LF WGD   G++G  DK    +P  V   V      +SCG+  +  +T  G +YT G P 
Sbjct: 199 LFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSAFVTMDGELYTFGEPE 256

Query: 485 YGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            G+LG P     N + P RV G   +  V ++ACG  H  VLT +  VY +G G  G+LG
Sbjct: 257 NGKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTEKV-VYAFGLGQFGQLG 313

Query: 542 HGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G    + + P ++E +KD+++  I CG + TA +
Sbjct: 314 LGTFLFETSEPKIIERIKDQKICHISCGENHTALM 348



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 152/322 (47%), Gaps = 37/322 (11%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDV 273
           G K     P  +++     V+  ACG  H  + T  G V++ G    G+LG G   D D 
Sbjct: 108 GSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT 167

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            H +++       ++ ++ G + + A+T  G ++ WG ++   G +G  ++ ++ +P ++
Sbjct: 168 FH-QIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEV 224

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKG 391
                G  +S +SCG +H+A VT  G+L+TFG+   G LG  + + ++  +P+ V  +  
Sbjct: 225 T---VGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE 281

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCV 450
            R ++ ACG  HT  + E +V             + +G G  G+LG G        P  +
Sbjct: 282 -RVIQVACGGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKII 327

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTK 507
             + +   C +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L  
Sbjct: 328 ERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPT-----LCS 382

Query: 508 NF----VEEIACGDYHVAVLTS 525
           NF    V+ IACG  H+ V  +
Sbjct: 383 NFLRFAVQLIACGGCHMLVFAT 404



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 36/264 (13%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTGHLKGLSGDTFR--VSLSSAVSS 176
           P KV L   +ACG  ++L S          G ++G+ G       DTF   V  + A + 
Sbjct: 124 PEKVKL---AACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI 180

Query: 177 SSQGSGHDDGDSL---GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
               +G +   +L   G +F+WG+             S    G++  S V    E  V  
Sbjct: 181 KQLSAGANTSAALTEDGKLFMWGD------------NSEGQIGLEDKSNVCIPHEVTVGK 228

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVA 291
            +  I+CG  H+A VT  GE++++GE   G+LG   +  ++H  P+ +  +    ++ VA
Sbjct: 229 PISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VA 287

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           CG  HT  +T    +Y +G     FG LG G  +      K+   ++   +  +SCG  H
Sbjct: 288 CGGGHTVVLT-EKVVYAFGLG--QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENH 344

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG 375
           TA++T  G L+TFGDG  G LG G
Sbjct: 345 TALMTELGLLYTFGDGRHGKLGLG 368


>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
 gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
          Length = 646

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 168/340 (49%), Gaps = 29/340 (8%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +++CG  H+A+VT   +++ +G    G+LG G  S +S P  + ALK   V+L ACG +H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G++Y  GG+  N G LG G+         ++       +  +S G   +A +T
Sbjct: 99  TLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-------- 206

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
               + G+L+ +G+ + G+LG  ++       P  V+ + E    QV+CG   TV LT  
Sbjct: 207 ----TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTEN 261

Query: 475 GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVLTSRTEVY 530
             VYT G   +GQLG       L    E K+ +N     +  I+CG+ H A++T    +Y
Sbjct: 262 A-VYTFGLGQFGQLG---LGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMY 317

Query: 531 TWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           T+G G +G+LG G  +  N   P+L        VK + CG
Sbjct: 318 TFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 150/309 (48%), Gaps = 27/309 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + +   +I    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G ++ WG +  + G +G  N  ++ +P+++     G  V
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDN--SEGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+ FG+   G LG  +++  +  TP+ V  +   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  +  + +    
Sbjct: 252 GEHTVVLTENAV-------------YTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            +SCG + T  +T  G +YT G   +G+LG   +   N  +PT     L +  V+ +ACG
Sbjct: 299 YISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL-RFIVKLVACG 357

Query: 517 DYHVAVLTS 525
             H+ V  +
Sbjct: 358 GCHMVVFAA 366



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 46/269 (17%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTG----------HLKGLSGDTFRV 168
           P KV L   +ACG  ++L S          G ++G+ G          H+        ++
Sbjct: 86  PEKVKL---AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI 142

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
              SA S++S     D     G +F+WG+             S    G+K  S V    +
Sbjct: 143 KQLSAGSNTSAALTED-----GRLFMWGD------------NSEGQIGLKNVSNVCVPQQ 185

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNIN 286
             +   V  I+CG  H+A VT  GE++ +GE   G+LG  + +  +   P+L+  +    
Sbjct: 186 VTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           ++ VACG  HT  +T +  +YT+G     FG LG G  +      K+   +    +S +S
Sbjct: 246 IQ-VACGGEHTVVLTENA-VYTFGLG--QFGQLGLGTFLFETSEPKVIENIRDQTISYIS 301

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           CG  HTA++T  G ++TFGDG  G LG G
Sbjct: 302 CGENHTALITDIGLMYTFGDGRHGKLGLG 330



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G     + P+ V+ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99


>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
          Length = 1152

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 169/340 (49%), Gaps = 29/340 (8%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +++CG  H+A+VT   +++ +G    G+LG G  S +S P  + ALK   V+L ACG +H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G++Y  GG+  N G LG G+         ++       +  +S G   +A +T
Sbjct: 99  TLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-------- 206

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
               + G+L+ +G+ + G+LG  ++       P  V+ + E    QV+CG   TV LT  
Sbjct: 207 ----TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTEN 261

Query: 475 GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVY 530
             VYT G   +GQLG       L    E K+ +N  ++    I+CG+ H A++T    +Y
Sbjct: 262 A-VYTFGLGQFGQLG---LGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMY 317

Query: 531 TWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           T+G G +G+LG G  +  N   P+L        VK + CG
Sbjct: 318 TFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 35/313 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + +   +I    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G ++ WG  + + G +G  N  ++ +P+++     G  V
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWG--DNSEGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+ FG+   G LG  +++  +  TP+ V  +   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  +  + +    
Sbjct: 252 GEHTVVLTENAV-------------YTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF----VEE 512
            +SCG + T  +T  G +YT G   +G+LG   +   N  +PT     L  NF    V+ 
Sbjct: 299 YISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPT-----LCSNFLRFIVKL 353

Query: 513 IACGDYHVAVLTS 525
           +ACG  H+ V  +
Sbjct: 354 VACGGCHMVVFAA 366



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 46/269 (17%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTG----------HLKGLSGDTFRV 168
           P KV L   +ACG  ++L S          G ++G+ G          H+        ++
Sbjct: 86  PEKVKL---AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI 142

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
              SA S++S     D     G +F+WG+             S    G+K  S V    +
Sbjct: 143 KQLSAGSNTSAALTED-----GRLFMWGD------------NSEGQIGLKNVSNVCVPQQ 185

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNIN 286
             +   V  I+CG  H+A VT  GE++ +GE   G+LG  + +  +   P+L+  +    
Sbjct: 186 VTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           ++ VACG  HT  +T +  +YT+G     FG LG G  +      K+   +    +S +S
Sbjct: 246 IQ-VACGGEHTVVLTENA-VYTFGLG--QFGQLGLGTFLFETSEPKVIENIRDQTISYIS 301

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           CG  HTA++T  G ++TFGDG  G LG G
Sbjct: 302 CGENHTALITDIGLMYTFGDGRHGKLGLG 330



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G     + P+ V+ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99


>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
          Length = 376

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 162/356 (45%), Gaps = 48/356 (13%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GD++IWG+  G G LG G   S          FVP          ++ IA GG H+  +T
Sbjct: 50  GDLWIWGKGDG-GRLGFGQENS---------VFVPNLNPLFEEHSIRCIALGGLHSVALT 99

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            QG+VF+WG    G LGH V +    P+ +D   +  +  +A    HT A+T SG++Y W
Sbjct: 100 HQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMW 159

Query: 310 GGSNCN-------FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           G    +             G  +S  +P K+      + V+SVSCG + T  +T  GQL+
Sbjct: 160 GREEGDGRLGLGPGRGPNEGGGLS--VPSKVKALT--VPVASVSCGGFFTMALTKEGQLW 215

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
            +G  +   LG GD +    P  V SL+G+R  + ACG +H+ A+ E             
Sbjct: 216 NWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE------------E 263

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           GK+ +WG G  G+LG      + VPT + AL +     ++ G S + A+T  G ++  G+
Sbjct: 264 GKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGN 323

Query: 483 PVYGQLGDPKANGKLPTRVEGKLTKNFVEE-----------IACGDYHVAVLTSRT 527
               QLG P     LP      +  NF+ E           I+ G  H   L SR+
Sbjct: 324 AKDFQLGVP----GLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSRS 375



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 143/307 (46%), Gaps = 24/307 (7%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P  IDA  +     ++CG  H+  +T+ GD++ WG  +   G LG G E S+++P  LN 
Sbjct: 23  PGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKGDG--GRLGFGQENSVFVPN-LNP 78

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
             E   +  ++ G  H+  +T  G +FT+G G FG LGH        PR VD     +  
Sbjct: 79  LFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKIS 138

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG--DGDRGRLGH-----GDKEARLVPT 448
             A    HTAA+ E            SG+L+ WG  +GD            +     VP+
Sbjct: 139 AIATSGTHTAAITE------------SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPS 186

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN 508
            V AL  P    VSCG   T+ALT  G ++  G+    +LG     G         L   
Sbjct: 187 KVKALTVP-VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGV 245

Query: 509 FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
            + +IACG YH   LT   +V +WG G +G+LG     ++  P+ +EAL DK++  I  G
Sbjct: 246 RITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASG 305

Query: 569 TSFTAAI 575
            S +AAI
Sbjct: 306 GSSSAAI 312



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 167/355 (47%), Gaps = 35/355 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+CG  H+ L T  G+++ WG+  GGRLG G ++ V  P L    +  ++  +A G  H+
Sbjct: 37  ISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 95

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+T  GD++TWG     FG LGH       +P++++   +   +S+++    HTA +T 
Sbjct: 96  VALTHQGDVFTWG--YGGFGALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITE 152

Query: 358 AGQLFTFG-------DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +G+L+ +G        G     G  +   +S P +V +L  +     +CG + T A+ + 
Sbjct: 153 SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK- 210

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                       G+L+ WG      LG GD      P  V +L      Q++CG   ++A
Sbjct: 211 -----------EGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLA 259

Query: 471 LTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           LT  G V + G   +GQLG     N K+PT +E    K  V  IA G    A +T   E+
Sbjct: 260 LTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIV-FIASGGSSSAAITDGGEL 318

Query: 530 YTWGKGANGRLG-HGDTDDRNFPSLVEALKDK------QVKSIVCGTSFTAAICL 577
           + WG   + +LG  G  + +  P  V  L ++      +V SI  G S   A+CL
Sbjct: 319 WMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASH--ALCL 371



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 23/202 (11%)

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
           TP  +D+      +  +CG++H+   ++             G L+ WG GD GRLG G +
Sbjct: 22  TPGRIDADSSSFRIGISCGLFHSGLTID-------------GDLWIWGKGDGGRLGFGQE 68

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTR 500
            +  VP       E +   ++ G   +VALT  G V+T G   +G LG      +L P R
Sbjct: 69  NSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRR 128

Query: 501 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK-------GANGRLGHGDTDDRNFPSL 553
           V+       +  IA    H A +T   E+Y WG+       G     G  +    + PS 
Sbjct: 129 VDDSWDCK-ISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSK 187

Query: 554 VEALKDKQVKSIVCGTSFTAAI 575
           V+AL    V S+ CG  FT A+
Sbjct: 188 VKALT-VPVASVSCGGFFTMAL 208


>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 169/340 (49%), Gaps = 29/340 (8%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +++CG  H+A+VT   +++ +G    G+LG G  S +S P  + ALK   V+L ACG +H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G++Y  GG+  N G LG G+         ++       +  +S G   +A +T
Sbjct: 99  TLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-------- 206

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
               + G+L+ +G+ + G+LG  ++       P  V+ + E    QV+CG   TV LT  
Sbjct: 207 ----TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTEN 261

Query: 475 GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVY 530
             VYT G   +GQLG       L    E K+ +N  ++    I+CG+ H A++T    +Y
Sbjct: 262 A-VYTFGLGQFGQLG---LGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMY 317

Query: 531 TWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           T+G G +G+LG G  +  N   P+L        VK + CG
Sbjct: 318 TFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 35/313 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + +   +I    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G ++ WG  + + G +G  N  ++ +P+++     G  V
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWG--DNSEGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+ FG+   G LG  +++  +  TP+ V  +   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  +  + +    
Sbjct: 252 GEHTVVLTENAV-------------YTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF----VEE 512
            +SCG + T  +T  G +YT G   +G+LG   +   N  +PT     L  NF    V+ 
Sbjct: 299 YISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPT-----LCSNFLRFIVKL 353

Query: 513 IACGDYHVAVLTS 525
           +ACG  H+ V  +
Sbjct: 354 VACGGCHMVVFAA 366



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 46/269 (17%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTG----------HLKGLSGDTFRV 168
           P KV L   +ACG  ++L S          G ++G+ G          H+        ++
Sbjct: 86  PEKVKL---AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI 142

Query: 169 SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
              SA S++S     D     G +F+WG+             S    G+K  S V    +
Sbjct: 143 KQLSAGSNTSAALTED-----GRLFMWGD------------NSEGQIGLKNVSNVCVPQQ 185

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNIN 286
             +   V  I+CG  H+A VT  GE++ +GE   G+LG  + +  +   P+L+  +    
Sbjct: 186 VTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           ++ VACG  HT  +T +  +YT+G     FG LG G  +      K+   +    +S +S
Sbjct: 246 IQ-VACGGEHTVVLTENA-VYTFGLG--QFGQLGLGTFLFETSEPKVIENIRDQTISYIS 301

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
           CG  HTA++T  G ++TFGDG  G LG G
Sbjct: 302 CGENHTALITDIGLMYTFGDGRHGKLGLG 330



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G     + P+ V+ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99


>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
           familiaris]
 gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 1003

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 164/341 (48%), Gaps = 33/341 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  S VS P  + ALK   V+  ACG +HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G +Y  GG+N   G LG G+         ++       +  +S G   +A +T 
Sbjct: 100 LVSTEGGKVYAAGGNNE--GQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V          
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGD------KEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
              + G+L+T+G+ + G+LG  +      +  + VP     +V     QV+CG   TV L
Sbjct: 207 ---TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVV-----QVACGGGHTVVL 258

Query: 472 TTTGHVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           T    VYT G   +GQ  LG       +P  +E  +    +  IACG+ H A++T    +
Sbjct: 259 TEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLM 316

Query: 530 YTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           YT+G G +G+LG G  +  N   P+L        V+ + CG
Sbjct: 317 YTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 23/291 (7%)

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            ++CG+ HT  VT +  +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG
Sbjct: 39  FLSCGDEHTAVVTGNNKLYMFGSNN--WGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACG 95

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             HT V T  G+++  G    G LG GD    ST   +      R ++      +T+A +
Sbjct: 96  RNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAAL 155

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                         G+LF WGD   G++G  +     VP  V   V      +SCG+  +
Sbjct: 156 -----------TEDGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWISCGYYHS 202

Query: 469 VALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             +TT G +YT G P  G+LG P     N ++P  V G   K  V ++ACG  H  VLT 
Sbjct: 203 AFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK--VVQVACGGGHTVVLTE 260

Query: 526 RTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +  VYT+G G  G+LG G    + + P  +E +KD+++  I CG + TA I
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 35/313 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G+V++ G    G+LG G   + S   LI    
Sbjct: 78  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFT 137

Query: 284 NI-NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +   ++ ++ G + + A+T  G+++ WG ++   G +G  N  ++ +P+++     G  +
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSE--GQIGLENVTNVCVPQQVTV---GKPI 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ GQL+TFG+   G LG  +++ V+   P+ V  + G + V+ ACG
Sbjct: 193 SWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G       VP  +  + +    
Sbjct: 252 GGHTVVLTEKAV-------------YTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF----VEE 512
            ++CG + T  +T  G +YT G   +G+LG   +   N  +PT     L  NF    V+ 
Sbjct: 299 FIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPT-----LCSNFLRFIVQL 353

Query: 513 IACGDYHVAVLTS 525
           ++CG  H  V  +
Sbjct: 354 VSCGGCHTLVFAT 366



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLID 280
           VPKA+E      +  IACG  H AL+T  G ++++G+   G+LG G+++  +   P L  
Sbjct: 285 VPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCS 344

Query: 281 ALKNINVELVACGEHHT 297
                 V+LV+CG  HT
Sbjct: 345 NFLRFIVQLVSCGGCHT 361


>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1055

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 160/343 (46%), Gaps = 50/343 (14%)

Query: 233 LDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLIDALKNINVE 288
           LD Q I   +CG  H+  V +QG+VF+WG   GG+LG G  ++ V  P+LI  L +  + 
Sbjct: 80  LDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIA 139

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSC 347
            V CG  H  A++  G ++TWG +    G LG G  E S   P+ L   L GI ++ ++ 
Sbjct: 140 QVMCGNQHCIALSKDGQLFTWGQNTS--GQLGLGKGEPSKLFPQPLKS-LAGIPLAKITA 196

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  H+  ++ +G +F +G    G LG  D    + P  +  L+  + V  +CG  HTAA+
Sbjct: 197 GGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAAL 256

Query: 408 VEVMVGSSSSS------NCSS------------------------GKLFTWGDGDRGRLG 437
            +V + S+S         CS+                        G LFT+GDG  G+LG
Sbjct: 257 TKVRIRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLG 316

Query: 438 HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPKANGK 496
           HG     L+P  V  L+     Q++CG   T+A   ++G VY  G   +GQLG  + + +
Sbjct: 317 HGSTSNELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLGTGELSAE 376

Query: 497 ---LPTRVEGKLTKNF--------VEEIACGDYHVAVLTSRTE 528
               P ++      N         V +I CG  H  +L S  +
Sbjct: 377 KCLYPVKINLLSGNNHRTDSKKYSVTKITCGGDHSFLLYSNEQ 419



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 168/392 (42%), Gaps = 50/392 (12%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           +  WG+   DG LG  + R+  +     + F  + ++ AV        CGG+H+  +   
Sbjct: 1   MLCWGKAK-DGQLGIEVERNSMFEPRNCNVFSGRGLKEAV--------CGGQHSVFLLHD 51

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           G V++ G    G+LGH  +   + P+L+ AL    + LV+CG+ H+ AV   G ++ WG 
Sbjct: 52  GSVYTCGSNGCGQLGH--NKPGTSPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGA 109

Query: 312 SNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            +   G LG G  E ++ +P +L   L    ++ V CG  H   ++  GQLFT+G  T G
Sbjct: 110 GDG--GQLGLGTTEAAVRIP-RLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSG 166

Query: 371 VLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
            LG G    S   P+ + SL G+   +   G            G  S +   SG +F WG
Sbjct: 167 QLGLGKGEPSKLFPQPLKSLAGIPLAKITAG------------GDHSFALSLSGAVFGWG 214

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
               G+LG  D + R VP  +  L       +SCG   T ALT                 
Sbjct: 215 KNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAALTKV--------------- 259

Query: 490 DPKANGKLPTRVEGKLTKN--FVEEIACG-DYHVAVLTSRTE---VYTWGKGANGRLGHG 543
               +     R  G    N  F + I C     V +L    +   ++T+G G+ G+LGHG
Sbjct: 260 -RIRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHG 318

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            T +   P  V  L   +V  I CG   T A 
Sbjct: 319 STSNELLPRRVLELMGTEVSQITCGRHHTLAF 350



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 149/365 (40%), Gaps = 81/365 (22%)

Query: 141 GSVNSLSSGGSDGRTGHLK-----GLSG--DTFRVSLSSAVSSSSQGSGHDDGDSLGDVF 193
           GSV +  S G  G+ GH K      L G  DT R++L S   + S           G VF
Sbjct: 52  GSVYTCGSNGC-GQLGHNKPGTSPELVGALDTQRITLVSCGQAHSMAVNEQ-----GQVF 105

Query: 194 IWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGE 253
            WG   GDG   G +    + A V+    +P+ ++      +  + CG +H   ++K G+
Sbjct: 106 AWG--AGDG---GQLGLGTTEAAVR----IPRLIKRLCDHRIAQVMCGNQHCIALSKDGQ 156

Query: 254 VFSWGEELGGRLGHGV-DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           +F+WG+   G+LG G  +     P+ + +L  I +  +  G  H+ A++LSG ++ WG +
Sbjct: 157 LFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKN 216

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA-------------- 358
               G LG  +     +P  +   L    V  +SCG  HTA +T                
Sbjct: 217 KA--GQLGLNDIQDRAVPCHIKF-LRSQKVVHISCGDEHTAALTKVRIRSASQCFRTSGG 273

Query: 359 ----------------------------GQLFTFGDGTFGVLGHGDRISVSTPREVDSLK 390
                                       G LFTFGDG++G LGHG   +   PR V  L 
Sbjct: 274 RCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVLELM 333

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR--LVPT 448
           G    +  CG  HT A              SSG ++ +G    G+LG G+  A   L P 
Sbjct: 334 GTEVSQITCGRHHTLAFAP-----------SSGVVYAFGGNSHGQLGTGELSAEKCLYPV 382

Query: 449 CVAAL 453
            +  L
Sbjct: 383 KINLL 387


>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
          Length = 1365

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 168/378 (44%), Gaps = 75/378 (19%)

Query: 253 EVFSWGEELGGRLGHGVDSDV--SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           E+FSWG +  G+LG G  S +  S+P       NI ++ V+CG+ H   +T +G+M    
Sbjct: 83  EIFSWGSDQAGQLGLG-QSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFIT-TGNMVYSM 140

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPL--EGIHVS---SVSCGPWHTAVVTSAGQLFTFG 365
           GSN N G LG G +MSL   K  N P+  E +      S++CG  HT V T  G ++++G
Sbjct: 141 GSNTN-GQLGVG-DMSL---KMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWG 195

Query: 366 DGTFGVLGHGDRISVSTPREV----DSLKGL-RTVRAACGVWHTAAVVEVMVGSSSSSNC 420
            G FG LG G+      P+ +    D L    + ++ + G+  +A + +           
Sbjct: 196 QGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQ----------- 244

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            SG+++T G  D G+LG G ++   +P  +    E     ++CG    + LT  G VY+ 
Sbjct: 245 -SGRVYTCGQNDAGQLGIGGRDQENIPISIKKFPE-RVSMIACGQMHLLMLTKQGTVYSC 302

Query: 481 GSPVYGQLG-DPKANGKLPTRVEG------------------------------------ 503
           G+  +GQLG + K N   P  ++                                     
Sbjct: 303 GANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLWGSGVFGEF 362

Query: 504 ------KLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
                 K  K     ++ G++    +     VY+WG   +G LG GD D+R  P ++  L
Sbjct: 363 LTPHRVKTIKGMTVSVSIGNHFGIAVNQDGIVYSWGHNNSGELGQGDFDERPTPQIINQL 422

Query: 558 KDKQVKSIVCGTSFTAAI 575
            DK V  + CG +F+ A+
Sbjct: 423 NDKIVTLVSCGRNFSIAL 440



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 42/291 (14%)

Query: 190 GDVFIWGECTGDGILGG-GIHRSGSYAGVKMDSFVPKAV-----ESAVVLDVQNIACGGR 243
           GDV+ WG+    GI G  G       AG   D F+PK +     + +    +  ++ G R
Sbjct: 189 GDVYSWGQ----GIFGALG-------AGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMR 237

Query: 244 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
            +A++ + G V++ G+   G+LG G     + P  I       V ++ACG+ H   +T  
Sbjct: 238 FSAILDQSGRVYTCGQNDAGQLGIGGRDQENIPISIKKFPE-RVSMIACGQMHLLMLTKQ 296

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           G +Y+ G ++  FG LG  N+ +   P  L   +  I +  V+ G +  ++   +G L+ 
Sbjct: 297 GTVYSCGANS--FGQLGLNNKRNSSSPL-LIQDISHIPMRYVAAGSFSASISYDSGDLYL 353

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           +G G FG           TP  V ++KG+ TV  + G     AV +             G
Sbjct: 354 WGSGVFG--------EFLTPHRVKTIKGM-TVSVSIGNHFGIAVNQ------------DG 392

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
            +++WG  + G LG GD + R  P  +  L +     VSCG + ++AL  T
Sbjct: 393 IVYSWGHNNSGELGQGDFDERPTPQIINQLNDKIVTLVSCGRNFSIALGQT 443


>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
 gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
          Length = 753

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 140/269 (52%), Gaps = 27/269 (10%)

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-----SVSTPREVDSLKGLRTVRAAC 399
           +SCG  HTAVV+++G ++T+G    G LGHGD I     S+    E+  +  ++ +  AC
Sbjct: 35  LSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSVAC 94

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           G+ HT A+            C  G +++WG  + G+LG GD +    P  V  L +    
Sbjct: 95  GIEHTLAL------------CRDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCI 141

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDY 518
            V CGH  ++AL+    VY+ G  V+GQLG D   +  LP+ V   L+  FV ++A G  
Sbjct: 142 AVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTS-LSGAFVTQLAAGYS 200

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
           H AVLT+  +VYT+G G  G+LG G T  +  P LV+AL+  ++  I CG+  T A+   
Sbjct: 201 HTAVLTTEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAV--- 257

Query: 579 KWVSGVDQSMCSGCRIPFNFKRKRHNCYN 607
                 +Q + +  R P  F+    +C N
Sbjct: 258 ----SSEQKLFNWGRSPHYFRFHMIHCGN 282



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 161/345 (46%), Gaps = 45/345 (13%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHG---VDSDVSHPKLIDAL--KNINVELVAC 292
           ++CG  H A+V+  G+V++WG+   GRLGHG    +   S P  ++ L    I V  VAC
Sbjct: 35  LSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSVAC 94

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G  HT A+   G +Y+WG S   +G LG G+      P  +   L      +V CG +H+
Sbjct: 95  GIEHTLALCRDG-VYSWGSS--EYGQLGQGDTQQHTRPVYVT-ELSDKKCIAVVCGHYHS 150

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             +++  Q++++G G  G LG         P  V SL G    + A G  HTA +     
Sbjct: 151 LALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAVLT---- 206

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   + GK++T+G G  G+LG G    + +P  V AL +     + CG   TVA++
Sbjct: 207 --------TEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVS 258

Query: 473 TTGHVYTMG-SPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
           +   ++  G SP Y +                         I CG++H   +T   +V+T
Sbjct: 259 SEQKLFNWGRSPHYFRF----------------------HMIHCGNWHYLAVTEARQVFT 296

Query: 532 WGKGANGRLGHGDT-DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           WG   +G+LGH  + D   FP++V+ L +  V +   G  F+ A+
Sbjct: 297 WGFNDHGQLGHSTSMDHLLFPTVVQKLNESFVATASVGAEFSVAM 341



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 164/363 (45%), Gaps = 51/363 (14%)

Query: 190 GDVFIWGECTGDGILGGG--IHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           GDV+ WG+ +  G LG G  I   G     +++      ++      V ++ACG  H   
Sbjct: 49  GDVYTWGK-SHKGRLGHGDLIEEEGKSMPFRVEILHMHRIK------VLSVACGIEHTLA 101

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           + + G V+SWG    G+LG G     + P  +  L +     V CG +H+ A++    +Y
Sbjct: 102 LCRDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSADQQVY 160

Query: 308 TWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           +WG G +   GL    + +   LP  +   L G  V+ ++ G  HTAV+T+ G+++TFG 
Sbjct: 161 SWGWGVHGQLGLDSIEDAL---LPSHVTS-LSGAFVTQLAAGYSHTAVLTTEGKVYTFGG 216

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
           G +G LG G     + P+ V +L+  R     CG + T AV             S  KLF
Sbjct: 217 GLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAV------------SSEQKLF 264

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
            W     GR  H  +                F  + CG+   +A+T    V+T G   +G
Sbjct: 265 NW-----GRSPHYFR----------------FHMIHCGNWHYLAVTEARQVFTWGFNDHG 303

Query: 487 QLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           QLG   +   L  PT V+ KL ++FV   + G      + +  +V+ WG+  +G+  H  
Sbjct: 304 QLGHSTSMDHLLFPTVVQ-KLNESFVATASVGAEFSVAMDATGQVWVWGRSDSGQSLHSS 362

Query: 545 TDD 547
           +++
Sbjct: 363 SEE 365



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 10/140 (7%)

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD---PKANGK-LPTRVE-GKLTKN 508
           V+    ++SCG   T  ++ +G VYT G    G+LG     +  GK +P RVE   + + 
Sbjct: 28  VQSQRVRLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRI 87

Query: 509 FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
            V  +ACG  H   L  R  VY+WG    G+LG GDT     P  V  L DK+  ++VCG
Sbjct: 88  KVLSVACGIEHTLAL-CRDGVYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCG 146

Query: 569 TSFTAAIC----LHKWVSGV 584
              + A+     ++ W  GV
Sbjct: 147 HYHSLALSADQQVYSWGWGV 166


>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
          Length = 1386

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 157/354 (44%), Gaps = 74/354 (20%)

Query: 253  EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
            +VF WG    GR G+G +S    P    A  + N   ++CG HH+ AVT  G + +WG  
Sbjct: 936  KVFVWGSGKDGRCGNGKESSEKLPN--QANTSHNFTQLSCGYHHSAAVTSDGMILSWGRG 993

Query: 313  NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
               FG LGHG+  +  LP  +   L  I +  VSCG  H+  ++S G++F++G G  G L
Sbjct: 994  --IFGQLGHGDTENYSLPTPIEA-LVKIQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQL 1050

Query: 373  GHGDRISVSTPREVDSLK--GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            GHGD      P+E+D  +   +     ACG  H+  + +   G SS       +L+ WG 
Sbjct: 1051 GHGDTNDYLLPKEIDFFRKNSINVGMIACGHSHSGCITD---GQSS-------QLYLWGC 1100

Query: 431  GDRGRLGHGDKEARLVPTCVAAL-----------------VEPNFCQVSCGHSLTVALTT 473
                RL   + E +L+PT                      +EP  C +S G + T  +T 
Sbjct: 1101 NPDCRLMIEENENQLLPTLTILEQAKMKNYERGDQLKLEGLEP--CYLSLGVTHTAIVTR 1158

Query: 474  TGHVYTMGSPVYGQLG-----------------------------------DPKA--NGK 496
            +G +YT GS + GQLG                                   D K   +  
Sbjct: 1159 SGELYTGGSMLDGQLGVNYEAAKNDQSYPSSLSNTHQLINESNSSFINQFKDQKELKSQS 1218

Query: 497  LPT-RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
            LP  RV+    +N   +++CGD    VL  R EVY +GK ++GRLG G+  + N
Sbjct: 1219 LPIYRVDFFSAQNKATQVSCGDAFTIVLNERNEVYAFGKLSHGRLGVGNGQNLN 1272



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 175/417 (41%), Gaps = 96/417 (23%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G +  WG     GI G   H      G   +  +P  +E+ V + +  ++CG +H+  ++
Sbjct: 985  GMILSWGR----GIFGQLGH------GDTENYSLPTPIEALVKIQIIQVSCGWQHSMALS 1034

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK--NINVELVACGEHHTCAVT--LSGD 305
             QG +FSWG    G+LGHG  +D   PK ID  +  +INV ++ACG  H+  +T   S  
Sbjct: 1035 SQGRIFSWGYGEDGQLGHGDTNDYLLPKEIDFFRKNSINVGMIACGHSHSGCITDGQSSQ 1094

Query: 306  MYTWG-GSNCNFGLLGHGNEM----SLWLPKKLNG-------PLEGIHVSSVSCGPWHTA 353
            +Y WG   +C   +  + N++    ++    K+          LEG+    +S G  HTA
Sbjct: 1095 LYLWGCNPDCRLMIEENENQLLPTLTILEQAKMKNYERGDQLKLEGLEPCYLSLGVTHTA 1154

Query: 354  VVTSAGQLFTFG---DGTFGVLGHGDRISVSTPRE---------------VDSLKGLRTV 395
            +VT +G+L+T G   DG  GV     +   S P                 ++  K  + +
Sbjct: 1155 IVTRSGELYTGGSMLDGQLGVNYEAAKNDQSYPSSLSNTHQLINESNSSFINQFKDQKEL 1214

Query: 396  RA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLFT-----------WGDGDRGRLGHGD--- 440
            ++ +  ++     V+     + ++  S G  FT           +G    GRLG G+   
Sbjct: 1215 KSQSLPIYR----VDFFSAQNKATQVSCGDAFTIVLNERNEVYAFGKLSHGRLGVGNGQN 1270

Query: 441  ----KEARLVPT--------------CVAALVEPNF----------CQVSCGHSLTVALT 472
                K  +L  +              C+A   EP             Q+S G      +T
Sbjct: 1271 LNQQKTNQLKQSIQNQTYQSTEGSNDCIA---EPQLLQSLSQSEKVVQISAGCRHAACVT 1327

Query: 473  TTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
             +G +Y  G   Y QLG  D + +  +PT+V   L  + V+ ++CG +H   L  +T
Sbjct: 1328 DSGKLYAWGFNFYEQLGLGDSEKDFDVPTKVSKGLQSSKVKFVSCGYFHTGALVQQT 1384



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 87/157 (55%), Gaps = 6/157 (3%)

Query: 422  SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            S K+F WG G  GR G+G + +  +P    A    NF Q+SCG+  + A+T+ G + + G
Sbjct: 934  SYKVFVWGSGKDGRCGNGKESSEKLPN--QANTSHNFTQLSCGYHHSAAVTSDGMILSWG 991

Query: 482  SPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
              ++GQLG     N  LPT +E  L K  + +++CG  H   L+S+  +++WG G +G+L
Sbjct: 992  RGIFGQLGHGDTENYSLPTPIEA-LVKIQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQL 1050

Query: 541  GHGDTDDRNFPSLVEALKDKQVK--SIVCGTSFTAAI 575
            GHGDT+D   P  ++  +   +    I CG S +  I
Sbjct: 1051 GHGDTNDYLLPKEIDFFRKNSINVGMIACGHSHSGCI 1087



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 12/146 (8%)

Query: 477  VYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            V+  GS   G+ G+ K ++ KLP   +   + NF + ++CG +H A +TS   + +WG+G
Sbjct: 937  VFVWGSGKDGRCGNGKESSEKLPN--QANTSHNFTQ-LSCGYHHSAAVTSDGMILSWGRG 993

Query: 536  ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 591
              G+LGHGDT++ + P+ +EAL   Q+  + CG   + A+     +  W  G D  +  G
Sbjct: 994  IFGQLGHGDTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQLGHG 1053

Query: 592  ----CRIPFNFKRKRHNCYNCGLVYC 613
                  +P      R N  N G++ C
Sbjct: 1054 DTNDYLLPKEIDFFRKNSINVGMIAC 1079



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 139/371 (37%), Gaps = 110/371 (29%)

Query: 188  SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE--SAVVLDVQNIACGGRHA 245
            S G +F WG    DG LG G            D  +PK ++      ++V  IACG  H+
Sbjct: 1035 SQGRIFSWG-YGEDGQLGHGDTN---------DYLLPKEIDFFRKNSINVGMIACGHSHS 1084

Query: 246  ALVT--KQGEVFSWGEELGGRLGHGVDSDVSHPKLI-------------DALKNINVE-- 288
              +T  +  +++ WG     RL    + +   P L              D LK   +E  
Sbjct: 1085 GCITDGQSSQLYLWGCNPDCRLMIEENENQLLPTLTILEQAKMKNYERGDQLKLEGLEPC 1144

Query: 289  LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS---LWLPKKLNGPLEGIHVSS- 344
             ++ G  HT  VT SG++YT GGS  + G LG   E +      P  L+   + I+ S+ 
Sbjct: 1145 YLSLGVTHTAIVTRSGELYT-GGSMLD-GQLGVNYEAAKNDQSYPSSLSNTHQLINESNS 1202

Query: 345  ---------------------------------VSCGPWHTAVVTSAGQLFTFGDGTFGV 371
                                             VSCG   T V+    +++ FG  + G 
Sbjct: 1203 SFINQFKDQKELKSQSLPIYRVDFFSAQNKATQVSCGDAFTIVLNERNEVYAFGKLSHGR 1262

Query: 372  LG---------------------------HGDRISVSTPREVDSL-KGLRTVRAACGVWH 403
            LG                            G    ++ P+ + SL +  + V+ + G  H
Sbjct: 1263 LGVGNGQNLNQQKTNQLKQSIQNQTYQSTEGSNDCIAEPQLLQSLSQSEKVVQISAGCRH 1322

Query: 404  TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQ-V 461
             A V +            SGKL+ WG     +LG GD E    VPT V+  ++ +  + V
Sbjct: 1323 AACVTD------------SGKLYAWGFNFYEQLGLGDSEKDFDVPTKVSKGLQSSKVKFV 1370

Query: 462  SCGHSLTVALT 472
            SCG+  T AL 
Sbjct: 1371 SCGYFHTGALV 1381



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 34/154 (22%)

Query: 238  IACGGRHAALVTKQGEVFSWGEELGGRLG---------------------------HGVD 270
            ++CG     ++ ++ EV+++G+   GRLG                            G +
Sbjct: 1236 VSCGDAFTIVLNERNEVYAFGKLSHGRLGVGNGQNLNQQKTNQLKQSIQNQTYQSTEGSN 1295

Query: 271  SDVSHPKLIDAL-KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF-GLLGHGN-EMSL 327
              ++ P+L+ +L ++  V  ++ G  H   VT SG +Y WG    NF   LG G+ E   
Sbjct: 1296 DCIAEPQLLQSLSQSEKVVQISAGCRHAACVTDSGKLYAWG---FNFYEQLGLGDSEKDF 1352

Query: 328  WLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQ 360
             +P K++  L+   V  VSCG +HT A+V    Q
Sbjct: 1353 DVPTKVSKGLQSSKVKFVSCGYFHTGALVQQTNQ 1386


>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 859

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 195/426 (45%), Gaps = 46/426 (10%)

Query: 166 FRVSLSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHRSGSYA-GVKMDSFV 223
            +VS  +A+++ + G GH     S G ++ WG+           +R G    G+     +
Sbjct: 454 MQVSGLAAITALATGDGHSVAVGSDGGIWAWGD-----------NRRGQLGIGITATREI 502

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++  +  +  +A G  H+  +   G V++WG    G+LG G   D +    +  L 
Sbjct: 503 P--VQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLT 560

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           +I    +A G HH+ A+   G ++ WG SN +FG LG G   S   P +++G L  +   
Sbjct: 561 DITA--LAAGNHHSLALRNDGTVWVWG-SN-DFGQLGDGTVTSRKTPVQVSG-LSAMR-- 613

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
           +V  GP H+  V   G ++ +G+  FG LG G   S + P +V  L G+  V  A GV+H
Sbjct: 614 AVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTGVTAV--AVGVYH 671

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           + A+             + G L+ WG  + G+LG+G    +  P  V  L          
Sbjct: 672 SLAL------------RNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTGVIALAAGN 719

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAV 522
           GHSL  AL T G V+  G+  +GQLGD     +  PT+V G LT   V  +  G ++   
Sbjct: 720 GHSL--ALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPG-LTN--VIALNAGAFYTVA 774

Query: 523 LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK--W 580
           L S   V+ WG  + G+LG G    +  P  V  L D  V ++  G +   A+   +  W
Sbjct: 775 LRSERSVWEWGSKSAGQLGDGTVTQKTTPVQVSGLTD--VTALAAGNAHALALRTDRTVW 832

Query: 581 VSGVDQ 586
             G +Q
Sbjct: 833 AWGGNQ 838



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 162/357 (45%), Gaps = 43/357 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAV--VLDVQNIACGGRHAAL 247
           G V+ WG              S +Y  +   + + +A  + V  + D+  +A G  H+  
Sbjct: 529 GSVWTWG--------------SNAYGQLGDGTAIDRATAAQVPGLTDITALAAGNHHSLA 574

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +   G V+ WG    G+LG G  +    P  +  L  +    V  G  H+ AV L+G ++
Sbjct: 575 LRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRA--VEAGPAHSVAVHLNGTVW 632

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG  N +FG LG G   S  +P +++G L G  V++V+ G +H+  + + G L+ +G  
Sbjct: 633 VWG--NNDFGQLGDGTVTSRAMPVQVSG-LTG--VTAVAVGVYHSLALRNDGTLWAWGYN 687

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G LG+G     STP +V  L G+  + A  G  H+ A+             + G ++ 
Sbjct: 688 NVGQLGNGTSGIQSTPAQVPGLTGVIALAAGNG--HSLAL------------RTDGTVWG 733

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG    G+LG G    R  PT V  L   N   ++ G   TVAL +   V+  GS   GQ
Sbjct: 734 WGANSFGQLGDGTTTPRSTPTQVPGLT--NVIALNAGAFYTVALRSERSVWEWGSKSAGQ 791

Query: 488 LGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           LGD     K  P +V G LT   V  +A G+ H   L +   V+ WG    G++G G
Sbjct: 792 LGDGTVTQKTTPVQVSG-LTD--VTALAAGNAHALALRTDRTVWAWGGNQRGQIGDG 845



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 161/359 (44%), Gaps = 52/359 (14%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++  G H   + + G V++WG    G+LG+G  +D + P  +  L   +V  VA  E H+
Sbjct: 148 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHS 205

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+   G ++ WG  +  +G LG G +     P ++ G L G  V++++ G   T V  S
Sbjct: 206 LALRSDGTVWAWG--DNGYGQLGDGTKAQRTTPVQVLG-LAG--VTALAAGGNGTTVAIS 260

Query: 358 A--------GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVV 408
           A        G ++ +GD + G LG G     +TP +V    GL +V A A G +H+ A+ 
Sbjct: 261 AHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQV---LGLTSVTALAAGAFHSLALR 317

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG---- 464
           +             G ++ WG+   G+LG G   AR  P  V  L   +   V+ G    
Sbjct: 318 D------------DGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLT--SVIAVAAGGGDD 363

Query: 465 -------HSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACG 516
                  HSL  AL + G V+  G  +  Q GD   A    P +V  +LT      +  G
Sbjct: 364 SLGMRGDHSL--ALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVS-ELTGG--TALVAG 418

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           D H  VL S   V+ WG  ++G+LG G T  R  P  V  L    + ++  G   + A+
Sbjct: 419 DLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGL--AAITALATGDGHSVAV 475



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 162/385 (42%), Gaps = 50/385 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR------ 243
           G V+ WG+  G G LG          G K     P  V+   +  V  +A GG       
Sbjct: 212 GTVWAWGD-NGYGQLG---------DGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVAI 259

Query: 244 --HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
             H+  +   G V++WG+   G+LG G  ++ + P  +  L   +V  +A G  H+ A+ 
Sbjct: 260 SAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATP--VQVLGLTSVTALAAGAFHSLALR 317

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS------SVSCGPWHTAVV 355
             G ++ WG  N + G LG G   +   P ++ G    I V+      S+     H+  +
Sbjct: 318 DDGTVWAWG--NNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLAL 375

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            S G ++ +G       G G   + +TP +V  L G   + A  G  H A V++      
Sbjct: 376 KSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALVA--GDLH-AVVLK------ 426

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                S G ++ WGD   G+LG G    R  P  V+ L          GHS  VA+ + G
Sbjct: 427 -----SDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHS--VAVGSDG 479

Query: 476 HVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            ++  G    GQLG    A  ++P +  G  +   +  +A GD H   L     V+TWG 
Sbjct: 480 GIWAWGDNRRGQLGIGITATREIPVQATGLAS---ISALAAGDSHSLALRGNGSVWTWGS 536

Query: 535 GANGRLGHGDTDDRNFPSLVEALKD 559
            A G+LG G   DR   + V  L D
Sbjct: 537 NAYGQLGDGTAIDRATAAQVPGLTD 561



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 23/224 (10%)

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
           V+ + +  V  +A G  H+  +   G +++WG    G+LG+G     S P  +  L    
Sbjct: 654 VQVSGLTGVTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTG-- 711

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           V  +A G  H+ A+   G ++ WG ++  FG LG G       P ++ G     +V +++
Sbjct: 712 VIALAAGNGHSLALRTDGTVWGWGANS--FGQLGDGTTTPRSTPTQVPGL---TNVIALN 766

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            G ++T  + S   ++ +G  + G LG G     +TP +V  L  +  +  A G  H  A
Sbjct: 767 AGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPVQVSGLTDVTAL--AAGNAHALA 824

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
           +             +   ++ WG   RG++  GD  A ++P  V
Sbjct: 825 L------------RTDRTVWAWGGNQRGQI--GDGTASIMPAPV 854


>gi|403355741|gb|EJY77458.1| hypothetical protein OXYTRI_00911 [Oxytricha trifallax]
          Length = 922

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 178/434 (41%), Gaps = 115/434 (26%)

Query: 207 GIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 265
           G ++ G  A GV  D+ +P+ V     +  + I+    H A++T+ G++   G  L G+L
Sbjct: 173 GKNQEGELALGVYKDALLPRFVTGVKGMTAKWISSSNHHTAMITQDGQIVVSGSSLHGKL 232

Query: 266 G-HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 324
           G     ++++  +++  L+    + V+CG++HT  +   G +Y +GG             
Sbjct: 233 GIESNKTNINKFQIVPTLQRKRAKQVSCGDYHTLVLIEDGTVYQFGG------------- 279

Query: 325 MSLWLPK--KLNGP-----------------LEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            SL+  K  K+N P                 L G  +  + CG +H+A +   G L+T+G
Sbjct: 280 -SLFKDKKDKINRPQNPTQQIAPNVPQPVQALYGREIVQIDCGDFHSAALDGNGDLYTWG 338

Query: 366 DG----TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            G      G  GHG   ++  P +V  L   R V+ ACG +HT A+             S
Sbjct: 339 GGAPSYNKGQCGHGHNNALEYPEKVKYLSSKRIVKVACGGFHTLALT------------S 386

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV--------------------------- 454
             +L+ +G G+ G  G+G+     + T    L+                           
Sbjct: 387 ENELYGFGSGNYGECGNGE----FMDTSKPKLIKFPNDHLDTKKNVTDDLEEYGHDEEFV 442

Query: 455 -------EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTK 507
                  +P     + G   ++ +T  G +Y+ G    GQLG+                 
Sbjct: 443 LEMYLKEQPQILDFAAGGRHSLIITNKGRLYSFGYGTNGQLGN----------------- 485

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V + A G  H  +LT R +V++ G G +G+LGHGD D R   + V++L +K +  I  
Sbjct: 486 --VVQCAAGWNHSMILTERGDVFSCGYGGHGQLGHGDKDSRTQFTFVQSLGNKNISKIFA 543

Query: 568 GTSFTAAICLHKWV 581
           G S       H WV
Sbjct: 544 GGS-------HSWV 550



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 129/298 (43%), Gaps = 70/298 (23%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG----EELGGRLGHGVDSDVSHPKL 278
           VP+ V++    ++  I CG  H+A +   G++++WG        G+ GHG ++ + +P+ 
Sbjct: 303 VPQPVQALYGREIVQIDCGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYPEK 362

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           +  L +  +  VACG  HT A+T   ++Y +G  N  +G  G+G  M    PK +  P +
Sbjct: 363 VKYLSSKRIVKVACGGFHTLALTSENELYGFGSGN--YGECGNGEFMDTSKPKLIKFPND 420

Query: 339 GI-----------------------------HVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            +                              +   + G  H+ ++T+ G+L++FG GT 
Sbjct: 421 HLDTKKNVTDDLEEYGHDEEFVLEMYLKEQPQILDFAAGGRHSLIITNKGRLYSFGYGTN 480

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LG+                    V+ A G  H+  + E             G +F+ G
Sbjct: 481 GQLGN-------------------VVQCAAGWNHSMILTE------------RGDVFSCG 509

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV--ALTTTGHVYTMGSP 483
            G  G+LGHGDK++R   T V +L   N  ++  G  HS  V  ++  T   +T  SP
Sbjct: 510 YGGHGQLGHGDKDSRTQFTFVQSLGNKNISKIFAGGSHSWVVLDSVVPTRDKWTAPSP 567



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 14/260 (5%)

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           Y W       G L  G      LP+ + G ++G+    +S    HTA++T  GQ+   G 
Sbjct: 168 YVWAFGKNQEGELALGVYKDALLPRFVTG-VKGMTAKWISSSNHHTAMITQDGQIVVSGS 226

Query: 367 GTFGVLG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
              G LG   ++ +++  + V +L+  R  + +CG +HT  ++E       +     G L
Sbjct: 227 SLHGKLGIESNKTNINKFQIVPTLQRKRAKQVSCGDYHTLVLIE-----DGTVYQFGGSL 281

Query: 426 FTWGDGDRGRLGHGDKE-ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG--S 482
           F        R  +  ++ A  VP  V AL      Q+ CG   + AL   G +YT G  +
Sbjct: 282 FKDKKDKINRPQNPTQQIAPNVPQPVQALYGREIVQIDCGDFHSAALDGNGDLYTWGGGA 341

Query: 483 PVY--GQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           P Y  GQ G    N  + P +V+   +K  V+ +ACG +H   LTS  E+Y +G G  G 
Sbjct: 342 PSYNKGQCGHGHNNALEYPEKVKYLSSKRIVK-VACGGFHTLALTSENELYGFGSGNYGE 400

Query: 540 LGHGDTDDRNFPSLVEALKD 559
            G+G+  D + P L++   D
Sbjct: 401 CGNGEFMDTSKPKLIKFPND 420


>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 683

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 166/341 (48%), Gaps = 33/341 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  S VS P  + ALK   V+  ACG +HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G +Y  GG+  N G LG G+         ++       +  +S G   +A +T 
Sbjct: 100 LVSTEGGKVYAAGGN--NEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V          
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGD------KEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
              + G+L+T+G+ + G+LG  +      +  + VP     +V     QV+CG   TV L
Sbjct: 207 ---TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVV-----QVACGGGHTVVL 258

Query: 472 TTTGHVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           T    VYT G   +GQ  LG       +P  +E  +    +  IACG+ H A++T    +
Sbjct: 259 TEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLM 316

Query: 530 YTWGKGANGRLGHG--DTDDRNFPSLVEALKDKQVKSIVCG 568
           YT+G G +G+LG G  ++ ++  P+L        V+ + CG
Sbjct: 317 YTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 23/291 (7%)

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            ++CG+ HT  VT +  +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG
Sbjct: 39  FLSCGDEHTAVVTGNNKLYMFGSNN--WGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACG 95

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             HT V T  G+++  G    G LG GD    ST   +      R ++      +T+A +
Sbjct: 96  RNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAAL 155

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                         G+LF WGD   G++G  +     VP  V   V      +SCG+  +
Sbjct: 156 -----------TEDGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWISCGYYHS 202

Query: 469 VALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             +TT G +YT G P  G+LG P     N ++P  V G   K  V ++ACG  H  VLT 
Sbjct: 203 AFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK--VVQVACGGGHTVVLTE 260

Query: 526 RTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +  VYT+G G  G+LG G    + + P  +E +KD+++  I CG + TA I
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 128/253 (50%), Gaps = 26/253 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ ++ G   +A +T+ GE+F WG+   G++G    ++V  P+ +   K I+   ++CG 
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPIS--WISCGY 199

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI--HVSSVSCGPWHT 352
           +H+  VT  G +YT+G   C  G LG  N+  L +  ++  P+ GI   V  V+CG  HT
Sbjct: 200 YHSAFVTTEGQLYTFGEPEC--GKLGLPNQ--LLVNHRMPQPVPGIPGKVVQVACGGGHT 255

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            V+T    ++TFG G FG LG G  +   S P+ ++ +K  +    ACG  HTA + ++ 
Sbjct: 256 VVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDM- 313

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCG--HSL 467
                      G ++T+GDG  G+LG G  +   + +PT  +  +      VSCG  H+L
Sbjct: 314 -----------GLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTL 362

Query: 468 TVALTTTGHVYTM 480
             A    G    M
Sbjct: 363 VFATPRLGGTEEM 375



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 153/309 (49%), Gaps = 27/309 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G+V++ G    G+LG G   + S   LI    
Sbjct: 78  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFT 137

Query: 284 NI-NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +   ++ ++ G + + A+T  G+++ WG +  + G +G  N  ++ +P+++     G  +
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDN--SEGQIGLENVTNVCVPQQVT---VGKPI 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ GQL+TFG+   G LG  +++ V+   P+ V  + G + V+ ACG
Sbjct: 193 SWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G       VP  +  + +    
Sbjct: 252 GGHTVVLTEKAV-------------YTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            ++CG + T  +T  G +YT G   +G+LG   +   N  +PT     L +  V+ ++CG
Sbjct: 299 FIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFL-RFIVQLVSCG 357

Query: 517 DYHVAVLTS 525
             H  V  +
Sbjct: 358 GCHTLVFAT 366



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--P 276
            ++ VPKA+E      +  IACG  H AL+T  G ++++G+   G+LG G+++  +   P
Sbjct: 281 FETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIP 340

Query: 277 KLIDALKNINVELVACGEHHT 297
            L        V+LV+CG  HT
Sbjct: 341 TLCSNFLRFIVQLVSCGGCHT 361


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 167/347 (48%), Gaps = 36/347 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RH+ L+     V S G+   G+LG         P+ I AL+ + V+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG GS    G +G   E+S + PKK+   L  I +  VSCG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKIMT-LNDIKIIQVSCGHYHSLALSK 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             Q+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
            S C  G  F WG    G+L    +   +    P  V AL       +SCG + T  LT 
Sbjct: 197 -SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253

Query: 474 TGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTE 528
            G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A + +  +
Sbjct: 254 DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308

Query: 529 VYTWGKGAN--GRLGHGDTDDRNF--PSLV--EALKDKQVKSIVCGT 569
           V ++G G +   +  H +    NF    L+  E   D QVK I  GT
Sbjct: 309 VVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT 355



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 143/301 (47%), Gaps = 39/301 (12%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKG------LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V L S     S    H      G V
Sbjct: 46  SCGD----NSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHK-----GRV 96

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG    +G LG G          K  SF PK + +   + +  ++CG  H+  ++K  
Sbjct: 97  FAWG-AGSEGQLGIG--------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDS 147

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + W G
Sbjct: 148 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW-G 206

Query: 312 SNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           SN    L   G  + +   K L+ G L+ + V  +SCG  HTAV+T  G++FTFGD   G
Sbjct: 207 SNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSG 266

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LG+        P+ V+ + GL + +  CG +HT A V            ++G++ ++G 
Sbjct: 267 QLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVH-----------TTGQVVSFGH 314

Query: 431 G 431
           G
Sbjct: 315 G 315



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L +  
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   + P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  + G+L   G       N P  V ALK+  V  I CG +
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251


>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
           DW4/3-1]
          Length = 860

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 195/426 (45%), Gaps = 46/426 (10%)

Query: 166 FRVSLSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHRSGSYA-GVKMDSFV 223
            +VS  +A+++ + G GH     S G ++ WG+           +R G    G+     +
Sbjct: 455 MQVSGLAAITALATGDGHSVAVGSDGGIWAWGD-----------NRRGQLGIGITATREI 503

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++  +  +  +A G  H+  +   G V++WG    G+LG G   D +    +  L 
Sbjct: 504 P--VQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLT 561

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           +I    +A G HH+ A+   G ++ WG SN +FG LG G   S   P +++G L  +   
Sbjct: 562 DITA--LAAGNHHSLALRNDGTVWVWG-SN-DFGQLGDGTVTSRKTPVQVSG-LSAMR-- 614

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
           +V  GP H+  V   G ++ +G+  FG LG G   S + P +V  L G+  V  A GV+H
Sbjct: 615 AVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTGVTAV--AVGVYH 672

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           + A+             + G L+ WG  + G+LG+G    +  P  V  L          
Sbjct: 673 SLAL------------RNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTGVIALAAGN 720

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAV 522
           GHSL  AL T G V+  G+  +GQLGD     +  PT+V G LT   V  +  G ++   
Sbjct: 721 GHSL--ALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPG-LTN--VIALNAGAFYTVA 775

Query: 523 LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK--W 580
           L S   V+ WG  + G+LG G    +  P  V  L D  V ++  G +   A+   +  W
Sbjct: 776 LRSERSVWEWGSKSAGQLGDGTVTQKTTPVQVSGLTD--VTALAAGNAHALALRTDRTVW 833

Query: 581 VSGVDQ 586
             G +Q
Sbjct: 834 AWGGNQ 839



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 162/357 (45%), Gaps = 43/357 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAV--VLDVQNIACGGRHAAL 247
           G V+ WG              S +Y  +   + + +A  + V  + D+  +A G  H+  
Sbjct: 530 GSVWTWG--------------SNAYGQLGDGTAIDRATAAQVPGLTDITALAAGNHHSLA 575

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +   G V+ WG    G+LG G  +    P  +  L  +    V  G  H+ AV L+G ++
Sbjct: 576 LRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRA--VEAGPAHSVAVHLNGTVW 633

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG  N +FG LG G   S  +P +++G L G  V++V+ G +H+  + + G L+ +G  
Sbjct: 634 VWG--NNDFGQLGDGTVTSRAMPVQVSG-LTG--VTAVAVGVYHSLALRNDGTLWAWGYN 688

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G LG+G     STP +V  L G+  + A  G  H+ A+             + G ++ 
Sbjct: 689 NVGQLGNGTSGIQSTPAQVPGLTGVIALAAGNG--HSLAL------------RTDGTVWG 734

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG    G+LG G    R  PT V  L   N   ++ G   TVAL +   V+  GS   GQ
Sbjct: 735 WGANSFGQLGDGTTTPRSTPTQVPGLT--NVIALNAGAFYTVALRSERSVWEWGSKSAGQ 792

Query: 488 LGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           LGD     K  P +V G LT   V  +A G+ H   L +   V+ WG    G++G G
Sbjct: 793 LGDGTVTQKTTPVQVSG-LTD--VTALAAGNAHALALRTDRTVWAWGGNQRGQIGDG 846



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 161/359 (44%), Gaps = 52/359 (14%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++  G H   + + G V++WG    G+LG+G  +D + P  +  L   +V  VA  E H+
Sbjct: 149 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHS 206

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+   G ++ WG  +  +G LG G +     P ++ G L G  V++++ G   T V  S
Sbjct: 207 LALRSDGTVWAWG--DNGYGQLGDGTKAQRTTPVQVLG-LAG--VTALAAGGNGTTVAIS 261

Query: 358 A--------GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVV 408
           A        G ++ +GD + G LG G     +TP +V    GL +V A A G +H+ A+ 
Sbjct: 262 AHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQV---LGLTSVTALAAGAFHSLALR 318

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG---- 464
           +             G ++ WG+   G+LG G   AR  P  V  L   +   V+ G    
Sbjct: 319 D------------DGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLT--SVIAVAAGGGDD 364

Query: 465 -------HSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACG 516
                  HSL  AL + G V+  G  +  Q GD   A    P +V  +LT      +  G
Sbjct: 365 SLGMRGDHSL--ALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVS-ELTGG--TALVAG 419

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           D H  VL S   V+ WG  ++G+LG G T  R  P  V  L    + ++  G   + A+
Sbjct: 420 DLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGL--AAITALATGDGHSVAV 476



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 162/385 (42%), Gaps = 50/385 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGR------ 243
           G V+ WG+  G G LG          G K     P  V+   +  V  +A GG       
Sbjct: 213 GTVWAWGD-NGYGQLG---------DGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVAI 260

Query: 244 --HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
             H+  +   G V++WG+   G+LG G  ++ + P  +  L   +V  +A G  H+ A+ 
Sbjct: 261 SAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATP--VQVLGLTSVTALAAGAFHSLALR 318

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS------SVSCGPWHTAVV 355
             G ++ WG  N + G LG G   +   P ++ G    I V+      S+     H+  +
Sbjct: 319 DDGTVWAWG--NNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLAL 376

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
            S G ++ +G       G G   + +TP +V  L G   + A  G  H A V++      
Sbjct: 377 KSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALVA--GDLH-AVVLK------ 427

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                S G ++ WGD   G+LG G    R  P  V+ L          GHS  VA+ + G
Sbjct: 428 -----SDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHS--VAVGSDG 480

Query: 476 HVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            ++  G    GQLG    A  ++P +  G  +   +  +A GD H   L     V+TWG 
Sbjct: 481 GIWAWGDNRRGQLGIGITATREIPVQATGLAS---ISALAAGDSHSLALRGNGSVWTWGS 537

Query: 535 GANGRLGHGDTDDRNFPSLVEALKD 559
            A G+LG G   DR   + V  L D
Sbjct: 538 NAYGQLGDGTAIDRATAAQVPGLTD 562



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 23/224 (10%)

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
           V+ + +  V  +A G  H+  +   G +++WG    G+LG+G     S P  +  L    
Sbjct: 655 VQVSGLTGVTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTG-- 712

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           V  +A G  H+ A+   G ++ WG ++  FG LG G       P ++ G     +V +++
Sbjct: 713 VIALAAGNGHSLALRTDGTVWGWGANS--FGQLGDGTTTPRSTPTQVPGL---TNVIALN 767

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            G ++T  + S   ++ +G  + G LG G     +TP +V  L  +  +  A G  H  A
Sbjct: 768 AGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPVQVSGLTDVTAL--AAGNAHALA 825

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
           +             +   ++ WG   RG++  GD  A ++P  V
Sbjct: 826 L------------RTDRTVWAWGGNQRGQI--GDGTASIMPAPV 855


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 121/214 (56%), Gaps = 15/214 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACG 293
           +  I CG  H+  ++K GE+F+WG+ L G+LG G + + +  P+L++ L  + +  ++ G
Sbjct: 49  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           + H+ A+++SG++Y+WG ++   G LG G+      P  L   L+   V  ++CG  HTA
Sbjct: 109 KAHSMALSMSGNIYSWGRND--LGQLGLGHTDGEEFPS-LVEALDSQKVEFLACGGSHTA 165

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++T  GQ+FTFG G  G LGH    +   PR V  L G+R  + ACG  HT A V  +  
Sbjct: 166 LLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDL-- 223

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                    GK+F++G G  G+LG+G    +L+P
Sbjct: 224 ---------GKVFSFGSGKEGQLGNGGTHNQLIP 248



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 14/212 (6%)

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACG 400
           +  ++CG +H+  ++  G+LF +G    G LG G    S+ TP+ V+ L G+  V+ + G
Sbjct: 49  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             H+ A+              SG +++WG  D G+LG G  +    P+ V AL       
Sbjct: 109 KAHSMAL------------SMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEF 156

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH- 519
           ++CG S T  LT  G V+T G+  +GQLG      +L  R+  +LT   V ++ACG  H 
Sbjct: 157 LACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHT 216

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
           +A ++   +V+++G G  G+LG+G T ++  P
Sbjct: 217 LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 248



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 27/266 (10%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           + + ++  G  H  +++  G+ F +            +  + H +    L+  ++  + C
Sbjct: 7   MKIHSVDQGAEHMLILSSDGKPFEY------------NYSIEHARFQCILQEKSIIQITC 54

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G++H+ A++  G+++ W G N + G LG G   +     +L   L G+ +  +S G  H+
Sbjct: 55  GDYHSLALSKGGELFAW-GQNLH-GQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAHS 112

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
             ++ +G ++++G    G LG G       P  V++L   +    ACG  HTA + E   
Sbjct: 113 MALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTE--- 169

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA-L 471
                     G++FT+G G  G+LGH   +  L P  V  L      QV+CG   T+A +
Sbjct: 170 ---------DGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYV 220

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKL 497
           +  G V++ GS   GQLG+   + +L
Sbjct: 221 SDLGKVFSFGSGKEGQLGNGGTHNQL 246



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 27/237 (11%)

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           + + SV  G  H  +++S G+ F +              S+   R    L+    ++  C
Sbjct: 7   MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQITC 54

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNF 458
           G +H+ A+               G+LF WG    G+LG G   A +  P  V  L     
Sbjct: 55  GDYHSLAL------------SKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPL 102

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGD 517
            Q+S G + ++AL+ +G++Y+ G    GQLG    +G+  P+ VE  L    VE +ACG 
Sbjct: 103 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEA-LDSQKVEFLACGG 161

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            H A+LT   +V+T+G G +G+LGH  T +   P LV  L   +V  + CG   T A
Sbjct: 162 SHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLA 218



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 13/187 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+    G LG G      +A +      P+ VE    + +  I+ G  H+  ++
Sbjct: 66  GELFAWGQNL-HGQLGIG----RLFASIP----TPQLVEHLSGVPLVQISAGKAHSMALS 116

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G ++SWG    G+LG G       P L++AL +  VE +ACG  HT  +T  G ++T+
Sbjct: 117 MSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTF 176

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G      G LGH +  +   P +L   L GI V+ V+CG  HT A V+  G++F+FG G 
Sbjct: 177 GAG--KHGQLGHNSTQNELRP-RLVTELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGK 233

Query: 369 FGVLGHG 375
            G LG+G
Sbjct: 234 EGQLGNG 240



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 5/147 (3%)

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           DG      +  + AR    C+  L E +  Q++CG   ++AL+  G ++  G  ++GQLG
Sbjct: 25  DGKPFEYNYSIEHARF--QCI--LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLG 80

Query: 490 DPKANGKLPT-RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
             +    +PT ++   L+   + +I+ G  H   L+    +Y+WG+   G+LG G TD  
Sbjct: 81  IGRLFASIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGE 140

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
            FPSLVEAL  ++V+ + CG S TA +
Sbjct: 141 EFPSLVEALDSQKVEFLACGGSHTALL 167



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 14/161 (8%)

Query: 178 SQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQ 236
           S G  H    S+ G+++ WG     G LG G H  G       + F P  VE+     V+
Sbjct: 106 SAGKAHSMALSMSGNIYSWGR-NDLGQLGLG-HTDG-------EEF-PSLVEALDSQKVE 155

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
            +ACGG H AL+T+ G+VF++G    G+LGH    +   P+L+  L  I V  VACG  H
Sbjct: 156 FLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRH 215

Query: 297 TCA-VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
           T A V+  G ++++G      G LG+G   +  +P  +  P
Sbjct: 216 TLAYVSDLGKVFSFGSGKE--GQLGNGGTHNQLIPLPMKLP 254


>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 491

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 154/314 (49%), Gaps = 20/314 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLIDALKNINVELVACG 293
           V+ ++    HAA VT+ G+VF+ G+      GH      +  P+L++AL  I  + V+ G
Sbjct: 165 VEQVSASHNHAAFVTQSGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVG 224

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            + +  +T  G +YT G +   +G LGHGN +    PK +   +E   V  ++ GP +  
Sbjct: 225 HNFSVFLTRQGHVYTCGTNT--YGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVL 282

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS--LKGLRTVRAACGVWHTAAVVEVM 411
            V + G++++FG G+   LGHG++ +   PR + +  LK +  V  + G  H  A+    
Sbjct: 283 AVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALD--- 339

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                    S+G ++TWG G  G LGHGD+  + +P  + +L      QV      T  L
Sbjct: 340 ---------SNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFVL 390

Query: 472 TTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
             TG VY  G   +G LG P    ++  L  R    L  + V +I+ G YH  V+T + +
Sbjct: 391 VDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVVTEKGK 450

Query: 529 VYTWGKGANGRLGH 542
           ++ +G     +LGH
Sbjct: 451 IFGFGDNERAQLGH 464



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 136/275 (49%), Gaps = 21/275 (7%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP-KKLNGPLEGIHVSSVSCG 348
           +A G +HT  ++ +G +Y+ G S C  G+LGHG+E +  +   ++N P   I+V  VS  
Sbjct: 116 IATGRYHTLLIS-NGSVYSCGSSLC--GVLGHGSETTQCVTFTRINFP-PSIYVEQVSAS 171

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
             H A VT +GQ+FT GD +    GH D    +  PR V++L G+   + + G  H  +V
Sbjct: 172 HNHAAFVTQSGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVG--HNFSV 229

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP-NFCQVSCGHS 466
                          G ++T G    G+LGHG+      P  V  LVE  +  Q++ G S
Sbjct: 230 FLT----------RQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPS 279

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV--EGKLTKNFVEEIACGDYHVAVLT 524
             +A+   G VY+ GS     LG  + + +   RV    +L    V  ++ GD H   L 
Sbjct: 280 YVLAVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALD 339

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD 559
           S   VYTWGKG  G LGHGD  D+  P  + +LK+
Sbjct: 340 SNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKN 374



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 138/286 (48%), Gaps = 20/286 (6%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P+ VE+   +  + ++ G   +  +T+QG V++ G    G+LGHG   +   PK++  
Sbjct: 205 FRPRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQR 264

Query: 282 LKNI-NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEG 339
           L  I +V  +A G  +  AV   G +Y++G S  NF  LGHG + + + P+ L    L+ 
Sbjct: 265 LVEIGSVIQIAAGPSYVLAVVNDGRVYSFG-SGSNF-CLGHGEQHNEFQPRVLQTFRLKN 322

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           IHV SVS G  H   + S G ++T+G G  G LGHGD I  + P+ ++SLK    V+   
Sbjct: 323 IHVVSVSAGDEHAVALDSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCA 382

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK---EARLVPTCVAALVEP 456
               T  +V+            +G ++ +G    G LG  D+   +  L P  + +L   
Sbjct: 383 RKRKTFVLVD------------TGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVH 430

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRV 501
              Q+S G   TV +T  G ++  G     QLG     G L PT +
Sbjct: 431 RVSQISTGLYHTVVVTEKGKIFGFGDNERAQLGHESLRGCLEPTEI 476



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 148/342 (43%), Gaps = 23/342 (6%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKLIDALKNINVELVACGEHHTCA 299
           GR+  L+   G V+S G  L G LGHG ++   V+  + I+   +I VE V+   +H   
Sbjct: 119 GRYHTLLISNGSVYSCGSSLCGVLGHGSETTQCVTFTR-INFPPSIYVEQVSASHNHAAF 177

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           VT SG ++T G  N +F   GH +        +L   L GI    VS G   +  +T  G
Sbjct: 178 VTQSGQVFTCG-DNSSF-CCGHRDTSCRIFRPRLVEALNGIPCKQVSVGHNFSVFLTRQG 235

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV-RAACGVWHTAAVVEVMVGSSSSS 418
            ++T G  T+G LGHG+ +   TP+ V  L  + +V + A G  +  AVV          
Sbjct: 236 HVYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVV---------- 285

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF--CQVSCGHSLTVALTTTGH 476
             + G+++++G G    LGHG++     P  +      N     VS G    VAL + G 
Sbjct: 286 --NDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGL 343

Query: 477 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           VYT G    G LG      K   +    L  +   ++        VL     VY +G   
Sbjct: 344 VYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYGFGWMG 403

Query: 537 NGRLGHGD---TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G LG  D   +D    P  +++L+  +V  I  G   T  +
Sbjct: 404 FGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVV 445



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 111/236 (47%), Gaps = 18/236 (7%)

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWH 403
           ++ G +HT ++ S G +++ G    GVLGHG   +   T   ++    +   + +    H
Sbjct: 116 IATGRYHTLLI-SNGSVYSCGSSLCGVLGHGSETTQCVTFTRINFPPSIYVEQVSASHNH 174

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQVS 462
            A V +            SG++FT GD      GH D   R+  P  V AL      QVS
Sbjct: 175 AAFVTQ------------SGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVS 222

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVA 521
            GH+ +V LT  GHVYT G+  YGQLG      G  P  V+  +    V +IA G  +V 
Sbjct: 223 VGHNFSVFLTRQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVL 282

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFTAAI 575
            + +   VY++G G+N  LGHG+  +   P +++   LK+  V S+  G     A+
Sbjct: 283 AVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVAL 338


>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Ailuropoda melanoleuca]
          Length = 1011

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 165/344 (47%), Gaps = 39/344 (11%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  S V+ P  + ALK   V+  ACG +HT
Sbjct: 50  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 109

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNE--------MSLWLPKKLNGPLEGIHVSSVSCGP 349
              T  G +Y  GG+N   G LG G+         +S +  ++         +  +S G 
Sbjct: 110 LVSTEGGKVYASGGNNE--GQLGLGDTDERNSFHLISFFTSQR--------KIKQLSAGS 159

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             +A +T  G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V  
Sbjct: 160 NTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWI--SCGYYHSAFVT- 216

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSL 467
                      + G+L+T+G+ + G+LG   +      +P  V  + E    QV+CG   
Sbjct: 217 -----------TEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPE-KVVQVACGGGH 264

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIACGDYHVAVLTSR 526
           TV LT    VYT G   +GQLG      + P  +V   +    +  I CG+ H A++T  
Sbjct: 265 TVVLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDL 323

Query: 527 TEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
             +YT+G G +G+LG G  +  N   P+L        V+ + CG
Sbjct: 324 GLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACG 367



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 144/298 (48%), Gaps = 23/298 (7%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            KN     ++CG+ HT  VT +  +Y +G +  N+G LG G++ ++  P  +   L+   
Sbjct: 42  FKNDIPAFLSCGDEHTAIVTGNNKLYMFGSN--NWGQLGLGSKSTVNKPTCVKA-LKPEK 98

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V   +CG  HT V T  G+++  G    G LG GD    ++   +      R ++     
Sbjct: 99  VKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAG 158

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            +T+A +              G+LF WGD   G++G  +     VP  V   V      +
Sbjct: 159 SNTSAAL-----------TEDGELFMWGDNSEGQIGLKNITNVCVPQQVT--VGKPISWI 205

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDY 518
           SCG+  +  +TT G +YT G P  G+LG PK    N ++P  V G   K  V ++ACG  
Sbjct: 206 SCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEK--VVQVACGGG 263

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H  VLT +  VYT+G G  G+LG G    +   P ++E +KD ++ SI CG + TA I
Sbjct: 264 HTVVLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALI 320



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 151/313 (48%), Gaps = 35/313 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G+V++ G    G+LG G   + +   LI    
Sbjct: 88  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFT 147

Query: 284 NI-NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +   ++ ++ G + + A+T  G+++ WG ++   G +G  N  ++ +P+++     G  +
Sbjct: 148 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSE--GQIGLKNITNVCVPQQVTV---GKPI 202

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL--RTVRAACG 400
           S +SCG +H+A VT+ G+L+TFG+   G LG   ++ V+  R   S+ G+  + V+ ACG
Sbjct: 203 SWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNH-RMPQSVPGIPEKVVQVACG 261

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G       VP  +  + +    
Sbjct: 262 GGHTVVLTEKAV-------------YTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKIS 308

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF----VEE 512
            + CG + T  +T  G +YT G   +G+LG   +   N   PT     L  NF    V+ 
Sbjct: 309 SIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPT-----LCSNFLRFIVQL 363

Query: 513 IACGDYHVAVLTS 525
           +ACG  H  V  +
Sbjct: 364 VACGGCHTLVFAT 376



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 26/264 (9%)

Query: 146 LSSGGSDGRTG-HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGIL 204
           L  G +D R   HL        ++   SA S++S     D     G++F+WG+ +   I 
Sbjct: 129 LGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTED-----GELFMWGDNSEGQI- 182

Query: 205 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 264
                      G+K  + V    +  V   +  I+CG  H+A VT +GE++++GE   G+
Sbjct: 183 -----------GLKNITNVCVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGK 231

Query: 265 LGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
           LG      V+H  P+ +  +    V+ VACG  HT  +T    +YT+G     FG LG G
Sbjct: 232 LGLPKQLLVNHRMPQSVPGIPEKVVQ-VACGGGHTVVLTEKA-VYTFGLG--QFGQLGLG 287

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG--DRISV 380
             +      K+   ++ + +SS+ CG  HTA++T  G ++TFGDG  G LG G  +  + 
Sbjct: 288 TFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQ 347

Query: 381 STPREVDSLKGLRTVRAACGVWHT 404
            TP    +         ACG  HT
Sbjct: 348 FTPTLCSNFLRFIVQLVACGGCHT 371


>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 371

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 164/342 (47%), Gaps = 47/342 (13%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
            I+CG  H AL+TK G +F +G    G+LG G    V+ P  + ALK+  V L ACG +H
Sbjct: 30  QISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVLLAACGRNH 89

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G +++ GG+  + G LG G+       ++++       +  ++ G   +A +T
Sbjct: 90  TLICTGEGRVFSSGGN--SEGQLGLGDCEERTTFRRIHALDSLGPIKMLAAGSNTSAALT 147

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            +G+LF +GD T G +G G       P+EV    G      +CG +H+A V         
Sbjct: 148 ESGKLFMWGDNTEGQIGLGKESHAPWPQEVSV--GAPVSWVSCGYYHSALVT-------- 197

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
               ++G L+T+G+ D G+LG   ++     VP  V ++ EP   QV+CG   TVALT  
Sbjct: 198 ----AAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSIGEP-VRQVACGGGHTVALTGG 252

Query: 475 G-------------------------HVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTK 507
           G                          ++T G   +GQLG        +LP  VE    K
Sbjct: 253 GSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVE-HFKK 311

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
             V ++ACG+ H AV+T    +YT+G G +G+LG GD +  N
Sbjct: 312 GRVRQVACGENHSAVITDGGLLYTFGDGRHGKLGLGDENFTN 353



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 149/326 (45%), Gaps = 53/326 (16%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           LKN     ++CG+ HT  +T +G ++ +G +  N+G LG G+++++  P  +   L+   
Sbjct: 23  LKNDVPSQISCGDEHTALITKNGRLFMFGSN--NWGQLGLGSKVTVNKPTCVK-ALKSEK 79

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACG 400
           V   +CG  HT + T  G++F+ G  + G LG GD    +T R + +L  L  ++  A G
Sbjct: 80  VLLAACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALDSLGPIKMLAAG 139

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
              +AA+ E            SGKLF WGD   G++G G +     P  V+  V      
Sbjct: 140 SNTSAALTE------------SGKLFMWGDNTEGQIGLGKESHAPWPQEVS--VGAPVSW 185

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLG-----DPKANGKLPTRVEGKLTKNFVEEIAC 515
           VSCG+  +  +T  G +YT G    G+LG      P+     P R  G+     V ++AC
Sbjct: 186 VSCGYYHSALVTAAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSIGEP----VRQVAC 241

Query: 516 GDYHVAVLT-------------------------SRTEVYTWGKGANGRLGHGD-TDDRN 549
           G  H   LT                         S   ++T+G G  G+LGHG    +  
Sbjct: 242 GGGHTVALTGGGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESR 301

Query: 550 FPSLVEALKDKQVKSIVCGTSFTAAI 575
            P LVE  K  +V+ + CG + +A I
Sbjct: 302 LPRLVEHFKKGRVRQVACGENHSAVI 327



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 145/287 (50%), Gaps = 36/287 (12%)

Query: 225 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN 284
           KA++S  VL     ACG  H  + T +G VFS G    G+LG G   + +  + I AL +
Sbjct: 73  KALKSEKVLLA---ACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALDS 129

Query: 285 IN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           +  ++++A G + + A+T SG ++ WG  +   G +G G E     P++++    G  VS
Sbjct: 130 LGPIKMLAAGSNTSAALTESGKLFMWG--DNTEGQIGLGKESHAPWPQEVS---VGAPVS 184

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACGV 401
            VSCG +H+A+VT+AG L+TFG+   G LG           P+ V S+ G    + ACG 
Sbjct: 185 WVSCGYYHSALVTAAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSI-GEPVRQVACGG 243

Query: 402 WHTAAVVEVMVGSSSSS---NCSSG--------------KLFTWGDGDRGRLGHGD--KE 442
            HT A    + G  S+     C+ G              +LFT+G G  G+LGHG    E
Sbjct: 244 GHTVA----LTGGGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFE 299

Query: 443 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           +RL P  V    +    QV+CG + +  +T  G +YT G   +G+LG
Sbjct: 300 SRL-PRLVEHFKKGRVRQVACGENHSAVITDGGLLYTFGDGRHGKLG 345



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 126/288 (43%), Gaps = 60/288 (20%)

Query: 131 KVLLPSESACGSVNSL----------SSGGSDGRTGHLKGLSGDTFRV--SLSSAVSSSS 178
           KVLL   +ACG  ++L          S G S+G+ G        TFR   +L S      
Sbjct: 79  KVLL---AACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALDSLGPIKM 135

Query: 179 QGSGHDDGDSL---GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDV 235
             +G +   +L   G +F+WG+ T   I            G+  +S  P   E +V   V
Sbjct: 136 LAAGSNTSAALTESGKLFMWGDNTEGQI------------GLGKESHAPWPQEVSVGAPV 183

Query: 236 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN--VELVACG 293
             ++CG  H+ALVT  G ++++GE   G+LG   +    H ++   +++I   V  VACG
Sbjct: 184 SWVSCGYYHSALVTAAGALYTFGERDSGKLGLTTEQLPRH-RVPQPVRSIGEPVRQVACG 242

Query: 294 EHHTCAVTLSGD-------------------------MYTWGGSNCNFGLLGHGNEMSLW 328
             HT A+T  G                          ++T+G     FG LGHG  +   
Sbjct: 243 GGHTVALTGGGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLG--QFGQLGHGTFVFES 300

Query: 329 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 376
              +L    +   V  V+CG  H+AV+T  G L+TFGDG  G LG GD
Sbjct: 301 RLPRLVEHFKKGRVRQVACGENHSAVITDGGLLYTFGDGRHGKLGLGD 348



 Score = 46.6 bits (109), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 11/103 (10%)

Query: 474 TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           TG V+T G   +           +P++    L  +   +I+CGD H A++T    ++ +G
Sbjct: 2   TGAVFTFGKSKFAD--------NIPSKFW--LKNDVPSQISCGDEHTALITKNGRLFMFG 51

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
               G+LG G     N P+ V+ALK ++V    CG + T  IC
Sbjct: 52  SNNWGQLGLGSKVTVNKPTCVKALKSEKVLLAACGRNHT-LIC 93


>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 4048

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 175/391 (44%), Gaps = 45/391 (11%)

Query: 202 GILGGGIHRSGSYAGVKMDSFV----PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 257
           G+   G+++SG       +  V    P    S + + +   A G  H   V   G VFSW
Sbjct: 517 GVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSW 576

Query: 258 GEELGGRLGHGVDSDVSH-PKLIDALKN-INVELVACGEHHTCAVTLSGDMYTWGGSNCN 315
           G    G+LG G     SH P++ID+L+   ++   A   HH+  V+ +G++ T+G ++C 
Sbjct: 577 GYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC- 635

Query: 316 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
            G LG  +      P+ ++  L    V+  +CG +HT   TS G++++FG   +G LG G
Sbjct: 636 -GQLGLDHTQHQHTPQVVDA-LSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLG 693

Query: 376 DRISVSTPREVDSLKG---LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
              ++ TP  V +  G    + V  +CG +HT  + E             GKL TWG  D
Sbjct: 694 HARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISE------------KGKLITWGRND 741

Query: 433 RGRLGHGDKE----ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            G+LG G KE    A+ VP  +++ ++   C   C HSL   L + G V   G    GQL
Sbjct: 742 YGQLGIGSKEHKNSAQFVPLPMSSKIKNASC--GCYHSLI--LMSNGRVMVFGRNNKGQL 797

Query: 489 G---DPKANGKLPTRV-EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG- 543
           G      ++  LP  V    L  + V  IA G Y   +LT R+       GA   +    
Sbjct: 798 GAGARTLSSADLPLPVPSNSLANDEVVRIAAGFYSSYILTGRSSDNADLDGAADDVNQSK 857

Query: 544 --------DTDDRNFPSLVEALKDKQVKSIV 566
                   +  D  F SL++ +  K V  +V
Sbjct: 858 DLPENSCLENSDALFESLMKEIDSKYVTDVV 888



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 159/345 (46%), Gaps = 25/345 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVAC- 292
           ++++A G    A+V   G VF+ G    G+ G+G  +  V     + AL  I + +VA  
Sbjct: 499 IRDVAGGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAA 558

Query: 293 -GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPW 350
            G  H  AV   G +++WG ++   G LG G+ +S    P+ ++   E  H+++ +    
Sbjct: 559 NGCEHMLAVASDGAVFSWGYND--RGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYH 616

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           H+AVV+S G+L TFG    G LG        TP+ VD+L      +AACG++HT A    
Sbjct: 617 HSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAAT-- 674

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV---EPNFCQVSCGHSL 467
                     S G+++++G  D G+LG G       P  V   +   +     VSCG+  
Sbjct: 675 ----------SDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYH 724

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           TV ++  G + T G   YGQLG      K   +       + ++  +CG YH  +L S  
Sbjct: 725 TVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILMSNG 784

Query: 528 EVYTWGKGANGRLGHG----DTDDRNFPSLVEALKDKQVKSIVCG 568
            V  +G+   G+LG G     + D   P    +L + +V  I  G
Sbjct: 785 RVMVFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAG 829



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 96/224 (42%), Gaps = 25/224 (11%)

Query: 360 QLFTFGDGTFG--VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           +LF+ G   +G   LGH +  S        S KG+R V    G     AVV         
Sbjct: 465 ELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDV---AGGNEVLAVV--------- 512

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEAR-LVPTCVAALVEPNFCQVS----CGHSLTVALT 472
              + G +FT G    G+ G+G  E R ++ T V AL       V+    C H L VA  
Sbjct: 513 --MNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVA-- 568

Query: 473 TTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
           + G V++ G    GQLG     +    P  ++    K  +   A   +H AV++S  E+ 
Sbjct: 569 SDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELL 628

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           T+G    G+LG   T  ++ P +V+AL  + V    CG   T A
Sbjct: 629 TFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVA 672


>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
          Length = 590

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 164/339 (48%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  + +  P  I ALK   V+L ACG +HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T +G +Y  GG+N     LG  ++   +       P + I    +S G   +A +T 
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 195

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  D+ +V  P EV   K +  +  +CG +H+A V          
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 244

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                G+L+T+G+ + G+LG  ++       P  V  + E    QV+CG   TV LT   
Sbjct: 245 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK- 299

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VY  G   +GQLG       L    E K+ +   ++    I+CG+ H A++T    +YT
Sbjct: 300 VVYAFGLGQFGQLG---LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYT 356

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 157/335 (46%), Gaps = 35/335 (10%)

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           +LV   G VF++G+    +    + S           KN     ++CG+ HT  VT +  
Sbjct: 44  SLVPDTGAVFTFGKT---KFAENIPSKF-------WFKNDIPICLSCGDEHTAIVTGNNK 93

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG  HT V T  G ++  G
Sbjct: 94  LYMFGSNN--WGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGRNHTLVSTDTGGVYAAG 150

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGSSSSSNCSSGK 424
               G LG GD     T  ++       T++  + G   +AA+ E             GK
Sbjct: 151 GNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE------------DGK 198

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           LF WGD   G++G  DK    +P  V   V      +SCG+  +  +T  G +YT G P 
Sbjct: 199 LFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSAFVTMDGELYTFGEPE 256

Query: 485 YGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            G+LG P     N + P RV G   +  V ++ACG  H  VLT +  VY +G G  G+LG
Sbjct: 257 NGKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTEKV-VYAFGLGQFGQLG 313

Query: 542 HGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G    + + P ++E +KD+++  I CG + TA +
Sbjct: 314 LGTFLFETSEPKIIERIKDQKICHISCGENHTALM 348



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 152/322 (47%), Gaps = 37/322 (11%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDV 273
           G K     P  +++     V+  ACG  H  + T  G V++ G    G+LG G   D D 
Sbjct: 108 GSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT 167

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            H +++       ++ ++ G + + A+T  G ++ WG ++   G +G  ++ ++ +P ++
Sbjct: 168 FH-QIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEV 224

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKG 391
                G  +S +SCG +H+A VT  G+L+TFG+   G LG  + + ++  +P+ V  +  
Sbjct: 225 T---VGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE 281

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCV 450
            R ++ ACG  HT  + E +V             + +G G  G+LG G        P  +
Sbjct: 282 -RVIQVACGGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKII 327

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTK 507
             + +   C +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L  
Sbjct: 328 ERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPT-----LCS 382

Query: 508 NF----VEEIACGDYHVAVLTS 525
           NF    V+ IACG  H+ V  +
Sbjct: 383 NFLRFAVQLIACGGCHMLVFAT 404



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 36/264 (13%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTGHLKGLSGDTFR--VSLSSAVSS 176
           P KV L   +ACG  ++L S          G ++G+ G       DTF   V  + A + 
Sbjct: 124 PEKVKL---AACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI 180

Query: 177 SSQGSGHDDGDSL---GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
               +G +   +L   G +F+WG+             S    G++  S V    E  V  
Sbjct: 181 KQLSAGANTSAALTEDGKLFMWGD------------NSEGQIGLEDKSNVCIPHEVTVGK 228

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVA 291
            +  I+CG  H+A VT  GE++++GE   G+LG   +  ++H  P+ +  +    ++ VA
Sbjct: 229 PISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VA 287

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           CG  HT  +T    +Y +G     FG LG G  +      K+   ++   +  +SCG  H
Sbjct: 288 CGGGHTVVLT-EKVVYAFGLG--QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENH 344

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG 375
           TA++T  G L+TFGDG  G LG G
Sbjct: 345 TALMTELGLLYTFGDGRHGKLGLG 368


>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
           catus]
          Length = 993

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 153/310 (49%), Gaps = 23/310 (7%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  S VS P  + ALK   V+  ACG +HT
Sbjct: 40  LSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G +Y  GG+N   G LG G+         ++       +  +S G   +A +T 
Sbjct: 100 LVSTEGGKVYAAGGNNE--GQLGLGDTEERNTFHLISFFTSQHKIKQLSAGSNTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  D  +V  P++V   K +  +  +CG +H+A V          
Sbjct: 158 DGELFMWGDNSEGQIGLKDVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
              + G+L+T+G+ + G+LG  ++      +P  V  + E    QV+CG   TV LT   
Sbjct: 207 ---TEGELYTFGEPESGKLGLPNQLLCNHRMPQPVPGIPE-KVVQVACGGGHTVVLTEKA 262

Query: 476 HVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
            VYT G   +GQ  LG       +P  +E  +    +  I+CG+ H A++T    +YT+G
Sbjct: 263 -VYTFGLGQFGQLGLGTFLFETSVPKVIE-HVKDQKISSISCGENHTALITDIGLMYTFG 320

Query: 534 KGANGRLGHG 543
            G  G+LG G
Sbjct: 321 DGRYGKLGLG 330



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 158/338 (46%), Gaps = 33/338 (9%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G    +V   G VF++G+    R    + S           KN    +++CG+ HT  VT
Sbjct: 2   GESEEVVPDSGAVFTFGK---TRFAENIPSKF-------WFKNDIPTVLSCGDEHTAVVT 51

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
            +  +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG  HT V T  G++
Sbjct: 52  GNKKLYMFGSNN--WGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACGRNHTLVSTEGGKV 108

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +  G    G LG GD    +T   +        ++      +T+A +             
Sbjct: 109 YAAGGNNEGQLGLGDTEERNTFHLISFFTSQHKIKQLSAGSNTSAAL-----------TE 157

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            G+LF WGD   G++G  D     VP  V   V      +SCG+  +  +TT G +YT G
Sbjct: 158 DGELFMWGDNSEGQIGLKDVTNVCVPQQVT--VGKPISWISCGYYHSAFVTTEGELYTFG 215

Query: 482 SPVYGQLGDPKA---NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
            P  G+LG P     N ++P  V G   K  V ++ACG  H  VLT +  VYT+G G  G
Sbjct: 216 EPESGKLGLPNQLLCNHRMPQPVPGIPEK--VVQVACGGGHTVVLTEKA-VYTFGLGQFG 272

Query: 539 RLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG G    + + P ++E +KD+++ SI CG + TA I
Sbjct: 273 QLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALI 310



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 26/248 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ ++ G   +A +T+ GE+F WG+   G++G    ++V  P+ +   K I+   ++CG 
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKDVTNVCVPQQVTVGKPIS--WISCGY 199

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI--HVSSVSCGPWHT 352
           +H+  VT  G++YT+G      G LG  N+  L    ++  P+ GI   V  V+CG  HT
Sbjct: 200 YHSAFVTTEGELYTFGEPES--GKLGLPNQ--LLCNHRMPQPVPGIPEKVVQVACGGGHT 255

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            V+T    ++TFG G FG LG G  +   S P+ ++ +K  +    +CG  HTA + ++ 
Sbjct: 256 VVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALITDI- 313

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCG--HSL 467
                      G ++T+GDG  G+LG G  +   + +PT  +  +      VSCG  H L
Sbjct: 314 -----------GLMYTFGDGRYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCGGCHML 362

Query: 468 TVALTTTG 475
             A+   G
Sbjct: 363 VFAVPRLG 370



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 152/311 (48%), Gaps = 35/311 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G+V++ G    G+LG G   + +   LI    
Sbjct: 78  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G+++ WG ++   G +G  +  ++ +P+++     G  +
Sbjct: 138 SQHKIKQLSAGSNTSAALTEDGELFMWGDNSE--GQIGLKDVTNVCVPQQVTV---GKPI 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL--RTVRAACG 400
           S +SCG +H+A VT+ G+L+TFG+   G LG  +++ +   R    + G+  + V+ ACG
Sbjct: 193 SWISCGYYHSAFVTTEGELYTFGEPESGKLGLPNQL-LCNHRMPQPVPGIPEKVVQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G       VP  +  + +    
Sbjct: 252 GGHTVVLTEKAV-------------YTFGLGQFGQLGLGTFLFETSVPKVIEHVKDQKIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIA-- 514
            +SCG + T  +T  G +YT G   YG+LG   +   N  LPT     L  +F+  IA  
Sbjct: 299 SISCGENHTALITDIGLMYTFGDGRYGKLGLGLENFTNQFLPT-----LCSHFLRFIAQL 353

