BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001722
(1020 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/903 (58%), Positives = 696/903 (77%), Gaps = 28/903 (3%)
Query: 58 QLTFSRESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSS 117
+L+ R + E+G++ +T E +E + + +DR WY +EG +D +
Sbjct: 289 RLSRGRGRREDGEEGISFDTEEERQQWE-------DDQRQADRDWYMMDEG---YDEFHN 338
Query: 118 SFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRG 177
D +++E L K+ ++ S + QI DN +WE ++L SG V
Sbjct: 339 PLAYSSDDYVRRREQHLHKQKQKR--------ISAQRRQINEDNERWETNRMLTSGVVHR 390
Query: 178 TELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSAL 237
E+ +F+++ KV L+VH+ PPFLDGRIVFTKQ EPV+P+KD TSD+AII+RKGS
Sbjct: 391 LEVDEDFEEDSAAKVHLMVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQT 450
Query: 238 VREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFS 297
VR+ RE++ + K++ + WELAG+++G+I+GVKK E D ++ E G++D+R + KF+
Sbjct: 451 VRKHREQKERKKAQHKHWELAGTKLGDIMGVKKEEE---PDKSLT-EDGKVDYRTEQKFA 506
Query: 298 QHMKK-GEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLT 356
HMKK EA S+FAK K++ EQRQYLPIF+V+ ELL +IR+N +V+VVGETGSGKTTQLT
Sbjct: 507 DHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLT 566
Query: 357 QYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIK 416
QYL EDGYT G++GCTQPRRVAAMSVAKRVSEEM LG++VGYAIRFED T STLIK
Sbjct: 567 QYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIK 626
Query: 417 YMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSAT 476
YMTDG+LLRE+L+++DLD Y I+MDEAHERSL+TDVLFG+L++VVARR D KLIVTSAT
Sbjct: 627 YMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSAT 686
Query: 477 LNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIF 536
++A+KF+ FFG+VPIFHIPGRTFPV+ L+SKTP EDYVEAAVKQ++ +H++ PGDILIF
Sbjct: 687 MDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIF 746
Query: 537 MTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKC 596
M GQ++IE + E +E+L P L +LPIYSQLP+DLQAKIF+KA +G RKC
Sbjct: 747 MPGQEDIEVTSDQIVEHLEEL-----ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKC 801
Query: 597 IVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTG 656
IVATNIAETSLTVDGI +VID+GY K+KV+NP++GMDALQ++P+S+A A+QR+GRAGRTG
Sbjct: 802 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTG 861
Query: 657 PGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENIL 716
PG C+RLYT+SAY NE+L + VPEIQRTNL NVVLLLKSL + +LL F FMDPPP++N+L
Sbjct: 862 PGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNML 921
Query: 717 NSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVP 776
NSMYQLW+LGAL+N G LT G MVEFPLDP L+KML++ +GC E+L IVSMLSVP
Sbjct: 922 NSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP 981
Query: 777 SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKA 836
++F+RPK R EESD REKF V ESDHL+ L VY QWK + Y WC +H++H K++RK
Sbjct: 982 AIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKV 1041
Query: 837 REVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHL 896
REVR+QL DI+ ++ L S G D+D+VRK IC+AYFH AA+LKG+GEY+N R GMPCHL
Sbjct: 1042 REVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHL 1101
Query: 897 HPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEH 956
HP+S+++G+GYTP+Y+VYHEL++TTKEYMQC TAV+ +WL+ELGPMF+SVK + S E+
Sbjct: 1102 HPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQEN 1161
Query: 957 KKK 959
+++
Sbjct: 1162 RRR 1164
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 1122 bits (2902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/863 (60%), Positives = 679/863 (78%), Gaps = 21/863 (2%)
Query: 98 SDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQI 157
+DR WY +EG +D + + +++E L K+ ++ S + QI
Sbjct: 322 ADRDWYMMDEG---YDEFHNPLAYSSEDYVRRREQHLHKQKQKR--------ISAQRRQI 370
Query: 158 TADNHQWEERQLLRSGAVRGTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPV 217
DN +WE ++L SG V E+ +F+++ KV L+VH+ PPFLDGRIVFTKQ EPV
Sbjct: 371 NEDNERWETNRMLTSGVVHRLEVDEDFEEDNAAKVHLMVHNLVPPFLDGRIVFTKQPEPV 430
Query: 218 MPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDA 277
+P+KD TSD+AII+RKGS VR+ RE++ + K++ + WELAG+++G+I+GVKK E
Sbjct: 431 IPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMGVKKEEE---P 487
Query: 278 DTAVVGEQGEIDFREDAKFSQHMK-KGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIR 336
D AV E G++D+R + KF+ HMK K EA S+FAK K++ EQRQYLPIF+V+ ELL +IR
Sbjct: 488 DKAVT-EDGKVDYRTEQKFADHMKRKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIR 546
Query: 337 ENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELG 396
+N +V+VVGETGSGKTTQLTQYL EDGYT G++GCTQPRRVAAMSVAKRVSEEM LG
Sbjct: 547 DNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLG 606
Query: 397 DKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFG 456
++VGYAIRFED T +TLIKYMTDG+LLRE+L+++DLD Y I+MDEAHERSL+TDVLFG
Sbjct: 607 EEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFG 666
Query: 457 ILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEA 516
+L++VVARR D KLIVTSAT++A+KF+ FFG+VPIFHIPGRTFPV+ L+SKTP EDYVEA
Sbjct: 667 LLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEA 726
Query: 517 AVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQ 576
AVKQ++ +H++ PGDILIFM GQ++IE + E +E+L P L +LPIYSQ
Sbjct: 727 AVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-----ENAPALAVLPIYSQ 781
Query: 577 LPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQ 636
LP+DLQAKIF+KA +G RKCIVATNIAETSLTVDGI +VID+GY K+KV+NP++GMDALQ
Sbjct: 782 LPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQ 841
Query: 637 VFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSL 696
++P+S+A A+QR+GRAGRTGPG C+RLYT+SAY NE+L + VPEIQRTNL NVVLLLKSL
Sbjct: 842 IYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL 901
Query: 697 KIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLM 756
+ +LL F FMDPPP++N+LNSMYQLW+LGAL+N G LT G MVEFPLDP L+KML++
Sbjct: 902 GVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIV 961
Query: 757 GEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEH 816
+GC E+L IVSMLSVP++F+RPK R EESD REKF V ESDHLT L VY QWK +
Sbjct: 962 SCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNN 1021
Query: 817 QYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNA 876
Y WC +H++H K++RK REVR+QL DI+ ++ L S G D+D+VRK IC+AYFH A
Sbjct: 1022 NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA 1081
Query: 877 ARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWL 936
A+LKG+GEY+N R GMPCHLHP+S+++G+GYTP+Y+VYHEL++TTKEYMQC TAV+ +WL
Sbjct: 1082 AKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWL 1141
Query: 937 SELGPMFFSVKDSDTSMLEHKKK 959
+ELGPMF+SVK + S E++++
Sbjct: 1142 AELGPMFYSVKQAGKSRQENRRR 1164
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/965 (55%), Positives = 709/965 (73%), Gaps = 41/965 (4%)
Query: 38 IRASGSSVKSSSSGYSRRSHQLTFSRESSQSFEDGVADETYSEEHNYEITESMRLEMEYN 97
I ++ S + + RR H+ +S +S ++ A+ T+ ++ E E + N
Sbjct: 175 ISSAWRSERRNRDDEKRRRHRK--PEDSVRSVKEEKAEPTFHDDEERAQWE----EEQKN 228
Query: 98 SDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQI 157
DR WYD E FD + + F D +K+E + ++ + R+++ Q I
Sbjct: 229 LDREWYDNEGA---FDDEYNPFNKVSDEFVEKREKQWQEKTQK---PRLTVKQQ----AI 278
Query: 158 TADNHQWEERQLLRSGAVR-GTELSTEFDDE-EEHKVILLVHDTKPPFLDGRIVFTKQAE 215
+N WE +L RSG V ELS+ F+DE +E++V +LV + PPFLDGRIVFTKQA+