Query: 515 --CGDYHVAVL 523
             CG  H+ V 
Sbjct: 354 VSCGGCHMLVF 364



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--P 276
            ++ VPK +E      + +I+CG  H AL+T  G ++++G+   G+LG G+++  +   P
Sbjct: 281 FETSVPKVIEHVKDQKISSISCGENHTALITDIGLMYTFGDGRYGKLGLGLENFTNQFLP 340

Query: 277 KLIDALKNINVELVACGEHHTCAVTL 302
            L         +LV+CG  H     +
Sbjct: 341 TLCSHFLRFIAQLVSCGGCHMLVFAV 366


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 167/347 (48%), Gaps = 36/347 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RH+ L+     V S G+   G+LG         P+ I AL+ + V+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG GS    G +G   E+S + PKK+   L  I +  VSCG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKIMT-LNDIKIIQVSCGHYHSLALSK 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             Q+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
            S C  G  F WG    G+L    +   +    P  V AL       +SCG + T  LT 
Sbjct: 197 -SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253

Query: 474 TGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTE 528
            G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A + +  +
Sbjct: 254 DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308

Query: 529 VYTWGKGAN--GRLGHGDTDDRNF--PSLV--EALKDKQVKSIVCGT 569
           V ++G G +   +  H +    NF    L+  E   D QVK I  GT
Sbjct: 309 VVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT 355



 Score =  104 bits (260), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 142/296 (47%), Gaps = 29/296 (9%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDS-LGDVFIWGE 197
           +CG     +S G  GR G  +G   +  +   +  V   S G  H       G VF WG 
Sbjct: 46  SCGD----NSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG- 100

Query: 198 CTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 257
              +G LG G          K  SF PK + +   + +  ++CG  H+  ++K  +VFSW
Sbjct: 101 AGSEGQLGIG--------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 258 GEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 316
           G+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + W GSN   
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW-GSNSAG 211

Query: 317 GLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
            L   G  + +   K L+ G L+ + V  +SCG  HTAV+T  G++FTFGD   G LG+ 
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 376 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
                  P+ V+ + GL + +  CG +HT A V            ++G++ ++G G
Sbjct: 272 PTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVH-----------TTGQVVSFGHG 315



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L +  
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   + P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  + G+L   G       N P  V ALK+  V  I CG +
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251


>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
           cuniculus]
          Length = 882

 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 167/346 (48%), Gaps = 43/346 (12%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  + ++ P  + ALK   V+ VACG +HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G++Y  GG+N   G LG G+         ++       +  +S G   +A +T 
Sbjct: 100 LVSTEEGNVYATGGNND--GQLGLGDTEGRNTFYPISFFTSQHKIKQLSAGSNTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  +  +V  P +V   K +  +  +CG +H+A V          
Sbjct: 158 NGELFMWGDNSEGQIGLKNVTNVCVPHQVTIGKPISWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLV----PTCVAALVEPNFCQVSCGHSLTVALTT 473
                G+L+T+G+ + G+LG    E  L+    P  V  + E    QV+CG   TV LT 
Sbjct: 207 ---MDGELYTFGECENGKLGL--PEELLINHKTPQLVTRIPE-KVIQVACGGGHTVVLTE 260

Query: 474 TGHVYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
           T  VYT G   +GQLG         +PKA       +E  +  + +  I+CG+ H A++T
Sbjct: 261 T-IVYTFGLGQFGQLGLGTFIFETSEPKA-------IE-YIKDHKISSISCGENHTALIT 311

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
               +YT+G G  G+LG G  +  N   P+L        ++ + CG
Sbjct: 312 ELGRMYTFGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACG 357



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 158/342 (46%), Gaps = 41/342 (11%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G    LV   G VF++G+    +    + S           KN     ++CG+ HT  VT
Sbjct: 2   GEPEGLVPGSGAVFTFGK---TKFAENIPSKF-------WFKNDVPTYLSCGDEHTAVVT 51

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
            +  +Y +G +  N+G LG G++ ++  P  +   L+   V  V+CG  HT V T  G +
Sbjct: 52  GNNKLYMFGSN--NWGQLGLGSKTTINKPTCVKA-LKPEKVKYVACGRNHTLVSTEEGNV 108

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +  G    G LG GD             +G  T            + ++  GS++S+  +
Sbjct: 109 YATGGNNDGQLGLGD------------TEGRNTFYPISFFTSQHKIKQLSAGSNTSAALT 156

Query: 422 -SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            +G+LF WGD   G++G  +     VP  V   +      +SCG+  +  +T  G +YT 
Sbjct: 157 ENGELFMWGDNSEGQIGLKNVTNVCVPHQVT--IGKPISWISCGYYHSAFVTMDGELYTF 214

Query: 481 GSPVYGQLGDPKA---NGKLP---TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           G    G+LG P+    N K P   TR+  K+      ++ACG  H  VLT  T VYT+G 
Sbjct: 215 GECENGKLGLPEELLINHKTPQLVTRIPEKVI-----QVACGGGHTVVLT-ETIVYTFGL 268

Query: 535 GANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G  G+LG G    + + P  +E +KD ++ SI CG + TA I
Sbjct: 269 GQFGQLGLGTFIFETSEPKAIEYIKDHKISSISCGENHTALI 310



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 152/310 (49%), Gaps = 29/310 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS--DVSHPKLIDA 281
           P  V++     V+ +ACG  H  + T++G V++ G    G+LG G     +  +P     
Sbjct: 78  PTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISFFT 137

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            ++  ++ ++ G + + A+T +G+++ WG ++   G +G  N  ++ +P ++     G  
Sbjct: 138 SQH-KIKQLSAGSNTSAALTENGELFMWGDNSE--GQIGLKNVTNVCVPHQVTI---GKP 191

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAAC 399
           +S +SCG +H+A VT  G+L+TFG+   G LG  + + ++  TP+ V  +   + ++ AC
Sbjct: 192 ISWISCGYYHSAFVTMDGELYTFGECENGKLGLPEELLINHKTPQLVTRIPE-KVIQVAC 250

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNF 458
           G  HT  + E +V             +T+G G  G+LG G        P  +  + +   
Sbjct: 251 GGGHTVVLTETIV-------------YTFGLGQFGQLGLGTFIFETSEPKAIEYIKDHKI 297

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIAC 515
             +SCG + T  +T  G +YT G   YG+LG   +   N  +PT       +  ++ +AC
Sbjct: 298 SSISCGENHTALITELGRMYTFGDGRYGKLGLGLENFTNQFVPTLC-CDFLRFMIQLVAC 356

Query: 516 GDYHVAVLTS 525
           G  H+ +  +
Sbjct: 357 GGCHMVIFAT 366



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 7/92 (7%)

Query: 212 GSYAGVKMDSFV-----PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 266
           G +  + + +F+     PKA+E      + +I+CG  H AL+T+ G ++++G+   G+LG
Sbjct: 269 GQFGQLGLGTFIFETSEPKAIEYIKDHKISSISCGENHTALITELGRMYTFGDGRYGKLG 328

Query: 267 HGVDSDVSH--PKLIDALKNINVELVACGEHH 296
            G+++  +   P L        ++LVACG  H
Sbjct: 329 LGLENFTNQFVPTLCCDFLRFMIQLVACGGCH 360


>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
          Length = 596

 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 164/327 (50%), Gaps = 30/327 (9%)

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           +S G+   G+LG   D     P+ I AL +++V+LV+CG+ H+ AV   G ++ WG GS 
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSE 60

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              G +G   E+S ++P K+   L GI +  VSCG +H+  ++  G +F++G  + G LG
Sbjct: 61  GQLG-IGEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 117

Query: 374 HG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
            G +  S + P++V SL+G+   + A G  H+ A+   + G+S          F WG   
Sbjct: 118 LGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL--SLTGTS----------FGWGSNR 165

Query: 433 RGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            G+L   G+  KE    P  + AL   +   +SCG+  T  LT  G V+T G    GQL 
Sbjct: 166 SGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQ 225

Query: 490 -DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKG----ANGRLGHG 543
             P++  + P  +EG      V +I C  YH +A + +  +V + G+G    +N      
Sbjct: 226 PSPRSGQRGPQLIEG--IGGRVSQIECASYHTIAYVYTTGQVVSLGRGPSHTSNPTHQEA 283

Query: 544 DTDDRNFPSLV--EALKDKQVKSIVCG 568
             ++ +   L+  E L D +VK I  G
Sbjct: 284 PAENSDITCLLAAEDLVDIEVKDIFAG 310



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 22/264 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDAL 282
           P+ +++   L V  ++CG  H+  V  +G+VF WG    G+LG G   ++S  P  I AL
Sbjct: 22  PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQLGIGEFKEISFMPTKIKAL 81

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIH 341
             I +  V+CG +H+ A++  G +++WG +  + G LG G N  S  +P+K+   LEGI 
Sbjct: 82  AGIKIIQVSCGHYHSLALSEDGHVFSWGRN--SEGQLGLGKNSRSQAIPQKVKS-LEGIP 138

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           ++ V+ G  H+  ++  G  F +G    G   + G+  +  +  P  + +LK L  +  +
Sbjct: 139 LAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYIS 198

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HTA + E             G++FT+G    G+L    +  +  P  +   +    
Sbjct: 199 CGYEHTAVLTE------------EGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG-IGGRV 245

Query: 459 CQVSCGHSLTVA-LTTTGHVYTMG 481
            Q+ C    T+A + TTG V ++G
Sbjct: 246 SQIECASYHTIAYVYTTGQVVSLG 269



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 115/221 (52%), Gaps = 13/221 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG  + +G LG G          K  SF+P  +++   + +  ++CG  H+  ++
Sbjct: 50  GKVFPWGAGS-EGQLGIG--------EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALS 100

Query: 250 KQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           + G VFSWG    G+LG G +S   + P+ + +L+ I +  VA G  H+ A++L+G  + 
Sbjct: 101 EDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG 160

Query: 309 WGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG +      L G+  +  ++ P  + G L+ + V  +SCG  HTAV+T  GQ+FTFG  
Sbjct: 161 WGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFGGN 219

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           + G L    R     P+ ++ + G R  +  C  +HT A V
Sbjct: 220 SSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYV 259



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 204 LGGGIHRSGSYA----GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
            G G +RSG  A     VK   + P ++ +   L V  I+CG  H A++T++G+VF++G 
Sbjct: 159 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 218

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 310
              G+L     S    P+LI+ +    V  + C  +HT A V  +G + + G
Sbjct: 219 NSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLG 269


>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 918

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 166/341 (48%), Gaps = 33/341 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  S VS P  + ALK   V+  ACG +HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G +Y  GG+N   G LG G+         ++       +  +S G   +A +T 
Sbjct: 100 LVSTEGGKVYAAGGNNE--GQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V          
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGD------KEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
              + G+L+T+G+ + G+LG  +      +  + VP     +V     QV+CG   TV L
Sbjct: 207 ---TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVV-----QVACGGGHTVVL 258

Query: 472 TTTGHVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           T    VYT G   +GQ  LG       +P  +E  +    +  IACG+ H A++T    +
Sbjct: 259 TEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLM 316

Query: 530 YTWGKGANGRLGHG--DTDDRNFPSLVEALKDKQVKSIVCG 568
           YT+G G +G+LG G  ++ ++  P+L        V+ + CG
Sbjct: 317 YTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 23/291 (7%)

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            ++CG+ HT  VT +  +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG
Sbjct: 39  FLSCGDEHTAVVTGNNKLYMFGSNN--WGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACG 95

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             HT V T  G+++  G    G LG GD    ST   +      R ++      +T+A +
Sbjct: 96  RNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAAL 155

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                         G+LF WGD   G++G  +     VP  V   V      +SCG+  +
Sbjct: 156 -----------TEDGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWISCGYYHS 202

Query: 469 VALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             +TT G +YT G P  G+LG P     N ++P  V G   K  V ++ACG  H  VLT 
Sbjct: 203 AFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK--VVQVACGGGHTVVLTE 260

Query: 526 RTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +  VYT+G G  G+LG G    + + P  +E +KD+++  I CG + TA I
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 129/253 (50%), Gaps = 26/253 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ ++ G   +A +T+ GE+F WG+   G++G    ++V  P+ +   K I+   ++CG 
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPIS--WISCGY 199

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI--HVSSVSCGPWHT 352
           +H+  VT  G +YT+G   C  G LG  N+  L +  ++  P+ GI   V  V+CG  HT
Sbjct: 200 YHSAFVTTEGQLYTFGEPEC--GKLGLPNQ--LLVNHRMPQPVPGIPGKVVQVACGGGHT 255

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            V+T    ++TFG G FG LG G  +   S P+ ++ +K  +    ACG  HTA + ++ 
Sbjct: 256 VVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDM- 313

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCG--HSL 467
                      G ++T+GDG  G+LG G + +  + +PT  +  +      VSCG  H+L
Sbjct: 314 -----------GLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTL 362

Query: 468 TVALTTTGHVYTM 480
             A    G    M
Sbjct: 363 VFATPRLGGTEEM 375



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 35/313 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G+V++ G    G+LG G   + S   LI    
Sbjct: 78  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFT 137

Query: 284 NI-NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +   ++ ++ G + + A+T  G+++ WG ++   G +G  N  ++ +P+++     G  +
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSE--GQIGLENVTNVCVPQQVT---VGKPI 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ GQL+TFG+   G LG  +++ V+   P+ V  + G + V+ ACG
Sbjct: 193 SWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G       VP  +  + +    
Sbjct: 252 GGHTVVLTEKAV-------------YTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF----VEE 512
            ++CG + T  +T  G +YT G   +G+LG   +   N  +PT     L  NF    V+ 
Sbjct: 299 FIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPT-----LCSNFLRFIVQL 353

Query: 513 IACGDYHVAVLTS 525
           ++CG  H  V  +
Sbjct: 354 VSCGGCHTLVFAT 366



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--P 276
            ++ VPKA+E      +  IACG  H AL+T  G ++++G+   G+LG G+++  +   P
Sbjct: 281 FETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIP 340

Query: 277 KLIDALKNINVELVACGEHHT 297
            L        V+LV+CG  HT
Sbjct: 341 TLCSNFLRFIVQLVSCGGCHT 361


>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
          Length = 539

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 168/352 (47%), Gaps = 23/352 (6%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           +  VP  + +   +  + I     H+  +T +GE  +WG     RLGHG  S    P+ I
Sbjct: 197 NKMVPTMIAATRDVLFRKIDSLSTHSIAITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTI 256

Query: 280 DALK-NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGP- 336
           + L     V  +ACG  HT A+  SG++Y WG GSN   GL G  N+ S   P + NG  
Sbjct: 257 EFLSLKGRVRDLACGLGHTLALIESGELYAWGNGSNGRLGL-GDTNDRSS--PTRSNGAS 313

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
           +  +    + CG  H+  ++  G+ + +G    G  GHG      T +E++S +      
Sbjct: 314 IAPVRFRHIFCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGE 373

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DRGR------LGHGDKEARLVPT 448
               V + A   E  +  ++S     G++++ G G  D  R      LGHGD + RL PT
Sbjct: 374 EEEFVVYAAGGWEHTLFCTAS-----GRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPT 428

Query: 449 CVAAL--VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKL 505
            V AL        +V+CG   ++A+T  G VYT GS   G+LG   + +  +PT V    
Sbjct: 429 SVQALDDTHEEVVKVACGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIPTLVRCMD 488

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            K  V++   G  H   LT   E++T G+G +GRLGHGD+  R  P+ +E  
Sbjct: 489 GKK-VKDAKAGCEHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPTKIELF 539



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 156/356 (43%), Gaps = 48/356 (13%)

Query: 252 GEVFSWGEELGGRLGHGVDSDVSH-----------PKLIDALKNINVELVACGEHHTCAV 300
           G + S+G+   G+LGHG  S VS            P +I A +++    +     H+ A+
Sbjct: 166 GYLMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMVPTMIAATRDVLFRKIDSLSTHSIAI 225

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           T  G+   WG  N +   LGHG+    + P+ +        V  ++CG  HT  +  +G+
Sbjct: 226 TAKGEAMAWG--NGDKYRLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGHTLALIESGE 283

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVD--SLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
           L+ +G+G+ G LG GD    S+P   +  S+  +R     CG  H+  +           
Sbjct: 284 LYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGL----------- 332

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN-------FCQVSCGHSLTVAL 471
               G+ + WG  ++G+ GHG    +     + +  +             + G   T+  
Sbjct: 333 -SWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFC 391

Query: 472 TTTGHVYTMGS-----------PVYGQLGDPKANGKLPTRVEG-KLTKNFVEEIACGDYH 519
           T +G VY+ G            PV G  GD     K PT V+    T   V ++ACG  H
Sbjct: 392 TASGRVYSCGCGYKDSRRAGIPPVLGH-GDCDRRLK-PTSVQALDDTHEEVVKVACGWDH 449

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              +T+   VYTWG GANG+LGHGD +  + P+LV  +  K+VK    G   T  +
Sbjct: 450 SLAVTANGRVYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKDAKAGCEHTVFL 505


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 167/347 (48%), Gaps = 36/347 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RH+ L+     V S G+   G+LG         P+ I AL+ + V+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG GS    G +G   E+S + PKK+   L  I +  VSCG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKIMT-LNDIKIIQVSCGHYHSLALSK 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             Q+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
            S C  G  F WG    G+L    +   +    P  V AL       +SCG + T  LT 
Sbjct: 197 -SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253

Query: 474 TGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTE 528
            G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A + +  +
Sbjct: 254 DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308

Query: 529 VYTWGKGAN--GRLGHGDTDDRNF--PSLV--EALKDKQVKSIVCGT 569
           V ++G G +   +  H +    NF    L+  E   D QVK I  GT
Sbjct: 309 VVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT 355



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 134/278 (48%), Gaps = 28/278 (10%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKG------LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDV 192
           +CG     +S G  GR G  +G       + +T  V L S     S    H      G V
Sbjct: 46  SCGD----NSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHK-----GRV 96

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           F WG    +G LG G          K  SF PK + +   + +  ++CG  H+  ++K  
Sbjct: 97  FAWG-AGSEGQLGIG--------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDS 147

Query: 253 EVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           +VFSWG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + W G
Sbjct: 148 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW-G 206

Query: 312 SNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
           SN    L   G  + +   K L+ G L+ + V  +SCG  HTAV+T  G++FTFGD   G
Sbjct: 207 SNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSG 266

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            LG+        P+ V+ + GL + +  CG +HT A V
Sbjct: 267 QLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYV 303



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L +  
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   + P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  + G+L   G       N P  V ALK+  V  I CG +
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)

Query: 174 VSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
           ++  + G  H    SL G  F WG  +      G +  SG    V + S  P +V +   
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSA-----GQLALSGR--NVPVQSNKPLSVGALKN 235

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L V  I+CG  H A++T+ G+VF++G+   G+LG+    +   P+L++ +  + V  + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294

Query: 293 GEHHTCA-VTLSGDMYTWG 310
           G +HT A V  +G + ++G
Sbjct: 295 GSYHTLAYVHTTGQVVSFG 313


>gi|302854088|ref|XP_002958555.1| hypothetical protein VOLCADRAFT_69571 [Volvox carteri f.
           nagariensis]
 gi|300256130|gb|EFJ40404.1| hypothetical protein VOLCADRAFT_69571 [Volvox carteri f.
           nagariensis]
          Length = 201

 Score =  129 bits (323), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 102/186 (54%), Gaps = 7/186 (3%)

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
           V  A+ +DV  +AC  RHAAL+T+ GE+++WG    G LGHG   DV  P+L+  +    
Sbjct: 3   VGEAISVDVSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGRG 62

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP--LEGIHVSS 344
           V  VACGE  + A++    ++ WG      G LG+G       P  +  P   + + V +
Sbjct: 63  VRAVACGEGASAAISAEQRLFMWGKGIA--GQLGNGYAFPCAEPAPVIFPGLRDDVKVLA 120

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS---LKGLRTVRAACGV 401
           VSCGP+HTA +T  G L+T+G+G FG LGHG +     PR       L+    +  +CG 
Sbjct: 121 VSCGPYHTAAITEGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPLEDKYVINVSCGY 180

Query: 402 WHTAAV 407
           WHTAAV
Sbjct: 181 WHTAAV 186



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 101/206 (49%), Gaps = 33/206 (16%)

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLW---LPK-K 332
           L+    +++V  VAC   H   +T +G++YTWG G + N   LGHG     W   +PK +
Sbjct: 2   LVGEAISVDVSRVACAPRHAALITRNGELYTWGVGKDGN---LGHG-----WCGDVPKPR 53

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 392
           L   + G  V +V+CG   +A +++  +LF +G G  G LG+G     + P  V    GL
Sbjct: 54  LLTRMGGRGVRAVACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAEPAPV-IFPGL 112

Query: 393 R----TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
           R     +  +CG +HTAA+ E             G L+TWG+G  GRLGHG +     P 
Sbjct: 113 RDDVKVLAVSCGPYHTAAITE------------GGLLYTWGNGLFGRLGHGTQRDEYRPR 160

Query: 449 CVAA---LVEPNFCQVSCGHSLTVAL 471
             A    L +     VSCG+  T A+
Sbjct: 161 RCAGSFPLEDKYVINVSCGYWHTAAV 186



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 20/198 (10%)

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 392
           L G    + VS V+C P H A++T  G+L+T+G G  G LGHG    V  PR +  + G 
Sbjct: 2   LVGEAISVDVSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGG- 60

Query: 393 RTVRA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE--ARLVPTC 449
           R VRA ACG   +AA+             +  +LF WG G  G+LG+G     A   P  
Sbjct: 61  RGVRAVACGEGASAAI------------SAEQRLFMWGKGIAGQLGNGYAFPCAEPAPVI 108

Query: 450 VAALVEP-NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGK--L 505
              L +      VSCG   T A+T  G +YT G+ ++G+LG      +  P R  G   L
Sbjct: 109 FPGLRDDVKVLAVSCGPYHTAAITEGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPL 168

Query: 506 TKNFVEEIACGDYHVAVL 523
              +V  ++CG +H A +
Sbjct: 169 EDKYVINVSCGYWHTAAV 186



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 58/186 (31%), Positives = 80/186 (43%), Gaps = 18/186 (9%)

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
           R AC   H A +              +G+L+TWG G  G LGHG       P  +  +  
Sbjct: 13  RVACAPRHAALITR------------NGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGG 60

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA---NGKLPTRVEGKLTKNFVEE 512
                V+CG   + A++    ++  G  + GQLG+  A       P    G      V  
Sbjct: 61  RGVRAVACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPGLRDDVKVLA 120

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA---LKDKQVKSIVCGT 569
           ++CG YH A +T    +YTWG G  GRLGHG   D   P        L+DK V ++ CG 
Sbjct: 121 VSCGPYHTAAITEGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPLEDKYVINVSCGY 180

Query: 570 SFTAAI 575
             TAA+
Sbjct: 181 WHTAAV 186



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 4/90 (4%)

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V  +AC   H A++T   E+YTWG G +G LGHG   D   P L+  +  + V+++ CG 
Sbjct: 11  VSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGRGVRAVACGE 70

Query: 570 SFTAAIC----LHKWVSGVDQSMCSGCRIP 595
             +AAI     L  W  G+   + +G   P
Sbjct: 71  GASAAISAEQRLFMWGKGIAGQLGNGYAFP 100


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 177/390 (45%), Gaps = 45/390 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G ++ WG   G+G LG G H  GS +        P  V+  +  DV  ++ G  H+A + 
Sbjct: 271 GTLWTWGH-GGNGRLGLG-HNRGSLS--------PAVVDYILDRDVVFVSAGDSHSACID 320

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           +QG +++WG    GRLGHG   ++  P+ ++    + V  VACG  HT A+T  G ++ W
Sbjct: 321 RQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAW 380

Query: 310 G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           G G     G    G    + +PK L+  +E + V +V+ GP+H+A VT  G L  +G G 
Sbjct: 381 GAGLALGLGEGEDGGGGMVTVPKHLSD-IE-VAVLNVAAGPYHSAAVTVGGDLLVWGVGG 438

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
              LGHGD+ +   P+ V  L+    V          A ++ M+G S      S      
Sbjct: 439 SSRLGHGDQQNQPFPKYVADLRNRMYV----------ADLQSMLGVSRLRRDYS------ 482

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
              D   LG     A       A         + CG + TVALT TG V+  GS   GQL
Sbjct: 483 ---DFDVLGESAGGAG------ANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQL 533

Query: 489 G---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           G     + +   P +++   T   +  IACG  H   +    +V+ WG   +G+LG G  
Sbjct: 534 GLGEQVEEDQYEPVKLDCFSTP--IRRIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVL 591

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                P+ V AL  +Q   + CG  ++A I
Sbjct: 592 RPSFEPAAVTAL--RQAIDVFCGDDYSACI 619



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 212/520 (40%), Gaps = 96/520 (18%)

Query: 139 ACGSVNSLSSGGSDGR----TGHLKG-LSGDTFRVSLSSAVSSSSQGSGHDDG-DSLGDV 192
           AC S  +L + G  G      GH +G LS       L   V   S G  H    D  G +
Sbjct: 266 ACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQGVL 325

Query: 193 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 252
           + WG         GG  R G   G + +  VP+ VE    + V  +ACG  H   +T +G
Sbjct: 326 YTWGS--------GGFGRLGH--GDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKG 375

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL--VACGEHHTCAVTLSGDMYTWG 310
            VF+WG  L   LG G D       +   L +I V +  VA G +H+ AVT+ GD+  WG
Sbjct: 376 TVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWG 435

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS--------------------------- 343
               +   LGHG++ +   PK +      ++V+                           
Sbjct: 436 VGGSS--RLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGG 493

Query: 344 -----------SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST--PREVDSLK 390
                      S+ CG  HT  +T  G ++ +G    G LG G+++      P ++D   
Sbjct: 494 AGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFS 553

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
                R ACG  H  AV +             G +F WG  D G+LG G       P  V
Sbjct: 554 -TPIRRIACGSKHCLAVAQY------------GDVFAWGANDDGQLGLGVLRPSFEPAAV 600

Query: 451 AALVEP---------NFCQVSCGHSLTVAL-----TTTGHVYTMGSPVYGQLG--DPKAN 494
            AL +          + C  S G + TV+L     T  G ++T G+   G+LG  +  A+
Sbjct: 601 TALRQAIDVFCGDDYSACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVAS 660

Query: 495 GKLPTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
           G + T  +   +   V   AC  G  H   +T+R E Y WG G  GRLG G T +   P+
Sbjct: 661 GSILTPQKVPFS---VPVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPT 717

Query: 553 LVEALKDKQVKSIVCGTSFTAAICL--HKWVSGVDQSMCS 590
             +  K  +++S+  G S + A+ +    W+ G  +  CS
Sbjct: 718 KCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKKEDTCS 757



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 163/373 (43%), Gaps = 61/373 (16%)

Query: 235 VQNIACGGRHAALVTKQ-----GEVFSWGEELGGRLGH------------GVDSD----- 272
           V  ++CG  ++A++ K+     G+V+++G    GRLG+            G D+      
Sbjct: 104 VFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQED 163

Query: 273 -----VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL 327
                   P  +       +  ++CG  HT A++  G +Y WG  +  +G LG G+    
Sbjct: 164 GPSWFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGS--YGNLGQGDTSDA 221

Query: 328 WLPKK-LNGPLEG-----------------IHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           + P + L G  +G                 + V+  + G  H+   TS G L+T+G G  
Sbjct: 222 YSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGN 281

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LG G      +P  VD +     V  + G  H+A +               G L+TWG
Sbjct: 282 GRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDR------------QGVLYTWG 329

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            G  GRLGHGD+    VP  V         QV+CG   T+ALT  G V+  G+ +   LG
Sbjct: 330 SGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLG 389

Query: 490 DPKANGKLPTRVEGKLT--KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           + +  G     V   L+  +  V  +A G YH A +T   ++  WG G + RLGHGD  +
Sbjct: 390 EGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQN 449

Query: 548 RNFPSLVEALKDK 560
           + FP  V  L+++
Sbjct: 450 QPFPKYVADLRNR 462



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 148/342 (43%), Gaps = 47/342 (13%)

Query: 235 VQNIACGGRHAALVTKQG---EVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELV 290
           V+ +A G  H  +V  +G   ++ +WG+     LG GV++ +   P L+       V  V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEV 107

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK-----------------KL 333
           +CG +++  +         GG    FGL   GN   L  PK                 + 
Sbjct: 108 SCGTNNSAVLVKRAQQS--GGKVYTFGL---GNRGRLGYPKSKAEGGARQQGDDAGDGQE 162

Query: 334 NGP------------LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 381
           +GP             +   ++ +SCG  HT  ++  G L+ +G G++G LG GD     
Sbjct: 163 DGPSWFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAY 222

Query: 382 TPREV--DSLKGLRTVRAACGVWHT----AAVVEVMVGSSSSSNCSS-GKLFTWGDGDRG 434
           +P  V   S KG    +   G+         V     G+  S  C+S G L+TWG G  G
Sbjct: 223 SPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNG 282

Query: 435 RLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKA 493
           RLG G     L P  V  +++ +   VS G S +  +   G +YT GS  +G+LG   + 
Sbjct: 283 RLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQG 342

Query: 494 NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
              +P +VEG      V ++ACG +H   LT +  V+ WG G
Sbjct: 343 EIPVPRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAG 383



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 153/364 (42%), Gaps = 84/364 (23%)

Query: 190 GDVFIWGECTGDGILGGGIH-RSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           G V++WG    +G LG G       Y  VK+D F            ++ IACG +H   V
Sbjct: 520 GAVWVWGS-NDEGQLGLGEQVEEDQYEPVKLDCFSTP---------IRRIACGSKHCLAV 569

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-INVELVACGEHHTCAVTLS---- 303
            + G+VF+WG    G+LG GV      P  + AL+  I+   V CG+ ++  +T +    
Sbjct: 570 AQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAID---VFCGDDYSACITSNGGAQ 626

Query: 304 ------------GDMYTWGGSNCNFGLLGHGNEM---SLWLPKKLNGPLEGIHVSSVSCG 348
                       GD++TWG +    G LG G ++   S+  P+K+  P   + V + S G
Sbjct: 627 TVSLALESGTEFGDLWTWGAAES--GKLGLGEDVASGSILTPQKV--PFS-VPVCACSLG 681

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             H   +T+ G+ + +G G +G LG G   +   P + D  KG+R    A G  H+ A+ 
Sbjct: 682 TSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALS 741

Query: 409 ---EVMVGSSSSSNCS-------------------------------------SGKLFTW 428
              ++ +       CS                                     +G++F W
Sbjct: 742 MDGDLWIWGKKEDTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAW 801

Query: 429 GDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQ-VSCGHSLTVALTTTGHVYTMGSPVY 485
           GD    + G G ++A  +  P  +A L  PN CQ V+ G   +  +  +G VY  G    
Sbjct: 802 GDNKLYQTGCGKRQAERLDRPEMIAGL--PNVCQWVATGPQASFFVLCSGEVYAAGVING 859

Query: 486 GQLG 489
           G+LG
Sbjct: 860 GRLG 863



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 134/346 (38%), Gaps = 63/346 (18%)

Query: 279 IDALKNINVELVACGEHHTCAVTLSGD---MYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           I  L   +V+ VA G +HT  V L GD   +  WG +  N  +LG G E    +   L  
Sbjct: 40  IARLGPTSVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNN--VLGLGVETRERVFPGLVP 97

Query: 336 PLEGIHVSSVSCGPWHTAVVT-----SAGQLFTFGDGTFGVLGH---------------- 374
                 V  VSCG  ++AV+      S G+++TFG G  G LG+                
Sbjct: 98  FFSRHGVFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDA 157

Query: 375 ------GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
                 G       P  V      +  R +CG  HT A+ +             G L+ W
Sbjct: 158 GDGQEDGPSWFTPKPARVRFRDKCKIARISCGADHTLALSD------------GGALYAW 205

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEP----------------NFCQVSC---GHSLTV 469
           G G  G LG GD      P  V    E                 +   V+C   G   ++
Sbjct: 206 GVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSM 265

Query: 470 ALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           A T+ G ++T G    G+LG     G L   V   +    V  ++ GD H A +  +  +
Sbjct: 266 ACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQGVL 325

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           YTWG G  GRLGHGD  +   P  VE      V  + CGT  T A+
Sbjct: 326 YTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLAL 371



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 134/333 (40%), Gaps = 67/333 (20%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVAC 292
           +Q++ CG  H   +T  G V+ WG    G+LG G  V+ D   P  +D   +  +  +AC
Sbjct: 503 LQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCF-STPIRRIAC 561

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G  H  AV   GD++ WG ++   G LG G     + P  +    + I    V CG  ++
Sbjct: 562 GSKHCLAVAQYGDVFAWGANDD--GQLGLGVLRPSFEPAAVTALRQAI---DVFCGDDYS 616

Query: 353 AVVTS----------------AGQLFTFGDGTFGVLGHGDRI---SVSTPREVDSLKGLR 393
           A +TS                 G L+T+G    G LG G+ +   S+ TP++V     + 
Sbjct: 617 ACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPF--SVP 674

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
               + G  H  A+             + G+ + WG G  GRLG G       PT     
Sbjct: 675 VCACSLGTSHALAIT------------ARGECYAWGAGYYGRLGIGTTANAYAPTKCDFP 722

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMG------------SP-VYGQLGDPKANGKLPTR 500
                  V+ G S ++AL+  G ++  G            SP ++ QL  P    K    
Sbjct: 723 KGVRIRSVAAGASHSLALSMDGDLWIWGKKEDTCSTTNYNSPRIFMQLESPSGVPK---- 778

Query: 501 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
                    V+ IA  ++H   +T   EV+ WG
Sbjct: 779 ---------VKSIAAAEHHSLAVTETGEVFAWG 802



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 122/297 (41%), Gaps = 35/297 (11%)

Query: 161 LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMD 220
             GD +   ++S   + +     + G   GD++ WG      +  G    SGS       
Sbjct: 610 FCGDDYSACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSI------ 663

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
              P+ V  +V   V   + G  HA  +T +GE ++WG    GRLG G  ++   P   D
Sbjct: 664 -LTPQKVPFSV--PVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCD 720

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGG-----SNCNFGLLGHGNEMSLWLPKKLNG 335
             K + +  VA G  H+ A+++ GD++ WG      S  N+      N   +++  +L  
Sbjct: 721 FPKGVRIRSVAAGASHSLALSMDGDLWIWGKKEDTCSTTNY------NSPRIFM--QLES 772

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
           P     V S++    H+  VT  G++F +GD      G G R +    R  + + GL  V
Sbjct: 773 PSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQAERLDRP-EMIAGLPNV 831

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG--DKEARLVPTCV 450
              C    T       V         SG+++  G  + GRLG G   ++ +  P  V
Sbjct: 832 ---CQWVATGPQASFFV-------LCSGEVYAAGVINGGRLGTGWSKRKYQFAPAAV 878


>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
          Length = 425

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 174/366 (47%), Gaps = 50/366 (13%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKLIDALKNINVELVACG 293
           ++ACGG H   +T+ G VF+ G    G+LG  + S V+H   P  +       VE V+ G
Sbjct: 77  SLACGGAHTLFLTESGRVFAAGLNDFGQLG--IGSSVTHSLEPIEVSGFDEKVVE-VSAG 133

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCGPWH 351
            HH+CAVT  G ++ WG ++   G LG G      +  P+K++  L    V  V+ G  H
Sbjct: 134 NHHSCAVTADGKLFAWGRNSS--GQLGLGKRAGKVVSTPRKVD-CLADARVKMVALGSEH 190

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISV---------STPREVDSLKGLRTVRAACGVW 402
           +   T  G++ ++G    G LGHG + S+          TPR + +L G++  R A G+ 
Sbjct: 191 SIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGML 250

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
           H+A + E             G LF +G       G    E R  PT V  +  P   +V+
Sbjct: 251 HSACIDE------------KGTLFIFGQKTEKGFGRSGDELR--PTVVEEV--PFSEEVA 294

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVA 521
           CG   T  +T +G +Y+ GS   G LG    +  + P  ++  L K  V +++CG  H A
Sbjct: 295 CGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTA 354

Query: 522 VLTSRTEVYTWGKG------------ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V+ S  ++YTWG G            + G+LGHG+  D   P +VE  K+ +   + CG 
Sbjct: 355 VI-SGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGF 413

Query: 570 SFTAAI 575
           + T AI
Sbjct: 414 NHTGAI 419



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 119/232 (51%), Gaps = 20/232 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+V  WG   G G LG G   S     +    + P+ +++   + ++ IA G  H+A + 
Sbjct: 198 GEVLSWG-AAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACID 256

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           ++G +F +G++     G G   D   P +++ +     E VACG +HTC VT SGD+Y+W
Sbjct: 257 EKGTLFIFGQKT--EKGFGRSGDELRPTVVEEVPF--SEEVACGGYHTCVVTDSGDLYSW 312

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---- 365
           G SN N G LG G    +  P+ L   L    VS VSCG  HTAV+ S G ++T+G    
Sbjct: 313 G-SNEN-GCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI-SGGDIYTWGWGGA 369

Query: 366 DGTF--------GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           +GTF        G LGHG+ +    P  V+  K  R V  +CG  HT A+ E
Sbjct: 370 NGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFE 421



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 129/335 (38%), Gaps = 83/335 (24%)

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG-------IHVSSVSCGPWHTAVVTSAGQL 361
           WG  N ++G LG G   S W P      L G          +S++CG  HT  +T +G++
Sbjct: 37  WG--NGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRV 94

Query: 362 FTFGDGTFGVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           F  G   FG LG G  ++ S  P EV      + V  + G  H+ AV             
Sbjct: 95  FAAGLNDFGQLGIGSSVTHSLEPIEVSGFD-EKVVEVSAGNHHSCAVT------------ 141

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
           + GKLF WG    G+LG G +  ++V  P  V  L +     V+ G   ++A T  G V 
Sbjct: 142 ADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVL 201

Query: 479 TMGSPVYGQLGDPKANGKLPTRVEG-----KLTKNF------------------------ 509
           + G+   G+LG       L   +       +L KN                         
Sbjct: 202 SWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTL 261

Query: 510 ----------------------VEEI------ACGDYHVAVLTSRTEVYTWGKGANGRLG 541
                                 VEE+      ACG YH  V+T   ++Y+WG   NG LG
Sbjct: 262 FIFGQKTEKGFGRSGDELRPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLG 321

Query: 542 HGDTDDRNFPSLVE-ALKDKQVKSIVCGTSFTAAI 575
            G TD    P +++ +L    V  + CG   TA I
Sbjct: 322 LGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI 356


>gi|168058994|ref|XP_001781490.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667031|gb|EDQ53670.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 489

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 154/323 (47%), Gaps = 29/323 (8%)

Query: 230 AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVE 288
           A    +  I+    HAA VT+ G+V+++G+ +    G G     +S P L+  L+    +
Sbjct: 157 AAATRIVQISANFNHAAFVTESGQVYTFGDNVSCCCGVGESGQPISKPTLVTTLERNPCQ 216

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 347
            V+ G+ +T A+T +G++++WG   CN  G LG GN    + P+++    E   V+ VS 
Sbjct: 217 QVSTGQGYTVALTRNGELFSWG---CNSHGQLGQGNTQEQFRPRQIEEFNESNPVAQVSA 273

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD--SLKGLRTVRAACGVWHTA 405
           G  HT  VT +GQLF++G G+   LGH D ++   P+ V+      L  + AA G  H+A
Sbjct: 274 GICHTLAVTKSGQLFSWGYGSNYCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDEHSA 333

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
           A+             S G ++TWG G  G LGHG    +  P  VAAL      QV    
Sbjct: 334 AID------------SLGYVYTWGKGYCGALGHGAGTDQRTPLVVAALKSTRAVQVVARR 381

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGK-------LPTRVEGKLTKNFVEEIACGDY 518
             T  L   G V++ G   Y  LG     GK        P  ++  L  + V  IA G Y
Sbjct: 382 RKTFVLGDNGTVHSFGWMAYHSLG---VQGKSASDTVVSPQSLDLALHGHKVSTIAAGMY 438

Query: 519 HVAVLTSRTEVYTWGKGANGRLG 541
           H  V+T +  ++ +G   + +LG
Sbjct: 439 HTLVITRKGAIFGFGDNDSSQLG 461



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 131/283 (46%), Gaps = 20/283 (7%)

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEGIHVSSVSC 347
           LVA G +HT  V   G++Y  G       +LG    +S L  P  +  P     +  +S 
Sbjct: 111 LVAAGRYHTLLVDRKGELYACGTGG---SVLGQNPAVSNLQRPASIPLPAAATRIVQISA 167

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAA 406
              H A VT +GQ++TFGD      G G+    +S P  V +L+     + + G  +T A
Sbjct: 168 NFNHAAFVTESGQVYTFGDNVSCCCGVGESGQPISKPTLVTTLERNPCQQVSTGQGYTVA 227

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN-FCQVSCGH 465
           +              +G+LF+WG    G+LG G+ + +  P  +    E N   QVS G 
Sbjct: 228 LTR------------NGELFSWGCNSHGQLGQGNTQEQFRPRQIEEFNESNPVAQVSAGI 275

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVE-GKLTKNFVEEIACGDYHVAVL 523
             T+A+T +G +++ G      LG      +L P RVE G     F+   A GD H A +
Sbjct: 276 CHTLAVTKSGQLFSWGYGSNYCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDEHSAAI 335

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
            S   VYTWGKG  G LGHG   D+  P +V ALK  +   +V
Sbjct: 336 DSLGYVYTWGKGYCGALGHGAGTDQRTPLVVAALKSTRAVQVV 378



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 26/211 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV----PKAVESAVVLDVQNI--ACGGR 243
           G +F WG               GS   +  D F+    PK VE     D+  I  A G  
Sbjct: 285 GQLFSWGY--------------GSNYCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDE 330

Query: 244 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
           H+A +   G V++WG+   G LGHG  +D   P ++ ALK+     V      T  +  +
Sbjct: 331 HSAAIDSLGYVYTWGKGYCGALGHGAGTDQRTPLVVAALKSTRAVQVVARRRKTFVLGDN 390

Query: 304 GDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           G ++++G  +  + G+ G     ++  P+ L+  L G  VS+++ G +HT V+T  G +F
Sbjct: 391 GTVHSFGWMAYHSLGVQGKSASDTVVSPQSLDLALHGHKVSTIAAGMYHTLVITRKGAIF 450

Query: 363 TFGDGTFGVLG-----HGDRISVSTPREVDS 388
            FGD     LG     +   ++V  P EV S
Sbjct: 451 GFGDNDSSQLGPVSVTNETPLAVRIPAEVFS 481


>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
           boliviensis boliviensis]
          Length = 1170

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 168/353 (47%), Gaps = 55/353 (15%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +++CG  H+A+VT   +++ +G    G+LG G  S VS P  + ALK   V+L ACG +H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNE--------MSLWLPKKLNGPLEGIHVSSVSCG 348
           T   T  G++Y  GG+  + G LG G+         +S + P+          +  +S G
Sbjct: 99  TLVSTEGGNVYATGGN--DEGQLGLGDTEERTTFHLISFFTPQH--------KIKQLSAG 148

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
              +A +T  G+LF +GD + G +G  D  +   P +V + K +  +  +CG +H+A V 
Sbjct: 149 SNTSAALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTTGKPVSWI--SCGYYHSAFVT 206

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLG--HGDKEARLVPTCVAALVEPNFCQVSCGHS 466
                       + G+L+ +G+ + G+LG  +       +P  V  + E    QV+CG  
Sbjct: 207 ------------TDGELYIFGEPENGKLGLPYELLSNHRIPQLVPEIPE-KVIQVACGGE 253

Query: 467 LTVALTTTGHVYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNFVEEIACGD 517
            +V LT    +YT G   +GQLG         +P        RV   +    +  I+CG+
Sbjct: 254 HSVVLTEN-DLYTFGLGKFGQLGLGTFLFETSEP--------RVVESIKGRKISYISCGE 304

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
            H A+LT    +YT+G G +G+LG    +  N   P L   L   +VK + CG
Sbjct: 305 NHAALLTDTGLMYTFGDGRHGKLGLELENFTNQFIPILCSYLLKYKVKLVACG 357



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 140/313 (44%), Gaps = 35/313 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + +   LI    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHLISFFT 137

Query: 284 -NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
               ++ ++ G + + A+T  G ++ WG +  + G +G  +  +  +P ++     G  V
Sbjct: 138 PQHKIKQLSAGSNTSAALTEDGRLFMWGDN--SEGQIGLPDMPNACVPHQVT---TGKPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG------HGDRISVSTPREVDSLKGLRTVR 396
           S +SCG +H+A VT+ G+L+ FG+   G LG         RI    P   +     + ++
Sbjct: 193 SWISCGYYHSAFVTTDGELYIFGEPENGKLGLPYELLSNHRIPQLVPEIPE-----KVIQ 247

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVE 455
            ACG  H+  + E               L+T+G G  G+LG G        P  V ++  
Sbjct: 248 VACGGEHSVVLTE-------------NDLYTFGLGKFGQLGLGTFLFETSEPRVVESIKG 294

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEE 512
                +SCG +    LT TG +YT G   +G+LG   +   N  +P      L K  V+ 
Sbjct: 295 RKISYISCGENHAALLTDTGLMYTFGDGRHGKLGLELENFTNQFIPILC-SYLLKYKVKL 353

Query: 513 IACGDYHVAVLTS 525
           +ACG  H+ V  +
Sbjct: 354 VACGGCHMVVFAA 366



 Score = 46.2 bits (108), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G     + P+ V+ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99


>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
 gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
            SB210]
          Length = 1984

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 189/418 (45%), Gaps = 51/418 (12%)

Query: 187  DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
            D++G +F WG+ T +G +G       +    K+    PK +       V ++ACG +H+ 
Sbjct: 1497 DAVGVMFSWGQNT-EGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSV 1555

Query: 247  LVTKQGEVFSWGEELGGRLGHGVD--SDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
             +T  G V +WG+    +LG G    S V  P  I AL NI  + V+CG  HT A+   G
Sbjct: 1556 AITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNI--QSVSCGSEHTLALDYIG 1613

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
             +++WG  N   GLLGHGNE     PK +   L+G++V  + CG  H+ V+T   Q++++
Sbjct: 1614 QVFSWG--NGEGGLLGHGNEDVCPSPKIIEA-LKGLNVDFIVCGGLHSLVLTKNRQVYSW 1670

Query: 365  GDGTFGVLGHGDRI------SVSTPREVD-SLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G    G LG   ++       ++TP+ V  +L+G+  ++ A G  H+ A+          
Sbjct: 1671 GRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLAL---------- 1720

Query: 418  SNCSSGKLFTWGDGDRGRLGHGDK-------EARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                +G+++ WG    G++G G +       E +L+P      +E  FC   CG + +  
Sbjct: 1721 --ALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNK--IEKIFC---CGLNDSNQ 1773

Query: 471  LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF-------VEEIACGDYHVAVL 523
            L        + S     L   K   +     +  + K         V  ++CG  H   L
Sbjct: 1774 LGLEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSLAL 1833

Query: 524  ----TSRTEVYTWGKGANGRLGHGDT-DDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
                T    ++ WG   +G+LG G+T  + + P  +  L+D    S+ CG+  +  + 
Sbjct: 1834 VVADTKHYMLFAWGMHKHGQLGIGETGQNSSVPRPITYLQDVTTYSMACGSYHSLVVA 1891



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 128/260 (49%), Gaps = 27/260 (10%)

Query: 332  KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSL 389
            KL  PL+   V+SV+CG  H+  +T AG +  +GD +   LG G++   SV  P  + +L
Sbjct: 1534 KLIVPLKDTIVTSVACGYQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPAL 1593

Query: 390  KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC 449
              +++V  +CG  HT A+  +            G++F+WG+G+ G LGHG+++    P  
Sbjct: 1594 TNIQSV--SCGSEHTLALDYI------------GQVFSWGNGEGGLLGHGNEDVCPSPKI 1639

Query: 450  VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGK----LPTRVE 502
            + AL   N   + CG   ++ LT    VY+ G    GQLG  K    N K     P RV+
Sbjct: 1640 IEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVK 1699

Query: 503  GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG---DTDDRNFPSLVEALKD 559
            G L    V +IA G+ H   L    +VY WG   NG++G G   DT     P L+  L +
Sbjct: 1700 GNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKL-N 1758

Query: 560  KQVKSIVCGTSFTAAICLHK 579
            K  K   CG + +  + L K
Sbjct: 1759 KIEKIFCCGLNDSNQLGLEK 1778



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 15/167 (8%)

Query: 414  SSSSSNCSSGKLFTWGDGDRGRLGH-GDKEARLV--------PTCVAALVEPNFCQVSCG 464
            S+ S   + G +F+WG    G++G+  D +  L+        P  +  L +     V+CG
Sbjct: 1491 STFSKKDAVGVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACG 1550

Query: 465  HSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
            +  +VA+T  G V   G   + QLG      ++   PT +   LT   ++ ++CG  H  
Sbjct: 1551 YQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPA-LTN--IQSVSCGSEHTL 1607

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
             L    +V++WG G  G LGHG+ D    P ++EALK   V  IVCG
Sbjct: 1608 ALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCG 1654


>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
 gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
          Length = 450

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 167/353 (47%), Gaps = 44/353 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD-VQNIACGGRHAALV 248
           G+++IWG+  G G LG G H +          FVP    +   LD  + +A GG H+  +
Sbjct: 125 GNIWIWGKGDG-GRLGFG-HEN--------PVFVPTLNPN---LDPAKCVALGGVHSVAL 171

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           T  G+VF+WG    G LGH V      P+L+  + N  +  +A    HT A+T +G++YT
Sbjct: 172 TSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYT 231

Query: 309 WGGSNCN-------FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
           WG    +             G  +S  +P K+      + V++V CG + TAV+T  GQ+
Sbjct: 232 WGRDEGDGRLGLGPGRGPNEGGGLS--IPSKVKALT--VPVAAVFCGGFFTAVLTEEGQI 287

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           + +G  +   LG G++     P+ + +L+G+R ++ A G +H+ A+ +            
Sbjct: 288 WNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALTD------------ 335

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            GK+ +WG G  G+LGH   + + +P  + AL +     ++CG S + A+T  G +Y  G
Sbjct: 336 EGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWG 395

Query: 482 SPVYGQLGDPKANGKLPTRVE-------GKLTKNFVEEIACGDYHVAVLTSRT 527
           +    QLG P      P  VE         L  + V  +A G  H   L  RT
Sbjct: 396 NAKDSQLGVPGLPEVQPCPVEVVFLMEDDGLGPHKVLSVAVGASHAMCLVLRT 448



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 166/374 (44%), Gaps = 57/374 (15%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDAL------------------KNINVEL----- 289
           ++ SWG    G+LG G++    +P  +  L                  KN N  +     
Sbjct: 48  QLLSWGRGSSGQLGGGIEETRLYPSPVANLHALPSSFSLSPTPGQLLIKNQNSTITKQEA 107

Query: 290 ----VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
               ++CG  H+ A+ + G+++ WG  +   G LG G+E  +++P  LN  L+      V
Sbjct: 108 IEVGISCGLFHS-ALLVDGNIWIWGKGDG--GRLGFGHENPVFVPT-LNPNLD--PAKCV 161

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 405
           + G  H+  +TS GQ+FT+G G FG LGH        PR V  +   +    A    HTA
Sbjct: 162 ALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHTA 221

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWG--DGDRGRLGH-----GDKEARLVPTCVAALVEPNF 458
           A+ E            +G+++TWG  +GD            +     +P+ V AL  P  
Sbjct: 222 AITE------------TGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVP-V 268

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
             V CG   T  LT  G ++  G+    +LG     G    +    L    V +IA G Y
Sbjct: 269 AAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGY 328

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC-- 576
           H   LT   +V +WG G +G+LGH    ++  P +++AL D++V  I CG S +AAI   
Sbjct: 329 HSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDE 388

Query: 577 --LHKWVSGVDQSM 588
             L+ W +  D  +
Sbjct: 389 GKLYMWGNAKDSQL 402



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 167/392 (42%), Gaps = 60/392 (15%)

Query: 183 HDDGDSLG-DVFIWGECTGDGILGGGIHRSGSYAGVKMD------SFVPKAVESAVVLDV 235
           H+  DS+   +  WG  +  G LGGGI  +  Y     +      SF        +++  
Sbjct: 39  HNRNDSVTLQLLSWGRGS-SGQLGGGIEETRLYPSPVANLHALPSSFSLSPTPGQLLIKN 97

Query: 236 QN------------IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           QN            I+CG  H+AL+   G ++ WG+  GGRLG G ++ V  P L   L 
Sbjct: 98  QNSTITKQEAIEVGISCGLFHSALLV-DGNIWIWGKGDGGRLGFGHENPVFVPTLNPNLD 156

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
               + VA G  H+ A+T  G ++TWG     FG LGH       LP+ + G +    + 
Sbjct: 157 P--AKCVALGGVHSVALTSLGQVFTWG--YGGFGALGHCVYHRELLPRLVQG-ISNEKIR 211

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-------------VSTPREVDSLK 390
            ++    HTA +T  G+++T+G         GD                +S P +V +L 
Sbjct: 212 HIATSGTHTAAITETGEVYTWGRD------EGDGRLGLGPGRGPNEGGGLSIPSKVKALT 265

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
            +      CG + TA + E             G+++ WG      LG G+K     P  +
Sbjct: 266 -VPVAAVFCGGFFTAVLTE------------EGQIWNWGANSNYELGRGNKTGGWQPKPI 312

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNF 509
             L      Q++ G   ++ALT  G V + G   +GQLG P   N K+P  ++  L    
Sbjct: 313 PNLEGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVID-ALADQR 371

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
           V  IACG    A +T   ++Y WG   + +LG
Sbjct: 372 VVYIACGGSTSAAITDEGKLYMWGNAKDSQLG 403


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 124/230 (53%), Gaps = 16/230 (6%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLID 280
           ++P+ +E+   + V  +ACG RH   +TK+G+V++WG+   G+LG G     +S P+ + 
Sbjct: 106 YLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVR 165

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
           +L  + +  V+ G  H+ A+++SG ++ WG ++C  G LG G+      P  ++  L   
Sbjct: 166 SLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDC--GQLGLGDSQDRCTPTSVDS-LNLK 222

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
             +S+SCG  HTA++T  G +FTFG G FG LGH    +   PR V  L G +  R ACG
Sbjct: 223 KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACG 282

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
            +HT  + E            + K++++G  D+ +LG  +     VP  V
Sbjct: 283 RYHTLVLQE------------NNKIYSFGCNDQNQLGRSNDSHPSVPLPV 320



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 28/296 (9%)

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           +E V CG+     ++  G +Y    +             +L+LP+ L      I VS V+
Sbjct: 77  IEAVGCGDDEVILLSEKGSVYRVDVTQ------------ALYLPRMLEAFCR-IPVSQVA 123

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTA 405
           CG  HT  +T  GQ++T+G  + G LG G +  S+S+P+ V SL G+  V+ + G     
Sbjct: 124 CGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAG----- 178

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
                  G  S +   SG +F WG  D G+LG GD + R  PT V +L       +SCG 
Sbjct: 179 -------GDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGK 231

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             T  LT  G V+T GS  +GQLG   +  +L  R+  +L    V  IACG YH  VL  
Sbjct: 232 DHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQE 291

Query: 526 RTEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCGTSFTAAICLHK 579
             ++Y++G     +LG  +    +   P L+  +    +       +F++A CL++
Sbjct: 292 NNKIYSFGCNDQNQLGRSNDSHPSVPLPVLLPQVYKCSLLYREIQRTFSSASCLNR 347



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG+    G LG G        G  + S  P+ V S   + +  ++ GG H+  ++
Sbjct: 136 GQVYTWGQ-NSRGQLGLG------KKGCSISS--PQCVRSLSGMPLVQVSAGGDHSFALS 186

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G VF WG    G+LG G   D   P  +D+L       ++CG+ HT  +T  G ++T+
Sbjct: 187 VSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTF 246

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G     FG LGH +  +   P +L   L G  V+ ++CG +HT V+    ++++FG    
Sbjct: 247 GSG--QFGQLGHNSSRNELRP-RLVAELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQ 303

Query: 370 GVLGHGDRISVSTPREV 386
             LG  +    S P  V
Sbjct: 304 NQLGRSNDSHPSVPLPV 320



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 17/150 (11%)

Query: 178 SQGSGHDDGDSL-GDVFIWG--ECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 234
           S G  H    S+ G VF WG  +C   G LG          G   D   P +V+S  +  
Sbjct: 176 SAGGDHSFALSVSGSVFGWGRNDC---GQLG---------LGDSQDRCTPTSVDSLNLKK 223

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
             +I+CG  H A++TK G VF++G    G+LGH    +   P+L+  L    V  +ACG 
Sbjct: 224 TTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGR 283

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 324
           +HT  +  +  +Y++G ++ N   LG  N+
Sbjct: 284 YHTLVLQENNKIYSFGCNDQN--QLGRSND 311


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 167/346 (48%), Gaps = 36/346 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RHA L+     V S GE   G+LG         P+ + ALK +   LV+CG+ H+ 
Sbjct: 29  ASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNLVSCGKEHSL 88

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG GS    G +G   E++ + PKK+   L GI +  VSCG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAGSEGQLG-IGEFKEIN-FTPKKITT-LTGIKIIQVSCGHYHSLALSK 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             Q+F++G  + G LG G  + S ++P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
            S C  G  F WG    G+L    +  ++    P  + AL       +SCG   T  L+ 
Sbjct: 197 -SLC--GTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQ 253

Query: 474 TGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIAC-GDYHVAVLTSRTE 528
            G V+T G    GQLG    PK  G ++  R++G      V +I C GD+ +A + +  +
Sbjct: 254 DGKVFTFGDNSSGQLGYNPTPKKRGPQIVERIDG-----LVSQIDCGGDHTIAYVHTTGQ 308

Query: 529 VYTWGKGAN--GRLGHGDTDDRNFP--SLVEA--LKDKQVKSIVCG 568
           V ++G G +   +  H +    NF    L+ A  L D QVK I  G
Sbjct: 309 VVSFGHGPSDTSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAG 354



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 130/264 (49%), Gaps = 20/264 (7%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDA 281
           +P+ V++   L    ++CG  H+  V  +G VF+WG    G+LG G   +++  PK I  
Sbjct: 65  LPEPVQALKTLKFNLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITT 124

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L  I +  V+CG +H+ A++    +++WG +  + G LG G E+S     +    LEGI 
Sbjct: 125 LTGIKIIQVSCGHYHSLALSKDSQVFSWGKN--SHGQLGLGKELSSQASPQRVRSLEGIP 182

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL---GHGDRISVSTPREVDSLKGLRTVRAA 398
           V+ V+ G  H+  ++  G  F +G  + G L   G   ++  + P  + +LK L  +  +
Sbjct: 183 VAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYIS 242

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HTA + +             GK+FT+GD   G+LG+     +  P  V   ++   
Sbjct: 243 CGDEHTAVLSQ------------DGKVFTFGDNSSGQLGYNPTPKKRGPQIVER-IDGLV 289

Query: 459 CQVSCGHSLTVALT-TTGHVYTMG 481
            Q+ CG   T+A   TTG V + G
Sbjct: 290 SQIDCGGDHTIAYVHTTGQVVSFG 313



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 130/252 (51%), Gaps = 21/252 (8%)

Query: 329 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVD 387
           LP+ +   L+ +  + VSCG  H+  V   G++F +G G+ G LG G+   ++ TP+++ 
Sbjct: 65  LPEPVQA-LKTLKFNLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKIT 123

Query: 388 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLV 446
           +L G++ ++ +CG +H+ A+ +              ++F+WG    G+LG G +  ++  
Sbjct: 124 TLTGIKIIQVSCGHYHSLALSK------------DSQVFSWGKNSHGQLGLGKELSSQAS 171

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL----PTRVE 502
           P  V +L      QV+ G + + AL+  G  +  GS   GQL     N ++    P  + 
Sbjct: 172 PQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSI- 230

Query: 503 GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQV 562
           G L    V  I+CGD H AVL+   +V+T+G  ++G+LG+  T  +  P +VE + D  V
Sbjct: 231 GALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYNPTPKKRGPQIVERI-DGLV 289

Query: 563 KSIVCGTSFTAA 574
             I CG   T A
Sbjct: 290 SQIDCGGDHTIA 301



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 116/221 (52%), Gaps = 13/221 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG    +G LG G          K  +F PK + +   + +  ++CG  H+  ++
Sbjct: 94  GRVFAWG-AGSEGQLGIG--------EFKEINFTPKKITTLTGIKIIQVSCGHYHSLALS 144

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  +VFSWG+   G+LG G + S  + P+ + +L+ I V  VA G  H+ A++L G  + 
Sbjct: 145 KDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFG 204

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG SN    L   G  + +   K L+ G L+ + V  +SCG  HTAV++  G++FTFGD 
Sbjct: 205 WG-SNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDN 263

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           + G LG+        P+ V+ + GL + +  CG  HT A V
Sbjct: 264 SSGQLGYNPTPKKRGPQIVERIDGLVS-QIDCGGDHTIAYV 303



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 106/243 (43%), Gaps = 19/243 (7%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H  ++ +   + + G+ + G LG         P  V +LK L+    +
Sbjct: 22  GAELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIAC 515
             QVSCGH  ++AL+    V++ G   +GQLG  K  ++   P RV   L    V ++A 
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRS-LEGIPVAQVAA 188

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           G  H   L+     + WG  + G+L   G       N P  + ALK+  V  I CG   T
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHT 248

Query: 573 AAI 575
           A +
Sbjct: 249 AVL 251



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 21/177 (11%)

Query: 136 SESACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSL-GDVFI 194
           S    G    LSS  S  R   L+G+            V+  + G  H    SL G  F 
Sbjct: 156 SHGQLGLGKELSSQASPQRVRSLEGI-----------PVAQVAAGGAHSFALSLCGTSFG 204

Query: 195 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           WG  +      G +  SG    V++ S  P ++ +   L V  I+CG  H A++++ G+V
Sbjct: 205 WGSNSA-----GQLALSGR--NVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKV 257

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 310
           F++G+   G+LG+        P++++ +  + V  + CG  HT A V  +G + ++G
Sbjct: 258 FTFGDNSSGQLGYNPTPKKRGPQIVERIDGL-VSQIDCGGDHTIAYVHTTGQVVSFG 313


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 167/346 (48%), Gaps = 36/346 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RHA L+     V S GE   G+LG         P+ + ALK +  +LV+CG+ H+ 
Sbjct: 29  ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEHSL 88

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG GS    G +G   E++ + P+K+   L GI +  VSCG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAGSEGQLG-VGELKEIN-FTPRKITT-LNGIKIIQVSCGHYHSLALSK 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             Q+F++G  + G LG G    S  +P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
            S C  G  F WG    G+L    +  ++    P  + AL       +SCG   T  L+ 
Sbjct: 197 -SLC--GTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQ 253

Query: 474 TGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIAC-GDYHVAVLTSRTE 528
            G V+T G    GQLG    P+  G +L  R++G      V +I C GD+ +A + +  +
Sbjct: 254 DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGGDHTIAYVHTTGQ 308

Query: 529 VYTWGKG--ANGRLGHGDTDDRNFP--SLVEA--LKDKQVKSIVCG 568
           V ++G+G  A  +  H +    NF    L+ A  L D QVK I  G
Sbjct: 309 VVSFGRGPSATSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAG 354



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 23/290 (7%)

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
           A GE H   + L+  +    G N   G LG        LP+ +   L+ +    VSCG  
Sbjct: 29  ASGERHAL-LLLTNSLVHSCGENSR-GQLGRRGAPRWDLPEPVQA-LKTLKFDLVSCGKE 85

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVE 409
           H+  V   G++F +G G+ G LG G+   ++ TPR++ +L G++ ++ +CG +H+ A+ +
Sbjct: 86  HSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLT 468
                         ++F+WG    G+LG G +  ++  P  V +L      QV+ G + +
Sbjct: 146 ------------DSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHS 193

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKL----PTRVEGKLTKNFVEEIACGDYHVAVLT 524
            AL+  G  +  GS   GQL     N ++    P  + G L    V  I+CGD H AVL+
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALKNLGVIYISCGDEHTAVLS 252

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              +V+T+G  ++G+LG+  T ++  P LVE + D  V  I CG   T A
Sbjct: 253 QDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGGDHTIA 301



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 115/221 (52%), Gaps = 13/221 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG    +G LG G         +K  +F P+ + +   + +  ++CG  H+  ++
Sbjct: 94  GRVFAWG-AGSEGQLGVG--------ELKEINFTPRKITTLNGIKIIQVSCGHYHSLALS 144

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  +VFSWG+   G+LG G +      P+ + +L+ I +  VA G  H+ A++L G  + 
Sbjct: 145 KDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFG 204

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG SN    L   G  + +   K L+ G L+ + V  +SCG  HTAV++  G++FTFGD 
Sbjct: 205 WG-SNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDN 263

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           + G LG+        P+ V+ + GL + +  CG  HT A V
Sbjct: 264 SSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGGDHTIAYV 303



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 105/243 (43%), Gaps = 19/243 (7%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H  ++ +   + + G+ + G LG         P  V +LK L+    +
Sbjct: 22  GAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT--RVEGKLTKNFVEEIAC 515
             QVSCGH  ++AL+    V++ G   +GQLG  K     P+  RV   L    + ++A 
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRS-LEGIPLAQVAA 188

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           G  H   L+     + WG  + G+L   G       N P  + ALK+  V  I CG   T
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHT 248

Query: 573 AAI 575
           A +
Sbjct: 249 AVL 251



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 10/139 (7%)

Query: 174 VSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
           ++  + G  H    SL G  F WG  +      G +  SG    V++ S  P ++ +   
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSA-----GQLALSGR--NVQVQSNKPLSIGALKN 235

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L V  I+CG  H A++++ G+VF++G+   G+LG+    +   P+L++ +  + V  + C
Sbjct: 236 LGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294

Query: 293 GEHHTCA-VTLSGDMYTWG 310
           G  HT A V  +G + ++G
Sbjct: 295 GGDHTIAYVHTTGQVVSFG 313


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 167/346 (48%), Gaps = 36/346 (10%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A G RHA L+     V S GE   G+LG         P+ + ALK +  +LV+CG+ H+ 
Sbjct: 29  ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEHSL 88

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           AV   G ++ WG GS    G +G   E++ + P+K+   L GI +  VSCG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAGSEGQLG-VGELKEIN-FTPRKITT-LNGIKIIQVSCGHYHSLALSK 145

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             Q+F++G  + G LG G    S  +P+ V SL+G+   + A G  H+ A+         
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFAL--------- 196

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 473
            S C  G  F WG    G+L    +  ++    P  + AL       +SCG   T  L+ 
Sbjct: 197 -SLC--GTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQ 253

Query: 474 TGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIAC-GDYHVAVLTSRTE 528
            G V+T G    GQLG    P+  G +L  R++G      V +I C GD+ +A + +  +
Sbjct: 254 DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGGDHTIAYVHTTGQ 308

Query: 529 VYTWGKG--ANGRLGHGDTDDRNFP--SLVEA--LKDKQVKSIVCG 568
           V ++G+G  A  +  H +    NF    L+ A  L D QVK I  G
Sbjct: 309 VVSFGRGPSATSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAG 354



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 23/290 (7%)

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
           A GE H   + L+  +    G N   G LG        LP+ +   L+ +    VSCG  
Sbjct: 29  ASGERHA-LLLLTNSLVHSCGENSR-GQLGRRGAPRWDLPEPVQA-LKTLKFDLVSCGKE 85

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVE 409
           H+  V   G++F +G G+ G LG G+   ++ TPR++ +L G++ ++ +CG +H+ A+ +
Sbjct: 86  HSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLT 468
                         ++F+WG    G+LG G +  ++  P  V +L      QV+ G + +
Sbjct: 146 ------------DSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHS 193

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKL----PTRVEGKLTKNFVEEIACGDYHVAVLT 524
            AL+  G  +  GS   GQL     N ++    P  + G L    V  I+CGD H AVL+
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALKNLGVIYISCGDEHTAVLS 252

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              +V+T+G  ++G+LG+  T ++  P LVE + D  V  I CG   T A
Sbjct: 253 QDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGGDHTIA 301



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 115/221 (52%), Gaps = 13/221 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG    +G LG G         +K  +F P+ + +   + +  ++CG  H+  ++
Sbjct: 94  GRVFAWG-AGSEGQLGVG--------ELKEINFTPRKITTLNGIKIIQVSCGHYHSLALS 144

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  +VFSWG+   G+LG G +      P+ + +L+ I +  VA G  H+ A++L G  + 
Sbjct: 145 KDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFG 204

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           WG SN    L   G  + +   K L+ G L+ + V  +SCG  HTAV++  G++FTFGD 
Sbjct: 205 WG-SNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDN 263

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
           + G LG+        P+ V+ + GL + +  CG  HT A V
Sbjct: 264 SSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGGDHTIAYV 303



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 105/243 (43%), Gaps = 19/243 (7%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H  ++ +   + + G+ + G LG         P  V +LK L+    +
Sbjct: 22  GAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L    
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT--RVEGKLTKNFVEEIAC 515
             QVSCGH  ++AL+    V++ G   +GQLG  K     P+  RV   L    + ++A 
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRS-LEGIPLAQVAA 188

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           G  H   L+     + WG  + G+L   G       N P  + ALK+  V  I CG   T
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHT 248

Query: 573 AAI 575
           A +
Sbjct: 249 AVL 251



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 10/139 (7%)

Query: 174 VSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV 232
           ++  + G  H    SL G  F WG  +      G +  SG    V++ S  P ++ +   
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSA-----GQLALSGR--NVQVQSNKPLSIGALKN 235

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L V  I+CG  H A++++ G+VF++G+   G+LG+    +   P+L++ +  + V  + C
Sbjct: 236 LGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294

Query: 293 GEHHTCA-VTLSGDMYTWG 310
           G  HT A V  +G + ++G
Sbjct: 295 GGDHTIAYVHTTGQVVSFG 313


>gi|390348017|ref|XP_003726917.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Strongylocentrotus
            purpuratus]
          Length = 1514

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 195/418 (46%), Gaps = 47/418 (11%)

Query: 224  PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
            P  +ES     V  +AC  R   ++T+  +V+              +++     L+D L 
Sbjct: 725  PCMLESLSEFGVVQMACSERCLIVLTRTSKVYL----------QYFNNEPPGFHLVDGLS 774

Query: 284  NINVELVAC---GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLE- 338
            N +V  +A    G+H+  A+T   ++Y WG  N   G LG GN  +   P  + G P + 
Sbjct: 775  NKDVIQIAAHPEGKHYL-ALTADWEVYAWG--NGEGGRLGLGNTSAREDPTLVQGLPSQS 831

Query: 339  -GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG---DRISVS---------TPRE 385
             G HV  +SCG  ++A +TS G+++T+G G +G LGHG   D+++           TP+ 
Sbjct: 832  TGQHVIQISCGSSYSAALTSNGEVYTWGRGIYGRLGHGNSDDQLTPKLVSNSDDQLTPKL 891

Query: 386  VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS---SGKLFTWGDGDRGRLGHGDKE 442
            V +     T +   G+      + + +GS+     +   +G LF++G+GD G+LG G  +
Sbjct: 892  VSNSDDQLTPKLVSGL-KEQKFIHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSD 950

Query: 443  ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRV 501
               +P  V  L   +  +  CG+  +V LT TG VYT G     +LG   + + + P  +
Sbjct: 951  GCKLPKLVDKLQGQHAVKACCGNQFSVILTKTGTVYTWGKGDGHRLGHGSEEHQRFPKMI 1010

Query: 502  EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT---DDRNFPSLVEALK 558
            E    K  V+  + G + VA+  S  E + WG+   G+LG G+     ++  P+L+E ++
Sbjct: 1011 EALRGKKIVDIQSSGCHTVAIAES-GEFFCWGRNDQGQLGLGEAALKSNKGEPTLIECME 1069

Query: 559  DKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTC 616
             K++  + CG + T A     W S    S+  G  +PF+    R       L+    C
Sbjct: 1070 GKKLCGLACGVAQTFA-----WTSSAHWSV--GLHVPFSVDVTRTTFEKLDLLLQRVC 1120



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 161/362 (44%), Gaps = 61/362 (16%)

Query: 247  LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
            L+ +  EV+ WG  L      G +   + P ++++L    V  +AC E     +T +  +
Sbjct: 698  LIPQGQEVWGWG--LLPFKTTGSNPTCASPCMLESLSEFGVVQMACSERCLIVLTRTSKV 755

Query: 307  YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTF 364
            Y    +N   G               L   L    V  ++  P   H   +T+  +++ +
Sbjct: 756  YLQYFNNEPPGF-------------HLVDGLSNKDVIQIAAHPEGKHYLALTADWEVYAW 802

Query: 365  GDGTFGVLGHGDRISVSTPREVDSL----KGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
            G+G  G LG G+  +   P  V  L     G   ++ +CG  ++AA+             
Sbjct: 803  GNGEGGRLGLGNTSAREDPTLVQGLPSQSTGQHVIQISCGSSYSAALT------------ 850

Query: 421  SSGKLFTWGDGDRGRLGHGDKEARLVPTCVA------------------------ALVEP 456
            S+G+++TWG G  GRLGHG+ + +L P  V+                         L E 
Sbjct: 851  SNGEVYTWGRGIYGRLGHGNSDDQLTPKLVSNSDDQLTPKLVSNSDDQLTPKLVSGLKEQ 910

Query: 457  NFCQVSCGHS--LTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEI 513
             F  ++ G +   T+A+T TG +++ G+  YG+LG   ++G KLP  V+ KL      + 
Sbjct: 911  KFIHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVD-KLQGQHAVKA 969

Query: 514  ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
             CG+    +LT    VYTWGKG   RLGHG  + + FP ++EAL+ K++  I      T 
Sbjct: 970  CCGNQFSVILTKTGTVYTWGKGDGHRLGHGSEEHQRFPKMIEALRGKKIVDIQSSGCHTV 1029

Query: 574  AI 575
            AI
Sbjct: 1030 AI 1031



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 21/186 (11%)

Query: 182  GHDDGDSL-----GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQ 236
            G +DG +L     G +F +G   GD    G + R GS  G K+    PK V+        
Sbjct: 918  GSNDGQTLAVTDTGLLFSFG--NGDY---GKLGRGGS-DGCKL----PKLVDKLQGQHAV 967

Query: 237  NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
               CG + + ++TK G V++WG+  G RLGHG +     PK+I+AL+   +  +     H
Sbjct: 968  KACCGNQFSVILTKTGTVYTWGKGDGHRLGHGSEEHQRFPKMIEALRGKKIVDIQSSGCH 1027

Query: 297  TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK---KLNGPLEGIHVSSVSCGPWHTA 353
            T A+  SG+ + WG +  + G LG G E +L   K    L   +EG  +  ++CG   T 
Sbjct: 1028 TVAIAESGEFFCWGRN--DQGQLGLG-EAALKSNKGEPTLIECMEGKKLCGLACGVAQTF 1084

Query: 354  VVTSAG 359
              TS+ 
Sbjct: 1085 AWTSSA 1090


>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
          Length = 1019

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 163/344 (47%), Gaps = 39/344 (11%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           +ACG  H A++T   +++ +G    G+LG G  S VS P  + ALK   V+  ACG +HT
Sbjct: 85  LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHT 144

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVVT 356
             +T  G +Y  GG+N     LG   + + + P          H +  +S G   +A +T
Sbjct: 145 LVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPICF---FTSQHQLKQLSAGSNTSAALT 201

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G LF +GD + G +G  +  +V  P +V   K +  +  +CG +H+A V         
Sbjct: 202 VDGNLFMWGDNSEGQIGLKNVPNVCVPHQVTVGKPIAWI--SCGYYHSAFVT-------- 251

Query: 417 SSNCSSGKLFTWGDGDRGRLG------HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                 G+L+T+G+ + G+LG         K  +LVP     ++     QV+CG   TV 
Sbjct: 252 ----MEGELYTFGETECGKLGLPRQLLMNHKVPQLVPGIPEKVI-----QVACGGGHTVV 302

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSR 526
           LT    VYT G   +GQLG       +    E K+ +   ++    I+CG+ H A++T  
Sbjct: 303 LTEKA-VYTFGLGQFGQLG---LGTFIFETAEPKILEPIKDQKIIYISCGENHTALITDV 358

Query: 527 TEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
             +YT+G G +G+LG G  +  N   P+L        V+ + CG
Sbjct: 359 GLMYTFGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACG 402



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 156/339 (46%), Gaps = 35/339 (10%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT 301
           G    +V   G VF++G+    +    + S           KN     +ACG+ HT  +T
Sbjct: 47  GEPEEVVPDSGAVFTFGK---TKFAENIPSKF-------WFKNDIPTYLACGDEHTAIIT 96

Query: 302 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
            +  +Y +G +  N+G LG G+  ++  P  +   L+   V   +CG  HT V+T  G++
Sbjct: 97  GNNKLYMFGSN--NWGQLGLGSRSTVSKPTCVKA-LKPEKVKFAACGRNHTLVLTEEGKV 153

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +  G    G LG GD             +   T    C       + ++  GS++S+  +
Sbjct: 154 YAAGGNNEGQLGLGD------------TEDRNTFHPICFFTSQHQLKQLSAGSNTSAALT 201

Query: 422 -SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
             G LF WGD   G++G  +     VP  V   V      +SCG+  +  +T  G +YT 
Sbjct: 202 VDGNLFMWGDNSEGQIGLKNVPNVCVPHQVT--VGKPIAWISCGYYHSAFVTMEGELYTF 259

Query: 481 GSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
           G    G+LG P+    N K+P  V G   K  V ++ACG  H  VLT +  VYT+G G  
Sbjct: 260 GETECGKLGLPRQLLMNHKVPQLVPGIPEK--VIQVACGGGHTVVLTEKA-VYTFGLGQF 316

Query: 538 GRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G+LG G    +   P ++E +KD+++  I CG + TA I
Sbjct: 317 GQLGLGTFIFETAEPKILEPIKDQKIIYISCGENHTALI 355



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 155/313 (49%), Gaps = 35/313 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           P  V++     V+  ACG  H  ++T++G+V++ G    G+LG G   D +  HP     
Sbjct: 123 PTCVKALKPEKVKFAACGRNHTLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPICFFT 182

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            ++  ++ ++ G + + A+T+ G+++ WG +  + G +G  N  ++ +P ++     G  
Sbjct: 183 SQH-QLKQLSAGSNTSAALTVDGNLFMWGDN--SEGQIGLKNVPNVCVPHQVTV---GKP 236

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAAC 399
           ++ +SCG +H+A VT  G+L+TFG+   G LG   ++ ++   P+ V  +   + ++ AC
Sbjct: 237 IAWISCGYYHSAFVTMEGELYTFGETECGKLGLPRQLLMNHKVPQLVPGIPE-KVIQVAC 295

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP--- 456
           G  HT  + E  V             +T+G G  G+LG G     +  T    ++EP   
Sbjct: 296 GGGHTVVLTEKAV-------------YTFGLGQFGQLGLG---TFIFETAEPKILEPIKD 339

Query: 457 -NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEE 512
                +SCG + T  +T  G +YT G   +G+LG   +   N  +PT     L +  VE 
Sbjct: 340 QKIIYISCGENHTALITDVGLMYTFGDGRHGKLGLGMENFTNQFIPTLCSNFL-RFMVEL 398

Query: 513 IACGDYHVAVLTS 525
           +ACG  H+ V  +
Sbjct: 399 VACGGCHMIVFAT 411



 Score = 47.0 bits (110), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 7/92 (7%)

Query: 212 GSYAGVKMDSFV-----PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 266
           G +  + + +F+     PK +E      +  I+CG  H AL+T  G ++++G+   G+LG
Sbjct: 314 GQFGQLGLGTFIFETAEPKILEPIKDQKIIYISCGENHTALITDVGLMYTFGDGRHGKLG 373

Query: 267 HGVDSDVSH--PKLIDALKNINVELVACGEHH 296
            G+++  +   P L        VELVACG  H
Sbjct: 374 LGMENFTNQFIPTLCSNFLRFMVELVACGGCH 405


>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
          Length = 425

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 174/366 (47%), Gaps = 50/366 (13%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKLIDALKNINVELVACG 293
           ++ACGG H   +T+ G VF+ G    G+LG  + S V+H   P  +       VE V+ G
Sbjct: 77  SLACGGAHTLFLTESGRVFAAGLNDFGQLG--IGSSVTHSLEPIEVSGFDEKVVE-VSAG 133

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCGPWH 351
            HH+CAVT  G ++ WG ++   G LG G      +  P+K++  L    V  V+ G  H
Sbjct: 134 NHHSCAVTADGKLFAWGRNSS--GQLGLGKRAGKVVSTPRKVD-CLADSRVKMVALGSEH 190

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISV---------STPREVDSLKGLRTVRAACGVW 402
           +   T  G++ ++G    G LGHG + S+          TPR + +L G++  R A G+ 
Sbjct: 191 SIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGML 250

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
           H+A + E             G LF +G       G    E R  PT V  +  P   +V+
Sbjct: 251 HSACIDE------------KGTLFIFGQKTEKGFGRSGDELR--PTVVEEV--PFSEEVA 294

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVA 521
           CG   T  +T +G +Y+ GS   G LG    +  + P  ++  L K  V +++CG  H A
Sbjct: 295 CGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTA 354

Query: 522 VLTSRTEVYTWGKG------------ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V+ S  ++YTWG G            + G+LGHG+  D   P +VE  K+ +   + CG 
Sbjct: 355 VI-SGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGF 413

Query: 570 SFTAAI 575
           + T AI
Sbjct: 414 NHTGAI 419



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 119/232 (51%), Gaps = 20/232 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+V  WG   G G LG G   S     +    + P+ +++   + ++ IA G  H+A + 
Sbjct: 198 GEVLSWG-AAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACID 256

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           ++G +F +G++     G G   D   P +++ +     E VACG +HTC VT SGD+Y+W
Sbjct: 257 EKGTLFIFGQKT--EKGFGRSGDELRPTVVEEVPF--SEEVACGGYHTCVVTDSGDLYSW 312

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---- 365
           G SN N G LG G    +  P+ L   L    VS VSCG  HTAV+ S G ++T+G    
Sbjct: 313 G-SNEN-GCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI-SGGDIYTWGWGGA 369

Query: 366 DGTF--------GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           +GTF        G LGHG+ +    P  V+  K  R V  +CG  HT A+ E
Sbjct: 370 NGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFE 421



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 129/335 (38%), Gaps = 83/335 (24%)

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG-------IHVSSVSCGPWHTAVVTSAGQL 361
           WG  N ++G LG G   S W P      L G          +S++CG  HT  +T +G++
Sbjct: 37  WG--NGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRV 94

Query: 362 FTFGDGTFGVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           F  G   FG LG G  ++ S  P EV      + V  + G  H+ AV             
Sbjct: 95  FAAGLNDFGQLGIGSSVTHSLEPIEVSGFD-EKVVEVSAGNHHSCAVT------------ 141

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
           + GKLF WG    G+LG G +  ++V  P  V  L +     V+ G   ++A T  G V 
Sbjct: 142 ADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGEVL 201

Query: 479 TMGSPVYGQLGDPKANGKLPTRVEG-----KLTKNF------------------------ 509
           + G+   G+LG       L   +       +L KN                         
Sbjct: 202 SWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTL 261

Query: 510 ----------------------VEEI------ACGDYHVAVLTSRTEVYTWGKGANGRLG 541
                                 VEE+      ACG YH  V+T   ++Y+WG   NG LG
Sbjct: 262 FIFGQKTEKGFGRSGDELRPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLG 321

Query: 542 HGDTDDRNFPSLVE-ALKDKQVKSIVCGTSFTAAI 575
            G TD    P +++ +L    V  + CG   TA I
Sbjct: 322 LGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI 356


>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Strongylocentrotus purpuratus]
          Length = 536

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 158/319 (49%), Gaps = 24/319 (7%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D  V   V+ A V         G  A  VTK  EVF++G      LG G       P+ I
Sbjct: 18  DDLVVSGVKLACVF-----GSAGNEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKI 72

Query: 280 DALKNINVELVACGEH-HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           + L    +  +A G   H  A T +G++Y+WG +   +  LG+G      LP ++ G L 
Sbjct: 73  EGLCKKGMFALAFGSGPHVVAATENGEIYSWGHNG--YCQLGNGTTNQGLLPHRITGNLG 130

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRA 397
              +S ++CG  H+ V+T  G++F +G    G +G G   ++STPR+V S L G R V  
Sbjct: 131 SCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSI 190

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
           ACG   + AVV+            SG+++ WG    G+LG G+   +  P  V++L    
Sbjct: 191 ACGQTSSLAVVD------------SGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLI 238

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACG 516
             Q +CG++ ++AL+  G++YT G+  YGQLG   KAN     ++ G+    F++  A  
Sbjct: 239 ISQAACGYAHSMALSDEGNIYTWGANSYGQLGTGNKANLCGAAKI-GESIGRFIDIAATH 297

Query: 517 DYHV-AVLTSRTEVYTWGK 534
             H+ A +T   +VY WG+
Sbjct: 298 YAHISAAMTQTGKVYMWGQ 316



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 136/270 (50%), Gaps = 25/270 (9%)

Query: 219 MDSFVPKAVESAVVLDVQNIACG-GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           M S  P+ +E      +  +A G G H    T+ GE++SWG     +LG+G  +    P 
Sbjct: 64  MSSLTPRKIEGLCKKGMFALAFGSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPH 123

Query: 278 LIDA-LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
            I   L +  +  +ACG HH+  +T  G+++ WG +NC  G +G G   ++  P+K+   
Sbjct: 124 RITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNC--GQVGSGATANISTPRKVVSV 181

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 396
           L G  V S++CG   +  V  +G+++ +G    G LG G+ ++  +P +V SL GL   +
Sbjct: 182 LGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQ 241

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
           AACG  H+ A+ +             G ++TWG    G+LG G+K A L   C AA +  
Sbjct: 242 AACGYAHSMALSD------------EGNIYTWGANSYGQLGTGNK-ANL---CGAAKIGE 285

Query: 457 N---FCQVSCGHS--LTVALTTTGHVYTMG 481
           +   F  ++  H   ++ A+T TG VY  G
Sbjct: 286 SIGRFIDIAATHYAHISAAMTQTGKVYMWG 315



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 17/225 (7%)

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 412
           VT   ++F FG+     LG GD +S  TPR+++ L  KG+  +    G  H  A  E   
Sbjct: 41  VTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGP-HVVAATE--- 96

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA-LVEPNFCQVSCGHSLTVAL 471
                    +G++++WG     +LG+G     L+P  +   L      Q++CG   ++ L
Sbjct: 97  ---------NGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVL 147

Query: 472 TTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
           T  G V+  G    GQ+G    AN   P +V   L    V  IACG      +    EVY
Sbjct: 148 TDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVY 207

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            WG   NG+LG G+  ++  P  V +L    +    CG + + A+
Sbjct: 208 GWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMAL 252



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 18/250 (7%)

Query: 299 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE-GIHVSSVSCGPWHTAVVTS 357
           A+ ++ D   +   N +   LG G+ MS   P+K+ G  + G+   +   GP H    T 
Sbjct: 38  AIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGP-HVVAATE 96

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVD-SLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            G+++++G   +  LG+G       P  +  +L   +  + ACG  H+  + +       
Sbjct: 97  NGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTD------- 149

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVP-TCVAALVEPNFCQVSCGHSLTVALTTTG 475
                 G++F WG  + G++G G       P   V+ L       ++CG + ++A+  +G
Sbjct: 150 -----RGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSG 204

Query: 476 HVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            VY  G    GQLG     N   P +V   L    + + ACG  H   L+    +YTWG 
Sbjct: 205 EVYGWGYNGNGQLGLGNNVNQPSPCKVS-SLNGLIISQAACGYAHSMALSDEGNIYTWGA 263

Query: 535 GANGRLGHGD 544
            + G+LG G+
Sbjct: 264 NSYGQLGTGN 273



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 15/178 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV-LDVQNIACGGRHAALV 248
           G+VF WG     G +G     SG+ A +      P+ V S +    V +IACG   +  V
Sbjct: 151 GEVFAWGY-NNCGQVG-----SGATANIS----TPRKVVSVLGGKRVVSIACGQTSSLAV 200

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
              GEV+ WG    G+LG G + +   P  + +L  + +   ACG  H+ A++  G++YT
Sbjct: 201 VDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYT 260

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH-TAVVTSAGQLFTFG 365
           WG +  ++G LG GN+ +L    K+ G   G  +   +    H +A +T  G+++ +G
Sbjct: 261 WGAN--SYGQLGTGNKANLCGAAKI-GESIGRFIDIAATHYAHISAAMTQTGKVYMWG 315


>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
          Length = 1378

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 151/308 (49%), Gaps = 30/308 (9%)

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKK 332
           S P+ I A + + V+LV+CG+ H+ AV   G ++ WG GS    G +G   E S + P+K
Sbjct: 86  SKPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLG-IGEFKERS-FTPQK 143

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKG 391
           +   L GI +  VSCG +H+  ++  GQ+F++G  + G LG G  + S ++P+ V SL+G
Sbjct: 144 IKA-LAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEG 202

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA---RLVPT 448
           +   + A G  H+ A+              SG  F WG    G+L     +A   R  P 
Sbjct: 203 IPLAQVAAGGAHSFAL------------SLSGTSFGWGSNSAGQLALSGTKAPVQRYKPL 250

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN 508
            V AL       +SCG   T  LT  G VYT G+   GQLG   A  + P  VE      
Sbjct: 251 SVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLGH-SAEQRGPQCVER--IDG 307

Query: 509 FVEEIACGDYH-VAVLTSRTEVYTWGKG----ANGRLGHGDTDDRNFPSLVEA--LKDKQ 561
            V +I CG YH +A + +  +V ++G G    +N       TD+ +   L+ A  L D Q
Sbjct: 308 LVSQIDCGSYHTLAYVYTTGQVVSFGHGPSCTSNSTHSETVTDNADISCLISADDLVDIQ 367

Query: 562 VKSIVCGT 569
           VK I  GT
Sbjct: 368 VKHIFAGT 375



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 103/188 (54%), Gaps = 15/188 (7%)

Query: 252  GEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            GE+F+WG+   G+LG G +      P++++ L  + +  ++ GE H+ A++++G++Y+WG
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972

Query: 311  GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
             ++  FG LG G+  S   P  L   L+   V  ++CG  HTA++T  G +FTFG G +G
Sbjct: 973  KND--FGQLGLGHTESKDSPSLLRA-LDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYG 1029

Query: 371  VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
             LGH        P  V  L G R  + ACG WHT A V  +           GK+F +G 
Sbjct: 1030 QLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSEL-----------GKVFAFGS 1078

Query: 431  GDRGRLGH 438
            G  G+LG+
Sbjct: 1079 GKNGQLGN 1086



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 135/264 (51%), Gaps = 24/264 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDAL 282
           P+ +++   L V  ++CG  H+  V  +G VF+WG    G+LG G   + S  P+ I AL
Sbjct: 88  PEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKAL 147

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
             I +  V+CG +H+ A++  G +++WG +  + G LG G E+ S   P+++   LEGI 
Sbjct: 148 AGIKIIQVSCGYYHSLALSEDGQVFSWGKN--SHGQLGLGKEVPSQTSPQRVRS-LEGIP 204

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL---GHGDRISVSTPREVDSLKGLRTVRAA 398
           ++ V+ G  H+  ++ +G  F +G  + G L   G    +    P  V +LK L  V  +
Sbjct: 205 LAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYIS 264

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HTA + +            +G ++T+G    G+LGH  ++    P CV   ++   
Sbjct: 265 CGSEHTAVLTQ------------NGAVYTFGANSSGQLGHSAEQRG--PQCVER-IDGLV 309

Query: 459 CQVSCGHSLTVA-LTTTGHVYTMG 481
            Q+ CG   T+A + TTG V + G
Sbjct: 310 SQIDCGSYHTLAYVYTTGQVVSFG 333



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 127/251 (50%), Gaps = 23/251 (9%)

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVDS 388
           P+++    E + V  VSCG  H+  V   G++F +G G+ G LG G+    S TP+++ +
Sbjct: 88  PEQIQA-FETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKA 146

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVP 447
           L G++ ++ +CG +H+ A+ E             G++F+WG    G+LG G +  ++  P
Sbjct: 147 LAGIKIIQVSCGYYHSLALSE------------DGQVFSWGKNSHGQLGLGKEVPSQTSP 194

Query: 448 TCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL----PTRVEG 503
             V +L      QV+ G + + AL+ +G  +  GS   GQL        +    P  V G
Sbjct: 195 QRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSV-G 253

Query: 504 KLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
            L    V  I+CG  H AVLT    VYT+G  ++G+LGH  + ++  P  VE + D  V 
Sbjct: 254 ALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLGH--SAEQRGPQCVERI-DGLVS 310

Query: 564 SIVCGTSFTAA 574
            I CG+  T A
Sbjct: 311 QIDCGSYHTLA 321



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 125/248 (50%), Gaps = 22/248 (8%)

Query: 164 DTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV 223
           +T RV L S     S    H      G VF WG    +G LG G          K  SF 
Sbjct: 95  ETLRVDLVSCGKEHSLAVCHK-----GRVFAWG-AGSEGQLGIG--------EFKERSFT 140

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDA 281
           P+ +++   + +  ++CG  H+  +++ G+VFSWG+   G+LG G  V S  S P+ + +
Sbjct: 141 PQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTS-PQRVRS 199

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGI 340
           L+ I +  VA G  H+ A++LSG  + WG ++     L G    +  + P  + G L+ +
Sbjct: 200 LEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSV-GALKTL 258

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            V  +SCG  HTAV+T  G ++TFG  + G LGH        P+ V+ + GL + +  CG
Sbjct: 259 GVVYISCGSEHTAVLTQNGAVYTFGANSSGQLGHS--AEQRGPQCVERIDGLVS-QIDCG 315

Query: 401 VWHTAAVV 408
            +HT A V
Sbjct: 316 SYHTLAYV 323



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 25/219 (11%)

Query: 359  GQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            G+LF +G  + G LG G RI  S  TP+ V+ L G+  V+ + G  H+ A+         
Sbjct: 913  GELFAWGQNSHGQLGLG-RIFPSSPTPQIVEHLAGVPLVQISAGEAHSMAL--------- 962

Query: 417  SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 +G +++WG  D G+LG G  E++  P+ + AL       ++CG S T  LT  G 
Sbjct: 963  ---SMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGL 1019

Query: 477  VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKG 535
            V+T G+  YGQLG      +L   +  +L  N V +IACG +H +A ++   +V+ +G G
Sbjct: 1020 VFTFGAGKYGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSG 1079

Query: 536  ANGRLGHGDTDD---------RNFPSLVEALKDKQVKSI 565
             NG+LG+  T +         R  P+L EA   + +  +
Sbjct: 1080 KNGQLGNCGTHNQPNSYVNLRRRIPTLNEATVKRWIADV 1118



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 93/186 (50%), Gaps = 13/186 (6%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G++F WG+    G LG G         +   S  P+ VE    + +  I+ G  H+  ++
Sbjct: 913  GELFAWGQ-NSHGQLGLG--------RIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALS 963

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G V+SWG+   G+LG G       P L+ AL +  V+ +ACG  HT  +T  G ++T+
Sbjct: 964  MTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTF 1023

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
            G     +G LGH +      P  L   L G  V+ ++CG WHT A V+  G++F FG G 
Sbjct: 1024 GAG--KYGQLGHSSTRDELRP-CLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGK 1080

Query: 369  FGVLGH 374
             G LG+
Sbjct: 1081 NGQLGN 1086



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 77/157 (49%), Gaps = 9/157 (5%)

Query: 423  GKLFTWGDGDRGRLGHGDKEARLVPT-----CVAALVEPNFCQVSCGHSLTVALTTTGHV 477
            G+LF WG    G+LG G    R+ P+      V  L      Q+S G + ++AL+ TG+V
Sbjct: 913  GELFAWGQNSHGQLGLG----RIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNV 968

Query: 478  YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
            Y+ G   +GQLG      K    +   L    V+ +ACG  H A+LT    V+T+G G  
Sbjct: 969  YSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKY 1028

Query: 538  GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G+LGH  T D   P LV  L   +V  I CG   T A
Sbjct: 1029 GQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLA 1065



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 1/102 (0%)

Query: 475  GHVYTMGSPVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
            G ++  G   +GQLG  +     PT ++   L    + +I+ G+ H   L+    VY+WG
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972

Query: 534  KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            K   G+LG G T+ ++ PSL+ AL  ++V  + CG S TA +
Sbjct: 973  KNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALL 1014


>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
 gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
 gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
          Length = 480

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 168/340 (49%), Gaps = 29/340 (8%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +++CG  H+A+VT   +++ +G    G+LG G  S +S P  + ALK   V+L ACG +H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
           T   T  G++Y  GG+  N G LG G+         ++       +  +S G   +A +T
Sbjct: 99  TLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-------- 206

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
               + G+L+ +G+ + G+LG  ++       P  V+ + E    QV+CG   TV LT  
Sbjct: 207 ----TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTEN 261

Query: 475 GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVLTSRTEVY 530
             VYT G   +GQLG       L    E K+ +N     +  I+CG+ H A++T    +Y
Sbjct: 262 A-VYTFGLGQFGQLG---LGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMY 317

Query: 531 TWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           T+G G +G+LG G  +  N   P+L        VK + CG
Sbjct: 318 TFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 150/309 (48%), Gaps = 27/309 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G V++ G    G+LG G   + +   +I    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G ++ WG +  + G +G  N  ++ +P+++     G  V
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDN--SEGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+ FG+   G LG  +++  +  TP+ V  +   + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  +  + +    
Sbjct: 252 GEHTVVLTENAV-------------YTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            +SCG + T  +T  G +YT G   +G+LG   +   N  +PT     L +  V+ +ACG
Sbjct: 299 YISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL-RFIVKLVACG 357

Query: 517 DYHVAVLTS 525
             H+ V  +
Sbjct: 358 GCHMVVFAA 366



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 18/188 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F+WG+             S    G+K  S V    +  +   V  I+CG  H+A VT
Sbjct: 159 GRLFMWGD------------NSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVT 206

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
             GE++ +GE   G+LG       +H  P+L+  +    ++ VACG  HT  +T    +Y
Sbjct: 207 TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGEHTVVLT-ENAVY 264

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           T+G     FG LG G  +      K+   +    +S +SCG  HTA++T  G ++TFGDG
Sbjct: 265 TFGLG--QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDG 322

Query: 368 TFGVLGHG 375
             G LG G
Sbjct: 323 RHGKLGLG 330



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           ++CGD H AV+T   ++Y +G    G+LG G     + P+ V+ALK ++VK   CG + T
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99


>gi|118383694|ref|XP_001025001.1| regulator of chromosome condensation protein [Tetrahymena
           thermophila]
 gi|89306768|gb|EAS04756.1| regulator of chromosome condensation protein [Tetrahymena
           thermophila SB210]
          Length = 1447

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 176/378 (46%), Gaps = 51/378 (13%)

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           G LG G H+   Y G   +  VPK     +V  ++ I+CG  H A VT           L
Sbjct: 48  GQLGLG-HK---YTG--KNYLVPKICSYNLV--IKQISCGEEHTAFVT--------SSNL 91

Query: 262 GGRLGHGVD----SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG 317
            GRLG  +D    +  S P L++ L+ +    +ACG +HT AV  +G+ Y+WG  N + G
Sbjct: 92  KGRLG--IDNKQITQSSSPCLVEDLQKLVCCKIACGSNHTVAVMENGEAYSWG--NGDLG 147

Query: 318 LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 377
           +LG G++   W P K+ G  +      VSCG  HT ++   G++F  G    G L   + 
Sbjct: 148 VLGIGSQEHTWAPVKVLGQKQK--YIDVSCGARHTMLLNQYGEVFACGSNEEGQLCLPNS 205

Query: 378 ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG 437
                P +V   +  + + A CG + T  + ++            G++++ G  + G+LG
Sbjct: 206 SGELYPSKV---RIEKAIEAVCGHYFTLILTQL------------GEIYSCGANNFGQLG 250

Query: 438 HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL 497
            G K +      V  L +    +V+ GH  + AL   G ++  G+ V+G           
Sbjct: 251 IGHKTSTKELQKVQNLEDQTIIKVAAGHH-SAALNRRGELFIWGTGVFGDYP-------F 302

Query: 498 PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
           PT+   K+   F  +I+ G +  + + +   V+TWG   NG LG GD + R  P  V AL
Sbjct: 303 PTKF-CKIDSPF-NDISVGGFSGSSVDANGVVWTWGSNQNGELGVGDQEPRLNPFPVAAL 360

Query: 558 KDKQVKSIVCGTSFTAAI 575
           K ++V  + CG ++  A+
Sbjct: 361 KGRKVIKVACGINYMVAL 378


>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
 gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 155/316 (49%), Gaps = 22/316 (6%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLIDALKNINVELVAC 292
           +V  ++    HAA V + GEVF+ G+      GH   +  +  P+L++ALK ++ + V+ 
Sbjct: 164 NVVQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSV 223

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWH 351
           G + T  +T  G +YT G SN + G LGHG+ +    PK +   LEGI  V  ++ GP +
Sbjct: 224 GLNFTVFLTRQGQLYTCG-SNTH-GQLGHGDTLDRPTPKIIE-LLEGIGPVVQIAAGPSY 280

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL--KGLRTVRAACGVWHTAAVVE 409
              VT  G +++FG G+   LGHG++     PR + +   K +  V  + G  H  A+  
Sbjct: 281 VLAVTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALD- 339

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
                      SSG +++WG G  G LGHGD+  + +P+ V  L      Q       T 
Sbjct: 340 -----------SSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAVQACARKRKTF 388

Query: 470 ALTTTGHVYTMGSPVYGQLGDPKAN---GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            L   G VY  G   +G LG P  +     +  RV   L  + V +I+ G YH  V+T++
Sbjct: 389 VLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLRAHRVSQISTGLYHTVVVTNQ 448

Query: 527 TEVYTWGKGANGRLGH 542
            +++ +G     +LGH
Sbjct: 449 GQMFGFGDNERVQLGH 464



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 29/300 (9%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P+ VE+   +  + ++ G      +T+QG++++ G    G+LGHG   D   PK+I+ 
Sbjct: 205 FRPRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRPTPKIIEL 264

Query: 282 LKNIN-VELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNG-PLE 338
           L+ I  V  +A G  +  AVT +G +Y++G GSN     LGHG +   + P+ +     +
Sbjct: 265 LEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNF---CLGHGEQHDEFQPRAIQTFRRK 321

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
            IHV  VS G  H   + S+G ++++G G  G LGHGD I  + P  V+ LK    V+A 
Sbjct: 322 DIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAVQAC 381

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK---EARLVPTCVAALVE 455
                T  +V+             G ++ +G    G LG  D+   E  + P  + +L  
Sbjct: 382 ARKRKTFVLVD------------DGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLRA 429

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA 514
               Q+S G   TV +T  G ++  G     QLG     G L PT +       FV+E A
Sbjct: 430 HRVSQISTGLYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQPTEI-------FVQETA 482



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 132/277 (47%), Gaps = 23/277 (8%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP-KKLNGPLEGIHVSSVSCG 348
           V  G +HT  +  S  +Y+ G S C  G+LGHG E +  +   ++  P    +V  VS  
Sbjct: 116 VTTGRYHTLLIRDS-SVYSCGSSLC--GVLGHGAETTQCVAFTRIRFP-SLANVVQVSAS 171

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
             H A V  +G++FT GD +    GH D    +  PR V++LK +   + + G+  T  +
Sbjct: 172 HNHAAFVLQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFL 231

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSCGH 465
                          G+L+T G    G+LGHGD   R  P  +  L  + P   Q++ G 
Sbjct: 232 TR------------QGQLYTCGSNTHGQLGHGDTLDRPTPKIIELLEGIGP-VVQIAAGP 278

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNF-VEEIACGDYHVAVL 523
           S  +A+T  G VY+ G      LG  + + +  P  ++    K+  V  ++ GD H   L
Sbjct: 279 SYVLAVTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVAL 338

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDK 560
            S   VY+WGKG  G LGHGD  D+  PSLV  LK +
Sbjct: 339 DSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSR 375



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 114/239 (47%), Gaps = 21/239 (8%)

Query: 216 GVKMDSFVPKAVESAV-VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
           G  +D   PK +E    +  V  IA G  +   VT  G V+S+G      LGHG   D  
Sbjct: 251 GDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNFCLGHGEQHDEF 310

Query: 275 HPKLIDAL--KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
            P+ I     K+I+V  V+ G+ H  A+  SG +Y+WG   C  G LGHG+E+   LP  
Sbjct: 311 QPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYC--GALGHGDEIDKTLPSL 368

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI---SVSTPREVDSL 389
           +N     + V + +     T V+   G ++ FG   FG LG  DR     V TPR +DSL
Sbjct: 369 VNCLKSRLAVQACA-RKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSL 427

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
           +  R  + + G++HT  V             + G++F +GD +R +LGH      L PT
Sbjct: 428 RAHRVSQISTGLYHTVVVT------------NQGQMFGFGDNERVQLGHDTLRGCLQPT 474



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 103/226 (45%), Gaps = 20/226 (8%)

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS---VSTPREVDSLKGLRTVRAACGV 401
           V+ G +HT ++  +  +++ G    GVLGHG   +     T     SL  +  V A+   
Sbjct: 116 VTTGRYHTLLIRDS-SVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLANVVQVSASHN- 173

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQ 460
            H A V++            SG++FT GD      GH D    +  P  V AL   +  Q
Sbjct: 174 -HAAFVLQ------------SGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQ 220

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYH 519
           VS G + TV LT  G +YT GS  +GQLG      +  P  +E       V +IA G  +
Sbjct: 221 VSVGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSY 280

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
           V  +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 281 VLAVTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVV 326


>gi|403361228|gb|EJY80312.1| hypothetical protein OXYTRI_22298 [Oxytricha trifallax]
          Length = 855

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 124/254 (48%), Gaps = 24/254 (9%)

Query: 225 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN 284
           K + +  + + + ++ G  H  L+ K+  VFS G    GRLGHG + D + P +I  L+ 
Sbjct: 218 KKINTEYITEFEAVSWGIDHFLLLDKKKRVFSTGFAKYGRLGHGDERDRTKPFMIKELEG 277

Query: 285 INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMS-----LWLPKKLNGPLE 338
             +  + CG HH+ AV+  GD+Y+WG  N   G LG G N+ S       LPKK+    +
Sbjct: 278 KKIVYIQCGMHHSMAVSQDGDVYSWGLGNG--GRLGQGYNDESRSNPNQLLPKKIEFTFD 335

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
              + +VSCG   + V   AG L+T+G G        D I  S+P  +  ++  + V  +
Sbjct: 336 DNQIMNVSCGSTISCVAVKAGTLYTWGKGEHEKPKFDDFIEYSSPFPM--IEDKQIVYVS 393

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  H  A+              +G+LF WG G+ G LGHGD + RL   C  +  E   
Sbjct: 394 CGASHVMAL------------DRNGRLFGWGQGNEGCLGHGDCKKRL-SVCPISFFENKR 440

Query: 459 C-QVSCGHSLTVAL 471
           C  V+CG   TV +
Sbjct: 441 CIDVACGDKFTVVI 454



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 149/355 (41%), Gaps = 57/355 (16%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ I+  G ++A  +K G ++ WG    G+LG           + D L+ +NVE     +
Sbjct: 145 IKKISASGFNSAAFSKTGRLWVWGGTQRGKLGLS-------QMIRDQLEPLNVEFEVQNK 197

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHTA 353
                +    +++     N                 KK+N   E I    +VS G  H  
Sbjct: 198 EKENGIETQLEVFLDENKN----------------HKKIN--TEYITEFEAVSWGIDHFL 239

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++    ++F+ G   +G LGHGD    + P  +  L+G + V   CG+ H+ AV      
Sbjct: 240 LLDKKKRVFSTGFAKYGRLGHGDERDRTKPFMIKELEGKKIVYIQCGMHHSMAV------ 293

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHG-DKEAR-----LVPTCVAALVEPN-FCQVSCGHS 466
                    G +++WG G+ GRLG G + E+R     L+P  +    + N    VSCG +
Sbjct: 294 ------SQDGDVYSWGLGNGGRLGQGYNDESRSNPNQLLPKKIEFTFDDNQIMNVSCGST 347

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT-----RVEGKLTKNFVEEIACGDYHVA 521
           ++      G +YT G    G+   PK +  +        +E K     +  ++CG  HV 
Sbjct: 348 ISCVAVKAGTLYTWGK---GEHEKPKFDDFIEYSSPFPMIEDKQ----IVYVSCGASHVM 400

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
            L     ++ WG+G  G LGHGD   R     +   ++K+   + CG  FT  I 
Sbjct: 401 ALDRNGRLFGWGQGNEGCLGHGDCKKRLSVCPISFFENKRCIDVACGDKFTVVIA 455



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 27/228 (11%)

Query: 202 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 261
           G LG G  R       +   F+ K +E   ++ +Q   CG  H+  V++ G+V+SWG   
Sbjct: 256 GRLGHGDERD------RTKPFMIKELEGKKIVYIQ---CGMHHSMAVSQDGDVYSWGLGN 306

Query: 262 GGRLGHGV-DSDVSHP------KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 314
           GGRLG G  D   S+P      K+     +  +  V+CG   +C    +G +YTWG    
Sbjct: 307 GGRLGQGYNDESRSNPNQLLPKKIEFTFDDNQIMNVSCGSTISCVAVKAGTLYTWGKGEH 366

Query: 315 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 374
                    E S   P      +E   +  VSCG  H   +   G+LF +G G  G LGH
Sbjct: 367 EKPKFDDFIEYSSPFPM-----IEDKQIVYVSCGASHVMALDRNGRLFGWGQGNEGCLGH 421

Query: 375 GD---RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
           GD   R+SV     +   +  R +  ACG   T  + EV     ++ N
Sbjct: 422 GDCKKRLSVCP---ISFFENKRCIDVACGDKFTVVIAEVYPDKKNTMN 466



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 114/283 (40%), Gaps = 51/283 (18%)

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVW 402
            V  G  HT ++   G++F+FG+G  G +G G + I +  P ++    G +  +    + 
Sbjct: 90  QVEAGLSHTLLLNRRGEVFSFGEGLQGQVGIGQKTIHLQKPTQLYLESGAKECQKIKKIS 149

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG------------------HGDKEAR 444
            +        G +S++   +G+L+ WG   RG+LG                     ++  
Sbjct: 150 AS--------GFNSAAFSKTGRLWVWGGTQRGKLGLSQMIRDQLEPLNVEFEVQNKEKEN 201

Query: 445 LVPTCVAALVEPN-------------FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
            + T +   ++ N             F  VS G    + L     V++ G   YG+LG  
Sbjct: 202 GIETQLEVFLDENKNHKKINTEYITEFEAVSWGIDHFLLLDKKKRVFSTGFAKYGRLGHG 261

Query: 492 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN-- 549
               +    +  +L    +  I CG +H   ++   +VY+WG G  GRLG G  D+    
Sbjct: 262 DERDRTKPFMIKELEGKKIVYIQCGMHHSMAVSQDGDVYSWGLGNGGRLGQGYNDESRSN 321

Query: 550 ----FPSLVE-ALKDKQVKSIVCGTSFT----AAICLHKWVSG 583
                P  +E    D Q+ ++ CG++ +     A  L+ W  G
Sbjct: 322 PNQLLPKKIEFTFDDNQIMNVSCGSTISCVAVKAGTLYTWGKG 364


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 149/325 (45%), Gaps = 22/325 (6%)

Query: 229 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 288
           SA VL    ++ GG H+ ++T    V++WG+   G+LG G  +    P     L   +V 
Sbjct: 66  SAAVLGEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLP--SVA 123

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            V+ GE H+ A+T  G ++ WG ++   G LG G       P ++ G      +  V+ G
Sbjct: 124 QVSAGESHSLALTDDGRVFAWGLNSS--GQLGDGTTADSRTPVQVQGLATDSTIKVVAAG 181

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             H+  +TS G++F +G  + G LG+   +  S P +V  L    T  AA G  H+ A+ 
Sbjct: 182 GNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPANVTAVAAGGN-HSLAL- 239

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL-VEPNFCQVSCGHSL 467
                       S G+++ WG    G+LG G       P  VA L        VS G   
Sbjct: 240 -----------TSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDH 288

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           ++AL   G VY  G   YGQLG+      ++P +V G      V  ++ G      LTS 
Sbjct: 289 SLALMQDGTVYAWGGNSYGQLGNGTTTASEMPVQVTGLAN---VTAVSAGGSDSLALTSD 345

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFP 551
             VY WG  ++G+LG G T +RN P
Sbjct: 346 GYVYAWGLNSSGQLGDGTTSNRNTP 370



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 121/281 (43%), Gaps = 37/281 (13%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYA-GVKMDSFVPKAVES-AVVLDVQNIACGGRHAAL 247
           G VF WG           ++ SG    G   DS  P  V+  A    ++ +A GG H+  
Sbjct: 139 GRVFAWG-----------LNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLA 187

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           +T  G VF+WG+   G+LG+    D S P  +  L   NV  VA G +H+ A+T  G +Y
Sbjct: 188 LTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLP-ANVTAVAAGGNHSLALTSDGRIY 246

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG ++   G LG G   +   P  + G   G    +VS G  H+  +   G ++ +G  
Sbjct: 247 AWGLNSS--GQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGN 304

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
           ++G LG+G   +   P +V  L  +  V A               GS S +  S G ++ 
Sbjct: 305 SYGQLGNGTTTASEMPVQVTGLANVTAVSAG--------------GSDSLALTSDGYVYA 350

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
           WG    G+LG G    R  P  V       F  +S G  LT
Sbjct: 351 WGLNSSGQLGDGTTSNRNTPVRV-------FSVLSTGALLT 384



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 129/295 (43%), Gaps = 24/295 (8%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCG 348
           V+ G  H+  +T    ++ WG  N N G LG G       P     P +G+  V+ VS G
Sbjct: 75  VSAGGSHSLVLTSDQTVWAWG-DNTN-GQLGDGTTTGRQTPT----PAQGLPSVAQVSAG 128

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAV 407
             H+  +T  G++F +G  + G LG G      TP +V  L    T++  A G  H+ A+
Sbjct: 129 ESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLAL 188

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
                        S G++F WG    G+LG+       +P  V  L   N   V+ G + 
Sbjct: 189 ------------TSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGL-PANVTAVAAGGNH 235

Query: 468 TVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           ++ALT+ G +Y  G    GQLGD   +N   P  V G    +    ++ G  H   L   
Sbjct: 236 SLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQD 295

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWV 581
             VY WG  + G+LG+G T     P  V  L +  V ++  G S + A+    +V
Sbjct: 296 GTVYAWGGNSYGQLGNGTTTASEMPVQVTGLAN--VTAVSAGGSDSLALTSDGYV 348



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 18/217 (8%)

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
           ++VS G  H+ V+TS   ++ +GD T G LG G      TP     L  +  V A  G  
Sbjct: 73  AAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPSVAQVSA--GES 130

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV- 461
           H+ A+ +             G++F WG    G+LG G       P  V  L   +  +V 
Sbjct: 131 HSLALTD------------DGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVV 178

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHV 520
           + G + ++ALT+ G V+  G    GQLG+    +  +P +V+G L  N V  +A G  H 
Sbjct: 179 AAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQG-LPAN-VTAVAAGGNHS 236

Query: 521 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
             LTS   +Y WG  ++G+LG G T + + P LV  L
Sbjct: 237 LALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGL 273


>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
          Length = 850

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 121/249 (48%), Gaps = 24/249 (9%)

Query: 244 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
           H   VT QGEV+SWG     +LG   D   + P  I AL+   V  V  G HH+ AV+ +
Sbjct: 96  HVLAVTLQGEVYSWGSNSYKQLGR--DGVNNRPMKITALEGEEVVQVCAGGHHSAAVSKA 153

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG--PWHTAVVTSAGQL 361
           G++YTWG     +G LGHG    + +P ++    EGI V  V+CG    H+  VT  G +
Sbjct: 154 GNLYTWG--RGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDGHI 211

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           ++FGDG FG LGHG       P  +D                   +V+V+ GSS+S+  S
Sbjct: 212 YSFGDGDFGKLGHGTNDRRRQPERID-----------------FDIVKVVCGSSTSAAIS 254

Query: 422 -SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
            SG L+ WG G R RLG G +     P    AL        +      VA+T  G V+  
Sbjct: 255 LSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNTHKVVDCALSSEHGVAVTDRGEVFVW 314

Query: 481 GSPVYGQLG 489
           G+  +GQLG
Sbjct: 315 GANDHGQLG 323



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 152/319 (47%), Gaps = 37/319 (11%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWG------EELGGRLGHGVDSDVSHPKLIDALKNIN 286
           L+  +IA G R   ++  +G ++S G       ++   LGH  +S ++  + +++ + I 
Sbjct: 32  LNPTHIALGQRGTFVIDGEGRLWSCGSHTRPQNDVKSFLGHA-ESSLALVEGLESERFIQ 90

Query: 287 VELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
           V   +    H  AVTL G++Y+WG  S    G  G  N      P K+   LEG  V  V
Sbjct: 91  VSATS----HVLAVTLQGEVYSWGSNSYKQLGRDGVNNR-----PMKITA-LEGEEVVQV 140

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL-KGLRTVRAACGV--W 402
             G  H+A V+ AG L+T+G G +G LGHG    V+ P  V +  +G+R V  ACG+   
Sbjct: 141 CAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDA 200

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
           H+  V E             G ++++GDGD G+LGHG  + R  P      ++ +  +V 
Sbjct: 201 HSMCVTE------------DGHIYSFGDGDFGKLGHGTNDRRRQPE----RIDFDIVKVV 244

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
           CG S + A++ +G +Y  G     +LG          R    L  + V + A    H   
Sbjct: 245 CGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNTHKVVDCALSSEHGVA 304

Query: 523 LTSRTEVYTWGKGANGRLG 541
           +T R EV+ WG   +G+LG
Sbjct: 305 VTDRGEVFVWGANDHGQLG 323



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 140/321 (43%), Gaps = 39/321 (12%)

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +++WG  N     LG+     +  P+ +N  L  ++ + ++ G   T V+   G+L++ G
Sbjct: 1   VFSWG--NTRDAELGYVANQPVESPQ-INTLLSRLNPTHIALGQRGTFVIDGEGRLWSCG 57

Query: 366 DGTF------GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
             T         LGH +    S+   V+ L+  R ++ +     T+ V+ V +       
Sbjct: 58  SHTRPQNDVKSFLGHAE----SSLALVEGLESERFIQVSA----TSHVLAVTL------- 102

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
              G++++WG     +LG      R  P  + AL      QV  G   + A++  G++YT
Sbjct: 103 --QGEVYSWGSNSYKQLGRDGVNNR--PMKITALEGEEVVQVCAGGHHSAAVSKAGNLYT 158

Query: 480 MGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 536
            G   YG+LG   ++   +PTRV        V  +ACG  D H   +T    +Y++G G 
Sbjct: 159 WGRGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGD 218

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSGVDQSMCSGC 592
            G+LGHG  D R  P  +    D  +  +VCG+S +AAI     L+ W  G    + +G 
Sbjct: 219 FGKLGHGTNDRRRQPERI----DFDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGT 274

Query: 593 RIPFNFKRKRHNCYNCGLVYC 613
                  R  H      +V C
Sbjct: 275 EAVIWQPRTAHALNTHKVVDC 295



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 4/122 (3%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
            D+  + CG   +A ++  G ++ WG     RLG G ++ +  P+   AL    V   A 
Sbjct: 238 FDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNTHKVVDCAL 297

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
              H  AVT  G+++ WG +  + G LG   G+E ++  P+ +  P E   V+ V C P+
Sbjct: 298 SSEHGVAVTDRGEVFVWGAN--DHGQLGADAGSEKTIIAPRVIKLPGEFPAVNRVHCFPY 355

Query: 351 HT 352
            T
Sbjct: 356 GT 357


>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
          Length = 1199

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 165/344 (47%), Gaps = 39/344 (11%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  S V+ P  + ALK   V+  ACG +HT
Sbjct: 30  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 89

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNE--------MSLWLPKKLNGPLEGIHVSSVSCGP 349
              T  G +Y  GG+N   G LG G+         +S +  ++         +  +S G 
Sbjct: 90  LVSTEGGKVYASGGNNE--GQLGLGDTDERNSFHLISFFTSQR--------KIKQLSAGS 139

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             +A +T  G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V  
Sbjct: 140 NTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWI--SCGYYHSAFVT- 196

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSL 467
                      + G+L+T+G+ + G+LG   +      +P  V  + E    QV+CG   
Sbjct: 197 -----------TEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPE-KVVQVACGGGH 244

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKLPT-RVEGKLTKNFVEEIACGDYHVAVLTSR 526
           TV LT    VYT G   +GQLG      + P  +V   +    +  I CG+ H A++T  
Sbjct: 245 TVVLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDL 303

Query: 527 TEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
             +YT+G G +G+LG G  +  N   P+L        V+ + CG
Sbjct: 304 GLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACG 347



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 144/298 (48%), Gaps = 23/298 (7%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            KN     ++CG+ HT  VT +  +Y +G +  N+G LG G++ ++  P  +   L+   
Sbjct: 22  FKNDIPAFLSCGDEHTAIVTGNNKLYMFGSN--NWGQLGLGSKSTVNKPTCVKA-LKPEK 78

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V   +CG  HT V T  G+++  G    G LG GD    ++   +      R ++     
Sbjct: 79  VKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAG 138

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            +T+A +              G+LF WGD   G++G  +     VP  V   V      +
Sbjct: 139 SNTSAAL-----------TEDGELFMWGDNSEGQIGLKNITNVCVPQQVT--VGKPISWI 185

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDY 518
           SCG+  +  +TT G +YT G P  G+LG PK    N ++P  V G   K  V ++ACG  
Sbjct: 186 SCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEK--VVQVACGGG 243

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H  VLT +  VYT+G G  G+LG G    +   P ++E +KD ++ SI CG + TA I
Sbjct: 244 HTVVLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALI 300



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 149/310 (48%), Gaps = 29/310 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G+V++ G    G+LG G   + +   LI    
Sbjct: 68  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFT 127

Query: 284 NI-NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +   ++ ++ G + + A+T  G+++ WG ++   G +G  N  ++ +P+++     G  +
Sbjct: 128 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSE--GQIGLKNITNVCVPQQVT---VGKPI 182

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL--RTVRAACG 400
           S +SCG +H+A VT+ G+L+TFG+   G LG   ++ V+  R   S+ G+  + V+ ACG
Sbjct: 183 SWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNH-RMPQSVPGIPEKVVQVACG 241

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G       VP  +  + +    
Sbjct: 242 GGHTVVLTEKAV-------------YTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKIS 288

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIAC 515
            + CG + T  +T  G +YT G   +G+LG    N     +    L  NF    V+ +AC
Sbjct: 289 SIFCGENHTALITDLGLMYTFGDGRHGKLGLGLEN--FTNQFTPTLCSNFLRFIVQLVAC 346

Query: 516 GDYHVAVLTS 525
           G  H  V  +
Sbjct: 347 GGCHTLVFAT 356



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 122/264 (46%), Gaps = 26/264 (9%)

Query: 146 LSSGGSDGRTG-HLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGIL 204
           L  G +D R   HL        ++   SA S++S     D     G++F+WG+       
Sbjct: 109 LGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTED-----GELFMWGD------- 156

Query: 205 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 264
                 S    G+K  + V    +  V   +  I+CG  H+A VT +GE++++GE   G+
Sbjct: 157 -----NSEGQIGLKNITNVCVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGK 211

Query: 265 LGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 322
           LG      V+H  P+ +  +    V+ VACG  HT  +T    +YT+G     FG LG G
Sbjct: 212 LGLPKQLLVNHRMPQSVPGIPEKVVQ-VACGGGHTVVLTEKA-VYTFGLG--QFGQLGLG 267

Query: 323 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG--DRISV 380
             +      K+   ++ + +SS+ CG  HTA++T  G ++TFGDG  G LG G  +  + 
Sbjct: 268 TFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQ 327

Query: 381 STPREVDSLKGLRTVRAACGVWHT 404
            TP    +         ACG  HT
Sbjct: 328 FTPTLCSNFLRFIVQLVACGGCHT 351


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 120/214 (56%), Gaps = 15/214 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACG 293
           +  I CG  H+  ++K GE+F+WG+ L G+LG G   + ++ P++++ L  I +  ++ G
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAG 317

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           + H+ A+++SG++Y+WG ++  FG LG G+      P  +   L+   V  ++CG  HTA
Sbjct: 318 KAHSMALSMSGNIYSWGRND--FGQLGLGHTDGKDFPSLIEA-LDNQKVEFLACGGSHTA 374

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++T  G +FTFG G  G LGH    +   PR V  L G R  + ACG  HT A V  +  
Sbjct: 375 LLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDL-- 432

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                    GK+F++G G  G+LG+G    +L+P
Sbjct: 433 ---------GKVFSFGSGKEGQLGNGGTHNQLIP 457



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 114/212 (53%), Gaps = 14/212 (6%)

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACG 400
           +  ++CG +H+  ++  G+LF +G    G LG G +  S++ P+ V++L G+  V+ + G
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAG 317

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             H+ A+              SG +++WG  D G+LG G  + +  P+ + AL       
Sbjct: 318 KAHSMAL------------SMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEF 365

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH- 519
           ++CG S T  LT  G V+T G+  +GQLG      +L  R+  +L  N V +IACG  H 
Sbjct: 366 LACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHT 425

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
           +A ++   +V+++G G  G+LG+G T ++  P
Sbjct: 426 LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 457



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 27/235 (11%)

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           + SV  G  +  +++S G+ F +              S+   R    L+    ++  CG 
Sbjct: 218 IHSVDQGAEYMLILSSDGKPFEYN------------YSIEHARFQCILQEKXIIQITCGD 265

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQ 460
           +H+ A+               G+LF WG    G+LG G + A + +P  V  L      Q
Sbjct: 266 YHSLAL------------SKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQ 313

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYH 519
           +S G + ++AL+ +G++Y+ G   +GQLG    +GK  P+ +E  L    VE +ACG  H
Sbjct: 314 ISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEA-LDNQKVEFLACGGSH 372

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            A+LT    V+T+G G +G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 373 TALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLA 427



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 131/276 (47%), Gaps = 29/276 (10%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           PK ++      + ++  G  +  +++  G+ F +            +  + H +    L+
Sbjct: 207 PKCIKLGKKAKIHSVDQGAEYMLILSSDGKPFEY------------NYSIEHARFQCILQ 254

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIHV 342
              +  + CG++H+ A++  G+++ W G N + G LG G++  S+ +P+ +   L GI +
Sbjct: 255 EKXIIQITCGDYHSLALSKGGELFAW-GQNLH-GQLGIGSQFASIAIPQIVEN-LSGIPL 311

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 402
             +S G  H+  ++ +G ++++G   FG LG G       P  +++L   +    ACG  
Sbjct: 312 VQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGS 371

Query: 403 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS 462
           HTA + +             G +FT+G G  G+LGH   +  L P  V  L      Q++
Sbjct: 372 HTALLTK------------DGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIA 419

Query: 463 CGHSLTVA-LTTTGHVYTMGSPVYGQLGDPKANGKL 497
           CG   T+A ++  G V++ GS   GQLG+   + +L
Sbjct: 420 CGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQL 455



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 98/187 (52%), Gaps = 13/187 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+    G LG G      +A +     +P+ VE+   + +  I+ G  H+  ++
Sbjct: 275 GELFAWGQ-NLHGQLGIG----SQFASIA----IPQIVENLSGIPLVQISAGKAHSMALS 325

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G ++SWG    G+LG G       P LI+AL N  VE +ACG  HT  +T  G ++T+
Sbjct: 326 MSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTF 385

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G      G LGH +  +   P +L   L G  V+ ++CG  HT A V+  G++F+FG G 
Sbjct: 386 GAG--KHGQLGHNSTQNELRP-RLVTELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGK 442

Query: 369 FGVLGHG 375
            G LG+G
Sbjct: 443 EGQLGNG 449



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 7/148 (4%)

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           DG      +  + AR    C+  L E    Q++CG   ++AL+  G ++  G  ++GQLG
Sbjct: 234 DGKPFEYNYSIEHARF--QCI--LQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLG 289

Query: 490 --DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
                A+  +P  VE  L+   + +I+ G  H   L+    +Y+WG+   G+LG G TD 
Sbjct: 290 IGSQFASIAIPQIVEN-LSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDG 348

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           ++FPSL+EAL +++V+ + CG S TA +
Sbjct: 349 KDFPSLIEALDNQKVEFLACGGSHTALL 376


>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Hydra magnipapillata]
          Length = 364

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 132/265 (49%), Gaps = 20/265 (7%)

Query: 303 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE-GIHVSSVSCGPWHTAVVTSAGQL 361
           +GD+Y  G  N N G LG G+  S   PK +    +  I   +   GP H   VT +G+L
Sbjct: 40  NGDVYALG-FNGN-GCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMGP-HVLAVTDSGEL 96

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +++G G +G LGH      S P  V   K  + ++ ACG +H+ A+ E            
Sbjct: 97  YSWGHGGYGQLGHTSE-EKSKPVLVYMQK--KVIQVACGSYHSIALTE------------ 141

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            G+++ WG  + G+LG G    +  P  V+ +       VSCG S TV LTT G +Y+ G
Sbjct: 142 DGEVYAWGSNNCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWG 201

Query: 482 SPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
               GQLG      +L P RV G L   F+E+I CG  HV VLT   E+Y+WG  + G+L
Sbjct: 202 YNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQL 261

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSI 565
           G G T + + P+L+    D +   I
Sbjct: 262 GLGTTHNTSVPTLINTTTDDRWSDI 286



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 142/296 (47%), Gaps = 32/296 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACG-GRHAALV 248
           GDV+  G   G+G LG G    GS       +  PK +E     D+  +A G G H   V
Sbjct: 41  GDVYALG-FNGNGCLGVG---DGS------STLEPKIIEQLCQKDIVQLAYGMGPHVLAV 90

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           T  GE++SWG    G+LGH    + S P L+   K   V  VACG +H+ A+T  G++Y 
Sbjct: 91  TDSGELYSWGHGGYGQLGH-TSEEKSKPVLVYMQK--KVIQVACGSYHSIALTEDGEVYA 147

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG +NC  G LG G   +   PK+++  +    + SVSCG   T ++T+ G+L+++G   
Sbjct: 148 WGSNNC--GQLGLGISNNQATPKRVS-LIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNG 204

Query: 369 FGVLGHGDRISVSTP-REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            G LG  +  +   P R   SL G    +  CG+ H   + ++            G+L++
Sbjct: 205 NGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDI------------GELYS 252

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH--SLTVALTTTGHVYTMG 481
           WG    G+LG G      VPT +    +  +  ++  H   ++  +T +G +Y  G
Sbjct: 253 WGANSYGQLGLGTTHNTSVPTLINTTTDDRWSDIAAHHYNHISAGVTISGKIYMWG 308



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 152/323 (47%), Gaps = 35/323 (10%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
           SF+P ++ + V          G  A L    G+V++ G    G LG G  S    PK+I+
Sbjct: 11  SFIPSSLATKVK-KAFVFGGAGNEALLTLTNGDVYALGFNGNGCLGVGDGSSTLEPKIIE 69

Query: 281 ALKNINVELVACGEH-HTCAVTLSGDMYTWGGSNCNFGLLGHGNE-----MSLWLPKKLN 334
            L   ++  +A G   H  AVT SG++Y+WG  +  +G LGH +E     + +++ KK  
Sbjct: 70  QLCQKDIVQLAYGMGPHVLAVTDSGELYSWG--HGGYGQLGHTSEEKSKPVLVYMQKK-- 125

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
                  V  V+CG +H+  +T  G+++ +G    G LG G   + +TP+ V  +   + 
Sbjct: 126 -------VIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQATPKRVSLIPSKKI 178

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
           V  +CG   T  +             + G+L++WG    G+LG  +   +L P  V   +
Sbjct: 179 VSVSCGQSFTVMLT------------TDGELYSWGYNGNGQLGIENNTNQLQPVRVTGSL 226

Query: 455 EPNFCQ-VSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEE 512
              F + + CG +  + LT  G +Y+ G+  YGQLG     N  +PT +    T +   +
Sbjct: 227 FGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGLGTTHNTSVPTLIN-TTTDDRWSD 285

Query: 513 IACGDY-HV-AVLTSRTEVYTWG 533
           IA   Y H+ A +T   ++Y WG
Sbjct: 286 IAAHHYNHISAGVTISGKIYMWG 308



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 23/229 (10%)

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW-HTAAVVEVMVGSSSS 417
           G ++  G    G LG GD  S   P+ ++ L     V+ A G+  H  AV +        
Sbjct: 41  GDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLAVTD-------- 92

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
               SG+L++WG G  G+LGH  +E       V   ++    QV+CG   ++ALT  G V
Sbjct: 93  ----SGELYSWGHGGYGQLGHTSEEKS---KPVLVYMQKKVIQVACGSYHSIALTEDGEV 145

Query: 478 YTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           Y  GS   GQLG   +N +  P RV    +K  V  ++CG     +LT+  E+Y+WG   
Sbjct: 146 YAWGSNNCGQLGLGISNNQATPKRVSLIPSKKIVS-VSCGQSFTVMLTTDGELYSWGYNG 204

Query: 537 NGRLGHGDTDDRNFPSLVE-ALKDKQVKSIVCGTSFTAAIC----LHKW 580
           NG+LG  +  ++  P  V  +L  K ++ IVCG +    +     L+ W
Sbjct: 205 NGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSW 253


>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
          Length = 1271

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 43/337 (12%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG------------GSNCNFGLLG 320
           V  PK +  L    +  VACG  H   +T +GD+Y++G             +N N     
Sbjct: 485 VLRPKQVSLLNGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKAAAVTIATNANSADND 544

Query: 321 HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV 380
           +   +S  L   L   L    ++ +SCG  H+  +T AG+L+T+G G  G LGHGD    
Sbjct: 545 YTRSISKEL--ALEKALHRTTIAMISCGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDR 602

Query: 381 STPREVDSLKGLRTVRAACGV----WHTAA-----------VVEVMVGSSSSSNCS-SGK 424
           + PR+V SL       A+CG+    W               +  V+ G + ++     G 
Sbjct: 603 AVPRKVMSLLRESVASASCGLGDNKWRDTPHQIVGFPQGTRISNVVCGWNFTAALDRQGN 662

Query: 425 LFTWGDGDRGR--LGHGDKEARLVPTCVAALVE----PNFCQVSCGHSLTVALTTTGHVY 478
           +FTWG    G+  LG+ DK+ ++VP CV  L E         V+CG++ TV LT +G +Y
Sbjct: 663 IFTWGKTGEGQCGLGYVDKD-QVVPRCVEKLREVAAGSAAVDVACGYTHTVVLTASGELY 721

Query: 479 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
           + G   YGQL    A  +LP+  +     + +  + CG +H    T +  ++ WG  + G
Sbjct: 722 SWGLGEYGQL----ARVQLPS--DALCAPDQLTRVYCGAFHSIATTEKRVMFAWGLNSYG 775

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G G T +++ P  ++    +    + CG  +T A+
Sbjct: 776 ACGLGHTANKDKPERIDCFSSQTELVVACGHKYTIAL 812



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 117/276 (42%), Gaps = 52/276 (18%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL------------ 282
           +  I+CG +H+  +T  GE+++WG    GRLGHG   D + P+ + +L            
Sbjct: 564 IAMISCGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVASASCGL 623

Query: 283 ----------------KNINVELVACGEHHTCAVTLSGDMYTWGGS---NCNFGLLGHGN 323
                           +   +  V CG + T A+   G+++TWG +    C  G +   +
Sbjct: 624 GDNKWRDTPHQIVGFPQGTRISNVVCGWNFTAALDRQGNIFTWGKTGEGQCGLGYVDK-D 682

Query: 324 EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 383
           ++     +KL     G     V+CG  HT V+T++G+L+++G G +G L    R+ + + 
Sbjct: 683 QVVPRCVEKLREVAAGSAAVDVACGYTHTVVLTASGELYSWGLGEYGQLA---RVQLPS- 738

Query: 384 REVDSLKGL-RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE 442
              D+L    +  R  CG +H+ A  E  V            +F WG    G  G G   
Sbjct: 739 ---DALCAPDQLTRVYCGAFHSIATTEKRV------------MFAWGLNSYGACGLGHTA 783

Query: 443 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
            +  P  +          V+CGH  T+AL     +Y
Sbjct: 784 NKDKPERIDCFSSQTELVVACGHKYTIALEVDPALY 819



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 18/193 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNI----NVEL 289
           + N+ CG    A + +QG +F+WG+   G+ G G VD D   P+ ++ L+ +        
Sbjct: 644 ISNVVCGWNFTAALDRQGNIFTWGKTGEGQCGLGYVDKDQVVPRCVEKLREVAAGSAAVD 703

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK-LNGPLEGIHVSSVSCG 348
           VACG  HT  +T SG++Y+W       GL  +G    + LP   L  P +   ++ V CG
Sbjct: 704 VACGYTHTVVLTASGELYSW-------GLGEYGQLARVQLPSDALCAPDQ---LTRVYCG 753

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA-- 406
            +H+   T    +F +G  ++G  G G   +   P  +D       +  ACG  +T A  
Sbjct: 754 AFHSIATTEKRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTELVVACGHKYTIALE 813

Query: 407 VVEVMVGSSSSSN 419
           V   + G SSSS+
Sbjct: 814 VDPALYGHSSSSS 826



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 94/223 (42%), Gaps = 47/223 (21%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE--------SAVVLDVQNI 238
           D  G++F WG+ TG+G  G G         V  D  VP+ VE        SA V    ++
Sbjct: 658 DRQGNIFTWGK-TGEGQCGLGY--------VDKDQVVPRCVEKLREVAAGSAAV----DV 704

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL-KNINVELVACGEHHT 297
           ACG  H  ++T  GE++SWG    G+L       V  P   DAL     +  V CG  H+
Sbjct: 705 ACGYTHTVVLTASGELYSWGLGEYGQLAR-----VQLPS--DALCAPDQLTRVYCGAFHS 757

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A T    M+ WG +  ++G  G G+  +   P++++            C    T +V +
Sbjct: 758 IATTEKRVMFAWGLN--SYGACGLGHTANKDKPERID------------CFSSQTELVVA 803

Query: 358 AGQLFTFG-DGTFGVLGHGDRIS---VSTPREVDSLKGLRTVR 396
            G  +T   +    + GH    S   V T   VD L   RT R
Sbjct: 804 CGHKYTIALEVDPALYGHSSSSSHAMVRTGAAVDGLAIPRTQR 846


>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 417

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 42/365 (11%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           +  IACGG H   +T+ G V++ G    G+LG       S   L    +   V  ++ G 
Sbjct: 67  LNAIACGGAHTLFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGY 126

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCGPWHT 352
           +H+CA+T+ G++Y WG +    G LG G      + LP K+   L+GI++   + G  H+
Sbjct: 127 NHSCAITVDGELYMWGKNTS--GQLGLGKRAPNIVPLPTKVE-YLKGINIKMAALGSEHS 183

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISV---------STPREVDSLKGLRTVRAACGVWH 403
             ++  G  F++G G  G LGHG   SV          TPR +  L+G++    A G+ +
Sbjct: 184 VAISDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLN 243

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           +A   E            +G +F +G+    +L   +      P+ ++ L  P+  +V+C
Sbjct: 244 SACTDE------------NGCVFVFGERGIEKLRLKEMSDATKPSLISEL--PSSKEVAC 289

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAV 522
           G   T  LT +G +YT GS   G LG   ++   LP +V+G   K+ V +++CG  H A 
Sbjct: 290 GGYHTCVLTNSGELYTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAA 349

Query: 523 LTSRTEVYTWGKG------------ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           + S   V+TWG G            ++G+LGHG   D   P+ V   +D +   + CG +
Sbjct: 350 I-SEGRVFTWGWGGSNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFN 408

Query: 571 FTAAI 575
            T AI
Sbjct: 409 HTGAI 413



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 150/347 (43%), Gaps = 38/347 (10%)

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           G R AAL         WG    GRLG G       P +  A +N  +  +ACG  HT  +
Sbjct: 30  GKRFAAL---------WGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFL 80

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           T  G +Y  G ++  FG LG  +E   +  + L    E   V  +S G  H+  +T  G+
Sbjct: 81  TEDGCVYATGLND--FGQLGV-SESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDGE 137

Query: 361 LFTFGDGTFGVLGHGDRIS--VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
           L+ +G  T G LG G R    V  P +V+ LKG+    AA G  H+ A+ +         
Sbjct: 138 LYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISD--------- 188

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARL---------VPTCVAALVEPNFCQVSCGHSLTV 469
               G  F+WG G  GRLGHG + + L          P  +  L       V+ G   + 
Sbjct: 189 ---GGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSA 245

Query: 470 ALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
                G V+  G     +L   + +      +  +L  +  +E+ACG YH  VLT+  E+
Sbjct: 246 CTDENGCVFVFGERGIEKLRLKEMSDATKPSLISELPSS--KEVACGGYHTCVLTNSGEL 303

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAAI 575
           YTWG   NG LG G +D  + P  V+       V  + CG   TAAI
Sbjct: 304 YTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAI 350



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 131/293 (44%), Gaps = 86/293 (29%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVP--KAVESAVVLDVQNIACGGRHAAL 247
           G++++WG+ T  G LG          G +  + VP    VE    ++++  A G  H+  
Sbjct: 136 GELYMWGKNT-SGQLG---------LGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVA 185

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDV---------SHPKLIDALKNINVELVA------- 291
           ++  G  FSWG  + GRLGHG +S V           P+LI  L+ I V+ VA       
Sbjct: 186 ISDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSA 245

Query: 292 -------------------------------------------CGEHHTCAVTLSGDMYT 308
                                                      CG +HTC +T SG++YT
Sbjct: 246 CTDENGCVFVFGERGIEKLRLKEMSDATKPSLISELPSSKEVACGGYHTCVLTNSGELYT 305

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG--- 365
           WG SN N G LG G+   + LP+K+ GP     VS VSCG  HTA + S G++FT+G   
Sbjct: 306 WG-SNEN-GCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAI-SEGRVFTWGWGG 362

Query: 366 -DGTF--------GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            +GTF        G LGHG  +    P  V   + ++ ++ +CG  HT A++E
Sbjct: 363 SNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILE 415


>gi|351707650|gb|EHB10569.1| X-linked retinitis pigmentosa GTPase regulator [Heterocephalus
           glaber]
          Length = 1209

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 175/379 (46%), Gaps = 75/379 (19%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H+A+VT   +++ +G    G+LG G  S V+ P  + ALK   V+L ACG +HT
Sbjct: 15  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVQLAACGRNHT 74

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
             +T+ G +Y  GG+N   G LG G+        +++      ++  +S G   +A +++
Sbjct: 75  LVLTVEGSVYAAGGNNE--GQLGLGDTEERNTFHRISFFTSQHNIKQLSAGSNTSAALSA 132

Query: 358 A----------------------------------GQLFTFGDGTFGVLGHGDRISVSTP 383
                                              G+LF +GD + G +G  + I+V  P
Sbjct: 133 TWFHATKMQRTLDHQTTVLELIKFSAFKEFLPREDGRLFVWGDNSEGQIGLNNIINVCVP 192

Query: 384 REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA 443
            +V+  K +  V  ACG +H+A V               G+L+T+G+ + G+LG   KE 
Sbjct: 193 HQVNIGKPISWV--ACGYYHSAFVT------------MDGELYTFGESESGKLGL-PKEL 237

Query: 444 RL---VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---------DP 491
            +    P  VA + E    QV+CG   TV LT    VY  G   +GQLG         +P
Sbjct: 238 LINHRTPQLVAGIPE-KVIQVACGGGHTVVLTEKA-VYAFGLGQFGQLGLGTFLFETSEP 295

Query: 492 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN-- 549
           K   ++  +   K+T      I+CG+ H A++T +  VYT+G G +G+LG G  +  N  
Sbjct: 296 KVIEQIKDQ---KITY-----ISCGENHTALITDKGLVYTFGDGRHGKLGLGVENFTNQF 347

Query: 550 FPSLVEALKDKQVKSIVCG 568
           FP +        V+ + CG
Sbjct: 348 FPIVCSEFLRFTVQLVACG 366



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 148/315 (46%), Gaps = 39/315 (12%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           ++CG+ H+  VT +  +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG 
Sbjct: 15  LSCGDEHSAVVTGNNKLYMFGSNN--WGQLGLGSKSTVNKPTCVKA-LKPEKVQLAACGR 71

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGD--------RISVSTPRE-VDSLK-GLRTVRAAC 399
            HT V+T  G ++  G    G LG GD        RIS  T +  +  L  G  T  A  
Sbjct: 72  NHTLVLTVEGSVYAAGGNNEGQLGLGDTEERNTFHRISFFTSQHNIKQLSAGSNTSAALS 131

Query: 400 GVW-----------HTAAVVEVMVGSSSSSNC--SSGKLFTWGDGDRGRLGHGDKEARLV 446
             W           H   V+E++  S+         G+LF WGD   G++G  +    ++
Sbjct: 132 ATWFHATKMQRTLDHQTTVLELIKFSAFKEFLPREDGRLFVWGDNSEGQIGLNN----II 187

Query: 447 PTCVAALVEPN--FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA---NGKLPTRV 501
             CV   V        V+CG+  +  +T  G +YT G    G+LG PK    N + P  V
Sbjct: 188 NVCVPHQVNIGKPISWVACGYYHSAFVTMDGELYTFGESESGKLGLPKELLINHRTPQLV 247

Query: 502 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDK 560
            G   K  V ++ACG  H  VLT +  VY +G G  G+LG G    + + P ++E +KD+
Sbjct: 248 AGIPEK--VIQVACGGGHTVVLTEKA-VYAFGLGQFGQLGLGTFLFETSEPKVIEQIKDQ 304

Query: 561 QVKSIVCGTSFTAAI 575
           ++  I CG + TA I
Sbjct: 305 KITYISCGENHTALI 319



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 8/111 (7%)

Query: 212 GSYAGVKMDSFV-----PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 266
           G +  + + +F+     PK +E      +  I+CG  H AL+T +G V+++G+   G+LG
Sbjct: 278 GQFGQLGLGTFLFETSEPKVIEQIKDQKITYISCGENHTALITDKGLVYTFGDGRHGKLG 337

Query: 267 HGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 315
            GV++  +   P +        V+LVACG   T  V  S  +   G SN N
Sbjct: 338 LGVENFTNQFFPIVCSEFLRFTVQLVACGGCQTL-VFASPRINVVGESNFN 387


>gi|156398544|ref|XP_001638248.1| predicted protein [Nematostella vectensis]
 gi|156225367|gb|EDO46185.1| predicted protein [Nematostella vectensis]
          Length = 676

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 147/332 (44%), Gaps = 54/332 (16%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSC 347
           V+CG      VT +G M  W GS  + GL+  G  NE ++W+P+ L G   GI ++ VSC
Sbjct: 343 VSCGRTLMTGVTANGRMILWEGSKSS-GLMSSGGKNEKTVWVPRFLEGQ-SGITITKVSC 400

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G   TA +T  G L TFG GT+G LGHG    VS  + V+ L G      +CG  H  AV
Sbjct: 401 GDLFTACLTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVEDLLGFEVEDISCGSSHIMAV 460

Query: 408 V---EVM---------VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTC------ 449
               EV          +G+ S     S K  +  +G R R  H   +     T       
Sbjct: 461 TADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFAITLENKLLA 520

Query: 450 --------------------VAALVE---PNF-----CQVSCGHSLTVALTTTGHVYTMG 481
                               VA L +   P+F       V+ G S T+ L   G +Y+ G
Sbjct: 521 CGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMGTSHTLVLLQNGKLYSFG 580

Query: 482 SPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
           S  +GQLG  +    + P  VE   + N V  +ACGD     ++S +EV+ WGKGA GRL
Sbjct: 581 SNSFGQLGYVREGVSRFPQLVE---SLNDVSYVACGDTFSVAVSSDSEVFVWGKGARGRL 637

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           G+   +D   P  +      QV S+ C  S T
Sbjct: 638 GNKADEDVREPVCLSLPAAVQVLSVSCSNSGT 669



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 116/259 (44%), Gaps = 39/259 (15%)

Query: 225 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN 284
           K VE  +  +V++I+CG  H   VT   EVF+WG    GRLG G   +   PK I   + 
Sbjct: 437 KIVEDLLGFEVEDISCGSSHIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEG 496

Query: 285 INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV-- 342
           +    V CG   + A+TL   +   G + CN   L   NE         +GP+E + V  
Sbjct: 497 MRARSVHCGVDCSFAITLENKLLACGSNRCN--KLALDNE---------DGPVEEVAVLR 545

Query: 343 ------------SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK 390
                       SSV+ G  HT V+   G+L++FG  +FG LG+        P+ V+SL 
Sbjct: 546 QVSVPDFNSVGTSSVAMGTSHTLVLLQNGKLYSFGSNSFGQLGYVREGVSRFPQLVESLN 605

Query: 391 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
            +  V  ACG   + AV             S  ++F WG G RGRLG+   E    P C+
Sbjct: 606 DVSYV--ACGDTFSVAV------------SSDSEVFVWGKGARGRLGNKADEDVREPVCL 651

Query: 451 AALVEPNFCQVSCGHSLTV 469
           +         VSC +S T+
Sbjct: 652 SLPAAVQVLSVSCSNSGTL 670



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 25/276 (9%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           +VP+ +E    + +  ++CG    A +T +G + ++G    G LGHG  + VS  K+++ 
Sbjct: 382 WVPRFLEGQSGITITKVSCGDLFTACLTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVED 441

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
           L    VE ++CG  H  AVT   +++ WG G N   G LG G++   W PK ++ P EG+
Sbjct: 442 LLGFEVEDISCGSSHIMAVTADHEVFAWGRGDN---GRLGTGSQQEYWSPKAISLP-EGM 497

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL------GHGDRISVSTPREVDSLKGLRT 394
              SV CG   +  +T   +L   G      L      G  + ++V     V     + T
Sbjct: 498 RARSVHCGVDCSFAITLENKLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGT 557

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
              A G  HT  +++            +GKL+++G    G+LG+  +     P  V +L 
Sbjct: 558 SSVAMGTSHTLVLLQ------------NGKLYSFGSNSFGQLGYVREGVSRFPQLVESLN 605

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
           + ++  V+CG + +VA+++   V+  G    G+LG+
Sbjct: 606 DVSY--VACGDTFSVAVSSDSEVFVWGKGARGRLGN 639



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 4/192 (2%)

Query: 403 HTAAVVEVMVGSSSSSNCSS-GKLFTW-GDGDRGRLGHGDKEARLV--PTCVAALVEPNF 458
           H + VV+V  G +  +  ++ G++  W G    G +  G K  + V  P  +        
Sbjct: 336 HDSGVVQVSCGRTLMTGVTANGRMILWEGSKSSGLMSSGGKNEKTVWVPRFLEGQSGITI 395

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDY 518
            +VSCG   T  LT  G + T GS  YG LG    N     ++   L    VE+I+CG  
Sbjct: 396 TKVSCGDLFTACLTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVEDLLGFEVEDISCGSS 455

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
           H+  +T+  EV+ WG+G NGRLG G   +   P  +   +  + +S+ CG   + AI L 
Sbjct: 456 HIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFAITLE 515

Query: 579 KWVSGVDQSMCS 590
             +     + C+
Sbjct: 516 NKLLACGSNRCN 527


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 15/215 (6%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVAC 292
           ++  I CG  H+  ++K GE+F+WG+ L G+LG G +    + P++++ L  + +  ++ 
Sbjct: 37  NIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISA 96

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+ H+ A+++SG++Y+WG +  +FG LG G+      P  +   LE   V  ++CG  HT
Sbjct: 97  GKSHSMALSVSGNIYSWGRN--DFGQLGLGHTDDKDFPSLIEA-LENQKVEFLACGGSHT 153

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           A++T  G +FTFG G +G LGH    +   P  V  L G R  + ACG  HT A V  + 
Sbjct: 154 ALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDL- 212

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                     GK+F++G G+ G+LG+G    +L+P
Sbjct: 213 ----------GKVFSFGSGEEGQLGNGGTHNQLIP 237



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 14/229 (6%)

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTV 395
           L+  ++  ++CG +H+  ++  G+LF +G    G LG G    S + P+ V+ L G+   
Sbjct: 33  LQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLA 92

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
           + + G  H+ A+              SG +++WG  D G+LG G  + +  P+ + AL  
Sbjct: 93  QISAGKSHSMAL------------SVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALEN 140

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 515
                ++CG S T  LT  G V+T G+  YGQLG      +L   +  KL  N V ++AC
Sbjct: 141 QKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVAC 200

Query: 516 GDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
           G  H +A ++   +V+++G G  G+LG+G T ++  P  ++   ++++K
Sbjct: 201 GRQHTLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPMKLPSNEELK 249



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 27/258 (10%)

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           G  H  +++  G+ F +            +  + H +    L+  N+  + CG++H+ A+
Sbjct: 4   GAEHMLILSSDGKPFEY------------NYSIEHARFQCILQEKNIIQITCGDYHSLAL 51

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           +  G+++ WG  N + G LG G         ++   L G+ ++ +S G  H+  ++ +G 
Sbjct: 52  SKGGELFAWG-QNLH-GQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSHSMALSVSGN 109

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           ++++G   FG LG G       P  +++L+  +    ACG  HTA + +           
Sbjct: 110 IYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTK----------- 158

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA-LTTTGHVYT 479
             G +FT+G G  G+LGH   +  L P  V  L      QV+CG   T+A ++  G V++
Sbjct: 159 -DGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFS 217

Query: 480 MGSPVYGQLGDPKANGKL 497
            GS   GQLG+   + +L
Sbjct: 218 FGSGEEGQLGNGGTHNQL 235



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 97/190 (51%), Gaps = 19/190 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+     +  G I  S +          P+ VE    + +  I+ G  H+  ++
Sbjct: 55  GELFAWGQNLHGQLGVGKIFDSTT---------APQIVEHLSGVPLAQISAGKSHSMALS 105

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G ++SWG    G+LG G   D   P LI+AL+N  VE +ACG  HT  +T  G ++T+
Sbjct: 106 VSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTKDGLVFTF 165

Query: 310 GGSNCNFGLLGHG---NEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFG 365
           G     +G LGH    NE+   L  KL G      V+ V+CG  HT A V+  G++F+FG
Sbjct: 166 GAG--KYGQLGHNSTQNELRPCLVTKLAGN----RVTQVACGRQHTLAYVSDLGKVFSFG 219

Query: 366 DGTFGVLGHG 375
            G  G LG+G
Sbjct: 220 SGEEGQLGNG 229



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 27/229 (11%)

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
           G  H  +++S G+ F +              S+   R    L+    ++  CG +H+ A+
Sbjct: 4   GAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKNIIQITCGDYHSLAL 51

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHS 466
                          G+LF WG    G+LG G   ++   P  V  L      Q+S G S
Sbjct: 52  ------------SKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKS 99

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            ++AL+ +G++Y+ G   +GQLG    + K  P+ +E  L    VE +ACG  H A+LT 
Sbjct: 100 HSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEA-LENQKVEFLACGGSHTALLTK 158

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
              V+T+G G  G+LGH  T +   P LV  L   +V  + CG   T A
Sbjct: 159 DGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLA 207



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 7/148 (4%)

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           DG      +  + AR    C+  L E N  Q++CG   ++AL+  G ++  G  ++GQLG
Sbjct: 14  DGKPFEYNYSIEHARF--QCI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLG 69

Query: 490 DPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
             K   +   P  VE  L+   + +I+ G  H   L+    +Y+WG+   G+LG G TDD
Sbjct: 70  VGKIFDSTTAPQIVE-HLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDD 128

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           ++FPSL+EAL++++V+ + CG S TA +
Sbjct: 129 KDFPSLIEALENQKVEFLACGGSHTALL 156


>gi|403352385|gb|EJY75705.1| hypothetical protein OXYTRI_02905 [Oxytricha trifallax]
          Length = 923

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 178/434 (41%), Gaps = 115/434 (26%)

Query: 207 GIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 265
           G ++ G  A GV  D+ +P+ V     +  + I+    H A++T+ G++   G  L G+L
Sbjct: 173 GKNQEGELALGVYKDALLPRFVTGVKGMTAKWISSSNHHTAMITQDGQIVVSGSSLHGKL 232

Query: 266 G-HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 324
           G     ++++  +++  L+    + V+CG++HT  +   G +Y +GG             
Sbjct: 233 GIESNKTNINKFQIVPTLQRKRAKQVSCGDYHTLVLIEDGTVYQFGG------------- 279

Query: 325 MSLWLPK--KLNGP-----------------LEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            SL+  K  K+N P                 L G  +  + CG +H+A +   G L+T+G
Sbjct: 280 -SLFKDKKDKINRPQNPTQQIAPNVPQPVQALYGREIVQIDCGDFHSAALDGNGDLYTWG 338

Query: 366 DG----TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            G      G  GHG   ++  P +V  L   R ++ ACG +HT A+             S
Sbjct: 339 GGAPSYNKGQCGHGHNNALEYPEKVKYLSSKRIIKVACGGFHTLALT------------S 386

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV--------------------------- 454
             +L+ +G G+ G  G+G+     + T    L+                           
Sbjct: 387 ENELYGFGSGNYGECGNGE----FMDTSKPKLIKFPNDHLDTKKNVTDDLEEYGHDEEFV 442

Query: 455 -------EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTK 507
                  +P     + G   ++ +T  G +Y+ G    GQLG+                 
Sbjct: 443 LEMYLKEQPQILDFAAGGRHSLIITNKGRLYSFGYGTNGQLGN----------------- 485

Query: 508 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
             V + A G  H  +LT R +V++ G G +G+LGHGD + R   + V++L +K +  I  
Sbjct: 486 --VVQCAAGWNHSMILTERGDVFSCGYGGHGQLGHGDKESRTQFTFVQSLGNKNISKIFA 543

Query: 568 GTSFTAAICLHKWV 581
           G S       H WV
Sbjct: 544 GGS-------HSWV 550



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 70/298 (23%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG----EELGGRLGHGVDSDVSHPKL 278
           VP+ V++    ++  I CG  H+A +   G++++WG        G+ GHG ++ + +P+ 
Sbjct: 303 VPQPVQALYGREIVQIDCGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYPEK 362

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
           +  L +  +  VACG  HT A+T   ++Y +G  N  +G  G+G  M    PK +  P +
Sbjct: 363 VKYLSSKRIIKVACGGFHTLALTSENELYGFGSGN--YGECGNGEFMDTSKPKLIKFPND 420

Query: 339 GI-----------------------------HVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            +                              +   + G  H+ ++T+ G+L++FG GT 
Sbjct: 421 HLDTKKNVTDDLEEYGHDEEFVLEMYLKEQPQILDFAAGGRHSLIITNKGRLYSFGYGTN 480

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LG+                    V+ A G  H+  + E             G +F+ G
Sbjct: 481 GQLGN-------------------VVQCAAGWNHSMILTE------------RGDVFSCG 509

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTV--ALTTTGHVYTMGSP 483
            G  G+LGHGDKE+R   T V +L   N  ++  G  HS  V  ++  T   +T  SP
Sbjct: 510 YGGHGQLGHGDKESRTQFTFVQSLGNKNISKIFAGGSHSWVVLDSVVPTRDKWTAPSP 567



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 14/260 (5%)

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           Y W       G L  G      LP+ + G ++G+    +S    HTA++T  GQ+   G 
Sbjct: 168 YVWAFGKNQEGELALGVYKDALLPRFVTG-VKGMTAKWISSSNHHTAMITQDGQIVVSGS 226

Query: 367 GTFGVLG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
              G LG   ++ +++  + V +L+  R  + +CG +HT  ++E       +     G L
Sbjct: 227 SLHGKLGIESNKTNINKFQIVPTLQRKRAKQVSCGDYHTLVLIE-----DGTVYQFGGSL 281

Query: 426 FTWGDGDRGRLGHGDKE-ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG--S 482
           F        R  +  ++ A  VP  V AL      Q+ CG   + AL   G +YT G  +
Sbjct: 282 FKDKKDKINRPQNPTQQIAPNVPQPVQALYGREIVQIDCGDFHSAALDGNGDLYTWGGGA 341

Query: 483 PVY--GQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           P Y  GQ G    N  + P +V+   +K  ++ +ACG +H   LTS  E+Y +G G  G 
Sbjct: 342 PSYNKGQCGHGHNNALEYPEKVKYLSSKRIIK-VACGGFHTLALTSENELYGFGSGNYGE 400

Query: 540 LGHGDTDDRNFPSLVEALKD 559
            G+G+  D + P L++   D
Sbjct: 401 CGNGEFMDTSKPKLIKFPND 420


>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
           musculus]
 gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
          Length = 557

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 164/339 (48%), Gaps = 29/339 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  + +  P  I ALK   V+L ACG +HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T +G +Y  GG+N     LG  ++   +       P + I    +S G   +A +T 
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 195

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  D+ +V  P EV   K +  +  +CG +H+A V          
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 244

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDK--EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                G+L+T+G+ + G+LG  ++       P  V  + E    QV+CG   TV LT   
Sbjct: 245 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK- 299

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE----IACGDYHVAVLTSRTEVYT 531
            VY  G   +GQLG       L    E K+ +   ++    I+CG+ H A++T    +YT
Sbjct: 300 VVYAFGLGQFGQLG---LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYT 356

Query: 532 WGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +G G +G+LG G  +  N  FP+L        V+ I CG
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 157/335 (46%), Gaps = 35/335 (10%)

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           +LV   G VF++G+    +    + S           KN     ++CG+ HT  VT +  
Sbjct: 44  SLVPDTGAVFTFGKT---KFAENIPSKF-------WFKNDIPICLSCGDEHTAIVTGNNK 93

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG  HT V T  G ++  G
Sbjct: 94  LYMFGSNN--WGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGRNHTLVSTDTGGVYAAG 150

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGSSSSSNCSSGK 424
               G LG GD     T  ++       T++  + G   +AA+ E             GK
Sbjct: 151 GNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE------------DGK 198

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           LF WGD   G++G  DK    +P  V   V      +SCG+  +  +T  G +YT G P 
Sbjct: 199 LFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSAFVTMDGELYTFGEPE 256

Query: 485 YGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            G+LG P     N + P RV G   +  V ++ACG  H  VLT +  VY +G G  G+LG
Sbjct: 257 NGKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTEKV-VYAFGLGQFGQLG 313

Query: 542 HGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            G    + + P ++E +KD+++  I CG + TA +
Sbjct: 314 LGTFLFETSEPKIIERIKDQKICHISCGENHTALM 348



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 152/322 (47%), Gaps = 37/322 (11%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDV 273
           G K     P  +++     V+  ACG  H  + T  G V++ G    G+LG G   D D 
Sbjct: 108 GSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT 167

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
            H +++       ++ ++ G + + A+T  G ++ WG ++   G +G  ++ ++ +P ++
Sbjct: 168 FH-QIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEV 224

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKG 391
                G  +S +SCG +H+A VT  G+L+TFG+   G LG  + + ++  +P+ V  +  
Sbjct: 225 T---VGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE 281

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCV 450
            R ++ ACG  HT  + E +V             + +G G  G+LG G        P  +
Sbjct: 282 -RVIQVACGGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKII 327

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTK 507
             + +   C +SCG + T  +T  G +YT G   +G+LG   +   N   PT     L  
Sbjct: 328 ERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPT-----LCS 382

Query: 508 NF----VEEIACGDYHVAVLTS 525
           NF    V+ IACG  H+ V  +
Sbjct: 383 NFLRFAVQLIACGGCHMLVFAT 404



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 36/264 (13%)

Query: 129 PPKVLLPSESACGSVNSLSS----------GGSDGRTGHLKGLSGDTFR--VSLSSAVSS 176
           P KV L   +ACG  ++L S          G ++G+ G       DTF   V  + A + 
Sbjct: 124 PEKVKL---AACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI 180

Query: 177 SSQGSGHDDGDSL---GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
               +G +   +L   G +F+WG+             S    G++  S V    E  V  
Sbjct: 181 KQLSAGANTSAALTEDGKLFMWGD------------NSEGQIGLEDKSNVCIPHEVTVGK 228

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVA 291
            +  I+CG  H+A VT  GE++++GE   G+LG   +  ++H  P+ +  +    ++ VA
Sbjct: 229 PISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VA 287

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           CG  HT  +T    +Y +G     FG LG G  +      K+   ++   +  +SCG  H
Sbjct: 288 CGGGHTVVLT-EKVVYAFGLG--QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENH 344

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHG 375
           TA++T  G L+TFGDG  G LG G
Sbjct: 345 TALMTELGLLYTFGDGRHGKLGLG 368


>gi|403350318|gb|EJY74616.1| hypothetical protein OXYTRI_04126 [Oxytricha trifallax]
 gi|403370253|gb|EJY84990.1| hypothetical protein OXYTRI_17158 [Oxytricha trifallax]
          Length = 1116

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 180/405 (44%), Gaps = 80/405 (19%)

Query: 253 EVFSWGEELGGRLGHG--------VDSDVSHPK--LI----DALKNIN----------VE 288
           E++ WG +  G+LG G         + D+ +    +I    D  + +N          ++
Sbjct: 14  EIYVWGNDEYGQLGLGHRYNQTSKQEQDLQNKNHSIISASYDETRKLNIPKSCTFQTKIK 73

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL-PK---------KLNGPLE 338
            VACGE H+C +TL G +Y+ G +   F  LG  N  +    PK         KL   L 
Sbjct: 74  EVACGEDHSCLLTLQGHVYSMGSN--QFNKLGVKNLNTFQTSPKNGFEYSNTPKLVELLV 131

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL--------- 389
              V S+SCG  HTA V+  G  FT+G   +G LG G +IS    R   S+         
Sbjct: 132 NYEVISISCGWNHTACVSIDGLSFTWGQYEYGQLGLG-KISSQQRRNESSVFQQGIFPSI 190

Query: 390 ------KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG--DK 441
                   ++ V  ACG  HT  +              +G++++ GD   G+LG G  D 
Sbjct: 191 VEFFQQNNIKIVNVACGGKHTLFL------------SRNGQVYSMGDNSFGQLGIGMQDI 238

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV 501
           + + +PT V +L   N  ++S GH  + AL+++G ++  G+ V+G   +PK         
Sbjct: 239 QYKDIPTRVPSL--SNITKISSGHH-SAALSSSGQLFFWGTGVFGSFYEPK--------- 286

Query: 502 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 561
            G +  + + +++ G    A L     ++TWG  + G LG GD + R +P  V  LK+K+
Sbjct: 287 -GVIDSDII-DVSVGGCFGAALDRDGLIWTWGSNSKGELGVGDFEPRPYPYPVTYLKNKK 344

Query: 562 VKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCY 606
           V  + CG SF  AI   K    +  +     ++  + +   HN Y
Sbjct: 345 VNKVACGGSFALAIGNSKDKDNLSNASNPKLQVQLDAQSMMHNNY 389



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 45/267 (16%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH----- 275
           S  PK VE  V  +V +I+CG  H A V+  G  F+WG+   G+LG G  S         
Sbjct: 121 SNTPKLVELLVNYEVISISCGWNHTACVSIDGLSFTWGQYEYGQLGLGKISSQQRRNESS 180

Query: 276 -------PKLIDALKNINVEL--VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS 326
                  P +++  +  N+++  VACG  HT  ++ +G +Y+ G +  +FG LG G  M 
Sbjct: 181 VFQQGIFPSIVEFFQQNNIKIVNVACGGKHTLFLSRNGQVYSMGDN--SFGQLGIG--MQ 236

Query: 327 LWLPKKLNGPLEGI-HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPRE 385
               K +   +  + +++ +S G  H+A ++S+GQLF +G G FG        S   P+ 
Sbjct: 237 DIQYKDIPTRVPSLSNITKISSG-HHSAALSSSGQLFFWGTGVFG--------SFYEPK- 286

Query: 386 VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEAR 444
                         GV   + +++V VG    +     G ++TWG   +G LG GD E R
Sbjct: 287 --------------GVI-DSDIIDVSVGGCFGAALDRDGLIWTWGSNSKGELGVGDFEPR 331

Query: 445 LVPTCVAALVEPNFCQVSCGHSLTVAL 471
             P  V  L      +V+CG S  +A+
Sbjct: 332 PYPYPVTYLKNKKVNKVACGGSFALAI 358



 Score = 43.9 bits (102), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 181 SGHDDG--DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNI 238
           SGH      S G +F WG     G+ G                + PK V  + ++DV   
Sbjct: 258 SGHHSAALSSSGQLFFWGT----GVFGSF--------------YEPKGVIDSDIIDV--- 296

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           + GG   A + + G +++WG    G LG G      +P  +  LKN  V  VACG     
Sbjct: 297 SVGGCFGAALDRDGLIWTWGSNSKGELGVGDFEPRPYPYPVTYLKNKKVNKVACGGSFAL 356

Query: 299 AVTLSGD 305
           A+  S D
Sbjct: 357 AIGNSKD 363


>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
 gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
 gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
 gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 158/334 (47%), Gaps = 34/334 (10%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKL 278
           +F P  +E      V  ++    H+A V + G+V + G+      GH +D+   +  PKL
Sbjct: 153 AFTP--IEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGH-LDTSRPIFRPKL 209

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK-----KL 333
           ++ALK    + VA G H T  ++  G  YT G SN + G LGHG+ +   +PK     K 
Sbjct: 210 VEALKGTPCKQVAAGLHFTVFLSREGHAYTCG-SNTH-GQLGHGDTLDRPVPKVVEFLKT 267

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK--G 391
            GP     V  ++ GP +   VT  G +++FG G+   LGHG++     PR + + K  G
Sbjct: 268 IGP-----VVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKG 322

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
           +  +R + G  H  A+             S+G+++TWG G  G LGHGD+  ++ P  + 
Sbjct: 323 IHILRVSAGDEHAVALD------------SNGRVYTWGKGYCGALGHGDENDKITPQVLV 370

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKN 508
            L      QV      T  L   G +Y  G   +G LG P    ++  L  RV   L  +
Sbjct: 371 NLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPH 430

Query: 509 FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            V +++ G YH  V+T R  ++ +G     +LGH
Sbjct: 431 RVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGH 464



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 130/286 (45%), Gaps = 20/286 (6%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F PK VE+      + +A G      ++++G  ++ G    G+LGHG   D   PK+++ 
Sbjct: 205 FRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEF 264

Query: 282 LKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEG 339
           LK I  V  +A G  +  AVT  G +Y++G S  NF  LGHG +     P+ +     +G
Sbjct: 265 LKTIGPVVQIAAGPSYVLAVTQDGSVYSFG-SGSNF-CLGHGEQQDELQPRVIQAFKRKG 322

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           IH+  VS G  H   + S G+++T+G G  G LGHGD     TP+ + +L     V+   
Sbjct: 323 IHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCA 382

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK---EARLVPTCVAALVEP 456
               T  +VE             G L+ +G    G LG  D+   +  L P  +  L   
Sbjct: 383 RKRKTFVLVE------------GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPH 430

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRV 501
              QVS G   T+ +T  G ++  G     QLG     G L PT +
Sbjct: 431 RVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 131/278 (47%), Gaps = 27/278 (9%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS---LWLPKKLNGPLEGIHVSSVS 346
           +A G++HT  +  S  +Y+ G S    G+L HG+E +    + P +   P +   V+ VS
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLS--GVLAHGSETTQCVAFTPIEFPFPAQ---VAQVS 169

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTA 405
               H+A V  +GQ+ T GD +    GH D    +  P+ V++LKG    + A G+  T 
Sbjct: 170 ATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTV 229

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSC 463
            +               G  +T G    G+LGHGD   R VP  V  L  + P   Q++ 
Sbjct: 230 FLSR------------EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGP-VVQIAA 276

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN--FVEEIACGDYHVA 521
           G S  +A+T  G VY+ GS     LG  +   +L  RV     +    +  ++ GD H  
Sbjct: 277 GPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAV 336

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD 559
            L S   VYTWGKG  G LGHGD +D+  P ++  L +
Sbjct: 337 ALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNN 374



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 111/239 (46%), Gaps = 21/239 (8%)

Query: 216 GVKMDSFVPKAVESAVVLD-VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
           G  +D  VPK VE    +  V  IA G  +   VT+ G V+S+G      LGHG   D  
Sbjct: 251 GDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDEL 310

Query: 275 HPKLIDALKN--INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
            P++I A K   I++  V+ G+ H  A+  +G +YTWG   C  G LGHG+E     P+ 
Sbjct: 311 QPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYC--GALGHGDENDKITPQV 368

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---ISVSTPREVDSL 389
           L   L       V      T V+   G L+ FG   FG LG  DR     V  PR ++ L
Sbjct: 369 LVN-LNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECL 427

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
           K  R  + + G++HT  V +             G++F +GD +R +LGH      L PT
Sbjct: 428 KPHRVSQVSTGLYHTIVVTQ------------RGRIFGFGDNERAQLGHDSLRGCLEPT 474



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 143/343 (41%), Gaps = 25/343 (7%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAV 300
           G++  L+    +V+S G  L G L HG ++        I+      V  V+  ++H+  V
Sbjct: 119 GKYHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFV 178

Query: 301 TLSGDMYTWG--GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
             SG + T G   S+C     GH +        KL   L+G     V+ G   T  ++  
Sbjct: 179 LQSGQVLTCGDNSSHC----CGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSRE 234

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL-RTVRAACGVWHTAAVVEVMVGSSSS 417
           G  +T G  T G LGHGD +    P+ V+ LK +   V+ A G  +  AV +        
Sbjct: 235 GHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQ-------- 286

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP--NFCQVSCGHSLTVALTTTG 475
                G ++++G G    LGHG+++  L P  + A      +  +VS G    VAL + G
Sbjct: 287 ----DGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNG 342

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VYT G    G LG    N K+  +V   L      ++        VL     +Y +G  
Sbjct: 343 RVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWM 402

Query: 536 ANGRLGHGD---TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G LG  D   +D    P ++E LK  +V  +  G   T  +
Sbjct: 403 GFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVV 445



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 104/223 (46%), Gaps = 20/223 (8%)

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS---VSTPREVDSLKGLRTVRAACGV 401
           ++ G +HT ++ ++ ++++ G    GVL HG   +     TP E      +  V A    
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQN- 173

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQ 460
            H+A V++            SG++ T GD      GH D    +  P  V AL      Q
Sbjct: 174 -HSAFVLQ------------SGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQ 220

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYH 519
           V+ G   TV L+  GH YT GS  +GQLG      + +P  VE   T   V +IA G  +
Sbjct: 221 VAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSY 280

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQV 562
           V  +T    VY++G G+N  LGHG+  D   P +++A K K +
Sbjct: 281 VLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGI 323


>gi|237835893|ref|XP_002367244.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964908|gb|EEB00104.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506080|gb|EEE31715.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 725

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 221/550 (40%), Gaps = 169/550 (30%)

Query: 157 HLKG--LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGD----VFIWGECTGDGILGGGIHR 210
           HL+G  L+G   R+S  +  S S  GSG+    S  D    ++ WG C  DG LG G   
Sbjct: 144 HLRGFGLAGRGERLSHLAVASCSEPGSGNKAEGSSTDRSRILYSWG-CGIDGQLGLG--- 199

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLGH 267
                G  +    P+ V ++ + D + I   A G  H+   T  G VF+WG     RLGH
Sbjct: 200 -----GSALSVSTPQPVPASALHDGEFILQCAAGAFHSVCCTSLGRVFTWGRGGKNRLGH 254

Query: 268 G---------------VDSDVSH--------------PKLIDALKNIN--VELVACGEHH 296
                             S   H              PK ++ L  ++  V+ VACGE H
Sbjct: 255 DWPRETPASASPGGRPYRSSTKHLSASGIAETAVQTLPKCVEGLCRLSARVDAVACGEDH 314

Query: 297 TCAVTLSGDMYTWGGS---NCN-------------------------FGLL----GHGNE 324
           T  +T SG++Y+WGG+    C                          +G+L    G G+ 
Sbjct: 315 TLVLTDSGEVYSWGGNAHGECGRVETSESAEAVQAGDPARTKRRSWLWGVLRGDKGEGDI 374

Query: 325 MSL--------------WLPKK------LNGPLEGI----HVSSVSCGPWHTAVVTSAGQ 360
            +L              W  +       + G +EG      V+ ++CG   +A VT  G+
Sbjct: 375 DALATEEASSAHDANSPWAGRTEKEKGLVGGRVEGALRGKRVTQIACGKHVSAAVTEEGE 434

Query: 361 LFTFGDGTFGVLG-----------------------HGDRISVSTPREVDSLKGL----- 392
           L+ +G+G  G +G                        G   +V TPR ++ + GL     
Sbjct: 435 LYVWGEGRGGQVGPPVPAGRRSEDRRKEVSTSTFPSSGLSFNVPTPRRLE-VYGLAESEE 493

Query: 393 --------RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR 444
                   + V+ ACG  H AA+ E             G+++TWG  D G+LG G KE+R
Sbjct: 494 TSQDRTPKKVVQVACGSSHCAALTE------------DGEIYTWGSDDYGQLGLG-KESR 540

Query: 445 --LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVE 502
             L+P  V AL +     V CGH  T   T+TG V+  G    G+ G+ +++  LP  + 
Sbjct: 541 FVLLPRRVDALADKRVVSVRCGHFFTCCTTSTGEVFVWGYGRDGECGNGRSDAALPVLIS 600

Query: 503 -------GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-----RNF 550
                   K     V +   G  H+A  T    ++ WG+G  G+LG GD  +     R+ 
Sbjct: 601 LEAQPGGKKHASGTVLDTVAGGGHLAARTQEGGLWMWGRGREGQLGRGDAIESVAASRDS 660

Query: 551 PSLVEALKDK 560
           P LVE L ++
Sbjct: 661 PQLVEELWNR 670


>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 722

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 160/330 (48%), Gaps = 41/330 (12%)

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGL-LGHGNE-----MS 326
           V  P LI  + NI V++V CG +H+ A+  + ++Y WG   CN G  LG  +E       
Sbjct: 18  VQTPHLISDISNI-VKIV-CGANHSYAIDTNFEVYAWG---CNLGRKLGLSDEYYNQIFQ 72

Query: 327 LWLPKKLNGP-----LEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRISV 380
             +P+++  P     L    ++++S G  H+ A  T   Q++ +G G +G LG+ +   +
Sbjct: 73  ADIPEQIKIPVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDL 132

Query: 381 STPREVDSLKGLRTVR-----AACGVWHTAAVV-EVMVGSSSSSNCSSGKLFTWGDG--- 431
             P   + LK    ++      +CG  HT AV+ ++ V +S S N    KL+ WG     
Sbjct: 133 QYPEIFNGLKQPEGIQWEISEISCGENHTVAVIKQINVNNSQSQN----KLYVWGSSSDW 188

Query: 432 ----DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
               D G+  + ++   + P      VE     V      T+A+   G +++ G   + +
Sbjct: 189 QLGIDTGKTDYVNQPLEMSPDYWEGNVES----VKACSDFTIAIDKQGRIFSWGKGGFNR 244

Query: 488 LGDPK--ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           LG      N K P ++E  L+K  + + + G +H A +T+   +YTWG+ +NG+LGHG  
Sbjct: 245 LGYKAEIVNQKHPLQIES-LSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQA 303

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               FP  V+AL++  + S+ CG   T A+
Sbjct: 304 KADIFPKEVQALQNTYIVSVACGEGHTLAL 333



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 178/405 (43%), Gaps = 58/405 (14%)

Query: 210 RSGSYAGVKMDSFVPKAVESAVVLDVQNIA---CGGRHAALVTKQGEVFSWGEELGGRLG 266
           +S  Y   ++ S V K     ++ D+ NI    CG  H+  +    EV++WG  LG +LG
Sbjct: 3   QSKQYVNNQVKS-VNKVQTPHLISDISNIVKIVCGANHSYAIDTNFEVYAWGCNLGRKLG 61

Query: 267 -----------HGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWGGSNC 314
                        +   +  P  +  L N  +  ++ G +H+ A  T    +Y WG    
Sbjct: 62  LSDEYYNQIFQADIPEQIKIPVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIG-- 119

Query: 315 NFGLLGHGNEMSLWLPKKLNG--PLEGIH--VSSVSCGPWHTAVVT---------SAGQL 361
            +G LG+     L  P+  NG    EGI   +S +SCG  HT  V          S  +L
Sbjct: 120 EYGKLGNKESKDLQYPEIFNGLKQPEGIQWEISEISCGENHTVAVIKQINVNNSQSQNKL 179

Query: 362 FTFGDGTFGVLG--HGDRISVSTPREV--DSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
           + +G  +   LG   G    V+ P E+  D  +G      AC  + T A+ +        
Sbjct: 180 YVWGSSSDWQLGIDTGKTDYVNQPLEMSPDYWEGNVESVKACSDF-TIAIDK-------- 230

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLV----PTCVAALVEPNFCQVSCGHSLTVALTT 473
                G++F+WG G   RLG+   +A +V    P  + +L +    Q S G   + A+T 
Sbjct: 231 ----QGRIFSWGKGGFNRLGY---KAEIVNQKHPLQIESLSKQQIIQFSLGSFHSAAITN 283

Query: 474 TGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            G +YT G    GQLG  +A   + P  V+  L   ++  +ACG+ H   L+   E+++W
Sbjct: 284 NGRLYTWGRDSNGQLGHGQAKADIFPKEVQA-LQNTYIVSVACGEGHTLALSKNNELFSW 342

Query: 533 GKGANGRLGHGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAIC 576
           G  ++G+LG    + ++  P  +   +DK +K I CG+  +  + 
Sbjct: 343 GLNSSGQLGRASENLKSSDPKKISFFEDKSIKQIACGSKHSLVLL 387



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 13/188 (6%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           D  G +F WG+        GG +R G Y    ++   P  +ES     +   + G  H+A
Sbjct: 229 DKQGRIFSWGK--------GGFNRLG-YKAEIVNQKHPLQIESLSKQQIIQFSLGSFHSA 279

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
            +T  G +++WG +  G+LGHG       PK + AL+N  +  VACGE HT A++ + ++
Sbjct: 280 AITNNGRLYTWGRDSNGQLGHGQAKADIFPKEVQALQNTYIVSVACGEGHTLALSKNNEL 339

Query: 307 YTWGGSNCNFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           ++WG ++   G LG  +E +    PKK+    E   +  ++CG  H+ V+   G ++++G
Sbjct: 340 FSWGLNSS--GQLGRASENLKSSDPKKI-SFFEDKSIKQIACGSKHSLVLLQDGTVYSWG 396

Query: 366 DGTFGVLG 373
              +G LG
Sbjct: 397 SNQYGQLG 404



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 15/130 (11%)

Query: 151 SDGRTGHLKGLSGDTF----RVSLSSAVSSSSQGSGHDDGDSLG-DVFIWGECTGDGILG 205
           S+G+ GH +    D F    +   ++ + S + G GH    S   ++F WG     G LG
Sbjct: 294 SNGQLGHGQA-KADIFPKEVQALQNTYIVSVACGEGHTLALSKNNELFSWG-LNSSGQLG 351

Query: 206 GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 265
                    A   + S  PK +       ++ IACG +H+ ++ + G V+SWG    G+L
Sbjct: 352 R--------ASENLKSSDPKKISFFEDKSIKQIACGSKHSLVLLQDGTVYSWGSNQYGQL 403

Query: 266 GHGVDSDVSH 275
           G   DS+  +
Sbjct: 404 GFDQDSNAQN 413


>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
            Shintoku]
          Length = 2619

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 187/451 (41%), Gaps = 74/451 (16%)

Query: 168  VSLSSAVSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKA 226
            + L +A+ S + G+ H    ++ G V+ WG     G+LG G   +  Y  VK+       
Sbjct: 1123 IGLRNAIVSIACGANHTLVTTVDGCVYSWG-MGAYGVLGTG-SVANRYNPVKV------- 1173

Query: 227  VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
            V  +  + +     G RH+  + K+G V+SWG    GRLG G   +   P LI       
Sbjct: 1174 VFPSDNIFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYE 1233

Query: 287  VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
            V  ++CG+ H+  +   G +YTWG   C  G LG G  +S  L   +   L+G H+  ++
Sbjct: 1234 VFQISCGDSHSACLDRFGTVYTWGC--CRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIA 1291

Query: 347  CGPWHTAVVTSAGQLFT------FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            CG  +T  ++++G+++       F   + G++ + D +    P       G + V  A G
Sbjct: 1292 CGTGNTLALSASGKIYQWGCTLGFNKQSEGLISNIDYVPQPVPD-----TGFKNVFIAAG 1346

Query: 401  VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV------ 454
             +  AA+               G L TWG G   RLGHGD +  + P  V+ L       
Sbjct: 1347 PYSCAAI------------NIFGDLLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIYID 1394

Query: 455  --------------------------EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
                                      E    Q++ G    V LT  G VYT G  V    
Sbjct: 1395 TLLKVYDETPMELQDNVKAGATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWG--VNNGT 1452

Query: 489  GDPKANGKLPTRVEGKLTKNF---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
            G      ++ +  E  L  +F   + +IACG  H   +T    ++TWG   NG+LG GD 
Sbjct: 1453 GYNSTKDQIESYSEPMLFNHFSSKISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDL 1512

Query: 546  DDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
              R  P  V  +++    ++  G   +  IC
Sbjct: 1513 RSRVIPDHVPYIEN--CINVFAGVDNSGCIC 1541



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 177/407 (43%), Gaps = 67/407 (16%)

Query: 191  DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV-- 248
            +V+ WG+   +  LG G+  S S          PK +       +  +ACG  H+A++  
Sbjct: 1014 NVYSWGKVPFN-CLGQGVDVSTSE--------YPKIIPFFSGRKIAQVACGDYHSAVLVS 1064

Query: 249  -TKQ----GEVFSWGEELGGRLGHGVDS------------DVSHPK----------LIDA 281
             +KQ    G VF++G    GRLG+ +D+            D   P           L   
Sbjct: 1065 SSKQHPNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIG 1124

Query: 282  LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            L+N  V  +ACG +HT   T+ G +Y+WG     +G+LG G+  + + P K+  P + I 
Sbjct: 1125 LRNAIVS-IACGANHTLVTTVDGCVYSWGMGA--YGVLGTGSVANRYNPVKVVFPSDNIF 1181

Query: 342  VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
            +S    G  H+  +   G ++++G G  G LG G   +  TP  +         + +CG 
Sbjct: 1182 ISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGD 1241

Query: 402  WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQ 460
             H+A +               G ++TWG    G+LG G   + ++ P  V +L   +  Q
Sbjct: 1242 SHSACLDRF------------GTVYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQ 1289

Query: 461  VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-------PTRVEGKLTKNFVEEI 513
            ++CG   T+AL+ +G +Y  G      LG  K +  L       P  V     KN    I
Sbjct: 1290 IACGTGNTLALSASGKIYQWGC----TLGFNKQSEGLISNIDYVPQPVPDTGFKNVF--I 1343