Sbjct: 279 KRENELWENNRLHRSGVVAMADELSSIFEDETDENRVTILVQNIVPPFLDGRIVFTKQAQ 338
Query: 216 PVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKK----T 271
P++P+ D T DMA+ + +GS VR+ RE + + K++ + WELAGS++GN++GVK+ T
Sbjct: 339 PIIPVVDTTCDMAVSAARGSVAVRKRREVEDRKKAQDKHWELAGSKLGNLMGVKEKKDET 398
Query: 272 AEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDEL 331
A+ D D+ +++E +F+ HMK EAVSDFA K++ +QR+YLP+F+ R ++
Sbjct: 399 ADPEDDDSG--------NYKESHQFASHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKM 450
Query: 332 LQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEM 391
+ VIREN VV++VGETGSGKTTQL QYLLEDG+ +G++GCTQPRRVAAMSVA+RV++EM
Sbjct: 451 MNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEM 510
Query: 392 DTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLST 451
+LG VGYAIRFED T T+IKYMTDG+LLRE L D LD+Y I+MDEAHERSL+T
Sbjct: 511 GVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNT 570
Query: 452 DVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG-SVPIFHIPGRTFPVNTLYSKTPC 510
DVLFG+L++V+A+R D KLIVTSAT++A KF+DFFG + P F IPGRTFPV +++TP
Sbjct: 571 DVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPV 630
Query: 511 EDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLI 570
EDYV+AAVKQA+TIH+ GDILIFM GQ++IE C +KE++ +L E P L +
Sbjct: 631 EDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGEL-----DEAPPLAV 685
Query: 571 LPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKM 630
LPIYSQLP+DLQAKIF++A G RK IVATNIAETSLTVDGI +VID G+ KMKVYNP++
Sbjct: 686 LPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRI 745
Query: 631 GMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVV 690
GMDAL +FPVS+A+A+QR GRAGRTGPG CYRLYTE + +E+L S VPEIQRTNL NVV
Sbjct: 746 GMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVV 805
Query: 691 LLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPL 750
LLLKSL +D+LL F FMD PPQ+N+LNSMYQLW LGAL+N G LT +G KMVEFPLDP L
Sbjct: 806 LLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTL 865
Query: 751 AKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVY 810
+KML+M ++GC DEVLTIVSMLSVP++FFRPK R EE+DA +EKF V ESDHLT L VY
Sbjct: 866 SKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVY 925
Query: 811 QQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICS 870
QW+ H+Y WC ++YLHVK+L+K REVR+QL +I++ LK+PL S+G ++D+VRK ICS
Sbjct: 926 IQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICS 985
Query: 871 AYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATA 930
AYFHNAARLKG+GEY+N R G+PC LHP+SA++G+G+ P+YVVYHELI+T KEYMQC TA
Sbjct: 986 AYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTA 1045
Query: 931 VEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLRKIQADEERENKAKER 990
V+ WL+ELGPMF+S+K+S S E K + + ME EM +A +E E + +E
Sbjct: 1046 VDAIWLAELGPMFYSIKESKQSRKELKMESVRTVETMEAEMR-----EAQKEMERRKEES 1100
Query: 991 EKRVK 995
+K K
Sbjct: 1101 DKAFK 1105
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/992 (50%), Positives = 681/992 (68%), Gaps = 56/992 (5%)
Query: 14 PLSTPRSNGYAASPWDHISPSPVPIRASGSSVKSSSSGYSRRSHQLTFSRESSQSFEDGV 73
PLS+ R N + +GS SS YS H +S + S++
Sbjct: 221 PLSSKRRNRFG----------------NGSRRDVDSSKYS---HDSDYSYGAHSSWD--A 259
Query: 74 ADETYSEEHNYEITESMRLEMEY-NSDRAWYDREEGTTMFDTDS----SSFILGDDASYQ 128
D Y EE + R E E + DR WY E + + S F +D +++
Sbjct: 260 RDVEYPEEDPESKADRQRWEEEQAHLDRDWYMNSESQNLLGDEVHNPFSDFETVEDRAHE 319
Query: 129 KKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEE 188
+ +E K+ +S+ S + + N WE+ +++ SG + L +++ E
Sbjct: 320 AEFIEKQKK-------HLSIEASDRFKE----NSMWEKNRMITSGVSKAPGLESDYSLME 368
Query: 189 EHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQN 248