Query: 514  ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDK 560
            A G Y  A +    ++ TWG G   RLGHGD+ D   P  V  L+ +
Sbjct: 1344 AAGPYSCAAINIFGDLLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTR 1390



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 214/534 (40%), Gaps = 106/534 (19%)

Query: 129  PPKVLLPSE----SAC--GSVNSLSSG----------GSDGRTG---HLKGLSGDTFRVS 169
            P KV+ PS+    S C  GS +S++            G +GR G        + +  R+ 
Sbjct: 1170 PVKVVFPSDNIFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIF 1229

Query: 170  LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
             +  V   S G  H    D  G V+ WG C G G LG G         +  D   P  VE
Sbjct: 1230 DTYEVFQISCGDSHSACLDRFGTVYTWGCCRG-GKLGLG--------KIVSDVLEPAVVE 1280

Query: 229  SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG-GRLGHGVDSDVSH---PKLIDALKN 284
            S     +  IACG  +   ++  G+++ WG  LG  +   G+ S++ +   P      KN
Sbjct: 1281 SLKGTHIIQIACGTGNTLALSASGKIYQWGCTLGFNKQSEGLISNIDYVPQPVPDTGFKN 1340

Query: 285  INVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
            +    +A G +   A+ + GD+ TWG G+      LGHG+      PK ++     I++ 
Sbjct: 1341 V---FIAAGPYSCAAINIFGDLLTWGLGTGYR---LGHGDSKDHVAPKFVSHLRTRIYID 1394

Query: 344  S-------------------------------VSCGPWHTAVVTSAGQLFTFG--DGTFG 370
            +                               ++ G  H  ++T  G ++T+G  +GT G
Sbjct: 1395 TLLKVYDETPMELQDNVKAGATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWGVNNGT-G 1453

Query: 371  VLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
                 D+I S S P   +     +  + ACG  H+ A+              +G LFTWG
Sbjct: 1454 YNSTKDQIESYSEPMLFNHFSS-KISKIACGSNHSLAIT------------VNGLLFTWG 1500

Query: 430  DGDRGRLGHGDKEARLVP-------TCVAAL--VEPNFCQVSCGHSLTVALTTTGHVYTM 480
              D G+LG GD  +R++P        C+     V+ + C  S  H         G ++  
Sbjct: 1501 CNDNGQLGQGDLRSRVIPDHVPYIENCINVFAGVDNSGCICSSNHE-DFMKDDYGTLWVF 1559

Query: 481  GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
            GS   G+LG  +A            T   V ++A G  H  VLT    +Y+ G G  GRL
Sbjct: 1560 GSSSCGKLGLGEALTSTVMTPREITTVTGVYKLALGTMHSVVLTHEGSLYSAGAGTGGRL 1619

Query: 541  GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCS 590
            G GDT   N+        + +   +  G+S + AI     L+ W  G  + +CS
Sbjct: 1620 GTGDTS--NYFVFTPVKTEVKFVDVCAGSSHSLAISVDNELYGWGEG--KYICS 1669



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 136/327 (41%), Gaps = 58/327 (17%)

Query: 305  DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS------- 357
            ++Y+WG     F  LG G ++S     K+     G  ++ V+CG +H+AV+ S       
Sbjct: 1014 NVYSWG--KVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPN 1071

Query: 358  AGQLFTFGDGTFGVLGH-----GDRIS--------------VSTPREVDSLKGLR--TVR 396
            AG +FTFG G  G LG+      D +S                TP+ V    GLR   V 
Sbjct: 1072 AGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVS 1131

Query: 397  AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
             ACG  HT                  G +++WG G  G LG G    R  P  V    + 
Sbjct: 1132 IACGANHTLVTT------------VDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDN 1179

Query: 457  NFCQVSC-GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 515
             F    C G   ++AL   G+V++ G    G+LG           +        V +I+C
Sbjct: 1180 IFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISC 1239

Query: 516  GDYHVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            GD H A L     VYTWG    G+LG G    D   P++VE+LK   +  I CGT  T A
Sbjct: 1240 GDSHSACLDRFGTVYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLA 1299

Query: 575  IC----LHKWVSGVDQSMCSGCRIPFN 597
            +     +++W          GC + FN
Sbjct: 1300 LSASGKIYQW----------GCTLGFN 1316



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 168/387 (43%), Gaps = 69/387 (17%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVK--MDSFVPKAVESAVVLDVQNIACGGRHAAL 247
            G V+ WG   G G           Y   K  ++S+    + +     +  IACG  H+  
Sbjct: 1441 GTVYTWGVNNGTG-----------YNSTKDQIESYSEPMLFNHFSSKISKIACGSNHSLA 1489

Query: 248  VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-INVE-------LVACGEHHTCA 299
            +T  G +F+WG    G+LG G       P  +  ++N INV         +    H    
Sbjct: 1490 ITVNGLLFTWGCNDNGQLGQGDLRSRVIPDHVPYIENCINVFAGVDNSGCICSSNHEDFM 1549

Query: 300  VTLSGDMYTWGGSNCNFGLLGHGNEM--SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
                G ++ +G S+C  G LG G  +  ++  P+++   + G++   ++ G  H+ V+T 
Sbjct: 1550 KDDYGTLWVFGSSSC--GKLGLGEALTSTVMTPREIT-TVTGVY--KLALGTMHSVVLTH 1604

Query: 358  AGQLFTFGDGTFGVLGHGD--RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
             G L++ G GT G LG GD     V TP + +                    V+V  GSS
Sbjct: 1605 EGSLYSAGAGTGGRLGTGDTSNYFVFTPVKTE-----------------VKFVDVCAGSS 1647

Query: 416  SSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN-----FCQVSCG-HSLT 468
             S   S   +L+ WG+   G+    D++  L PT +  +  P         V+ G HSL 
Sbjct: 1648 HSLAISVDNELYGWGE---GKYICSDEKHVLEPTLMEVIPSPTGEAKVISAVAAGNHSL- 1703

Query: 469  VALTTTGHVYTMGSPVYGQLG-----DPKANG--KLPTRVEGKLTKNFVEEIACGDYHVA 521
              LT +G+V   G+  YGQLG        AN   K+P+ V   L  N V  IA   Y  +
Sbjct: 1704 -VLTNSGYVAAFGNNTYGQLGVQLSIKSSANNFIKMPSTV--NLDAN-VTCIATSRYFSS 1759

Query: 522  VLTSRTEVYTWGKGANGRLGHGDTDDR 548
              T + + Y+WG  ++ RLG G T+++
Sbjct: 1760 CSTLKGDAYSWGLSSDDRLGVGFTNNK 1786



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 34/279 (12%)

Query: 181  SGHDD--GDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNI 238
            S H+D   D  G ++++G  +  G LG          G  + S V    E   V  V  +
Sbjct: 1543 SNHEDFMKDDYGTLWVFGSSSC-GKLG---------LGEALTSTVMTPREITTVTGVYKL 1592

Query: 239  ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-INVELVACGEHHT 297
            A G  H+ ++T +G ++S G   GGRLG G   D S+  +   +K  +    V  G  H+
Sbjct: 1593 ALGTMHSVVLTHEGSLYSAGAGTGGRLGTG---DTSNYFVFTPVKTEVKFVDVCAGSSHS 1649

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL-EGIHVSSVSCGPWHTAVVT 356
             A+++  ++Y WG          H  E +L   + +  P  E   +S+V+ G  H+ V+T
Sbjct: 1650 LAISVDNELYGWGEGKYICSDEKHVLEPTLM--EVIPSPTGEAKVISAVAAGN-HSLVLT 1706

Query: 357  SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            ++G +  FG+ T+G LG    I  S     + +K   TV       +  A V  +  S  
Sbjct: 1707 NSGYVAAFGNNTYGQLGVQLSIKSSAN---NFIKMPSTV-------NLDANVTCIATSRY 1756

Query: 417  SSNCSS--GKLFTWGDGDRGRLGHGDKEARLV--PTCVA 451
             S+CS+  G  ++WG     RLG G    ++V  PT + 
Sbjct: 1757 FSSCSTLKGDAYSWGLSSDDRLGVGFTNNKVVYAPTTIV 1795


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 175/405 (43%), Gaps = 53/405 (13%)

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGV 269
           +G Y  V M    P+ V     L V  ++ GG+H+ LVT+ G+++  G  L  +LG  G+
Sbjct: 99  TGHYNEVLM----PERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNLHDKLGLEGI 154

Query: 270 DSDVSHP-KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN-FGLLGHGNEMSL 327
            +      K ++ L  I ++ VACG++HT A++  G +Y WGGS  N  G      + + 
Sbjct: 155 TTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRGDRSQERKDNA 214

Query: 328 WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 387
                L     G  +  + CG +H+  +   G L+++G G  G  GHG      TP+ + 
Sbjct: 215 KYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGKFEDQETPQRIK 274

Query: 388 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
              G    +   G  HT A+             +  +++ WGDG  G+ G G+ E   +P
Sbjct: 275 FFDGKIITQIEAGNHHTLAIT------------ADNQVYAWGDGRYGQCGFGEFENTAIP 322

Query: 448 TCV-----------------AALVE-----PNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
             V                   ++E     P   Q++ G   T+ LT++G +++ G    
Sbjct: 323 QLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQQ 382

Query: 486 GQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           GQLG    +    P  VEG L    V ++A G  H   LT++ +VY  G    G+ G  D
Sbjct: 383 GQLGHNTVDNYCRPKLVEGMLNHKTV-QVAAGRNHSLCLTNKNDVYACGNNQYGQCGLPD 441

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFT-AAICLHKWVSGVDQSM 588
            + R   S         V S++   SF   A   H WV  +D+ M
Sbjct: 442 REMRKTFS--------HVLSLLSVNSFKLYAGGFHSWVV-LDEMM 477



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 161/358 (44%), Gaps = 57/358 (15%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V+S+G+   G LG G  ++V  P+ +  L  + V  ++ G  H+  VT  G ++  G SN
Sbjct: 86  VWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCG-SN 144

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLE---GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
            +  L   G E      KK   P+E    I +  V+CG +HT  ++  GQ++ +G    G
Sbjct: 145 LHDKL---GLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWG----G 197

Query: 371 VLGHGDRISVSTPRE---------VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
            L H  R   S  R+         + S  G +  +  CG +H+ A+ +            
Sbjct: 198 SL-HNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDD------------ 244

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           +G L++WG G++G  GHG  E +  P  +         Q+  G+  T+A+T    VY  G
Sbjct: 245 NGTLYSWGVGEKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWG 304

Query: 482 SPVYGQLGDPK-ANGKLPT----------------RVEGKLTKNF-----VEEIACGDYH 519
              YGQ G  +  N  +P                  V+ ++ + F     +++IA G+ H
Sbjct: 305 DGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMH 364

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
             VLTS  +++++G    G+LGH   D+   P LVE + + +   +  G +   ++CL
Sbjct: 365 TLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRN--HSLCL 420



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 144/328 (43%), Gaps = 49/328 (14%)

Query: 196 GECTGDGIL---GGGIHRSGSYAGVKMDS---FVPKAVESAVVLDVQNIACGGRHAALVT 249
           G  T DG L   G  +H      G+   S   F P  VE    + ++ +ACG  H   ++
Sbjct: 130 GLVTEDGKLWMCGSNLHDKLGLEGITTGSKKTFKP--VELLTQIFIKQVACGDYHTLALS 187

Query: 250 KQGEVFSWGEEL----GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
           K+G+V+ WG  L    G R     D+    P L+ +     ++ + CG+ H+ A+  +G 
Sbjct: 188 KEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGT 247

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y+WG      G  GHG       P+++    +G  ++ +  G  HT  +T+  Q++ +G
Sbjct: 248 LYSWGVGEK--GECGHGKFEDQETPQRIK-FFDGKIITQIEAGNHHTLAITADNQVYAWG 304

Query: 366 DGTFGVLGHGDRISVSTPREV-------------DSLKGL---------RTVRAACGVWH 403
           DG +G  G G+  + + P+ V             DS++           +  + A G  H
Sbjct: 305 DGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMH 364

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           T  +             SSG++F++G   +G+LGH   +    P  V  ++     QV+ 
Sbjct: 365 TLVLT------------SSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAA 412

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDP 491
           G + ++ LT    VY  G+  YGQ G P
Sbjct: 413 GRNHSLCLTNKNDVYACGNNQYGQCGLP 440



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 131/306 (42%), Gaps = 49/306 (16%)

Query: 190 GDVFIWGECTGDGILGGGIH-RSGSYAGVKMDS--FVPKAVESAVVLDVQNIACGGRHAA 246
           G V++WG         G +H + G  +  + D+  + P  ++S     ++ I CG  H+ 
Sbjct: 190 GQVYVWG---------GSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSL 240

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
            +   G ++SWG    G  GHG   D   P+ I       +  +  G HHT A+T    +
Sbjct: 241 ALDDNGTLYSWGVGEKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQV 300

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---------------------SV 345
           Y WG  +  +G  G G   +  +P+ +N P +G + S                      +
Sbjct: 301 YAWG--DGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQI 358

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 405
           + G  HT V+TS+GQ+F+FG    G LGH    +   P+ V+ +   +TV+ A G  H+ 
Sbjct: 359 AAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSL 418

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG- 464
            +             +   ++  G+   G+ G  D+E R   + V +L+  N  ++  G 
Sbjct: 419 CLT------------NKNDVYACGNNQYGQCGLPDREMRKTFSHVLSLLSVNSFKLYAGG 466

Query: 465 -HSLTV 469
            HS  V
Sbjct: 467 FHSWVV 472


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 117/214 (54%), Gaps = 15/214 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACG 293
           +  I CG  H+  ++K GE+F+WG+ L G+LG G      + P++++ L  I +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAG 199

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           E H+ A+++SG++Y+WG +   FG LG  +  S   P  +   L+   V  ++CG  HTA
Sbjct: 200 EAHSMALSMSGNIYSWGKN--EFGQLGLDHTESKDSPSLIEA-LDNQKVEFLACGGSHTA 256

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++T  G LFTFG G  G LGH    +   P  V  L G R  + ACG WHT A V  +  
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDL-- 314

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                    GK+F++G G  G+LG+G    +L+P
Sbjct: 315 ---------GKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 28/278 (10%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK I   KN+ +  +  G  H   ++  G  + +   +     + H    S+   KK   
Sbjct: 88  PKCIKLGKNMKIHSMDLGADHMLILSSGGKPFEYDNYS-----MKHLRFESILQEKK--- 139

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRT 394
                 +  ++CG +H+  ++  G+LF +G    G LG G +  S +TP+ V+ L G+  
Sbjct: 140 ------IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPL 193

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
            + + G  H+ A+              SG +++WG  + G+LG    E++  P+ + AL 
Sbjct: 194 AQISAGEAHSMAL------------SMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALD 241

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA 514
                 ++CG S T  LT  G ++T G+  +GQLG      +L   +  +L  N V +IA
Sbjct: 242 NQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIA 301

Query: 515 CGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
           CG +H +A ++   +V+++G G  G+LG+G T D+  P
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 127/268 (47%), Gaps = 26/268 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           PK ++    + + ++  G  H  +++  G+ F +            +  + H +    L+
Sbjct: 88  PKCIKLGKNMKIHSMDLGADHMLILSSGGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
              +  + CG++H+ A++  G+++ W G N + G LG G +       ++   L GI ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAW-GQNLH-GQLGVGRKFPSTTTPQIVEHLSGIPLA 194

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            +S G  H+  ++ +G ++++G   FG LG     S  +P  +++L   +    ACG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSH 254

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           TA + +             G LFT+G G  G+LGH   +  L P  VA L      Q++C
Sbjct: 255 TALLTQ------------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIAC 302

Query: 464 GHSLTVA-LTTTGHVYTMGSPVYGQLGD 490
           G   T+A ++  G V++ GS   GQLG+
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKEGQLGN 330



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 26/239 (10%)

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           + + + S+  G  H  +++S G+ F +           D  S+   R    L+  + ++ 
Sbjct: 95  KNMKIHSMDLGADHMLILSSGGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEP 456
            CG +H+ A+               G+LF WG    G+LG G K  +   P  V  L   
Sbjct: 144 TCGDYHSLAL------------SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGI 191

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIAC 515
              Q+S G + ++AL+ +G++Y+ G   +GQLG D   +   P+ +E  L    VE +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEA-LDNQKVEFLAC 250

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G  H A+LT    ++T+G G +G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 251 GGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLA 309



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 17/208 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+    G LG G     +          P+ VE    + +  I+ G  H+  ++
Sbjct: 157 GELFAWGQ-NLHGQLGVGRKFPSTTT--------PQIVEHLSGIPLAQISAGEAHSMALS 207

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G ++SWG+   G+LG         P LI+AL N  VE +ACG  HT  +T  G ++T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTF 267

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G      G LGH +  +   P  L   L G  V+ ++CG WHT A V+  G++F+FG G 
Sbjct: 268 GAG--KHGQLGHNSTQNELRP-CLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 369 FGVLGHG---DRISVSTPREVDSLKGLR 393
            G LG+G   D++ +  P +V S + L+
Sbjct: 325 EGQLGNGGTRDQL-IPLPMKVSSNEDLK 351



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 7/129 (5%)

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF- 509
           + L E    Q++CG   ++AL+  G ++  G  ++GQLG      K P+    ++ ++  
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLS 189

Query: 510 ---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
              + +I+ G+ H   L+    +Y+WGK   G+LG   T+ ++ PSL+EAL +++V+ + 
Sbjct: 190 GIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLA 249

Query: 567 CGTSFTAAI 575
           CG S TA +
Sbjct: 250 CGGSHTALL 258


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 117/214 (54%), Gaps = 15/214 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACG 293
           +  I CG  H+  ++K GE+F+WG+ L G+LG G      + P++++ L  I +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAG 199

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           E H+ A+++SG++Y+WG +   FG LG  +  S   P  +   L+   V  ++CG  HTA
Sbjct: 200 EAHSMALSMSGNIYSWGKN--EFGQLGLDHTESKDSPSLIEA-LDNQKVEFLACGGSHTA 256

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++T  G LFTFG G  G LGH    +   P  V  L G R  + ACG WHT A V  +  
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDL-- 314

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                    GK+F++G G  G+LG+G    +L+P
Sbjct: 315 ---------GKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 133/278 (47%), Gaps = 28/278 (10%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           PK I   KN+ +  +  G  H   ++  G  + +   +     + H    S+   KK   
Sbjct: 88  PKCIKLGKNMKIHSMDLGADHMLILSSDGKPFEYDNYS-----MKHLRFESILQEKK--- 139

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRT 394
                 +  ++CG +H+  ++  G+LF +G    G LG G +  S + P+ V+ L G+  
Sbjct: 140 ------IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPL 193

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
            + + G  H+ A+              SG +++WG  + G+LG    E++  P+ + AL 
Sbjct: 194 AQISAGEAHSMAL------------SMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALD 241

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA 514
                 ++CG S T  LT  G ++T G+  +GQLG      +L   +  +L  N V +IA
Sbjct: 242 NQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIA 301

Query: 515 CGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
           CG +H +A ++   +V+++G G  G+LG+G T D+  P
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 127/268 (47%), Gaps = 26/268 (9%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           PK ++    + + ++  G  H  +++  G+ F +            +  + H +    L+
Sbjct: 88  PKCIKLGKNMKIHSMDLGADHMLILSSDGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
              +  + CG++H+ A++  G+++ W G N + G LG G +       ++   L GI ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAW-GQNLH-GQLGVGRKFPSTTAPQIVEHLAGIPLA 194

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            +S G  H+  ++ +G ++++G   FG LG     S  +P  +++L   +    ACG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSH 254

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           TA + +             G LFT+G G  G+LGH   +  L P  VA L      Q++C
Sbjct: 255 TALLTQ------------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIAC 302

Query: 464 GHSLTVA-LTTTGHVYTMGSPVYGQLGD 490
           G   T+A ++  G V++ GS   GQLG+
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKEGQLGN 330



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 26/239 (10%)

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 397
           + + + S+  G  H  +++S G+ F +           D  S+   R    L+  + ++ 
Sbjct: 95  KNMKIHSMDLGADHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEP 456
            CG +H+ A+               G+LF WG    G+LG G K  +   P  V  L   
Sbjct: 144 TCGDYHSLAL------------SKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGI 191

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIAC 515
              Q+S G + ++AL+ +G++Y+ G   +GQLG D   +   P+ +E  L    VE +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEA-LDNQKVEFLAC 250

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G  H A+LT    ++T+G G +G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 251 GGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLA 309



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 106/208 (50%), Gaps = 17/208 (8%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+    G LG G     + A        P+ VE    + +  I+ G  H+  ++
Sbjct: 157 GELFAWGQ-NLHGQLGVGRKFPSTTA--------PQIVEHLAGIPLAQISAGEAHSMALS 207

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G ++SWG+   G+LG         P LI+AL N  VE +ACG  HT  +T  G ++T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTF 267

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G      G LGH +  +   P  L   L G  V+ ++CG WHT A V+  G++F+FG G 
Sbjct: 268 GAG--KHGQLGHNSTQNELRP-CLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 369 FGVLGHG---DRISVSTPREVDSLKGLR 393
            G LG+G   D++ +  P +V S + L+
Sbjct: 325 EGQLGNGGTRDQL-IPLPMKVSSNEDLK 351



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 7/129 (5%)

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF- 509
           + L E    Q++CG   ++AL+  G ++  G  ++GQLG      K P+    ++ ++  
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG---VGRKFPSTTAPQIVEHLA 189

Query: 510 ---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
              + +I+ G+ H   L+    +Y+WGK   G+LG   T+ ++ PSL+EAL +++V+ + 
Sbjct: 190 GIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLA 249

Query: 567 CGTSFTAAI 575
           CG S TA +
Sbjct: 250 CGGSHTALL 258


>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
 gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  127 bits (319), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 150/315 (47%), Gaps = 22/315 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACG 293
           V  ++    HAA V + GEVF+ G+      GH   +  +  P+L++ALK +  + VA G
Sbjct: 165 VIQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVG 224

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHT 352
            + T  +T  G +YT G +    G LGHG+      PK +   LEG+  V  ++ GP + 
Sbjct: 225 LNFTVFLTRQGQLYTCGTNT--HGQLGHGDTQDRPTPKIIE-LLEGVGSVVQIAAGPSYV 281

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL--KGLRTVRAACGVWHTAAVVEV 410
             VT  G +++FG G+   LGHG++     PR + +   K +  V  + G  H  A+   
Sbjct: 282 LAVTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALD-- 339

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                     SSG +++WG G  G LGHGD+  + +P  V  L      QV      T  
Sbjct: 340 ----------SSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQVCARKRKTFV 389

Query: 471 LTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           L   G VY  G   +G LG P    ++  +  RV   L    V +I+ G YH  V+T++ 
Sbjct: 390 LVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNQG 449

Query: 528 EVYTWGKGANGRLGH 542
           +++ +G     +LGH
Sbjct: 450 QMFGFGDNERAQLGH 464



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 133/274 (48%), Gaps = 21/274 (7%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP-KKLNGPLEGIHVSSVSCG 348
           V  G +HT  +  S  +Y+ G S C  G+LGHG E +  +   ++  P    +V  VS  
Sbjct: 116 VTTGRYHTLLIRDS-SVYSCGSSLC--GVLGHGAETTQCVAFTRIRFP-SLAYVIQVSAS 171

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
             H A V  +G++FT GD +    GH D    +  PR V++LKG+   + A G+  T  +
Sbjct: 172 HNHAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFL 231

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP-NFCQVSCGHS 466
                          G+L+T G    G+LGHGD + R  P  +  L    +  Q++ G S
Sbjct: 232 TR------------QGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPS 279

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNF-VEEIACGDYHVAVLT 524
             +A+T  G VY+ GS     LG  + + +  P  ++    K+  V  ++ GD H   L 
Sbjct: 280 YVLAVTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALD 339

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
           S   VY+WGKG  G LGHGD  D+  P+LV  LK
Sbjct: 340 SSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLK 373



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 138/287 (48%), Gaps = 22/287 (7%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P+ VE+   +  + +A G      +T+QG++++ G    G+LGHG   D   PK+I+ 
Sbjct: 205 FRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIEL 264

Query: 282 LKNI-NVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNG-PLE 338
           L+ + +V  +A G  +  AVT +G +Y++G GSN     LGHG +   + P+ +     +
Sbjct: 265 LEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNL---CLGHGEQHDEFRPRAIQTFRRK 321

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
            IHV  VS G  H   + S+G ++++G G  G LGHGD I  + P  V+ LK    V+  
Sbjct: 322 DIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQVC 381

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK---EARLVPTCVAALVE 455
                T  +V+             G ++ +G    G LG  D+   +  + P  + +L  
Sbjct: 382 ARKRKTFVLVD------------GGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRA 429

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRV 501
            +  Q+S G   TV +T  G ++  G     QLG     G L PT +
Sbjct: 430 RHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEI 476



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 147/347 (42%), Gaps = 33/347 (9%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDSD-------VSHPKLIDALKNINVELVACGE 294
           GR+  L+ +   V+S G  L G LGHG ++        +  P L   ++      V+   
Sbjct: 119 GRYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQ------VSASH 172

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
           +H   V  SG+++T G  N +F   GH +        +L   L+G+    V+ G   T  
Sbjct: 173 NHAAFVLQSGEVFTCG-DNSSF-CCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVF 230

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL-RTVRAACGVWHTAAVVEVMVG 413
           +T  GQL+T G  T G LGHGD     TP+ ++ L+G+   V+ A G  +  AV +    
Sbjct: 231 LTRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTD---- 286

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF--CQVSCGHSLTVAL 471
                   +G ++++G G    LGHG++     P  +      +     VS G    VAL
Sbjct: 287 --------NGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVAL 338

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
            ++G VY+ G    G LG      K    +   L  +   ++        VL     VY 
Sbjct: 339 DSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYG 398

Query: 532 WGKGANGRLGHGD---TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +G    G LG  D   +D    P ++++L+ + V  I  G   T  +
Sbjct: 399 FGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVV 445



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 110/239 (46%), Gaps = 21/239 (8%)

Query: 216 GVKMDSFVPKAVESAV-VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
           G   D   PK +E    V  V  IA G  +   VT  G V+S+G      LGHG   D  
Sbjct: 251 GDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNLCLGHGEQHDEF 310

Query: 275 HPKLIDAL--KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
            P+ I     K+I+V  V+ G+ H  A+  SG +Y+WG   C  G LGHG+E+   LP  
Sbjct: 311 RPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYC--GALGHGDEIDKTLPAL 368

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---ISVSTPREVDSL 389
           +N  L+      V      T V+   G ++ FG   FG LG  DR     V  PR +DSL
Sbjct: 369 VN-CLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSL 427

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
           +     + + G++HT  V             + G++F +GD +R +LGH      L PT
Sbjct: 428 RARHVSQISTGLYHTVVVT------------NQGQMFGFGDNERAQLGHDTLRGCLQPT 474



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 8/176 (4%)

Query: 216 GVKMDSFVPKAVESAVVLDVQ--NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
           G + D F P+A+++    D+   +++ G  HA  +   G V+SWG+   G LGHG + D 
Sbjct: 304 GEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDK 363

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG---HGNEMSLWLP 330
           + P L++ LK+     V   +  T  +   G +Y +G     FG LG    G    +  P
Sbjct: 364 TLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMG--FGSLGFPDRGLSDKVMRP 421

Query: 331 KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
           + L+  L   HVS +S G +HT VVT+ GQ+F FGD     LGH        P E+
Sbjct: 422 RVLD-SLRARHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEI 476



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 20/226 (8%)

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS---VSTPREVDSLKGLRTVRAACGV 401
           V+ G +HT ++  +  +++ G    GVLGHG   +     T     SL  +  V A+   
Sbjct: 116 VTTGRYHTLLIRDS-SVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHN- 173

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQ 460
            H A V++            SG++FT GD      GH D    +  P  V AL      Q
Sbjct: 174 -HAAFVLQ------------SGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQ 220

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYH 519
           V+ G + TV LT  G +YT G+  +GQLG      +  P  +E       V +IA G  +
Sbjct: 221 VAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSY 280

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
           V  +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 281 VLAVTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVV 326


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  127 bits (319), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 156/329 (47%), Gaps = 41/329 (12%)

Query: 264 RLGHGVD---------SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSN 313
           RLG  VD          +  +P+ I  L+ + V LV+CG+ H+ AV   G ++ WG GS 
Sbjct: 16  RLGFSVDFMPPSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSE 75

Query: 314 CNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
              G LG G    + + PKK+   L GI +  VSCG +H+  ++  GQ+F++G  + G L
Sbjct: 76  ---GQLGTGEVKGINFTPKKIKT-LTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQL 131

Query: 373 GHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           G G    S  +P+ V SL+G+   + A G  H+ A+              SG  F WG+ 
Sbjct: 132 GLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFAL------------SVSGTSFGWGNN 179

Query: 432 DRGRL---GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
             G+L   G+        P  + AL       +SCG+  T  LT  G V+T G    GQL
Sbjct: 180 SAGQLALSGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQL 239

Query: 489 G-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLG--HGD 544
           G  P A  + P  VE       V +I CG YH +A + +  +V ++G+G + R    H +
Sbjct: 240 GHSPSAQDRGPQLVER--IDGLVSQIDCGSYHTLAYVYTTGQVVSFGRGPSCRSSSTHPE 297

Query: 545 TDDRNF--PSLV--EALKDKQVKSIVCGT 569
               NF    L+  E L D QVK I  GT
Sbjct: 298 AQIENFDISCLLSAEDLVDVQVKHIFAGT 326



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 142/284 (50%), Gaps = 29/284 (10%)

Query: 164 DTFRVSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV 223
           +T RVSL S     S    H      G VF WG    +G LG G         VK  +F 
Sbjct: 44  ETLRVSLVSCGQEHSLAVCHR-----GRVFAWG-AGSEGQLGTG--------EVKGINFT 89

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDAL 282
           PK +++   + +  ++CG  H+  +++ G+VFSWG+   G+LG G +      P+ + +L
Sbjct: 90  PKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSL 149

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           + I +  VA G  H+ A+++SG  + WG ++     L G+   +  + P+ + G L  + 
Sbjct: 150 EGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSI-GALRNLG 208

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  +SCG  HTAV+T  G++FTFGD + G LGH        P+ V+ + GL + +  CG 
Sbjct: 209 VIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVS-QIDCGS 267

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
           +HT A V            ++G++ ++G G   R      EA++
Sbjct: 268 YHTLAYVY-----------TTGQVVSFGRGPSCRSSSTHPEAQI 300



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 141/268 (52%), Gaps = 30/268 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDAL 282
           P+ + +   L V  ++CG  H+  V  +G VF+WG    G+LG G    ++  PK I  L
Sbjct: 37  PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTL 96

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 341
             I +  V+CG++H+ A++  G +++WG ++   G LG G E  S   P+++   LEGI 
Sbjct: 97  TGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQ--GQLGLGKEFPSQDSPQRVRS-LEGIP 153

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVST--PREVDSLKGLRTVRAA 398
           ++ V+ G  H+  ++ +G  F +G+ + G L   G+ + V +  PR + +L+ L  +  +
Sbjct: 154 LAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYIS 213

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG----DKEARLVPTCVAALV 454
           CG  HTA + +            +GK+FT+GD   G+LGH     D+  +LV   +  LV
Sbjct: 214 CGYEHTAVLTQ------------NGKVFTFGDNSCGQLGHSPSAQDRGPQLVER-IDGLV 260

Query: 455 EPNFCQVSCGHSLTVA-LTTTGHVYTMG 481
                Q+ CG   T+A + TTG V + G
Sbjct: 261 S----QIDCGSYHTLAYVYTTGQVVSFG 284



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 127/243 (52%), Gaps = 18/243 (7%)

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-TPREVDSLKGLRTV 395
           LE + VS VSCG  H+  V   G++F +G G+ G LG G+   ++ TP+++ +L G++ +
Sbjct: 43  LETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKII 102

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALV 454
           + +CG +H+ A+ E             G++F+WG   +G+LG G +  ++  P  V +L 
Sbjct: 103 QVSCGDYHSLALSE------------GGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLE 150

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT---RVEGKLTKNFVE 511
                QV+ G + + AL+ +G  +  G+   GQL     N  + +   R  G L    V 
Sbjct: 151 GIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVI 210

Query: 512 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            I+CG  H AVLT   +V+T+G  + G+LGH  +     P LVE + D  V  I CG+  
Sbjct: 211 YISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERI-DGLVSQIDCGSYH 269

Query: 572 TAA 574
           T A
Sbjct: 270 TLA 272


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 172/363 (47%), Gaps = 32/363 (8%)

Query: 227 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
           V+ + + DV  IA G  H   +   G V++WG   GG+LG G  +D S P  +  L   +
Sbjct: 187 VQVSGLTDVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLT--D 244

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           V  +A G  HT A+   G ++ WG  +   G LG G+  +  +P K+ G  +   V +++
Sbjct: 245 VIAIAGGYAHTIALKSDGTVWAWG--DNEGGRLGDGSTTNRSIPVKVGGLSD---VIAIA 299

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            G  HT  + S G ++ +GD   G LG G   + STP +V    GL  V A  G +    
Sbjct: 300 GGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKV---SGLADVIAIAGGYSHTI 356

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
           V+            S G ++TWG  + G+LG G    R  P  V+ L +     ++ G  
Sbjct: 357 VLR-----------SDGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLAD--VIAIAGGVY 403

Query: 467 LTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            T+A+ + G ++  G   YGQLGD    N   P +V G LT   V  IA G YH   + S
Sbjct: 404 HTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNG-LTD--VIAIAGGYYHTIAMKS 460

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSL--VEALKDKQVKSIVCGTSFTAAI---CLHKW 580
              V+TWG    G+LG G   +R+ P+   +  +K     ++  G++   ++    L+ W
Sbjct: 461 DGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVSLSSALLNGW 520

Query: 581 VSG 583
           V+G
Sbjct: 521 VNG 523



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 161/340 (47%), Gaps = 31/340 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H   +   G V+++G     +LG G  +D S P  +  L +     +A G +HT
Sbjct: 596 ISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTD--AIAIAGGVYHT 653

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+   G ++TWG +N   G LG G  ++   P ++ G  +   V +++ G +HT  + S
Sbjct: 654 IALKSDGTVWTWGWNNS--GQLGDGTTINRSTPVQVIGLTD---VIAIAGGDYHTIALKS 708

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW-HTAAVVEVMVGSSS 416
            G ++T+G   +G LG G   + STP +V   KGL  + A  G + H+ A+         
Sbjct: 709 DGTVWTWGFNYYGQLGGGATTNRSTPVQV---KGLADIIAIAGGYVHSIAL--------- 756

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
               S G ++ WG    G+LG G     L P  V+ L +     ++ G+  T+AL + G 
Sbjct: 757 ---KSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTD--IIAIAGGYIHTIALKSDGT 811

Query: 477 VYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           V+  G    GQLGD    N   P +V G LT   V  +    YH   L S   V+TWG+ 
Sbjct: 812 VWAWGHNEGGQLGDGTTTNSSTPVQVSG-LTD--VIAVTARLYHTIALKSDGTVWTWGRN 868

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G+LG G T +R+ P  V  L D  V +I  G   T A+
Sbjct: 869 IYGQLGDGSTTERSLPVQVIGLTD--VIAIAGGYYHTIAL 906



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 149/316 (47%), Gaps = 27/316 (8%)

Query: 227  VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
            V+ + + DV  IA G  H   +     V++WG    G+LG G  ++ S P  +  L NI 
Sbjct: 1083 VQVSGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYLTNI- 1141

Query: 287  VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
               +A G  HT A+   G ++ WG     +G LG G+  +   P +++G  + I ++   
Sbjct: 1142 -IAIAGGYVHTIALKSDGTVWAWG--YNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEY 1198

Query: 347  CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
                HT  + S G ++ +G   +G LG G   + STP +V  L  +  +  A G  HT A
Sbjct: 1199 V---HTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDV--IAIAGGYVHTIA 1253

Query: 407  VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
            +             S G ++TWG  + G+LG G    RL P  V+ L +     ++ G  
Sbjct: 1254 L------------KSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTDA--IAIAGGDY 1299

Query: 467  LTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             T+AL +   V+  GS  YGQLGD     +L P +V G LT      IA GDYH   L S
Sbjct: 1300 HTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSG-LTDAI--AIAGGDYHTIALKS 1356

Query: 526  RTEVYTWGKGANGRLG 541
               V+ WG  + G+LG
Sbjct: 1357 DNTVWAWGSNSYGQLG 1372



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 191/430 (44%), Gaps = 40/430 (9%)

Query: 216  GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
            G   DS  P  V+ + + D   IA G  H   +   G V++WG    G+LG G   + S 
Sbjct: 626  GSTTDSSTP--VQVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRST 683

Query: 276  PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
            P  +  L +  V  +A G++HT A+   G ++TWG +   +G LG G   +   P ++ G
Sbjct: 684  PVQVIGLTD--VIAIAGGDYHTIALKSDGTVWTWGFNY--YGQLGGGATTNRSTPVQVKG 739

Query: 336  PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
              +   + +++ G  H+  + S G ++ +G   +G LG G      TP +V  L  +  +
Sbjct: 740  LAD---IIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTDI--I 794

Query: 396  RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
              A G  HT A+             S G ++ WG  + G+LG G       P  V+ L +
Sbjct: 795  AIAGGYIHTIAL------------KSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTD 842

Query: 456  PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIA 514
                     H  T+AL + G V+T G  +YGQLGD     + LP +V G LT   V  IA
Sbjct: 843  VIAVTARLYH--TIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIG-LTD--VIAIA 897

Query: 515  CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP--SLVEALKDKQVKSIVCGTSF- 571
             G YH   L S   V+ WG   N +LG+  T + + P  SL   +      +++ G++  
Sbjct: 898  GGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITGSTTC 957

Query: 572  --TAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYN-CGLVYCHTCSSKKSVK-ASMA 627
               +++ L+ WV G   +  +     F++       ++    + C T S+  S    S+ 
Sbjct: 958  VSLSSVLLNGWVDGNRAATTA----WFDYGTSSGVYFDTTATIPCGTSSAYISATLGSLT 1013

Query: 628  PNPNKPYRVC 637
            P     YR+ 
Sbjct: 1014 PWTTYYYRIA 1023



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 161/356 (45%), Gaps = 39/356 (10%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
           +F+P++           I+ G  H   +   G V++WG    G+LG    ++ S P  + 
Sbjct: 141 TFIPRS----------QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVS 190

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
            L   +V  +A G +HT A+   G ++ WG  N   G LG G+      P +++G  +  
Sbjct: 191 GLT--DVIAIAGGAYHTIALKSDGTVWAWG--NNEGGQLGDGSTTDRSTPVQVSGLTD-- 244

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            V +++ G  HT  + S G ++ +GD   G LG G   + S P +V  L  +  +  A G
Sbjct: 245 -VIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDV--IAIAGG 301

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             HT A+             S G ++ WGD + G+LG G    R  P  V+ L +     
Sbjct: 302 NAHTIAL------------KSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLAD--VIA 347

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYH 519
           ++ G+S T+ L + G V+T G    GQLGD    N   P +V G      V  IA G YH
Sbjct: 348 IAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLAD---VIAIAGGVYH 404

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              + S   ++ WG    G+LG G T + + P  V  L D  V +I  G   T A+
Sbjct: 405 TIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLTD--VIAIAGGYYHTIAM 458



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 156/332 (46%), Gaps = 31/332 (9%)

Query: 231  VVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV 290
            + L    I+ G  H   +   G V++ G    G+LG G   + S P  +  L +  V  +
Sbjct: 1037 IFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLTD--VIAI 1094

Query: 291  ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGP 349
            A G++HT A+     ++ WG SN ++G LG G   +  +P     P+  + ++ +++ G 
Sbjct: 1095 AGGDYHTIALKSDNTVWAWG-SN-SYGQLGDGTITNRSIPT----PVTYLTNIIAIAGGY 1148

Query: 350  WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW-HTAAVV 408
             HT  + S G ++ +G   +G LG G   + STP +V    GL  V A  G + HT A+ 
Sbjct: 1149 VHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQV---SGLTDVIAIAGEYVHTVAL- 1204

Query: 409  EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                        S G ++ WG    G+LG G    R  P  V+ L +     ++ G+  T
Sbjct: 1205 -----------KSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTD--VIAIAGGYVHT 1251

Query: 469  VALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
            +AL + G V+T G    GQLGD     +L P +V G LT      IA GDYH   L S  
Sbjct: 1252 IALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSG-LTDAI--AIAGGDYHTIALKSDN 1308

Query: 528  EVYTWGKGANGRLGHGDTDDRNFPSLVEALKD 559
             V+ WG  + G+LG G T +R  P  V  L D
Sbjct: 1309 TVWAWGSNSYGQLGDGTTINRLTPVQVSGLTD 1340



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 130/292 (44%), Gaps = 39/292 (13%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNC-----NFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 344
           + CG   T      GD+  W    C     N G + +G+E +  +P+           S 
Sbjct: 100 IPCGTGSTYVNATLGDLTPWTTYYCRIASQNIGGISYGSETTF-IPR-----------SQ 147

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
           +S G +HT  +   G ++T+G    G LG     + STP +V  L  +  +  A G +HT
Sbjct: 148 ISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTDV--IAIAGGAYHT 205

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
            A+             S G ++ WG+ + G+LG G    R  P  V+ L +     ++ G
Sbjct: 206 IAL------------KSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTD--VIAIAGG 251

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
           ++ T+AL + G V+  G    G+LGD    N  +P +V G    + V  IA G+ H   L
Sbjct: 252 YAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGG---LSDVIAIAGGNAHTIAL 308

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            S   V+ WG    G+LG G T +R+ P  V  L D  V +I  G S T  +
Sbjct: 309 KSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLAD--VIAIAGGYSHTIVL 358



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 177/430 (41%), Gaps = 79/430 (18%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+ WG   G G LG          G   D   P  V+ + + D+  IA G  H   + 
Sbjct: 760  GTVWAWGY-NGYGQLG---------DGSTTDHLTP--VQVSGLTDIIAIAGGYIHTIALK 807

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G V++WG   GG+LG G  ++ S P  +  L   +V  V    +HT A+   G ++TW
Sbjct: 808  SDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLT--DVIAVTARLYHTIALKSDGTVWTW 865

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            G     +G LG G+     LP ++ G  +   V +++ G +HT  + S G ++ +G    
Sbjct: 866  G--RNIYGQLGDGSTTERSLPVQVIGLTD---VIAIAGGYYHTIALKSDGAVWAWGYNGN 920

Query: 370  GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
              LG+    + STP        +R++R      ++     V+ GS++  + SS  L  W 
Sbjct: 921  NQLGNWSTKNSSTP--------VRSLRYDM---NSVTTPAVITGSTTCVSLSSVLLNGWV 969

Query: 430  DGDR----GRLGHG-------DKEARLVPTCVAALVEPNF-------------------- 458
            DG+R        +G       D  A +     +A +                        
Sbjct: 970  DGNRAATTAWFDYGTSSGVYFDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQNSRG 1029

Query: 459  ------------CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKL 505
                         Q+S G   T+ L   G V+  G+   GQLGD    N   P +V G L
Sbjct: 1030 ISYGSETIFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSG-L 1088

Query: 506  TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
            T   V  IA GDYH   L S   V+ WG  + G+LG G   +R+ P+ V  L +  + +I
Sbjct: 1089 TD--VIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYLTN--IIAI 1144

Query: 566  VCGTSFTAAI 575
              G   T A+
Sbjct: 1145 AGGYVHTIAL 1154



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 145/354 (40%), Gaps = 49/354 (13%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G  ++S  P  V    + DV  IA G  H   +   G V++WG    G+LG G  ++ S 
Sbjct: 428 GTTINSSTPVQVNG--LTDVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRST 485

Query: 276 P--KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
           P  + +  +K++    V  G   TC V+LS  +        N  + G+G   + W     
Sbjct: 486 PAQRSLSGMKSVATPTVTTGSA-TC-VSLSSAL-------LNGWVNGNGVATTAWFDYGT 536

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF-------GDGTFGVLGHGDRISVSTPREV 386
           +  +      ++SCG   T V  + G L  +            G + +G   +   PR  
Sbjct: 537 STGMYFDATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQNIGGIYYGSETTF-MPRT- 594

Query: 387 DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV 446
                    + + G +HT  +               G ++ +G     +LG G       
Sbjct: 595 ---------QISAGAYHTLTLKP------------DGTVWAYGANWNSQLGDGSTTDSST 633

Query: 447 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKL 505
           P  V+ L +     ++ G   T+AL + G V+T G    GQLGD    N   P +V G L
Sbjct: 634 PVQVSGLTDA--IAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIG-L 690

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD 559
           T   V  IA GDYH   L S   V+TWG    G+LG G T +R+ P  V+ L D
Sbjct: 691 TD--VIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLAD 742



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 7/159 (4%)

Query: 227  VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
            V+ + + DV  IA G  H   +   G V++WG    G+LG G   +   P  +  L +  
Sbjct: 1233 VQVSGLTDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTD-- 1290

Query: 287  VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
               +A G++HT A+     ++ WG SN ++G LG G  ++   P +++G  + I   +++
Sbjct: 1291 AIAIAGGDYHTIALKSDNTVWAWG-SN-SYGQLGDGTTINRLTPVQVSGLTDAI---AIA 1345

Query: 347  CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPRE 385
             G +HT  + S   ++ +G  ++G LG     +  TP +
Sbjct: 1346 GGDYHTIALKSDNTVWAWGSNSYGQLGDVSTANSLTPAQ 1384


>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
           CCMP2712]
          Length = 279

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 136/286 (47%), Gaps = 18/286 (6%)

Query: 256 SWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNC 314
           SWG      LGHG  ++  +PK I +LK   V  VA G  H  A+  SG +Y+WG G N 
Sbjct: 1   SWGTGFNLCLGHGSHANEKYPKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLN- 59

Query: 315 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 374
             G LGHGN      PK L    +      ++CG  H+A +T  G+L+++G G  G LG+
Sbjct: 60  --GRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGN 117

Query: 375 GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRG 434
           G+R    TP  V  L+ L     ACG   T A                G LF+WG G  G
Sbjct: 118 GERHDQWTPNLVLRLRDLVVSYVACGTNTTFACT------------GGGLLFSWGSGKHG 165

Query: 435 RLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN 494
            LG GD+E RL P+ V    E    +V+CG    +ALT  G ++  G    G  G    +
Sbjct: 166 CLGLGDREDRLEPSLVRLREEDRIIRVACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTS 225

Query: 495 GKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             L P ++     +  V  ++CG +H A LT R +++ +G G   R
Sbjct: 226 EVLSPHKLPMPEDRTIV-SMSCGRWHSAYLTIRGDIFCFGSGRGFR 270



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 122/261 (46%), Gaps = 18/261 (6%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL- 282
           PK ++S     V  +A G +H + +   G+++SWG  L GRLGHG   D S PK++ +  
Sbjct: 21  PKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTK 80

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           KN     +ACG  H+  +T  G +Y+WG G N   G LG+G     W P  L   L  + 
Sbjct: 81  KNCTAVQIACGAAHSAYLTQDGKLYSWGRGLN---GELGNGERHDQWTP-NLVLRLRDLV 136

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           VS V+CG   T   T  G LF++G G  G LG GDR     P  V   +  R +R ACG 
Sbjct: 137 VSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACGE 196

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            H  A+ E             GKL+ WG G  G  G G     L P  +    +     +
Sbjct: 197 HHCLALTE------------DGKLWGWGRGTGGCHGLGHTSEVLSPHKLPMPEDRTIVSM 244

Query: 462 SCGHSLTVALTTTGHVYTMGS 482
           SCG   +  LT  G ++  GS
Sbjct: 245 SCGRWHSAYLTIRGDIFCFGS 265



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 14/258 (5%)

Query: 319 LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 378
           LGHG+  +   PK +   L+   V  V+ GP H + + S+GQ++++G G  G LGHG+  
Sbjct: 10  LGHGSHANEKYPKPIK-SLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQ 68

Query: 379 SVSTPREVDSLK-GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG 437
             S P+ + S K     V+ ACG  H+A + +             GKL++WG G  G LG
Sbjct: 69  DSSAPKMLASTKKNCTAVQIACGAAHSAYLTQ------------DGKLYSWGRGLNGELG 116

Query: 438 HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL 497
           +G++  +  P  V  L +     V+CG + T A T  G +++ GS  +G LG      +L
Sbjct: 117 NGERHDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRL 176

Query: 498 PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
              +     ++ +  +ACG++H   LT   +++ WG+G  G  G G T +   P  +   
Sbjct: 177 EPSLVRLREEDRIIRVACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTSEVLSPHKLPMP 236

Query: 558 KDKQVKSIVCGTSFTAAI 575
           +D+ + S+ CG   +A +
Sbjct: 237 EDRTIVSMSCGRWHSAYL 254



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 102/212 (48%), Gaps = 5/212 (2%)

Query: 198 CTGDGILGGGIHRSGSYA-GVKMDSFVPKAVESAVV-LDVQNIACGGRHAALVTKQGEVF 255
           C+   I   GI  +G    G   DS  PK + S         IACG  H+A +T+ G+++
Sbjct: 46  CSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLY 105

Query: 256 SWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 315
           SWG  L G LG+G   D   P L+  L+++ V  VACG + T A T  G +++WG     
Sbjct: 106 SWGRGLNGELGNGERHDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSG--K 163

Query: 316 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
            G LG G+     L   L    E   +  V+CG  H   +T  G+L+ +G GT G  G G
Sbjct: 164 HGCLGLGDREDR-LEPSLVRLREEDRIIRVACGEHHCLALTEDGKLWGWGRGTGGCHGLG 222

Query: 376 DRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
               V +P ++   +    V  +CG WH+A +
Sbjct: 223 HTSEVLSPHKLPMPEDRTIVSMSCGRWHSAYL 254



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 4/116 (3%)

Query: 198 CTGDGIL---GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 254
           CTG G+L   G G H      G + D   P  V       +  +ACG  H   +T+ G++
Sbjct: 150 CTGGGLLFSWGSGKHGCLGL-GDREDRLEPSLVRLREEDRIIRVACGEHHCLALTEDGKL 208

Query: 255 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           + WG   GG  G G  S+V  P  +   ++  +  ++CG  H+  +T+ GD++ +G
Sbjct: 209 WGWGRGTGGCHGLGHTSEVLSPHKLPMPEDRTIVSMSCGRWHSAYLTIRGDIFCFG 264


>gi|403331221|gb|EJY64545.1| hypothetical protein OXYTRI_15423 [Oxytricha trifallax]
          Length = 410

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 160/336 (47%), Gaps = 37/336 (11%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV--SHPKLID 280
           +P+ +E+   L+V+ +  G RH+A++T+ G+++++G    G LGHG + DV   +P+L++
Sbjct: 42  IPQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKFDNPQLVE 101

Query: 281 ALKNINVEL--VACGEHHTCAVTLSGDMYTW--GGSNCNF--------GLLGHGNEMSLW 328
             +  N ++  V  GE+HT A+T  G++YTW  GG    F        G LGHG++   +
Sbjct: 102 FFEKRNKKIVEVGLGEYHTAALTSDGEVYTWGYGGKQTLFNWMITQEVGGLGHGDKKHHF 161

Query: 329 LPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 387
            PKK++      I VS +  G +HT  ++  G L+T+G G FGVLG+       TP   D
Sbjct: 162 FPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLFGVLGNASNSYSLTPMLND 221

Query: 388 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK------ 441
               ++  +    +       E      + +  + G L+ WG  DRG+LG G        
Sbjct: 222 EFHIMKQEKPDLKIQKIDVADEY-----TGALMNDGTLYVWGKNDRGQLGTGSGIGIDMI 276

Query: 442 EARLVPTCVAAL---VEPNFCQ-VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL 497
           E+  VP  +  L    +P+  +    G +  +      ++Y +G  +         + K 
Sbjct: 277 ESENVPIAITVLDKNDQPHLVKDFHPGQNTMIIRDDEDNIYKVGLKL-------DYSPKQ 329

Query: 498 PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
                 +  K  V +++CG  H  VL ++ ++  WG
Sbjct: 330 VNIFNEEFKKEDVTQLSCGRKHYCVLNNQNKLMVWG 365



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 42/242 (17%)

Query: 329 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--ISVSTPREV 386
           +P+K+    + ++V  ++ G  H+AV+T  G+L+TFG G +G LGHG    +    P+ V
Sbjct: 42  IPQKMEA-FDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKFDNPQLV 100

Query: 387 DSL--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR----------- 433
           +    +  + V    G +HTAA+             S G+++TWG G +           
Sbjct: 101 EFFEKRNKKIVEVGLGEYHTAAL------------TSDGEVYTWGYGGKQTLFNWMITQE 148

Query: 434 -GRLGHGDKEARLVPTCVAALVEPNFCQVS---CGHSLTVALTTTGHVYTMGSPVYGQLG 489
            G LGHGDK+    P  V    E N  +VS    G   T+A++ TG +YT G  ++G LG
Sbjct: 149 VGGLGHGDKKHHFFPKKVD-FFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLFGVLG 207

Query: 490 D--------PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
           +        P  N +     + K     +++I   D +   L +   +Y WGK   G+LG
Sbjct: 208 NASNSYSLTPMLNDEFHIMKQEKPDLK-IQKIDVADEYTGALMNDGTLYVWGKNDRGQLG 266

Query: 542 HG 543
            G
Sbjct: 267 TG 268



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 70/162 (43%), Gaps = 24/162 (14%)

Query: 446 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-----DPKANGKLPTR 500
           +P  + A  + N  +++ G   +  +T  G +YT GS  +G LG     D K +      
Sbjct: 42  IPQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKFDNPQLVE 101

Query: 501 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDR 548
              K  K  VE +  G+YH A LTS  EVYTWG G              G LGHGD    
Sbjct: 102 FFEKRNKKIVE-VGLGEYHTAALTSDGEVYTWGYGGKQTLFNWMITQEVGGLGHGDKKHH 160

Query: 549 NFPSLVEALKDKQVK--SIVCGTSFTAAIC----LHKWVSGV 584
            FP  V+  +   +K   I+ G   T AI     L+ W  G+
Sbjct: 161 FFPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGL 202



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 41/233 (17%)

Query: 377 RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL 436
           +I    P+++++   L   +   G+ H+A + E             GKL+T+G G+ G L
Sbjct: 37  QIPKGIPQKMEAFDKLNVKKLNIGLRHSAVITE------------DGKLYTFGSGNWGPL 84

Query: 437 GHG-DKEARL-VPTCVAALVEPN--FCQVSCGHSLTVALTTTGHVYTMG----------- 481
           GHG +K+ +   P  V    + N    +V  G   T ALT+ G VYT G           
Sbjct: 85  GHGSEKDVKFDNPQLVEFFEKRNKKIVEVGLGEYHTAALTSDGEVYTWGYGGKQTLFNWM 144

Query: 482 -SPVYGQLGD-PKANGKLPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANG 538
            +   G LG   K +   P +V+     N  V  I  G YH   ++   ++YTWG+G  G
Sbjct: 145 ITQEVGGLGHGDKKHHFFPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLFG 204

Query: 539 RLGHGDTD-------DRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKW 580
            LG+           +  F  + +   D +++ I     +T A+     L+ W
Sbjct: 205 VLGNASNSYSLTPMLNDEFHIMKQEKPDLKIQKIDVADEYTGALMNDGTLYVW 257


>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 419

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 172/366 (46%), Gaps = 50/366 (13%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK----NINVELVAC 292
           +++CGG H   +T+ G VF+ G    G+LG G     S P  +D ++    +  V  ++ 
Sbjct: 71  SLSCGGAHTLFLTEGGRVFATGLNDFGQLGIGS----SMPHTLDPVEVSGFHEKVVQISA 126

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G HH+CAVT  G+++ WG ++     LG      +  P+K++  L  + V   + G  H+
Sbjct: 127 GNHHSCAVTADGELFVWGKNSSGQLGLGKSAGKVVSTPRKVD-YLADVRVKMTALGSEHS 185

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISV---------STPREVDSLKGLRTVRAACGVWH 403
            VVT  G+  ++G    G LGHG + S           TPR + +L G++  R A G+ H
Sbjct: 186 IVVTEDGEALSWGAAGGGRLGHGHKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLH 245

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VS 462
           +A + E             G +F +G      LG  +   R  P+ V    E  F + V+
Sbjct: 246 SACIDE------------KGTVFIFGQKTEKVLGRSNDAPR--PSVVE---EIQFSEEVA 288

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
           CG   T A+T  G +Y+ GS   G LG       + P  V   L K  V +++CG  H A
Sbjct: 289 CGGYHTCAVTDRGDLYSWGSNENGCLGLGGTGMVRFPEVVSSSLFKLPVSKVSCGWKHTA 348

Query: 522 VLTSRTEVYTWGKG------------ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 569
           V++   ++YTWG G            + G+LGHG+  D   P +VE  K+ +   + CG 
Sbjct: 349 VISGE-DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYCEPMMVELHKNARAVHVSCGF 407

Query: 570 SFTAAI 575
           + T AI
Sbjct: 408 NHTGAI 413



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/234 (36%), Positives = 128/234 (54%), Gaps = 24/234 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDS--FVPKAVESAVVLDVQNIACGGRHAAL 247
           G+   WG   G G LG G H+S S+ G  M S  + P+ +++   + ++ IA G  H+A 
Sbjct: 192 GEALSWG-AAGGGRLGHG-HKS-SFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSAC 248

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           + ++G VF +G++    LG    +D   P +++ ++    E VACG +HTCAVT  GD+Y
Sbjct: 249 IDEKGTVFIFGQKTEKVLGR--SNDAPRPSVVEEIQF--SEEVACGGYHTCAVTDRGDLY 304

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG-- 365
           +WG SN N G LG G    +  P+ ++  L  + VS VSCG  HTAV+ S   ++T+G  
Sbjct: 305 SWG-SNEN-GCLGLGGTGMVRFPEVVSSSLFKLPVSKVSCGWKHTAVI-SGEDIYTWGWG 361

Query: 366 --DGTF--------GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             +GTF        G LGHG+ +    P  V+  K  R V  +CG  HT A++E
Sbjct: 362 GANGTFFEEGHSSGGQLGHGNDVDYCEPMMVELHKNARAVHVSCGFNHTGAILE 415


>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Cucumis sativus]
          Length = 386

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 150/314 (47%), Gaps = 35/314 (11%)

Query: 257 WGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 315
           WG    GRLG G +DS  S P    +     ++ +ACG  HT  +T SG +Y  G +N  
Sbjct: 85  WGNGDFGRLGLGNLDSQWS-PVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNN-- 141

Query: 316 FGLLGHGNEMSLWL-PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 374
           FG LG  +E      P ++  P E +H+S+   G  H+ VVT+ G+L+ +G  + G LG 
Sbjct: 142 FGQLGISDEKRFSTEPVEVRIPKEAMHISA---GYNHSCVVTADGELYMWGVNSNGQLGL 198

Query: 375 GDR--ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           G +   +V  P +VDSL G+   RAA G  H+ AV +             G++F+WGDG 
Sbjct: 199 GKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVAD------------GGEVFSWGDGR 246

Query: 433 RGRLGHGDKEARL---------VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            GRLGHG +   L          P  +  L       V+ G   +  +   G VY  G  
Sbjct: 247 SGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGER 306

Query: 484 VYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
              ++   +AN    P+ +   L     EE+ACG YH  VLT   ++Y+WG   NG LG+
Sbjct: 307 ATNRVSFGEANKATTPSLISTLLD---CEEVACGGYHTCVLTKGGDLYSWGSNENGCLGN 363

Query: 543 GDTDDRNFPSLVEA 556
           G T   + P  VE 
Sbjct: 364 GSTSVSHLPERVEG 377



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 140/284 (49%), Gaps = 28/284 (9%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ IACGG H   +T+ G V++ G    G+LG   +   S  + ++         ++ G 
Sbjct: 115 LKGIACGGAHTLFLTESGRVYATGLNNFGQLGISDEKRFS-TEPVEVRIPKEAMHISAGY 173

Query: 295 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           +H+C VT  G++Y WG  SN   G LG  +  ++ LP K++  L+GI +   + G  H+ 
Sbjct: 174 NHSCVVTADGELYMWGVNSNGQLG-LGKKSAKAVHLPTKVD-SLDGIVIKRAALGSDHSI 231

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDR---------ISVSTPREVDSLKGLRTVRAACGVWHT 404
            V   G++F++GDG  G LGHG            S  TPR +  L+G++    A G+ H+
Sbjct: 232 AVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHS 291

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
           A V E            +G ++ +G+    R+  G+      P+ ++ L++    +V+CG
Sbjct: 292 ACVDE------------NGAVYIFGERATNRVSFGEANKATTPSLISTLLDCE--EVACG 337

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKAN-GKLPTRVEGKLTK 507
              T  LT  G +Y+ GS   G LG+   +   LP RVEG  +K
Sbjct: 338 GYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSK 381



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 112/239 (46%), Gaps = 26/239 (10%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS--DVSHPKLI 279
           F  + VE  +  +  +I+ G  H+ +VT  GE++ WG    G+LG G  S   V  P  +
Sbjct: 153 FSTEPVEVRIPKEAMHISAGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKV 212

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL--WLPK------ 331
           D+L  I ++  A G  H+ AV   G++++WG      G LGHG+E +   +L        
Sbjct: 213 DSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRS--GRLGHGHESTFLGFLKSTSEHTP 270

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
           +L   LEGI V  V+ G  H+A V   G ++ FG+     +  G+    +TP  + +L  
Sbjct: 271 RLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLISTL-- 328

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
           L     ACG +HT  + +             G L++WG  + G LG+G      +P  V
Sbjct: 329 LDCEEVACGGYHTCVLTK------------GGDLYSWGSNENGCLGNGSTSVSHLPERV 375



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 22/207 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++++WG    +G LG G   + +         +P  V+S   + ++  A G  H+  V 
Sbjct: 183 GELYMWG-VNSNGQLGLGKKSAKAV-------HLPTKVDSLDGIVIKRAALGSDHSIAVA 234

Query: 250 KQGEVFSWGEELGGRLGHGVDSDV---------SHPKLIDALKNINVELVACGEHHTCAV 300
             GEVFSWG+   GRLGHG +S             P+LI  L+ I V+ VA G  H+  V
Sbjct: 235 DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACV 294

Query: 301 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
             +G +Y +G    N    G  N+ +   P  ++  L+      V+CG +HT V+T  G 
Sbjct: 295 DENGAVYIFGERATNRVSFGEANKAT--TPSLISTLLD---CEEVACGGYHTCVLTKGGD 349

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVD 387
           L+++G    G LG+G       P  V+
Sbjct: 350 LYSWGSNENGCLGNGSTSVSHLPERVE 376


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 166/352 (47%), Gaps = 30/352 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK-NINVELVA-C 292
           V ++ACG    A++ + G+V++ G    G+   G    V   +    L  N  V + +  
Sbjct: 69  VVDVACGNEQTAILFEDGDVYTCGYNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSGN 128

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G  H  A+  +G++YT G +    G LG G+  ++ +   L   L G  V+ V C  +HT
Sbjct: 129 GSEHLAALHANGNLYTVGFNM--RGQLGLGSSTTV-MEATLVEELAGKRVADVGCSYFHT 185

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           A+V   G L+  G   +G LG GD R     PR V+       +  ACG  +T A +   
Sbjct: 186 AIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTIASLR-- 243

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLG-HGDKEARLVPTCVAA----LVEPNFCQVSCGHS 466
                      G +  +G  D G+LG     E    PT +AA    LV P   Q+SCG+ 
Sbjct: 244 ----------DGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVP---QLSCGYH 290

Query: 467 LTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
            T  +T  G VYT G   YGQLG   K +   P RVE  L +  + ++ACG YH  VL+ 
Sbjct: 291 HTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVE-SLARMRITQVACGCYHTLVLSD 349

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
             +V+ +G+  +G+LG   + D   P L+  L++K V  +  G  F  ++CL
Sbjct: 350 DGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAG--FYHSVCL 399



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 156/358 (43%), Gaps = 37/358 (10%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN----VELVACGEHHTCAVTLSGDMYTW 309
           V+S+G+   G L  G  +D S P  +D L N N    V  VACG   T  +   GD+YT 
Sbjct: 33  VYSFGQNTYGELALGDTTDRSAPIRVD-LGNSNHGRRVVDVACGNEQTAILFEDGDVYTC 91

Query: 310 GGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           G ++     +G    + +L     L+     + + S + G  H A + + G L+T G   
Sbjct: 92  GYNDSGQCAIGTTERVPTLRFSPGLSSN-RTVRIFSGN-GSEHLAALHANGNLYTVGFNM 149

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G LG G   +V     V+ L G R     C  +HTA V++            +G L+  
Sbjct: 150 RGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMD------------NGDLYAC 197

Query: 429 GDGDRGRLGHGD-KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           G  D G+LG GD +   LVP  V          V+CG   T+A    G V   G   +GQ
Sbjct: 198 GCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKNDHGQ 257

Query: 488 LGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
           LG    +  +  PTR+   L +  V +++CG +H AV+T    VYT+G+   G+LG G  
Sbjct: 258 LGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHK 317

Query: 546 DDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRH 603
                P+ VE+L   ++  + CG       C H  V   D  +       F F R  H
Sbjct: 318 MHMARPARVESLARMRITQVACG-------CYHTLVLSDDGKV-------FPFGRNNH 361



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 152/347 (43%), Gaps = 41/347 (11%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDALKNINVELVACG 293
           V ++ C   H A+V   G++++ G    G+LG G   +    P+ ++      V  VACG
Sbjct: 175 VADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACG 234

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLG-HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           +H+T A    G +  +G ++   G LG       +  P +L  PL+ + V  +SCG  HT
Sbjct: 235 QHYTIASLRDGGVVAFGKND--HGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHT 292

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           AVVT  G ++TFG   +G LG G ++ ++ P  V+SL  +R  + ACG +HT  + +   
Sbjct: 293 AVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHTLVLSD--- 349

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                     GK+F +G  + G+LG       L P  ++ L      +V+ G   +V L 
Sbjct: 350 ---------DGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCLV 400

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN------FVEEIACGDYHVAVLTSR 526
                     P  G+    + +G L   +   L  +      FV E      H  +L +R
Sbjct: 401 ---------GPTEGETPPAQGSGTLNGDLRKMLNNSTRSDVTFVVEGRPLFAHSCILVAR 451

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFP--------SLVEALKDKQVKSI 565
            E     K  +GR+  G   +   P        +L+E L   QV ++
Sbjct: 452 CE--PLEKMLDGRMKDGSLSEIIIPEYSYDVFAALMEFLYTDQVAAL 496



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 129/295 (43%), Gaps = 26/295 (8%)

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
           G  H A +   G +++ G  + G+LG G  + V    L++ L    V  V C   HT  V
Sbjct: 129 GSEHLAALHANGNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIV 188

Query: 301 TLSGDMYTWGGSNCN-FGLLGHGNEMSLWLPKKLNGPLEGIH---VSSVSCGPWHTAVVT 356
             +GD+Y  G   CN +G LG G+  +  L  +   P+E      V +V+CG  +T    
Sbjct: 189 MDNGDLYACG---CNDYGQLGLGDHRNGELVPR---PVEYFFRRPVLAVACGQHYTIASL 242

Query: 357 SAGQLFTFGDGTFGVLGHGDRIS--VSTP-REVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
             G +  FG    G LG  D  S  VS P R    L  L   + +CG  HTA V E    
Sbjct: 243 RDGGVVAFGKNDHGQLGL-DSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTE---- 297

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                    G ++T+G  D G+LG G K     P  V +L      QV+CG   T+ L+ 
Sbjct: 298 --------DGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHTLVLSD 349

Query: 474 TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
            G V+  G   +GQLG   +   L  ++   L    V ++A G YH   L   TE
Sbjct: 350 DGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCLVGPTE 404



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G KM    P  VES   + +  +ACG  H  +++  G+VF +G    G+LG     D   
Sbjct: 315 GHKMHMARPARVESLARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGLETSVDCLS 374

Query: 276 PKLIDALKNINVELVACGEHHTCAVT 301
           P+LI  L+N  V  VA G +H+  + 
Sbjct: 375 PQLISTLRNKTVTKVAAGFYHSVCLV 400


>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 497

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 155/315 (49%), Gaps = 22/315 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACG 293
           V  ++    HAA + + GEVF+ G+      GH   S  +  P+ ++ALK +  + VA G
Sbjct: 165 VVQVSASHNHAAYILESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAG 224

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHT 352
            + T  +T +G +Y+ G +    G LGHG+ +    PK +    EGI  V+ ++ GP + 
Sbjct: 225 LNFTVFLTRTGHVYSCGTNT--HGQLGHGDTLDRPTPKIIE-SFEGIGSVAQIAAGPSYV 281

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL--KGLRTVRAACGVWHTAAVVEV 410
             VT +G +++FG G+   LGHG++ +   PR + +   K L  VR + G  H  A+   
Sbjct: 282 LAVTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALD-- 339

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                     SSG ++TWG G  G LGHGD+  + +P  + +L      QV      T  
Sbjct: 340 ----------SSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFV 389

Query: 471 LTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           L   G V+  G   +G LG P    ++  +  R+   L  + V +I+ G YH   +TS+ 
Sbjct: 390 LVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGLYHTVAVTSQG 449

Query: 528 EVYTWGKGANGRLGH 542
           +V+ +G     +LGH
Sbjct: 450 QVFGFGDNERAQLGH 464



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 116/239 (48%), Gaps = 21/239 (8%)

Query: 216 GVKMDSFVPKAVESAV-VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 274
           G  +D   PK +ES   +  V  IA G  +   VT  G V+S+G      LGHG   +  
Sbjct: 251 GDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNFCLGHGEQHNEF 310

Query: 275 HPKLIDAL--KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
           HP+ I     KN++V  V+ G+ H  A+  SG +YTWG   C  G LGHG+E+   LP+ 
Sbjct: 311 HPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYC--GALGHGDEIDKTLPEP 368

Query: 333 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---ISVSTPREVDSL 389
           LN  L+      V      T V+   G +F FG   FG LG  DR     V  PR +DSL
Sbjct: 369 LN-SLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSL 427

Query: 390 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
           +  R  + + G++HT AV             S G++F +GD +R +LGH      L PT
Sbjct: 428 RAHRVSQISTGLYHTVAVT------------SQGQVFGFGDNERAQLGHDTLRGCLEPT 474



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 137/284 (48%), Gaps = 16/284 (5%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P+ VE+   +  + +A G      +T+ G V+S G    G+LGHG   D   PK+I++
Sbjct: 205 FRPRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSCGTNTHGQLGHGDTLDRPTPKIIES 264

Query: 282 LKNI-NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEG 339
            + I +V  +A G  +  AVT SG +Y++ GS  NF  LGHG + + + P+ +     + 
Sbjct: 265 FEGIGSVAQIAAGPSYVLAVTDSGVVYSF-GSGSNF-CLGHGEQHNEFHPRAIQTFRRKN 322

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           +HV  VS G  H   + S+G ++T+G G  G LGHGD I  + P  ++SLK    V+   
Sbjct: 323 LHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCA 382

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTW-GDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
               T  +V+          C  G  F W G G  G    G  +  + P  + +L     
Sbjct: 383 RKRKTFVLVD--------GGCVFG--FGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRV 432

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRV 501
            Q+S G   TVA+T+ G V+  G     QLG     G L PT +
Sbjct: 433 SQISTGLYHTVAVTSQGQVFGFGDNERAQLGHDTLRGCLEPTEI 476



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 133/274 (48%), Gaps = 21/274 (7%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP-KKLNGPLEGIHVSSVSCG 348
           +  G +HT  ++ S  +Y+ G S C  G+LGHG E +  +   ++  P     V  VS  
Sbjct: 116 ITTGRYHTLLISNS-SVYSCGSSLC--GVLGHGPETTQCVSFSRITFP-SLARVVQVSAS 171

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAV 407
             H A +  +G++FT GD +    GH D    +  PR V++LKG+   + A G+  T  +
Sbjct: 172 HNHAAYILESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFL 231

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP-NFCQVSCGHS 466
                         +G +++ G    G+LGHGD   R  P  + +     +  Q++ G S
Sbjct: 232 TR------------TGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPS 279

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNF-VEEIACGDYHVAVLT 524
             +A+T +G VY+ GS     LG  + + +  P  ++    KN  V  ++ GD HV  L 
Sbjct: 280 YVLAVTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALD 339

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 340 SSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLK 373



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 148/347 (42%), Gaps = 33/347 (9%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVD-------SDVSHPKLIDALKNINVELVACGE 294
           GR+  L+     V+S G  L G LGHG +       S ++ P L   ++      V+   
Sbjct: 119 GRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQ------VSASH 172

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
           +H   +  SG+++T G  N +F   GH +        +    L+G+    V+ G   T  
Sbjct: 173 NHAAYILESGEVFTCG-DNSSF-CCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVF 230

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV-RAACGVWHTAAVVEVMVG 413
           +T  G +++ G  T G LGHGD +   TP+ ++S +G+ +V + A G  +  AV +    
Sbjct: 231 LTRTGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTD---- 286

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF--CQVSCGHSLTVAL 471
                   SG ++++G G    LGHG++     P  +      N    +VS G    VAL
Sbjct: 287 --------SGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVAL 338

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
            ++G VYT G    G LG      K        L  +   ++        VL     V+ 
Sbjct: 339 DSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVFG 398

Query: 532 WGKGANGRLGHGD---TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +G    G LG  D   +D    P ++++L+  +V  I  G   T A+
Sbjct: 399 FGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGLYHTVAV 445



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 24/228 (10%)

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL-RTVRAACGVWH 403
           ++ G +HT +++++  +++ G    GVLGHG   +        +   L R V+ +    H
Sbjct: 116 ITTGRYHTLLISNS-SVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNH 174

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQVS 462
            A ++E            SG++FT GD      GH D    +  P  V AL      QV+
Sbjct: 175 AAYILE------------SGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVA 222

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF-----VEEIACGD 517
            G + TV LT TGHVY+ G+  +GQLG    +G    R   K+ ++F     V +IA G 
Sbjct: 223 AGLNFTVFLTRTGHVYSCGTNTHGQLG----HGDTLDRPTPKIIESFEGIGSVAQIAAGP 278

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
            +V  +T    VY++G G+N  LGHG+  +   P  ++  + K +  +
Sbjct: 279 SYVLAVTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVV 326


>gi|357460949|ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489804|gb|AES71007.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 464

 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 106/176 (60%), Gaps = 4/176 (2%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ IACGGRH+A++T  G V ++G  L G+ G G   D   P  + +L  I +E VA G 
Sbjct: 289 IKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGL 348

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTA 353
            HT   +  GD+Y +GG+   FG LG G++ +  LP+ L+ P LE ++V ++SCG  HTA
Sbjct: 349 WHTVCTSADGDVYAFGGN--QFGQLGTGSDQAETLPRLLDCPSLENVNVKTISCGARHTA 406

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           +VT  G++F++G   +G LG GD I  + P EV +++G      ACG WHT  + E
Sbjct: 407 LVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV-AIEGCIAKNVACGWWHTLLLAE 461



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 35/252 (13%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRA 397
           G+ ++SV+ G  HT V++  GQ++ +G G  G LG G R+  VS+P  +  +     V+ 
Sbjct: 214 GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQG 273

Query: 398 -------------------ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH 438
                              ACG  H+A + +            +G +  +G G  G+ G 
Sbjct: 274 SMSSEGHNFRIPGSCIKAIACGGRHSAVITD------------AGAVLAFGWGLYGQCGQ 321

Query: 439 GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-L 497
           G  +  L PTCV++L+      V+ G   TV  +  G VY  G   +GQLG      + L
Sbjct: 322 GSTDDELSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETL 381

Query: 498 PTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
           P  ++    +N  V+ I+CG  H A++T   +V++WG    G+LG GD  DRN PS V A
Sbjct: 382 PRLLDCPSLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV-A 440

Query: 557 LKDKQVKSIVCG 568
           ++    K++ CG
Sbjct: 441 IEGCIAKNVACG 452



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 133/299 (44%), Gaps = 62/299 (20%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVA 291
           + + ++A GGRH  +++  G+V+ WG    G+LG G     VS P +I  + + ++    
Sbjct: 215 VKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSL---- 270

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
                     + G M +           GH            N  + G  + +++CG  H
Sbjct: 271 ----------VQGSMSS----------EGH------------NFRIPGSCIKAIACGGRH 298

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +AV+T AG +  FG G +G  G G      +P  V SL G++    A G+WHT       
Sbjct: 299 SAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLWHTV------ 352

Query: 412 VGSSSSSNCSS--GKLFTWGDGDRGRLGHGDKEARLVPTCV--AALVEPNFCQVSCGHSL 467
                   C+S  G ++ +G    G+LG G  +A  +P  +   +L   N   +SCG   
Sbjct: 353 --------CTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLENVNVKTISCGARH 404

Query: 468 TVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRV--EGKLTKNFVEEIACGDYHVAVL 523
           T  +T  G V++ G   YGQLG     +  +P+ V  EG + KN    +ACG +H  +L
Sbjct: 405 TALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEVAIEGCIAKN----VACGWWHTLLL 459



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 80/138 (57%), Gaps = 6/138 (4%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D   P  V S + + ++ +A G  H    +  G+V+++G    G+LG G D   + P+L+
Sbjct: 326 DELSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLL 385

Query: 280 D--ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL 337
           D  +L+N+NV+ ++CG  HT  VT +G +++WG +   +G LG G+ +   +P ++   +
Sbjct: 386 DCPSLENVNVKTISCGARHTALVTDNGKVFSWGWNK--YGQLGLGDVIDRNIPSEV--AI 441

Query: 338 EGIHVSSVSCGPWHTAVV 355
           EG    +V+CG WHT ++
Sbjct: 442 EGCIAKNVACGWWHTLLL 459



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 147/385 (38%), Gaps = 67/385 (17%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKLIDALKNINVELV 290
           DV    CG   A  +++ G++ +WG      LG    +   H   P+       +++   
Sbjct: 48  DVSGGGCG--FAMAISESGKLITWGST--DDLGQSYVTSGKHGETPEPFSLPNEVSIVKA 103

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNC-----NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
           A    H  A T  G++YTWG   C      FG    G        K   G         V
Sbjct: 104 ASAWAHCVAATDCGEVYTWGWKECIPSGKVFGETSQGVSPE----KDAQGKPSSFLTEQV 159

Query: 346 SCGPWHTAVVTSAGQLFTFGDGT------------FGVLGHGDRISVSTPREVDSLKGLR 393
           S     + V  S G   + G+ +                  GD I  + P  V    G++
Sbjct: 160 SS---RSQVSKSTGGTVSSGEESSKRRKVSSAKQAAQTSSSGDDILTAMPCLVTLNPGVK 216

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT----- 448
               A G  HT  + ++            G+++ WG G  G+LG G +  R+V +     
Sbjct: 217 ITSVAAGGRHTLVLSDI------------GQVWGWGYGGEGQLGLGSR-VRMVSSPHIIP 263

Query: 449 CV--AALVE------------PNFC--QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
           C+  ++LV+            P  C   ++CG   +  +T  G V   G  +YGQ G   
Sbjct: 264 CIDSSSLVQGSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGS 323

Query: 493 ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
            + +L       L    +E +A G +H    ++  +VY +G    G+LG G       P 
Sbjct: 324 TDDELSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPR 383

Query: 553 LVE--ALKDKQVKSIVCGTSFTAAI 575
           L++  +L++  VK+I CG   TA +
Sbjct: 384 LLDCPSLENVNVKTISCGARHTALV 408


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 164/342 (47%), Gaps = 36/342 (10%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN--VELVACGEHHTCAVTLSGDMYTWGG 311
           +F+WG     +LG G       PKL+  L  +   +  V+ G  H  A+  +G ++TWG 
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWG- 238

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
             C+ G LG  +   +  P +++  L+   +  V+CG + +A ++   ++FT+G G+ G 
Sbjct: 239 -LCDHGRLGLKSGKDVPYPTRVDF-LKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQ 296

Query: 372 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           LGH ++     PR V +L  +  V+ A G  H AA+               G ++TWG+G
Sbjct: 297 LGHVEKSDEWLPRSVAALHHIPIVQVALGYEHMAAL------------SLDGDVYTWGEG 344

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVS---------CGHSLTVALTTTGHVYTMGS 482
           + G+LGHGD  +   P  +   +E    +V+         CG S+T+ LT  G + + G 
Sbjct: 345 EHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGM 404

Query: 483 PVYGQLG-DPKANGKLPTRVEGKLT--KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             +G LG   K     P  +  ++   + FV  ++ GD H A +TS+  VYTWG+G  G 
Sbjct: 405 SEFGALGLGEKRLAARPHLITSRIMDKRRFVH-LSAGDEHCAAVTSKGNVYTWGQGCFGA 463

Query: 540 LG------HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +G      + +  D   P  +E   DK+  +  CG ++T  +
Sbjct: 464 VGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVIL 505



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 149/334 (44%), Gaps = 51/334 (15%)

Query: 170 LSSAVSSSSQGSGHDDG-DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 228
           L + +   S G+ H    DS G +F WG C    +            G+K    VP    
Sbjct: 211 LGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRL------------GLKSGKDVPYPTR 258

Query: 229 SAVVLD--VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN 286
              + D  + ++ CG   +A ++   +VF+WG    G+LGH   SD   P+ + AL +I 
Sbjct: 259 VDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVAALHHIP 318

Query: 287 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI--HVSS 344
           +  VA G  H  A++L GD+YTWG      G LGHG+  S   PKKL   LE     V+ 
Sbjct: 319 IVQVALGYEHMAALSLDGDVYTWG--EGEHGQLGHGDLNSCSTPKKLLLELENTTGEVAD 376

Query: 345 V------SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS--LKGLRTVR 396
           V      +CG   T ++T  G+L +FG   FG LG G++   + P  + S  +   R V 
Sbjct: 377 VGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVH 436

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV----PTC--- 449
            + G  H AAV             S G ++TWG G  G +G   K AR      P C   
Sbjct: 437 LSAGDEHCAAVT------------SKGNVYTWGQGCFGAVG---KPARRAYSNPPDCRKP 481

Query: 450 --VAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
             +   ++   C  SCG + TV L+  G V  +G
Sbjct: 482 YKLELPLDKRACATSCGGNYTVILSKDGCVLVLG 515



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 8/158 (5%)

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVE--PNFCQVSCGHSLTVALTTTGHVYTMGS 482
           LF WG     +LG G  +A+  P  V+ L         VS G     A+ +TG ++T G 
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGL 239

Query: 483 PVYGQLGDPKANGK---LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
             +G+LG    +GK    PTRV+  L    + ++ CG Y  A ++   +V+TWG G+ G+
Sbjct: 240 CDHGRLG--LKSGKDVPYPTRVD-FLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQ 296

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           LGH +  D   P  V AL    +  +  G    AA+ L
Sbjct: 297 LGHVEKSDEWLPRSVAALHHIPIVQVALGYEHMAALSL 334



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 79/223 (35%), Gaps = 55/223 (24%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GDV+ WGE    G LG G   S S     +        E A V     +ACG     ++T
Sbjct: 336 GDVYTWGEGE-HGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILT 394

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA--LKNINVELVACGEHHTCAVTLSGDMY 307
             G + S+G    G LG G     + P LI +  +       ++ G+ H  AVT  G++Y
Sbjct: 395 DYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVY 454

Query: 308 TWGGSNCNFGLLG------HGNEMSLWLPKKLNGPLEG---------------------- 339
           TWG   C FG +G      + N      P KL  PL+                       
Sbjct: 455 TWG-QGC-FGAVGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSKDGCVL 512

Query: 340 ----------------------IHVSSVSCGPWHTAVVTSAGQ 360
                                 +  SSV CG +H+  + +  Q
Sbjct: 513 VLGDDSTEIRPMLYDESNPASVMKASSVLCGRYHSGAILNTLQ 555


>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
          Length = 488

 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 158/334 (47%), Gaps = 34/334 (10%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKL 278
           +F P  +E      V  ++    H+A V + G+V + G+      GH +D+   +  PKL
Sbjct: 153 AFTP--IEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGH-LDTSRPIFRPKL 209

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK-----KL 333
           ++ALK    + VA G H T  ++  G  YT G SN + G LGHG+ +   +PK     K 
Sbjct: 210 VEALKGTPCKQVAAGLHFTVFLSREGHAYTCG-SNTH-GQLGHGDTLDRPVPKVVEFLKT 267

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK--G 391
            GP     V  ++ GP +   +T  G +++FG G+   LGHG++     PR + + K  G
Sbjct: 268 IGP-----VVQIAAGPSYVLALTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKG 322

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
           +  +R + G  H  A+             S+G+++TWG G  G LGHGD+  ++ P  + 
Sbjct: 323 IHILRVSAGDEHAVALD------------SNGRVYTWGKGYCGALGHGDENDKITPQVLV 370

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKN 508
            L      QV      T  L   G +Y  G   +G LG P    ++  L  RV   L  +
Sbjct: 371 NLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPH 430

Query: 509 FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            V +++ G YH  V+T R  ++ +G     +LGH
Sbjct: 431 RVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGH 464



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 131/278 (47%), Gaps = 27/278 (9%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS---LWLPKKLNGPLEGIHVSSVS 346
           +A G++HT  +  S  +Y+ G S    G+L HG+E +    + P +   P +   V+ VS
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLS--GVLAHGSETTQCVAFTPIEFPFPAQ---VAQVS 169

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTA 405
               H+A V  +GQ+ T GD +    GH D    +  P+ V++LKG    + A G+  T 
Sbjct: 170 ATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTV 229

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSC 463
            +               G  +T G    G+LGHGD   R VP  V  L  + P   Q++ 
Sbjct: 230 FLSR------------EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGP-VVQIAA 276

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN--FVEEIACGDYHVA 521
           G S  +ALT  G VY+ GS     LG  +   +L  RV     +    +  ++ GD H  
Sbjct: 277 GPSYVLALTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAV 336

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD 559
            L S   VYTWGKG  G LGHGD +D+  P ++  L +
Sbjct: 337 ALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNN 374



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 130/286 (45%), Gaps = 20/286 (6%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F PK VE+      + +A G      ++++G  ++ G    G+LGHG   D   PK+++ 
Sbjct: 205 FRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEF 264

Query: 282 LKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEG 339
           LK I  V  +A G  +  A+T  G +Y++G S  NF  LGHG +     P+ +     +G
Sbjct: 265 LKTIGPVVQIAAGPSYVLALTQDGSVYSFG-SGSNF-CLGHGEQQDELQPRVIQAFKRKG 322

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           IH+  VS G  H   + S G+++T+G G  G LGHGD     TP+ + +L     V+   
Sbjct: 323 IHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCA 382

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK---EARLVPTCVAALVEP 456
               T  +VE             G L+ +G    G LG  D+   +  L P  +  L   
Sbjct: 383 RKRKTFVLVE------------GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPH 430

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRV 501
              QVS G   T+ +T  G ++  G     QLG     G L PT +
Sbjct: 431 RVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 143/343 (41%), Gaps = 25/343 (7%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAV 300
           G++  L+    +V+S G  L G L HG ++        I+      V  V+  ++H+  V
Sbjct: 119 GKYHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFV 178

Query: 301 TLSGDMYTWG--GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
             SG + T G   S+C     GH +        KL   L+G     V+ G   T  ++  
Sbjct: 179 LQSGQVLTCGDNSSHC----CGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSRE 234

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL-RTVRAACGVWHTAAVVEVMVGSSSS 417
           G  +T G  T G LGHGD +    P+ V+ LK +   V+ A G  +  A+ +        
Sbjct: 235 GHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQ-------- 286

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP--NFCQVSCGHSLTVALTTTG 475
                G ++++G G    LGHG+++  L P  + A      +  +VS G    VAL + G
Sbjct: 287 ----DGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNG 342

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VYT G    G LG    N K+  +V   L      ++        VL     +Y +G  
Sbjct: 343 RVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWM 402

Query: 536 ANGRLGHGD---TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G LG  D   +D    P ++E LK  +V  +  G   T  +
Sbjct: 403 GFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVV 445



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 105/226 (46%), Gaps = 20/226 (8%)

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS---VSTPREVDSLKGLRTVRAACGV 401
           ++ G +HT ++ ++ ++++ G    GVL HG   +     TP E      +  V A    
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQN- 173

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQ 460
            H+A V++            SG++ T GD      GH D    +  P  V AL      Q
Sbjct: 174 -HSAFVLQ------------SGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQ 220

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYH 519
           V+ G   TV L+  GH YT GS  +GQLG      + +P  VE   T   V +IA G  +
Sbjct: 221 VAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSY 280

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
           V  LT    VY++G G+N  LGHG+  D   P +++A K K +  +
Sbjct: 281 VLALTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHIL 326


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 180/410 (43%), Gaps = 59/410 (14%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           V  WG    DG LG G +    +A         + V +   L V  +  G R++  +   
Sbjct: 13  VLAWGSGE-DGQLGMGGYEEEDWA---------RGVAALDALAVSAVVAGSRNSLAICAD 62

Query: 252 GEVFSWGEELGGRLGHGVDSDV-SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           G +F+WG    G LGH  ++   S P  +DAL  +++   A G  H  AV   G  Y WG
Sbjct: 63  GRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWG 122

Query: 311 GSNCNFGLLGHGNEM----------SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           G+   +G  G   E            + +P++    L+   V  V+ G  H+ V+T  G 
Sbjct: 123 GNE--YGQCGEEAERKEDGTRALRRDIPIPQRCAPKLK---VRQVAAGGTHSVVLTQDGH 177

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           ++T+G         GD   +STP  V  L+ ++ +  A G +H  A+ E           
Sbjct: 178 VWTWGQ----PWPPGDIKQISTPVRVQGLENVKVI--AVGAFHNLALTE----------- 220

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
             G L+ WG+ + G+LG GD + R  P  V  L + +   ++ G   + ALT  G VY  
Sbjct: 221 -DGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAW 279

Query: 481 GSPVYGQL--GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
           G   +G+L  GD K++  +P +VE  L    + +++CG  H   LT    ++++G+G +G
Sbjct: 280 GRGEHGRLGFGDDKSSHMVPQKVE-LLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHG 338

Query: 539 RLGHGDTDDRNFPSLV------------EALKDKQVKSIVCGTSFTAAIC 576
           RLG+G       P  V            ++    Q + + CG   T AI 
Sbjct: 339 RLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 126/264 (47%), Gaps = 34/264 (12%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 282
           +P     A  L V+ +A GG H+ ++T+ G V++WG+        G    +S P  +  L
Sbjct: 147 IPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWP----PGDIKQISTPVRVQGL 202

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +N+ V  +A G  H  A+T  G ++ WG  N  +G LG G+      P ++ G L  + +
Sbjct: 203 ENVKV--IAVGAFHNLALTEDGILWAWG--NNEYGQLGTGDTQPRSQPIRVEG-LSDLSL 257

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGV 401
             ++ G WH+  +T  G+++ +G G  G LG GD + S   P++V+ L G   ++ +CG 
Sbjct: 258 VDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGG 317

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP----- 456
            H+ A+               G++F++G GD GRLG+G K     P  V   + P     
Sbjct: 318 THSVALTR------------DGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSG 365

Query: 457 -------NFCQVSCGHSLTVALTT 473
                      V+CG   T+A+ T
Sbjct: 366 GDSGGQWQARYVACGGRHTLAIAT 389



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 130/290 (44%), Gaps = 38/290 (13%)

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           A +L   +  WG G +   G+ G+  E   W   +    L+ + VS+V  G  ++  + +
Sbjct: 6   AFSLPTAVLAWGSGEDGQLGMGGY--EEEDW--ARGVAALDALAVSAVVAGSRNSLAICA 61

Query: 358 AGQLFTFGDGTFGVLGHGDRISV-STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            G+LFT+G    G LGH       S+P  VD+L G+  V+AA G WH  AV +       
Sbjct: 62  DGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDD------- 114

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE----PNFC-------QVSCGH 465
                 G+ + WG  + G+ G   +EA        AL      P  C       QV+ G 
Sbjct: 115 -----KGRAYAWGGNEYGQCG---EEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGG 166

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
           + +V LT  GHV+T G P     GD K     P RV+G      V+ IA G +H   LT 
Sbjct: 167 THSVVLTQDGHVWTWGQPW--PPGDIKQI-STPVRVQGL---ENVKVIAVGAFHNLALTE 220

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              ++ WG    G+LG GDT  R+ P  VE L D  +  I  G   + A+
Sbjct: 221 DGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTAL 270



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 21/123 (17%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+V+ WG          G H    +   K    VP+ VE     D+  ++CGG H+  +T
Sbjct: 274 GEVYAWGR---------GEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALT 324

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLI------------DALKNINVELVACGEHHT 297
           + G +FS+G    GRLG+G      HP  +            D+        VACG  HT
Sbjct: 325 RDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHT 384

Query: 298 CAV 300
            A+
Sbjct: 385 LAI 387


>gi|221484866|gb|EEE23156.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 725

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 220/550 (40%), Gaps = 169/550 (30%)

Query: 157 HLKG--LSGDTFRVSLSSAVSSSSQGSGHDDGDSLGD----VFIWGECTGDGILGGGIHR 210
           HL+G  L+G   R+S  +  S S  GSG+    S  D    ++ WG C  DG LG G   
Sbjct: 144 HLRGFGLAGRGERLSHLAVASCSEPGSGNKAKASSSDRSRILYSWG-CGIDGQLGLG--- 199

Query: 211 SGSYAGVKMDSFVPKAVESAVVLDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLGH 267
                G  +    P+ V ++ + D + I   A G  H+   T  G VF+WG     RLGH
Sbjct: 200 -----GSALSVSTPQPVPASALHDGEFILQCAAGAFHSVCCTSLGRVFTWGRGGKNRLGH 254

Query: 268 G---------------VDSDVSH--------------PKLIDALKNINV--ELVACGEHH 296
                             S   H              PK ++ L  ++   + VACGE H
Sbjct: 255 EWPRETPASASPGGRPYRSSTKHLSASGIAETAVQTLPKCVEGLCRLSARADAVACGEDH 314

Query: 297 TCAVTLSGDMYTWGGS---NCN-------------------------FGLL----GHGNE 324
           T  +T SG++Y+WGG+    C                          +G+L    G G+ 
Sbjct: 315 TLVLTDSGEVYSWGGNAHGECGRVETSESAEAVQAGDPARTKRRSWLWGVLRGDKGEGDI 374

Query: 325 MSL--------------WLPKK------LNGPLEGI----HVSSVSCGPWHTAVVTSAGQ 360
            +L              W  +       + G +EG      V+ ++CG   +A VT  G+
Sbjct: 375 DALATEEASSAHDANSPWAGRTEKEKGLVGGRVEGALRGKRVTQIACGKHVSAAVTEEGE 434

Query: 361 LFTFGDGTFGVLG-----------------------HGDRISVSTPREVDSLKGL----- 392
           L+ +G+G  G +G                        G   +V TPR ++ + GL     
Sbjct: 435 LYVWGEGRGGQVGPPVPAGRRSEDRRKEVSTSTFPSSGLSFNVPTPRRLE-VYGLAESEE 493

Query: 393 --------RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR 444
                   + V+ ACG  H AA+ E             G+++TWG  D G+LG G KE+R
Sbjct: 494 TSQDRTPKKVVQVACGSSHCAALTE------------DGEIYTWGSDDYGQLGLG-KESR 540

Query: 445 --LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVE 502
             L+P  V AL +     V CGH  T   T+TG V+  G    G+ G+ +++  LP  + 
Sbjct: 541 FVLLPRRVDALADKRVVSVRCGHFFTCCTTSTGEVFVWGYGRDGECGNGRSDAALPVLIS 600

Query: 503 -------GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-----RNF 550
                   K     V +   G  H+A  T    ++ WG+G  G+LG GD  +     R+ 
Sbjct: 601 LEAQPGGKKHASGTVLDTVAGGGHLAARTQEGGLWMWGRGREGQLGRGDAIESVAASRDS 660

Query: 551 PSLVEALKDK 560
           P LVE L ++
Sbjct: 661 PQLVEELWNR 670


>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
           magnipapillata]
          Length = 1020

 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 160/354 (45%), Gaps = 57/354 (16%)

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL-VACGEHHTCAVTLSGDMY 307
           T   EVF WG   GG+           P+ +D     +  + V+ G  H   VT+  ++Y
Sbjct: 458 TVTSEVFFWG---GGK---------HIPQKLDVFTGGSTAIEVSAGFCHFAVVTIEKELY 505

Query: 308 TW----GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           TW    GG+    G L HGN      PK+++    GI +    CG   T ++T +G +++
Sbjct: 506 TWANIQGGTEI-VGQLCHGNRAMYRTPKRVDF-FTGIPIKQAVCGEDFTIILTESGDVYS 563

Query: 364 FGDGTFGVLG----HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
            G   +G LG    +G   +V TP ++D+L  L+ V  ACG  H  A+  +         
Sbjct: 564 CGSDYYGCLGCEGIYGS--NVLTPIKIDALSKLKVVSIACGDCHVVALTNI--------- 612

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF-CQVSCGHSLTVALTTTGHVY 478
              G ++TWG+G+ GRLG G++    +P  V    + N+  +++CG   T  LT+ GH+ 
Sbjct: 613 ---GSVYTWGNGEHGRLGLGNQNDFNLPQLVTLPEKYNYIVKITCGRDNTFILTSNGHLL 669

Query: 479 TMGSPVYGQLG-----------DPKANGK------LPTRVEGKLTKNFVEEIACGDYHVA 521
             G+    +L            D  +  +      LPT V    +   V  +A G  H A
Sbjct: 670 AFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRSYRIVS-MASGKSHSA 728

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD-KQVKSIVCGTSFTAA 574
           V+     + T+G    G LG GD   RNFPSLV  L + K+V    CG +FT  
Sbjct: 729 VVDEFGRLLTFGSNTFGELGLGDYQSRNFPSLVSGLLNGKEVTICNCGDNFTVV 782



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 141/293 (48%), Gaps = 37/293 (12%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGV-DSDVSHPKLIDA 281
           PK V+    + ++   CG     ++T+ G+V+S G +  G LG  G+  S+V  P  IDA
Sbjct: 531 PKRVDFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNVLTPIKIDA 590

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L  + V  +ACG+ H  A+T  G +YTWG  N   G LG GN+    LP+ +  P +  +
Sbjct: 591 LSKLKVVSIACGDCHVVALTNIGSVYTWG--NGEHGRLGLGNQNDFNLPQLVTLPEKYNY 648

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDG---------TFGVLGHGDRIS-------VSTPRE 385
           +  ++CG  +T ++TS G L  FG+          T    G+ D+ S       V+ P  
Sbjct: 649 IVKITCGRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTP 708

Query: 386 VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
           V  L+  R V  A G  H+A V E             G+L T+G    G LG GD ++R 
Sbjct: 709 VRPLRSYRIVSMASGKSHSAVVDEF------------GRLLTFGSNTFGELGLGDYQSRN 756

Query: 446 VPTCVAALV---EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 495
            P+ V+ L+   E   C  +CG + TV  T    +++ G    G+LG   +NG
Sbjct: 757 FPSLVSGLLNGKEVTIC--NCGDNFTVVATADNQIFSWGCGENGRLGLNLSNG 807



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 169/380 (44%), Gaps = 69/380 (18%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFV--PKAVESAVVLDVQNIACGGRHAALV 248
           +VF WG               G +   K+D F     A+E         ++ G  H A+V
Sbjct: 462 EVFFWG--------------GGKHIPQKLDVFTGGSTAIE---------VSAGFCHFAVV 498

Query: 249 TKQGEVFSW-----GEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
           T + E+++W     G E+ G+L HG  +    PK +D    I ++   CGE  T  +T S
Sbjct: 499 TIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQAVCGEDFTIILTES 558

Query: 304 GDMYTWGGSNCNFGLLG----HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
           GD+Y+ G     +G LG    +G+  ++  P K++  L  + V S++CG  H   +T+ G
Sbjct: 559 GDVYSCGSD--YYGCLGCEGIYGS--NVLTPIKIDA-LSKLKVVSIACGDCHVVALTNIG 613

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVD-SLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            ++T+G+G  G LG G++   + P+ V    K    V+  CG  +T  +           
Sbjct: 614 SVYTWGNGEHGRLGLGNQNDFNLPQLVTLPEKYNYIVKITCGRDNTFILT---------- 663

Query: 419 NCSSGKLFTWGDGDRGRL---------GHGDKEAR-------LVPTCVAALVEPNFCQVS 462
             S+G L  +G+ +  +L         G+ DK +         +PT V  L       ++
Sbjct: 664 --SNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRSYRIVSMA 721

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVA 521
            G S +  +   G + T GS  +G+LG      +  P+ V G L    V    CGD    
Sbjct: 722 SGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSRNFPSLVSGLLNGKEVTICNCGDNFTV 781

Query: 522 VLTSRTEVYTWGKGANGRLG 541
           V T+  ++++WG G NGRLG
Sbjct: 782 VATADNQIFSWGCGENGRLG 801



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 99/221 (44%), Gaps = 32/221 (14%)

Query: 379 SVSTPREVDSLKG-------LRTVRAACGVW----HTAAVVEVMVGSSSSSNCSSG---- 423
           S+S P  + +  G       + TV +    W    H    ++V  G S++   S+G    
Sbjct: 436 SLSIPDSISTKSGTNLMLPRVSTVTSEVFFWGGGKHIPQKLDVFTGGSTAIEVSAGFCHF 495

Query: 424 -------KLFTW-----GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                  +L+TW     G    G+L HG++     P  V         Q  CG   T+ L
Sbjct: 496 AVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQAVCGEDFTIIL 555

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGK---LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           T +G VY+ GS  YG LG     G     P +++  L+K  V  IACGD HV  LT+   
Sbjct: 556 TESGDVYSCGSDYYGCLGCEGIYGSNVLTPIKIDA-LSKLKVVSIACGDCHVVALTNIGS 614

Query: 529 VYTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCG 568
           VYTWG G +GRLG G+ +D N P LV    K   +  I CG
Sbjct: 615 VYTWGNGEHGRLGLGNQNDFNLPQLVTLPEKYNYIVKITCG 655


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 148/299 (49%), Gaps = 21/299 (7%)

Query: 241 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH-HTCA 299
            G     VT+  EVF+ G    G LG G   +   P+ +D L    +  ++ G   H   
Sbjct: 30  AGNEVLYVTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVV 89

Query: 300 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 359
            T  G++YTWG +   +  LG+G   +  LP +++  L    V+ V+CG  H+ ++TS G
Sbjct: 90  ATAEGEVYTWGHNA--YSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDG 147

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
           +++T+G    G +G G   + + PR V S L+    V  ACG   + AVVE         
Sbjct: 148 EVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVE--------- 198

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
              +G+++ WG    G+LG G+   +  P  +AAL      +V+CG++ T+ LT  G +Y
Sbjct: 199 ---NGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMY 255

Query: 479 TMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEI-ACGDYHV-AVLTSRTEVYTWGK 534
             G+  YGQLG   ++N   P  +   + K+ V EI AC   H  A  T  ++VY WG+
Sbjct: 256 AWGANSYGQLGTGNRSNQSYPVPI--TVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQ 312



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 133/268 (49%), Gaps = 19/268 (7%)

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW-HTAVVTSAGQLFTFGDGTF 369
           G+NC+ G LG G+  +   P++L+  L G  ++ +S G   H  V T+ G+++T+G   +
Sbjct: 47  GTNCS-GCLGVGDTQNSVEPRRLD-TLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAY 104

Query: 370 GVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
             LG+G   +   P ++ + L   +    ACG  H+  +             S G+++TW
Sbjct: 105 SQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILT------------SDGEVYTW 152

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNF-CQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           G  + G++G G    + +P  V + ++      ++CG   ++A+   G VY  G    GQ
Sbjct: 153 GYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQ 212

Query: 488 LG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LG     N   P R+   L    V+ +ACG  H  VLT   ++Y WG  + G+LG G+  
Sbjct: 213 LGLGNSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRS 271

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           ++++P  +   KD+ ++   C ++ T+A
Sbjct: 272 NQSYPVPITVDKDRVIEIAACHSAHTSA 299



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 13/223 (5%)

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           VT   ++F  G    G LG GD  +   PR +D+L G +    + G     +   V+V +
Sbjct: 37  VTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYG-----SGPHVVVAT 91

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA-LVEPNFCQVSCGHSLTVALTT 473
           +       G+++TWG     +LG+G     L+P  ++  LV     +V+CG   ++ LT+
Sbjct: 92  AE------GEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTS 145

Query: 474 TGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            G VYT G    GQ+G    AN  +P RV   L       IACG      +    EVY W
Sbjct: 146 DGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVW 205

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G   NG+LG G++ ++  P  + AL+  +V+ + CG + T  +
Sbjct: 206 GYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 248



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 87/177 (49%), Gaps = 13/177 (7%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+V+ WG     G +G     SGS A   +   V   +++ + +   NIACG   +  V 
Sbjct: 147 GEVYTWGY-NNSGQVG-----SGSTANQAIPRRVTSCLQNKIAV---NIACGQMCSMAVV 197

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           + GEV+ WG    G+LG G   +   P  I AL+ I V+ VACG  HT  +T  G MY W
Sbjct: 198 ENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAW 257

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG-QLFTFG 365
           G +  ++G LG GN  +   P  +    + + +   +C   HT+   + G Q++ +G
Sbjct: 258 GAN--SYGQLGTGNRSNQSYPVPITVDKDRV-IEIAACHSAHTSAAKTQGSQVYMWG 311


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 166/347 (47%), Gaps = 33/347 (9%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           ACG RH+ L+   G V+S G    G+LG         P  I AL+  ++  V+CG+ H+ 
Sbjct: 43  ACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSL 102

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           A+   G +++WG GS+   G+       S  +PKK++  L    +  VSCG +H+  +  
Sbjct: 103 AICKEGRVFSWGSGSDGQLGIREFKKLSS--IPKKID-ELSSFKIIQVSCGHYHSIALAQ 159

Query: 358 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
            G++F++G    G LG G+ + S ++P+ V SL G+   + A G  H+ A+         
Sbjct: 160 DGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFAL--------- 210

Query: 417 SSNCSSGKLFTWGDGDRGRLG-HGDKE-ARLV--PTCVAALVEPNFCQVSCGHSLTVALT 472
                SG  + WG  + G+L   G KE A  +  P  +  L       +SCG   T  LT
Sbjct: 211 ---SFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLT 267

Query: 473 TTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT-EVY 530
             G V+T GS   GQLG    +G K P  V+  ++     +IACG YH    +  T +V 
Sbjct: 268 QDGKVFTFGSNDSGQLGRQLISGMKGPQVVDSAVS---FSQIACGSYHTLAYSCTTGQVI 324

Query: 531 TWGKGAN----GRLGHGD-TDDRNFPSLVEA--LKDKQVKSIVCGTS 570
           ++G G+     G L  GD   + N  +L+ +    D QVK I  G +
Sbjct: 325 SFGCGSQRDPIGPLQPGDAVQNFNISNLISSNDFTDFQVKDIFAGAN 371



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 150/301 (49%), Gaps = 25/301 (8%)

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
           +L N  +   ACGE H+  +   G +++ G ++C  G LG         P ++   LE  
Sbjct: 33  SLGNQTLLQAACGERHSLLLLSDGTVWSCGNNSC--GQLGRKRCQKHGRPAQIQA-LETQ 89

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST-PREVDSLKGLRTVRAAC 399
            + SVSCG  H+  +   G++F++G G+ G LG  +   +S+ P+++D L   + ++ +C
Sbjct: 90  DIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSC 149

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNF 458
           G +H+ A+ +             G++F+WG  + G+LG G+   ++  P  V +L     
Sbjct: 150 GHYHSIALAQ------------DGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPL 197

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQL---GDPKANGKL--PTRVEGKLTKNFVEEI 513
            QV+ G + + AL+ +G  Y  G    GQL   G  ++  ++  P  + G+L +  V  I
Sbjct: 198 AQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSI-GELKRLQVTYI 256

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           +CGD H AVLT   +V+T+G   +G+LG         P +V++        I CG+  T 
Sbjct: 257 SCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGPQVVDSAVS--FSQIACGSYHTL 314

Query: 574 A 574
           A
Sbjct: 315 A 315



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 130/264 (49%), Gaps = 22/264 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDAL 282
           P  +++    D+ +++CG  H+  + K+G VFSWG    G+LG      +S  PK ID L
Sbjct: 80  PAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDEL 139

Query: 283 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
            +  +  V+CG +H+ A+   G +++WG +  N G LG G  +      +    L+GI +
Sbjct: 140 SSFKIIQVSCGHYHSIALAQDGRVFSWGKN--NHGQLGLGENVPSQASPQWVKSLDGIPL 197

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRIS---VSTPREVDSLKGLRTVRAA 398
           + V+ G  H+  ++ +G  + +G    G L   G + S   +S P  +  LK L+    +
Sbjct: 198 AQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYIS 257

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
           CG  HTA + +             GK+FT+G  D G+LG         P  V + V  +F
Sbjct: 258 CGDEHTAVLTQ------------DGKVFTFGSNDSGQLGRQLISGMKGPQVVDSAV--SF 303

Query: 459 CQVSCGHSLTVALT-TTGHVYTMG 481
            Q++CG   T+A + TTG V + G
Sbjct: 304 SQIACGSYHTLAYSCTTGQVISFG 327



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 124/258 (48%), Gaps = 30/258 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG    DG LG            K  S +PK ++      +  ++CG  H+  + 
Sbjct: 108 GRVFSWGS-GSDGQLG--------IREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALA 158

Query: 250 KQGEVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           + G VFSWG+   G+LG G  V S  S P+ + +L  I +  VA G  H+ A++ SG  Y
Sbjct: 159 QDGRVFSWGKNNHGQLGLGENVPSQAS-PQWVKSLDGIPLAQVAAGGAHSFALSFSGTSY 217

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
            WG +N     L    E +  + K  + G L+ + V+ +SCG  HTAV+T  G++FTFG 
Sbjct: 218 GWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGS 277

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
              G LG      +  P+ VDS      +  ACG +HT A            +C++G++ 
Sbjct: 278 NDSGQLGRQLISGMKGPQVVDSAVSFSQI--ACGSYHTLAY-----------SCTTGQVI 324

Query: 427 TWGDGDR----GRLGHGD 440
           ++G G +    G L  GD
Sbjct: 325 SFGCGSQRDPIGPLQPGD 342



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 11/158 (6%)

Query: 426 FTWGDGDRGRLGHG---DKEARLVPTCV--AALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
           + WGD   G+LG       +AR V  C   A+L      Q +CG   ++ L + G V++ 
Sbjct: 3   YCWGDNSSGQLGIPAVPRAKARAV-RCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSC 61

Query: 481 GSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
           G+   GQLG  +   +G+ P +++   T++ V  ++CG  H   +     V++WG G++G
Sbjct: 62  GNNSCGQLGRKRCQKHGR-PAQIQALETQDIV-SVSCGKEHSLAICKEGRVFSWGSGSDG 119

Query: 539 RLGHGDTDD-RNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG  +     + P  ++ L   ++  + CG   + A+
Sbjct: 120 QLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIAL 157



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 8/116 (6%)

Query: 478 YTMGSPVYGQLGDP---KANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           Y  G    GQLG P   +A  + +  R    L    + + ACG+ H  +L S   V++ G
Sbjct: 3   YCWGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCG 62

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVD 585
             + G+LG         P+ ++AL+ + + S+ CG   + AIC    +  W SG D
Sbjct: 63  NNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSD 118


>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
 gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
          Length = 594

 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 155/300 (51%), Gaps = 27/300 (9%)

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL--VACGEHHTCAVTLS-GDM 306
           + G V+SWG    G+ G+G +  +  P  +    +I + +  +ACG+ HT A+  +   +
Sbjct: 69  EDGLVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAENPYGL 128

Query: 307 YTWGGSNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           Y+WG   CN +G LG G++++   P ++N       V+ ++CG  H+ +V++ G+L+TFG
Sbjct: 129 YSWG---CNRWGQLGLGDQINRNQPTRINHSDRATFVA-IACGSQHSMIVSNFGELYTFG 184

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            GT G LG GD      P  V SL G + V    GV H++ V             S+GK+
Sbjct: 185 CGTTGRLGLGDESPRFKPTVVSSLVGKQIVSCGAGVMHSSCVD------------STGKI 232

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCV---AALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           +++G    G+LG G  ++  +P  +       + +F +V CG + T+AL+  G + + G 
Sbjct: 233 YSFGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGF 292

Query: 483 PVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
              GQLG      ++ PT++E       V +IA G YH   +T   E Y+WG  ++G LG
Sbjct: 293 NACGQLGVGSHLDQINPTKIE---FSEKVLDIATGYYHSLCVTDNGEAYSWGYMSDGGLG 349



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 142/281 (50%), Gaps = 27/281 (9%)

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE-GIHVSSVSCGPWHT-AVVTSAGQL 361
           G +Y+WG +   FG  G+G   ++ +P  +   ++  I + +++CG  HT A+  +   L
Sbjct: 71  GLVYSWGYNY--FGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAENPYGL 128

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +++G   +G LG GD+I+ + P  ++       V  ACG  H+  V             +
Sbjct: 129 YSWGCNRWGQLGLGDQINRNQPTRINHSDRATFVAIACGSQHSMIV------------SN 176

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL--TVALTTTGHVYT 479
            G+L+T+G G  GRLG GD+  R  PT V++LV      VSCG  +  +  + +TG +Y+
Sbjct: 177 FGELYTFGCGTTGRLGLGDESPRFKPTVVSSLVGKQI--VSCGAGVMHSSCVDSTGKIYS 234

Query: 480 MGSPVYGQLGDPKANGK-LPTRV-EGKLT-KNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
            G   YGQLG        LP ++ E ++T K    ++ CG  H   L++  E+ ++G  A
Sbjct: 235 FGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNA 294

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            G+LG G   D+  P+ +E  +    K +   T +  ++C+
Sbjct: 295 CGQLGVGSHLDQINPTKIEFSE----KVLDIATGYYHSLCV 331



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 158/331 (47%), Gaps = 44/331 (13%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE--H 295
           IACG +H+ +V+  GE++++G    GRLG G +S    P ++ +L  +  ++V+CG    
Sbjct: 164 IACGSQHSMIVSNFGELYTFGCGTTGRLGLGDESPRFKPTVVSSL--VGKQIVSCGAGVM 221

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP--LEGIHVSSVSCGPWHTA 353
           H+  V  +G +Y++G +   +G LG G+  S  LP K+        +H   V CG  HT 
Sbjct: 222 HSSCVDSTGKIYSFGWN--RYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTL 279

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
            +++ G++ +FG    G LG G  +    P +++  +  + +  A G +H+  V +    
Sbjct: 280 ALSNNGEMVSFGFNACGQLGVGSHLDQINPTKIEFSE--KVLDIATGYYHSLCVTD---- 333

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGD-----KEARLVPTCVAALVEPNFCQVSCGHSLT 468
                   +G+ ++WG    G LG  +      + +L+P             V   H+ +
Sbjct: 334 --------NGEAYSWGYMSDGGLGLSEVYTHQTKPKLIPL------------VHIRHTFS 373

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKL-TKNFVEEIACGDYHVAVLTSRT 527
            +      +Y  G        +   N K    ++ K  T +FVE++  G ++ A++TS  
Sbjct: 374 DSNDAFDEIYGKGDE--NTTEETIENHK--KYIQDKYSTGDFVEKVGAGAWNSAIITSSG 429

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALK 558
           ++YT+G G   R G+ + +D++ P ++E  K
Sbjct: 430 KLYTFGYGDTFRTGNHEENDQDIPIIIEQDK 460



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 8/167 (4%)

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC--QVSCGHSLTVALT 472
           SS+SN   G +++WG    G+ G+G  +  +VP+ V   ++       ++CG S T+A+ 
Sbjct: 64  SSNSN-EDGLVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIA 122

Query: 473 TTGH-VYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
              + +Y+ G   +GQLG   + N   PTR+       FV  IACG  H  ++++  E+Y
Sbjct: 123 ENPYGLYSWGCNRWGQLGLGDQINRNQPTRINHSDRATFV-AIACGSQHSMIVSNFGELY 181

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           T+G G  GRLG GD   R  P++V +L  KQ+ S  CG     + C+
Sbjct: 182 TFGCGTTGRLGLGDESPRFKPTVVSSLVGKQIVS--CGAGVMHSSCV 226


>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 903

 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 153/312 (49%), Gaps = 26/312 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I  G   A ++T  G V+SWG    G+LGH   +D+S P +I A KN  +  +ACG+ H+
Sbjct: 213 IKFGQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDHS 272

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+   G +Y WG  N + G LG GN   + +PK +    E   ++S++CG   +  ++ 
Sbjct: 273 LALDEIGVVYAWG--NGSGGRLGLGNSEVVSIPKIIPH-FEDEKITSIACGQEFSLALSD 329

Query: 358 AGQLFTFGDGTFGVLGH--GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
           +G++F++G G  G LG+     +S STP+ +  L     +  +CG WH+  + +      
Sbjct: 330 SGKVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLPPASQI--SCGNWHSMVLSK------ 381

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                 SG ++T+G     RLGH    +   PT V   +     ++  G +    L+ + 
Sbjct: 382 ------SGDVYTFGSNIDCRLGHSGNGS--TPTMVQ--IGSKIKKIGAGANFNAVLSESN 431

Query: 476 HVYTMGSPVYGQLGDPKANGKLPT---RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            +YT GS ++ QLG    + +  T   +V   L    +  I  G  HV VLT   EV+T+
Sbjct: 432 AIYTWGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTDTGEVFTF 491

Query: 533 GKGANGRLGHGD 544
           G  +  + G G+
Sbjct: 492 GDNSMMQCGVGE 503



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 28/285 (9%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           +  G++    +T +G +Y+WG   C++G LGH  +  + +P  ++   +   ++ ++CG 
Sbjct: 213 IKFGQNFAVMLTDTGGVYSWGL--CSYGKLGHPTKNDISIPSMISA-FKNKQITQIACGK 269

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            H+  +   G ++ +G+G+ G LG G+   VS P+ +   +  +    ACG   + A+ +
Sbjct: 270 DHSLALDEIGVVYAWGNGSGGRLGLGNSEVVSIPKIIPHFEDEKITSIACGQEFSLALSD 329

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL---VPTCVAALVEPNFCQVSCGHS 466
                       SGK+F+WG G  G LG+ D    L    P  +  L  P   Q+SCG+ 
Sbjct: 330 ------------SGKVFSWGKGLHGNLGY-DVSTMLSQSTPKVIPML--PPASQISCGNW 374

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            ++ L+ +G VYT GS +  +LG    NG  PT V+     + +++I  G    AVL+  
Sbjct: 375 HSMVLSKSGDVYTFGSNIDCRLGH-SGNGSTPTMVQ---IGSKIKKIGAGANFNAVLSES 430

Query: 527 TEVYTWGKGANGRLGHGDTDDRNF---PSLVEALKDKQVKSIVCG 568
             +YTWG   + +LG    D RN+   P +V+ L    + +I  G
Sbjct: 431 NAIYTWGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPYPISTIEVG 475



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 137/294 (46%), Gaps = 47/294 (15%)

Query: 306 MYTWGGSNC-NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           +Y WG   C +  L+  G    +   +K + P      +++  G     ++T  G ++++
Sbjct: 179 IYQWGQMLCPSLSLIATGTPTGVLFNQKEHSP------TTIKFGQNFAVMLTDTGGVYSW 232

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G  ++G LGH  +  +S P  + + K  +  + ACG  H+ A+ E+            G 
Sbjct: 233 GLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDHSLALDEI------------GV 280

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           ++ WG+G  GRLG G+ E   +P  +    +     ++CG   ++AL+ +G V++ G  +
Sbjct: 281 VYAWGNGSGGRLGLGNSEVVSIPKIIPHFEDEKITSIACGQEFSLALSDSGKVFSWGKGL 340

Query: 485 YGQLG----------DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
           +G LG           PK    LP             +I+CG++H  VL+   +VYT+G 
Sbjct: 341 HGNLGYDVSTMLSQSTPKVIPMLPP----------ASQISCGNWHSMVLSKSGDVYTFGS 390

Query: 535 GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSGV 584
             + RLGH  + + + P++V+     ++K I  G +F A +     ++ W S +
Sbjct: 391 NIDCRLGH--SGNGSTPTMVQI--GSKIKKIGAGANFNAVLSESNAIYTWGSNI 440



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 149/333 (44%), Gaps = 37/333 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG C+  G LG   H +      K D  +P  + +     +  IACG  H+  + 
Sbjct: 227 GGVYSWGLCSY-GKLG---HPT------KNDISIPSMISAFKNKQITQIACGKDHSLALD 276

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           + G V++WG   GGRLG G    VS PK+I   ++  +  +ACG+  + A++ SG +++W
Sbjct: 277 EIGVVYAWGNGSGGRLGLGNSEVVSIPKIIPHFEDEKITSIACGQEFSLALSDSGKVFSW 336

Query: 310 GGSNCNFGLLGH-GNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           G      GL G+ G ++S  L +     +  +   S +SCG WH+ V++ +G ++TFG  
Sbjct: 337 GK-----GLHGNLGYDVSTMLSQSTPKVIPMLPPASQISCGNWHSMVLSKSGDVYTFGSN 391

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
               LGH    S  T  ++    G +  +   G    A + E            S  ++T
Sbjct: 392 IDCRLGHSGNGSTPTMVQI----GSKIKKIGAGANFNAVLSE------------SNAIYT 435

Query: 428 WGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           WG     +LG    + R     P  V  L+      +  G+   V LT TG V+T G   
Sbjct: 436 WGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTDTGEVFTFGDNS 495

Query: 485 YGQLGDPKANGKLPTRVEGKLTKN-FVEEIACG 516
             Q G  +A  ++      K+  N  V +IA G
Sbjct: 496 MMQCGVGEAIKEVCNFTRVKIPDNSTVFKIAAG 528


>gi|428185814|gb|EKX54666.1| hypothetical protein GUITHDRAFT_40316, partial [Guillardia theta
           CCMP2712]
          Length = 272

 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 146/297 (49%), Gaps = 33/297 (11%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALK--NINVELVACGEHHTCAVTLSGDMYTWG 310
           ++ +WG+   G+LG  V   + +  L D  +  ++ VE +ACG  H+  ++  G ++TWG
Sbjct: 1   KLVAWGDNDFGQLG--VSEQMMNHSLTDVQQTFDLRVEDMACGSAHSVILS-DGKVFTWG 57

Query: 311 GSNCNFGLLGHGNE---MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            +    G LGHG      SL    K +G         V+ G   +  +T  G++F FG+G
Sbjct: 58  QNK--HGQLGHGPSDYLGSLGPTAKTDGK-----CVQVAAGYNFSMALTDRGEIFVFGEG 110

Query: 368 TFGVLGHGDRISVSTPREVDSLK--GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
             GVL  GD +S S+P+ +DSL   G    +  CG  H A +V              G+ 
Sbjct: 111 RHGVLAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIVRY------------GQA 158

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            TWG G  G+LGH  ++    P  V  L   +   +SCG   T  LT+   +YT G+   
Sbjct: 159 LTWGCGSDGQLGHSSRDDEHFPRKVEHLANVSVRTISCGSKHTCFLTSDNSLYTCGNGKD 218

Query: 486 GQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
           G+LG       L P +VE   T   V+E++CGDYH A +  ++ +YT+G G  G+LG
Sbjct: 219 GKLGHGDERSYLYPKKVE---TLQAVKEVSCGDYHTACIDGKSIIYTFGSGTRGQLG 272



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 130/269 (48%), Gaps = 36/269 (13%)

Query: 174 VSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVL 233
           V   + GS H    S G VF WG+    G LG   H    Y G    S  P A      +
Sbjct: 35  VEDMACGSAHSVILSDGKVFTWGQ-NKHGQLG---HGPSDYLG----SLGPTAKTDGKCV 86

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK--NINVELVA 291
            V   A G   +  +T +GE+F +GE   G L  G +   S P++ID+L      V+ + 
Sbjct: 87  QV---AAGYNFSMALTDRGEIFVFGEGRHGVLAQGDELSKSSPQVIDSLSVPGYVVDKIF 143

Query: 292 CGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
           CGE H   +   G   TWG GS+   G LGH +      P+K+   L  + V ++SCG  
Sbjct: 144 CGERHCACIVRYGQALTWGCGSD---GQLGHSSRDDEHFPRKVE-HLANVSVRTISCGSK 199

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           HT  +TS   L+T G+G  G LGHGD  S   P++V++L+ ++ V  +CG +HTA     
Sbjct: 200 HTCFLTSDNSLYTCGNGKDGKLGHGDERSYLYPKKVETLQAVKEV--SCGDYHTA----- 252

Query: 411 MVGSSSSSNCSSGK--LFTWGDGDRGRLG 437
                    C  GK  ++T+G G RG+LG
Sbjct: 253 ---------CIDGKSIIYTFGSGTRGQLG 272



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 20/220 (9%)

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
           +L  +GD  FG LG  +++   +  +V     LR    ACG  H+  +            
Sbjct: 1   KLVAWGDNDFGQLGVSEQMMNHSLTDVQQTFDLRVEDMACGSAHSVIL------------ 48

Query: 420 CSSGKLFTWGDGDRGRLGHG--DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
            S GK+FTWG    G+LGHG  D    L PT   A  +    QV+ G++ ++ALT  G +
Sbjct: 49  -SDGKVFTWGQNKHGQLGHGPSDYLGSLGPT---AKTDGKCVQVAAGYNFSMALTDRGEI 104

Query: 478 YTMGSPVYGQLGDPKANGKLPTRVEGKLT--KNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
           +  G   +G L       K   +V   L+     V++I CG+ H A +    +  TWG G
Sbjct: 105 FVFGEGRHGVLAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIVRYGQALTWGCG 164

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           ++G+LGH   DD +FP  VE L +  V++I CG+  T  +
Sbjct: 165 SDGQLGHSSRDDEHFPRKVEHLANVSVRTISCGSKHTCFL 204


>gi|42573750|ref|NP_974971.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332010006|gb|AED97389.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 383

 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 144/312 (46%), Gaps = 24/312 (7%)

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P  IDA  +     ++CG  H+  +T+ GD++ WG  +   G LG G E S+++P  LN 
Sbjct: 23  PGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKGDG--GRLGFGQENSVFVPN-LNP 78

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
             E   +  ++ G  H+  +T  G +FT+G G FG LGH        PR VD     +  
Sbjct: 79  LFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKIS 138

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG--DGDRGRLGH-----GDKEARLVPT 448
             A    HTAA+ E            SG+L+ WG  +GD            +     VP+
Sbjct: 139 AIATSGTHTAAITE------------SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPS 186

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN 508
            V AL  P    VSCG   T+ALT  G ++  G+    +LG     G         L   
Sbjct: 187 KVKALTVP-VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGV 245

Query: 509 FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 568
            + +IACG YH   LT   +V +WG G +G+LG     ++  P+ +EAL DK++  I  G
Sbjct: 246 RITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASG 305

Query: 569 TSFTAAICLHKW 580
            S +AAI    W
Sbjct: 306 GSSSAAITGWDW 317



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 162/363 (44%), Gaps = 55/363 (15%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           GD++IWG+  G G LG G   S          FVP          ++ IA GG H+  +T
Sbjct: 50  GDLWIWGKGDG-GRLGFGQENS---------VFVPNLNPLFEEHSIRCIALGGLHSVALT 99

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            QG+VF+WG    G LGH V +    P+ +D   +  +  +A    HT A+T SG++Y W
Sbjct: 100 HQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMW 159

Query: 310 GGSNCN-------FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 362
           G    +             G  +S  +P K+      + V+SVSCG + T  +T  GQL+
Sbjct: 160 GREEGDGRLGLGPGRGPNEGGGLS--VPSKVKALT--VPVASVSCGGFFTMALTKEGQLW 215

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
            +G  +   LG GD +    P  V SL+G+R  + ACG +H+ A+ E             
Sbjct: 216 NWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE------------E 263

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA-------LTTTG 475
           GK+ +WG G  G+LG      + VPT + AL +     ++ G S + A       LT  G
Sbjct: 264 GKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGG 323

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE-----------IACGDYHVAVLT 524
            ++  G+    QLG P     LP      +  NF+ E           I+ G  H   L 
Sbjct: 324 ELWMWGNAKDFQLGVP----GLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLV 379

Query: 525 SRT 527
           SR+
Sbjct: 380 SRS 382



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 167/361 (46%), Gaps = 40/361 (11%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+CG  H+ L T  G+++ WG+  GGRLG G ++ V  P L    +  ++  +A G  H+
Sbjct: 37  ISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 95

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
            A+T  GD++TWG     FG LGH       +P++++   +   +S+++    HTA +T 
Sbjct: 96  VALTHQGDVFTWG--YGGFGALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITE 152

Query: 358 AGQLFTFG-------DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           +G+L+ +G        G     G  +   +S P +V +L  +     +CG + T A+ + 
Sbjct: 153 SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK- 210

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA 470
                       G+L+ WG      LG GD      P  V +L      Q++CG   ++A
Sbjct: 211 -----------EGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLA 259

Query: 471 LTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAV------L 523
           LT  G V + G   +GQLG     N K+PT +E    K  V   + G    A+      L
Sbjct: 260 LTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFL 319

Query: 524 TSRTEVYTWGKGANGRLG-HGDTDDRNFPSLVEALKDK------QVKSIVCGTSFTAAIC 576
           T   E++ WG   + +LG  G  + +  P  V  L ++      +V SI  G S   A+C
Sbjct: 320 TDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASH--ALC 377

Query: 577 L 577
           L
Sbjct: 378 L 378



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 23/202 (11%)

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
           TP  +D+      +  +CG++H+   ++             G L+ WG GD GRLG G +
Sbjct: 22  TPGRIDADSSSFRIGISCGLFHSGLTID-------------GDLWIWGKGDGGRLGFGQE 68

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTR 500
            +  VP       E +   ++ G   +VALT  G V+T G   +G LG      +L P R
Sbjct: 69  NSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRR 128

Query: 501 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK-------GANGRLGHGDTDDRNFPSL 553
           V+       +  IA    H A +T   E+Y WG+       G     G  +    + PS 
Sbjct: 129 VDDSWDCK-ISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSK 187

Query: 554 VEALKDKQVKSIVCGTSFTAAI 575
           V+AL    V S+ CG  FT A+
Sbjct: 188 VKALT-VPVASVSCGGFFTMAL 208


>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
 gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
          Length = 467

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 102/176 (57%), Gaps = 4/176 (2%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ IACGGRH+A+VT  G + ++G  L G+ GHG  +D   P  + +L  I +E +A G 
Sbjct: 290 VKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGSTNDQLRPTSLPSLSGIQIERIAAGL 349

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTA 353
            HT  +T+ G +Y +GG+   FG LG G      LP+ L  P LE   V  VSCG  H+A
Sbjct: 350 WHTMCITIDGRVYVFGGN--QFGQLGTGASQGETLPRLLEDPCLESKLVKMVSCGARHSA 407

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           ++   GQ+F++G   +G LG GD I  +TP +V  ++G R    ACG WHT  + E
Sbjct: 408 ILLEDGQVFSWGWNKYGQLGVGDSIDRNTPTQV-PIEGCRPKMVACGWWHTLLLAE 462



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 43/260 (16%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-------------------- 378
           G+ ++SV+ G  HT  ++  GQ++ +G G  G LG G R+                    
Sbjct: 207 GVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRVKMVSSPHLIPFTEQPTTGKH 266

Query: 379 --------SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
                   S + P +V +  G      ACG  H+A V +            +G L T+G 
Sbjct: 267 RSSVVHNGSTNLPAQVSNFPGSYVKEIACGGRHSAVVTD------------AGTLLTFGW 314

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
           G  G+ GHG    +L PT + +L      +++ G   T+ +T  G VY  G   +GQLG 
Sbjct: 315 GLYGQCGHGSTNDQLRPTSLPSLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQLGT 374

Query: 491 PKANGK-LPTRVEGK-LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
             + G+ LP  +E   L    V+ ++CG  H A+L    +V++WG    G+LG GD+ DR
Sbjct: 375 GASQGETLPRLLEDPCLESKLVKMVSCGARHSAILLEDGQVFSWGWNKYGQLGVGDSIDR 434

Query: 549 NFPSLVEALKDKQVKSIVCG 568
           N P+ V  ++  + K + CG
Sbjct: 435 NTPTQV-PIEGCRPKMVACG 453



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 133/309 (43%), Gaps = 50/309 (16%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLI 279
           +  P  V     + + ++A GGRH   ++  G+V+ WG    G+LG G     VS P LI
Sbjct: 196 TVTPAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRVKMVSSPHLI 255

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
                   E    G+H +  V                    H    +L  P +++    G
Sbjct: 256 PF-----TEQPTTGKHRSSVV--------------------HNGSTNL--PAQVSN-FPG 287

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
            +V  ++CG  H+AVVT AG L TFG G +G  GHG       P  + SL G++  R A 
Sbjct: 288 SYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGSTNDQLRPTSLPSLSGIQIERIAA 347

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA-ALVEPNF 458
           G+WHT  +               G+++ +G    G+LG G  +   +P  +    +E   
Sbjct: 348 GLWHTMCIT------------IDGRVYVFGGNQFGQLGTGASQGETLPRLLEDPCLESKL 395

Query: 459 CQ-VSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRV--EGKLTKNFVEEIA 514
            + VSCG   +  L   G V++ G   YGQLG     +   PT+V  EG   K     +A
Sbjct: 396 VKMVSCGARHSAILLEDGQVFSWGWNKYGQLGVGDSIDRNTPTQVPIEGCRPKM----VA 451

Query: 515 CGDYHVAVL 523
           CG +H  +L
Sbjct: 452 CGWWHTLLL 460



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 74/142 (52%), Gaps = 6/142 (4%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G   D   P ++ S   + ++ IA G  H   +T  G V+ +G    G+LG G     + 
Sbjct: 323 GSTNDQLRPTSLPSLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQGETL 382

Query: 276 PKLID--ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
           P+L++   L++  V++V+CG  H+  +   G +++WG +   +G LG G+ +    P ++
Sbjct: 383 PRLLEDPCLESKLVKMVSCGARHSAILLEDGQVFSWGWN--KYGQLGVGDSIDRNTPTQV 440

Query: 334 NGPLEGIHVSSVSCGPWHTAVV 355
             P+EG     V+CG WHT ++
Sbjct: 441 --PIEGCRPKMVACGWWHTLLL 460



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 36/204 (17%)

Query: 374 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
           +GD     TP  V    G+R    A G  HT A+ +            +G+++ WG G  
Sbjct: 190 YGDEYFTVTPAIVSLGPGVRITSVAAGGRHTLALSD------------TGQVWGWGYGGE 237

Query: 434 GRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA 493
           G+LG G +        V  +  P+          T   TT  H     S V+        
Sbjct: 238 GQLGLGSR--------VKMVSSPHLI------PFTEQPTTGKH---RSSVVH------NG 274

Query: 494 NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL 553
           +  LP +V      ++V+EIACG  H AV+T    + T+G G  G+ GHG T+D+  P+ 
Sbjct: 275 STNLPAQVS-NFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGSTNDQLRPTS 333

Query: 554 VEALKDKQVKSIVCGTSFTAAICL 577
           + +L   Q++ I  G   T  I +
Sbjct: 334 LPSLSGIQIERIAAGLWHTMCITI 357


>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
          Length = 385

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 169/352 (48%), Gaps = 36/352 (10%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           ++   A G RH+ L+     V S G+   G+LG         P+ I AL+ + V+LV+CG
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCG 83

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           + H+ AV   G ++ WG GS    G +G   E+S + PKK+   L  I +  VSCG +H+
Sbjct: 84  KEHSLAVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHS 140

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             ++   Q+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+    
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---- 196

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLT 468
                 S C  G  F WG    G+L    +   +    P  V AL       +SCG + T
Sbjct: 197 ------SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248

Query: 469 VALTTTGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVL 523
             LT  G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A +
Sbjct: 249 AVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYV 303

Query: 524 TSRTEVYTWGKGAN--GRLGHGDTDDRNF--PSLVEA--LKDKQVKSIVCGT 569
            +  +V ++G G +   +  H +    NF    L+ A    D QVK I  GT
Sbjct: 304 HTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT 355



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 116/222 (52%), Gaps = 13/222 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG  + +G LG G          K  SF PK + +   + +  ++CG  H+  ++
Sbjct: 94  GRVFAWGAGS-EGQLGIG--------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALS 144

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  +VFSWG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + 
Sbjct: 145 KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFG 204

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           W GSN    L   G  + +   K L+ G L+ + V  +SCG  HTAV+T  G++FTFGD 
Sbjct: 205 W-GSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDN 263

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             G LG+        P+ V+ + GL + +  CG +HT A V 
Sbjct: 264 RSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVH 304



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L +  
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   + P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  + G+L   G       N P  V ALK+  V  I CG +
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 217 VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
           V + S  P +V +   L V  I+CG  H A++T+ G+VF++G+   G+LG+    +   P
Sbjct: 220 VPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGP 279

Query: 277 KLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 310
           +L++ +  + V  + CG +HT A V  +G + ++G
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|196012953|ref|XP_002116338.1| hypothetical protein TRIADDRAFT_60324 [Trichoplax adhaerens]
 gi|190580929|gb|EDV21008.1| hypothetical protein TRIADDRAFT_60324 [Trichoplax adhaerens]
          Length = 448

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 161/345 (46%), Gaps = 48/345 (13%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           LD  +IACG     +V++ G VF+ G+   G LG G   DV+ P+ I  L  + V  VA 
Sbjct: 38  LDPSDIACGYDSLFVVSRNGGVFACGKGHMGCLGLGNCDDVNIPRQIPQLLPVMVTTVAI 97

Query: 293 --GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
             G  H  A+T  G +Y+WG  +   G LGHGN +  +L   L   L+   V+ ++CG  
Sbjct: 98  HPGGRHAMALTAEGIVYSWGCGD--RGQLGHGNTLG-YLDPTLIDELKSKEVTKIACGAM 154

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           H+  V S G++F++GDG+ G   HG+ ++   P+ + SL G   +  ACG  +T AV   
Sbjct: 155 HSIAVLSDGKIFSWGDGSNGACVHGNNLAQLLPK-IMSLNGKHIMAVACGECYTIAV--- 210

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-EARLVPTCVAALVEPNFCQVSCGHSLTV 469
                     +   +++WG G  G LG+G K  +  +PT + AL       V+CG++ + 
Sbjct: 211 ----------AGDDVWSWGHGGNGELGYGVKMPSYCMPTKIEALFFKGITNVACGYATSF 260

Query: 470 ALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           A++ TG V+                            KN  +++    +H   +    +V
Sbjct: 261 AVSATGKVWAW-------------------------VKN--QKVVASLFHALAIDENGQV 293

Query: 530 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           Y WG    G +G+ D D  N       L +K++ +I CG  + A 
Sbjct: 294 YIWGSQEIGPVGN-DEDAVNKQLKSFNLVNKKISNIACGICWDAV 337



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 146/305 (47%), Gaps = 58/305 (19%)

Query: 220 DSFVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           D  +P+ +   + + V  +A   GGRHA  +T +G V+SWG    G+LGHG       P 
Sbjct: 77  DVNIPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGIVYSWGCGDRGQLGHGNTLGYLDPT 136

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGP 336
           LID LK+  V  +ACG  H+ AV   G +++WG GSN   G   HGN ++  LPK ++  
Sbjct: 137 LIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSN---GACVHGNNLAQLLPKIMS-- 191

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSL--KGLR 393
           L G H+ +V+CG  +T +  +   ++++G G  G LG+G ++ S   P ++++L  KG+ 
Sbjct: 192 LNGKHIMAVACGECYT-IAVAGDDVWSWGHGGNGELGYGVKMPSYCMPTKIEALFFKGIT 250

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
            V  ACG             ++S +  ++GK++ W            K  ++V +   AL
Sbjct: 251 NV--ACGY------------ATSFAVSATGKVWAW-----------VKNQKVVASLFHAL 285

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVE 511
                           A+   G VY  GS   G +G+ +   N +L +     L    + 
Sbjct: 286 ----------------AIDENGQVYIWGSQEIGPVGNDEDAVNKQLKSF---NLVNKKIS 326

Query: 512 EIACG 516
            IACG
Sbjct: 327 NIACG 331



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 19/272 (6%)

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +Y WG       LL   +E +   P K +  LE +  S ++CG     VV+  G +F  G
Sbjct: 8   VYVWGSKR---NLLLAADEKNPLEPDK-SKLLENLDPSDIACGYDSLFVVSRNGGVFACG 63

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            G  G LG G+   V+ PR++  L  +     A    H         G  + +  + G +
Sbjct: 64  KGHMGCLGLGNCDDVNIPRQIPQLLPVMVTTVAI---HPG-------GRHAMALTAEGIV 113

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           ++WG GDRG+LGHG+    L PT +  L      +++CG   ++A+ + G +++ G    
Sbjct: 114 YSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSN 173

Query: 486 GQLGDPKANGKLPTRVEGKLTKNFVEEIACGD-YHVAVLTSRTEVYTWGKGANGRLGHG- 543
           G         +L  ++   L    +  +ACG+ Y +AV  +  +V++WG G NG LG+G 
Sbjct: 174 GACVHGNNLAQLLPKIM-SLNGKHIMAVACGECYTIAV--AGDDVWSWGHGGNGELGYGV 230

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                  P+ +EAL  K + ++ CG + + A+
Sbjct: 231 KMPSYCMPTKIEALFFKGITNVACGYATSFAV 262



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 6/179 (3%)

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC--GHSLTVALTTTGHVYT 479
           +G +F  G G  G LG G+ +   +P  +  L+      V+   G    +ALT  G VY+
Sbjct: 56  NGGVFACGKGHMGCLGLGNCDDVNIPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGIVYS 115

Query: 480 MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            G    GQLG     G L   +  +L    V +IACG  H   + S  ++++WG G+NG 
Sbjct: 116 WGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGA 175

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC---LHKWVSGVDQSMCSGCRIP 595
             HG+   +  P ++ +L  K + ++ CG  +T A+    +  W  G +  +  G ++P
Sbjct: 176 CVHGNNLAQLLPKIM-SLNGKHIMAVACGECYTIAVAGDDVWSWGHGGNGELGYGVKMP 233



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 3/154 (1%)

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           K++ WG   R  L   D++  L P     L   +   ++CG+     ++  G V+  G  
Sbjct: 7   KVYVWGS-KRNLLLAADEKNPLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGVFACGKG 65

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC--GDYHVAVLTSRTEVYTWGKGANGRLG 541
             G LG    +     R   +L    V  +A   G  H   LT+   VY+WG G  G+LG
Sbjct: 66  HMGCLGLGNCDDVNIPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGIVYSWGCGDRGQLG 125

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           HG+T     P+L++ LK K+V  I CG   + A+
Sbjct: 126 HGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAV 159


>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
          Length = 628

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 168/371 (45%), Gaps = 60/371 (16%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           V+ WG C   G LG          G + +   P  +  A      +++CG +H+  ++  
Sbjct: 153 VYAWG-CNRWGQLG---------TGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNY 202

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 311
           GE++SWG   GGR GHG ++    P+++ AL    +  +A G  H+ A  L G +YTWG 
Sbjct: 203 GELYSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGW 262

Query: 312 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 371
           +   +G LG+        P KL   +E  HV  V+CG  HT ++T+ G +++FG    G 
Sbjct: 263 N--KYGQLGNNTAKKHLSPNKLR-DMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQ 319

Query: 372 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           LG G       P++VD  +    V    G +HT  +             + G +++WG  
Sbjct: 320 LGVGGYADSQQPKKVDLPE--HAVDIVSGYYHTLCLT------------NKGNVYSWGYM 365

Query: 432 DRGRLGHGD-----KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
             G LG GD      + +L+P                       L+   H Y+     Y 
Sbjct: 366 SDGALGLGDIAGHQSKPKLIP-----------------------LSHIRHNYSDSMDSYN 402

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG-DT 545
            + +    G  P   +G +     E+IA G ++ A++T+  ++Y +G G + R+G+G +T
Sbjct: 403 SIYESGGEGTNPRYAKGDV----AEKIAAGAWNSAIITTSGKLYCFGFGDSYRIGNGTNT 458

Query: 546 DDRNFPSLVEA 556
           +D++ P  V++
Sbjct: 459 EDQDIPCQVKS 469



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 20/274 (7%)

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE-GIHVSSVSCGPWHT-AVVTSAGQLFT 363
           +Y+WG +   FG     ++  + LP ++   +   + V +++ G  H  A+V    Q++ 
Sbjct: 98  IYSWGYNY--FGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYA 155

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           +G   +G LG GD+ + +TP  +           +CG  H+ A+             + G
Sbjct: 156 WGCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMAL------------SNYG 203

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           +L++WG G  GR GHG +   L P  V+ALV      ++ G   + A    G VYT G  
Sbjct: 204 ELYSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWN 263

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
            YGQLG+  A   L       + K+ V ++ CG  H  +LT+   +Y++G    G+LG G
Sbjct: 264 KYGQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVG 323

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
              D   P  V+ L +  V  IV G  +   +CL
Sbjct: 324 GYADSQQPKKVD-LPEHAV-DIVSG--YYHTLCL 353



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 13/215 (6%)

Query: 360 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGSSSS 417
           Q++++G   FG      +  +  P  V+ L    LR +  A G  H  A+V         
Sbjct: 97  QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVH-------- 148

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
                 +++ WG    G+LG GD+  R  PT +A      F  VSCG   ++AL+  G +
Sbjct: 149 ---PGNQVYAWGCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGEL 205

Query: 478 YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
           Y+ G    G+ G       L  +V   L    +  +A G  H A    R  VYTWG    
Sbjct: 206 YSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKY 265

Query: 538 GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
           G+LG+        P+ +  ++   V  + CG + T
Sbjct: 266 GQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHT 300



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 5/158 (3%)

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF--CQVSCGHSLTVALTTTGH-VYTM 480
           ++++WG    G+     +    +PT V  L+        ++ G S  +A+   G+ VY  
Sbjct: 97  QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAW 156

Query: 481 GSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
           G   +GQLG   + N   PT +    T      ++CG  H   L++  E+Y+WG G  GR
Sbjct: 157 GCNRWGQLGTGDQTNRATPTPI-AIATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGR 215

Query: 540 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
            GHG       P +V AL  KQ+ S+  G   +AA  L
Sbjct: 216 TGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDL 253



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 7/127 (5%)

Query: 476 HVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNF-VEEIACGDYHV-AVLTSRTEVYTW 532
            +Y+ G   +GQ   + ++  +LPTRVE  +     V  +A GD HV A++    +VY W
Sbjct: 97  QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAW 156

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSM 588
           G    G+LG GD  +R  P+ +         S+ CG   + A+     L+ W  G     
Sbjct: 157 GCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRT 216

Query: 589 CSGCRIP 595
             G   P
Sbjct: 217 GHGSEAP 223


>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
 gi|194695574|gb|ACF81871.1| unknown [Zea mays]
 gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 418

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 173/364 (47%), Gaps = 46/364 (12%)

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKLIDALKNINVELVACG 293
           ++ACGG H   +T+ G VF+ G    G+L  G+ + V+H   P  I       VE V+ G
Sbjct: 68  SLACGGAHTLFLTQNGRVFATGLNDFGQL--GIGTSVTHMLEPVEISGFHERVVE-VSAG 124

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            HH+CAVT  G ++ WG ++     LG G    +  P K++  L  + V +V+ G  H+ 
Sbjct: 125 NHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVD-CLTDLRVKTVALGSEHSI 183

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISV---------STPREVDSLKGLRTVRAACGVWHT 404
            VT  G++ ++G    G LGHG + S+          TPR + +  G++  + A G+ H+
Sbjct: 184 AVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHS 243

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
           A + E             G LF +G       G  ++E R  P  V  +  P   +V+CG
Sbjct: 244 ACIDE------------KGTLFIFGQKTEKGFGRPNEEFR--PNIVEEI--PFSEEVACG 287

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVL 523
              T  +T +G +Y+ GS   G LG    +  + P  ++  L K  V +++CG  H AV+
Sbjct: 288 GYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVV 347

Query: 524 TSRTEVYTWGKG------------ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
            S  ++YTWG G            + G+LGHG+  D   P +V    + +   + CG + 
Sbjct: 348 -SGDDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVPFGTNARAVHVSCGFNH 406

Query: 572 TAAI 575
           T AI
Sbjct: 407 TGAI 410



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 123/289 (42%), Gaps = 80/289 (27%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G +F+WG  +G G LG      G  AG  + +  P  V+    L V+ +A G  H+  VT
Sbjct: 135 GKLFVWGRNSG-GQLG-----LGKGAGKVVST--PTKVDCLTDLRVKTVALGSEHSIAVT 186

Query: 250 KQGEVFSWGEELGGRLGHGVDSDV---------SHPKLIDALKNINV------------- 287
           ++GEV SWG    GRLGHG  S +           P+LI     I +             
Sbjct: 187 EEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACI 246

Query: 288 -----------------------------------ELVACGEHHTCAVTLSGDMYTWGGS 312
                                              E VACG +HTC VT SGD+Y+WG S
Sbjct: 247 DEKGTLFIFGQKTEKGFGRPNEEFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWG-S 305

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG----DGT 368
           N N G LG G    +  P+ L   L  + VS VSCG  HTAVV S   ++T+G    +GT
Sbjct: 306 NEN-GCLGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVV-SGDDIYTWGWGGANGT 363

Query: 369 F--------GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           F        G LGHG+ +    P  V      R V  +CG  HT A+ E
Sbjct: 364 FFEEGHSSGGQLGHGNDVDYFEPMMVPFGTNARAVHVSCGFNHTGAIYE 412



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 134/336 (39%), Gaps = 90/336 (26%)

Query: 309 WGGSNCNFGLLGHGNEMSLWLP--------KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           WG  N ++G LG G+  S W P        +  + P      +S++CG  HT  +T  G+
Sbjct: 33  WG--NGDYGRLGLGSLESRWSPTVCPFFLARAADPP------ASLACGGAHTLFLTQNGR 84

Query: 361 LFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 419
           +F  G   FG LG G  ++ +  P E+      R V  + G  H+ AV            
Sbjct: 85  VFATGLNDFGQLGIGTSVTHMLEPVEISGFH-ERVVEVSAGNHHSCAVT----------- 132

Query: 420 CSSGKLFTWGDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
            + GKLF WG    G+LG G    ++V  PT V  L +     V+ G   ++A+T  G V
Sbjct: 133 -ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEV 191

Query: 478 YTMGSPVYGQLGDPKANGKL-----PTRVEGKLTKNF----------------------- 509
            + G+   G+LG  + +  L      T    +L KNF                       
Sbjct: 192 LSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGT 251

Query: 510 -----------------------VEEI------ACGDYHVAVLTSRTEVYTWGKGANGRL 540
                                  VEEI      ACG YH  V+T   ++Y+WG   NG L
Sbjct: 252 LFIFGQKTEKGFGRPNEEFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCL 311

Query: 541 GHGDTDDRNFPSLVE-ALKDKQVKSIVCGTSFTAAI 575
           G G TD    P +++ +L    V  + CG   TA +
Sbjct: 312 GLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVV 347


>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
 gi|194702086|gb|ACF85127.1| unknown [Zea mays]
 gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
          Length = 389

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 181/416 (43%), Gaps = 58/416 (13%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           V  WG    DG LG G +    +         P  VE+     V  +  G R++  +   
Sbjct: 10  VLAWGSGE-DGQLGMGGNEEKDW---------PHFVEALGPYAVTAVVAGSRNSLAICDD 59

Query: 252 GEVFSWGEELGGRLGHGVDSDV-SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           G +F+WG    G LGH  ++   S P  +DAL    +   A G  H  AV   G  Y WG
Sbjct: 60  GRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWG 119

Query: 311 GSNCNFGLLGHGNEM----------SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 360
           G+   +G  G   E            + +P++    L+   V  V+ G  H+ V+T  G 
Sbjct: 120 GNE--YGQCGEEPERKEDGTRALRRDIPIPQRCALKLK---VRQVAAGGTHSVVLTQEGH 174

Query: 361 LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 420
           ++T+G         GD   +STP  V  L+ +R +  A G +H  A+ E ++        
Sbjct: 175 VWTWGQ----PWPPGDIKQISTPVRVQGLEKVRVI--AVGAFHNLALTEDVI-------- 220

Query: 421 SSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 480
               L+ WG+ + G+LG GD + R  P  V  L + +   ++ G   + ALT  G VY  
Sbjct: 221 ----LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAW 276

Query: 481 GSPVYGQL--GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
           G   +G+L  GD K++  +P +VE  L    + +++CG  H   L     ++++G+G +G
Sbjct: 277 GRGEHGRLGFGDDKSSHMVPLKVE-LLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHG 335

Query: 539 RLGHGDTDDR--------NFPSLVEALKDK-QVKSIVCGTSFTAAICLHKWVSGVD 585
           RLG+G             N P L  +   + Q K + CG   T AI   +W    D
Sbjct: 336 RLGYGRKVTTGHPMELPINLPPLSSSRDGRWQAKYVACGGRHTLAIA--EWTEATD 389



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 18/120 (15%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+V+ WG          G H    +   K    VP  VE     D+  ++CGG H+  + 
Sbjct: 271 GEVYAWGR---------GEHGRLGFGDDKSSHMVPLKVELLAGEDIVQVSCGGTHSVALA 321

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHP-KLIDALKNIN--------VELVACGEHHTCAV 300
           + G +FS+G    GRLG+G      HP +L   L  ++         + VACG  HT A+
Sbjct: 322 RDGRMFSYGRGDHGRLGYGRKVTTGHPMELPINLPPLSSSRDGRWQAKYVACGGRHTLAI 381



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 31/50 (62%)

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
           T V  WG G +G+LG G  +++++P  VEAL    V ++V G+  + AIC
Sbjct: 8   TAVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAIC 57


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 131/277 (47%), Gaps = 17/277 (6%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H   +     V SWG    G+LGHG   D   P  + A    ++  V CG  +T
Sbjct: 17  ISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYT 76

Query: 298 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + SG D+Y+WG  +  FG LGHG+   L++P  +   L+G+ +  +SCG  H   VT
Sbjct: 77  VARSKSGKDVYSWGWGD--FGRLGHGDPSDLFIPHPIR-ALQGLRIKQISCGDCHCLAVT 133

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
              ++ ++G    G LG G       P+++ + +G+R    A G  H+ A+ E       
Sbjct: 134 MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE------- 186

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
                 G L+ WG G  G LG GD   RL+P  V  +       VSCG   T++++++G 
Sbjct: 187 -----DGDLYGWGWGRYGNLGLGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGG 240

Query: 477 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
           +YT G   YGQLG       L  R    L+   + ++
Sbjct: 241 LYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 277



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 138/283 (48%), Gaps = 19/283 (6%)

Query: 286 NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
           +V L++ G  HT A+     + +WG      G LGHG+     LP KL+   +G  + SV
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWG--RGEDGQLGHGDTDDRLLPTKLS-AFDGQDIVSV 69

Query: 346 SCGPWHTAVVTSAGQ-LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
           +CG  +T   + +G+ ++++G G FG LGHGD   +  P  + +L+GLR  + +CG  H 
Sbjct: 70  TCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHC 129

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
            AV                K+ +WG    G LG G  +   VP  + A        V+ G
Sbjct: 130 LAVT------------MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAG 177

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVL 523
              +VA+T  G +Y  G   YG LG    N +L P +V   +  + +  ++CG  H   +
Sbjct: 178 AEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTISI 235

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
           +S   +YT G    G+LGHGD +D   P  V+AL DK +  ++
Sbjct: 236 SSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQVI 278



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 132/282 (46%), Gaps = 40/282 (14%)

Query: 127 AAPPKVLLPSESACGSVNSLSSG-------GSDGRTGH-----------LKGLSG-DTFR 167
           A+PP VLL S  A  +V  L+         G DG+ GH           L    G D   
Sbjct: 9   ASPPHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVS 68

Query: 168 VSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAV 227
           V+  +  + +   SG D       V+ WG         G   R G   G   D F+P  +
Sbjct: 69  VTCGADYTVARSKSGKD-------VYSWGW--------GDFGRLGH--GDPSDLFIPHPI 111

Query: 228 ESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV 287
            +   L ++ I+CG  H   VT + +V SWG    G LG G   D   P+ I A + I +
Sbjct: 112 RALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRI 171

Query: 288 ELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 347
           ++VA G  H+ A+T  GD+Y WG     +G LG G+     +P+K+N  ++G  +  VSC
Sbjct: 172 KMVAAGAEHSVAITEDGDLYGWGWG--RYGNLGLGDTNDRLIPEKVN--IDGDKIVMVSC 227

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
           G  HT  ++S+G L+T G   +G LGHGD      PR+V +L
Sbjct: 228 GWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 269



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 96/173 (55%), Gaps = 6/173 (3%)

Query: 407 VVEVMVGSSSSSNCSSGKLF-TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
           V+ +  G+S +    +G +  +WG G+ G+LGHGD + RL+PT ++A    +   V+CG 
Sbjct: 14  VLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGA 73

Query: 466 SLTVALTTTGH-VYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
             TVA + +G  VY+ G   +G+LG  DP ++  +P  +   L    +++I+CGD H   
Sbjct: 74  DYTVARSKSGKDVYSWGWGDFGRLGHGDP-SDLFIPHPIR-ALQGLRIKQISCGDCHCLA 131

Query: 523 LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +T   +V +WG+  NG LG G T D + P  + A +  ++K +  G   + AI
Sbjct: 132 VTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 184



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 1/123 (0%)

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA 514
           P+   +S G S TVAL T   V + G    GQLG    + +L PT++     ++ V    
Sbjct: 12  PHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTC 71

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             DY VA   S  +VY+WG G  GRLGHGD  D   P  + AL+  ++K I CG     A
Sbjct: 72  GADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLA 131

Query: 575 ICL 577
           + +
Sbjct: 132 VTM 134


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 150/339 (44%), Gaps = 21/339 (6%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           ++S VP  V +   +    ++ G  H+  V   G  ++WG    GRLG+G  +  S P L
Sbjct: 87  LNSSVPVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLL 146

Query: 279 IDA---LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           + A      + +  V  G  H+ AV  +GD+Y+WG +    G LG G  ++  +P K++ 
Sbjct: 147 VSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRS--GQLGDGTTLASSVPLKVSA 204

Query: 336 PL--EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 393
                G+  S VS G  H+  + S G+ + +G+   G LG G       P  V +  G+ 
Sbjct: 205 GAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVS 264

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
             + + G  H+ AV             S GK + WG+ D G+LG+    + L P  V+ +
Sbjct: 265 FTQVSAGDLHSLAV------------GSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPM 312

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEE 512
                 QVS G   ++A+   G+ Y  G  V GQLG+       +P  V       F   
Sbjct: 313 GGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTF-TR 371

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
           I  G  H     S    YTWG  + G+LG+G +D    P
Sbjct: 372 IEAGGLHSLTAASDENTYTWGANSFGQLGNGTSDGSLVP 410



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 144/324 (44%), Gaps = 19/324 (5%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++ G  H+  +   G +++WG    G+LG+    + S P L+     +    V+ G  H+
Sbjct: 54  VSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHS 113

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL--EGIHVSSVSCGPWHTAVV 355
            AV   G+ Y WG  N + G LG+G      +P  ++      G+ +S V  G +H+  V
Sbjct: 114 LAVGSDGNAYAWG-RNTD-GRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAV 171

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS---LKGLRTVRAACGVWHTAAVVEVMV 412
            S G ++++G    G LG G  ++ S P +V +     G+   + + G  H+ A+     
Sbjct: 172 GSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAI----- 226

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   S+GK + WG+   G+LG G       P  V+A    +F QVS G   ++A+ 
Sbjct: 227 -------GSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVG 279

Query: 473 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
           + G  Y  G+   GQLG+      L   +   +    V +++ G  H   + +    Y W
Sbjct: 280 SDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAW 339

Query: 533 GKGANGRLGHGDTDDRNFPSLVEA 556
           G   NG+LG+        P +V A
Sbjct: 340 GLNVNGQLGNNTITTSTVPVMVTA 363



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 32/300 (10%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYA-GVKMDSFVPKAVESAVV---LDVQNIACGGRHA 245
           GD++ WG            +RSG    G  + S VP  V +  V   +    ++ G RH+
Sbjct: 175 GDIYSWGY-----------NRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHS 223

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 305
             +   G+ ++WGE  GG+LG G  S    P L+ A   ++   V+ G+ H+ AV   G 
Sbjct: 224 LAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSDGK 283

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
            Y WG  N + G LG+    S   P  ++ P+ G+ V+ VS G  H+  + + G  + +G
Sbjct: 284 AYAWG--NNDSGQLGNATTTSSLAPVLVS-PMGGLAVTQVSAGADHSLAIGADGNAYAWG 340

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
               G LG+    + + P  V +  G+   R   G  H            S +  S    
Sbjct: 341 LNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLH------------SLTAASDENT 388

Query: 426 FTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
           +TWG    G+LG+G  +  LVP  ++    P   +VS G  +   L+ +   +T+ +P +
Sbjct: 389 YTWGANSFGQLGNGTSDGSLVPVAISRF--PVITEVSFGGVVGTELSQSNGSWTVVAPAH 446



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 134/313 (42%), Gaps = 29/313 (9%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+ + WG  T DG LG G     S   +     VP  V       +  +  GG H+  V 
Sbjct: 120 GNAYAWGRNT-DGRLGNGTSTGSSVPLLVSAGAVPSGVT------ISQVMAGGFHSLAVG 172

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA---LKNINVELVACGEHHTCAVTLSGDM 306
             G+++SWG    G+LG G     S P  + A      +    V+ G+ H+ A+  +G  
Sbjct: 173 SNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKT 232

Query: 307 YTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
           Y WG      G LG G+      P  ++ P  G+  + VS G  H+  V S G+ + +G+
Sbjct: 233 YAWG--EARGGQLGIGSISRTPAPALVSAP-AGVSFTQVSAGDLHSLAVGSDGKAYAWGN 289

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 426
              G LG+    S   P  V  + GL   + + G  H+ A+             + G  +
Sbjct: 290 NDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAI------------GADGNAY 337

Query: 427 TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPV 484
            WG    G+LG+       VP  V A     F ++  G  HSLT A  +  + YT G+  
Sbjct: 338 AWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLHSLTAA--SDENTYTWGANS 395

Query: 485 YGQLGDPKANGKL 497
           +GQLG+  ++G L
Sbjct: 396 FGQLGNGTSDGSL 408



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 135/301 (44%), Gaps = 23/301 (7%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L  +    V+ G +H+ A+   G++Y WG ++   G LG+ + ++  +P  ++ P +G+ 
Sbjct: 46  LPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSS--GQLGNNSILNSSVPVLVSTP-DGVT 102

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS---LKGLRTVRAA 398
            + VS G  H+  V S G  + +G  T G LG+G     S P  V +     G+   +  
Sbjct: 103 FTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVM 162

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP-- 456
            G +H+ AV             S+G +++WG    G+LG G   A  VP  V+A   P  
Sbjct: 163 AGGFHSLAV------------GSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAG 210

Query: 457 -NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIA 514
             F QVS G   ++A+ + G  Y  G    GQLG    +    P  V      +F  +++
Sbjct: 211 VTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSF-TQVS 269

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            GD H   + S  + Y WG   +G+LG+  T     P LV  +    V  +  G   + A
Sbjct: 270 AGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLA 329

Query: 575 I 575
           I
Sbjct: 330 I 330


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 121/214 (56%), Gaps = 15/214 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACG 293
           +  IACG  H+  ++K GE+F+WG+ L G+LG G + + +  P+ ++ L  + +  ++ G
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 210

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           + H+ A+++SG++Y+WG +  + G LG G+      P  L   L+   V  ++CG  HTA
Sbjct: 211 KAHSMALSMSGNVYSWGRN--DLGQLGLGHTDGEDFP-SLIETLDNQQVEFLACGGSHTA 267

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++T+ G +FTFG G +G LGH    +   PR V  L G R  + ACG  HT A V  +  
Sbjct: 268 LLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDL-- 325

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                    GK+F++G G  G+LG+G    +L+P
Sbjct: 326 ---------GKVFSFGSGKEGQLGNGGTHNQLIP 350



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 118/224 (52%), Gaps = 14/224 (6%)

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACG 400
           +  ++CG +H+  ++  G+LF +G    G LG G    S+ TP+ V+ L G+  V+ + G
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 210

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             H+ A+              SG +++WG  D G+LG G  +    P+ +  L       
Sbjct: 211 KAHSMAL------------SMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEF 258

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH- 519
           ++CG S T  LTT G V+T G+  YGQLG      +L  R+  +L  N V +IACG  H 
Sbjct: 259 LACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHT 318

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
           +A ++   +V+++G G  G+LG+G T ++  P  ++   ++++K
Sbjct: 319 LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELK 362



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 27/237 (11%)

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           + + SV  G  H  +++S G+ F +              S+   R    L+    ++ AC
Sbjct: 109 MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQIAC 156

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNF 458
           G +H+ A+               G+LF WG    G+LG G   A +  P  V  L     
Sbjct: 157 GDYHSLAL------------SKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPL 204

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGD 517
            Q+S G + ++AL+ +G+VY+ G    GQLG    +G+  P+ +E  L    VE +ACG 
Sbjct: 205 VQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIE-TLDNQQVEFLACGG 263

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            H A+LT+   V+T+G G  G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 264 SHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLA 320



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 13/187 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+    G LG G      +A +      P+AVE    + +  I+ G  H+  ++
Sbjct: 168 GELFAWGQ-NLHGQLGVG----RLFASIP----TPQAVEHLSGVPLVQISAGKAHSMALS 218

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G V+SWG    G+LG G       P LI+ L N  VE +ACG  HT  +T  G ++T+
Sbjct: 219 MSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTF 278

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G     +G LGH +  +   P +L   L G  V+ ++CG  HT A V+  G++F+FG G 
Sbjct: 279 GAG--KYGQLGHNSTQNELRP-RLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGK 335

Query: 369 FGVLGHG 375
            G LG+G
Sbjct: 336 EGQLGNG 342



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 5/147 (3%)

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           DG      +  + AR    C+  L E +  Q++CG   ++AL+  G ++  G  ++GQLG
Sbjct: 127 DGKPFEYNYSIEHARF--QCI--LQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLG 182

Query: 490 DPKANGKLPT-RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
             +    +PT +    L+   + +I+ G  H   L+    VY+WG+   G+LG G TD  
Sbjct: 183 VGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGE 242

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +FPSL+E L ++QV+ + CG S TA +
Sbjct: 243 DFPSLIETLDNQQVEFLACGGSHTALL 269


>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
          Length = 364

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 169/352 (48%), Gaps = 36/352 (10%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           ++   A G RH+ L+     V S G+   G+LG         P+ I AL+ + V+LV+CG
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCG 83

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           + H+ AV   G ++ WG GS    G +G   E+S + PKK+   L  I +  VSCG +H+
Sbjct: 84  KEHSLAVCHKGRVFAWGAGSEGQLG-IGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHS 140

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
             ++   Q+F++G  + G LG G    S ++P+ V SL+G+   + A G  H+ A+    
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---- 196

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV---PTCVAALVEPNFCQVSCGHSLT 468
                 S C  G  F WG    G+L    +   +    P  V AL       +SCG + T
Sbjct: 197 ------SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248

Query: 469 VALTTTGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYH-VAVL 523
             LT  G V+T G    GQLG    P+  G +L  R++G      V +I CG YH +A +
Sbjct: 249 AVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYV 303

Query: 524 TSRTEVYTWGKGAN--GRLGHGDTDDRNF--PSLVEA--LKDKQVKSIVCGT 569
            +  +V ++G G +   +  H +    NF    L+ A    D QVK I  GT
Sbjct: 304 HTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT 355



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 116/222 (52%), Gaps = 13/222 (5%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VF WG  + +G LG G          K  SF PK + +   + +  ++CG  H+  ++
Sbjct: 94  GRVFAWGAGS-EGQLGIG--------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALS 144

Query: 250 KQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
           K  +VFSWG+   G+LG G +    + P+ + +L+ I +  VA G  H+ A++L G  + 
Sbjct: 145 KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFG 204

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           W GSN    L   G  + +   K L+ G L+ + V  +SCG  HTAV+T  G++FTFGD 
Sbjct: 205 W-GSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDN 263

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
             G LG+        P+ V+ + GL + +  CG +HT A V 
Sbjct: 264 RSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVH 304



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
           G  +   + G  H+ ++ +  ++ + GD + G LG         P  + +L+ L     +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVPTCVAALVEPN 457
           CG  H+ AV            C  G++F WG G  G+LG G+ KE    P  +  L +  
Sbjct: 82  CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK 129

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEI 513
             QVSCGH  ++AL+    V++ G   +GQLG  K   + P++   +  ++     + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTS 570
           A G  H   L+     + WG  + G+L   G       N P  V ALK+  V  I CG +
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246

Query: 571 FTAAI 575
            TA +
Sbjct: 247 HTAVL 251



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 217 VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
           V + S  P +V +   L V  I+CG  H A++T+ G+VF++G+   G+LG+    +   P
Sbjct: 220 VPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGP 279

Query: 277 KLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 310
           +L++ +  + V  + CG +HT A V  +G + ++G
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 184/405 (45%), Gaps = 55/405 (13%)

Query: 222  FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG---HGVDSDVSHPKL 278
            F P  V++  +     IA G  HA  +   G V+SWG    G+LG    G  S  + P+ 
Sbjct: 1024 FTPTKVDA--LPPAAKIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQK 1081

Query: 279  IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
            I+A+ N  V  +ACG  H+ AV   G +++WG +   +G LG G+  S   P+K+N    
Sbjct: 1082 INAISN--VAAIACGGSHSLAVARDGSLWSWGYNY--YGQLGLGDNYSKTTPQKVNAI-- 1135

Query: 339  GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
              +V++++ G +++  +T  G ++++GD + G LG GD    +TP++V+ L  +  +  A
Sbjct: 1136 -SNVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAI--A 1192

Query: 399  CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
             G  H+ A+               G +++WG   RG+LG  D + R  P  V  +   N 
Sbjct: 1193 AGEDHSLALTR------------DGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTI--SNI 1238

Query: 459  CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG----DPKANGKLPTRVEGKLTKNFVEEIA 514
              ++ G+S + A++  G  +  G    GQLG       AN   P +V  K+  N V  ++
Sbjct: 1239 KAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKV--KVISNVVG-LS 1295

Query: 515  CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             G+YH   LT    ++ WG   +G++G    D +N    V+  +  +V  +         
Sbjct: 1296 GGNYHSLALTEDGALWAWGDNDDGQIGSTGGDRKN---PVQVFQSSEVFHLYLDVD---- 1348

Query: 575  ICLHKWVSGVDQSMCSGCRIPFNFKRKRHN-------CYNCGLVY 612
                    G D  M   C   +N  ++  +       C NC  +Y
Sbjct: 1349 ------ADGADDEMYDNCLSLYNPGQEDADGDGAGDLCDNCPAIY 1387



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 168/345 (48%), Gaps = 33/345 (9%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGV--DSDVSHPKLIDALKNINVELVACGEH 295
           +A GG  +  +   G V+SWG    G+LG G+  + DV  P  +DAL       +A G  
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPL--AASIAAGGG 554

Query: 296 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLW-LPKKLNGPLEGIHVSSVSCGPWHTAV 354
           H  A+   G +++WG ++     LG G   S    P+K+N      +V++++CG  H+  
Sbjct: 555 HALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAI---SNVAAIACGGSHSLA 611

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           +   G  +++G   +G LG GD +S +TPR+V++L     V  A G  H+ A+       
Sbjct: 612 LARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS--NVVAMAAGDRHSLALTL----- 664

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                   G L++WGD   G+LG GD + R  P  V A+   N   ++ G+  ++ALT  
Sbjct: 665 -------DGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAI--SNVVAIAAGYRHSLALTRD 715

Query: 475 GHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           G V++ G+   GQLG    + +  P  V    T + ++ IA G+ +   ++    V+ WG
Sbjct: 716 GSVWSWGNNTRGQLGLGDNDDRNTPQPVT---TISNIKAIAVGNNYSIAISEEGLVWAWG 772

Query: 534 KGANGRLG---HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              +G+LG   HG   D N P  V  + +  V  +  G+S + A+
Sbjct: 773 YNCSGQLGIGTHGSLADENTPQKVIVISN--VVGLSAGSSHSIAL 815



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 133/261 (50%), Gaps = 26/261 (9%)

Query: 231 VVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV 290
            + +V  IACGG H+  + + G  +SWG    G+LG G +   + P+ ++AL   NV  +
Sbjct: 595 AISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS--NVVAM 652

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 350
           A G+ H+ A+TL G +++WG  +  +G LG G+      P+K+N      +V +++ G  
Sbjct: 653 AAGDRHSLALTLDGSLWSWG--DNTYGQLGLGDNDHRNTPRKVNAI---SNVVAIAAGYR 707

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 410
           H+  +T  G ++++G+ T G LG GD    +TP+ V ++  ++ +  A G  ++ A+ E 
Sbjct: 708 HSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAI--AVGNNYSIAISE- 764

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLG---HGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
                       G ++ WG    G+LG   HG       P  V  +V  N   +S G S 
Sbjct: 765 -----------EGLVWAWGYNCSGQLGIGTHGSLADENTPQKV--IVISNVVGLSAGSSH 811

Query: 468 TVALTTTGHVYTMGSPVYGQL 488
           ++ALT  G ++  G+   GQ+
Sbjct: 812 SIALTEDGALWAWGNNEAGQI 832



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 136/289 (47%), Gaps = 24/289 (8%)

Query: 289  LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            +VA G + + A+   G +++WG +      LG G  ++++ P K++        + ++ G
Sbjct: 985  MVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP---AAKIAAG 1041

Query: 349  PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAV 407
              H   +   G ++++G  + G LG G   + ST      +  +  V A ACG  H+ AV
Sbjct: 1042 DNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLAV 1101

Query: 408  VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
                           G L++WG    G+LG GD  ++  P  V A+   N   ++ G   
Sbjct: 1102 AR------------DGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAI--SNVAAIAAGEYY 1147

Query: 468  TVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            ++ALT  G V++ G    GQLG     +   P +VE     + V  IA G+ H   LT  
Sbjct: 1148 SLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVE---VLSNVAAIAAGEDHSLALTRD 1204

Query: 527  TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              V++WG+ + G+LG  D DDRN P  V  + +  +K+I  G S + AI
Sbjct: 1205 GSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISN--IKAIAAGNSHSFAI 1251



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 149/335 (44%), Gaps = 47/335 (14%)

Query: 244 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 303
           H+  +   G V+ WG     +LG G D +   P+    + NI    VA G   + A+   
Sbjct: 78  HSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVSNI--VSVAAGRLFSLALASD 135

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           G ++ WGG+   +G LG G+  +   P K  G  +   V++++ G +H    T +G+++ 
Sbjct: 136 GSLWAWGGNY--YGQLGMGDNDNRLTPSKTPGLSD---VAAIAGGDYHALAATQSGEVWA 190

Query: 364 FGDGTFGVLGH-GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
            G    G LG  GD      P +V  L  +++V  A G + + A+             + 
Sbjct: 191 MGRNDHGQLGFTGDH--ADAPVQVAGLSNVKSV--AAGEFFSLALK------------ND 234

Query: 423 GKLFTWGDGDRGRLGHG-DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           G ++ WG+ +  +LG G   EA   P  +A L   N   ++ G    +AL   G V+  G
Sbjct: 235 GTVWAWGNNESAQLGTGIAGEAVATPAPIAVL--SNITAIAAGRRHAMALAEDGSVWAWG 292

Query: 482 SPVYGQLG-----DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           +   GQLG      PKA G++ +  +       V  IA G +H   LTS   ++ WG   
Sbjct: 293 ANGSGQLGFGDFETPKAPGRVSSLAD-------VTAIASGWFHSLALTSDGVLWAWGNNG 345

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 571
           +GRLG   T D++ P+        QV SI    SF
Sbjct: 346 DGRLGTDATSDQSLPA--------QVSSISNAVSF 372



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 157/316 (49%), Gaps = 37/316 (11%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+ WG  + DG LG  +  SG+Y+        P+ + +  + +V  IACGG H+  V 
Sbjct: 1052 GSVWSWGYNS-DGQLG--LGSSGTYSTKNR----PQKINA--ISNVAAIACGGSHSLAVA 1102

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            + G ++SWG    G+LG G +   + P+ ++A+   NV  +A GE+++ A+T  G +++W
Sbjct: 1103 RDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAIS--NVAAIAAGEYYSLALTRDGSVWSW 1160

Query: 310  GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G  + + G LG G+      P+K    +E + +V++++ G  H+  +T  G ++++G  +
Sbjct: 1161 G--DNSDGQLGLGDNEDRNTPQK----VEVLSNVAAIAAGEDHSLALTRDGSVWSWGRNS 1214

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
             G LG  D    +TP+ V ++  ++ +  A G  H+ A+ E             G  + W
Sbjct: 1215 RGQLGLDDNDDRNTPQPVTTISNIKAI--AAGNSHSFAISE------------EGLAWAW 1260

Query: 429  GDGDRGRLGHGDKEA---RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            G    G+LG G   +      P  V  +   N   +S G+  ++ALT  G ++  G    
Sbjct: 1261 GYNYDGQLGIGTSGSLANENTPQKVKVI--SNVVGLSGGNYHSLALTEDGALWAWGDNDD 1318

Query: 486  GQLGDPKANGKLPTRV 501
            GQ+G    + K P +V
Sbjct: 1319 GQIGSTGGDRKNPVQV 1334



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 24/289 (8%)

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEGIHVSSVSC 347
           +VA G   + A+   G +++WG +      LG G    ++ P  ++  PL     +S++ 
Sbjct: 496 MVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPL----AASIAA 551

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAA 406
           G  H   + S G ++++G  + G LG G   + ST      +  +  V A ACG  H+ A
Sbjct: 552 GGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACGGSHSLA 611

Query: 407 VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
           +               G  ++WG    G+LG GD  ++  P  V AL   N   ++ G  
Sbjct: 612 LAR------------DGSFWSWGYNYYGQLGLGDNVSKTTPRKVNAL--SNVVAMAAGDR 657

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            ++ALT  G +++ G   YGQLG    + +   R    ++   V  IA G  H   LT  
Sbjct: 658 HSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISN--VVAIAAGYRHSLALTRD 715

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             V++WG    G+LG GD DDRN P  V  + +  +K+I  G +++ AI
Sbjct: 716 GSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISN--IKAIAVGNNYSIAI 762



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 163/355 (45%), Gaps = 43/355 (12%)

Query: 190 GDVFIWGECTGDGI-LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 248
           G V++WG    + + LG  I+R             P+  ++ VV ++ ++A G   +  +
Sbjct: 86  GTVWVWGRNDYNQLGLGDDINR-----------LAPE--QAPVVSNIVSVAAGRLFSLAL 132

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
              G +++WG    G+LG G + +   P     L   +V  +A G++H  A T SG+++ 
Sbjct: 133 ASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLS--DVAAIAGGDYHALAATQSGEVWA 190

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G +  + G LG   + +   P ++ G     +V SV+ G + +  + + G ++ +G+  
Sbjct: 191 MGRN--DHGQLGFTGDHAD-APVQVAGL---SNVKSVAAGEFFSLALKNDGTVWAWGNNE 244

Query: 369 FGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
              LG G    +V+TP  +  L  +  +  A G  H  A+ E             G ++ 
Sbjct: 245 SAQLGTGIAGEAVATPAPIAVLSNITAI--AAGRRHAMALAE------------DGSVWA 290

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG    G+LG GD E    P  V++L +     ++ G   ++ALT+ G ++  G+   G+
Sbjct: 291 WGANGSGQLGFGDFETPKAPGRVSSLAD--VTAIASGWFHSLALTSDGVLWAWGNNGDGR 348

Query: 488 LG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
           LG D  ++  LP +V      N V   A G  H   + +   V++WG  A G+LG
Sbjct: 349 LGTDATSDQSLPAQVSS--ISNAV-SFAGGQRHSLAIAADGSVWSWGGNAYGQLG 400



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 146/370 (39%), Gaps = 45/370 (12%)

Query: 230 AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI-NVE 288
           AV+ ++  IA G RHA  + + G V++WG    G+LG G   D   PK    + ++ +V 
Sbjct: 264 AVLSNITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFG---DFETPKAPGRVSSLADVT 320

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            +A G  H+ A+T  G ++ WG  N   G LG        LP +++     +   S + G
Sbjct: 321 AIASGWFHSLALTSDGVLWAWG--NNGDGRLGTDATSDQSLPAQVSSISNAV---SFAGG 375

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR--------AACG 400
             H+  + + G ++++G   +G LG       S    V +L                A  
Sbjct: 376 QRHSLAIAADGSVWSWGGNAYGQLGVESLTPASVLTPVHTLYSGEDFHLFYDTDGDGAAN 435

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNF 458
           +W      +  +  S +  C S      G  D      GD        C      ++P F
Sbjct: 436 IWDDDDDGDGFLDESDNCPCVSNP----GQEDE----DGDGTGDFCDGCPGDFFKIQPGF 487

Query: 459 C-------QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK---LPTRVEGKLTKN 508
                    V+ G   ++AL T G V++ G+   GQLG           PT V+      
Sbjct: 488 SGCGNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVD---ALP 544

Query: 509 FVEEIACGDYHVAVLTSRTEVYTWGKGA---NGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
               IA G  H   L S   V++WG+ +    G    G     N P  + A+ +  V +I
Sbjct: 545 LAASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISN--VAAI 602

Query: 566 VCGTSFTAAI 575
            CG S + A+
Sbjct: 603 ACGGSHSLAL 612


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 177/407 (43%), Gaps = 53/407 (13%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           V  WG    DG LG G +    +A         + V +   L V  +  G R++  +   
Sbjct: 13  VLAWGSGE-DGQLGMGGYEEEDWA---------RGVAALDALAVSAVVAGSRNSLAICAD 62

Query: 252 GEVFSWGEELGGRLGHGVDSDV-SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           G +F+WG    G LGH  ++   S P  +DAL  +++   A G  H  AV   G  Y WG
Sbjct: 63  GRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWG 122

Query: 311 GSNCNFGLLGHGNEMSLWLPKKL-------NGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           G+   +G  G   E      + L        G    + V  V+ G  H+ V+T  G ++T
Sbjct: 123 GNE--YGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWT 180

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           +G         GD   +STP  V  L+ ++ +  A G +H  A+ E             G
Sbjct: 181 WGQ----PWPPGDIKQISTPVRVQGLENVKVI--AVGAFHNLALTE------------DG 222

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            L+ WG+ + G+LG GD + R  P  V  L + +   ++ G   + ALT  G VY  G  
Sbjct: 223 ILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRG 282

Query: 484 VYGQL--GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            +G+L  GD K++  +P +VE  L    + +++CG  H   LT    ++++G+G +GRLG
Sbjct: 283 EHGRLGFGDDKSSHMVPQKVE-LLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLG 341

Query: 542 HGDTDDRNFPSLV------------EALKDKQVKSIVCGTSFTAAIC 576
           +G       P  V            ++    Q + + CG   T AI 
Sbjct: 342 YGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 36/270 (13%)

Query: 217 VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
           ++ D  +P+    A  L V+ +A GG H+ ++T+ G V++WG+        G    +S P
Sbjct: 143 LRRDIPIPQGC--APKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWP----PGDIKQISTP 196

Query: 277 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
             +  L+N+ V  +A G  H  A+T  G ++ WG  N  +G LG G+      P ++ G 
Sbjct: 197 VRVQGLENVKV--IAVGAFHNLALTEDGILWAWG--NNEYGQLGTGDTQPRSQPIRVEG- 251

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTV 395
           L  + +  ++ G WH+  +T  G+++ +G G  G LG GD + S   P++V+ L G   +
Sbjct: 252 LSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDII 311

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
           + +CG  H+ A+               G++F++G GD GRLG+G K     P  V   + 
Sbjct: 312 QVSCGGTHSVALTR------------DGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLP 359

Query: 456 PNFCQ------------VSCGHSLTVALTT 473
           P                V+CG   T+A+ T
Sbjct: 360 PPGTSGGDSGGQWQARYVACGGRHTLAIAT 389



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 21/123 (17%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+V+ WG          G H    +   K    VP+ VE     D+  ++CGG H+  +T
Sbjct: 274 GEVYAWGR---------GEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALT 324

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLI------------DALKNINVELVACGEHHT 297
           + G +FS+G    GRLG+G      HP  +            D+        VACG  HT
Sbjct: 325 RDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHT 384

Query: 298 CAV 300
            A+
Sbjct: 385 LAI 387


>gi|449663407|ref|XP_002166698.2| PREDICTED: uncharacterized protein LOC100197214 [Hydra
            magnipapillata]
          Length = 1459

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 174/379 (45%), Gaps = 54/379 (14%)

Query: 222  FVPKAVESAVVL--DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
             +P+ +E    L   V +I+ GG   A +T +  + S+G    GRL   V+ + S  K I
Sbjct: 828  LIPQLIEYDHKLYGHVIDISAGGLFTAAITDRNYILSFGCGKYGRLAGSVNEEDS--KNI 885

Query: 280  DALK----NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
             A K    N N+  ++CG  H C +T  G +Y WG S       G  N M    P+K+  
Sbjct: 886  IAYKFDDSNKNLSAISCGIWHACILTQCGSVYVWGYSKA----CGSTNNM--LTPQKV-- 937

Query: 336  PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD---RISVSTPREVDSLKGL 392
              + ++V  ++CG   T   T+ G+ +++G    GVLGHG+   +I  S P+E+      
Sbjct: 938  --DLLNVVGIACGNNFTLCWTTCGKAYSWGVNNHGVLGHGNSSYKIEDS-PKEITGFCDH 994

Query: 393  RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH-GDKEARLVPTCVA 451
              V+ + G  H  AV +             G LF WG+   G LG  G+ +  L P  V 
Sbjct: 995  FIVQMSAGTTHCGAVTK------------DGYLFVWGNNKYGALGIVGETKDILKPKLVD 1042

Query: 452  ALVEPNFCQVSC------GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKL 505
             +   N  Q+SC      GHSL   LTT+G ++  G    G+LG    N     + + K+
Sbjct: 1043 NV--SNVKQISCNIGDNHGHSL--LLTTSGRLFASGDGYKGKLGLGNFNSSSIFQNQSKI 1098

Query: 506  TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR------NFPSLVEALKD 559
              NFV+ I  G  H A ++   E++TWG G++GRLGH +          N P  VEA   
Sbjct: 1099 --NFVQ-ICSGGIHSAGVSDTGELFTWGCGSDGRLGHPEAAGHRYLYHSNIPKAVEAFSK 1155

Query: 560  KQVKSIVCGTSFTAAICLH 578
            K+V  +      T A+ L 
Sbjct: 1156 KRVLKVSASYYHTVALELQ 1174



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 123/292 (42%), Gaps = 44/292 (15%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V++WG                   G   +   P+ V+   +L+V  IACG       T
Sbjct: 914  GSVYVWGYSKA--------------CGSTNNMLTPQKVD---LLNVVGIACGNNFTLCWT 956