E +V LLV + +P FLDG +K+ + ++DP SD+AI +R GS LVRE RE + +
Sbjct: 369 ERRVHLLVDELRPHFLDGAEFSSKKVGDITSVRDPQSDLAINARLGSRLVRERREFRERQ 428
Query: 249 KSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSD 308
K+ LAG+ +GN++G+K + ++ DA + G + + Q KK ++
Sbjct: 429 KAASAATSLAGTSLGNVMGLKDSNDE-DA------KAGTTPVKVAGRSEQSNKKD---TE 478
Query: 309 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNG 368
FA++K+ EQR++LP F+VR++LL VIR+NQV++VVGETGSGKTTQL Q+L EDGY NG
Sbjct: 479 FARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNG 538
Query: 369 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 428
++GCTQPRRVAAMSVAKRVSEEM LG VGY+IRFEDVTGP T+IKYMTDGVLLRE+L
Sbjct: 539 MIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESL 598
Query: 429 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 488
++L+KY VI+MDEAHERSL+TD+L G+LKKV++RRRD KL+VTSAT+N+QKFSDFFG
Sbjct: 599 MQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGG 658
Query: 489 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACF 548
P F IPGRT+PV+ +++K PC DYVEAAV+Q + IH++ P GDIL+FMTGQ++IEA C
Sbjct: 659 APQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCE 718
Query: 549 ALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLT 608
+ +R+ QL + P L ILPIYSQ+PADLQAKIF+ A+ G RK +VATNIAETSLT
Sbjct: 719 IIADRLNQL-----HDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLT 773
Query: 609 VDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESA 668
V GI YV+DTGY K+K+YN K+G+D LQV P+S+A A+QRAGRAGRTGPG YRLYTE A
Sbjct: 774 VHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMA 833
Query: 669 YLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGAL 728
Y+ EM + +PEIQRTNL N VL+LKSL ++ + DFDFMD PP + ++ S+Y+LW LGAL
Sbjct: 834 YIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGAL 893
Query: 729 NNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEE 788
+N G LT LG KM FP+DP L+K++++ E C +E++TIVSMLSVPSVF+RPK+RAEE
Sbjct: 894 DNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEE 953
Query: 789 SDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILK 848
SDAAREKF V ESDHL LL +YQ W+ + Y WC +H+LH K+L++AR++R QL++I+
Sbjct: 954 SDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMS 1013
Query: 849 TLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYT 908
KI L S D+D+VR+ +CSAYFH AA KG+GEY++ R+GMPCHLH +S++YGLGY
Sbjct: 1014 KQKISLESVS-DWDIVRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYL 1072
Query: 909 PEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAME 968
P+YV+YHEL+LT+KEYM T+V+P WL+E G +++SVK+ + E + SK ++
Sbjct: 1073 PDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSVKERFRNETESYDRVFSSKPQLD 1132
Query: 969 EEMENLRKIQADEERENKAKEREKRVKERQQV 1000
++ R++ A ++ AK +E +R+ V
Sbjct: 1133 AQIAADRELDA---KQKLAKNQEPVKSKRKSV 1161
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/824 (47%), Positives = 563/824 (68%), Gaps = 41/824 (4%)
Query: 159 ADNHQWEERQLLRSGAVRGTELSTEFDDEEEHKVILLVHD--------------TKPPFL 204
A +W +QL+ SG + E+ +D E V L+ HD +P FL
Sbjct: 337 ASPDRWGYKQLIASGILSVPEMPN-YDKE----VGLVNHDEEQPEEDFDIERNEDEPQFL 391
Query: 205 DGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQ-----RFWELAG 259
G + +Q P+ +K P + + +AL +E +E++ Q ++ + L
Sbjct: 392 KGTRMNMQQLSPIKIVKKPNGSLQRAASTQTALSKERKEEKNQQRNEMMDSIPKDLSLPW 451
Query: 260 SQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQ--HMKKGEAVSDFAKSKTLAE 317
G + A+++ ++ G+ + + E K +Q H++ G+A S +++ E
Sbjct: 452 HDPMPEAGERHLAQEI---RSIAGQGIDTEIPEWKKVTQGSHIQYGKATS-----RSIKE 503
Query: 318 QRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRR 377
QR+ LPIF +R+ LQ + E+Q++VV+GETGSGKTTQ+ QYL E GY T G +GCTQPRR