Query: 250  KQGEVFSWGEELGGRLGHGVDSDV--SHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
              G+ +SWG    G LGHG  S      PK I    +  +  ++ G  H  AVT  G ++
Sbjct: 957  TCGKAYSWGVNNHGVLGHGNSSYKIEDSPKEITGFCDHFIVQMSAGTTHCGAVTKDGYLF 1016

Query: 308  TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP--WHTAVVTSAGQLFTFG 365
             WG  N  +G LG   E    L  KL   +  +   S + G    H+ ++T++G+LF  G
Sbjct: 1017 VWG--NNKYGALGIVGETKDILKPKLVDNVSNVKQISCNIGDNHGHSLLLTTSGRLFASG 1074

Query: 366  DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 425
            DG  G LG G+  S S      +   +  V+   G  H+A V +            +G+L
Sbjct: 1075 DGYKGKLGLGNFNSSSI---FQNQSKINFVQICSGGIHSAGVSD------------TGEL 1119

Query: 426  FTWGDGDRGRLGHGDKEARL------VPTCVAALVEPNFCQVSCGHSLTVAL 471
            FTWG G  GRLGH +           +P  V A  +    +VS  +  TVAL
Sbjct: 1120 FTWGCGSDGRLGHPEAAGHRYLYHSNIPKAVEAFSKKRVLKVSASYYHTVAL 1171


>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|223950263|gb|ACN29215.1| unknown [Zea mays]
 gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 483

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACG 293
           V NI+    HAA VT+ GEVF+ G+      GHG V   +  P  ++ALK I  + VA G
Sbjct: 156 VINISASHNHAAFVTESGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATG 215

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN---GPLEGIHVSSVSCGPW 350
              T  +T  G +YT G SN + G LGHG+ +    PK +    GP +   V  ++ G  
Sbjct: 216 LSFTVILTRDGQVYTCG-SNTH-GQLGHGDTIDRATPKLIELFEGPTQ---VVQIAAGAS 270

Query: 351 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK--GLRTVRAACGVWHTAAVV 408
           +T  VT  G + +FG  T   LGHGD+     PR + S K   +  VR + G  H  A+ 
Sbjct: 271 YTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALD 330

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
            +            G ++TWG G  G LGHGD+  +  P  + +L      QV      T
Sbjct: 331 AL------------GHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKT 378

Query: 469 VALTTTGHVYTMGSPVYGQLG--DPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             LT  G V   G   +G LG  D   + K +  RV   L  ++V +I+ G YH   +T+
Sbjct: 379 FVLTDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPRVLESLQDHYVSQISTGLYHTVAVTN 438

Query: 526 RTEVYTWGKGANGRLGH 542
           +  V+ +G     +LG 
Sbjct: 439 KGIVFGFGDNERAQLGQ 455



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 158/350 (45%), Gaps = 39/350 (11%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVD-------SDVSHPKLIDALKNINVELVACGE 294
           GR+  L+     V+S G  L G LGHG D       S VS P L   +       ++   
Sbjct: 110 GRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVIN------ISASH 163

Query: 295 HHTCAVTLSGDMYTWGGSN---CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           +H   VT SG+++T G ++   C  G +G     +++ P ++   L+GI    V+ G   
Sbjct: 164 NHAAFVTESGEVFTCGDNSSLCCGHGEVGR----TIFRPMQVEA-LKGIPCKQVATGLSF 218

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG-LRTVRAACGVWHTAAVVEV 410
           T ++T  GQ++T G  T G LGHGD I  +TP+ ++  +G  + V+ A G  +T AV + 
Sbjct: 219 TVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTD- 277

Query: 411 MVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF--CQVSCGHSLT 468
                       G + ++G      LGHGD+   L+P  + +    N    +VS G    
Sbjct: 278 -----------DGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHA 326

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           VAL   GHVYT G    G LG    N K    + G L      ++        VLT    
Sbjct: 327 VALDALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGS 386

Query: 529 V--YTW-GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           V  + W G G+ G L  G +D    P ++E+L+D  V  I  G   T A+
Sbjct: 387 VVAFGWMGFGSLGFLDRGTSDKVMRPRVLESLQDHYVSQISTGLYHTVAV 436



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 140/283 (49%), Gaps = 22/283 (7%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP-KKLNGPLEGIHVSSVSCG 348
           VA G +HT  V  S  +Y+ G S C  G+LGHG + +      +++ P     V ++S  
Sbjct: 107 VATGRYHTLLVHDS-SVYSCGSSLC--GVLGHGPDTTQCAAFSRVSFPSLS-RVINISAS 162

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
             H A VT +G++FT GD +    GHG+   ++  P +V++LKG+   + A G+  T  +
Sbjct: 163 HNHAAFVTESGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVIL 222

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP-NFCQVSCGHS 466
                          G+++T G    G+LGHGD   R  P  +     P    Q++ G S
Sbjct: 223 TR------------DGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQIAAGAS 270

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNF-VEEIACGDYHVAVLT 524
            T A+T  G V++ GS     LG    + +L P  ++    +N  V  ++ GD H   L 
Sbjct: 271 YTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALD 330

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 567
           +   VYTWG+G  G LGHGD +D+  P L+ +LK  QV   VC
Sbjct: 331 ALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKG-QVAVQVC 372



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 36/332 (10%)

Query: 190 GDVFIWGE----CTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHA 245
           G+VF  G+    C G G +G  I R             P  VE+   +  + +A G    
Sbjct: 173 GEVFTCGDNSSLCCGHGEVGRTIFR-------------PMQVEALKGIPCKQVATGLSFT 219

Query: 246 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-INVELVACGEHHTCAVTLSG 304
            ++T+ G+V++ G    G+LGHG   D + PKLI+  +    V  +A G  +T AVT  G
Sbjct: 220 VILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTDDG 279

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
            ++++G  +C    LGHG++    LP+ +       IHV  VS G  H   + + G ++T
Sbjct: 280 TVHSFG--SCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYT 337

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
           +G G  G LGHGD    ++P  + SLKG   V+  C       V+         ++  S 
Sbjct: 338 WGRGYCGALGHGDENDKTSPELIGSLKGQVAVQ-VCARKRKTFVL---------TDEGSV 387

Query: 424 KLFTW-GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
             F W G G  G L  G  +  + P  + +L +    Q+S G   TVA+T  G V+  G 
Sbjct: 388 VAFGWMGFGSLGFLDRGTSDKVMRPRVLESLQDHYVSQISTGLYHTVAVTNKGIVFGFGD 447

Query: 483 PVYGQLGDPKANGKL-PTRVEGKLTKNFVEEI 513
               QLG     G L PT +   + +  +E+I
Sbjct: 448 NERAQLGQEYIRGCLKPTEI---MFQKSIEDI 476



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 6/187 (3%)

Query: 216 GVKMDSFVPKAVESAVV--LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 273
           G + D  +P+A++S     + V  ++ G  HA  +   G V++WG    G LGHG ++D 
Sbjct: 295 GDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDK 354

Query: 274 SHPKLIDALKNINVELVACGEHHTCAVTLSGDM--YTWGGSNCNFGLLGHGNEMSLWLPK 331
           + P+LI +LK      V   +  T  +T  G +  + W G   + G L  G    +  P+
Sbjct: 355 TSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFG-SLGFLDRGTSDKVMRPR 413

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
            L   L+  +VS +S G +HT  VT+ G +F FGD     LG         P E+   K 
Sbjct: 414 VLE-SLQDHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKS 472

Query: 392 LRTVRAA 398
           +  +  A
Sbjct: 473 IEDIPIA 479


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 162/356 (45%), Gaps = 27/356 (7%)

Query: 222  FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
             +P  V+         IA G  H   V + G V++WG    G+LG G  +    P  +  
Sbjct: 812  LLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQV 871

Query: 282  LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
               ++V  +A G +H  A    G ++TWG    ++G LG G      LP ++ G ++   
Sbjct: 872  QGLMDVTAMAAGGYHMAAAGQDGTLWTWG--LNSYGQLGGGPLSYRLLPVQVQGLMD--- 926

Query: 342  VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACG 400
            V++++ G +H A     G L+T+G  ++G LG G       P +V   +GL +V A A G
Sbjct: 927  VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQV---QGLMSVTAMAAG 983

Query: 401  VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             +H AA  +             G L+TWG    G+LG G     L P  V          
Sbjct: 984  GYHMAAAGQ------------DGTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAA 1031

Query: 461  VSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYH 519
            ++ G S T+A+   G V++ G   YGQLGD   A    P +V+G LT   V  I+ GD H
Sbjct: 1032 IAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQG-LTG--VTAISAGDAH 1088

Query: 520  VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               L     V+ WG+ + G+LG G T  R  P  V+ L    V +I  G+  T A+
Sbjct: 1089 TVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTG--VIAIAAGSLHTVAL 1142



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 156/338 (46%), Gaps = 27/338 (7%)

Query: 221  SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
            S  P  V+   +  V  IA G  H   V + G V+SWG    G+LG G  +    P  + 
Sbjct: 1015 SLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQ 1074

Query: 281  ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
             L  +    ++ G+ HT A+   G ++ WG    ++G LG G       P ++ G L G 
Sbjct: 1075 GLTGVTA--ISAGDAHTVALRRDGTVWAWG--RNSWGQLGDGTTTHRATPVQVQG-LTG- 1128

Query: 341  HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
             V +++ G  HT  +   G ++ +G  ++G LG G     +TP +V  L G+  +  A G
Sbjct: 1129 -VIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGV--IAIAAG 1185

Query: 401  VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
              HT A+ +             G ++ WG  D G+LG G    RL P  V  L       
Sbjct: 1186 SLHTVALRQ------------DGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLT--GVTT 1231

Query: 461  VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYH 519
            ++ G+  T A+   G  +T G  ++GQLGD     +  P +V+G LT   V  +A G  H
Sbjct: 1232 IAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQG-LTG--VSALAAGYAH 1288

Query: 520  VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
              V+     V+ WG  +  +LG+G + DR+ P  VEAL
Sbjct: 1289 TVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEAL 1326



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 160/355 (45%), Gaps = 31/355 (8%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P  V+   +  V  IA GG  A  + + G +++WG    G+LG+G       P+ +  
Sbjct: 262 FTP--VQVLGLTGVTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQG 319

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L  +    +A    HT A+   G ++ WG  N + G LG G     + P ++ G L G  
Sbjct: 320 LTGVTA--IAASGIHTVALRQDGTLWAWG--NNSSGQLGDGTTTVRFTPVQVQG-LTG-- 372

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V++++ G  +T      G ++ +GD  +G LG G      TP +V  L G+  +  A G 
Sbjct: 373 VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGLTGVTAI--AAGY 430

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            +T A            +   G ++ WGD  R +LG G    R  P  V  L       +
Sbjct: 431 LYTVA------------SKQDGTVWAWGDNKRSQLGEGAVSQRHTPGEVQGL--EGITAI 476

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHV 520
           +  + LTVA+   G V+  G    GQLGD     +L P +V+G      V  +A  DYH+
Sbjct: 477 AASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTRRLTPVQVQGLAG---VTAVAASDYHL 533

Query: 521 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             +     V+ WG G  G+LG G   DR+ P  V+ L    V +I  G++ T A+
Sbjct: 534 VAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLTG--VTAIAAGSNHTVAL 586



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 159/361 (44%), Gaps = 31/361 (8%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G  +  F P  V+   +  V  +A G  H+A + + G V++WG+ L G+LG G  +    
Sbjct: 156 GTSIQRFSPVQVQG--LTGVTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLT 213

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
           P  +  L    V  ++  +  T A+   G ++ WG  N + G LG G     + P ++ G
Sbjct: 214 PVQVQGLT--GVIAISANDSETVALRQDGTVWAWG--NNSSGQLGDGTTTVRFTPVQVLG 269

Query: 336 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
            L G  V++++ G      +   G L+ +G  + G LG+G       P +V  L G+  +
Sbjct: 270 -LTG--VTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLTGVTAI 326

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
            AA G+ HT A+ +             G L+ WG+   G+LG G    R  P  V  L  
Sbjct: 327 -AASGI-HTVALRQ------------DGTLWAWGNNSSGQLGDGTTTVRFTPVQVQGLT- 371

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA 514
                ++ G+  TVA    G V+  G   +GQLGD     +L P +V+G LT   V  IA
Sbjct: 372 -GVTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQG-LTG--VTAIA 427

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G  +         V+ WG     +LG G    R+ P  V+ L+   + +I      T A
Sbjct: 428 AGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQRHTPGEVQGLEG--ITAIAASNLLTVA 485

Query: 575 I 575
           +
Sbjct: 486 V 486



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 148/337 (43%), Gaps = 31/337 (9%)

Query: 239 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           A  G H   V + G V++WG    G+LG G  +    P  +          +A G +HT 
Sbjct: 79  AGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQV----MTGATAIAAGIYHTV 134

Query: 299 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
           A +  G ++TWG ++   G LG G  +  + P ++ G L G  V++V+ G  H+A +   
Sbjct: 135 AASQDGTVWTWGRNSS--GQLGDGTSIQRFSPVQVQG-LTG--VTAVAAGRNHSAALGQG 189

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
           G ++T+GD   G LG G      TP +V  L G+  + A                S + +
Sbjct: 190 GTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLTGVIAISAND--------------SETVA 235

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
               G ++ WG+   G+LG G    R  P  V  L       ++ G    VAL   G ++
Sbjct: 236 LRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLT--GVTAIAAGGGFAVALRQDGTLW 293

Query: 479 TMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
             GS   GQLG+    G   P +V+G LT   V  IA    H   L     ++ WG  ++
Sbjct: 294 AWGSNSRGQLGNGTTFGSYRPEQVQG-LTG--VTAIAASGIHTVALRQDGTLWAWGNNSS 350

Query: 538 GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G+LG G T  R  P  V+ L    V +I  G  +T A
Sbjct: 351 GQLGDGTTTVRFTPVQVQGLTG--VTAIAAGYLYTVA 385



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 152/342 (44%), Gaps = 29/342 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V  IA G  +     + G V++WG+    +LG G  S    P  +  L+ I    +A   
Sbjct: 423 VTAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQRHTPGEVQGLEGITA--IAASN 480

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
             T AV   G ++ WG  +   G LG G       P ++ G L G  V++V+   +H   
Sbjct: 481 LLTVAVRQDGTVWAWG--DNARGQLGDGTTTRRLTPVQVQG-LAG--VTAVAASDYHLVA 535

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           V   G ++ +G G +G LG G  +  STP +V  L G+  + A     HT A+ +     
Sbjct: 536 VRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLTGVTAIAAGSN--HTVALRQ----- 588

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                   G ++ WG  + G+LG G     L P  V  +       ++ G S TVAL   
Sbjct: 589 -------DGTVWAWGFNNYGQLGDGTTAGHLTPVQVPGVT--GAVAIAAGGSHTVALLQD 639

Query: 475 GHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           G V+T G  ++GQLGD     +  P +V+G      V  IA  + H   +     V+TWG
Sbjct: 640 GTVWTWGYNIWGQLGDGTTTHRHSPVQVQGLAD---VIAIATNNGHTVAVRQDGTVWTWG 696

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             ++G+LG G T  R  P  V  L D    +I+  +S T A+
Sbjct: 697 LNSSGQLGDGTTTQRLTPVQVHGLTDA--TAILTSSSQTVAM 736



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 151/355 (42%), Gaps = 31/355 (8%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P  V+   +  V  IA G  +     + G V++WG+   G+LG G  +    P  +  
Sbjct: 362 FTPVQVQG--LTGVTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQG 419

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L  +    +A G  +T A    G ++ WG +  +   LG G       P ++ G LEGI 
Sbjct: 420 LTGVTA--IAAGYLYTVASKQDGTVWAWGDNKRS--QLGEGAVSQRHTPGEVQG-LEGI- 473

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
            ++++     T  V   G ++ +GD   G LG G      TP +V  L G+  V A+   
Sbjct: 474 -TAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTRRLTPVQVQGLAGVTAVAASD-- 530

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
           +H  AV +             G ++ WG G  G+LG G    R  P  V  L       +
Sbjct: 531 YHLVAVRQ------------DGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLT--GVTAI 576

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHV 520
           + G + TVAL   G V+  G   YGQLGD    G L P +V G         IA G  H 
Sbjct: 577 AAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPVQVPGV---TGAVAIAAGGSHT 633

Query: 521 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             L     V+TWG    G+LG G T  R+ P  V+ L D  V +I      T A+
Sbjct: 634 VALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQGLAD--VIAIATNNGHTVAV 686



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 149/337 (44%), Gaps = 29/337 (8%)

Query: 216  GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
            G    S  P  V+   +  V  I+ G  H   + + G V++WG    G+LG G  +  + 
Sbjct: 1062 GTTAQSLTPVQVQG--LTGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRAT 1119

Query: 276  PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 335
            P  +  L    V  +A G  HT A+   G ++ WG    ++G LG G       P ++ G
Sbjct: 1120 PVQVQGLTG--VIAIAAGSLHTVALRQDGTVWAWG--RNSWGQLGDGTTTHRATPVQVQG 1175

Query: 336  PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
             L G  V +++ G  HT  +   G ++ +G    G LG G      TP +V  L G+ T+
Sbjct: 1176 -LTG--VIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLTGVTTI 1232

Query: 396  RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
              A G +HTAAV +             G  +TWG    G+LG G    R  P  V  L  
Sbjct: 1233 --AAGYFHTAAVRQ------------DGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLT- 1277

Query: 456  PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIA 514
                 ++ G++ TV +   G V+  G+    QLG+  +  +  P +VE  LT  F   +A
Sbjct: 1278 -GVSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVE-ALTGAF--SLA 1333

Query: 515  CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
             G +H   ++     + WG+   G++G G T DR  P
Sbjct: 1334 AGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTADRPTP 1370



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 155/386 (40%), Gaps = 43/386 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG    DG LG          G     F P  V +        IA G  H    +
Sbjct: 92  GTVWAWGNND-DGQLG---------DGTTTRRFSPVQVMTGATA----IAAGIYHTVAAS 137

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
           + G V++WG    G+LG G       P  +  L  +    VA G +H+ A+   G ++TW
Sbjct: 138 QDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTGVTA--VAAGRNHSAALGQGGTVWTW 195

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
           G  +   G LG G       P ++ G L G  V ++S     T  +   G ++ +G+ + 
Sbjct: 196 G--DNLVGQLGDGTSTQRLTPVQVQG-LTG--VIAISANDSETVALRQDGTVWAWGNNSS 250

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LG G      TP +V  L G+  + A  G               + +    G L+ WG
Sbjct: 251 GQLGDGTTTVRFTPVQVLGLTGVTAIAAGGGF--------------AVALRQDGTLWAWG 296

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
              RG+LG+G       P  V  L        S  H  TVAL   G ++  G+   GQLG
Sbjct: 297 SNSRGQLGNGTTFGSYRPEQVQGLTGVTAIAASGIH--TVALRQDGTLWAWGNNSSGQLG 354

Query: 490 DPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
           D     +  P +V+G LT   V  IA G  +         V+ WG    G+LG G T  R
Sbjct: 355 DGTTTVRFTPVQVQG-LTG--VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRR 411

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAA 574
             P  V+ L    V +I  G  +T A
Sbjct: 412 LTPVQVQGLTG--VTAIAAGYLYTVA 435



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 145/342 (42%), Gaps = 25/342 (7%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           DV  IA    H   V + G V++WG    G+LG G  +    P  +  L +    L +  
Sbjct: 672 DVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTSSS 731

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           +  T A+     ++ WG  + ++G LG G       P ++ G ++   V++++ G +H A
Sbjct: 732 Q--TVAMRQDRTLWAWG--DNHWGQLGDGTTTRRLTPVQVQGLMD---VTAMAAGGYHMA 784

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
                G L+T+G  ++G LG G       P +V  L        A G  HT AV +    
Sbjct: 785 AAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQ---- 840

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                    G ++ WG    G+LG G     L P  V      +   ++ G     A   
Sbjct: 841 --------DGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQ 892

Query: 474 TGHVYTMGSPVYGQL-GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            G ++T G   YGQL G P +   LP +V+G +    V  +A G YH+A       ++TW
Sbjct: 893 DGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLMD---VTAMAAGGYHMAAAGQDGTLWTW 949

Query: 533 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           G  + G+LG G    R  P  V+ L    V ++  G    AA
Sbjct: 950 GLNSYGQLGGGPLSYRLLPVQVQGLMS--VTAMAAGGYHMAA 989



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 145/328 (44%), Gaps = 29/328 (8%)

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           V + G V++WG+   G+LG G  +    P  +  L  +    VA  ++H  AV   G ++
Sbjct: 486 VRQDGTVWAWGDNARGQLGDGTTTRRLTPVQVQGLAGVTA--VAASDYHLVAVRQDGTVW 543

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            WG     +G LG G  M    P ++ G L G  V++++ G  HT  +   G ++ +G  
Sbjct: 544 AWG--VGFWGQLGDGTGMDRSTPVQVQG-LTG--VTAIAAGSNHTVALRQDGTVWAWGFN 598

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            +G LG G      TP +V  + G   V  A G  HT A+++             G ++T
Sbjct: 599 NYGQLGDGTTAGHLTPVQVPGVTG--AVAIAAGGSHTVALLQ------------DGTVWT 644

Query: 428 WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 487
           WG    G+LG G    R  P  V  L +      + GH  TVA+   G V+T G    GQ
Sbjct: 645 WGYNIWGQLGDGTTTHRHSPVQVQGLADVIAIATNNGH--TVAVRQDGTVWTWGLNSSGQ 702

Query: 488 LGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
           LGD     +L P +V G      +  +      VA+   RT ++ WG    G+LG G T 
Sbjct: 703 LGDGTTTQRLTPVQVHGLTDATAI--LTSSSQTVAMRQDRT-LWAWGDNHWGQLGDGTTT 759

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            R  P  V+ L D  V ++  G    AA
Sbjct: 760 RRLTPVQVQGLMD--VTAMAAGGYHMAA 785



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 9/165 (5%)

Query: 222  FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
              P  V+   +  V  IA G  H A V + G  ++WG  L G+LG G  +D + P  +  
Sbjct: 1218 LTPAQVQG--LTGVTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQG 1275

Query: 282  LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            L  ++   +A G  HT  V   G ++ WG  N +   LG+G+      P ++   L G  
Sbjct: 1276 LTGVSA--LAAGYAHTVVVGEDGTVWAWG--NNSGTQLGNGSSTDRSTPVQVE-ALTGAF 1330

Query: 342  VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
              S++ G +HT  ++  G  + +G    G +G G      TP  V
Sbjct: 1331 --SLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTADRPTPVNV 1373



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 8/109 (7%)

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
           T+A+   G V+  G+   GQLGD     +  P +V    T      IA G YH    +  
Sbjct: 85  TLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQVMTGATA-----IAAGIYHTVAASQD 139

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             V+TWG+ ++G+LG G +  R  P  V+ L    V ++  G + +AA+
Sbjct: 140 GTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTG--VTAVAAGRNHSAAL 186


>gi|330797026|ref|XP_003286564.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
 gi|325083469|gb|EGC36921.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
          Length = 1440

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 162/344 (47%), Gaps = 54/344 (15%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           ++SWG+   G   H +D    +P     L ++N++ ++ G +H+ A+ ++ +   WG   
Sbjct: 4   LYSWGKGKTGNTCHNIDK--KYPSPPSVLISLNLDQLSIGPNHSAAI-VNNECLMWGE-- 58

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
               ++G  +     +  K         V SVSCG  HT ++TS  ++F+ G    G LG
Sbjct: 59  ----VMGRKHTTLFKIVWKR-------RVVSVSCGFNHTLLLTSEYKIFSMGFNQVGQLG 107

Query: 374 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
             + +  + P  VD+L+    ++   G   +AA+ +             G L+ WG    
Sbjct: 108 IENVVDSAVPLPVDTLQKCNVIKIKAGNNISAAITD------------KGDLYIWGTSSF 155

Query: 434 GRLGHGD---KEARLVPTCVAALVEP---------------NFCQVSCGHSLTVALTTTG 475
           G+LG+G    K  + +PT +   +EP                +  V  G   T+A++TTG
Sbjct: 156 GQLGNGKMNPKSNQFIPTTI---LEPFISEQEKDNPIYQNIQYSNVCFGAQHTIAVSTTG 212

Query: 476 HVYTMGSPVYGQLGDPKANGKL---PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 532
            +++ GS  YGQLG    N KL   P R     T+  V +IA G++H ++LT   +VY W
Sbjct: 213 TIFSWGSNQYGQLGLGHCNTKLVPVPVRFNRHSTR-IVVDIASGNFHSSLLTLEGDVYLW 271

Query: 533 GKGANGRLGHGDTDDRNFPSLVE-ALKDKQVKSIVCGTSFTAAI 575
           G    G+LG GDT D N P  V+ +++ K++  +  G + T  +
Sbjct: 272 GSNQYGQLGQGDTIDLNVPKKVKGSIEFKKINRMALGNNHTILL 315



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 156/358 (43%), Gaps = 47/358 (13%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 278
           +D   P      + L++  ++ G  H+A +    E   WGE +G +          H  L
Sbjct: 19  IDKKYPSPPSVLISLNLDQLSIGPNHSAAIV-NNECLMWGEVMGRK----------HTTL 67

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 338
              +    V  V+CG +HT  +T    +++ G +    G LG  N +   +P  ++  L+
Sbjct: 68  FKIVWKRRVVSVSCGFNHTLLLTSEYKIFSMGFNQV--GQLGIENVVDSAVPLPVD-TLQ 124

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---------ISVSTP----RE 385
             +V  +  G   +A +T  G L+ +G  +FG LG+G            ++  P    +E
Sbjct: 125 KCNVIKIKAGNNISAAITDKGDLYIWGTSSFGQLGNGKMNPKSNQFIPTTILEPFISEQE 184

Query: 386 VDS--LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA 443
            D+   + ++      G  HT AV             ++G +F+WG    G+LG G    
Sbjct: 185 KDNPIYQNIQYSNVCFGAQHTIAV------------STTGTIFSWGSNQYGQLGLGHCNT 232

Query: 444 RLVPTCVAALVEPN--FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTR 500
           +LVP  V            ++ G+  +  LT  G VY  GS  YGQLG     +  +P +
Sbjct: 233 KLVPVPVRFNRHSTRIVVDIASGNFHSSLLTLEGDVYLWGSNQYGQLGQGDTIDLNVPKK 292

Query: 501 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN---FPSLVE 555
           V+G +    +  +A G+ H  +LT   +VYT+G     +LGHG    +N   FP+L++
Sbjct: 293 VKGSIEFKKINRMALGNNHTILLTKDQDVYTFGNNEFYQLGHGSMGGKNKIYFPTLIQ 350


>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 160/331 (48%), Gaps = 37/331 (11%)

Query: 226 AVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDALKN 284
           AV++    +V ++  G R++  + + G++F+WG    G LGH  ++   + P  + AL N
Sbjct: 32  AVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALAN 91

Query: 285 INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM----------SLWLPKKLN 334
             +   A G  H  AV   G  Y WGG+   +G  G   E            + +P++  
Sbjct: 92  AKIVQAAIGGWHCLAVDDQGRAYAWGGNE--YGQCGEEPERKDDTGRPLRRDITIPQRCA 149

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
             L    V  V+ G  H+ V+T  G ++T+G         GD   +STP  V  L+ +R 
Sbjct: 150 SKLS---VRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISTPVRVQGLEKVRL 202

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
           +  A G +H  A++E             G L+ WG+ + G+LG GD + R  P  V  L 
Sbjct: 203 I--AVGAFHNLALLE------------DGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLS 248

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEE 512
           +     ++ G   + ALT  G VY  G   +G+LG  D K++  +P +V+  + +N V+ 
Sbjct: 249 DLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQ- 307

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
           I+CG  H   LT    ++++G+G +GRLG+G
Sbjct: 308 ISCGGTHSVALTRDGRMFSFGRGDHGRLGYG 338



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 129/282 (45%), Gaps = 42/282 (14%)

Query: 223 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD--SDVSHPKLID 280
           +P  V++     +   A GG H   V  QG  ++WG    G+ G   +   D   P   D
Sbjct: 82  IPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRD 141

Query: 281 ------ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP---K 331
                     ++V  VA G  H+  +T  G ++TWG                 W P   K
Sbjct: 142 ITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWG---------------QPWPPGDIK 186

Query: 332 KLNGPL--EGIH-VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS 388
           +++ P+  +G+  V  ++ G +H   +   G L+ +G+  +G LG GD    S P  V  
Sbjct: 187 QISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQPIAVQG 246

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD-KEARLVP 447
           L  L  V  A G WH+ A+ +             G ++ WG G+ GRLG GD K +++VP
Sbjct: 247 LSDLTLVDIAAGGWHSTALTD------------DGGVYGWGRGEHGRLGFGDDKSSKMVP 294

Query: 448 TCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
             V  LVE N  Q+SCG + +VALT  G +++ G   +G+LG
Sbjct: 295 QKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLG 336



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 149/339 (43%), Gaps = 31/339 (9%)

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
           + +K   + SWG    G+LG G + +      + AL   NV  V  G  ++ A+   G +
Sbjct: 1   MASKPKAIISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKL 60

Query: 307 YTWGGSNCNFGLLGHGNEMSLW-LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           +TWG +    G LGH  E     +P ++   L    +   + G WH   V   G+ + +G
Sbjct: 61  FTWGWNQ--RGTLGHPPETKTENIPSQVKA-LANAKIVQAAIGGWHCLAVDDQGRAYAWG 117

Query: 366 DGTFGVLGHGDRISVSTPREVDSLKGLR---TVRAACGVWHTAAVVEVMVGSSSSSNCS- 421
              +G  G          R+ D+ + LR   T+   C      +V +V  G + S   + 
Sbjct: 118 GNEYGQCGE------EPERKDDTGRPLRRDITIPQRCA--SKLSVRQVAAGGTHSVVLTR 169

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            G ++TWG         GD +    P  V  L +     V   H+L  AL   G ++  G
Sbjct: 170 EGHVWTWGQ----PWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNL--ALLEDGILWAWG 223

Query: 482 SPVYGQLG----DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
           +  YGQLG     P++    P  V+G L+   + +IA G +H   LT    VY WG+G +
Sbjct: 224 NNEYGQLGTGDTQPRSQ---PIAVQG-LSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEH 279

Query: 538 GRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           GRLG G D   +  P  V+ L ++ +  I CG + + A+
Sbjct: 280 GRLGFGDDKSSKMVPQKVQLLVEENIVQISCGGTHSVAL 318



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 37/270 (13%)

Query: 217 VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
           ++ D  +P+   S   L V+ +A GG H+ ++T++G V++WG+        G    +S P
Sbjct: 138 LRRDITIPQRCASK--LSVRQVAAGGTHSVVLTREGHVWTWGQPWP----PGDIKQISTP 191

Query: 277 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
             +  L+   V L+A G  H  A+   G ++ WG  N  +G LG G+      P  + G 
Sbjct: 192 VRVQGLEK--VRLIAVGAFHNLALLEDGILWAWG--NNEYGQLGTGDTQPRSQPIAVQG- 246

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTV 395
           L  + +  ++ G WH+  +T  G ++ +G G  G LG GD + S   P++V  L     V
Sbjct: 247 LSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEENIV 306

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
           + +CG  H+ A+               G++F++G GD GRLG+G K     P  V   + 
Sbjct: 307 QISCGGTHSVALTR------------DGRMFSFGRGDHGRLGYGRKVTTGHPMEVPINLP 354

Query: 456 P-----------NFCQ--VSCGHSLTVALT 472
           P           ++C   V+CG   T+A+ 
Sbjct: 355 PATNLSGSGAGGHWCSKLVACGGRHTLAIV 384



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 17/191 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ IA G  H   + + G +++WG    G+LG G     S P  +  L ++ +  +A G 
Sbjct: 200 VRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSDLTLVDIAAGG 259

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEGIHVSSVSCGPWHTA 353
            H+ A+T  G +Y WG      G LG G++ S   +P+K+   +E  ++  +SCG  H+ 
Sbjct: 260 WHSTALTDDGGVYGWG--RGEHGRLGFGDDKSSKMVPQKVQLLVE-ENIVQISCGGTHSV 316

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV-------DSLKG------LRTVRAACG 400
            +T  G++F+FG G  G LG+G +++   P EV        +L G        +   ACG
Sbjct: 317 ALTRDGRMFSFGRGDHGRLGYGRKVTTGHPMEVPINLPPATNLSGSGAGGHWCSKLVACG 376

Query: 401 VWHTAAVVEVM 411
             HT A+VE +
Sbjct: 377 GRHTLAIVEWL 387



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 22/125 (17%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG          G H    +   K    VP+ V+  V  ++  I+CGG H+  +T
Sbjct: 269 GGVYGWGR---------GEHGRLGFGDDKSSKMVPQKVQLLVEENIVQISCGGTHSVALT 319

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLI-------------DALKNINVELVACGEHH 296
           + G +FS+G    GRLG+G      HP  +              A  +   +LVACG  H
Sbjct: 320 RDGRMFSFGRGDHGRLGYGRKVTTGHPMEVPINLPPATNLSGSGAGGHWCSKLVACGGRH 379

Query: 297 TCAVT 301
           T A+ 
Sbjct: 380 TLAIV 384


>gi|196002709|ref|XP_002111222.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
 gi|190587173|gb|EDV27226.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
          Length = 575

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 174/406 (42%), Gaps = 63/406 (15%)

Query: 203 ILGGGIHRSGSYAGVKMDS---FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 259
           +   G +R     G+ +      VP   E    L    +  G     +VT  G ++  G 
Sbjct: 181 VYAWGANRYSQLGGINLKEDTVLVPTVNEIMSNLKPNMMTAGLGCTFIVTNDGCIYVCGH 240

Query: 260 ELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGL 318
              GRLG G  + V  P+ I     I  V    CG+H   A+T +G + +WG +   +G 
Sbjct: 241 GQDGRLGLGTVNHVVIPRPIHLKVFITKVASFYCGQH-ALALTGNGIVLSWGSNI--YGQ 297

Query: 319 LGHGN--------------------------EMSLWLPKKLN-GPLEGIHVSSVSCGPWH 351
           LGHG+                             LW+   +    +   H+  ++CG   
Sbjct: 298 LGHGHCRYFTASQLATMSSCNISKPLLSFFFLNLLWMESYMVIDTISSKHIVDIACGSDS 357

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +A ++ +G+LFT+G G  G LGHGD  +   P++V++ K     + ACG WH  A+V   
Sbjct: 358 SAAISDSGELFTWGCGFQGCLGHGDTETYKLPKKVEAFKDYHVSKVACGCWHMLAIV--- 414

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                    +  ++++WG G  G+LG+G     L P  V  L    + +V CG  ++ AL
Sbjct: 415 ---------NQNRIWSWGHGHYGQLGNGQSANCLQPILVEQLPHILWAKVICGWDISFAL 465

Query: 472 TTTGHVYTMGSPVYGQLGDPKANG---------KLPTRVEGKLTKNFVEEIACGDYHVAV 522
           +  G++++     +G  GD   N          +L  R+  +  K  + ++   + H   
Sbjct: 466 SQDGYIWS-----WGYNGDFMVNECSRLIVDEPQLLYRLADQDKK--IVDLGASNCHCVA 518

Query: 523 LTSRTEVYTWGKGANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVC 567
           L +  E+Y WG    GRLG+G D  D NFP    AL D ++  + C
Sbjct: 519 LAADGELYLWGANDKGRLGNGSDIKDCNFPKPCTALADVKLTHLGC 564



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 47/301 (15%)

Query: 306 MYTWGGSNCNFGLLGHGN--EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           +Y WG +   +  LG  N  E ++ +P  +N  +  +  + ++ G   T +VT+ G ++ 
Sbjct: 181 VYAWGANR--YSQLGGINLKEDTVLVPT-VNEIMSNLKPNMMTAGLGCTFIVTNDGCIYV 237

Query: 364 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 423
            G G  G LG G    V  PR +  LK   T            V     G  + +   +G
Sbjct: 238 CGHGQDGRLGLGTVNHVVIPRPI-HLKVFIT-----------KVASFYCGQHALALTGNG 285

Query: 424 KLFTWGDGDRGRLGHGD------KEARLVPTC----------------------VAALVE 455
            + +WG    G+LGHG        +   + +C                      +  +  
Sbjct: 286 IVLSWGSNIYGQLGHGHCRYFTASQLATMSSCNISKPLLSFFFLNLLWMESYMVIDTISS 345

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIA 514
            +   ++CG   + A++ +G ++T G    G LG       KLP +VE       V ++A
Sbjct: 346 KHIVDIACGSDSSAAISDSGELFTWGCGFQGCLGHGDTETYKLPKKVEA-FKDYHVSKVA 404

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           CG +H+  + ++  +++WG G  G+LG+G + +   P LVE L       ++CG   + A
Sbjct: 405 CGCWHMLAIVNQNRIWSWGHGHYGQLGNGQSANCLQPILVEQLPHILWAKVICGWDISFA 464

Query: 575 I 575
           +
Sbjct: 465 L 465


>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 169/364 (46%), Gaps = 50/364 (13%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           +ACGG H   +T  G+V +WG    G+LGHG       PK +  L++  +  V+ G  H+
Sbjct: 53  LACGGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHS 112

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
             V+ +G ++T G  + +FG LGHG+  S   P K++   +  HV  ++CG  H+ V+  
Sbjct: 113 GFVSDTGCLFTCG--DGSFGQLGHGDCKSHCSPVKVS-YFDSKHVDQIACGMRHSLVLLK 169

Query: 358 AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 415
             Q++ FG G  G LG    +  S+S P+    L+G+  +       H+AA+        
Sbjct: 170 GDQVYGFGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAAL-------- 221

Query: 416 SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
                ++G L+TWG       G G       P C+ + +   F QV+ G +  + LT  G
Sbjct: 222 ----SANGHLYTWGR------GFGSTSDVHCPRCLPSSL--CFTQVALGWNHMLVLTGGG 269

Query: 476 HVYTMGSPVYGQLGDPKANGKLP--------------------TRVEGKLTKNFVEEIAC 515
            V+ +G   +G LGDP+   ++                      +V+G    N V +IA 
Sbjct: 270 EVFMLGGNRHGVLGDPQKGSQVKHLSVIEVFLHGPEESREENLEKVQGLDGLNVV-QIAA 328

Query: 516 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK----DKQVKSIVCGTSF 571
           G  H A++T    + TWG G +G+LG G+T D+  P  V           +  + CG+ F
Sbjct: 329 GAEHSALVTENRVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGF 388

Query: 572 TAAI 575
           T AI
Sbjct: 389 TFAI 392



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ------VSCGHSLTVALTTTGHV 477
           ++++WG G  G+LG    E   +P     L  P F        ++CG +  +ALTT G V
Sbjct: 13  EIWSWGAGTDGQLGTTRLEDEHLPQL---LDLPRFSSAGPISLLACGGAHVLALTTDGKV 69

Query: 478 YTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFV-EEIACGDYHVAVLTSRTEVYTWGKG 535
            T G    GQLG       L P  V  KL ++FV   ++ G  H   ++    ++T G G
Sbjct: 70  VTWGRGTSGQLGHGDMVSSLQPKHV--KLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDG 127

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           + G+LGHGD      P  V     K V  I CG   +  +
Sbjct: 128 SFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVL 167


>gi|443710462|gb|ELU04715.1| hypothetical protein CAPTEDRAFT_111937 [Capitella teleta]
          Length = 689

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 160/350 (45%), Gaps = 39/350 (11%)

Query: 235 VQNIACGGRHAALVTKQGEVFSW-----GEE--LGGRLGHGVDSDVSHPKLIDALKNINV 287
           +  ++ G    A VTK G +  W     G E  + G  G G  + +  P+ ++    + +
Sbjct: 345 ITEVSTGRTQKAAVTKNGRLLLWETPSVGAEPSMPGATGAGGPAFI--PRYLEGQSAVTI 402

Query: 288 ELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSS 344
           + V+CG+  T  +T  G + T+G G+N   G LGHG  N++S     K+   L G  VS 
Sbjct: 403 KHVSCGDLFTACLTDRGILMTFGSGAN---GCLGHGNYNDVS---QAKIVEDLLGFEVSQ 456

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
           VSCG  H   VT+   +F++G G  G LG G + S  +P  V  +   + + A CGV  +
Sbjct: 457 VSCGASHVMAVTNEHDVFSWGRGDNGRLGLGHQESCCSPCRVPLMPETQPISALCGVDCS 516

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG------HGDKEARLVPTCVAALVEPNF 458
             +VE M             LF  G     +L       H ++     P     L     
Sbjct: 517 MLLVEPM-----------STLFCCGSNRYNKLALDRESEHVEEVHSFCPVQSLPLASQAI 565

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG--KLPTRVEGKLTKNFVEEIACG 516
             V+ G S   A+ + G  YT GS  +GQLG P ANG   +PTRV   L+K  V  ++CG
Sbjct: 566 AMVAMGTSHAAAIMSNGECYTFGSNQFGQLGIP-ANGDNNMPTRVL-SLSKIAVSMVSCG 623

Query: 517 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
           D     +    ++Y+WGK A GRLG  D +D     +V     + V S+V
Sbjct: 624 DTFTVAIMKDGKIYSWGKAARGRLGRLDCEDSQPAPVVFKDVGRNVMSVV 673



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 144/342 (42%), Gaps = 48/342 (14%)

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDA-LKNINVELVACGEHHTCAVTLSGDMYTW 309
           Q  V+ WG   GG         +S P L+     + ++  V+ G     AVT +G +  W
Sbjct: 320 QSRVYCWG---GG---------ISAPHLLPLPSSDTHITEVSTGRTQKAAVTKNGRLLLW 367

Query: 310 -----GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
                G      G  G G     ++P+ L G    + +  VSCG   TA +T  G L TF
Sbjct: 368 ETPSVGAEPSMPGATGAGGPA--FIPRYLEGQ-SAVTIKHVSCGDLFTACLTDRGILMTF 424

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G G  G LGHG+   VS  + V+ L G    + +CG  H  AV             +   
Sbjct: 425 GSGANGCLGHGNYNDVSQAKIVEDLLGFEVSQVSCGASHVMAVT------------NEHD 472

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN----FCQVSCGHSLTVALTTTGHVYTM 480
           +F+WG GD GRLG G +E+   P  V  + E       C V C   L   ++T   ++  
Sbjct: 473 VFSWGRGDNGRLGLGHQESCCSPCRVPLMPETQPISALCGVDCSMLLVEPMST---LFCC 529

Query: 481 GSPVYGQLGDPKANGKL-------PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           GS  Y +L   + +  +       P +    L    +  +A G  H A + S  E YT+G
Sbjct: 530 GSNRYNKLALDRESEHVEEVHSFCPVQ-SLPLASQAIAMVAMGTSHAAAIMSNGECYTFG 588

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               G+LG     D N P+ V +L    V  + CG +FT AI
Sbjct: 589 SNQFGQLGIPANGDNNMPTRVLSLSKIAVSMVSCGDTFTVAI 630



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 28/279 (10%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
           +F+P+ +E    + +++++CG    A +T +G + ++G    G LGHG  +DVS  K+++
Sbjct: 388 AFIPRYLEGQSAVTIKHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNYNDVSQAKIVE 447

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            L    V  V+CG  H  AVT   D+++WG G N   G LG G++ S   P ++    E 
Sbjct: 448 DLLGFEVSQVSCGASHVMAVTNEHDVFSWGRGDN---GRLGLGHQESCCSPCRVPLMPET 504

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG------HGDRISVSTPREVDSLKGLR 393
             +S++        +V     LF  G   +  L       H + +    P +   L    
Sbjct: 505 QPISALCGVDCSMLLVEPMSTLFCCGSNRYNKLALDRESEHVEEVHSFCPVQSLPLASQA 564

Query: 394 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG---HGDKEARLVPTCV 450
               A G  H AA++            S+G+ +T+G    G+LG   +GD     +PT V
Sbjct: 565 IAMVAMGTSHAAAIM------------SNGECYTFGSNQFGQLGIPANGDNN---MPTRV 609

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            +L +     VSCG + TVA+   G +Y+ G    G+LG
Sbjct: 610 LSLSKIAVSMVSCGDTFTVAIMKDGKIYSWGKAARGRLG 648



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 19/155 (12%)

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYG-QLGDPKANGK-----LPTRVEGKLTKNFVEEI 513
           +VS G +   A+T  G +    +P  G +   P A G      +P  +EG+ +   ++ +
Sbjct: 347 EVSTGRTQKAAVTKNGRLLLWETPSVGAEPSMPGATGAGGPAFIPRYLEGQ-SAVTIKHV 405

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
           +CGD   A LT R  + T+G GANG LGHG+ +D +   +VE L   +V  + CG S   
Sbjct: 406 SCGDLFTACLTDRGILMTFGSGANGCLGHGNYNDVSQAKIVEDLLGFEVSQVSCGASHVM 465

Query: 574 AIC----LHKWVSGVD--------QSMCSGCRIPF 596
           A+     +  W  G +        +S CS CR+P 
Sbjct: 466 AVTNEHDVFSWGRGDNGRLGLGHQESCCSPCRVPL 500


>gi|363741143|ref|XP_415822.3| PREDICTED: serine/threonine-protein kinase Nek8 [Gallus gallus]
          Length = 698

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 150/355 (42%), Gaps = 50/355 (14%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG--- 310
           +++WG         G+ + +  P L     N  V  V+ G      VT SG +  W    
Sbjct: 320 IYTWGS--------GITTPLRLPML-----NTEVVQVSAGRTQKAGVTKSGRLIMWEAPP 366

Query: 311 -GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            G+     L G   ++      +      G+ +  VSCG   TA +T  G + TFG G+ 
Sbjct: 367 MGTAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSN 426

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LGHG+   VS P+ V++L G   V+ ACG  H  AV          SN    ++F WG
Sbjct: 427 GCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAV----------SN--EREVFAWG 474

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            GD GRLG G  E    P  VA   E    +V CG   ++ LT    +   GS    +LG
Sbjct: 475 RGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLG 534

Query: 490 DPKANGKLPTRVEGKLTKNFV-----------EEIACGDY---HVAVLTSRTEVYTWGKG 535
             + +       E ++ +  V           E + C D    H A +T+  + YT+G  
Sbjct: 535 LDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSN 594

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCS 590
            +G+LG     +   P LV  L+  +V  + CG +FT AI       G D  +C+
Sbjct: 595 QHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAI-------GADGEVCT 642



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 154/349 (44%), Gaps = 23/349 (6%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSW---------GEELGGRLGHGVDSDVSHPKLIDALKN 284
           +V  ++ G    A VTK G +  W         G  L G         VS  + ++    
Sbjct: 339 EVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVS--RFLEGQSG 396

Query: 285 INVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           + ++ V+CG+  T  +T  G + T+G GSN   G LGHGN   +  PK +   L G  + 
Sbjct: 397 VTIKHVSCGDLFTACLTDRGIIMTFGSGSN---GCLGHGNFTDVSQPKIVEA-LLGYEMV 452

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            V+CG  H   V++  ++F +G G  G LG G     ++P++V         R  CG+  
Sbjct: 453 QVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDS 512

Query: 404 TAAV-VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV--EPNFCQ 460
           +  + V   + +  S+ C+   L      +        +EA +     +A +  EP  C 
Sbjct: 513 SMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVC- 571

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYH 519
              G + + A+T +G  YT GS  +GQLG     N ++P  V G L    V  +ACGD  
Sbjct: 572 ADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVG-LRAMKVTVVACGDAF 630

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDD-RNFPSLVEALKDKQVKSIVC 567
              + +  EV TWGKGA GRLG  D +     P  +E      V S+ C
Sbjct: 631 TVAIGADGEVCTWGKGARGRLGRKDEETGMPRPVQLEETHPYVVTSVAC 679



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 139/299 (46%), Gaps = 10/299 (3%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           FV + +E    + +++++CG    A +T +G + ++G    G LGHG  +DVS PK+++A
Sbjct: 386 FVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEA 445

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
           L    +  VACG  H  AV+   +++ WG G N   G LG G       P+++  P E  
Sbjct: 446 LLGYEMVQVACGASHVLAVSNEREVFAWGRGDN---GRLGLGTLECHNSPQQVAVPPEH- 501

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAA- 398
               V CG   + V+T   Q+   G      LG  DRI S   P   D ++       A 
Sbjct: 502 EAQRVICGIDSSMVLTVNNQILACGSNRCNKLGL-DRISSAEEPSPEDQVEEATVFTCAQ 560

Query: 399 CGVWHTAAVVEVMVGSS-SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
               +   VV   +G++ S++  +SG+ +T+G    G+LG        VP  V  L    
Sbjct: 561 SAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMK 620

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF-VEEIAC 515
              V+CG + TVA+   G V T G    G+LG       +P  V+ + T  + V  +AC
Sbjct: 621 VTVVACGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGMPRPVQLEETHPYVVTSVAC 679


>gi|30682540|ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|26452773|dbj|BAC43467.1| unknown protein [Arabidopsis thaliana]
 gi|28973187|gb|AAO63918.1| putative UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|332003957|gb|AED91340.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 434

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 182/390 (46%), Gaps = 51/390 (13%)

Query: 218 KMDSFVPKAVESAVV-LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSH 275
            +DS    AV SA+    +  +ACGG H   +T+   VF+ G    G+LG   V S    
Sbjct: 66  NLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMD 125

Query: 276 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKL 333
           P  +  L   ++  ++ G +H+ A+T+ G++Y WG ++   G LG G + +  + +P K+
Sbjct: 126 PLEVSGLDK-DILHISAGYYHSAAITVDGELYMWGKNSS--GQLGLGKKAARVVRVPTKV 182

Query: 334 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG------------DGTFGVLGHGDRISVS 381
              L GI + SV+ G  H+  VT  G++ ++G               FG+L         
Sbjct: 183 E-ALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEF--- 238

Query: 382 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
           TPR +  L+G++    A G+ H+A   E            +G  F +G+    ++G G  
Sbjct: 239 TPRLIKELEGIKVTNVAAGLLHSACTDE------------NGSAFMFGEKSINKMGFGGV 286

Query: 442 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTR 500
                P+ ++ +  P   +V+CG   T  +T  G +YT GS   G LG D       P R
Sbjct: 287 RNATTPSIISEV--PYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVR 344

Query: 501 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDR 548
           VEG   ++ V +++CG  H A + S   V+TWG G +            G+LGHG   D 
Sbjct: 345 VEGPFLESTVSQVSCGWKHTAAI-SDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDY 403

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
             P++V+  K+ +   I CG + TAA+  H
Sbjct: 404 ARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 8/160 (5%)

Query: 422 SGKLFT--WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
           SGK F   WG GD GRLG G+ +++  P   +AL + +   V+CG + T+ LT T  V+ 
Sbjct: 46  SGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFA 105

Query: 480 MGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
            G    GQLG  D K++   P  V G L K+ +  I+ G YH A +T   E+Y WGK ++
Sbjct: 106 TGLNDCGQLGVSDVKSHAMDPLEVSG-LDKDIL-HISAGYYHSAAITVDGELYMWGKNSS 163

Query: 538 GRLGHGDTDDR--NFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G+LG G    R    P+ VEAL    ++S+  G+  + A+
Sbjct: 164 GQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAV 203



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 142/325 (43%), Gaps = 17/325 (5%)

Query: 257 WGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 315
           WG    GRLG G +DS  + P +  AL + ++  VACG  HT  +T +  ++  G ++C 
Sbjct: 54  WGSGDYGRLGLGNLDSQWT-PAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDC- 111

Query: 316 FGLLGHGNEMSLWL-PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 374
            G LG  +  S  + P +++G  + I    +S G +H+A +T  G+L+ +G  + G LG 
Sbjct: 112 -GQLGVSDVKSHAMDPLEVSGLDKDI--LHISAGYYHSAAITVDGELYMWGKNSSGQLGL 168

Query: 375 GDRIS--VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           G + +  V  P +V++L G+     A G  H+ AV +   G    S    G         
Sbjct: 169 GKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD---GGEVLSWGGGGSGRLGHGHQ 225

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
               G     +   P  +  L       V+ G   +      G  +  G     ++G   
Sbjct: 226 SSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGG 285

Query: 493 A-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
             N   P+ +       + EE+ACG YH  V+T   E+YTWG   NG LG   T   + P
Sbjct: 286 VRNATTPSIIS---EVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSP 342

Query: 552 SLVEA-LKDKQVKSIVCGTSFTAAI 575
             VE    +  V  + CG   TAAI
Sbjct: 343 VRVEGPFLESTVSQVSCGWKHTAAI 367


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 121/214 (56%), Gaps = 15/214 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACG 293
           +  IACG  H+  ++K GE+F+WG+ L G+LG G + + +  P+ ++ L  + +  ++ G
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 167

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           + H+ A+++SG++Y+WG ++   G LG G+      P  L   L+   V  ++CG  HTA
Sbjct: 168 KAHSMALSMSGNVYSWGRND--LGQLGLGHTDGEDFPS-LIETLDNQQVEFLACGGSHTA 224

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           ++T+ G +FTFG G +G LGH    +   PR V  L G R  + ACG  HT A V  +  
Sbjct: 225 LLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDL-- 282

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                    GK+F++G G  G+LG+G    +L+P
Sbjct: 283 ---------GKVFSFGSGKEGQLGNGGTHNQLIP 307



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 111/212 (52%), Gaps = 14/212 (6%)

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACG 400
           +  ++CG +H+  ++  G+LF +G    G LG G    S+ TP+ V+ L G+  V+ + G
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 167

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
             H+ A+              SG +++WG  D G+LG G  +    P+ +  L       
Sbjct: 168 KAHSMAL------------SMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEF 215

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH- 519
           ++CG S T  LTT G V+T G+  YGQLG      +L  R+  +L  N V +IACG  H 
Sbjct: 216 LACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHT 275

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
           +A ++   +V+++G G  G+LG+G T ++  P
Sbjct: 276 LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 307



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 27/237 (11%)

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           + + SV  G  H  +++S G+ F +              S+   R    L+    ++ AC
Sbjct: 66  MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQIAC 113

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNF 458
           G +H+ A+               G+LF WG    G+LG G   A +  P  V  L     
Sbjct: 114 GDYHSLAL------------SKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPL 161

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGD 517
            Q+S G + ++AL+ +G+VY+ G    GQLG    +G+  P+ +E  L    VE +ACG 
Sbjct: 162 VQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIE-TLDNQQVEFLACGG 220

Query: 518 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            H A+LT+   V+T+G G  G+LGH  T +   P LV  L   +V  I CG   T A
Sbjct: 221 SHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLA 277



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 13/187 (6%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G++F WG+    G LG G      +A +      P+AVE    + +  I+ G  H+  ++
Sbjct: 125 GELFAWGQ-NLHGQLGVG----RLFASIP----TPQAVEHLSGVPLVQISAGKAHSMALS 175

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
             G V+SWG    G+LG G       P LI+ L N  VE +ACG  HT  +T  G ++T+
Sbjct: 176 MSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTF 235

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGT 368
           G     +G LGH +  +   P +L   L G  V+ ++CG  HT A V+  G++F+FG G 
Sbjct: 236 GAG--KYGQLGHNSTQNELRP-RLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGK 292

Query: 369 FGVLGHG 375
            G LG+G
Sbjct: 293 EGQLGNG 299



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 126/267 (47%), Gaps = 29/267 (10%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           + + ++  G  H  +++  G+ F +            +  + H +    L+  ++  +AC
Sbjct: 66  MKIHSVDQGAEHMLILSSDGKPFEY------------NYSIEHARFQCILQEKSIIQIAC 113

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIHVSSVSCGPWH 351
           G++H+ A++  G+++ W G N + G LG G    S+  P+ +   L G+ +  +S G  H
Sbjct: 114 GDYHSLALSKGGELFAW-GQNLH-GQLGVGRLFASIPTPQAVEH-LSGVPLVQISAGKAH 170

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +  ++ +G ++++G    G LG G       P  +++L   +    ACG  HTA +    
Sbjct: 171 SMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT--- 227

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVA- 470
                    + G +FT+G G  G+LGH   +  L P  V  L      Q++CG   T+A 
Sbjct: 228 ---------TDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAY 278

Query: 471 LTTTGHVYTMGSPVYGQLGDPKANGKL 497
           ++  G V++ GS   GQLG+   + +L
Sbjct: 279 VSDLGKVFSFGSGKEGQLGNGGTHNQL 305



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 5/147 (3%)

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           DG      +  + AR    C+  L E +  Q++CG   ++AL+  G ++  G  ++GQLG
Sbjct: 84  DGKPFEYNYSIEHARF--QCI--LQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLG 139

Query: 490 DPKANGKLPT-RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
             +    +PT +    L+   + +I+ G  H   L+    VY+WG+   G+LG G TD  
Sbjct: 140 VGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGE 199

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +FPSL+E L ++QV+ + CG S TA +
Sbjct: 200 DFPSLIETLDNQQVEFLACGGSHTALL 226


>gi|443693194|gb|ELT94624.1| hypothetical protein CAPTEDRAFT_225863 [Capitella teleta]
          Length = 1384

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 146/316 (46%), Gaps = 49/316 (15%)

Query: 290 VACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
           VA G  H   +T+   ++TWG GS    G LGHGN  S  +P  + G L+G  +    CG
Sbjct: 546 VAVGSGHVIVITVERMVFTWGRGSK---GQLGHGNLESCHVPSLVEG-LKGKSIIQARCG 601

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD-------SLKGLRTVRAACGV 401
              +   +  G + T GDGT G LGHGD  S S PR ++       SL  +  V  ACG 
Sbjct: 602 EEFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLIEALLRDQLSLYSVDVVSVACGS 661

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            H       +VGS S       ++FTWG G  GRLG G ++    P  V      +  + 
Sbjct: 662 HHVC-----VVGSES-------EVFTWGRGKNGRLGLGSEQDFCQPQEVTVPDNLSIKEC 709

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-------------------PTRVE 502
            CG   T+ LT  G +   G+    +LG     G L                   P R  
Sbjct: 710 HCGRDGTLLLTDVGSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTEVAEEKIFTPVR-- 767

Query: 503 GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ- 561
            +L ++ V +I+ G +H AV+     VYT+GK + G+LG G++ +++ P  V+A +DK  
Sbjct: 768 -ELCRHRVVDISLGPHHSAVVVEPGHVYTFGKNSKGQLGTGNSKEQDAPIQVKAFEDKPA 826

Query: 562 -VKSIVCGTSFTAAIC 576
            V   +C  +F + IC
Sbjct: 827 FVCKFLCYVAF-SEIC 841



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 114/277 (41%), Gaps = 36/277 (12%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++++A G  H  ++T +  VF+WG    G+LGHG       P L++ LK  ++    CGE
Sbjct: 543 IRDVAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVPSLVEGLKGKSIIQARCGE 602

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE------GIHVSSVSCG 348
             +   + +G + T G      G LGHG+  S   P+ +   L        + V SV+CG
Sbjct: 603 EFSLFASDNGIIMTCGDGTA--GCLGHGDWCSTSRPRLIEALLRDQLSLYSVDVVSVACG 660

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             H  VV S  ++FT+G G  G LG G       P+EV     L      CG   T  + 
Sbjct: 661 SHHVCVVGSESEVFTWGRGKNGRLGLGSEQDFCQPQEVTVPDNLSIKECHCGRDGTLLLT 720

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVP----------------TCVAA 452
           +V            G +   G+ +  +LG   ++  L+                 T V  
Sbjct: 721 DV------------GSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTEVAEEKIFTPVRE 768

Query: 453 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           L       +S G   +  +   GHVYT G    GQLG
Sbjct: 769 LCRHRVVDISLGPHHSAVVVEPGHVYTFGKNSKGQLG 805



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 136/336 (40%), Gaps = 68/336 (20%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           VF WG  +  G LG G   S           VP  VE      +    CG   +   +  
Sbjct: 562 VFTWGRGS-KGQLGHGNLES---------CHVPSLVEGLKGKSIIQARCGEEFSLFASDN 611

Query: 252 GEVFSWGEELGGRLGHGVDSDVSHPKLIDA-------LKNINVELVACGEHHTCAVTLSG 304
           G + + G+   G LGHG     S P+LI+A       L +++V  VACG HH C V    
Sbjct: 612 GIIMTCGDGTAGCLGHGDWCSTSRPRLIEALLRDQLSLYSVDVVSVACGSHHVCVVGSES 671

Query: 305 DMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 363
           +++TWG G N   G LG G+E     P+++  P + + +    CG   T ++T  G +  
Sbjct: 672 EVFTWGRGKN---GRLGLGSEQDFCQPQEVTVP-DNLSIKECHCGRDGTLLLTDVGSMLA 727

Query: 364 FGDGTFGVLGHGDR-------ISVSTPREVDSLKGLRTVRAAC---------GVWHTAAV 407
            G+     LG   R        ++ T  EV   K    VR  C         G  H+A V
Sbjct: 728 CGNNEGNKLGLNHRQGFLMAMKNIFTKTEVAEEKIFTPVRELCRHRVVDISLGPHHSAVV 787

Query: 408 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE-PNFC------- 459
           VE             G ++T+G   +G+LG G+ + +  P  V A  + P F        
Sbjct: 788 VE------------PGHVYTFGKNSKGQLGTGNSKEQDAPIQVKAFEDKPAFVCKFLCYV 835

Query: 460 ----------QVSCGHSLTVALTTTGHVYTMGSPVY 485
                     +V CG S TVA T    +Y  G+ ++
Sbjct: 836 AFSEICSSLQRVRCGESYTVAGTVDNGLYFWGTRLH 871



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 42/67 (62%)

Query: 506 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
           +K  + ++A G  HV V+T    V+TWG+G+ G+LGHG+ +  + PSLVE LK K +   
Sbjct: 539 SKTKIRDVAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVPSLVEGLKGKSIIQA 598

Query: 566 VCGTSFT 572
            CG  F+
Sbjct: 599 RCGEEFS 605


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 126/261 (48%), Gaps = 17/261 (6%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG-DMYTWGGS 312
           V SWG    G+LGHG   D   P  + A    ++  V CG  +T A + SG D+Y+WG  
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG 184

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
           +  FG LGHG+   L++P  +   L+G+ +  +SCG  H   VT   ++ ++G    G L
Sbjct: 185 D--FGRLGHGDPSDLFIPHPIRA-LQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 241

Query: 373 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           G G       P+++ + +G+R    A G  H+ A+ E             G L+ WG G 
Sbjct: 242 GLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE------------DGDLYGWGWGR 289

Query: 433 RGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
            G LG GD   RL+P  V  +       VSCG   T++++++G +YT G   YGQLG   
Sbjct: 290 YGNLGLGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGD 348

Query: 493 ANGKLPTRVEGKLTKNFVEEI 513
               L  R    L+   + ++
Sbjct: 349 FEDCLVPRKVQALSDKLISQV 369



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 124/252 (49%), Gaps = 17/252 (6%)

Query: 317 GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ-LFTFGDGTFGVLGHG 375
           G LGHG+     LP KL+   +G  + SV+CG  +T   + +G+ ++++G G FG LGHG
Sbjct: 134 GQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHG 192

Query: 376 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
           D   +  P  + +L+GLR  + +CG  H  AV                K+ +WG    G 
Sbjct: 193 DPSDLFIPHPIRALQGLRIKQISCGDCHCLAVT------------MENKVLSWGRNQNGE 240

Query: 436 LGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 495
           LG G  +   VP  + A        V+ G   +VA+T  G +Y  G   YG LG    N 
Sbjct: 241 LGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND 300

Query: 496 KL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 554
           +L P +V   +  + +  ++CG  H   ++S   +YT G    G+LGHGD +D   P  V
Sbjct: 301 RLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKV 358

Query: 555 EALKDKQVKSIV 566
           +AL DK +  ++
Sbjct: 359 QALSDKLISQVI 370



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 103/199 (51%), Gaps = 14/199 (7%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           DV+ WG         G   R G   G   D F+P  + +   L ++ I+CG  H   VT 
Sbjct: 177 DVYSWGW--------GDFGRLGH--GDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 226

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           + +V SWG    G LG G   D   P+ I A + I +++VA G  H+ A+T  GD+Y WG
Sbjct: 227 ENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWG 286

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                +G LG G+     +P+K+N  ++G  +  VSCG  HT  ++S+G L+T G   +G
Sbjct: 287 WG--RYGNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYG 342

Query: 371 VLGHGDRISVSTPREVDSL 389
            LGHGD      PR+V +L
Sbjct: 343 QLGHGDFEDCLVPRKVQAL 361



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 98/215 (45%), Gaps = 16/215 (7%)

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           ++G G  G LGHGD      P ++ +  G   V   CG  +T A               S
Sbjct: 127 SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVA------------RSKS 174

Query: 423 GK-LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
           GK +++WG GD GRLGHGD     +P  + AL      Q+SCG    +A+T    V + G
Sbjct: 175 GKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWG 234

Query: 482 SPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
               G+LG     +  +P ++        ++ +A G  H   +T   ++Y WG G  G L
Sbjct: 235 RNQNGELGLGTTKDSHVPQKILA-FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNL 293

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G GDT+DR  P  V    DK V  + CG   T +I
Sbjct: 294 GLGDTNDRLIPEKVNIDGDKIVM-VSCGWRHTISI 327



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 6/165 (3%)

Query: 415 SSSSNCSSGKLF-TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
           +S  N  SG +  +WG G+ G+LGHGD + RL+PT ++A    +   V+CG   TVA + 
Sbjct: 114 NSIQNQVSGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSK 173

Query: 474 TGH-VYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
           +G  VY+ G   +G+LG  DP ++  +P  +   L    +++I+CGD H   +T   +V 
Sbjct: 174 SGKDVYSWGWGDFGRLGHGDP-SDLFIPHPIRA-LQGLRIKQISCGDCHCLAVTMENKVL 231

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +WG+  NG LG G T D + P  + A +  ++K +  G   + AI
Sbjct: 232 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 276



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 486 GQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           GQLG    + +L PT++     ++ V      DY VA   S  +VY+WG G  GRLGHGD
Sbjct: 134 GQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGD 193

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
             D   P  + AL+  ++K I CG     A+ +
Sbjct: 194 PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 226


>gi|85001023|ref|XP_955230.1| chromosome condensation (RCC1 homologue) protein [Theileria
           annulata strain Ankara]
 gi|65303376|emb|CAI75754.1| chromosome condensation (RCC1 homologue) protein, putative
           [Theileria annulata]
          Length = 759

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 193/453 (42%), Gaps = 78/453 (17%)

Query: 168 VSLSSAVSSSSQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKM-----DS 221
           + L + V + S GS H    ++ G ++ WG     G+LG G   +  Y  VK+     D 
Sbjct: 166 IGLRNNVVTISCGSNHTLVTTVDGCMYSWG-VGAYGVLGNG-SVANRYIPVKVIFPYDDI 223

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F+ K             A G RH+  + +QG V+SWG    GRLG G       P LI+ 
Sbjct: 224 FISKC------------AAGSRHSMALDRQGNVWSWGYGGNGRLGLGNTRSYFTPNLIEI 271

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
                V  ++CG+ H+  +   G +YTWG  +C  G LG GN +S  L   +   L+GIH
Sbjct: 272 FDTYEVFQISCGDSHSACLDRFGTVYTWG--SCRGGKLGLGNILSDVLEPTVVESLKGIH 329

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI---SVSTPREVDSLKGLRTVRAA 398
           +  VSCG  +T  ++S G+++ +G  T G     D +   +V  P+ V    G + +   
Sbjct: 330 IIQVSCGTGNTLALSSTGKIYQWGS-TLGFNKQTDGLISHTVYLPQPVVE-TGFKNIFVT 387

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV---- 454
            G +  AA+               G L TWG G   RLGHGD +  ++P  V+ L     
Sbjct: 388 SGPYSFAAINIF------------GDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRMY 435

Query: 455 ----------------------------EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
                                       E    Q++ G S    LT  G VYT G  V  
Sbjct: 436 IDNLLKTYDEAAFKVEDTVENDSINPYDERRIQQIAVGDSHGALLTCNGTVYTWG--VNN 493

Query: 487 QLGDPKANGKLPTRVEGKLTKNF---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
             G   ++  L    E  L  +F   + +IACG  H   +T    +++WG   NG+LGHG
Sbjct: 494 GTGYNSSSEALENYCEPILFNHFSSKITKIACGSSHTLAITINGLLFSWGSNENGQLGHG 553

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
           D  +R  P  V  +++    ++  G   +  IC
Sbjct: 554 DLRNRVVPDSVNTIEN--CINVFAGIDNSGCIC 584



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 169/360 (46%), Gaps = 50/360 (13%)

Query: 235 VQNIACGGRHAALVT-------KQGEVFSWGEELGGRLGHGVDSD--------------- 272
           V  ++CG  H+A++          G VF++G    GRLG+ +D++               
Sbjct: 92  VTQVSCGDYHSAVLVCSSRENMNAGTVFTFGLGNSGRLGYHIDTNSEILSQQIGTDDKDE 151

Query: 273 ------VSHP-KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 325
                 V  P  +   L+N NV  ++CG +HT   T+ G MY+WG     +G+LG+G+  
Sbjct: 152 PSWCTPVPQPVGMSIGLRN-NVVTISCGSNHTLVTTVDGCMYSWGVGA--YGVLGNGSVA 208

Query: 326 SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPRE 385
           + ++P K+  P + I +S  + G  H+  +   G ++++G G  G LG G+  S  TP  
Sbjct: 209 NRYIPVKVIFPYDDIFISKCAAGSRHSMALDRQGNVWSWGYGGNGRLGLGNTRSYFTPNL 268

Query: 386 VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
           ++        + +CG  H+A +               G ++TWG    G+LG G+  + +
Sbjct: 269 IEIFDTYEVFQISCGDSHSACLDRF------------GTVYTWGSCRGGKLGLGNILSDV 316

Query: 446 V-PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV-YGQLGDPKANGK--LPTRV 501
           + PT V +L   +  QVSCG   T+AL++TG +Y  GS + + +  D   +    LP  V
Sbjct: 317 LEPTVVESLKGIHIIQVSCGTGNTLALSSTGKIYQWGSTLGFNKQTDGLISHTVYLPQPV 376

Query: 502 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 561
                KN    +  G Y  A +    ++ TWG G   RLGHGD+ D   P  V  L+ + 
Sbjct: 377 VETGFKNIF--VTSGPYSFAAINIFGDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRM 434



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 177/450 (39%), Gaps = 86/450 (19%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           D  G V+ WG C G G LG G         +  D   P  VES   + +  ++CG  +  
Sbjct: 291 DRFGTVYTWGSCRG-GKLGLG--------NILSDVLEPTVVESLKGIHIIQVSCGTGNTL 341

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSH------PKLIDALKNINVELVACGEHHTCAV 300
            ++  G+++ WG  LG       D  +SH      P +    KNI    V  G +   A+
Sbjct: 342 ALSSTGKIYQWGSTLG--FNKQTDGLISHTVYLPQPVVETGFKNI---FVTSGPYSFAAI 396

Query: 301 TLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLN------------------------- 334
            + GD+ TWG G+      LGHG+     +PK ++                         
Sbjct: 397 NIFGDLLTWGLGTGYR---LGHGDSKDHVIPKFVSYLRTRMYIDNLLKTYDEAAFKVEDT 453

Query: 335 ------GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG--DGTFGVLGHGDRISVSTPREV 386
                  P +   +  ++ G  H A++T  G ++T+G  +GT G     + +       +
Sbjct: 454 VENDSINPYDERRIQQIAVGDSHGALLTCNGTVYTWGVNNGT-GYNSSSEALENYCEPIL 512

Query: 387 DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV 446
            +    +  + ACG  HT A+              +G LF+WG  + G+LGHGD   R+V
Sbjct: 513 FNHFSSKITKIACGSSHTLAIT------------INGLLFSWGSNENGQLGHGDLRNRVV 560

Query: 447 PTCVAAL---------VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL 497
           P  V  +         ++ + C  S  H   +     G ++  GS   G+LG  +     
Sbjct: 561 PDSVNTIENCINVFAGIDNSGCICSVSHE-NMMKDEYGTLWVFGSSTCGKLGLGENMTST 619

Query: 498 PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
                   T   V  +A G  H   LT    +Y  G G+ GRLG GDT   N    V+  
Sbjct: 620 VMTPREITTITGVHSLALGAMHSLALTHDGTLYASGAGSGGRLGTGDT--TNAFVFVQVK 677

Query: 558 KDKQVKSIVCGTSFTAAIC----LHKWVSG 583
            D +  +I  G+S + AI     L+ W  G
Sbjct: 678 TDHKFVAIAAGSSHSLAISMENDLYGWGEG 707



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 123/265 (46%), Gaps = 30/265 (11%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS--DVSHPKLIDALKNINVELVAC 292
           +Q IA G  H AL+T  G V++WG   G       ++  +   P L +   +  +  +AC
Sbjct: 467 IQQIAVGDSHGALLTCNGTVYTWGVNNGTGYNSSSEALENYCEPILFNHFSS-KITKIAC 525

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN------GPLEGIHVSSVS 346
           G  HT A+T++G +++W GSN N G LGHG+  +  +P  +N          GI  S   
Sbjct: 526 GSSHTLAITINGLLFSW-GSNEN-GQLGHGDLRNRVVPDSVNTIENCINVFAGIDNSGCI 583

Query: 347 CGPWHTAVVTS-AGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACGVWH 403
           C   H  ++    G L+ FG  T G LG G+ +  +V TPRE+ ++ G+ ++  A G  H
Sbjct: 584 CSVSHENMMKDEYGTLWVFGSSTCGKLGLGENMTSTVMTPREITTITGVHSL--ALGAMH 641

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
           + A+               G L+  G G  GRLG GD     V   V    +  F  ++ 
Sbjct: 642 SLALTH------------DGTLYASGAGSGGRLGTGDTTNAFV--FVQVKTDHKFVAIAA 687

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQL 488
           G S ++A++    +Y  G   Y  L
Sbjct: 688 GSSHSLAISMENDLYGWGEGKYLTL 712



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 30/262 (11%)

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           TS   + ++G   F  LG G  ++ S  PR +    G R  + +CG +H+A +V      
Sbjct: 53  TSYLNVLSWGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLV-----C 107

Query: 415 SSSSNCSSGKLFTWGDGDRGRLG-HGDKEARLV--------------------PTCVAAL 453
           SS  N ++G +FT+G G+ GRLG H D  + ++                    P  ++  
Sbjct: 108 SSRENMNAGTVFTFGLGNSGRLGYHIDTNSEILSQQIGTDDKDEPSWCTPVPQPVGMSIG 167

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEE 512
           +  N   +SCG + T+  T  G +Y+ G   YG LG+   AN  +P +V       F+ +
Sbjct: 168 LRNNVVTISCGSNHTLVTTVDGCMYSWGVGAYGVLGNGSVANRYIPVKVIFPYDDIFISK 227

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
            A G  H   L  +  V++WG G NGRLG G+T     P+L+E     +V  I CG S +
Sbjct: 228 CAAGSRHSMALDRQGNVWSWGYGGNGRLGLGNTRSYFTPNLIEIFDTYEVFQISCGDSHS 287

Query: 573 AAICLHKWVSGVDQSMCSGCRI 594
           A  CL ++ +      C G ++
Sbjct: 288 A--CLDRFGTVYTWGSCRGGKL 307



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 43/275 (15%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G V+ WG   G G      + S S A   ++++    + +     +  IACG  H   +T
Sbjct: 484 GTVYTWGVNNGTG------YNSSSEA---LENYCEPILFNHFSSKITKIACGSSHTLAIT 534

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS------ 303
             G +FSWG    G+LGHG   +   P  ++ ++N  + + A  ++  C  ++S      
Sbjct: 535 INGLLFSWGSNENGQLGHGDLRNRVVPDSVNTIENC-INVFAGIDNSGCICSVSHENMMK 593

Query: 304 ---GDMYTWGGSNCNFGLLGHGNEM--SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
              G ++ +G S C  G LG G  M  ++  P+++   + G+H  S++ G  H+  +T  
Sbjct: 594 DEYGTLWVFGSSTC--GKLGLGENMTSTVMTPREIT-TITGVH--SLALGAMHSLALTHD 648

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
           G L+  G G+ G LG GD  +     +V +    + V  A G  H+ A+        S  
Sbjct: 649 GTLYASGAGSGGRLGTGDTTNAFVFVQVKTDH--KFVAIAAGSSHSLAI--------SME 698

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL 453
           N     L+ WG+G    L   D++  L PT +  +
Sbjct: 699 N----DLYGWGEGKYLTL---DEDFVLEPTIINTI 726


>gi|428177897|gb|EKX46775.1| hypothetical protein GUITHDRAFT_40435, partial [Guillardia theta
           CCMP2712]
          Length = 312

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 155/323 (47%), Gaps = 24/323 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS--HPKLIDALKNINVELVAC 292
           V  +A GG H   +T  G V + G     +LG G +   +   P+ +  L+   V  +AC
Sbjct: 8   VVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWKRVVEMAC 67

Query: 293 GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
           G+ H     L G +Y+WG GS+   G LG GN  S+  P K++G  E   VS V+ G +H
Sbjct: 68  GDAHNLVRCLDGSVYSWGLGSS---GRLGLGNFKSVPQPCKVSGLGEERCVS-VAAGYYH 123

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD---SLKGLRTVRAACGVWHTAAVV 408
           +  V   G+LF +G+GT G LG G   S   P +V+   + +  R VR   G +H+  + 
Sbjct: 124 SFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRAVRG--GEYHSLGMT 181

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
           +V            G L++WG  + G+LGHGD+E    P  ++ LV       SCG +  
Sbjct: 182 DV------------GSLWSWGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFN 229

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           VA++    V++ G+  YGQLG      ++   +        V  ++CG  HV  L  +  
Sbjct: 230 VAISNGSQVFSWGNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDRKGR 289

Query: 529 VYTWGKGANGRLGHGDTDDRNFP 551
           ++ WG   +G LG GD   R  P
Sbjct: 290 IWAWGCNESGCLGIGDNIPRLAP 312



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 117/266 (43%), Gaps = 14/266 (5%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P+ V +     V  +ACG  H  +    G V+SWG    GRLG G    V  P  +  L 
Sbjct: 51  PQQVSTLRWKRVVEMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGNFKSVPQPCKVSGLG 110

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
                 VA G +H+ AV   G ++ WG   C  G LG G   S   P ++  P  G    
Sbjct: 111 EERCVSVAAGYYHSFAVMEGGKLFAWGNGTC--GQLGTGKFESCCEPVQVEEPGNGQRWR 168

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
           +V  G +H+  +T  G L+++G    G LGHGD      P+ +  L G +    +CG   
Sbjct: 169 AVRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNF 228

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC 463
             A+          SN S  ++F+WG+   G+LGHGDK  ++  T  +    P    VSC
Sbjct: 229 NVAI----------SNGS--QVFSWGNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSC 276

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLG 489
           G    + L   G ++  G    G LG
Sbjct: 277 GGRHVLGLDRKGRIWAWGCNESGCLG 302



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 108/242 (44%), Gaps = 15/242 (6%)

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG--DRISVSTPREVDSLKGLRT 394
           L G HV  V+ G  HT  +T AG++   G      LG G   R +   P++V +L+  R 
Sbjct: 3   LAGHHVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWKRV 62

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV 454
           V  ACG  H                C  G +++WG G  GRLG G+ ++   P  V+ L 
Sbjct: 63  VEMACGDAHNLV------------RCLDGSVYSWGLGSSGRLGLGNFKSVPQPCKVSGLG 110

Query: 455 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEI 513
           E     V+ G+  + A+   G ++  G+   GQLG  K      P +VE          +
Sbjct: 111 EERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRAV 170

Query: 514 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 573
             G+YH   +T    +++WG   +G+LGHGD +    P  +  L   ++    CG +F  
Sbjct: 171 RGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFNV 230

Query: 574 AI 575
           AI
Sbjct: 231 AI 232



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 142/319 (44%), Gaps = 28/319 (8%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGI 340
           L   +V  VA G  HT  +T +G +   G ++C    LG G E     P+      L   
Sbjct: 3   LAGHHVVQVAAGGDHTLFLTDAGRVLACGRNDCY--QLGDGYEGREAGPEPQQVSTLRWK 60

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 400
            V  ++CG  H  V    G ++++G G+ G LG G+  SV  P +V  L   R V  A G
Sbjct: 61  RVVEMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGNFKSVPQPCKVSGLGEERCVSVAAG 120

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 460
            +H+ AV+E             GKLF WG+G  G+LG G  E+   P  V    EP   Q
Sbjct: 121 YYHSFAVME------------GGKLFAWGNGTCGQLGTGKFESCCEPVQVE---EPGNGQ 165

Query: 461 ----VSCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIA 514
               V  G   ++ +T  G +++ G    GQLG  D +  G+ P  +  +L    +   +
Sbjct: 166 RWRAVRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERCGR-PKGIS-ELVGTKISCFS 223

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
           CG      +++ ++V++WG    G+LGHGD  ++   +L        V S+ CG      
Sbjct: 224 CGPNFNVAISNGSQVFSWGNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSCGGRHVLG 283

Query: 575 ICLHK--WVSGVDQSMCSG 591
           +      W  G ++S C G
Sbjct: 284 LDRKGRIWAWGCNESGCLG 302


>gi|356539897|ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 4/176 (2%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ IACGGRH+A++T  G V ++G  L G+ G G   D   P  + +L  I +E VA G 
Sbjct: 305 IKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIRIEGVAAGL 364

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTA 353
            HT   +  GD+Y +GG+   FG LG G + +  +P+ L+ P LE ++V  +SCG  HTA
Sbjct: 365 WHTVCTSADGDVYAFGGN--QFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGARHTA 422

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           ++T  G++F +G   +G LG GD I  + P EV +++G      ACG WHT  + E
Sbjct: 423 LITDNGKVFCWGWNKYGQLGLGDVIDRNIPSEV-TIEGCVAKNVACGWWHTLLLAE 477



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 46/284 (16%)

Query: 270 DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGL---------- 318
           D+  + P L+     + +  VA G  HT A++  G ++ WG G     GL          
Sbjct: 208 DTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 267

Query: 319 --------LGHGNEMSLWLPKK------LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
                     +G ++S  L +        N  + G ++  ++CG  H+AV+T AG + TF
Sbjct: 268 HLVPCINSSSYGKDISASLARGSMSSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTF 327

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G G +G  G G      +P  V SL G+R    A G+WHT                + G 
Sbjct: 328 GWGLYGQCGQGSTDDELSPNCVSSLLGIRIEGVAAGLWHTVC------------TSADGD 375

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCV--AALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           ++ +G    G+LG G  +A  +P  +   +L   N  ++SCG   T  +T  G V+  G 
Sbjct: 376 VYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGARHTALITDNGKVFCWGW 435

Query: 483 PVYGQLG-DPKANGKLPTRV--EGKLTKNFVEEIACGDYHVAVL 523
             YGQLG     +  +P+ V  EG + KN    +ACG +H  +L
Sbjct: 436 NKYGQLGLGDVIDRNIPSEVTIEGCVAKN----VACGWWHTLLL 475



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 117/260 (45%), Gaps = 43/260 (16%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLK------- 390
           G+ ++SV+ G  HT  ++  GQ++ +G G  G LG G RI  VS+P  V  +        
Sbjct: 222 GVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKD 281

Query: 391 --------------------GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
                               G      ACG  H+A + +            +G + T+G 
Sbjct: 282 ISASLARGSMSSDGQNFRVPGSYIKGIACGGRHSAVITD------------AGAVLTFGW 329

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
           G  G+ G G  +  L P CV++L+      V+ G   TV  +  G VY  G   +GQLG 
Sbjct: 330 GLYGQCGQGSTDDELSPNCVSSLLGIRIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGT 389

Query: 491 PKANGK-LPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
                + +P  ++    +N  V+ I+CG  H A++T   +V+ WG    G+LG GD  DR
Sbjct: 390 GGDQAETIPRLLDCPSLENVNVKRISCGARHTALITDNGKVFCWGWNKYGQLGLGDVIDR 449

Query: 549 NFPSLVEALKDKQVKSIVCG 568
           N PS V  ++    K++ CG
Sbjct: 450 NIPSEV-TIEGCVAKNVACG 468



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 92/231 (39%), Gaps = 44/231 (19%)

Query: 376 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
           D    + P  V    G+R    A G  HT A+ ++            G+++ WG G  G+
Sbjct: 207 DDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDI------------GQVWGWGYGGEGQ 254

Query: 436 LGHGDK-----EARLVPTCV----------AALVEPNFCQ--------------VSCGHS 466
           LG G +        LVP C+          A+L   +                 ++CG  
Sbjct: 255 LGLGSRIRMVSSPHLVP-CINSSSYGKDISASLARGSMSSDGQNFRVPGSYIKGIACGGR 313

Query: 467 LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            +  +T  G V T G  +YGQ G    + +L       L    +E +A G +H    ++ 
Sbjct: 314 HSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIRIEGVAAGLWHTVCTSAD 373

Query: 527 TEVYTWGKGANGRLGHGDTDDRNFPSLVE--ALKDKQVKSIVCGTSFTAAI 575
            +VY +G    G+LG G       P L++  +L++  VK I CG   TA I
Sbjct: 374 GDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGARHTALI 424


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 167/377 (44%), Gaps = 39/377 (10%)

Query: 200 GDGILGGGIHRSGSYAG-VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 258
           GDG LG     +G     VK    V  A  S   + V+ IA G RH   +   G+V+S G
Sbjct: 34  GDGQLGNRGFLNGDDGNIVKTPQVVVGAPTSHDGVSVRAIATGERHTLFLADDGKVWSCG 93

Query: 259 EELGGRLGHG---VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 315
               G LG G     S   +P L+     +N+  +A G  H  AV   G ++ WG SN +
Sbjct: 94  SNENGELGRGGCQEGSFTIYPVLLSG--GVNIVQIAAGRAHNMAVADDGRLFAWG-SNSH 150

Query: 316 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 375
             L    N  S  +PK++    E + V+   CG  HT  +  +G++F +G      L   
Sbjct: 151 GQLALPSNITSTDIPKRVVSLTETVQVA---CGTDHTIAIVESGRIFVWG------LQPD 201

Query: 376 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGR 435
            R+ +  P+E++    L  V+   G  +  A+              SG +F WG  + G+
Sbjct: 202 GRV-LYAPKEIEFFMALPVVQVNAGSDYYVALT------------VSGAMFVWGSNEYGQ 248

Query: 436 LGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD----P 491
           LG  D + R  P  V  L   N   V+CGHS TVALT  G ++  GS   GQLG     P
Sbjct: 249 LGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDSCGQLGSGRKVP 308

Query: 492 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
             N  L      ++    V  +ACG  H   L    ++Y +G  ++G+LG G+   +  P
Sbjct: 309 SQNTMLAVT---EMLGTHVTRVACGRCHTLALAG-GKMYAFGLNSSGQLGSGNVRSQVTP 364

Query: 552 SLVEALKDKQVKSIVCG 568
             ++AL D  V S+  G
Sbjct: 365 RPIDALTD--VVSVFAG 379



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 35/268 (13%)

Query: 338 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVR 396
           +G+ V +++ G  HT  +   G++++ G    G LG G  +    T   V    G+  V+
Sbjct: 66  DGVSVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVNIVQ 125

Query: 397 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH-GDKEARLVPTCVAALVE 455
            A G  H  AV +             G+LF WG    G+L    +  +  +P  V +L E
Sbjct: 126 IAAGRAHNMAVAD------------DGRLFAWGSNSHGQLALPSNITSTDIPKRVVSLTE 173

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL---PTRVEGKLTKNFVEE 512
               QV+CG   T+A+  +G ++  G          + +G++   P  +E  +    V+ 
Sbjct: 174 T--VQVACGTDHTIAIVESGRIFVWGL---------QPDGRVLYAPKEIEFFMALPVVQV 222

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 572
            A  DY+VA LT    ++ WG    G+LG  D  +R  P+ V  L    V  + CG S T
Sbjct: 223 NAGSDYYVA-LTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHT 281

Query: 573 AAICLHK---WVSGVDQ--SMCSGCRIP 595
            A+  H+   +V G D    + SG ++P
Sbjct: 282 VALT-HEGRLFVCGSDSCGQLGSGRKVP 308


>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
          Length = 286

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 114/239 (47%), Gaps = 13/239 (5%)

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
           +S G  HT  + +   + ++G G  G LGHGD      P  V +L G       CG  HT
Sbjct: 19  ISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICGADHT 78

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
            A  +           S   +++WG GD GRLGHG+     +P  +  L      Q++CG
Sbjct: 79  TAYSD-----------SRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQIACG 127

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
            S  +A+T  G V + G    GQLG     +   P RV+    +  V+ ++CG  H   +
Sbjct: 128 DSHCLAVTINGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQ-VSCGWRHTVAI 186

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVS 582
           T ++ V++WG+G +G+LGHGD  DRN P L+EAL           TS T  +    W+S
Sbjct: 187 TGKSNVFSWGRGTSGQLGHGDILDRNMPVLIEALSVDGSACEQIQTSKTTVLSGSSWIS 245



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 111/225 (49%), Gaps = 17/225 (7%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           I+ G  H   +     V SWG    G+LGHG   D   P  + AL    +  V CG  HT
Sbjct: 19  ISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICGADHT 78

Query: 298 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 356
            A + S   +Y+WG  +  FG LGHGN   L++P  +   L+G+ +  ++CG  H   VT
Sbjct: 79  TAYSDSRLVVYSWGWGD--FGRLGHGNSSDLFIPHAIK-TLQGLQIKQIACGDSHCLAVT 135

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G++ ++G    G LG GD I  S P+ V        V+ +CG  HT A+       + 
Sbjct: 136 INGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAI-------TG 188

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL-VEPNFCQ 460
            SN     +F+WG G  G+LGHGD   R +P  + AL V+ + C+
Sbjct: 189 KSN-----VFSWGRGTSGQLGHGDILDRNMPVLIEALSVDGSACE 228



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 90/171 (52%), Gaps = 2/171 (1%)

Query: 407 VVEVMVGSSSSSNCSSGKLF-TWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
           V+ +  G+S +    +G L  +WG G+ G+LGHGD E R +PT V+AL       V CG 
Sbjct: 16  VLLISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICGA 75

Query: 466 SLTVALTTTGHV-YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
             T A + +  V Y+ G   +G+LG   ++          L    +++IACGD H   +T
Sbjct: 76  DHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQIACGDSHCLAVT 135

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              EV +WG+  NG+LG GD  D +FP  V+   +++V  + CG   T AI
Sbjct: 136 INGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAI 186



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D F+P A+++   L ++ IACG  H   VT  GEV SWG    G+LG G + D S P+ +
Sbjct: 106 DLFIPHAIKTLQGLQIKQIACGDSHCLAVTINGEVQSWGRNQNGQLGVGDNIDHSFPQRV 165

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP 330
                  V  V+CG  HT A+T   ++++WG      G LGHG+ +   +P
Sbjct: 166 KLPAEEEVVQVSCGWRHTVAITGKSNVFSWGRGTS--GQLGHGDILDRNMP 214


>gi|358419997|ref|XP_003584389.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Bos
           taurus]
          Length = 538

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 147/300 (49%), Gaps = 23/300 (7%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           ++CG+ HT   T +  ++ +G +N  +G LG G++ ++  P  +   L+   V  V+CG 
Sbjct: 85  LSCGDEHTAITTGNNKLFMFGSNN--WGQLGLGSKATVNKPTCIKA-LKPEKVKFVACGR 141

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
            HT ++T  GQ++  G    G LG GD    S    +        ++      +T+A + 
Sbjct: 142 NHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAAL- 200

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
                        G+LF WGD   G++G  +     VP  V   +      +SCG+  + 
Sbjct: 201 ----------TEDGELFMWGDNSEGQIGLQNITNICVPHQVT--IGKPISWISCGYYHSA 248

Query: 470 ALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
            +TT G +YT G P  G+LG P     N K+P  V G   K  V ++ACG  H  VLT +
Sbjct: 249 FVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEK--VIQVACGGGHTVVLTEK 306

Query: 527 TEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVD 585
             VYT+G G  G+LG G  T + + P ++E++KDK++  + CG + TA I +   +S  D
Sbjct: 307 A-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITVQFNISVND 365



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 25/297 (8%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+ T   ++F +G    G+LG G  + V+ P  I ALK   V+ VACG +HT
Sbjct: 85  LSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHT 144

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVVT 356
             +T  G +Y  GG+N     LG  +E S +    L       H +  +S G   +A +T
Sbjct: 145 LILTGGGQVYATGGNNEGQLGLGDTDERSAF---HLISFFTSQHKIKQLSAGSNTSAALT 201

Query: 357 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 416
             G+LF +GD + G +G  +  ++  P +V   K +  +  +CG +H+A V         
Sbjct: 202 EDGELFMWGDNSEGQIGLQNITNICVPHQVTIGKPISWI--SCGYYHSAFVT-------- 251

Query: 417 SSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
               + G+L+T+G+ + G+LG   K      VP  V  + E    QV+CG   TV LT  
Sbjct: 252 ----TEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISE-KVIQVACGGGHTVVLTEK 306

Query: 475 GHVYTMGSPVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
             VYT G   +GQLG      +   P  +E    K  +  + CG+ H A++T +  +
Sbjct: 307 A-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKK-ISHVCCGENHTALITVQFNI 361



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 116/237 (48%), Gaps = 22/237 (9%)

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
           S+SCG  HTA+ T   +LF FG   +G LG G + +V+ P  + +LK  +    ACG  H
Sbjct: 84  SLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNH 143

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV-EPNFCQVS 462
           T     ++ G         G+++  G  + G+LG GD + R     ++    +    Q+S
Sbjct: 144 TL----ILTGG--------GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLS 191

Query: 463 CGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVE-GKLTKNFVEEIACGDYHV 520
            G + + ALT  G ++  G    GQ+G     N  +P +V  GK     +  I+CG YH 
Sbjct: 192 AGSNTSAALTEDGELFMWGDNSEGQIGLQNITNICVPHQVTIGKP----ISWISCGYYHS 247

Query: 521 AVLTSRTEVYTWGKGANGRLGHGDT--DDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           A +T+  E+YT+G+  +G+LG       +   P LV  + +K ++ + CG   T  +
Sbjct: 248 AFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQ-VACGGGHTVVL 303



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 23/258 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  +++     V+ +ACG  H  ++T  G+V++ G    G+LG G   + S   LI    
Sbjct: 123 PTCIKALKPEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFT 182

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + + ++ ++ G + + A+T  G+++ WG ++   G +G  N  ++ +P ++     G  +
Sbjct: 183 SQHKIKQLSAGSNTSAALTEDGELFMWGDNSE--GQIGLQNITNICVPHQVT---IGKPI 237

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ G+L+TFG+   G LG   ++ V+   P+ V  +   + ++ ACG
Sbjct: 238 SWISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISE-KVIQVACG 296

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G        P  + ++ +    
Sbjct: 297 GGHTVVLTEKAV-------------YTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKIS 343

Query: 460 QVSCGHSLTVALTTTGHV 477
            V CG + T  +T   ++
Sbjct: 344 HVCCGENHTALITVQFNI 361



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 7/109 (6%)

Query: 218 KMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHP 276
           K+   VP   E  +      +ACGG H  ++T++  V+++G    G+LG G  + + S P
Sbjct: 278 KVPQLVPGISEKVI-----QVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEP 331

Query: 277 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 325
           K+I+++K+  +  V CGE+HT  +T+  ++        N  +L   +E+
Sbjct: 332 KVIESVKDKKISHVCCGENHTALITVQFNISVNDLEPQNMSVLSEDHEL 380



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 10/102 (9%)

Query: 474 TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           +G V+T G   + +         +P++   K  ++    ++CGD H A+ T   +++ +G
Sbjct: 56  SGAVFTFGKTKFAE--------NMPSKFWFK--RDIPISLSCGDEHTAITTGNNKLFMFG 105

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
               G+LG G     N P+ ++ALK ++VK + CG + T  +
Sbjct: 106 SNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHTLIL 147


>gi|71027837|ref|XP_763562.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350515|gb|EAN31279.1| hypothetical protein TP03_0534 [Theileria parva]
          Length = 1060

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 181/439 (41%), Gaps = 86/439 (19%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKM----DSFVPKAVESAVVLDVQNIACGGRHA 245
           G ++ WG     G+LG G   +  Y  VK+    D+F+ K             A G RH+
Sbjct: 189 GYLYAWG-VGAHGVLGNG-SVANRYIPVKVIFPQDTFISKC------------AAGARHS 234

Query: 246 ALVTKQGEVFSWGE-----------ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
             +  +G ++SWG               GRLG G       P LI+      V  ++CG+
Sbjct: 235 MALDIKGNIWSWGYGGIVHSIFHIIHRNGRLGLGSTRSCFTPNLIEIFDTYEVFQISCGD 294

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
            H+  +   G +YTWG  +C  G LG GN +S  L   +   L+GIH+  VSCG  +T  
Sbjct: 295 SHSACLDRFGTVYTWG--SCRGGKLGLGNILSDVLEPTIVQSLKGIHIIQVSCGSGNTLA 352

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRI---SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           ++S+G+++ +G  T G     D +   +V +P  V    G + +    G +  AA+    
Sbjct: 353 LSSSGKIYQWGS-TLGFNKQTDGLISHTVYSPEPVAE-TGFKNIFVTSGPYSFAAINIF- 409

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL------------------ 453
                      G L TWG G   RLGHGD +  ++P  V+ L                  
Sbjct: 410 -----------GDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRVYIDNLLKTYDEAAF 458

Query: 454 ---------VEP----NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTR 500
                    V P       Q++ G +    LT  G VYT G+      G       L   
Sbjct: 459 KVEDTVEKTVNPYDERRIQQIAVGDAHGALLTCNGTVYTWGAN--NGTGCNSTTEPLENY 516

Query: 501 VEGKLTKNF---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 557
            E  L  +F   + +IACG  H   +T    +++WG   +G+LGHGD   R  P  V  +
Sbjct: 517 CEPILFNHFSSKITKIACGSSHTLAVTINGLLFSWGSNESGQLGHGDLRSRVVPDSVSNI 576

Query: 558 KDKQVKSIVCGTSFTAAIC 576
           ++    ++  G   +  IC
Sbjct: 577 EN--CINVFAGIDNSGCIC 593



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 165/375 (44%), Gaps = 72/375 (19%)

Query: 235 VQNIACGGRHAALVT-------KQGEVFSWGEELGGRLGHGVDSD--------------- 272
           V  ++CG  H+A++          G VF++G    GRLG+ +D++               
Sbjct: 92  VTQVSCGDYHSAVLVCSSRENINAGTVFTFGLGNSGRLGYHIDTNSEIISQQIGTDDKDE 151

Query: 273 ------VSHPK-LIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNE 324
                 V  P  +   L+N NV  ++CG +HT   T  G +Y WG G++   G+LG+G+ 
Sbjct: 152 PSWCTPVPQPVGMSIGLRN-NVVTISCGANHTLVTTADGYLYAWGVGAH---GVLGNGSV 207

Query: 325 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF-----------GVLG 373
            + ++P K+  P +   +S  + G  H+  +   G ++++G G             G LG
Sbjct: 208 ANRYIPVKVIFP-QDTFISKCAAGARHSMALDIKGNIWSWGYGGIVHSIFHIIHRNGRLG 266

Query: 374 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
            G   S  TP  ++        + +CG  H+A +               G ++TWG    
Sbjct: 267 LGSTRSCFTPNLIEIFDTYEVFQISCGDSHSACLDRF------------GTVYTWGSCRG 314

Query: 434 GRLGHGDKEARLV-PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 492
           G+LG G+  + ++ PT V +L   +  QVSCG   T+AL+++G +Y  GS     LG  K
Sbjct: 315 GKLGLGNILSDVLEPTIVQSLKGIHIIQVSCGSGNTLALSSSGKIYQWGS----TLGFNK 370

Query: 493 ANGKL-------PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
               L       P  V     KN    +  G Y  A +    ++ TWG G   RLGHGD+
Sbjct: 371 QTDGLISHTVYSPEPVAETGFKNIF--VTSGPYSFAAINIFGDLLTWGLGTGYRLGHGDS 428

Query: 546 DDRNFPSLVEALKDK 560
            D   P  V  L+ +
Sbjct: 429 KDHVIPKFVSYLRTR 443



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 178/444 (40%), Gaps = 92/444 (20%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           D  G V+ WG C G G LG G         +  D   P  V+S   + +  ++CG  +  
Sbjct: 301 DRFGTVYTWGSCRG-GKLGLG--------NILSDVLEPTIVQSLKGIHIIQVSCGSGNTL 351

Query: 247 LVTKQGEVFSWGEELG------GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 300
            ++  G+++ WG  LG      G + H V S    P      KNI    V  G +   A+
Sbjct: 352 ALSSSGKIYQWGSTLGFNKQTDGLISHTVYS--PEPVAETGFKNI---FVTSGPYSFAAI 406

Query: 301 TLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPK---------------------------- 331
            + GD+ TWG G+      LGHG+     +PK                            
Sbjct: 407 NIFGDLLTWGLGTGYR---LGHGDSKDHVIPKFVSYLRTRVYIDNLLKTYDEAAFKVEDT 463

Query: 332 --KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 389
             K   P +   +  ++ G  H A++T  G ++T+G       G G   S + P E    
Sbjct: 464 VEKTVNPYDERRIQQIAVGDAHGALLTCNGTVYTWGANN----GTGCN-STTEPLENYCE 518

Query: 390 KGL------RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA 443
             L      +  + ACG  HT AV              +G LF+WG  + G+LGHGD  +
Sbjct: 519 PILFNHFSSKITKIACGSSHTLAVT------------INGLLFSWGSNESGQLGHGDLRS 566

Query: 444 RLVPTCVAAL---------VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKA 493
           R+VP  V+ +         ++ + C  S  H   +     G ++  GS   G+LG     
Sbjct: 567 RVVPDSVSNIENCINVFAGIDNSGCICSVSHE-NMMKDEYGTLWVFGSSTCGKLGLGENM 625

Query: 494 NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL 553
              + T  E  +T   V  +A G  H   LTS   +Y  G G+ GRLG G+T   N  + 
Sbjct: 626 TSAVMTPREVNITG--VHSVALGPMHSLALTSDGTLYAAGAGSGGRLGTGNT--TNSFTF 681

Query: 554 VEALKDKQVKSIVCGTSFTAAICL 577
           V+   D +  ++  G S + AI +
Sbjct: 682 VQVKTDHKFVAVGAGASHSLAISM 705



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 42/269 (15%)

Query: 360 QLFTFGDGTFGVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            + ++G   F  LG G  ++ S  PR +    G R  + +CG +H+A +V      SS  
Sbjct: 57  NVLSWGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLV-----CSSRE 111

Query: 419 NCSSGKLFTWGDGDRGRLG-HGDKEARLV--------------------PTCVAALVEPN 457
           N ++G +FT+G G+ GRLG H D  + ++                    P  ++  +  N
Sbjct: 112 NINAGTVFTFGLGNSGRLGYHIDTNSEIISQQIGTDDKDEPSWCTPVPQPVGMSIGLRNN 171

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACG 516
              +SCG + T+  T  G++Y  G   +G LG+   AN  +P +V       F+ + A G
Sbjct: 172 VVTISCGANHTLVTTADGYLYAWGVGAHGVLGNGSVANRYIPVKVIFP-QDTFISKCAAG 230

Query: 517 DYHVAVLTSRTEVYTWGKGA-----------NGRLGHGDTDDRNFPSLVEALKDKQVKSI 565
             H   L  +  +++WG G            NGRLG G T     P+L+E     +V  I
Sbjct: 231 ARHSMALDIKGNIWSWGYGGIVHSIFHIIHRNGRLGLGSTRSCFTPNLIEIFDTYEVFQI 290

Query: 566 VCGTSFTAAICLHKWVSGVDQSMCSGCRI 594
            CG S +A  CL ++ +      C G ++
Sbjct: 291 SCGDSHSA--CLDRFGTVYTWGSCRGGKL 317



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 149/336 (44%), Gaps = 50/336 (14%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN--VELVAC 292
           +  IACG  H   VT  G +FSWG    G+LGHG   D+    + D++ NI   + + A 
Sbjct: 529 ITKIACGSSHTLAVTINGLLFSWGSNESGQLGHG---DLRSRVVPDSVSNIENCINVFAG 585

Query: 293 GEHHTCAVTLS---------GDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIH 341
            ++  C  ++S         G ++ +G S C  G LG G  M+  +  P+++N  + G+H
Sbjct: 586 IDNSGCICSVSHENMMKDEYGTLWVFGSSTC--GKLGLGENMTSAVMTPREVN--ITGVH 641

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
             SV+ GP H+  +TS G L+  G G+ G LG G+  +  T  +V +    + V    G 
Sbjct: 642 --SVALGPMHSLALTSDGTLYAAGAGSGGRLGTGNTTNSFTFVQVKTDH--KFVAVGAGA 697

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            H+ A+        S  N     L+ WG+G          E  ++ T  +   +     +
Sbjct: 698 SHSLAI--------SMEN----DLYGWGEGKYLTFDEDVLEPTIINTIPSTTGQAKVVAL 745

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLG-----DPKANG----KLPTRVEGKLTKNFVEE 512
           +   + ++ L+ +G++   G   YGQLG        AN      LP  V+G +       
Sbjct: 746 AVAANHSLVLSQSGNLSGFGDNSYGQLGVFLSMKSSANNFIKMPLPVNVQGNIVC----- 800

Query: 513 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
           +A   Y  +      + ++WG   + RLG G+T  +
Sbjct: 801 VATSRYFSSCSNLGGDAFSWGLAKDHRLGIGETKSK 836



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 27/228 (11%)

Query: 232 VLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA 291
           +  V ++A G  H+  +T  G +++ G   GGRLG G  +  +    +    +     V 
Sbjct: 637 ITGVHSVALGPMHSLALTSDGTLYAAGAGSGGRLGTG--NTTNSFTFVQVKTDHKFVAVG 694

Query: 292 CGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLN---GPLEGIHVSSVSC 347
            G  H+ A+++  D+Y WG G    F       +  +  P  +N          V +++ 
Sbjct: 695 AGASHSLAISMENDLYGWGEGKYLTF-------DEDVLEPTIINTIPSTTGQAKVVALAV 747

Query: 348 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 407
              H+ V++ +G L  FGD ++G LG    + +S     ++      ++    V     +
Sbjct: 748 AANHSLVLSQSGNLSGFGDNSYGQLG----VFLSMKSSANNF-----IKMPLPVNVQGNI 798

Query: 408 VEVMVGSSSSSNCSS--GKLFTWGDGDRGRLGHGDKEARLV--PTCVA 451
           V V   S   S+CS+  G  F+WG     RLG G+ +++++  PT +A
Sbjct: 799 VCVAT-SRYFSSCSNLGGDAFSWGLAKDHRLGIGETKSKIIYKPTPIA 845


>gi|296086178|emb|CBI31619.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 102/176 (57%), Gaps = 4/176 (2%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ IACGGRH+A++T  G +  +G  L G+ G G   D   P  + +L  I +E VA G 
Sbjct: 286 VKWIACGGRHSAVITDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGL 345

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTA 353
            HT  ++  GD+YT+GG+   FG LG G +    LP+ L+ P LE  H   VSCG  H+A
Sbjct: 346 WHTVCISADGDVYTFGGN--QFGQLGTGVDQPETLPRLLDAPSLENAHAKIVSCGARHSA 403

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           ++T+ G++F++G   +G LG GD +  + P +V +L G      ACG WHT  + E
Sbjct: 404 IITADGKMFSWGWNKYGQLGLGDVVDRNIPSQV-TLDGCTPKNVACGWWHTLLLAE 458



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 49/263 (18%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLK------- 390
           G+ +++V+ G  HT  ++  GQ++ +G G  G LG G RI  VS+P  V  ++       
Sbjct: 203 GVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVESSSYGKE 262

Query: 391 --------------------GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
                               G      ACG  H+A + +            +G L  +G 
Sbjct: 263 RSSALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITD------------AGALLMFGW 310

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG- 489
           G  G+ G G  +  L PTCV++L+     +V+ G   TV ++  G VYT G   +GQLG 
Sbjct: 311 GLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCISADGDVYTFGGNQFGQLGT 370

Query: 490 ---DPKANGKLPTRVEGKLTKN-FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
               P+    LP  ++    +N   + ++CG  H A++T+  ++++WG    G+LG GD 
Sbjct: 371 GVDQPET---LPRLLDAPSLENAHAKIVSCGARHSAIITADGKMFSWGWNKYGQLGLGDV 427

Query: 546 DDRNFPSLVEALKDKQVKSIVCG 568
            DRN PS V  L     K++ CG
Sbjct: 428 VDRNIPSQV-TLDGCTPKNVACG 449



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 146/317 (46%), Gaps = 50/317 (15%)

Query: 213 SYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
           S +G +  S +P  V     + + N+A GGRH   ++  G+V+ WG    G+LG G    
Sbjct: 184 SSSGDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLG---- 239

Query: 273 VSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK 331
            S  +++ +   +  VE  + G+  + A+   G++ T G               SL +P 
Sbjct: 240 -SRIRMVSSPHPVPCVESSSYGKERSSALA-RGNVSTEG--------------QSLRVP- 282

Query: 332 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
                  G +V  ++CG  H+AV+T AG L  FG G +G  G G      +P  V SL G
Sbjct: 283 -------GSYVKWIACGGRHSAVITDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLG 335

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
           ++  R A G+WHT  +             + G ++T+G    G+LG G  +   +P  + 
Sbjct: 336 IQIERVAAGLWHTVCI------------SADGDVYTFGGNQFGQLGTGVDQPETLPRLLD 383

Query: 452 A--LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRV--EGKLT 506
           A  L   +   VSCG   +  +T  G +++ G   YGQLG     +  +P++V  +G   
Sbjct: 384 APSLENAHAKIVSCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQVTLDGCTP 443

Query: 507 KNFVEEIACGDYHVAVL 523
           KN    +ACG +H  +L
Sbjct: 444 KN----VACGWWHTLLL 456



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 44/232 (18%)

Query: 375 GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRG 434
           GD    + P  V    G+R    A G  HT A+ +V            G+++ WG G  G
Sbjct: 187 GDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDV------------GQVWGWGYGGEG 234

Query: 435 RLGHGDKEARLVPT-----CV----------AALVEPNFCQ--------------VSCGH 465
           +LG G +  R+V +     CV          +AL   N                 ++CG 
Sbjct: 235 QLGLGSR-IRMVSSPHPVPCVESSSYGKERSSALARGNVSTEGQSLRVPGSYVKWIACGG 293

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             +  +T  G +   G  +YGQ G    + +L       L    +E +A G +H   +++
Sbjct: 294 RHSAVITDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCISA 353

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFTAAI 575
             +VYT+G    G+LG G       P L++A  L++   K + CG   +A I
Sbjct: 354 DGDVYTFGGNQFGQLGTGVDQPETLPRLLDAPSLENAHAKIVSCGARHSAII 405


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 132/276 (47%), Gaps = 18/276 (6%)

Query: 240 CGGRHAALVTKQGEVF-SWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 298
           C   +A+ V   G V  SWG    G+LGHG   D   P  + A    ++  V CG  +T 
Sbjct: 55  CSKVNASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTV 114

Query: 299 AVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
           A + SG D+Y+WG  +  FG LGHG+   L++P  +   L+G+ +  +SCG  H   VT 
Sbjct: 115 ARSKSGKDVYSWGWGD--FGRLGHGDPSDLFIPHPIRA-LQGLRIKQISCGDCHCLAVTM 171

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
             ++ ++G    G LG G       P+++ + +G+R    A G  H+ A+ E        
Sbjct: 172 ENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE-------- 223

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 477
                G L+ WG G  G LG GD   RL+P  V  +       VSCG   T++++++G +
Sbjct: 224 ----DGDLYGWGWGRYGNLGLGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGL 278

Query: 478 YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 513
           YT G   YGQLG       L  R    L+   + ++
Sbjct: 279 YTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 314



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 137/279 (49%), Gaps = 22/279 (7%)

Query: 292 CGEHHTCAVTLSGDMY-TWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           C + +  AV   G++  +WG G +   G LGHG+     LP KL+   +G  + SV+CG 
Sbjct: 55  CSKVNASAVNFPGNVVCSWGRGED---GQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGA 110

Query: 350 WHTAVVTSAGQ-LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
            +T   + +G+ ++++G G FG LGHGD   +  P  + +L+GLR  + +CG  H  AV 
Sbjct: 111 DYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVT 170

Query: 409 EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT 468
                          K+ +WG    G LG G  +   VP  + A        V+ G   +
Sbjct: 171 ------------MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHS 218

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRT 527
           VA+T  G +Y  G   YG LG    N +L P +V   +  + +  ++CG  H   ++S  
Sbjct: 219 VAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSG 276

Query: 528 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
            +YT G    G+LGHGD +D   P  V+AL DK +  ++
Sbjct: 277 GLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQVI 315



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 103/199 (51%), Gaps = 14/199 (7%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           DV+ WG         G   R G   G   D F+P  + +   L ++ I+CG  H   VT 
Sbjct: 122 DVYSWGW--------GDFGRLGH--GDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 171

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           + +V SWG    G LG G   D   P+ I A + I +++VA G  H+ A+T  GD+Y WG
Sbjct: 172 ENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWG 231

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                +G LG G+     +P+K+N  ++G  +  VSCG  HT  ++S+G L+T G   +G
Sbjct: 232 WG--RYGNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYG 287

Query: 371 VLGHGDRISVSTPREVDSL 389
            LGHGD      PR+V +L
Sbjct: 288 QLGHGDFEDCLVPRKVQAL 306



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 5/165 (3%)

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
           ++S+ N     + +WG G+ G+LGHGD + RL+PT ++A    +   V+CG   TVA + 
Sbjct: 59  NASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSK 118

Query: 474 TGH-VYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 530
           +G  VY+ G   +G+LG  DP ++  +P  +   L    +++I+CGD H   +T   +V 
Sbjct: 119 SGKDVYSWGWGDFGRLGHGDP-SDLFIPHPIRA-LQGLRIKQISCGDCHCLAVTMENKVL 176

Query: 531 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +WG+  NG LG G T D + P  + A +  ++K +  G   + AI
Sbjct: 177 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 221



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 486 GQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
           GQLG    + +L PT++     ++ V      DY VA   S  +VY+WG G  GRLGHGD
Sbjct: 79  GQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGD 138

Query: 545 TDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
             D   P  + AL+  ++K I CG     A+ +
Sbjct: 139 PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 171


>gi|225449388|ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
           vinifera]
          Length = 484

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 102/176 (57%), Gaps = 4/176 (2%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V+ IACGGRH+A++T  G +  +G  L G+ G G   D   P  + +L  I +E VA G 
Sbjct: 309 VKWIACGGRHSAVITDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGL 368

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTA 353
            HT  ++  GD+YT+GG+   FG LG G +    LP+ L+ P LE  H   VSCG  H+A
Sbjct: 369 WHTVCISADGDVYTFGGN--QFGQLGTGVDQPETLPRLLDAPSLENAHAKIVSCGARHSA 426

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           ++T+ G++F++G   +G LG GD +  + P +V +L G      ACG WHT  + E
Sbjct: 427 IITADGKMFSWGWNKYGQLGLGDVVDRNIPSQV-TLDGCTPKNVACGWWHTLLLAE 481



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 49/263 (18%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLK------- 390
           G+ +++V+ G  HT  ++  GQ++ +G G  G LG G RI  VS+P  V  ++       
Sbjct: 226 GVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVESSSYGKE 285

Query: 391 --------------------GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
                               G      ACG  H+A + +            +G L  +G 
Sbjct: 286 RSSALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITD------------AGALLMFGW 333

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG- 489
           G  G+ G G  +  L PTCV++L+     +V+ G   TV ++  G VYT G   +GQLG 
Sbjct: 334 GLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCISADGDVYTFGGNQFGQLGT 393

Query: 490 ---DPKANGKLPTRVEGKLTKN-FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 545
               P+    LP  ++    +N   + ++CG  H A++T+  ++++WG    G+LG GD 
Sbjct: 394 GVDQPET---LPRLLDAPSLENAHAKIVSCGARHSAIITADGKMFSWGWNKYGQLGLGDV 450

Query: 546 DDRNFPSLVEALKDKQVKSIVCG 568
            DRN PS V  L     K++ CG
Sbjct: 451 VDRNIPSQV-TLDGCTPKNVACG 472



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 50/295 (16%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACG 293
           + N+A GGRH   ++  G+V+ WG    G+LG G     S  +++ +   +  VE  + G
Sbjct: 229 IANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLG-----SRIRMVSSPHPVPCVESSSYG 283

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
           +  + A+   G++ T G               SL +P        G +V  ++CG  H+A
Sbjct: 284 KERSSALA-RGNVSTEG--------------QSLRVP--------GSYVKWIACGGRHSA 320

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           V+T AG L  FG G +G  G G      +P  V SL G++  R A G+WHT  +      
Sbjct: 321 VITDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCI------ 374

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA--LVEPNFCQVSCGHSLTVAL 471
                  + G ++T+G    G+LG G  +   +P  + A  L   +   VSCG   +  +
Sbjct: 375 ------SADGDVYTFGGNQFGQLGTGVDQPETLPRLLDAPSLENAHAKIVSCGARHSAII 428

Query: 472 TTTGHVYTMGSPVYGQLG-DPKANGKLPTRV--EGKLTKNFVEEIACGDYHVAVL 523
           T  G +++ G   YGQLG     +  +P++V  +G   KN    +ACG +H  +L
Sbjct: 429 TADGKMFSWGWNKYGQLGLGDVVDRNIPSQVTLDGCTPKN----VACGWWHTLLL 479



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 80/138 (57%), Gaps = 6/138 (4%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D   P  V S + + ++ +A G  H   ++  G+V+++G    G+LG GVD   + P+L+
Sbjct: 346 DELSPTCVSSLLGIQIERVAAGLWHTVCISADGDVYTFGGNQFGQLGTGVDQPETLPRLL 405

Query: 280 DA--LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL 337
           DA  L+N + ++V+CG  H+  +T  G M++WG +   +G LG G+ +   +P ++   L
Sbjct: 406 DAPSLENAHAKIVSCGARHSAIITADGKMFSWGWNK--YGQLGLGDVVDRNIPSQVT--L 461

Query: 338 EGIHVSSVSCGPWHTAVV 355
           +G    +V+CG WHT ++
Sbjct: 462 DGCTPKNVACGWWHTLLL 479



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 44/232 (18%)

Query: 375 GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRG 434
           GD    + P  V    G+R    A G  HT A+ +V            G+++ WG G  G
Sbjct: 210 GDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDV------------GQVWGWGYGGEG 257

Query: 435 RLGHGDKEARLVPT-----CV----------AALVEPNFCQ--------------VSCGH 465
           +LG G +  R+V +     CV          +AL   N                 ++CG 
Sbjct: 258 QLGLGSR-IRMVSSPHPVPCVESSSYGKERSSALARGNVSTEGQSLRVPGSYVKWIACGG 316

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
             +  +T  G +   G  +YGQ G    + +L       L    +E +A G +H   +++
Sbjct: 317 RHSAVITDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCISA 376

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFTAAI 575
             +VYT+G    G+LG G       P L++A  L++   K + CG   +A I
Sbjct: 377 DGDVYTFGGNQFGQLGTGVDQPETLPRLLDAPSLENAHAKIVSCGARHSAII 428


>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
            [Oxytricha trifallax]
          Length = 2049

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 167/406 (41%), Gaps = 88/406 (21%)

Query: 222  FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
              P+ + S     ++ + CG  H  ++   G+VF WG    G+LG G +S    P+++ A
Sbjct: 1622 LYPRMIISLKDEVIREVCCGNSHTMVINMSGQVFVWGANQTGQLGLGDNS----PQILSA 1677

Query: 282  LKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
                       G  H+ A+T S ++Y WG G  C  G L   N      P K++      
Sbjct: 1678 -----------GYEHSIAITKSNELYIWGSGGLCGIGTLKQQNA-----PVKIDF-FNKS 1720

Query: 341  HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL------------GHGDRISVSTPREVDS 388
             + +  CG  HT  VT   + +++G    G L            G GD   V TP+ +  
Sbjct: 1721 KILTAVCGGLHTVAVTKDWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPK 1780

Query: 389  LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG--------- 439
            L+GL+  + ACG  H+ A+ +             G ++ WG  + G+LG G         
Sbjct: 1781 LEGLQIAQVACGEAHSIAMTK------------DGTIYGWGQSNYGQLGLGFSGDSFEPG 1828

Query: 440  ---DKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG------- 489
               +K     P  +  L      ++ CG + T+  T  G +Y  G    GQLG       
Sbjct: 1829 LGMEKSKVYEPQEINGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEE 1888

Query: 490  ------DPKANGK--------LPTRV---EGKLTKNFVEEIACGDYHVAVLT--SRTEVY 530
                  +    GK        LPTRV   +G      + +IACG+ H   ++      ++
Sbjct: 1889 MQIASLEKVKKGKHNQTSDVILPTRVICFQGIA----IHQIACGESHSLAVSGDGMNMLW 1944

Query: 531  TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
             WG   NG+LG G+   +  P  V++L   Q++ I CG+  + A+ 
Sbjct: 1945 AWGMFKNGQLGLGEVTMKLNPRPVQSLCSSQIQRIACGSMHSVALI 1990



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 137/326 (42%), Gaps = 69/326 (21%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
             +++IWG     G+ G G  +  + A VK+D F    + +AV        CGG H   VT
Sbjct: 1689 NELYIWG---SGGLCGIGTLKQQN-APVKIDFFNKSKILTAV--------CGGLHTVAVT 1736

Query: 250  KQGEVFSWGEELGGRLG------------HGVDSDVSHPKLIDALKNINVELVACGEHHT 297
            K  E +SWG   GG+LG             G +  V  P+ I  L+ + +  VACGE H+
Sbjct: 1737 KDWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHS 1796

Query: 298  CAVTLSGDMYTWGGSNCNFGLLGHG------------NEMSLWLPKKLNGPLEGIHVSSV 345
             A+T  G +Y WG S  N+G LG G             +  ++ P+++NG L+   +S +
Sbjct: 1797 IAMTKDGTIYGWGQS--NYGQLGLGFSGDSFEPGLGMEKSKVYEPQEING-LKHEKISKI 1853

Query: 346  SCGPWHTAVVTSAGQLFTFGDGTFGVLG--------------------HGDRISVSTPRE 385
             CG   T   T  G L+  G    G LG                    H     V  P  
Sbjct: 1854 ICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVILPTR 1913

Query: 386  VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL 445
            V   +G+   + ACG  H+ AV          S      L+ WG    G+LG G+   +L
Sbjct: 1914 VICFQGIAIHQIACGESHSLAV----------SGDGMNMLWAWGMFKNGQLGLGEVTMKL 1963

Query: 446  VPTCVAALVEPNFCQVSCGHSLTVAL 471
             P  V +L      +++CG   +VAL
Sbjct: 1964 NPRPVQSLCSSQIQRIACGSMHSVAL 1989



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 157/394 (39%), Gaps = 93/394 (23%)

Query: 242  GRHAALVTKQ---GEVFSWGEELGGRLGHGVDSD------------VSHPKLIDALKNIN 286
            G+    + KQ   G +FS G +  G+LG  V S             V +P++I +LK+  
Sbjct: 1575 GKEVGGINKQEMCGILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLYPRMIISLKDEV 1634

Query: 287  VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
            +  V CG  HT  + +SG ++ WG +    G LG G+          N P        +S
Sbjct: 1635 IREVCCGNSHTMVINMSGQVFVWGANQT--GQLGLGD----------NSP------QILS 1676

Query: 347  CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
             G  H+  +T + +L+ +G G  G+ G G     + P ++D     + + A CG  HT A
Sbjct: 1677 AGYEHSIAITKSNELYIWGSG--GLCGIGTLKQQNAPVKIDFFNKSKILTAVCGGLHTVA 1734

Query: 407  VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG------------HGDKEARLVPTCVAALV 454
            V +              + ++WG  + G+LG             GD+   L P  +  L 
Sbjct: 1735 VTK------------DWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLE 1782

Query: 455  EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--------DP-----KANGKLPTRV 501
                 QV+CG + ++A+T  G +Y  G   YGQLG        +P     K+    P  +
Sbjct: 1783 GLQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEI 1842

Query: 502  EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG-------------------- 541
             G L    + +I CG       T + ++Y  G    G+LG                    
Sbjct: 1843 NG-LKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGK 1901

Query: 542  HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            H  T D   P+ V   +   +  I CG S + A+
Sbjct: 1902 HNQTSDVILPTRVICFQGIAIHQIACGESHSLAV 1935



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 138/343 (40%), Gaps = 62/343 (18%)

Query: 236  QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 295
            Q ++ G  H+  +TK  E++ WG   GG  G G     + P  ID      +    CG  
Sbjct: 1673 QILSAGYEHSIAITKSNELYIWGS--GGLCGIGTLKQQNAPVKIDFFNKSKILTAVCGGL 1730

Query: 296  HTCAVTLSGDMYTWGGSNC-NFGL---------LGHGNEMSLWLPKKLNGPLEGIHVSSV 345
            HT AVT   + Y+WG +     GL          G G+E  +  P+++   LEG+ ++ V
Sbjct: 1731 HTVAVTKDWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRI-PKLEGLQIAQV 1789

Query: 346  SCGPWHTAVVTSAGQLFTFGDGTFGVLGHG------------DRISVSTPREVDSLKGLR 393
            +CG  H+  +T  G ++ +G   +G LG G            ++  V  P+E++ LK  +
Sbjct: 1790 ACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEK 1849

Query: 394  TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG---------------- 437
              +  CG   T                  G L+  G  D G+LG                
Sbjct: 1850 ISKIICGATFTLF------------QTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKV 1897

Query: 438  ----HGDKEARLVPTCVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDP 491
                H      ++PT V         Q++CG  HSL V+      ++  G    GQLG  
Sbjct: 1898 KKGKHNQTSDVILPTRVICFQGIAIHQIACGESHSLAVSGDGMNMLWAWGMFKNGQLGLG 1957

Query: 492  KANGKLPTRVEGKLTKNFVEEIACGDYHVAVL---TSRTEVYT 531
            +   KL  R    L  + ++ IACG  H   L   T++  +Y+
Sbjct: 1958 EVTMKLNPRPVQSLCSSQIQRIACGSMHSVALIGDTNQISIYS 2000



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 94/253 (37%), Gaps = 53/253 (20%)

Query: 359  GQLFTFGDGTFGVLG------------HGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
            G LF+ G    G LG            H   I V  PR + SLK        CG  HT  
Sbjct: 1588 GILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLYPRMIISLKDEVIREVCCGNSHTMV 1647

Query: 407  VVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHS 466
            +              SG++F WG    G+LG GD   +++               S G+ 
Sbjct: 1648 I------------NMSGQVFVWGANQTGQLGLGDNSPQIL---------------SAGYE 1680

Query: 467  LTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 526
             ++A+T +  +Y  GS     +G  K     P +++    K+ +    CG  H   +T  
Sbjct: 1681 HSIAITKSNELYIWGSGGLCGIGTLKQQNA-PVKIDF-FNKSKILTAVCGGLHTVAVTKD 1738

Query: 527  TEVYTWGKGANGRLG------------HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
             E Y+WG    G+LG             GD      P  +  L+  Q+  + CG + + A
Sbjct: 1739 WEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIA 1798

Query: 575  ICLHKWVSGVDQS 587
            +     + G  QS
Sbjct: 1799 MTKDGTIYGWGQS 1811


>gi|356501083|ref|XP_003519358.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 477

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 105/176 (59%), Gaps = 4/176 (2%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ IACGGRH+A++T  G + ++G  L G+ G G+  D   P  + +L  I++E +A G 
Sbjct: 302 IKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGITDDELSPTCVSSLLGIHIEGIAAGL 361

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTA 353
            HT   +  GD+Y +GG+   FG LG G + +  LP+ ++ P L+ +H  ++SCG  HTA
Sbjct: 362 WHTVCTSADGDVYAFGGN--QFGQLGTGADQAETLPRLVDSPSLKNLHAKNISCGARHTA 419

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           +VT  G++F +G   +G LG GD I  + P EV +++G      ACG WHT  + E
Sbjct: 420 LVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEV-TIEGCVPKNVACGWWHTLLLAE 474



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 120/260 (46%), Gaps = 43/260 (16%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREV---DS------ 388
           GI ++SV+ G  HT  ++  G ++ +G G  G LG G RI  VSTP  V   DS      
Sbjct: 219 GIRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYVKD 278

Query: 389 ------------------LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
                             + G    R ACG  H+A + +            +G L T+G 
Sbjct: 279 RSATLARGNMGSEGQTFRIPGSYIKRIACGGRHSAVITD------------AGALLTFGW 326

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
           G  G+ G G  +  L PTCV++L+  +   ++ G   TV  +  G VY  G   +GQLG 
Sbjct: 327 GLYGQCGQGITDDELSPTCVSSLLGIHIEGIAAGLWHTVCTSADGDVYAFGGNQFGQLGT 386

Query: 491 PKANGK-LPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 548
                + LP  V+    KN   + I+CG  H A++T   +V+ WG    G+LG GD  DR
Sbjct: 387 GADQAETLPRLVDSPSLKNLHAKNISCGARHTALVTEGGKVFCWGWNKYGQLGLGDVIDR 446

Query: 549 NFPSLVEALKDKQVKSIVCG 568
           N PS V  ++    K++ CG
Sbjct: 447 NIPSEV-TIEGCVPKNVACG 465



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 130/299 (43%), Gaps = 54/299 (18%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVA 291
           + + ++A GGRH   ++  G V++WG    G+LG G     VS P L+  + +       
Sbjct: 220 IRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYV--- 276

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
                  A    G+M               G+E   +        + G ++  ++CG  H
Sbjct: 277 ---KDRSATLARGNM---------------GSEGQTFR-------IPGSYIKRIACGGRH 311

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +AV+T AG L TFG G +G  G G      +P  V SL G+     A G+WHT       
Sbjct: 312 SAVITDAGALLTFGWGLYGQCGQGITDDELSPTCVSSLLGIHIEGIAAGLWHTV------ 365

Query: 412 VGSSSSSNCSS--GKLFTWGDGDRGRLGHGDKEARLVPTCV--AALVEPNFCQVSCGHSL 467
                   C+S  G ++ +G    G+LG G  +A  +P  V   +L   +   +SCG   
Sbjct: 366 --------CTSADGDVYAFGGNQFGQLGTGADQAETLPRLVDSPSLKNLHAKNISCGARH 417

Query: 468 TVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRV--EGKLTKNFVEEIACGDYHVAVL 523
           T  +T  G V+  G   YGQLG     +  +P+ V  EG + KN    +ACG +H  +L
Sbjct: 418 TALVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVPKN----VACGWWHTLLL 472



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 6/142 (4%)

Query: 216 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 275
           G+  D   P  V S + + ++ IA G  H    +  G+V+++G    G+LG G D   + 
Sbjct: 335 GITDDELSPTCVSSLLGIHIEGIAAGLWHTVCTSADGDVYAFGGNQFGQLGTGADQAETL 394

Query: 276 PKLIDA--LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 333
           P+L+D+  LKN++ + ++CG  HT  VT  G ++ WG +   +G LG G+ +   +P ++
Sbjct: 395 PRLVDSPSLKNLHAKNISCGARHTALVTEGGKVFCWGWNK--YGQLGLGDVIDRNIPSEV 452

Query: 334 NGPLEGIHVSSVSCGPWHTAVV 355
              +EG    +V+CG WHT ++
Sbjct: 453 T--IEGCVPKNVACGWWHTLLL 472


>gi|323450026|gb|EGB05910.1| hypothetical protein AURANDRAFT_66097 [Aureococcus anophagefferens]
          Length = 1340

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 145/302 (48%), Gaps = 34/302 (11%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 349
           VA G  HT  V   G +   G      G LG G    +  P ++  P  G+   SV+   
Sbjct: 81  VAAGTSHTVVVAHDGTLRACGTDPTRRGFLGQGPVFRVHRPARV--PAGGLRFISVATHS 138

Query: 350 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           +HT  +T++G++++FG G  G LGHGD+ S +TPR VD+L G   V  +CG  H+ A+ +
Sbjct: 139 FHTLALTASGEVYSFGHGGCGQLGHGDQESSATPRRVDALAGAFVVAVSCGQQHSLALTD 198

Query: 410 VMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTV 469
                        G  + +G G  G+ G GD+ +R +P  VA + EP    ++ G   ++
Sbjct: 199 ------------RGAPYAFGSGFGGKTGLGDQRSRSLPRRVAGIPEP-VAVLTAGAHHSL 245

Query: 470 ALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
           A TT+G VY  GS V+ QLG P + +   P RV+       V +++ G++H   + +   
Sbjct: 246 AATTSGAVYAFGSNVHLQLGLPERGDAYAPRRVDA--LDGRVVQLSGGEHHSLAVDAAGA 303

Query: 529 VYTWGKG---------ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK 579
            Y+WG G           G LGH   DD   P  VE L    V+++ C     AA  LH 
Sbjct: 304 CYSWGAGEGRERTSVMVGGFLGHRSLDDAARPRRVEGLAG--VRAVDC-----AAGALHS 356

Query: 580 WV 581
            V
Sbjct: 357 LV 358



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 30/259 (11%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 292
           L   ++A    H   +T  GEV+S+G    G+LGHG     + P+ +DAL    V  V+C
Sbjct: 129 LRFISVATHSFHTLALTASGEVYSFGHGGCGQLGHGDQESSATPRRVDALAGAFVVAVSC 188

Query: 293 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
           G+ H+ A+T  G  Y +G      G  G G++ S  LP+++ G  E + V  ++ G  H+
Sbjct: 189 GQQHSLALTDRGAPYAFGSGFG--GKTGLGDQRSRSLPRRVAGIPEPVAV--LTAGAHHS 244

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
              T++G ++ FG      LG  +R     PR VD+L G R V+ + G  H+ AV     
Sbjct: 245 LAATTSGAVYAFGSNVHLQLGLPERGDAYAPRRVDALDG-RVVQLSGGEHHSLAVD---- 299

Query: 413 GSSSSSNCSSGKLFTWGDGD---------RGRLGHGDKEARLVPTCVAAL--VEPNFCQV 461
                   ++G  ++WG G+          G LGH   +    P  V  L  V    C  
Sbjct: 300 --------AAGACYSWGAGEGRERTSVMVGGFLGHRSLDDAARPRRVEGLAGVRAVDCAA 351

Query: 462 SCGHSLTVALTTTGHVYTM 480
              HSL   L+  G VY+ 
Sbjct: 352 GALHSLV--LSAAGDVYSF 368



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 153/330 (46%), Gaps = 35/330 (10%)

Query: 236 QNIACGGRHAALVTKQGEVFSWGEELG--GRLGHGVDSDVSHPKLIDA--LKNINVELVA 291
           + +A G  H  +V   G + + G +    G LG G    V  P  + A  L+ I+   VA
Sbjct: 79  RGVAAGTSHTVVVAHDGTLRACGTDPTRRGFLGQGPVFRVHRPARVPAGGLRFIS---VA 135

Query: 292 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
               HT A+T SG++Y++G   C  G LGHG++ S   P++++  L G  V +VSCG  H
Sbjct: 136 THSFHTLALTASGEVYSFGHGGC--GQLGHGDQESSATPRRVDA-LAGAFVVAVSCGQQH 192

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +  +T  G  + FG G  G  G GD+ S S PR V  +     V  A G  H+ A     
Sbjct: 193 SLALTDRGAPYAFGSGFGGKTGLGDQRSRSLPRRVAGIPEPVAVLTA-GAHHSLAAT--- 248

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                    +SG ++ +G     +LG  ++     P  V AL +    Q+S G   ++A+
Sbjct: 249 ---------TSGAVYAFGSNVHLQLGLPERGDAYAPRRVDAL-DGRVVQLSGGEHHSLAV 298

Query: 472 TTTGHVYTMGS---------PVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVA 521
              G  Y+ G+          V G LG     +   P RVEG L      + A G  H  
Sbjct: 299 DAAGACYSWGAGEGRERTSVMVGGFLGHRSLDDAARPRRVEG-LAGVRAVDCAAGALHSL 357

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
           VL++  +VY++G G  GRLGHGD+  R  P
Sbjct: 358 VLSAAGDVYSFGHGGGGRLGHGDSAMRWVP 387



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 26/225 (11%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G+V+ +G   G G LG G   S         S  P+ V++     V  ++CG +H+  +T
Sbjct: 148 GEVYSFGH-GGCGQLGHGDQES---------SATPRRVDALAGAFVVAVSCGQQHSLALT 197

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
            +G  +++G   GG+ G G     S P+ +  +    V ++  G HH+ A T SG +Y +
Sbjct: 198 DRGAPYAFGSGFGGKTGLGDQRSRSLPRRVAGIPE-PVAVLTAGAHHSLAATTSGAVYAF 256

Query: 310 GGS-NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG- 367
           G + +   GL   G+  +   P++++  L+G  V  +S G  H+  V +AG  +++G G 
Sbjct: 257 GSNVHLQLGLPERGDAYA---PRRVDA-LDG-RVVQLSGGEHHSLAVDAAGACYSWGAGE 311

Query: 368 --------TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
                     G LGH      + PR V+ L G+R V  A G  H+
Sbjct: 312 GRERTSVMVGGFLGHRSLDDAARPRRVEGLAGVRAVDCAAGALHS 356


>gi|260792916|ref|XP_002591460.1| hypothetical protein BRAFLDRAFT_205444 [Branchiostoma floridae]
 gi|229276665|gb|EEN47471.1| hypothetical protein BRAFLDRAFT_205444 [Branchiostoma floridae]
          Length = 689

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 136/293 (46%), Gaps = 29/293 (9%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F+P+ +E    + ++ ++CG    A +T +G + ++G    G LGHG  +DV   K+++A
Sbjct: 388 FIPRFLEGQSGVTIKQVSCGDLFTACLTDRGILMTFGSGTNGCLGHGQTNDVQQAKIVEA 447

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           L    V LV+CG  H  AVT   ++++WG    + G LG GN  S   P+ +  P+   H
Sbjct: 448 LLGFEVTLVSCGATHVMAVTNEHEVFSWGRG--DHGRLGLGNRESYSTPQPV--PIPSPH 503

Query: 342 -VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG------------HGDRISVSTPREVDS 388
            V SV CG   + ++T+  +L   G      LG              D + V  P     
Sbjct: 504 LVKSVHCGVDCSILLTTDNRLLGCGSNRHNKLGLDILPADDSPSQQIDEMCVFVPASSAP 563

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
           L   R    A G  H+AA+ E            SG+ +T+G  +  +LG+        P 
Sbjct: 564 LLTTRIAAVALGTSHSAAITE------------SGQCYTFGANNFNQLGYQKDSKDRRPQ 611

Query: 449 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV 501
            V AL +     V CG + TVA+TT G VYT G    G+LG  + N K+P  V
Sbjct: 612 LVPALEDVCISMVECGDTFTVAITTEGEVYTWGKGSRGRLGRREENTKIPKPV 664



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 150/339 (44%), Gaps = 43/339 (12%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           VFSWG    G +   V   + H        +  V  V+ G      VT +G +  W    
Sbjct: 322 VFSWG----GGITQPVKLQLPH-------SDTQVMQVSTGRTQKAGVTRNGRLIMWEVPT 370

Query: 314 C--NFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
              +  + G  +  +L ++P+ L G   G+ +  VSCG   TA +T  G L TFG GT G
Sbjct: 371 VATDAAMPGATDHAALQFIPRFLEGQ-SGVTIKQVSCGDLFTACLTDRGILMTFGSGTNG 429

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LGHG    V   + V++L G      +CG  H  AV             +  ++F+WG 
Sbjct: 430 CLGHGQTNDVQQAKIVEALLGFEVTLVSCGATHVMAVT------------NEHEVFSWGR 477

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
           GD GRLG G++E+   P  V  +  P+  + V CG   ++ LTT   +   GS  + +LG
Sbjct: 478 GDHGRLGLGNRESYSTPQPVP-IPSPHLVKSVHCGVDCSILLTTDNRLLGCGSNRHNKLG 536

Query: 490 -DPKANGKLPTRV-----------EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
            D       P++               L    +  +A G  H A +T   + YT+G    
Sbjct: 537 LDILPADDSPSQQIDEMCVFVPASSAPLLTTRIAAVALGTSHSAAITESGQCYTFGANNF 596

Query: 538 GRLGH-GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +LG+  D+ DR  P LV AL+D  +  + CG +FT AI
Sbjct: 597 NQLGYQKDSKDRR-PQLVPALEDVCISMVECGDTFTVAI 634



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 154/345 (44%), Gaps = 21/345 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSW-------GEELGGRLGHGVDSDVSHPKLIDALKNINV 287
           V  ++ G    A VT+ G +  W          + G   H     +  P+ ++    + +
Sbjct: 344 VMQVSTGRTQKAGVTRNGRLIMWEVPTVATDAAMPGATDHAALQFI--PRFLEGQSGVTI 401

Query: 288 ELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 346
           + V+CG+  T  +T  G + T+G G+N   G LGHG    +   K +   L G  V+ VS
Sbjct: 402 KQVSCGDLFTACLTDRGILMTFGSGTN---GCLGHGQTNDVQQAKIVEA-LLGFEVTLVS 457

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 406
           CG  H   VT+  ++F++G G  G LG G+R S STP+ V            CGV  +  
Sbjct: 458 CGATHVMAVTNEHEVFSWGRGDHGRLGLGNRESYSTPQPVPIPSPHLVKSVHCGVDCSIL 517

Query: 407 VV--EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
           +     ++G  S+ +   G      D    +    D+    VP   A L+      V+ G
Sbjct: 518 LTTDNRLLGCGSNRHNKLGLDILPADDSPSQ--QIDEMCVFVPASSAPLLTTRIAAVALG 575

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
            S + A+T +G  YT G+  + QLG  K +     ++   L    +  + CGD     +T
Sbjct: 576 TSHSAAITESGQCYTFGANNFNQLGYQKDSKDRRPQLVPALEDVCISMVECGDTFTVAIT 635

Query: 525 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDK--QVKSIVC 567
           +  EVYTWGKG+ GRLG  + ++   P  V  L  +  Q+ SI C
Sbjct: 636 TEGEVYTWGKGSRGRLGRRE-ENTKIPKPVPLLDSEPFQIISISC 679



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 10/143 (6%)

Query: 218 KMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           +M  FVP +    +   +  +A G  H+A +T+ G+ +++G     +LG+  DS    P+
Sbjct: 552 EMCVFVPASSAPLLTTRIAAVALGTSHSAAITESGQCYTFGANNFNQLGYQKDSKDRRPQ 611

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGP 336
           L+ AL+++ + +V CG+  T A+T  G++YTWG GS    G LG   E +  +PK +  P
Sbjct: 612 LVPALEDVCISMVECGDTFTVAITTEGEVYTWGKGSR---GRLGRREE-NTKIPKPV--P 665

Query: 337 L---EGIHVSSVSCGPWHTAVVT 356
           L   E   + S+SC   +T + T
Sbjct: 666 LLDSEPFQIISISCSHGNTLLAT 688


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 19/284 (6%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           ++ ++A G   +  + + G +F WG  L G L    DS +  PKL+D + + +V  VACG
Sbjct: 82  EIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS-LHEPKLLDKIMHWSVVQVACG 140

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
             H  A+T  G + +WG SN   G LG G+    +L   +   L    +S +  G +H+ 
Sbjct: 141 AQHCIALTEEGTILSWG-SNTQ-GQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSG 198

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISV-STPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           V++ +G LFT+G   +G LGHG+  S  S+PR V +L+    V  A G  H+        
Sbjct: 199 VLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVC------ 252

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                    +G +F+WG G  G+LGH        P  +  L+    CQ+ CG   T++LT
Sbjct: 253 ------RTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLT 306

Query: 473 TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIAC 515
               +   G     QLG     + +LP  +   LT +   +++C
Sbjct: 307 DKRKLLGFGLNSNNQLGTHNDTSARLPITIPISLTDD--RQLSC 348



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 127/277 (45%), Gaps = 20/277 (7%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           GD F         + G G   +G     K DS   PK ++  +   V  +ACG +H   +
Sbjct: 89  GDFFSIAIAESGLLFGWGRSLNGELM-CKQDSLHEPKLLDKIMHWSVVQVACGAQHCIAL 147

Query: 249 TKQGEVFSWGEELGGRLGHGV-DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           T++G + SWG    G+LG G  + +   P +I +L    +  +  G +H+  ++ SG ++
Sbjct: 148 TEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLF 207

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           TWG +N  +G LGHGN  S     +L   L    V  V+ G  H+   T  G +F++G G
Sbjct: 208 TWGKNN--WGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHG 265

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G LGH    +V+ P+++  L G    +  CG  HT ++ +              KL  
Sbjct: 266 GNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTD------------KRKLLG 313

Query: 428 WGDGDRGRLG-HGDKEARLVPTCVAALVEPNFCQVSC 463
           +G     +LG H D  ARL  T   +L +    Q+SC
Sbjct: 314 FGLNSNNQLGTHNDTSARLPITIPISLTDDR--QLSC 348



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 151/339 (44%), Gaps = 24/339 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V +IA G RH   +T   +V+S G    G+LG         P L+       +  VA G+
Sbjct: 33  VISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGFGAEEIFHVAAGD 90

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
             + A+  SG ++ WG S  N  L+   +  SL  PK L+  +    V  V+CG  H   
Sbjct: 91  FFSIAIAESGLLFGWGRS-LNGELMCKQD--SLHEPKLLDKIMHW-SVVQVACGAQHCIA 146

Query: 355 VTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           +T  G + ++G  T G LG G   I    P  + SL      +   G +H+  +      
Sbjct: 147 LTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVL------ 200

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEA-RLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   SG LFTWG  + G+LGHG+ ++ +  P  V  L       V+ G   +V  T
Sbjct: 201 ------SPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254

Query: 473 TTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
             G V++ G    GQLG +  AN   P ++  +L    V +I CG  H   LT + ++  
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKIM-ELMGTTVCQICCGRRHTISLTDKRKLLG 313

Query: 532 WGKGANGRLG-HGDTDDRNFPSL-VEALKDKQVKSIVCG 568
           +G  +N +LG H DT  R   ++ +    D+Q+  I  G
Sbjct: 314 FGLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIAAG 352



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 147/325 (45%), Gaps = 23/325 (7%)

Query: 254 VFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           ++ WG+   G+LG G ++  +S P  IDA  N +V  +A G  HT  +T +  +Y+ G +
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPIDA--NQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
              FG LG   + S   P  + G      +  V+ G + +  +  +G LF +G    G L
Sbjct: 59  E--FGQLGQ--QKSQCRPSLVTG-FGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGEL 113

Query: 373 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
               + S+  P+ +D +     V+ ACG  H  A+ E             G + +WG   
Sbjct: 114 -MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTE------------EGTILSWGSNT 160

Query: 433 RGRLGHGDKEARLV-PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
           +G+LG G  E   + PT +A+L      Q+  G   +  L+ +G ++T G   +GQLG  
Sbjct: 161 QGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHG 220

Query: 492 KANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
            ++  +   R+   L    V  +A G+ H    T    V++WG G NG+LGH    +   
Sbjct: 221 NSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQ 280

Query: 551 PSLVEALKDKQVKSIVCGTSFTAAI 575
           P  +  L    V  I CG   T ++
Sbjct: 281 PKKIMELMGTTVCQICCGRRHTISL 305


>gi|405964700|gb|EKC30153.1| Serine/threonine-protein kinase Nek8 [Crassostrea gigas]
          Length = 774

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 149/337 (44%), Gaps = 40/337 (11%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           VF WG         GV S V   KL     +  V  V+ G     AVT +G ++ W  SN
Sbjct: 314 VFFWGI--------GVSSPV---KLPLPSSDTQVTQVSTGRTQKAAVTKNGRLFVWESSN 362

Query: 314 CNFGLLGHGNEMS---LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
                L  G   S    ++P+ L G   G+++  V+CG   TA +T  G L TFG G +G
Sbjct: 363 VGTDTLIPGATESHTLTYVPRYLEGQ-SGVNIQQVACGDLFTACLTDRGILMTFGSGVYG 421

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LGHG+   V+  + V+ L G   V+ +CG  H  AV             +  ++F+WG 
Sbjct: 422 CLGHGNYNDVAQAKIVEDLLGYEVVQVSCGASHVLAVT------------NEHEVFSWGR 469

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 490
           GD GRLG GD+E+   P  V          V CG   ++ LT    +   GS  Y +L  
Sbjct: 470 GDNGRLGLGDQESHSSPRPVVIPEPLRPSSVHCGVDCSMILTLDNKLLCCGSNRYNKLAL 529

Query: 491 P---------KANGKLPTRVEGK---LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
                     K   ++ T V+     +    V+ +A G  H A +T   + YT+G    G
Sbjct: 530 DVIATDGTCMKLVDEIHTFVQTASHPIGNLLVKGVAMGTSHTAAVTVEGQCYTFGTNQFG 589

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG+   + R  P  V+  + ++V  + CG +FT  +
Sbjct: 590 QLGNQTNNSRQ-PQEVKIAQTQKVAMVACGDTFTVIV 625



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 149/322 (46%), Gaps = 17/322 (5%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-----PKLIDALKNINVE 288
            V  ++ G    A VTK G +F W     G       +  SH     P+ ++    +N++
Sbjct: 335 QVTQVSTGRTQKAAVTKNGRLFVWESSNVGTDTLIPGATESHTLTYVPRYLEGQSGVNIQ 394

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            VACG+  T  +T  G + T+G     +G LGHGN   +   K +   L G  V  VSCG
Sbjct: 395 QVACGDLFTACLTDRGILMTFGSG--VYGCLGHGNYNDVAQAKIVED-LLGYEVVQVSCG 451

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             H   VT+  ++F++G G  G LG GD+ S S+PR V   + LR     CGV  +  + 
Sbjct: 452 ASHVLAVTNEHEVFSWGRGDNGRLGLGDQESHSSPRPVVIPEPLRPSSVHCGVDCSMILT 511

Query: 409 ----EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
                +  GS+  +  +   + T  DG   +L   D+    V T    +       V+ G
Sbjct: 512 LDNKLLCCGSNRYNKLALDVIAT--DGTCMKL--VDEIHTFVQTASHPIGNLLVKGVAMG 567

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
            S T A+T  G  YT G+  +GQLG+   N + P  V+   T+  V  +ACGD    ++ 
Sbjct: 568 TSHTAAVTVEGQCYTFGTNQFGQLGNQTNNSRQPQEVKIAQTQK-VAMVACGDTFTVIVA 626

Query: 525 SRTEVYTWGKGANGRLGHGDTD 546
              EVY++G  + GRLG  + D
Sbjct: 627 DEGEVYSFGNQSRGRLGRPEED 648



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 142/286 (49%), Gaps = 16/286 (5%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
           ++VP+ +E    +++Q +ACG    A +T +G + ++G  + G LGHG  +DV+  K+++
Sbjct: 379 TYVPRYLEGQSGVNIQQVACGDLFTACLTDRGILMTFGSGVYGCLGHGNYNDVAQAKIVE 438

Query: 281 ALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
            L    V  V+CG  H  AVT   ++++WG G N   G LG G++ S   P+ +  P E 
Sbjct: 439 DLLGYEVVQVSCGASHVLAVTNEHEVFSWGRGDN---GRLGLGDQESHSSPRPVVIP-EP 494

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV--STPREVDSLKGLRTVRA 397
           +  SSV CG   + ++T   +L   G   +  L   D I+   +  + VD +     V+ 
Sbjct: 495 LRPSSVHCGVDCSMILTLDNKLLCCGSNRYNKLAL-DVIATDGTCMKLVDEIHTF--VQT 551

Query: 398 ACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP 456
           A        V  V +G+S ++  +  G+ +T+G    G+LG+    +R  P  V      
Sbjct: 552 ASHPIGNLLVKGVAMGTSHTAAVTVEGQCYTFGTNQFGQLGNQTNNSRQ-PQEVKIAQTQ 610

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG----DPKANGKLP 498
               V+CG + TV +   G VY+ G+   G+LG    DP   GK+P
Sbjct: 611 KVAMVACGDTFTVIVADEGEVYSFGNQSRGRLGRPEEDPTEPGKVP 656



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 5/161 (3%)

Query: 422 SGKLFTWGDGDRGR--LGHGDKEAR---LVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 476
           +G+LF W   + G   L  G  E+     VP  +      N  QV+CG   T  LT  G 
Sbjct: 352 NGRLFVWESSNVGTDTLIPGATESHTLTYVPRYLEGQSGVNIQQVACGDLFTACLTDRGI 411

Query: 477 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 536
           + T GS VYG LG    N     ++   L    V +++CG  HV  +T+  EV++WG+G 
Sbjct: 412 LMTFGSGVYGCLGHGNYNDVAQAKIVEDLLGYEVVQVSCGASHVLAVTNEHEVFSWGRGD 471

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 577
           NGRLG GD +  + P  V   +  +  S+ CG   +  + L
Sbjct: 472 NGRLGLGDQESHSSPRPVVIPEPLRPSSVHCGVDCSMILTL 512



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 218 KMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 277
           ++ +FV  A      L V+ +A G  H A VT +G+ +++G    G+LG+  ++    P+
Sbjct: 544 EIHTFVQTASHPIGNLLVKGVAMGTSHTAAVTVEGQCYTFGTNQFGQLGNQTNNS-RQPQ 602

Query: 278 LIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 324
            +   +   V +VACG+  T  V   G++Y++G  N + G LG   E
Sbjct: 603 EVKIAQTQKVAMVACGDTFTVIVADEGEVYSFG--NQSRGRLGRPEE 647


>gi|307107146|gb|EFN55390.1| hypothetical protein CHLNCDRAFT_57991 [Chlorella variabilis]
          Length = 596

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 172/367 (46%), Gaps = 49/367 (13%)

Query: 217 VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG--VDSDVS 274
           V+ D  VP    +   + +  ++ G  H+A ++++GE+++WG    G LGHG     +VS
Sbjct: 205 VERDVKVPLYQGAPDDIHLAVVSAGSSHSASISRRGELYTWGLASSGELGHGGWTPIEVS 264

Query: 275 HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
            P++I +L+   +  V+CG +HT A++ +G +++ G      G LGHG+     L   L 
Sbjct: 265 CPRMITSLQRTRIVSVSCGANHTLAISETGQLWSCG--RGRHGQLGHGHFHDEGL-LMLV 321

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-----------ISVSTP 383
             +    V SV+ G  H+  + + G++FT+GD + G LGH              +S+  P
Sbjct: 322 DTIRHERVVSVAAGRAHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGPNPQPLSIPFP 381

Query: 384 REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTWGDGDRG--RLGHGD 440
           + + SL+  R       +   A V  +  G   S   + +G L  +G    G  RLG GD
Sbjct: 382 QAIQSLEPAR-------LKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGD 434

Query: 441 KEARLVPTCVAALVEPN------FCQVSCGHSLTVALTTT-GH--VYTMGSPVYGQLGDP 491
              R++PT V   +E          QV CG   T+AL    GH  V ++G   YG+LG  
Sbjct: 435 TLDRMIPTEVPLALESEGGQLVRAMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELG-- 492

Query: 492 KANGKLPTRVEGK-------LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 544
                L  R+E         L    +  ++ GD+H A +     +Y WG+G  G+LG GD
Sbjct: 493 -----LGDRLERHRFHPIPALKGKSIVCVSVGDWHNAAICQDGRLYVWGRGDCGQLGLGD 547

Query: 545 TDDRNFP 551
             +R  P
Sbjct: 548 DRNRWAP 554



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 160/356 (44%), Gaps = 63/356 (17%)

Query: 269 VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLW 328
           V+ DV  P    A  +I++ +V+ G  H+ +++  G++YTWG ++   G LGHG     W
Sbjct: 205 VERDVKVPLYQGAPDDIHLAVVSAGSSHSASISRRGELYTWGLASS--GELGHGG----W 258

Query: 329 LPKKLNGP-----LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 383
            P +++ P     L+   + SVSCG  HT  ++  GQL++ G G  G LGHG        
Sbjct: 259 TPIEVSCPRMITSLQRTRIVSVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLL 318

Query: 384 REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA 443
             VD+++  R V  A G  H+ A+             + GK+FTWGD  +G+LGH    A
Sbjct: 319 MLVDTIRHERVVSVAAGRAHSVAL------------AADGKIFTWGDASKGQLGHAQLAA 366

Query: 444 RL-----------VPTCVAALVEP-------NFCQVSCGHSLTVALTTTGHVYTMGSPVY 485
            +            P  + +L EP           ++ G   ++A+T  G +   GS  +
Sbjct: 367 VMQGPNPQPLSIPFPQAIQSL-EPARLKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKH 425

Query: 486 GQ----LGDPKANGKLPTRVE-------GKLTKNFVEEIACGDYHVAVLTS---RTEVYT 531
           GQ     GD   +  +PT V        G+L +    ++ CG  H   L       +V +
Sbjct: 426 GQARLGTGD-TLDRMIPTEVPLALESEGGQLVRAM--QVHCGAQHTLALVQVQGHHQVRS 482

Query: 532 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 583
            G  + G LG GD  +R+    + ALK K +  +  G    AAIC    L+ W  G
Sbjct: 483 VGGNSYGELGLGDRLERHRFHPIPALKGKSIVCVSVGDWHNAAICQDGRLYVWGRG 538



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 142/338 (42%), Gaps = 78/338 (23%)

Query: 178 SQGSGHDDGDSL-GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQ 236
           S GS H    S  G+++ WG  +  G LG G           ++   P+ + S     + 
Sbjct: 227 SAGSSHSASISRRGELYTWGLAS-SGELGHG-------GWTPIEVSCPRMITSLQRTRIV 278

Query: 237 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 296
           +++CG  H   +++ G+++S G    G+LGHG   D     L+D +++  V  VA G  H
Sbjct: 279 SVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLMLVDTIRHERVVSVAAGRAH 338

Query: 297 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL---PKKLNGPL-EGIH----------- 341
           + A+   G ++TWG  + + G LGH    ++     P+ L+ P  + I            
Sbjct: 339 SVALAADGKIFTWG--DASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPA 396

Query: 342 -VSSVSCGPWHTAVVTSAGQLFTFGDGTFGV--LGHGDRISVSTPREV------DSLKGL 392
            V++++ G  H+  VT AG L  FG    G   LG GD +    P EV      +  + +
Sbjct: 397 RVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPLALESEGGQLV 456

Query: 393 RTVRAACGVWHTAAVVEVM-------VGSSS----------------------------- 416
           R ++  CG  HT A+V+V        VG +S                             
Sbjct: 457 RAMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPIPALKGKSIVCV 516

Query: 417 -------SSNCSSGKLFTWGDGDRGRLGHGDKEARLVP 447
                  ++ C  G+L+ WG GD G+LG GD   R  P
Sbjct: 517 SVGDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWAP 554



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 9/147 (6%)

Query: 435 RLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN 494
           R+G  +++ + VP    A  + +   VS G S + +++  G +YT G    G+LG     
Sbjct: 201 RVGAVERDVK-VPLYQGAPDDIHLAVVSAGSSHSASISRRGELYTWGLASSGELGH---G 256

Query: 495 GKLPT-----RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 549
           G  P      R+   L +  +  ++CG  H   ++   ++++ G+G +G+LGHG   D  
Sbjct: 257 GWTPIEVSCPRMITSLQRTRIVSVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEG 316

Query: 550 FPSLVEALKDKQVKSIVCGTSFTAAIC 576
              LV+ ++ ++V S+  G + + A+ 
Sbjct: 317 LLMLVDTIRHERVVSVAAGRAHSVALA 343



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 10/161 (6%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGG--RLGHGVDSDVSHPKLID-ALKNINVELVA 291
           V  IA GG H+  VT  G + ++G    G  RLG G   D   P  +  AL++   +LV 
Sbjct: 398 VTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPLALESEGGQLVR 457

Query: 292 -----CGEHHTCA-VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 345
                CG  HT A V + G          ++G LG G+ +       +   L+G  +  V
Sbjct: 458 AMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPIPA-LKGKSIVCV 516

Query: 346 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 386
           S G WH A +   G+L+ +G G  G LG GD  +   P+++
Sbjct: 517 SVGDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWAPKQL 557


>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 260

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 106/176 (60%), Gaps = 4/176 (2%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ IACGGRH+A++T  G V ++G  L G+ G G   D   P  + +L  I +E VA G 
Sbjct: 85  IKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGL 144

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTA 353
            HT   +  GD+Y +GG+   FG LG G++ +  LP+ L+ P LE ++V ++SCG  HTA
Sbjct: 145 WHTVCTSADGDVYAFGGN--QFGQLGTGSDQAETLPRLLDCPSLENVNVKTISCGARHTA 202

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           +VT  G++F++G   +G LG GD I  + P EV +++G      ACG WHT  + E
Sbjct: 203 LVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV-AIEGCIAKNVACGWWHTLLLAE 257



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 35/252 (13%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRA 397
           G+ ++SV+ G  HT V++  GQ++ +G G  G LG G R+  VS+P  +  +     V+ 
Sbjct: 10  GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQG 69

Query: 398 -------------------ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGH 438
                              ACG  H+A + +            +G +  +G G  G+ G 
Sbjct: 70  SMSSEGHNFRIPGSCIKAIACGGRHSAVITD------------AGAVLAFGWGLYGQCGQ 117

Query: 439 GDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-L 497
           G  +  L PTCV++L+      V+ G   TV  +  G VY  G   +GQLG      + L
Sbjct: 118 GSTDDELSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETL 177

Query: 498 PTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA 556
           P  ++    +N  V+ I+CG  H A++T   +V++WG    G+LG GD  DRN PS V A
Sbjct: 178 PRLLDCPSLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV-A 236

Query: 557 LKDKQVKSIVCG 568
           ++    K++ CG
Sbjct: 237 IEGCIAKNVACG 248



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 46/269 (17%)

Query: 233 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNIN----- 286
           + + ++A GGRH  +++  G+V+ WG    G+LG G     VS P +I  + + +     
Sbjct: 11  VKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQGS 70

Query: 287 --------------VELVACGEHHTCAVTLSGDM--YTWGGSNCNFGLLGHGNEMSLWLP 330
                         ++ +ACG  H+  +T +G +  + WG     +G  G G+      P
Sbjct: 71  MSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWG----LYGQCGQGSTDDELSP 126

Query: 331 KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD--S 388
             ++  L GI +  V+ G WHT   ++ G ++ FG   FG LG G   + + PR +D  S
Sbjct: 127 TCVS-SLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPS 185

Query: 389 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPT 448
           L+ +     +CG  HTA V +            +GK+F+WG    G+LG GD   R +P+
Sbjct: 186 LENVNVKTISCGARHTALVTD------------NGKVFSWGWNKYGQLGLGDVIDRNIPS 233

Query: 449 CVAALVEPNFCQ-VSCG--HSLTVALTTT 474
            VA  +E    + V+CG  H+L +A + T
Sbjct: 234 EVA--IEGCIAKNVACGWWHTLLLAESPT 260



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 80/138 (57%), Gaps = 6/138 (4%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D   P  V S + + ++ +A G  H    +  G+V+++G    G+LG G D   + P+L+
Sbjct: 122 DELSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLL 181

Query: 280 D--ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL 337
           D  +L+N+NV+ ++CG  HT  VT +G +++WG +   +G LG G+ +   +P ++   +
Sbjct: 182 DCPSLENVNVKTISCGARHTALVTDNGKVFSWGWN--KYGQLGLGDVIDRNIPSEV--AI 237

Query: 338 EGIHVSSVSCGPWHTAVV 355
           EG    +V+CG WHT ++
Sbjct: 238 EGCIAKNVACGWWHTLLL 255



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 24/176 (13%)

Query: 423 GKLFTWGDGDRGRLGHGDKEARLVPT-----CV--AALVE------------PNFC--QV 461
           G+++ WG G  G+LG G +  R+V +     C+  ++LV+            P  C   +
Sbjct: 30  GQVWGWGYGGEGQLGLGSR-VRMVSSPHIIPCIDSSSLVQGSMSSEGHNFRIPGSCIKAI 88

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 521
           +CG   +  +T  G V   G  +YGQ G    + +L       L    +E +A G +H  
Sbjct: 89  ACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLWHTV 148

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE--ALKDKQVKSIVCGTSFTAAI 575
             ++  +VY +G    G+LG G       P L++  +L++  VK+I CG   TA +
Sbjct: 149 CTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLENVNVKTISCGARHTALV 204


>gi|356569137|ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Glycine max]
          Length = 472

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 103/176 (58%), Gaps = 4/176 (2%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ IACGGRH+A++T  G V ++G  L G+ G G   D   P  + +L  I +E VA G 
Sbjct: 297 IKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPSCVSSLLGIQIEGVAAGL 356

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTA 353
            HT   ++ GD+Y +GG+   FG LG G + +  +P+ L+ P LE ++V  +SCG  HTA
Sbjct: 357 WHTVCTSVDGDVYAFGGN--QFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGARHTA 414

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           ++   G++F +G   +G LG GD I  + P EV +++G      ACG WHT  + E
Sbjct: 415 LIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEV-TIEGCVAKNVACGWWHTLLLAE 469



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 39/256 (15%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLK------- 390
           G+ ++SV+ G  HT  ++  GQ++ +G G  G LG G RI  VS+P  V  +        
Sbjct: 218 GVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKD 277

Query: 391 ----------------GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRG 434
                           G      ACG  H+A + +            +G + T+G G  G
Sbjct: 278 MARVSISSDGQNFRVPGSYIKGIACGGRHSAVITD------------AGAVLTFGWGLYG 325

Query: 435 RLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN 494
           + G G  +  L P+CV++L+      V+ G   TV  +  G VY  G   +GQLG     
Sbjct: 326 QCGQGSTDDELSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQ 385

Query: 495 GK-LPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
            + +P  ++    +N  V+ I+CG  H A++    +V+ WG    G+LG GD  DRN PS
Sbjct: 386 AETIPRLLDCPSLENVNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPS 445

Query: 553 LVEALKDKQVKSIVCG 568
            V  ++    K++ CG
Sbjct: 446 EV-TIEGCVAKNVACG 460



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 50/284 (17%)

Query: 270 DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
           D+  + P L+     + +  VA G  HT A++  G ++ WG      G LG G+ + +  
Sbjct: 204 DTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGG--EGQLGLGSRIRMVS 261

Query: 330 PKKL-----------------------NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
              L                       N  + G ++  ++CG  H+AV+T AG + TFG 
Sbjct: 262 SPHLVPCINSSSYGKDMARVSISSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGW 321

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS--GK 424
           G +G  G G      +P  V SL G++    A G+WHT               C+S  G 
Sbjct: 322 GLYGQCGQGSTDDELSPSCVSSLLGIQIEGVAAGLWHTV--------------CTSVDGD 367

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCV--AALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           ++ +G    G+LG G  +A  +P  +   +L   N  ++SCG   T  +   G V+  G 
Sbjct: 368 VYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGARHTALIADNGKVFCWGW 427

Query: 483 PVYGQLG-DPKANGKLPTRV--EGKLTKNFVEEIACGDYHVAVL 523
             YGQLG     +  +P+ V  EG + KN    +ACG +H  +L
Sbjct: 428 NKYGQLGLGDVIDRNIPSEVTIEGCVAKN----VACGWWHTLLL 467



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 6/138 (4%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D   P  V S + + ++ +A G  H    +  G+V+++G    G+LG G D   + P+L+
Sbjct: 334 DELSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLL 393

Query: 280 D--ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL 337
           D  +L+N+NV+ ++CG  HT  +  +G ++ WG +   +G LG G+ +   +P ++   +
Sbjct: 394 DCPSLENVNVKRISCGARHTALIADNGKVFCWGWNK--YGQLGLGDVIDRNIPSEVT--I 449

Query: 338 EGIHVSSVSCGPWHTAVV 355
           EG    +V+CG WHT ++
Sbjct: 450 EGCVAKNVACGWWHTLLL 467



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 145/386 (37%), Gaps = 63/386 (16%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKLIDALKNINVELV 290
           DV    CG   A  +++ G++ +WG      LG    +   H   P+       + +   
Sbjct: 50  DVCGGGCG--FAMAISEPGKLITWGST--DDLGQSYVTSGKHGETPEPFPLPTEVTIVKA 105

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCN-----FG--LLGHGNEMSLWLPKKLNGPLEGIHVS 343
           A G  H  +VT  G++YTWG   C      FG  L G   E  +  P++ +  L    VS
Sbjct: 106 AAGWAHCVSVTDCGEVYTWGWRECVPSGKVFGESLTGVSPEKDV--PRRQSSFLT-EQVS 162

Query: 344 SVSCGPWHTAVVTSAG--------QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 395
             S G   T    S          +  +    T       D    + P  V    G+R  
Sbjct: 163 PRSQGSKSTGGTASGTSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIA 222

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-----EARLVPTCV 450
             A G  HT A+ ++            G+++ WG G  G+LG G +        LVP   
Sbjct: 223 SVAAGGRHTLALSDI------------GQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCIN 270

Query: 451 AALVEPNFCQVS-------------------CGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
           ++    +  +VS                   CG   +  +T  G V T G  +YGQ G  
Sbjct: 271 SSSYGKDMARVSISSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQG 330

Query: 492 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
             + +L       L    +E +A G +H    +   +VY +G    G+LG G       P
Sbjct: 331 STDDELSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIP 390

Query: 552 SLVE--ALKDKQVKSIVCGTSFTAAI 575
            L++  +L++  VK I CG   TA I
Sbjct: 391 RLLDCPSLENVNVKRISCGARHTALI 416


>gi|356569139|ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Glycine max]
          Length = 459

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 103/176 (58%), Gaps = 4/176 (2%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ IACGGRH+A++T  G V ++G  L G+ G G   D   P  + +L  I +E VA G 
Sbjct: 284 IKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPSCVSSLLGIQIEGVAAGL 343

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTA 353
            HT   ++ GD+Y +GG+   FG LG G + +  +P+ L+ P LE ++V  +SCG  HTA
Sbjct: 344 WHTVCTSVDGDVYAFGGN--QFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGARHTA 401

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           ++   G++F +G   +G LG GD I  + P EV +++G      ACG WHT  + E
Sbjct: 402 LIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEV-TIEGCVAKNVACGWWHTLLLAE 456



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 39/256 (15%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLK------- 390
           G+ ++SV+ G  HT  ++  GQ++ +G G  G LG G RI  VS+P  V  +        
Sbjct: 205 GVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKD 264

Query: 391 ----------------GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRG 434
                           G      ACG  H+A + +            +G + T+G G  G
Sbjct: 265 MARVSISSDGQNFRVPGSYIKGIACGGRHSAVITD------------AGAVLTFGWGLYG 312

Query: 435 RLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN 494
           + G G  +  L P+CV++L+      V+ G   TV  +  G VY  G   +GQLG     
Sbjct: 313 QCGQGSTDDELSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQ 372

Query: 495 GK-LPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 552
            + +P  ++    +N  V+ I+CG  H A++    +V+ WG    G+LG GD  DRN PS
Sbjct: 373 AETIPRLLDCPSLENVNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPS 432

Query: 553 LVEALKDKQVKSIVCG 568
            V  ++    K++ CG
Sbjct: 433 EV-TIEGCVAKNVACG 447



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 50/284 (17%)

Query: 270 DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL 329
           D+  + P L+     + +  VA G  HT A++  G ++ WG      G LG G+ + +  
Sbjct: 191 DTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGG--EGQLGLGSRIRMVS 248

Query: 330 PKKL-----------------------NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 366
              L                       N  + G ++  ++CG  H+AV+T AG + TFG 
Sbjct: 249 SPHLVPCINSSSYGKDMARVSISSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGW 308

Query: 367 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS--GK 424
           G +G  G G      +P  V SL G++    A G+WHT               C+S  G 
Sbjct: 309 GLYGQCGQGSTDDELSPSCVSSLLGIQIEGVAAGLWHTV--------------CTSVDGD 354

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCV--AALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 482
           ++ +G    G+LG G  +A  +P  +   +L   N  ++SCG   T  +   G V+  G 
Sbjct: 355 VYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGARHTALIADNGKVFCWGW 414

Query: 483 PVYGQLG-DPKANGKLPTRV--EGKLTKNFVEEIACGDYHVAVL 523
             YGQLG     +  +P+ V  EG + KN    +ACG +H  +L
Sbjct: 415 NKYGQLGLGDVIDRNIPSEVTIEGCVAKN----VACGWWHTLLL 454



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 6/138 (4%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D   P  V S + + ++ +A G  H    +  G+V+++G    G+LG G D   + P+L+
Sbjct: 321 DELSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLL 380

Query: 280 D--ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL 337
           D  +L+N+NV+ ++CG  HT  +  +G ++ WG +   +G LG G+ +   +P ++   +
Sbjct: 381 DCPSLENVNVKRISCGARHTALIADNGKVFCWGWNK--YGQLGLGDVIDRNIPSEVT--I 436

Query: 338 EGIHVSSVSCGPWHTAVV 355
           EG    +V+CG WHT ++
Sbjct: 437 EGCVAKNVACGWWHTLLL 454



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 143/378 (37%), Gaps = 60/378 (15%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKLIDALKNINVELV 290
           DV    CG   A  +++ G++ +WG      LG    +   H   P+       + +   
Sbjct: 50  DVCGGGCG--FAMAISEPGKLITWGST--DDLGQSYVTSGKHGETPEPFPLPTEVTIVKA 105

Query: 291 ACGEHHTCAVTLSGDMYTWGGSNCN-----FG--LLGHGNEMSLWLPKKLNGPLEGIHVS 343
           A G  H  +VT  G++YTWG   C      FG  L G   E  +  P++ +    G   S
Sbjct: 106 AAGWAHCVSVTDCGEVYTWGWRECVPSGKVFGESLTGVSPEKDV--PRRQSSKSTGGTAS 163

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
             S         +S  +  +    T       D    + P  V    G+R    A G  H
Sbjct: 164 GTS------GEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRH 217

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK-----EARLVPTCVAALVEPNF 458
           T A+ ++            G+++ WG G  G+LG G +        LVP   ++    + 
Sbjct: 218 TLALSDI------------GQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDM 265

Query: 459 CQVS-------------------CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT 499
            +VS                   CG   +  +T  G V T G  +YGQ G    + +L  
Sbjct: 266 ARVSISSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSP 325

Query: 500 RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE--AL 557
                L    +E +A G +H    +   +VY +G    G+LG G       P L++  +L
Sbjct: 326 SCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSL 385

Query: 558 KDKQVKSIVCGTSFTAAI 575
           ++  VK I CG   TA I
Sbjct: 386 ENVNVKRISCGARHTALI 403


>gi|342181804|emb|CCC91283.1| putative regulator of chromosome condensation [Trypanosoma
           congolense IL3000]
          Length = 1149

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 182/432 (42%), Gaps = 68/432 (15%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V  +  G  H   +T  G V+SWG E  GRLGHG + +    ++IDAL +  +   +CG 
Sbjct: 553 VVALRAGPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDALSSHVIVDASCGC 612

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
            HT  +T  G +Y +G ++  FG LG   +    LP+ +  P   I    VSCG  HT +
Sbjct: 613 FHTAVLTKHGQVYVFGENS--FGQLGLKGQQPRLLPEVVPLPKRAI---VVSCGREHTCI 667

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH----------T 404
           +   G L   G      +G G     S PR +  L+    +  A G  H          T
Sbjct: 668 LLEDGDLMACGSVRSSGVGVGFGARFSVPRRI--LQNFLIMSVASGDLHAIASGTLRTMT 725

Query: 405 AAVVEVMVGSSSSSNCS--------------------------SGKLFTWGDGDRGRLGH 438
              V+   GS    N S                          +G+ F  G G  G+LG 
Sbjct: 726 LTAVQTPQGSPVDDNMSKLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGSNGQLGS 785

Query: 439 GDKEARLVPTCVAALVEPNF---CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-- 493
           GD +          +V P+F   C V CG S  +A+ ++G +Y+ G   +GQLG   A  
Sbjct: 786 GD-DTPAQRNLFRRVVVPDFEDVCAVDCGFSFAIAIGSSGALYSWGWNTHGQLGHGLAVE 844

Query: 494 ---NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
              +   P  +    T + V ++ACG   V  LT   EVYTWG+ A    GHG+  ++ F
Sbjct: 845 LGESVFTPKEISVVKTLSQVIQVACGGTFVVALTQCGEVYTWGEAA--FCGHGNGVEKFF 902

Query: 551 --PSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG-VDQSMCSGCRIP----FNFK 599
             P  + +L+D  + ++  G    AA+     ++ W +G V     +G  +P     NF 
Sbjct: 903 LCPKRLASLQD--ISAVAAGDRHAAALSYDHTIYAWGNGPVGNGGAAGVMVPTPVALNFV 960

Query: 600 RKRHNCYNCGLV 611
                 + CG V
Sbjct: 961 HPVRQLF-CGQV 971



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 168/401 (41%), Gaps = 72/401 (17%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWG--EELGGRLGHGVDSDVSHP------KLIDALKNI 285
           +V ++ACG  +AA+    G V +WG    L  ++      D   P      K I+  K  
Sbjct: 490 EVVDVACGSFYAAIAFSCGSVGTWGVSTMLATKVAKDQLRDADAPNNQKCAKTINLFKPF 549

Query: 286 NVELVA--CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG---NEMSLWLPKKLNGPLEGI 340
           N ++VA   G  H  A+T SG +Y+WG      G LGHG   NE  + +   L+  +   
Sbjct: 550 NKKVVALRAGPFHCLAITSSGAVYSWGMERN--GRLGHGDNKNEERMRVIDALSSHV--- 604

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL--RTVRAA 398
            +   SCG +HTAV+T  GQ++ FG+ +FG LG    +    PR +  +  L  R +  +
Sbjct: 605 -IVDASCGCFHTAVLTKHGQVYVFGENSFGQLG----LKGQQPRLLPEVVPLPKRAIVVS 659

Query: 399 CGVWHTAAVVE----VMVGSSSSSNCSSG---------------KLFTWGDGDRGRLGHG 439
           CG  HT  ++E    +  GS  SS    G                + +   GD   +  G
Sbjct: 660 CGREHTCILLEDGDLMACGSVRSSGVGVGFGARFSVPRRILQNFLIMSVASGDLHAIASG 719

Query: 440 DKEARL---VPTCVAALVEPNFCQVS------------CGHSLTVALTTTGHVYTMGSPV 484
                    V T   + V+ N  +++             G    V L  TG  + +G   
Sbjct: 720 TLRTMTLTAVQTPQGSPVDDNMSKLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGS 779

Query: 485 YGQLG---DPKANGKLPTRVEGKLTKNF--VEEIACGDYHVAVLTSRTEVYTWGKGANGR 539
            GQLG   D  A   L  RV   +  +F  V  + CG      + S   +Y+WG   +G+
Sbjct: 780 NGQLGSGDDTPAQRNLFRRV---VVPDFEDVCAVDCGFSFAIAIGSSGALYSWGWNTHGQ 836

Query: 540 LGHG---DTDDRNF-PSLVEALKD-KQVKSIVCGTSFTAAI 575
           LGHG   +  +  F P  +  +K   QV  + CG +F  A+
Sbjct: 837 LGHGLAVELGESVFTPKEISVVKTLSQVIQVACGGTFVVAL 877



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 33/265 (12%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNI------NVE 288
           ++++  G   A ++ + GE F+ G    G+LG G D+    P   +  + +      +V 
Sbjct: 753 LRSLCVGKDFAVILAETGEAFAIGCGSNGQLGSGDDT----PAQRNLFRRVVVPDFEDVC 808

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM----SLWLPKKLNGPLEGIHVSS 344
            V CG     A+  SG +Y+WG +    G LGHG  +    S++ PK+++       V  
Sbjct: 809 AVDCGFSFAIAIGSSGALYSWGWNT--HGQLGHGLAVELGESVFTPKEISVVKTLSQVIQ 866

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
           V+CG      +T  G+++T+G+  F   G+G       P+ + SL+ +  V  A G  H 
Sbjct: 867 VACGGTFVVALTQCGEVYTWGEAAFCGHGNGVEKFFLCPKRLASLQDISAV--AAGDRHA 924

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
           AA+                 ++ WG+G    +G+G     +VPT VA        Q+ CG
Sbjct: 925 AAL------------SYDHTIYAWGNGP---VGNGGAAGVMVPTPVALNFVHPVRQLFCG 969

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLG 489
              T  +T  G +Y  G    GQ G
Sbjct: 970 QVNTFVITDVGDLYVWGLNTSGQCG 994



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 150/386 (38%), Gaps = 56/386 (14%)

Query: 230 AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI----DALKNI 285
           A+ + V + +CG      +T   +VFS G +   +LG G   ++    ++       +  
Sbjct: 368 AIPVPVLSFSCGAYSCYFLTADNKVFSCGNDDWSQLGAGKSKELRSSSVVRHGEGKYRLF 427

Query: 286 NVEL--------VACGEHHTCAVTL-SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
            V L        +  G     A+ L S  MY WG +  +FG       +++  P  ++ P
Sbjct: 428 RVPLRSGDHICKLTAGSAFAAAIGLQSRRMYLWGQN--SFGQCLMEGSLTVSTPVAVDIP 485

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS-------- 388
            +   V  V+CG ++ A+  S G + T+G  T        +++    R+ D+        
Sbjct: 486 GQYSEVVDVACGSFYAAIAFSCGSVGTWGVSTM----LATKVAKDQLRDADAPNNQKCAK 541

Query: 389 ----LKGL--RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKE 442
                K    + V    G +H  A+             SSG +++WG    GRLGHGD +
Sbjct: 542 TINLFKPFNKKVVALRAGPFHCLAIT------------SSGAVYSWGMERNGRLGHGDNK 589

Query: 443 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVE 502
                  + AL        SCG   T  LT  G VY  G   +GQLG      +L   V 
Sbjct: 590 NEERMRVIDALSSHVIVDASCGCFHTAVLTKHGQVYVFGENSFGQLGLKGQQPRLLPEVV 649

Query: 503 GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQV 562
               +  V  ++CG  H  +L    ++   G   +  +G G     + P  +  L++  +
Sbjct: 650 PLPKRAIV--VSCGREHTCILLEDGDLMACGSVRSSGVGVGFGARFSVPRRI--LQNFLI 705

Query: 563 KSIVCGTSFTAAICLHKWVSGVDQSM 588
            S+  G        LH   SG  ++M
Sbjct: 706 MSVASGD-------LHAIASGTLRTM 724



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 33/285 (11%)

Query: 266 GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNE 324
           G  VD ++S  KL + +K   +  +  G+     +  +G+ +  G GSN   G LG G++
Sbjct: 734 GSPVDDNMS--KLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGSN---GQLGSGDD 788

Query: 325 MSLW--LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI---- 378
                 L +++  P +   V +V CG      + S+G L+++G  T G LGHG  +    
Sbjct: 789 TPAQRNLFRRVVVP-DFEDVCAVDCGFSFAIAIGSSGALYSWGWNTHGQLGHGLAVELGE 847

Query: 379 SVSTPREVDSLKGL-RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLG 437
           SV TP+E+  +K L + ++ ACG     A+ +             G+++TWG+      G
Sbjct: 848 SVFTPKEISVVKTLSQVIQVACGGTFVVALTQC------------GEVYTWGEAAFCGHG 895

Query: 438 HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL 497
           +G ++  L P  +A+L   +   V+ G     AL+    +Y  G+   G +G+  A G +
Sbjct: 896 NGVEKFFLCPKRLASL--QDISAVAAGDRHAAALSYDHTIYAWGN---GPVGNGGAAGVM 950

Query: 498 -PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
            PT V        V ++ CG  +  V+T   ++Y WG   +G+ G
Sbjct: 951 VPTPVALNFVHP-VRQLFCGQVNTFVITDVGDLYVWGLNTSGQCG 994



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 21/190 (11%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDS--FVPKAVESAVVL-DVQNIACGGRH 244
           S G ++ WG  T  G LG G+        V++    F PK +     L  V  +ACGG  
Sbjct: 822 SSGALYSWGWNT-HGQLGHGL-------AVELGESVFTPKEISVVKTLSQVIQVACGGTF 873

Query: 245 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
              +T+ GEV++WGE      G+GV+     PK + +L++I+   VA G+ H  A++   
Sbjct: 874 VVALTQCGEVYTWGEAAFCGHGNGVEKFFLCPKRLASLQDISA--VAAGDRHAAALSYDH 931

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVVTSAGQLFT 363
            +Y WG      G +G+G    + +P  +   L  +H V  + CG  +T V+T  G L+ 
Sbjct: 932 TIYAWGN-----GPVGNGGAAGVMVPTPV--ALNFVHPVRQLFCGQVNTFVITDVGDLYV 984

Query: 364 FGDGTFGVLG 373
           +G  T G  G
Sbjct: 985 WGLNTSGQCG 994



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 120/307 (39%), Gaps = 38/307 (12%)

Query: 304 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG------------IHVSSVSCGPWH 351
           G ++TWG    N   +  G ++ L  P     P +G            + V S SCG + 
Sbjct: 327 GVVFTWG----NVASVKTGKKLQLSSPSNSWDPPQGSYTLIPTRMAIPVPVLSFSCGAYS 382

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG-LRTVRAACGVWHTAAVVEV 410
              +T+  ++F+ G+  +  LG G    + +   V   +G  R  R    +     + ++
Sbjct: 383 CYFLTADNKVFSCGNDDWSQLGAGKSKELRSSSVVRHGEGKYRLFRVP--LRSGDHICKL 440

Query: 411 MVGSSSSS--NCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQV---SCG 464
             GS+ ++     S +++ WG   +   G    E  L V T VA  +   + +V   +CG
Sbjct: 441 TAGSAFAAAIGLQSRRMYLWG---QNSFGQCLMEGSLTVSTPVAVDIPGQYSEVVDVACG 497

Query: 465 HSLTVALTTTGHVYTMGSPVY-------GQLGDPKANGKLPTRVEGKLTKNF---VEEIA 514
                   + G V T G            QL D  A           L K F   V  + 
Sbjct: 498 SFYAAIAFSCGSVGTWGVSTMLATKVAKDQLRDADAPNNQKCAKTINLFKPFNKKVVALR 557

Query: 515 CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 574
            G +H   +TS   VY+WG   NGRLGHGD  +     +++AL    +    CG   TA 
Sbjct: 558 AGPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDALSSHVIVDASCGCFHTAV 617

Query: 575 ICLHKWV 581
           +  H  V
Sbjct: 618 LTKHGQV 624


>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
 gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
          Length = 413

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 184/387 (47%), Gaps = 47/387 (12%)

Query: 213 SYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
           S +G + +  + +A+ES    +  +++CGG H  ++T +G VF+ G    G+LG  + S+
Sbjct: 44  SESGSQFEPVLCRALESH---EPCSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKSE 100

Query: 273 VSH-PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWL- 329
            S  P  +    +  V  +A G +H+ A+T SG+ Y WG +  + G LG G    S+++ 
Sbjct: 101 SSFDPVEVHGFPDPCVH-IAAGRYHSAAITSSGETYVWGRN--SEGQLGLGKRAKSVYIT 157