Sbjct: 504 QRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRR 563
Query: 378 VAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYR 437
VAAMSV+KRV+EE +LG +VGYAIRFED T P T+IK+MTDG+LLRE L D +L Y
Sbjct: 564 VAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYS 623
Query: 438 VIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 497
VI++DEAHER++STDVLFG+LK+ + RR + K+++TSATL A+KFS +F + +F IPGR
Sbjct: 624 VIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLFIIPGR 683
Query: 498 TFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL 557
TFPV+ Y+K P DY++A++ M IH++ PPGDIL+F+TGQ+EI+AAC L ERM+ L
Sbjct: 684 TFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSL 743
Query: 558 ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVID 617
S+ VP+L+ILP+YS LP+++Q KIFE A G+RK ++ATNIAETSLT+DGI+YVID
Sbjct: 744 GSN----VPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVID 799
Query: 618 TGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSP 677
G+ K K +NPK GMD+L V P+S+AAA QR+GRAGRTGPG CYRLYTESA+ NEML S
Sbjct: 800 PGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASS 859
Query: 678 VPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDL 737
+PEIQRTNLGN VL +K++ I++LL+FDFMDPPP + ++++M QL+ LGAL+ G LT L
Sbjct: 860 IPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRL 919
Query: 738 GWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFF 797
G KM EFPLDP L+KML+ LGC DE+LT+V+MLSV +VF+RPK++ +D + KFF
Sbjct: 920 GRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFF 979
Query: 798 VQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSS 857
E DHLTLL VY+ WK ++ WC E+++ +SLR+A++VR QL+ I+ K+ + S+
Sbjct: 980 QPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLDIISA 1039
Query: 858 GHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHEL 917
G ++ ++KAICS +F NA++ Y G P ++HPSS ++ P++V+YHEL
Sbjct: 1040 GRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLF--NRNPDWVIYHEL 1097
Query: 918 ILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 961
++TTKEYM+ ++P+WL EL P FF D + + + K+K+K
Sbjct: 1098 VMTTKEYMREVCTIDPKWLVELAPKFFKTSDPN-KISKRKRKEK 1140
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/835 (48%), Positives = 561/835 (67%), Gaps = 48/835 (5%)
Query: 150 QSKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEEEHKVIL-------------LV 196
+ K+L++I+ D +WE +Q++ + + EF D +E IL +
Sbjct: 387 ERKRLTRIS-DPEKWEIKQMIAANVLS----KEEFPDFDEETGILPKVDDEEDEDLEIEL 441
Query: 197 HDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIRE-KQTQNKSRQRFW 255
+ +PPFL G + P+ +K+P ++ + SAL +E RE KQ Q ++
Sbjct: 442 VEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREA----- 496
Query: 256 ELAGSQMGNI-LGVKKTAEQVDADTAVVGEQGEIDFR-------EDAKFSQHMKKGEAVS 307
+M +I +G+ K VD G Q + R + ++ +H G S
Sbjct: 497 -----EMDSIPMGLNK--HWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKAS 549
Query: 308 DFAKSK-TLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTT 366
K++ ++ EQR+ LPI+ ++++L+Q + +NQ+++V+GETGSGKTTQ+TQYL E GYT+
Sbjct: 550 YGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS 609
Query: 367 NGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRE 426
G +GCTQPRRVAAMSVAKRVSEE LG +VGY IRFED T P T+IKYMTDG+LLRE
Sbjct: 610 RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRE 669
Query: 427 TLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFF 486
L D DL +Y +I++DEAHER++ TDVLFG+LKK V +R+D KLIVTSATL+A KFS +F
Sbjct: 670 CLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYF 729
Query: 487 GSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAA 546
PIF IPGRT+PV LY+K P DY++A++ M IH+T PPGDIL+F+TGQ+EI+ A
Sbjct: 730 YEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTA 789
Query: 547 CFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 606
C L ERM+ L +VPEL+ILP+YS LP+++Q +IF+ A G+RK ++ATNIAETS
Sbjct: 790 CEILYERMKSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 845
Query: 607 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTE 666
LT+DGI+YV+D G+ K KVYN K G+D L V P+S+A A QRAGRAGRTGPG CYRLYTE
Sbjct: 846 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 905
Query: 667 SAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLG 726
AY +EML + VPEIQRTNL + VL LK++ I++LL FDFMD PP E ++ +M QL+ LG
Sbjct: 906 RAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLG 965
Query: 727 ALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRA 786
AL++ G LT LG +M EFPL+P L KML+M LGC +E+LTIVSMLSV +VF+RPKD+
Sbjct: 966 ALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQ 1025
Query: 787 EESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDI 846
+D + KF E DHLTLL VY WK +++ WC E+++ +SLR+A+++R Q+L I
Sbjct: 1026 ALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGI 1085
Query: 847 LKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLG 906
+ K+ + S G V+KAICS +F NAA+ Y + ++HPSSA++
Sbjct: 1086 MDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFN-- 1143
Query: 907 YTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 961
PE+VVYHEL+LTTKEYM+ T ++P+WL E P FF V SD + L +KKQ+
Sbjct: 1144 RQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKV--SDPTKLSKQKKQQ 1196
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/835 (48%), Positives = 561/835 (67%), Gaps = 48/835 (5%)
Query: 150 QSKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEEEHKVIL-------------LV 196
+ K+L++I+ D +WE +Q++ + + EF D +E IL +
Sbjct: 411 ERKRLTRIS-DPEKWEIKQMIAANVLS----KEEFPDFDEETGILPKVDDEEDEDLEIEL 465
Query: 197 HDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIRE-KQTQNKSRQRFW 255
+ +PPFL G + P+ +K+P ++ + SAL +E RE KQ Q ++
Sbjct: 466 VEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREA----- 520
Query: 256 ELAGSQMGNI-LGVKKTAEQVDADTAVVGEQGEIDFR-------EDAKFSQHMKKGEAVS 307
+M +I +G+ K VD G Q + R + ++ +H G S
Sbjct: 521 -----EMDSIPMGLNK--HWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKAS 573
Query: 308 DFAKSK-TLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTT 366
K++ ++ EQR+ LPI+ ++++L+Q + +NQ+++V+GETGSGKTTQ+TQYL E GYT+
Sbjct: 574 YGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS 633
Query: 367 NGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRE 426
G +GCTQPRRVAAMSVAKRVSEE LG +VGY IRFED T P T+IKYMTDG+LLRE
Sbjct: 634 RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRE 693
Query: 427 TLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFF 486
L D DL +Y +I++DEAHER++ TDVLFG+LKK V +R+D KLIVTSATL+A KFS +F
Sbjct: 694 CLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYF 753
Query: 487 GSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAA 546
PIF IPGRT+PV LY+K P DY++A++ M IH+T PPGDIL+F+TGQ+EI+ A
Sbjct: 754 YEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTA 813
Query: 547 CFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 606
C L ERM+ L +VPEL+ILP+YS LP+++Q +IF+ A G+RK ++ATNIAETS
Sbjct: 814 CEILYERMKSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 869
Query: 607 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTE 666
LT+DGI+YV+D G+ K KVYN K G+D L V P+S+A A QRAGRAGRTGPG CYRLYTE
Sbjct: 870 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 929
Query: 667 SAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLG 726
AY +EML + VPEIQRTNL + VL LK++ I++LL FDFMD PP E ++ +M QL+ LG