Query: 330 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV--------- 380
           P+K+   L G+ + +++ G  H+  +   GQ+ ++G   FG LGHG+             
Sbjct: 158 PQKME-SLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNE 216

Query: 381 STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD 440
            TPR +  L+ L+    + G+ H+A   +            SG ++++G G   +LG G+
Sbjct: 217 YTPRIIHCLEKLQVRSVSAGLVHSACADD------------SGTIYSFGQGSMCQLGLGN 264

Query: 441 KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTR 500
                 P  +  L  P    +SCG   T A+T  G +YT GS  +G LG        P R
Sbjct: 265 NNDASQPCPIPDL--PRVSSISCGGYHTGAITQDGDIYTWGSNEHGCLGSGFRASSKPLR 322

Query: 501 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDR 548
           +E  L + F+ EI+CG  H A + S   +++WG G +            G+LG G   D 
Sbjct: 323 LE-SLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGGSYGTYATQAESSGGQLGVGTDFDF 380

Query: 549 NFPSLVEALKDKQVKSIVCGTSFTAAI 575
             P  +E         + CG + TAAI
Sbjct: 381 FEPVPIEMDDRLSALHVSCGFNHTAAI 407



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 136/306 (44%), Gaps = 50/306 (16%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           S G+ ++WG    +G LG G      Y         P+ +ES   + ++ +A G  H+  
Sbjct: 130 SSGETYVWGR-NSEGQLGLGKRAKSVY-------ITPQKMESLAGMRLKALALGTDHSLG 181

Query: 248 VTKQGEVFSWGEELGGRLGHG---------VDSDVSHPKLIDALKNINVELVACGEHHTC 298
           + + G+V SWG    G LGHG          D++   P++I  L+ + V  V+ G  H+ 
Sbjct: 182 LAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSA 241

Query: 299 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
               SG +Y++G GS C  GL G+ N+ S   P       +   VSS+SCG +HT  +T 
Sbjct: 242 CADDSGTIYSFGQGSMCQLGL-GNNNDASQPCPIP-----DLPRVSSISCGGYHTGAITQ 295

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G ++T+G    G LG G R S S P  ++SL        +CG  HTAA+          
Sbjct: 296 DGDIYTWGSNEHGCLGSGFRAS-SKPLRLESLAEAFMSEISCGWKHTAAI---------- 344

Query: 418 SNCSSGKLFTWGDGDR------------GRLGHGDKEARLVPTCVAALVEPNFCQVSCGH 465
              S G +F+WG G              G+LG G       P  +      +   VSCG 
Sbjct: 345 ---SDGYIFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGF 401

Query: 466 SLTVAL 471
           + T A+
Sbjct: 402 NHTAAI 407



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 146/332 (43%), Gaps = 33/332 (9%)

Query: 257 WGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 316
           WG    GRLG         P L  AL++     V+CG  HT  +T  G ++  G ++   
Sbjct: 33  WGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSS-- 90

Query: 317 GLLGHG-NEMSLWLPKKLNG-PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 374
           G LG      S + P +++G P   +H+++   G +H+A +TS+G+ + +G  + G LG 
Sbjct: 91  GQLGVPLKSESSFDPVEVHGFPDPCVHIAA---GRYHSAAITSSGETYVWGRNSEGQLGL 147

Query: 375 GDRIS--VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
           G R      TP++++SL G+R    A G  H+  + E            +G++ +WG   
Sbjct: 148 GKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAE------------TGQVLSWGTNR 195

Query: 433 RGRLGHGDKEA---------RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
            G LGHG+               P  +  L +     VS G   +     +G +Y+ G  
Sbjct: 196 FGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACADDSGTIYSFGQG 255

Query: 484 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 543
              QLG    N          L +  V  I+CG YH   +T   ++YTWG   +G LG G
Sbjct: 256 SMCQLGLGNNNDASQPCPIPDLPR--VSSISCGGYHTGAITQDGDIYTWGSNEHGCLGSG 313

Query: 544 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                  P  +E+L +  +  I CG   TAAI
Sbjct: 314 FRASSK-PLRLESLAEAFMSEISCGWKHTAAI 344



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 30/237 (12%)

Query: 190 GDVFIWGE----CTGDGILGGGIHRSGSYAGVK-MDSFVPKAVESAVVLDVQNIACGGRH 244
           G V  WG     C G G +      +G +   K  + + P+ +     L V++++ G  H
Sbjct: 186 GQVLSWGTNRFGCLGHGEM------TGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVH 239

Query: 245 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
           +A     G ++S+G+    +LG G ++D S P  I  L  ++   ++CG +HT A+T  G
Sbjct: 240 SACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVSS--ISCGGYHTGAITQDG 297

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           D+YTWG +    G LG G   S   P +L    E   +S +SCG  HTA + S G +F++
Sbjct: 298 DIYTWGSNE--HGCLGSGFRASS-KPLRLESLAEAF-MSEISCGWKHTAAI-SDGYIFSW 352

Query: 365 G----DGTF--------GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 409
           G     GT+        G LG G       P  ++    L  +  +CG  HTAA++E
Sbjct: 353 GWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILE 409


>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 488

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 155/334 (46%), Gaps = 34/334 (10%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKL 278
           +F P  +E      V  ++    H+A V + GEV + G+      GH +D+   +  PKL
Sbjct: 153 AFTP--IEFPFPAQVAQVSATQNHSAFVLQSGEVLTCGDNSSHCCGH-LDTSRPIFRPKL 209

Query: 279 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN---- 334
           ++ LK    + VA G H T  ++  G  YT G SN + G LGHG+ M    PK +     
Sbjct: 210 VEVLKGTPCKQVAAGLHFTVFLSREGHAYTCG-SNTH-GQLGHGDTMDRPAPKVVEFLKN 267

Query: 335 -GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK--G 391
            GP     V  ++ GP +   VT  G +++FG G+   LGHG++     PR + + K  G
Sbjct: 268 IGP-----VVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKG 322

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVA 451
           +  +R + G  H  A+             S+G+++TWG G  G LGHGD+  ++ P  + 
Sbjct: 323 IHILRVSAGDEHAVALD------------SNGRVYTWGKGYCGALGHGDENDKITPQVLV 370

Query: 452 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKN 508
            L      QV      T  L   G +Y  G   +G LG P    ++  L  RV   L  +
Sbjct: 371 NLKNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPH 430

Query: 509 FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
            V +++ G YH  V+T    ++ +G     +LGH
Sbjct: 431 RVSQVSTGLYHTIVVTQGGRIFGFGDNERAQLGH 464



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 131/286 (45%), Gaps = 20/286 (6%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F PK VE       + +A G      ++++G  ++ G    G+LGHG   D   PK+++ 
Sbjct: 205 FRPKLVEVLKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVVEF 264

Query: 282 LKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEG 339
           LKNI  V  +A G  +  AVT  G +Y++G S  NF  LGHG +     P+ +     +G
Sbjct: 265 LKNIGPVVQIAAGPSYVLAVTQDGSVYSFG-SGSNF-CLGHGEQQDELQPRVIQAFKRKG 322

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           IH+  VS G  H   + S G+++T+G G  G LGHGD     TP+ + +LK    V+   
Sbjct: 323 IHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKNCLAVQVCA 382

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK---EARLVPTCVAALVEP 456
               T  +VE             G L+ +G    G LG  D+   +  L P  +  L   
Sbjct: 383 RKRKTFVLVE------------GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPH 430

Query: 457 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRV 501
              QVS G   T+ +T  G ++  G     QLG     G L PT +
Sbjct: 431 RVSQVSTGLYHTIVVTQGGRIFGFGDNERAQLGHNSLRGCLEPTEI 476



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 129/278 (46%), Gaps = 27/278 (9%)

Query: 290 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS---LWLPKKLNGPLEGIHVSSVS 346
           +A G++HT  +  S  +Y+ G S    G+L HG E +    + P +   P +   V+ VS
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLS--GVLAHGPETTQCVAFTPIEFPFPAQ---VAQVS 169

Query: 347 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTA 405
               H+A V  +G++ T GD +    GH D    +  P+ V+ LKG    + A G+  T 
Sbjct: 170 ATQNHSAFVLQSGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEVLKGTPCKQVAAGLHFTV 229

Query: 406 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAAL--VEPNFCQVSC 463
            +               G  +T G    G+LGHGD   R  P  V  L  + P   Q++ 
Sbjct: 230 FLSR------------EGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLKNIGP-VVQIAA 276

Query: 464 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKN--FVEEIACGDYHVA 521
           G S  +A+T  G VY+ GS     LG  +   +L  RV     +    +  ++ GD H  
Sbjct: 277 GPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAV 336

Query: 522 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD 559
            L S   VYTWGKG  G LGHGD +D+  P ++  LK+
Sbjct: 337 ALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKN 374



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 144/343 (41%), Gaps = 25/343 (7%)

Query: 242 GRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAV 300
           G++  L+    +V+S G  L G L HG ++        I+      V  V+  ++H+  V
Sbjct: 119 GKYHTLLINNSKVYSCGVSLSGVLAHGPETTQCVAFTPIEFPFPAQVAQVSATQNHSAFV 178

Query: 301 TLSGDMYTWG--GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
             SG++ T G   S+C     GH +        KL   L+G     V+ G   T  ++  
Sbjct: 179 LQSGEVLTCGDNSSHC----CGHLDTSRPIFRPKLVEVLKGTPCKQVAAGLHFTVFLSRE 234

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL-RTVRAACGVWHTAAVVEVMVGSSSS 417
           G  +T G  T G LGHGD +    P+ V+ LK +   V+ A G  +  AV +        
Sbjct: 235 GHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLKNIGPVVQIAAGPSYVLAVTQ-------- 286

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEP--NFCQVSCGHSLTVALTTTG 475
                G ++++G G    LGHG+++  L P  + A      +  +VS G    VAL + G
Sbjct: 287 ----DGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNG 342

Query: 476 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 535
            VYT G    G LG    N K+  +V   L      ++        VL     +Y +G  
Sbjct: 343 RVYTWGKGYCGALGHGDENDKITPQVLVNLKNCLAVQVCARKRKTFVLVEGGLLYGFGWM 402

Query: 536 ANGRLGHGD---TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             G LG  D   +D    P ++E LK  +V  +  G   T  +
Sbjct: 403 GFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVV 445



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 22/224 (9%)

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS---VSTPREVDSLKGLRTVRAACGV 401
           ++ G +HT ++ ++ ++++ G    GVL HG   +     TP E      +  V A    
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLSGVLAHGPETTQCVAFTPIEFPFPAQVAQVSATQN- 173

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFCQ 460
            H+A V++            SG++ T GD      GH D    +  P  V  L      Q
Sbjct: 174 -HSAFVLQ------------SGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEVLKGTPCKQ 220

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF--VEEIACGDY 518
           V+ G   TV L+  GH YT GS  +GQLG      +   +V  +  KN   V +IA G  
Sbjct: 221 VAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVV-EFLKNIGPVVQIAAGPS 279

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQV 562
           +V  +T    VY++G G+N  LGHG+  D   P +++A K K +
Sbjct: 280 YVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGI 323


>gi|297816858|ref|XP_002876312.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297322150|gb|EFH52571.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 482

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/205 (39%), Positives = 114/205 (55%), Gaps = 15/205 (7%)

Query: 215 AGVKMDSFVPKAVESAVVLD--VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
           +GV M S     V+ A VL   V+ IACGGRH+A++T  G + ++G  L G+ G G   D
Sbjct: 289 SGVNMSS----EVQCARVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDD 344

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
              P  + +L  I +E VA G  HT   +  GD+Y++GG+   FG LG G + +  LPK 
Sbjct: 345 ELSPTCVSSLLGIRIEEVAAGLWHTICASADGDVYSFGGN--QFGQLGTGCDQAETLPKL 402

Query: 333 LNGP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
           L  P LE ++V  +SCG  HTAV+   G++F +G   +G LG GD I  + P EV  +K 
Sbjct: 403 LEAPNLENVNVKIISCGARHTAVIADEGKVFCWGWNKYGQLGLGDVIDRNAPSEV-RIKD 461

Query: 392 LRTVRAACGVWHTAAVVEVMVGSSS 416
                 ACG WHT     +++G SS
Sbjct: 462 CVPKNIACGWWHT-----LLLGQSS 481



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 121/257 (47%), Gaps = 40/257 (15%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLK------- 390
           G+ + SV+ G  HT  ++  GQ++ +G G  G LG G R+  VS+P  +  ++       
Sbjct: 227 GVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKA 286

Query: 391 -----------------GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDR 433
                            G    + ACG  H+A + +            +G L T+G G  
Sbjct: 287 TSSGVNMSSEVQCARVLGSYVKKIACGGRHSAVITD------------TGALLTFGWGLY 334

Query: 434 GRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA 493
           G+ G G  +  L PTCV++L+     +V+ G   T+  +  G VY+ G   +GQLG    
Sbjct: 335 GQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTICASADGDVYSFGGNQFGQLGTGCD 394

Query: 494 NGK-LPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 551
             + LP  +E    +N  V+ I+CG  H AV+    +V+ WG    G+LG GD  DRN P
Sbjct: 395 QAETLPKLLEAPNLENVNVKIISCGARHTAVIADEGKVFCWGWNKYGQLGLGDVIDRNAP 454

Query: 552 SLVEALKDKQVKSIVCG 568
           S V  +KD   K+I CG
Sbjct: 455 SEVR-IKDCVPKNIACG 470



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 135/311 (43%), Gaps = 57/311 (18%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
           S +P  V  A  + + ++A GGRH   ++  G+V+ WG    G+LG G     S  +L+ 
Sbjct: 216 SALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-----SRVRLVS 270

Query: 281 ALKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
           +   I  +E  + G+  +  V +S ++       C   L                    G
Sbjct: 271 SPHPIPCIEPSSYGKATSSGVNMSSEV------QCARVL--------------------G 304

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
            +V  ++CG  H+AV+T  G L TFG G +G  G G      +P  V SL G+R    A 
Sbjct: 305 SYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAA 364

Query: 400 GVWHTAAVVEVMVGSSSSSNCSS--GKLFTWGDGDRGRLGHGDKEARLVPTCVAA--LVE 455
           G+WHT               C+S  G ++++G    G+LG G  +A  +P  + A  L  
Sbjct: 365 GLWHTI--------------CASADGDVYSFGGNQFGQLGTGCDQAETLPKLLEAPNLEN 410

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA---NGKLPTRVEGKLTKNFVEE 512
            N   +SCG   T  +   G V+  G   YGQLG       N     R++  + KN    
Sbjct: 411 VNVKIISCGARHTAVIADEGKVFCWGWNKYGQLGLGDVIDRNAPSEVRIKDCVPKN---- 466

Query: 513 IACGDYHVAVL 523
           IACG +H  +L
Sbjct: 467 IACGWWHTLLL 477



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 42/229 (18%)

Query: 376 DRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRG 434
           D I +S  P  V    G+R V  A G  HT A+ ++            G+++ WG G  G
Sbjct: 211 DNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDI------------GQVWGWGYGGEG 258

Query: 435 RLGHGDKEARLVPT-----CV---------------------AALVEPNFCQVSCGHSLT 468
           +LG G +  RLV +     C+                     A ++     +++CG   +
Sbjct: 259 QLGLGSR-VRLVSSPHPIPCIEPSSYGKATSSGVNMSSEVQCARVLGSYVKKIACGGRHS 317

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
             +T TG + T G  +YGQ G    + +L       L    +EE+A G +H    ++  +
Sbjct: 318 AVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTICASADGD 377

Query: 529 VYTWGKGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFTAAI 575
           VY++G    G+LG G       P L+EA  L++  VK I CG   TA I
Sbjct: 378 VYSFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKIISCGARHTAVI 426


>gi|297810989|ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319215|gb|EFH49637.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 434

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 175/372 (47%), Gaps = 50/372 (13%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPKLIDALKNINVELVACG 293
           ++ +ACGG H   +T+   VF+ G    G+LG   V S    P  +  L   ++  ++ G
Sbjct: 84  IRAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDK-DILHISAG 142

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCGPWH 351
            +H+ A+T+ G++Y WG ++   G LG G + +  + +P K+   L GI + SV+ G  H
Sbjct: 143 YYHSAAITVDGELYMWGKNSS--GQLGLGKKAARVVRVPTKVE-ALHGITIQSVALGSEH 199

Query: 352 TAVVTSAGQLFTFG------------DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
           +  VT  G++ ++G               FG+L         TPR +  L+G++    A 
Sbjct: 200 SVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEF---TPRLIKELEGIKVKNVAA 256

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFC 459
           G+ H+A   E            +G  F +G+    ++G G       P+ ++ +  P   
Sbjct: 257 GLLHSACTDE------------NGSAFMFGERSINKMGFGGVRNATTPSIISEV--PYAE 302

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDY 518
            V+CG   T  +T  G +YT GS   G LG D       P RVEG   ++ V +++CG  
Sbjct: 303 GVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWK 362

Query: 519 HVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNFPSLVEALKDKQVKSIV 566
           H A + S  +V+TWG G +            G+LGHG   D   P++V+  K+ +   I 
Sbjct: 363 HTAAI-SDNKVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHIS 421

Query: 567 CGTSFTAAICLH 578
           CG + TAA+  H
Sbjct: 422 CGFNHTAAVLEH 433



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 105/200 (52%), Gaps = 17/200 (8%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F P+ ++    + V+N+A G  H+A   + G  F +GE    ++G G   + + P +I  
Sbjct: 238 FTPRLIKELEGIKVKNVAAGLLHSACTDENGSAFMFGERSINKMGFGGVRNATTPSIISE 297

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
           +     E VACG +HTC VT  G++YTWG SN N G LG  +      P ++ GP     
Sbjct: 298 VPY--AEGVACGGYHTCVVTRGGELYTWG-SNEN-GCLGTDSTYVSHSPVRVEGPFLEST 353

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFG----DGTFGV--------LGHGDRISVSTPREVDSL 389
           VS VSCG  HTA + S  ++FT+G     GTF V        LGHG  +  + P  VD  
Sbjct: 354 VSQVSCGWKHTAAI-SDNKVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLG 412

Query: 390 KGLRTVRAACGVWHTAAVVE 409
           K +R V  +CG  HTAAV+E
Sbjct: 413 KNVRAVHISCGFNHTAAVLE 432



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 8/160 (5%)

Query: 422 SGKLFT--WGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 479
           SGK F   WG GD GRLG G+ +++  P   +AL + +   V+CG + T+ LT T  V+ 
Sbjct: 46  SGKRFAAMWGSGDYGRLGLGNLDSQWTPAGCSALSDHSIRAVACGGAHTLFLTETRRVFA 105

Query: 480 MGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 537
            G    GQLG  D K++   P  V G L K+ +  I+ G YH A +T   E+Y WGK ++
Sbjct: 106 TGLNDCGQLGVSDVKSHAMDPLEVSG-LDKDIL-HISAGYYHSAAITVDGELYMWGKNSS 163

Query: 538 GRLGHGDTDDR--NFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G+LG G    R    P+ VEAL    ++S+  G+  + A+
Sbjct: 164 GQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAV 203



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 129/330 (39%), Gaps = 79/330 (23%)

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG  +  +G LG GN  S W P   +  L    + +V+CG  HT  +T   ++F  G   
Sbjct: 54  WGSGD--YGRLGLGNLDSQWTPAGCS-ALSDHSIRAVACGGAHTLFLTETRRVFATGLND 110

Query: 369 FGVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
            G LG  D  S +  P EV  L     +  + G +H+AA+               G+L+ 
Sbjct: 111 CGQLGVSDVKSHAMDPLEVSGLD-KDILHISAGYYHSAAIT------------VDGELYM 157

Query: 428 WGDGDRGRLGHGDKEARLV--PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG---- 481
           WG    G+LG G K AR+V  PT V AL       V+ G   +VA+T  G V + G    
Sbjct: 158 WGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGS 217

Query: 482 --------SPVYGQL-GDPKANGKLPTRVEGKLTKN------------------------ 508
                   S ++G L  + +   +L   +EG   KN                        
Sbjct: 218 GRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVKNVAAGLLHSACTDENGSAFMFGERS 277

Query: 509 ----------------------FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
                                 + E +ACG YH  V+T   E+YTWG   NG LG   T 
Sbjct: 278 INKMGFGGVRNATTPSIISEVPYAEGVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTY 337

Query: 547 DRNFPSLVEA-LKDKQVKSIVCGTSFTAAI 575
             + P  VE    +  V  + CG   TAAI
Sbjct: 338 VSHSPVRVEGPFLESTVSQVSCGWKHTAAI 367


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 209/469 (44%), Gaps = 57/469 (12%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD-VQNIACGGRHAALV 248
           G V+ WG+ T  G LG          G  +   +P  V+S   LD V  +A G +H+  +
Sbjct: 56  GTVWAWGDNT-YGQLG---------DGTGITQRLPVRVQS---LDSVVALAVGYQHSLAL 102

Query: 249 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 308
              G V++WG+   G+LG G D+    P  + +L    V  +A G+HH+ A+   G ++ 
Sbjct: 103 RSDGTVWAWGDNFFGQLGDGSDAQSQVPIQVWSLNG--VVAIAAGDHHSLALLSDGSVWA 160

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
           WG  N + G LG    ++  LP ++ G L G  V ++S G  H+  V S G++  +GD  
Sbjct: 161 WG-YNAH-GQLGDDTTVASPLPVQVQG-LSG--VVALSAGSTHSLAVLSDGKVKAWGDNY 215

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           +G LG G      TP  V SL G+++V A  G +H+ A+            CS G +  W
Sbjct: 216 YGQLGDGSSTERWTPVLVSSLTGVKSVVA--GTFHSLAL------------CSDGTVRAW 261

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G+   G+LG      R VP  V  L           HSL  AL + G V   G+  +GQ+
Sbjct: 262 GENGSGQLGISSTTRRPVPVVVPGLTNVQALAAGSAHSL--ALRSDGTVRAWGNNDHGQV 319

Query: 489 GDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G+   + +L P +V G      ++ IA G  H   + +    + WG  + G+LG G +  
Sbjct: 320 GNGTISQQLTPVQVPG---VGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQ 376

Query: 548 RNFPSLVEALKDKQVKSIVCGTSFTAAICLHK----WVSGVDQS--MCSGCRIPFNFKRK 601
           +  P+ V   + +    +  GT    ++ LH     W  GV+ +  +  G  +P     +
Sbjct: 377 QLRPARVLGQRIR----MPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLPRTLPVQ 432

Query: 602 RHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATET 650
                  GL   HT S+  S  +  A      +   DN FG+L   T T
Sbjct: 433 V-----PGLAGVHTLSATTS-HSLAARADGTVWAWGDNAFGQLGDGTTT 475



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 164/370 (44%), Gaps = 42/370 (11%)

Query: 190  GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
            G V+ WG   G G LG G        G++     P+ V+   +     ++ G  H+  V 
Sbjct: 756  GTVWAWGN-NGSGELGDGT-------GLQR----PRPVQVQGLGSAVAVSAGTNHSLAVQ 803

Query: 250  KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 309
              G V++WG    G+LG G       P  +  L    V  V+ G  H+ A+   G ++ W
Sbjct: 804  SDGTVWAWGGNSQGQLGDGTGITRYVPVRVSGLNG--VMAVSAGSAHSLALRSDGTVWAW 861

Query: 310  GGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            G    NF G LG        +P ++ G L G  V S++ G  H+  V S G ++ +G   
Sbjct: 862  G---YNFYGQLGDATSTQRLVPIQVPG-LTG--VVSIAAGTHHSLAVRSDGTVWAWGYNF 915

Query: 369  FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            +G LG G +I  S P +V  L G+ +V  A G +H+ AV             S+G ++ W
Sbjct: 916  YGQLGDGTKIQRSPPVQVPGLAGMVSV--AAGTYHSLAV------------HSNGTVWAW 961

Query: 429  GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
            G  + G+LG G    RL+P  +++         +  HSL V   T G V+  GS    QL
Sbjct: 962  GYNNHGQLGDGTTTQRLLPVPISS-SSGVIAAAANWHSLVV--RTDGTVWGWGSNNASQL 1018

Query: 489  GD-PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
            GD   ++ K+PT        N V  I+ G  H   L S   V+ WG G +G+LG G    
Sbjct: 1019 GDGSTSDRKMPTPSS---VPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSM 1075

Query: 548  RNFPSLVEAL 557
            R  P+ V   
Sbjct: 1076 RLVPAGVSGF 1085



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 155/341 (45%), Gaps = 28/341 (8%)

Query: 235  VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
            ++ +A GG H+  V   G V++WG    G LG G       P  +  L   +   V+ G 
Sbjct: 739  MKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQRPRPVQVQGLG--SAVAVSAGT 796

Query: 295  HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
            +H+ AV   G ++ WGG++   G LG G  ++ ++P +++G L G  V +VS G  H+  
Sbjct: 797  NHSLAVQSDGTVWAWGGNSQ--GQLGDGTGITRYVPVRVSG-LNG--VMAVSAGSAHSLA 851

Query: 355  VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
            + S G ++ +G   +G LG         P +V  L G+  V  A G  H+ AV       
Sbjct: 852  LRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGLTGV--VSIAAGTHHSLAV------- 902

Query: 415  SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                  S G ++ WG    G+LG G K  R  P  V  L       V+ G   ++A+ + 
Sbjct: 903  -----RSDGTVWAWGYNFYGQLGDGTKIQRSPPVQVPGLA--GMVSVAAGTYHSLAVHSN 955

Query: 475  GHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 534
            G V+  G   +GQLGD     +L   +   ++ +     A  ++H  V+ +   V+ WG 
Sbjct: 956  GTVWAWGYNNHGQLGDGTTTQRL---LPVPISSSSGVIAAAANWHSLVVRTDGTVWGWGS 1012

Query: 535  GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
                +LG G T DR  P+   +     V+SI  G + + A+
Sbjct: 1013 NNASQLGDGSTSDRKMPT--PSSVPNGVRSISSGANHSLAL 1051



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 110/233 (47%), Gaps = 22/233 (9%)

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
           V+ G  H+ ++ S G ++ +GD T+G LG G  I+   P  V SL     V  A G  H+
Sbjct: 42  VAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLD--SVVALAVGYQHS 99

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCG 464
            A+             S G ++ WGD   G+LG G      VP  V +L       ++ G
Sbjct: 100 LAL------------RSDGTVWAWGDNFFGQLGDGSDAQSQVPIQVWSL--NGVVAIAAG 145

Query: 465 HSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 523
              ++AL + G V+  G   +GQLG D      LP +V+G    + V  ++ G  H   +
Sbjct: 146 DHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQG---LSGVVALSAGSTHSLAV 202

Query: 524 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
            S  +V  WG    G+LG G + +R  P LV +L    VKS+V GT  + A+C
Sbjct: 203 LSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTG--VKSVVAGTFHSLALC 253



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 148/342 (43%), Gaps = 29/342 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V  ++    H+      G V++WG+   G+LG G  +    P  +  L    V+ V+   
Sbjct: 439 VHTLSATTSHSLAARADGTVWAWGDNAFGQLGDGTTTQRLLPVQVPGLAG--VDTVSSMH 496

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
            H+ AV+  G ++ WG +    G LG G  +S   P ++ G    + V++ S    H+  
Sbjct: 497 QHSLAVSRDGTVWAWGFNGS--GRLGDGTTLSRLTPVQVPGLSSMVAVAAGST---HSLA 551

Query: 355 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           + + G ++ +GD + G LG G  +   +P +V  L G+  + A  G  ++ AV       
Sbjct: 552 LRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPGLSGVVALAAGNG--YSLAV------- 602

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 474
                 + G ++ WG    G+LG G    R+ PT   AL       ++ G S ++AL   
Sbjct: 603 -----DAQGSVWAWGYNGMGQLGDGTTTPRVTPTQAPAL--SGVVALAAGDSHSLALRAD 655

Query: 475 GHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
           G  +  G    GQLGD     +  P  V G      V  +A G+ H  VL +     +WG
Sbjct: 656 GVAWAWGGNDQGQLGDATTLERSTPAAVPGLA---HVVALAAGNAHSLVLHADGTSSSWG 712

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
             A G+LG G +     P  V+      +K +  G S + A+
Sbjct: 713 NNAYGQLGDGTSTLHPVP--VQVPGPSAMKGVAAGGSHSLAV 752


>gi|397614675|gb|EJK62945.1| hypothetical protein THAOC_16425, partial [Thalassiosira oceanica]
          Length = 619

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 169/357 (47%), Gaps = 35/357 (9%)

Query: 216 GVKMDSFVPKAVESAV---VLDVQNIACGG----RHAALVTKQGEVFSWGEELGGRLGHG 268
           G + D   PK +  ++   V  VQ  A GG     H+ L+T  G V S+G    G LGHG
Sbjct: 157 GKREDEAEPKLMLGSIGWGVRIVQVAAGGGLVRVAHSLLLTSTGRVLSFGTAQYGALGHG 216

Query: 269 VD-----SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN 323
            D     SDV  PK I+AL+   V  VA GE H+ AVT  GD+YTWG   C  G LG G+
Sbjct: 217 YDQGKTLSDVLRPKYIEALRGEKVVCVAAGELHSGAVTEDGDVYTWGEGFC--GQLGLGD 274

Query: 324 EMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-------HG 375
                LP+++  G LE   V+++S G  HT V T  G++F++G G FGVLG       + 
Sbjct: 275 RRPHLLPEQVTRGGLEDECVANISMGCRHTLVATDDGEVFSWGLGRFGVLGRSYTDFTYN 334

Query: 376 DRISVSTPREVD-SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRG 434
           + I +  P   D  ++G+             AVV+         +     L      D  
Sbjct: 335 NDIGMVNPDGDDGQVQGVAAQAPEMQPQEMDAVVQAAAEDGVPFDALISSL------DAL 388

Query: 435 RLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN 494
            L   D   + +P  V AL       VS GH  ++ L   G +YT GS   G LG     
Sbjct: 389 NLTLDDPSTQCIPGRVDALEGIRAVGVSAGHRHSMVLDEHGGLYTFGSGAGGALGHGDLF 448

Query: 495 GK-LPTRVEGKLTKNFVE--EIACG-DYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 547
           G+  P RV     K+ VE  +++ G D  +AV T R  VY+WGK A+GR+G G  ++
Sbjct: 449 GQEFPVRVS-AFEKDAVEIHQMSAGVDVSMAVDT-RGNVYSWGKRADGRIGLGIIEE 503



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 141/363 (38%), Gaps = 60/363 (16%)

Query: 256 SWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE-------HHTCAVTLSGDMYT 308
           +WG    G+LG+G   D + PKL+       V +V            H+  +T +G + +
Sbjct: 145 AWGVGARGQLGNGKREDEAEPKLMLGSIGWGVRIVQVAAGGGLVRVAHSLLLTSTGRVLS 204

Query: 309 WGGSNCNFGLLGHGNE----MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           +G     +G LGHG +    +S  L  K    L G  V  V+ G  H+  VT  G ++T+
Sbjct: 205 FG--TAQYGALGHGYDQGKTLSDVLRPKYIEALRGEKVVCVAAGELHSGAVTEDGDVYTW 262

Query: 365 GDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 422
           G+G  G LG GDR     P +V    L+       + G  HT    +             
Sbjct: 263 GEGFCGQLGLGDRRPHLLPEQVTRGGLEDECVANISMGCRHTLVATD------------D 310

Query: 423 GKLFTWGDGDRGRLGH-----------------GDKEARLVPTCVAALVEPNFCQVSCGH 465
           G++F+WG G  G LG                  GD          A  ++P         
Sbjct: 311 GEVFSWGLGRFGVLGRSYTDFTYNNDIGMVNPDGDDGQVQGVAAQAPEMQPQEMDAVVQA 370

Query: 466 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 525
           +    +     + ++   +   L DP     +P RV+  L       ++ G  H  VL  
Sbjct: 371 AAEDGVPFDALISSL-DALNLTLDDPSTQ-CIPGRVD-ALEGIRAVGVSAGHRHSMVLDE 427

Query: 526 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVD 585
              +YT+G GA G LGHGD   + FP  V A +   V+             +H+  +GVD
Sbjct: 428 HGGLYTFGSGAGGALGHGDLFGQEFPVRVSAFEKDAVE-------------IHQMSAGVD 474

Query: 586 QSM 588
            SM
Sbjct: 475 VSM 477



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 98/220 (44%), Gaps = 26/220 (11%)

Query: 345 VSCGPWHTAV--------VTSAGQLFTFGDGTFGVLGHGDRISVSTPR-EVDSLK-GLRT 394
           VSC P HT +                 +G G  G LG+G R   + P+  + S+  G+R 
Sbjct: 119 VSCSPEHTLLRVGGGATSGPGGSGCAAWGVGARGQLGNGKREDEAEPKLMLGSIGWGVRI 178

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEAR-----LVPTC 449
           V+ A G      +V V   + S    S+G++ ++G    G LGHG  + +     L P  
Sbjct: 179 VQVAAG----GGLVRV---AHSLLLTSTGRVLSFGTAQYGALGHGYDQGKTLSDVLRPKY 231

Query: 450 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRV-EGKLT 506
           + AL       V+ G   + A+T  G VYT G    GQLG  D + +  LP +V  G L 
Sbjct: 232 IEALRGEKVVCVAAGELHSGAVTEDGDVYTWGEGFCGQLGLGDRRPH-LLPEQVTRGGLE 290

Query: 507 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 546
              V  I+ G  H  V T   EV++WG G  G LG   TD
Sbjct: 291 DECVANISMGCRHTLVATDDGEVFSWGLGRFGVLGRSYTD 330



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 16/130 (12%)

Query: 187 DSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           D  G ++ +G   G G LG G    G    V++ +F   AVE      +  ++ G   + 
Sbjct: 426 DEHGGLYTFGSGAG-GALGHG-DLFGQEFPVRVSAFEKDAVE------IHQMSAGVDVSM 477

Query: 247 LVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDA----LKNINVELVACGEHHTCAVT 301
            V  +G V+SWG+   GR+G G ++ +V  P+ +D      + ++VE   CG  H+  V 
Sbjct: 478 AVDTRGNVYSWGKRADGRIGLGIIEENVKVPRKVDVGDPLFRAVDVE---CGYVHSVIVG 534

Query: 302 LSGDMYTWGG 311
           L G ++  GG
Sbjct: 535 LCGSVFQCGG 544


>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 416

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 165/337 (48%), Gaps = 25/337 (7%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           ++CG  H A+VT   +++ +G    G+LG G  S VS P  + ALK   V+  ACG +HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G +Y  GG+  N G LG G+         ++       +  +S G   +A +T 
Sbjct: 100 LVSTEGGKVYAAGGN--NEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +GD + G +G  +  +V  P++V   K +  +  +CG +H+A V          
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT--------- 206

Query: 418 SNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 475
              + G+L+T+G+ + G+LG  ++      +P  V   +     QV+CG   TV LT   
Sbjct: 207 ---TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQVACGGGHTVVLTEKA 262

Query: 476 HVYTMGSPVYGQ--LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
            VYT G   +GQ  LG       +P  +E  +    +  IACG+ H A++T    +YT+G
Sbjct: 263 -VYTFGLGQFGQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLMYTFG 320

Query: 534 KGANGRLGHG--DTDDRNFPSLVEALKDKQVKSIVCG 568
            G +G+LG G  ++ ++  P+L        V+ + CG
Sbjct: 321 DGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 145/292 (49%), Gaps = 25/292 (8%)

Query: 289 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 348
            ++CG+ HT  VT +  +Y +G +N  +G LG G++ ++  P  +   L+   V   +CG
Sbjct: 39  FLSCGDEHTAVVTGNNKLYMFGSNN--WGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACG 95

Query: 349 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 408
             HT V T  G+++  G    G LG GD    ST   +      R ++            
Sbjct: 96  RNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIK------------ 143

Query: 409 EVMVGSSSSSNCSS-GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 467
           ++  GS++S+  +  G+LF WGD   G++G  +     VP  V   V      +SCG+  
Sbjct: 144 QLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWISCGYYH 201

Query: 468 TVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 524
           +  +TT G +YT G P  G+LG P     N ++P  V G   K  V ++ACG  H  VLT
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK--VVQVACGGGHTVVLT 259

Query: 525 SRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +  VYT+G G  G+LG G    + + P  +E +KD+++  I CG + TA I
Sbjct: 260 EKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 127/243 (52%), Gaps = 26/243 (10%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ ++ G   +A +T+ GE+F WG+   G++G    ++V  P+ +   K I+   ++CG 
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPIS--WISCGY 199

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI--HVSSVSCGPWHT 352
           +H+  VT  G +YT+G   C  G LG  N+  L +  ++  P+ GI   V  V+CG  HT
Sbjct: 200 YHSAFVTTEGQLYTFGEPEC--GKLGLPNQ--LLVNHRMPQPVPGIPGKVVQVACGGGHT 255

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
            V+T    ++TFG G FG LG G  +   S P+ ++ +K  +    ACG  HTA + ++ 
Sbjct: 256 VVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDM- 313

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEA--RLVPTCVAALVEPNFCQVSCG--HSL 467
                      G ++T+GDG  G+LG G + +  + +PT  +  +      VSCG  H+L
Sbjct: 314 -----------GLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTL 362

Query: 468 TVA 470
             A
Sbjct: 363 VFA 365



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 153/309 (49%), Gaps = 27/309 (8%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+  ACG  H  + T+ G+V++ G    G+LG G   + S   LI    
Sbjct: 78  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFT 137

Query: 284 NI-NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           +   ++ ++ G + + A+T  G+++ WG +  + G +G  N  ++ +P+++     G  +
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDN--SEGQIGLENVTNVCVPQQVT---VGKPI 192

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAACG 400
           S +SCG +H+A VT+ GQL+TFG+   G LG  +++ V+   P+ V  + G + V+ ACG
Sbjct: 193 SWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACG 251

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARL-VPTCVAALVEPNFC 459
             HT  + E  V             +T+G G  G+LG G       VP  +  + +    
Sbjct: 252 GGHTVVLTEKAV-------------YTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKIS 298

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACG 516
            ++CG + T  +T  G +YT G   +G+LG   +   N  +PT     L +  V+ ++CG
Sbjct: 299 FIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFL-RFIVQLVSCG 357

Query: 517 DYHVAVLTS 525
             H  V  +
Sbjct: 358 GCHTLVFAT 366



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 219 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--P 276
            ++ VPKA+E      +  IACG  H AL+T  G ++++G+   G+LG G+++  +   P
Sbjct: 281 FETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIP 340

Query: 277 KLIDALKNINVELVACGEHHT 297
            L        V+LV+CG  HT
Sbjct: 341 TLCSNFLRFIVQLVSCGGCHT 361


>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
           davidii]
          Length = 1369

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 161/348 (46%), Gaps = 47/348 (13%)

Query: 238 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 297
           +ACG  H A++T   +++ +G    G+LG G  S V  P  + ALK   V+ VACG +HT
Sbjct: 34  LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHT 93

Query: 298 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 357
              T  G +Y  GG+  N G LG G+         +           +S G   +A +T 
Sbjct: 94  LVSTEGGKVYAVGGN--NEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALTE 151

Query: 358 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 417
            G+LF +G+ + G +G  +  +V  P EV   K +  +  +CG +H+A V          
Sbjct: 152 DGKLFMWGENSEGQIGLNNVCNVYFPHEVTVGKPIAWI--SCGYYHSAFVT--------- 200

Query: 418 SNCSSGKLFTWGDGDRGRLG------HGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                G+L+T+G+ + G+LG         K  +LVP     ++     QV+CG   TV L
Sbjct: 201 ---MEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEKVI-----QVACGGGHTVVL 252

Query: 472 TTTGHVYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 522
           T    VY  G   +GQLG         +PK    + +  + K+T      I+CG+ H A+
Sbjct: 253 TEKA-VYNFGLGQFGQLGLGTFVFETTEPKI---MESVKDHKITY-----ISCGENHTAL 303

Query: 523 LTSRTEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 568
           +T    +YT+G G  G+LG G  +  N   P+L       +V  + CG
Sbjct: 304 ITDIGRMYTFGDGRYGKLGLGMENFTNQFVPTLCPNFLRFKVHLVACG 351



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 142/298 (47%), Gaps = 23/298 (7%)

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 341
            KN     +ACG+ HT  +T +  +Y +G ++  +G LG G++ ++  P  +   L+   
Sbjct: 26  FKNDIPTFLACGDEHTAVITGNKKLYMFGRND--WGQLGLGSKSAVCKPTCVKA-LKPEK 82

Query: 342 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 401
           V  V+CG  HT V T  G+++  G    G LG GD    +T   ++        +     
Sbjct: 83  VKHVACGRNHTLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAG 142

Query: 402 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQV 461
            +T+A +              GKLF WG+   G++G  +      P  V   V      +
Sbjct: 143 SNTSAAL-----------TEDGKLFMWGENSEGQIGLNNVCNVYFPHEVT--VGKPIAWI 189

Query: 462 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDY 518
           SCG+  +  +T  G +YT G P +G+LG PK    N K+P  V G   K  V ++ACG  
Sbjct: 190 SCGYYHSAFVTMEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEK--VIQVACGGG 247

Query: 519 HVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           H  VLT +  VY +G G  G+LG G    +   P ++E++KD ++  I CG + TA I
Sbjct: 248 HTVVLTEKA-VYNFGLGQFGQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALI 304



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 152/313 (48%), Gaps = 35/313 (11%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 283
           P  V++     V+++ACG  H  + T+ G+V++ G    G+LG G   D +   LI+   
Sbjct: 72  PTCVKALKPEKVKHVACGRNHTLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFT 131

Query: 284 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 342
           + +  + ++ G + + A+T  G ++ WG +  + G +G  N  +++ P ++     G  +
Sbjct: 132 SQHQFKQLSAGSNTSAALTEDGKLFMWGEN--SEGQIGLNNVCNVYFPHEVTV---GKPI 186

Query: 343 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGLRTVRAACG 400
           + +SCG +H+A VT  G+L+TFG+  FG LG   ++ ++   P+ V  +   + ++ ACG
Sbjct: 187 AWISCGYYHSAFVTMEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPE-KVIQVACG 245

Query: 401 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLV-PTCVAALVEPNFC 459
             HT  + E  V             + +G G  G+LG G        P  + ++ +    
Sbjct: 246 GGHTVVLTEKAV-------------YNFGLGQFGQLGLGTFVFETTEPKIMESVKDHKIT 292

Query: 460 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF----VEE 512
            +SCG + T  +T  G +YT G   YG+LG   +   N  +PT     L  NF    V  
Sbjct: 293 YISCGENHTALITDIGRMYTFGDGRYGKLGLGMENFTNQFVPT-----LCPNFLRFKVHL 347

Query: 513 IACGDYHVAVLTS 525
           +ACG  H+ V  +
Sbjct: 348 VACGGCHMVVFAT 360



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 7/92 (7%)

Query: 212 GSYAGVKMDSFV-----PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 266
           G +  + + +FV     PK +ES     +  I+CG  H AL+T  G ++++G+   G+LG
Sbjct: 263 GQFGQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALITDIGRMYTFGDGRYGKLG 322

Query: 267 HGVDSDVSH--PKLIDALKNINVELVACGEHH 296
            G+++  +   P L        V LVACG  H
Sbjct: 323 LGMENFTNQFVPTLCPNFLRFKVHLVACGGCH 354


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 135/284 (47%), Gaps = 19/284 (6%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           ++ ++A G   +  + + G +F WG  L G L    DS +  PKL+D + + +V  VACG
Sbjct: 82  EIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS-LHEPKLLDKIMHWSVVQVACG 140

Query: 294 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 353
             H  A+T  G + +WG SN   G LG G+    +L   +   L    +S +  G +H+ 
Sbjct: 141 AQHCIALTEEGTILSWG-SNTQ-GQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSG 198

Query: 354 VVTSAGQLFTFGDGTFGVLGHGDRISV-STPREVDSLKGLRTVRAACGVWHTAAVVEVMV 412
           V++ +G LFT+G   +G LGHG+  S  S+PR V +L+    V  A G  H         
Sbjct: 199 VLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEH--------- 249

Query: 413 GSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 472
              S     +G +F+WG G  G+LGH        P  +  L+    CQ+ CG   T++LT
Sbjct: 250 ---SVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLT 306

Query: 473 TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIAC 515
               +   G     QLG     + +LP  +   LT +   +++C
Sbjct: 307 DKRKLLGFGLNSNNQLGTHNDTSARLPITIPISLTDD--RQLSC 348



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 127/277 (45%), Gaps = 20/277 (7%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALV 248
           GD F         + G G   +G     K DS   PK ++  +   V  +ACG +H   +
Sbjct: 89  GDFFSIAIAESGLLFGWGRSLNGELM-CKQDSLHEPKLLDKIMHWSVVQVACGAQHCIAL 147

Query: 249 TKQGEVFSWGEELGGRLGHGV-DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 307
           T++G + SWG    G+LG G  + +   P +I +L    +  +  G +H+  ++ SG ++
Sbjct: 148 TEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLF 207

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
           TWG +N  +G LGHGN  S     +L   L    V  V+ G  H+   T  G +F++G G
Sbjct: 208 TWGKNN--WGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHG 265

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
             G LGH    +V+ P+++  L G    +  CG  HT ++ +              KL  
Sbjct: 266 GNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTD------------KRKLLG 313

Query: 428 WGDGDRGRLG-HGDKEARLVPTCVAALVEPNFCQVSC 463
           +G     +LG H D  ARL  T   +L +    Q+SC
Sbjct: 314 FGLNSNNQLGTHNDTSARLPITIPISLTDDR--QLSC 348



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 151/339 (44%), Gaps = 24/339 (7%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           V +IA G RH   +T   +V+S G    G+LG         P L+       +  VA G+
Sbjct: 33  VISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGFGAEEIFHVAAGD 90

Query: 295 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 354
             + A+  SG ++ WG S  N  L+   +  SL  PK L+  +    V  V+CG  H   
Sbjct: 91  FFSIAIAESGLLFGWGRS-LNGELMCKQD--SLHEPKLLDKIMHW-SVVQVACGAQHCIA 146

Query: 355 VTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 413
           +T  G + ++G  T G LG G   I    P  + SL      +   G +H+  +      
Sbjct: 147 LTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVL------ 200

Query: 414 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEA-RLVPTCVAALVEPNFCQVSCGHSLTVALT 472
                   SG LFTWG  + G+LGHG+ ++ +  P  V  L       V+ G   +V  T
Sbjct: 201 ------SPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254

Query: 473 TTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
             G V++ G    GQLG +  AN   P ++  +L    V +I CG  H   LT + ++  
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKIM-ELMGTTVCQICCGRRHTISLTDKRKLLG 313

Query: 532 WGKGANGRLG-HGDTDDRNFPSL-VEALKDKQVKSIVCG 568
           +G  +N +LG H DT  R   ++ +    D+Q+  I  G
Sbjct: 314 FGLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIAAG 352



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 147/325 (45%), Gaps = 23/325 (7%)

Query: 254 VFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           ++ WG+   G+LG G ++  +S P  IDA  N +V  +A G  HT  +T +  +Y+ G +
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPIDA--NQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
              FG LG   + S   P  + G      +  V+ G + +  +  +G LF +G    G L
Sbjct: 59  E--FGQLGQ--QKSQCRPSLVTG-FGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGEL 113

Query: 373 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 432
               + S+  P+ +D +     V+ ACG  H  A+ E             G + +WG   
Sbjct: 114 -MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTE------------EGTILSWGSNT 160

Query: 433 RGRLGHGDKEARLV-PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 491
           +G+LG G  E   + PT +A+L      Q+  G   +  L+ +G ++T G   +GQLG  
Sbjct: 161 QGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHG 220

Query: 492 KANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 550
            ++  +   R+   L    V  +A G+ H    T    V++WG G NG+LGH    +   
Sbjct: 221 NSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQ 280

Query: 551 PSLVEALKDKQVKSIVCGTSFTAAI 575
           P  +  L    V  I CG   T ++
Sbjct: 281 PKKIMELMGTTVCQICCGRRHTISL 305


>gi|55742244|ref|NP_001006906.1| NIMA-related kinase 8 [Xenopus (Silurana) tropicalis]
 gi|49670682|gb|AAH75274.1| NIMA (never in mitosis gene a)- related kinase 8 [Xenopus
           (Silurana) tropicalis]
          Length = 697

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 151/339 (44%), Gaps = 42/339 (12%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V++WG         G+ + +  P L     N  V  V+ G      VT SG +  W  + 
Sbjct: 321 VYTWGS--------GISTPLRLPML-----NTEVVQVSAGRTQKAGVTKSGRLIMWEATP 367

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEG---IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 370
              G       +    P+ ++  LEG   + +  VSCG   TA +T  G + TFG G+ G
Sbjct: 368 VGTGAPSLPGSIEHAQPQFISRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNG 427

Query: 371 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 430
            LGH +   V+ P+ V+ L G   V  +CG  H  AV          SN    ++F+WG 
Sbjct: 428 CLGHANFNDVTQPKIVEDLLGYEIVHVSCGASHAIAV----------SN--EKEVFSWGR 475

Query: 431 GDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG- 489
           GD GRLG G +E+   P  V    E    +V CG   ++ LT    +   GS  + +LG 
Sbjct: 476 GDNGRLGLGSQESYNSPQQVIIPPEYEAQRVVCGIDSSMILTVANQLLACGSNRFNKLGF 535

Query: 490 DPKANGKLPT---RVEGKLTKNFV-------EEIACGDY---HVAVLTSRTEVYTWGKGA 536
           D   +   P+   +VE   T   +       E I C D    H AV+T+  + YT+G   
Sbjct: 536 DRILSASEPSSEDQVEEAYTFTPIQSAPLNQEAILCADVGTSHSAVVTALGQCYTFGSNQ 595

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +G+LG     +   P LV AL+  +V  + CG ++T A+
Sbjct: 596 HGQLGTSAHRNSRVPCLVSALQGVKVTMVACGDAYTVAV 634



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 10/314 (3%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           F+ + +E    + +++++CG    A +T +G + ++G    G LGH   +DV+ PK+++ 
Sbjct: 386 FISRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHANFNDVTQPKIVED 445

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
           L    +  V+CG  H  AV+   ++++WG G N   G LG G++ S   P+++  P E  
Sbjct: 446 LLGYEIVHVSCGASHAIAVSNEKEVFSWGRGDN---GRLGLGSQESYNSPQQVIIPPE-Y 501

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR-AAC 399
               V CG   + ++T A QL   G   F  LG    +S S P   D ++   T      
Sbjct: 502 EAQRVVCGIDSSMILTVANQLLACGSNRFNKLGFDRILSASEPSSEDQVEEAYTFTPIQS 561

Query: 400 GVWHTAAVVEVMVGSSSSSNCSS-GKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF 458
              +  A++   VG+S S+  ++ G+ +T+G    G+LG        VP  V+AL     
Sbjct: 562 APLNQEAILCADVGTSHSAVVTALGQCYTFGSNQHGQLGTSAHRNSRVPCLVSALQGVKV 621

Query: 459 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF-VEEIAC-- 515
             V+CG + TVA+   G V+T G    G+LG       +P  V+ +   ++ V  +AC  
Sbjct: 622 TMVACGDAYTVAVGAEGQVFTWGKGARGRLGRRDEGIGIPKIVQLEENHSYVVTSVACCH 681

Query: 516 GDYHVAVLTSRTEV 529
           G+  +AV  S  ++
Sbjct: 682 GNTLLAVKPSLEDI 695



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 153/360 (42%), Gaps = 46/360 (12%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSW--------GEELGGRLGHGVDSDVSHPKLIDALKNI 285
           +V  ++ G    A VTK G +  W           L G + H     +S  + ++    +
Sbjct: 340 EVVQVSAGRTQKAGVTKSGRLIMWEATPVGTGAPSLPGSIEHAQPQFIS--RFLEGQSGV 397

Query: 286 NVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 344
            ++ V+CG+  T  +T  G + T+G GSN   G LGH N   +  PK +   L G  +  
Sbjct: 398 TIKHVSCGDLFTACLTDRGIIMTFGSGSN---GCLGHANFNDVTQPKIVED-LLGYEIVH 453

Query: 345 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 404
           VSCG  H   V++  ++F++G G  G LG G + S ++P++V         R  CG+   
Sbjct: 454 VSCGASHAIAVSNEKEVFSWGRGDNGRLGLGSQESYNSPQQVIIPPEYEAQRVVCGI--- 510

Query: 405 AAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG--------------DKEARLVPTCV 450
                     SS     + +L   G     +LG                ++     P   
Sbjct: 511 ---------DSSMILTVANQLLACGSNRFNKLGFDRILSASEPSSEDQVEEAYTFTPIQS 561

Query: 451 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNF 509
           A L +        G S +  +T  G  YT GS  +GQLG     N ++P  V   L    
Sbjct: 562 APLNQEAILCADVGTSHSAVVTALGQCYTFGSNQHGQLGTSAHRNSRVPCLVSA-LQGVK 620

Query: 510 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVC 567
           V  +ACGD +   + +  +V+TWGKGA GRLG  D +    P +V+  ++    V S+ C
Sbjct: 621 VTMVACGDAYTVAVGAEGQVFTWGKGARGRLGRRD-EGIGIPKIVQLEENHSYVVTSVAC 679



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 23/165 (13%)

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 484
           ++TWG G    L       RL       ++     QVS G +    +T +G +    +  
Sbjct: 321 VYTWGSGISTPL-------RL------PMLNTEVVQVSAGRTQKAGVTKSGRLIMWEATP 367

Query: 485 YGQLGDPKANGKLPTRVEGKLTKNFVE--------EIACGDYHVAVLTSRTEVYTWGKGA 536
            G  G P   G +    + +    F+E         ++CGD   A LT R  + T+G G+
Sbjct: 368 VGT-GAPSLPGSI-EHAQPQFISRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGS 425

Query: 537 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWV 581
           NG LGH + +D   P +VE L   ++  + CG S   A+   K V
Sbjct: 426 NGCLGHANFNDVTQPKIVEDLLGYEIVHVSCGASHAIAVSNEKEV 470



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 13/107 (12%)

Query: 188 SLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 247
           +LG  + +G     G LG   HR         +S VP  V +   + V  +ACG  +   
Sbjct: 584 ALGQCYTFGS-NQHGQLGTSAHR---------NSRVPCLVSALQGVKVTMVACGDAYTVA 633

Query: 248 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN--INVELVAC 292
           V  +G+VF+WG+   GRLG   D  +  PK++   +N    V  VAC
Sbjct: 634 VGAEGQVFTWGKGARGRLGRR-DEGIGIPKIVQLEENHSYVVTSVAC 679


>gi|196010051|ref|XP_002114890.1| hypothetical protein TRIADDRAFT_28793 [Trichoplax adhaerens]
 gi|190582273|gb|EDV22346.1| hypothetical protein TRIADDRAFT_28793 [Trichoplax adhaerens]
          Length = 697

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 148/334 (44%), Gaps = 37/334 (11%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDA-LKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           VF+WG            S  S P +++   +++ +  V         VT  G +  W  S
Sbjct: 320 VFTWG------------SSSSKPLMLNLPQRSLQITRVDVSRTQKMGVTNCGQIVIWEVS 367

Query: 313 NCNFGLL----GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 368
            C   ++     +   +++ +P+ L G    ++++ VSCG   TA +T  G L TFG G 
Sbjct: 368 RCTKKIVQLDGKNDRNINIDIPRLLEGQ-SVVNITHVSCGDLFTACLTDRGILMTFGSGA 426

Query: 369 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
            G LGHG+    + P+ V+SL G   V  +CG  H  A+             +  +LF W
Sbjct: 427 NGCLGHGNFNEAAHPKIVESLIGYEIVNVSCGASHIMAIT------------AEHELFAW 474

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 488
           G GD GRLG  + +   VP  +          V CG   ++ L   G +   GS    +L
Sbjct: 475 GRGDNGRLGTSNTKTYSVPELIKLPETYQPSSVCCGIDCSMVLCCDGCLLVCGSNRANKL 534

Query: 489 GDPKANGKLP------TRVEGK-LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 541
               ++  L       TRV    L+   +E++A G  H AV+T   ++YT G    G+LG
Sbjct: 535 SLDTSDTGLVDEKHSLTRVPSMPLSSLSIEQVAAGTSHTAVITEDGKLYTCGVNTYGQLG 594

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +  +  R     V +L  KQ+K I CG +FT A+
Sbjct: 595 YEQSKQRVSAKQVSSLNHKQIKYIACGDAFTIAV 628



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 143/319 (44%), Gaps = 36/319 (11%)

Query: 248 VTKQGEVFSWGE--------ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA 299
           VT  G++  W          +L G+    ++ D+  P+L++    +N+  V+CG+  T  
Sbjct: 355 VTNCGQIVIWEVSRCTKKIVQLDGKNDRNINIDI--PRLLEGQSVVNITHVSCGDLFTAC 412

Query: 300 VTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 358
           +T  G + T+G G+N   G LGHGN      PK +   L G  + +VSCG  H   +T+ 
Sbjct: 413 LTDRGILMTFGSGAN---GCLGHGNFNEAAHPKIVES-LIGYEIVNVSCGASHIMAITAE 468

Query: 359 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
            +LF +G G  G LG  +  + S P  +   +  +     CG+              S  
Sbjct: 469 HELFAWGRGDNGRLGTSNTKTYSVPELIKLPETYQPSSVCCGI------------DCSMV 516

Query: 419 NCSSGKLFTWGDGDRGRL-------GHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
            C  G L   G     +L       G  D++  L       L   +  QV+ G S T  +
Sbjct: 517 LCCDGCLLVCGSNRANKLSLDTSDTGLVDEKHSLTRVPSMPLSSLSIEQVAAGTSHTAVI 576

Query: 472 TTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 531
           T  G +YT G   YGQLG  ++  ++  +    L    ++ IACGD     +T+  EVY 
Sbjct: 577 TEDGKLYTCGVNTYGQLGYEQSKQRVSAKQVSSLNHKQIKYIACGDAFTIAVTADNEVYA 636

Query: 532 WGKGANGRLGHGDTDDRNF 550
           WGKG+ GRLG G   ++NF
Sbjct: 637 WGKGSRGRLGLG--TEKNF 653



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 153/348 (43%), Gaps = 49/348 (14%)

Query: 190 GDVFIW--GECTGDGI-LGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAA 246
           G + IW    CT   + L G   R+     + +D  +P+ +E   V+++ +++CG    A
Sbjct: 359 GQIVIWEVSRCTKKIVQLDGKNDRN-----INID--IPRLLEGQSVVNITHVSCGDLFTA 411

Query: 247 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 306
            +T +G + ++G    G LGHG  ++ +HPK++++L    +  V+CG  H  A+T   ++
Sbjct: 412 CLTDRGILMTFGSGANGCLGHGNFNEAAHPKIVESLIGYEIVNVSCGASHIMAITAEHEL 471

Query: 307 YTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 365
           + WG G N   G LG  N  +  +P+ +  P E    SSV CG   + V+   G L   G
Sbjct: 472 FAWGRGDN---GRLGTSNTKTYSVPELIKLP-ETYQPSSVCCGIDCSMVLCCDGCLLVCG 527

Query: 366 DGTFGVL-------GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 418
                 L       G  D     T      L  L   + A G  HTA + E         
Sbjct: 528 SNRANKLSLDTSDTGLVDEKHSLTRVPSMPLSSLSIEQVAAGTSHTAVITE--------- 578

Query: 419 NCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 478
               GKL+T G    G+LG+   + R+    V++L       ++CG + T+A+T    VY
Sbjct: 579 ---DGKLYTCGVNTYGQLGYEQSKQRVSAKQVSSLNHKQIKYIACGDAFTIAVTADNEVY 635

Query: 479 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE--EIACGDYHVAVLT 524
             G    G+LG       L T       KNFVE   I    Y+  +L+
Sbjct: 636 AWGKGSRGRLG-------LGTE------KNFVEPQRITFNHYNFEILS 670



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 13/159 (8%)

Query: 437 GHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 495
           G  D+   + +P  +      N   VSCG   T  LT  G + T GS   G LG    N 
Sbjct: 378 GKNDRNINIDIPRLLEGQSVVNITHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNFNE 437

Query: 496 KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
               ++   L    +  ++CG  H+  +T+  E++ WG+G NGRLG  +T   + P L++
Sbjct: 438 AAHPKIVESLIGYEIVNVSCGASHIMAITAEHELFAWGRGDNGRLGTSNTKTYSVPELIK 497

Query: 556 ALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRI 594
             +  Q  S+ CG   +  +C            C GC +
Sbjct: 498 LPETYQPSSVCCGIDCSMVLC------------CDGCLL 524



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 294
           ++ IACG      VT   EV++WG+   GRLG G + +   P+ I    + N E+++   
Sbjct: 615 IKYIACGDAFTIAVTADNEVYAWGKGSRGRLGLGTEKNFVEPQRI-TFNHYNFEILSLAS 673

Query: 295 HH 296
            H
Sbjct: 674 RH 675


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 169/365 (46%), Gaps = 47/365 (12%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 251
           V  WG    DG LG G       A V +D+  P         +V+++  G R++  +   
Sbjct: 7   VIAWGSGE-DGQLGLGTDEEKELASV-VDALEP--------FNVRSVVGGSRNSLAICDD 56

Query: 252 GEVFSWGEELGGRLGHGVDSDV-SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
           G++F+WG    G LGH  ++   S P L+ +L N+ +   A G  H  AV   G  Y WG
Sbjct: 57  GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWG 116

Query: 311 GSNCNFGLLGH-------GNEM--SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 361
           G+   +G  G        G  +   + +PK+     + + V  V+ G  H+ V+T  G +
Sbjct: 117 GNE--YGQCGEEPSKDETGRPVRRDIVIPKRC---AQQLTVRQVAAGGTHSVVLTREGYV 171

Query: 362 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 421
           +T+G         GD   +S P  V  L+ +R +  A G +H  A+ E            
Sbjct: 172 WTWGQ----PWPPGDIKQISVPVRVQGLENVRLI--AVGAFHNLALKE------------ 213

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 481
            G L+ WG+ + G+LG GD + R  P  V  L +     ++ G   + ALT  G VY  G
Sbjct: 214 DGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG 273

Query: 482 SPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANG 538
              +G+LG   + K++  LP +V   L    + +++CG  H   LT    ++++G+G +G
Sbjct: 274 RGEHGRLGFGDNDKSSKMLPQKVN-LLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHG 332

Query: 539 RLGHG 543
           RLG+G
Sbjct: 333 RLGYG 337



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 142/329 (43%), Gaps = 25/329 (7%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V +WG    G+LG G D +     ++DAL+  NV  V  G  ++ A+   G ++TWG + 
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 373
              G LGH  E        L   L  + +   + G WH   V   G+ + +G   +G  G
Sbjct: 67  --RGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCG 124

Query: 374 HGDRISVSTPREVDSLKGLR---TVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTWG 429
                    P + ++ + +R    +   C       V +V  G + S   +  G ++TWG
Sbjct: 125 -------EEPSKDETGRPVRRDIVIPKRCA--QQLTVRQVAAGGTHSVVLTREGYVWTWG 175

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
                    GD +   VP  V  L       V   H+L  AL   G ++  G+  YGQLG
Sbjct: 176 Q----PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNL--ALKEDGTLWAWGNNEYGQLG 229

Query: 490 DPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD-- 546
                 +  P  V+G      V+ IA G +H   LT+  EVY WG+G +GRLG GD D  
Sbjct: 230 TGDTQPRSYPIPVQGLDDLTLVD-IAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKS 288

Query: 547 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
            +  P  V  L  + +  + CG + + A+
Sbjct: 289 SKMLPQKVNLLPGEDIIQVSCGGTHSVAL 317



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 140/328 (42%), Gaps = 50/328 (15%)

Query: 224 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG---------VDSDVS 274
           P  V+S   + +   A G  H   V  QG  ++WG    G+ G           V  D+ 
Sbjct: 82  PSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIV 141

Query: 275 HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 334
            PK     + + V  VA G  H+  +T  G ++TWG           G+   + +P ++ 
Sbjct: 142 IPK--RCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQP------WPPGDIKQISVPVRVQ 193

Query: 335 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 394
           G LE + +  ++ G +H   +   G L+ +G+  +G LG GD    S P  V  L  L  
Sbjct: 194 G-LENVRL--IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTL 250

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGD--KEARLVPTCVAA 452
           V  A G WH+ A+             + G+++ WG G+ GRLG GD  K ++++P  V  
Sbjct: 251 VDIAAGGWHSTALT------------NEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNL 298

Query: 453 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD----------------PKANGK 496
           L   +  QVSCG + +VALT  G +++ G   +G+LG                 P   G+
Sbjct: 299 LPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGR 358

Query: 497 LPTRVEGKLTKNFVEEIACGDYHVAVLT 524
                E    K   + +ACG  H   + 
Sbjct: 359 FNHTDEEDDGKWIAKHVACGGRHTLAIV 386



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 25/227 (11%)

Query: 217 VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP 276
           V+ D  +PK    A  L V+ +A GG H+ ++T++G V++WG+        G    +S P
Sbjct: 136 VRRDIVIPK--RCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWP----PGDIKQISVP 189

Query: 277 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 336
             +  L+N  V L+A G  H  A+   G ++ WG  N  +G LG G+      P  + G 
Sbjct: 190 VRVQGLEN--VRLIAVGAFHNLALKEDGTLWAWG--NNEYGQLGTGDTQPRSYPIPVQG- 244

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD--RISVSTPREVDSLKGLRT 394
           L+ + +  ++ G WH+  +T+ G+++ +G G  G LG GD  + S   P++V+ L G   
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDI 304

Query: 395 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK 441
           ++ +CG  H+ A+               G++F++G GD GRLG+G K
Sbjct: 305 IQVSCGGTHSVALTR------------DGRIFSFGRGDHGRLGYGRK 339



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 21/194 (10%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 293
           +V+ IA G  H   + + G +++WG    G+LG G     S+P  +  L ++ +  +A G
Sbjct: 197 NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAG 256

Query: 294 EHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 352
             H+ A+T  G++Y WG G +   G  G  ++ S  LP+K+N  L G  +  VSCG  H+
Sbjct: 257 GWHSTALTNEGEVYGWGRGEHGRLG-FGDNDKSSKMLPQKVN-LLPGEDIIQVSCGGTHS 314

Query: 353 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV-----------------DSLKGLRTV 395
             +T  G++F+FG G  G LG+G +++   P E+                 D  K +   
Sbjct: 315 VALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAK- 373

Query: 396 RAACGVWHTAAVVE 409
             ACG  HT A+VE
Sbjct: 374 HVACGGRHTLAIVE 387



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 34/54 (62%)

Query: 523 LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 576
           + S T V  WG G +G+LG G  +++   S+V+AL+   V+S+V G+  + AIC
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAIC 54


>gi|449266005|gb|EMC77132.1| Serine/threonine-protein kinase Nek8 [Columba livia]
          Length = 692

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 150/355 (42%), Gaps = 50/355 (14%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW---- 309
           +++WG         G+ + +  P L     N  V  V+ G      VT SG +  W    
Sbjct: 321 IYTWGS--------GITTPLRLPML-----NTEVVQVSAGRTQKAGVTKSGRLIMWEAPP 367

Query: 310 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            G+     L G   ++      +      G+ +  VSCG   TA +T  G + TFG G+ 
Sbjct: 368 MGAAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSN 427

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 429
           G LGHG+   VS P+ V++L G   V+ ACG  H  AV          SN    ++F WG
Sbjct: 428 GCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAV----------SN--EREVFAWG 475

Query: 430 DGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 489
            GD GRLG G  E    P  V    E    +V CG   ++ LT    +   GS    +LG
Sbjct: 476 RGDNGRLGLGTLECHNSPQQVTVPPEHEAQRVICGIDSSMVLTVKNQILACGSNRCNKLG 535

Query: 490 DPKANGKLPTRVEGKLTK--NFV---------EEIACGDY---HVAVLTSRTEVYTWGKG 535
             + +       E ++ +   FV         E I C D    H A +T+  + YT+G  
Sbjct: 536 LDRISSAEEPSAEDQVEEATTFVCAQSSPLNQEPIVCADIGTAHSAAVTASGQCYTFGSN 595

Query: 536 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCS 590
            +G+LG     +   P LV  L+  +V  + CG +FT AI       G D  +C+
Sbjct: 596 QHGQLGTNSGRNSRVPHLVVGLQAMKVTVVACGDAFTVAI-------GADGEVCT 643



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 140/299 (46%), Gaps = 10/299 (3%)

Query: 222 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 281
           FV + +E    + +++++CG    A +T +G + ++G    G LGHG  +DVS PK+++A
Sbjct: 387 FVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEA 446

Query: 282 LKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 340
           L    +  VACG  H  AV+   +++ WG G N   G LG G       P+++  P E  
Sbjct: 447 LLGYEMVQVACGASHVLAVSNEREVFAWGRGDN---GRLGLGTLECHNSPQQVTVPPEH- 502

Query: 341 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRT-VRAA 398
               V CG   + V+T   Q+   G      LG  DRI S   P   D ++   T V A 
Sbjct: 503 EAQRVICGIDSSMVLTVKNQILACGSNRCNKLGL-DRISSAEEPSAEDQVEEATTFVCAQ 561

Query: 399 CGVWHTAAVVEVMVGSS-SSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPN 457
               +   +V   +G++ S++  +SG+ +T+G    G+LG        VP  V  L    
Sbjct: 562 SSPLNQEPIVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSGRNSRVPHLVVGLQAMK 621

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF-VEEIAC 515
              V+CG + TVA+   G V T G    G+LG        P  V+ + T  + V  +AC
Sbjct: 622 VTVVACGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGTPRPVQLEETHPYLVTSVAC 680



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 155/349 (44%), Gaps = 23/349 (6%)

Query: 234 DVQNIACGGRHAALVTKQGEVFSW---------GEELGGRLGHGVDSDVSHPKLIDALKN 284
           +V  ++ G    A VTK G +  W         G  L G         VS  + ++    
Sbjct: 340 EVVQVSAGRTQKAGVTKSGRLIMWEAPPMGAAGGPSLPGATEQLQPQFVS--RFLEGQSG 397

Query: 285 INVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
           + ++ V+CG+  T  +T  G + T+G GSN   G LGHGN   +  PK +   L G  + 
Sbjct: 398 VTIKHVSCGDLFTACLTDRGIIMTFGSGSN---GCLGHGNFTDVSQPKIVEA-LLGYEMV 453

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            V+CG  H   V++  ++F +G G  G LG G     ++P++V         R  CG+  
Sbjct: 454 QVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVTVPPEHEAQRVICGIDS 513

Query: 404 TAAV-VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALV--EPNFCQ 460
           +  + V+  + +  S+ C+   L      +        +EA       ++ +  EP  C 
Sbjct: 514 SMVLTVKNQILACGSNRCNKLGLDRISSAEEPSAEDQVEEATTFVCAQSSPLNQEPIVC- 572

Query: 461 VSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH 519
              G + + A+T +G  YT GS  +GQLG +   N ++P  V G L    V  +ACGD  
Sbjct: 573 ADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSGRNSRVPHLVVG-LQAMKVTVVACGDAF 631

Query: 520 VAVLTSRTEVYTWGKGANGRLGHGDTDDRN-FPSLVEALKDKQVKSIVC 567
              + +  EV TWGKGA GRLG  D +     P  +E      V S+ C
Sbjct: 632 TVAIGADGEVCTWGKGARGRLGRKDEETGTPRPVQLEETHPYLVTSVAC 680


>gi|110740523|dbj|BAE98367.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 488

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 108/193 (55%), Gaps = 10/193 (5%)

Query: 215 AGVKMDSFVPKAVESAVVLD--VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 272
           +GV M S V    +   VL   V+ IACGGRH+A++T  G + ++G  L G+ G G   D
Sbjct: 295 SGVNMSSVV----QCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDD 350

Query: 273 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 332
              P  + +L  I +E VA G  HT   +  GD+Y +GG+   FG LG G + +  LPK 
Sbjct: 351 ELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGN--QFGQLGTGCDQAETLPKL 408

Query: 333 LNGP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 391
           L  P LE ++V ++SCG  HTAV+T  G++F +G   +G LG GD I  + P EV  +K 
Sbjct: 409 LEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEV-RIKD 467

Query: 392 LRTVRAACGVWHT 404
                 ACG WHT
Sbjct: 468 CFPKNIACGWWHT 480



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 122/245 (49%), Gaps = 16/245 (6%)

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRA 397
           G+ + SV+ G  HT  ++  GQ++ +G G  G LG G R+  VS+P  +  ++     +A
Sbjct: 233 GVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKA 292

Query: 398 A-----------CGVWHTAAVVEVMVGSSSSSNCS-SGKLFTWGDGDRGRLGHGDKEARL 445
                       CG    + V ++  G   S+  + +G L T+G G  G+ G G  +  L
Sbjct: 293 TSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDEL 352

Query: 446 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGK 504
            PTCV++L+     +V+ G   T   ++ G VY  G   +GQLG      + LP  +E  
Sbjct: 353 SPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAP 412

Query: 505 LTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 563
             +N  V+ I+CG  H AV+T    V+ WG    G+LG GD  DRN P+ V  +KD   K
Sbjct: 413 NLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPK 471

Query: 564 SIVCG 568
           +I CG
Sbjct: 472 NIACG 476



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 133/311 (42%), Gaps = 49/311 (15%)

Query: 221 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 280
           S +P  V  A  + + ++A GGRH   ++  G+V+ WG    G+LG G     S  +L+ 
Sbjct: 222 SALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-----SRVRLVS 276

Query: 281 ALKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 339
           +   I  +E  + G+  +  V +S  +                            G + G
Sbjct: 277 SPHPIPCIEPSSYGKATSSGVNMSSVVQC--------------------------GRVLG 310

Query: 340 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 399
            +V  ++CG  H+AV+T  G L TFG G +G  G G      +P  V SL G+R    A 
Sbjct: 311 SYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAA 370

Query: 400 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAA--LVEPN 457
           G+WHT                S G ++ +G    G+LG G  +A  +P  + A  L   N
Sbjct: 371 GLWHTTCA------------SSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVN 418

Query: 458 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACG 516
              +SCG   T  +T  G V+  G   YGQLG     +   P  V  ++   F + IACG
Sbjct: 419 VKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEV--RIKDCFPKNIACG 476

Query: 517 DYHVAVLTSRT 527
            +H  +L   T
Sbjct: 477 WWHTLLLGQPT 487



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 42/229 (18%)

Query: 376 DRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRG 434
           D I +S  P  V    G+R V  A G  HT A+ ++            G+++ WG G  G
Sbjct: 217 DNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDI------------GQVWGWGYGGEG 264

Query: 435 RLGHGDKEARLV--PTCVAALVEPNF---------------C---------QVSCGHSLT 468
           +LG G +  RLV  P  +  +   ++               C         +++CG   +
Sbjct: 265 QLGLGSR-VRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHS 323

Query: 469 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 528
             +T TG + T G  +YGQ G    + +L       L    +EE+A G +H    +S  +
Sbjct: 324 AVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGD 383

Query: 529 VYTWGKGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFTAAI 575
           VY +G    G+LG G       P L+EA  L++  VK+I CG   TA I
Sbjct: 384 VYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVI 432


>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
          Length = 627

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 135/282 (47%), Gaps = 29/282 (10%)

Query: 254 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 313
           V++WG     +L  G    +  PKL+       V+ +  G++  C   +  D        
Sbjct: 360 VYAWGSNSSHQLAEGTSEKILQPKLVTNFPK--VQQLEAGQY--CTFVIDNDGAVSACGK 415

Query: 314 CNFGLLGHGNEMSLWLPKKLNGPLEGIH----VSSVSCGPWHTAVVTSAGQLFTFGDGTF 369
            ++G LG G+  +   PKKL+   +  H    +SS      HT  +T  G LF++GDG +
Sbjct: 416 GSYGRLGLGDSSNQTAPKKLS--FDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDY 473

Query: 370 GVLGHGDRISVSTPREVDSLKGLRTVRAAC-GVWHTAAVVEVMVGSSSSSNCSSGKLFTW 428
           G LGHG+  +   P+ +      + V+  C G  H+AAV E             G+L+TW
Sbjct: 474 GKLGHGNISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTE------------DGQLYTW 521

Query: 429 GDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGSPVYGQ 487
           G+GD GRLGHGD   R VPT V  +   N  QV+CG S T+A++  G  V+T G    G+
Sbjct: 522 GEGDFGRLGHGDNSGRNVPTLVKDI--SNVGQVACGSSHTIAVSQDGRTVWTFGG---GK 576

Query: 488 LGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 529
           LG   AN     +V       ++ ++ACG +    LTS  +V
Sbjct: 577 LGFEDANRVYRPKVVDAFAGLYIRKVACGSHSSLALTSSGQV 618



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 121/246 (49%), Gaps = 21/246 (8%)

Query: 235 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG- 293
           VQ +  G     ++   G V + G+   GRLG G  S+ + PK +       V+ ++   
Sbjct: 391 VQQLEAGQYCTFVIDNDGAVSACGKGSYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSK 450

Query: 294 --EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 351
             + HT A+T+ G +++WG  + ++G LGHGN  +   PK + GPL G  V  +  G  H
Sbjct: 451 GSDGHTLALTVEGALFSWG--DGDYGKLGHGNISTQKYPKLIQGPLAGKVVKCICAGYRH 508

Query: 352 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 411
           +A VT  GQL+T+G+G FG LGHGD    + P  V  +  +  V  ACG  HT AV +  
Sbjct: 509 SAAVTEDGQLYTWGEGDFGRLGHGDNSGRNVPTLVKDISNVGQV--ACGSSHTIAVSQ-- 564

Query: 412 VGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 471
                        ++T+G    G+LG  D      P  V A       +V+CG   ++AL
Sbjct: 565 ---------DGRTVWTFGG---GKLGFEDANRVYRPKVVDAFAGLYIRKVACGSHSSLAL 612

Query: 472 TTTGHV 477
           T++G V
Sbjct: 613 TSSGQV 618



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 134/277 (48%), Gaps = 31/277 (11%)

Query: 306 MYTWGGSNCNFGLLGHGNEMSLWLPKKL-NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
           +Y WG ++ +   L  G    +  PK + N P     V  +  G + T V+ + G +   
Sbjct: 360 VYAWGSNSSH--QLAEGTSEKILQPKLVTNFP----KVQQLEAGQYCTFVIDNDGAVSAC 413

Query: 365 GDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVGSSSSSNCS 421
           G G++G LG GD  + + P+++  D+   ++ + ++ G   HT A+              
Sbjct: 414 GKGSYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALT------------V 461

Query: 422 SGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSC-GHSLTVALTTTGHVYTM 480
            G LF+WGDGD G+LGHG+   +  P  +   +     +  C G+  + A+T  G +YT 
Sbjct: 462 EGALFSWGDGDYGKLGHGNISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTEDGQLYTW 521

Query: 481 GSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANG 538
           G   +G+LG    +G+ +PT V  K   N V ++ACG  H +AV      V+T+G    G
Sbjct: 522 GEGDFGRLGHGDNSGRNVPTLV--KDISN-VGQVACGSSHTIAVSQDGRTVWTFG---GG 575

Query: 539 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           +LG  D +    P +V+A     ++ + CG+  + A+
Sbjct: 576 KLGFEDANRVYRPKVVDAFAGLYIRKVACGSHSSLAL 612


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 192/398 (48%), Gaps = 48/398 (12%)

Query: 192 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVV----LDVQNIACGGRHAAL 247
           ++++G C GDG LG    R  S         VP+ V  A      + V++IA G RH   
Sbjct: 6   LYVFG-CAGDGQLG---FRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLF 61

Query: 248 VTKQGEVFSWGEELGGRLGHG---VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 304
           ++  G+V+S G    G LG G     S   +P  I +   +++  ++ G  H+ AV+  G
Sbjct: 62  LSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISS--TVSIIQISAGRSHSMAVSDDG 119

Query: 305 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 364
            ++ W GSN +  L   G+ ++   PK++    E +    V+CG  HT  +   G++F +
Sbjct: 120 RLFAW-GSNSHGQLAMSGDILASDTPKRVPSLPETVQ---VACGASHTVSLNGGGRVFIW 175

Query: 365 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 424
           G  + G + H       +P EV+    +  V+ + G   T A+             +SG 
Sbjct: 176 GQQSDGRIRH-------SPAEVEIFISIPIVQISAGNLFTMALT------------ASGT 216

Query: 425 LFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNF---CQVSCGHSLTVALTTTGHVYTMG 481
           LF WG  + G+LG    +  + P  V     PN      V CG S ++ALT  G V++ G
Sbjct: 217 LFAWGKNEEGQLGDFTNKDVVNPCAV-----PNINSVVAVECGDSHSIALTHEGRVFSCG 271

Query: 482 SPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 540
           S  +GQLG  + N  +   R   ++  + V  IACG  H  ++ +  +++T+G  +NG+L
Sbjct: 272 SDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQL 330

Query: 541 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 578
           GHG+T ++  P +++++++  V S+  G   +  + +H
Sbjct: 331 GHGNTRNQITPRVIDSVEN--VASVFAGWDQSFCLQIH 366



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 116/239 (48%), Gaps = 41/239 (17%)

Query: 190 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 249
           G VFIWG+ +      G I  S            P  VE  + + +  I+ G      +T
Sbjct: 170 GRVFIWGQQSD-----GRIRHS------------PAEVEIFISIPIVQISAGNLFTMALT 212

Query: 250 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYT 308
             G +F+WG+   G+LG   + DV +P    A+ NIN V  V CG+ H+ A+T  G +++
Sbjct: 213 ASGTLFAWGKNEEGQLGDFTNKDVVNPC---AVPNINSVVAVECGDSHSIALTHEGRVFS 269

Query: 309 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI------HVSSVSCGPWHTAVVTSAGQLF 362
            G  +  FG LG G       P +    + GI      HV+ ++CG  HT VV + G++ 
Sbjct: 270 CGSDS--FGQLGCGQ------PNRSQNCMRGITEMLGSHVTRIACGRCHTIVVAN-GKMH 320

Query: 363 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA-----CGVWHTAAVVEVMVGSSS 416
           TFG  + G LGHG+  +  TPR +DS++ + +V A      C   HT    +V+ G SS
Sbjct: 321 TFGLNSNGQLGHGNTRNQITPRVIDSVENVASVFAGWDQSFCLQIHTKHAYDVLSGPSS 379



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 155/362 (42%), Gaps = 54/362 (14%)

Query: 139 ACGSVNSLSSGGSDGRTGHLKGLSGDTFRVSLSSAVSSSSQGSGHDDGDSLGD---VFIW 195
           +CGS    +  G  GR G  +G S   + V +SS VS     +G     ++ D   +F W
Sbjct: 70  SCGS----NYNGELGRGGVREG-SYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFAW 124

Query: 196 GECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF 255
           G  +         H   + +G  + S  PK V S  + +   +ACG  H   +   G VF
Sbjct: 125 GSNS---------HGQLAMSGDILASDTPKRVPS--LPETVQVACGASHTVSLNGGGRVF 173

Query: 256 SWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 315
            WG++  GR+ H        P  ++   +I +  ++ G   T A+T SG ++ WG +   
Sbjct: 174 IWGQQSDGRIRHS-------PAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEE- 225

Query: 316 FGLLGHGNEMSLWLPKKLNGPLEGIHVSS---VSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
            G LG       +  K +  P    +++S   V CG  H+  +T  G++F+ G  +FG L
Sbjct: 226 -GQLGD------FTNKDVVNPCAVPNINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQL 278

Query: 373 GHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           G G    S +  R +  + G    R ACG  HT  V             ++GK+ T+G  
Sbjct: 279 GCGQPNRSQNCMRGITEMLGSHVTRIACGRCHTIVV-------------ANGKMHTFGLN 325

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT-TGHVYTMGSPVYGQLGD 490
             G+LGHG+   ++ P  + ++   N   V  G   +  L   T H Y + S     L  
Sbjct: 326 SNGQLGHGNTRNQITPRVIDSV--ENVASVFAGWDQSFCLQIHTKHAYDVLSGPSSYLQK 383

Query: 491 PK 492
           PK
Sbjct: 384 PK 385


>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
          Length = 870

 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 15/227 (6%)

Query: 225 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALK 283
           + ++S   + +  +ACG  H+  ++K  EVF WG+   G+LG G+D    + P+LI +L 
Sbjct: 3   RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 62

Query: 284 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 343
            I    VA G  H+  +TLSG ++ WG +   FG LG  +E   ++P  L   L    + 
Sbjct: 63  GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK--FGQLGLNDENDRYVPNLLKS-LRSQKIV 119

Query: 344 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 403
            + CG  HTA +T  G +FTFG G +G LGH        PR+V  L G    + ACG  H
Sbjct: 120 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQH 179

Query: 404 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCV 450
           T+A V            SSG+++++G G  G+LG G    R  P  V
Sbjct: 180 TSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 215



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 111/221 (50%), Gaps = 14/221 (6%)

Query: 337 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTV 395
           L  I +  V+CG +H+  ++ A ++F +G   +G LG G D    ++P+ + SL G+  +
Sbjct: 8   LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFM 67

Query: 396 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE 455
           + A G            G+ S     SG +F WG    G+LG  D+  R VP  + +L  
Sbjct: 68  QVAAG------------GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS 115

Query: 456 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 515
                + CG   T ALT  G V+T G+  YGQLG    + ++  R   +L  + V +IAC
Sbjct: 116 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIAC 175

Query: 516 GDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 555
           G  H  A + S   +Y++G G NG+LG G T +R  P  V+
Sbjct: 176 GRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 216



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 13/197 (6%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 250
           +VF WG+    G LG GI      +        P+ ++S + +    +A GG H+ ++T 
Sbjct: 31  EVFCWGQ-NKYGQLGLGIDCKKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 81

Query: 251 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 310
            G +F WG    G+LG   ++D   P L+ +L++  +  + CGE HT A+T  G ++T+G
Sbjct: 82  SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 141

Query: 311 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTF 369
                +G LGH +      P+K+   L G  V+ ++CG  HT A V S+G++++FG G  
Sbjct: 142 AG--GYGQLGHNSTSHEINPRKV-FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 198

Query: 370 GVLGHGDRISVSTPREV 386
           G LG G   +  +P  V
Sbjct: 199 GQLGTGSTSNRKSPFTV 215



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 13/194 (6%)

Query: 384 REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHG-DKE 442
           R + SL  ++ V+ ACG +H+ A+              + ++F WG    G+LG G D +
Sbjct: 3   RNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCWGQNKYGQLGLGIDCK 50

Query: 443 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVE 502
            +  P  + +L+   F QV+ G + +  LT +G ++  G   +GQLG    N +    + 
Sbjct: 51  KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 110

Query: 503 GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQV 562
             L    +  I CG+ H A LT    V+T+G G  G+LGH  T     P  V  L    V
Sbjct: 111 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 170

Query: 563 KSIVCGTSFTAAIC 576
             I CG   T+A  
Sbjct: 171 TQIACGRQHTSAFV 184


>gi|403340993|gb|EJY69790.1| hypothetical protein OXYTRI_09469 [Oxytricha trifallax]
          Length = 1074

 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 181/402 (45%), Gaps = 46/402 (11%)

Query: 191 DVFIWGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVT 249
           +VF+WG+     +  G  H+           F VPK     ++  ++ I+CG  H+A++T
Sbjct: 77  EVFVWGDDRWGQL--GLYHQKLKKGNCDQVFFKVPKTCSFNIL--IKQISCGDNHSAILT 132

Query: 250 KQGEVFSWGEELGGRLGHGVDS-DVSH------PKLIDALKNINVELVACGEHHTCAVTL 302
            QG ++  G    G+LG G +  D+ +      P L+D L++  VE V CG + T ++  
Sbjct: 133 NQGHLYMMGSNSQGQLGIGDNCPDLQNKDCAGAPCLVDKLRDYKVESVECGSNFTFSIVK 192

Query: 303 SGD-----MYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLE-GIHVSSVSCGPWHTAVV 355
             +     ++ WG   CN  G LG  +   +  P KL    +  I +  +S G  H+  +
Sbjct: 193 DSNNQEQSIFAWG---CNREGQLGLSSLAEIDFPTKLKFFEDYNIRIKQISAGSSHSLFL 249

Query: 356 TSAGQLFTFGDGTFGVLGHGDRISVST-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 414
           T   Q++  G  + G LG G +I+ +  P  +D+L     ++ + G  H+  +       
Sbjct: 250 TEESQVYAVGSNSSGQLGIGQQINQAIQPIIIDTLVDKVIIQISAGDHHSLFLT------ 303

Query: 415 SSSSNCSSGKLFTWGDGDRGRLGHGDKEA-RLVPTCVAALVEPNFCQVSCGHSLTVALTT 473
                 S+G+++  G+    +LG  D +  +  P  + AL      ++      + A++ 
Sbjct: 304 ------STGEVYCCGNNQLNQLGIMDAQTNQYTPLKITALQNYKIVKIEAKQE-SAAISN 356

Query: 474 TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
            G ++  G  V+G    P+   K+ T        N V +I+ G      L S+  ++TWG
Sbjct: 357 AGELFLWGKGVFGSYRTPQ---KILT------ISNPVCDISLGRSLGTALDSKGLLWTWG 407

Query: 534 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
              +G LG GD D R  P  V  LK K+V  I+CG  F  A+
Sbjct: 408 TNEHGELGVGDQDPRIHPYPVLTLKGKKVTQIMCGGKFVVAL 449


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 128/268 (47%), Gaps = 21/268 (7%)

Query: 220 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 279
           D FVP+ V+     DV N+A G  H A VT  GE++  G     +LG    SD   P  +
Sbjct: 20  DVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNEESQLGVRQRSDALAPTRV 79

Query: 280 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLE 338
            AL+   V+ VACG  HT AV   G +  +G  +  +G +G G     + LP+ +   L 
Sbjct: 80  TALEQFQVQRVACGPAHTLAVVDGGAVAAFG--SAEYGQVGLGPCGARVELPRVVK-DLR 136

Query: 339 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 398
            +H+  V+ G  HT  ++S G +F+ G+G+FG LG G       PR +  L  L  V+ A
Sbjct: 137 SMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGNDVPRPISRLWPLGVVQIA 196

Query: 399 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRL-----GHGDKEARLVPTCVAAL 453
           CG  H+AA+             + G++ TWG G    L     GHGD E    P  V AL
Sbjct: 197 CGENHSAAIT------------ADGRVLTWGRGKHRLLPAFHCGHGDFENCSTPKPVQAL 244

Query: 454 VEPNFCQVSCGHSLTVALTTTGHVYTMG 481
                 QVSCG   TV LT  G VY  G
Sbjct: 245 KGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 133/289 (46%), Gaps = 25/289 (8%)

Query: 253 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 312
           EV+ +G    G+LG G   DV  P+L+  LK+ +V  +A G  HT AVT  G++Y  G +
Sbjct: 1   EVWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 313 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 372
             +   LG         P ++   LE   V  V+CGP HT  V   G +  FG   +G +
Sbjct: 61  EES--QLGVRQRSDALAPTRVT-ALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQV 117

Query: 373 GHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 431
           G G     V  PR V  L+ +  VR A G  HT A+             S+G +F+ G+G
Sbjct: 118 GLGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLAL------------SSTGGVFSCGNG 165

Query: 432 DRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL--- 488
             G LG G  E   VP  ++ L      Q++CG + + A+T  G V T G   +  L   
Sbjct: 166 SFGALGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAF 225

Query: 489 ----GDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 533
               GD + N   P  V+  L      +++CGD H  +LT    VY WG
Sbjct: 226 HCGHGDFE-NCSTPKPVQ-ALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 134/274 (48%), Gaps = 19/274 (6%)

Query: 308 TWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 367
            W     + G LG G+   +++P+ + G L+   V +++ G  HTA VTS G+L+  G  
Sbjct: 2   VWVFGRGDMGQLGDGSTEDVFVPRLVKG-LKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 368 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 427
               LG   R     P  V +L+  +  R ACG  HT AVV+             G +  
Sbjct: 61  EESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVD------------GGAVAA 108

Query: 428 WGDGDRGRLGHGDKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 486
           +G  + G++G G   AR+ +P  V  L   +  +V+ G S T+AL++TG V++ G+  +G
Sbjct: 109 FGSAEYGQVGLGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFG 168

Query: 487 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL-----G 541
            LG     G    R   +L    V +IACG+ H A +T+   V TWG+G +  L     G
Sbjct: 169 ALGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCG 228

Query: 542 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 575
           HGD ++ + P  V+ALK    + + CG   T  +
Sbjct: 229 HGDFENCSTPKPVQALKGIVGRQVSCGDDHTVLL 262



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 3/154 (1%)

Query: 424 KLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 483
           +++ +G GD G+LG G  E   VP  V  L   +   ++ G   T A+T+ G +Y MGS 
Sbjct: 1   EVWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 484 VYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 542
              QLG   +++   PTRV   L +  V+ +ACG  H   +     V  +G    G++G 
Sbjct: 61  EESQLGVRQRSDALAPTRVT-ALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119

Query: 543 GDTDDR-NFPSLVEALKDKQVKSIVCGTSFTAAI 575
           G    R   P +V+ L+   +  +  G S T A+
Sbjct: 120 GPCGARVELPRVVKDLRSMHIVRVAAGGSHTLAL 153


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.314    0.129    0.386 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,534,942,054
Number of Sequences: 23463169
Number of extensions: 726803302
Number of successful extensions: 1961010
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5124
Number of HSP's successfully gapped in prelim test: 4352
Number of HSP's that attempted gapping in prelim test: 1832749
Number of HSP's gapped (non-prelim): 43562
length of query: 1020
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 867
effective length of database: 8,769,330,510
effective search space: 7603009552170
effective search space used: 7603009552170
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 82 (36.2 bits)