Sbjct: 930 RAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLG 989
Query: 727 ALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRA 786
AL++ G LT LG +M EFPL+P L KML+M LGC +E+LTIVSMLSV +VF+RPKD+
Sbjct: 990 ALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQ 1049
Query: 787 EESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDI 846
+D + KF E DHLTLL VY WK +++ WC E+++ +SLR+A+++R Q+L I
Sbjct: 1050 ALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGI 1109
Query: 847 LKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLG 906
+ K+ + S G V+KAICS +F NAA+ Y + ++HPSSA++
Sbjct: 1110 MDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALF--N 1167
Query: 907 YTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 961
PE+VVYHEL+LTTKEYM+ T ++P+WL E P FF V SD + L +KKQ+
Sbjct: 1168 RQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKV--SDPTKLSKQKKQQ 1220
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/873 (46%), Positives = 579/873 (66%), Gaps = 50/873 (5%)
Query: 113 DTDSSSFILGDDASYQKKEVELAK------RLVRKDGSRMSLAQSKKLSQITADNHQWEE 166
D D SS + SY+ K+ ++ K R+V ++ +A S++ + + +WE
Sbjct: 301 DEDDSS---RSNPSYRTKDGQVTKTGISGIRIVEEN----DVAPSRRPLKKMSSPERWEA 353
Query: 167 RQLLRSGAVRGTELSTEFDDEE---------EHKVILLVHDTKPPFLDGRIVFTKQAEPV 217
+QL+ SG +R E +D + E ++ + +++ +P FL G+ ++ PV
Sbjct: 354 KQLIASGVLRVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPV 413
Query: 218 MPIKDPTSDMAIISRKGSALV---REIREKQTQN------KSRQRFWELAGSQMGNILGV 268
K+P ++ + SAL RE+RE+Q + K R WE + G +
Sbjct: 414 KIFKNPEGSLSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGE-RHL 472
Query: 269 KKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVR 328
+ V + E + F + F Q K ++ EQR+ LPI+ ++
Sbjct: 473 AQELRGVGLSAYDMPEWKKDAFGKTPTFGQRSKL-----------SIQEQRESLPIYKLK 521
Query: 329 DELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVS 388
EL+Q + +NQV+VV+GETGSGKTTQ+TQYL E GYTT G +GCTQPRRVAAMSVAKRV+
Sbjct: 522 KELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVA 581
Query: 389 EEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERS 448
EE LG++VGYAIRFED TGP T+IKYMTDG+LLRE L D +L +Y VI++DEAHER+
Sbjct: 582 EEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERT 641
Query: 449 LSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKT 508
+ TDVLFG+LKK++ RR D +LIVTSATL+A+KFS +F + IF IPGRTFPV LY+K
Sbjct: 642 IHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQ 701
Query: 509 PCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPEL 568
P DY++AA+ + IH+T P GDIL+F+TGQ+EI++AC +L ERM+ L + VPEL
Sbjct: 702 PETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGL----GKNVPEL 757
Query: 569 LILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNP 628
+ILP+YS LP+++Q++IF+ G RK +VATNIAE SLT+DGI+YV+D G+ K VYNP
Sbjct: 758 IILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNP 817
Query: 629 KMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGN 688
K G+++L + P+S+A+A QRAGRAGRTGPG CYRLYTESAY NEM P+ +PEIQR NLG
Sbjct: 818 KQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGM 877
Query: 689 VVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDP 748
L +K++ I++LL FDFMDPP + ++++M QL+ LGAL+ G LT LG KM EFPL+P
Sbjct: 878 TTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEP 937
Query: 749 PLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLY 808
PL+KMLL LGC DE+LT+++M+ ++F+RP+++ ++D R KFF E DHLTLL
Sbjct: 938 PLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLA 997
Query: 809 VYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAI 868
VY+ WK + G WC E+++ +SLR+A++VR QLL I+ K+ + ++G +F +RKAI
Sbjct: 998 VYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAI 1057
Query: 869 CSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCA 928
+ +F + AR Y P ++HPSSA++ P++V+YH+L++TTKEYM+
Sbjct: 1058 TAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALF--QRQPDWVIYHDLVMTTKEYMREV 1115
Query: 929 TAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 961
T ++P+WL EL P FF V D T M + K++++
Sbjct: 1116 TVIDPKWLVELAPRFFKVSDP-TKMSKRKRQER 1147
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/812 (48%), Positives = 545/812 (67%), Gaps = 22/812 (2%)
Query: 163 QWEERQLLRSGAVRGTELST---------EFDDEE--EHKVILLVHDTKPPFLDGRIVFT 211
+WE RQ+ +G + T++ +DDE E I LV D +P FL G
Sbjct: 370 RWELRQMQGAGVLTATDMPDFDEEMGVLRNYDDESDGEDIEIELVED-EPDFLRGYGKGG 428
Query: 212 KQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQ-NKSRQRFWELAGSQMGNILGVKK 270
+ EPV +K+P +A + AL +E +E + Q + R + S IL
Sbjct: 429 AEIEPVKVVKNPDGSLAQAALMQGALSKERKETKIQAQRERDMDTQKGFSSNARILD-PM 487
Query: 271 TAEQVDADTAVVGEQGEIDFREDAKFSQHMKKG-EAVSDFAKSKTLAEQRQYLPIFSVRD 329
+ Q A +A + +E ++ +H+ G +A + ++ EQR+ LPIF+++
Sbjct: 488 SGNQSTAWSADESKDRNNKMKEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKK 547
Query: 330 ELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSE 389
L++ + +NQ++VVVGETGSGKTTQ+TQY +E G G +GCTQPRRVAAMSVAKRV+E
Sbjct: 548 NLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAE 607
Query: 390 EMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSL 449
E +LG VGY IRFED T T+IKYMTDG+LLRE L D DL Y +I++DEAHER++
Sbjct: 608 EYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTI 667
Query: 450 STDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTP 509
TDVLFG+LK +R + KLI+TSATL++ KFS++F PIF IPGRTFPV LY++ P
Sbjct: 668 HTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREP 727
Query: 510 CEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL 569
DY+EAA M IH+T PPGD+L+F+TGQ+EI+ +C L ERM+ S +VPEL+
Sbjct: 728 ESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMK----SMGPDVPELI 783
Query: 570 ILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPK 629
ILP+Y LP+++Q +IF+ A G RK ++ATNIAETSLT+DGIFYV+D G+ K K+YNPK
Sbjct: 784 ILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPK 843
Query: 630 MGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNV 689
GMD+L V P+S+AAA QR+GRAGRTGPG CYRLYTE A+ +EMLP+PVPEIQRTNL +
Sbjct: 844 SGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLAST 903
Query: 690 VLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPP 749
+L LK++ I+NL+DFDFMD PP ++++ ++ L L AL+ G LT LG +M EFPL+P
Sbjct: 904 LLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPS 963
Query: 750 LAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYV 809
L+K+L+M LGC +EVLTIV+ML+V ++F+RPK++ + +D + KF E DHLTLL V
Sbjct: 964 LSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAV 1023
Query: 810 YQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAIC 869
Y WK H + WC E+++ V+S+++A+++R QLL I+ K+ + S G D V+KAIC
Sbjct: 1024 YNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAIC 1083
Query: 870 SAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCAT 929
S +F NAA+ Y +G ++HPSSA + PE+VVYHEL++TTKEYM+ T
Sbjct: 1084 SGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACF--QQQPEWVVYHELVMTTKEYMREVT 1141
Query: 930 AVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 961
A++P+WL E P FF + DS T + K+ QK
Sbjct: 1142 AIDPKWLVEFAPSFFKIGDS-TKLSTFKRNQK 1172
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/811 (45%), Positives = 546/811 (67%), Gaps = 40/811 (4%)
Query: 164 WEERQLLRSGAVRGTEL-----------STEFDDEEEHKVILLVHDTKPPFLDGRIVFTK 212
WE +QL SGA+ T++ + E + E++ V + + + +P FL G+ +
Sbjct: 340 WELQQLAASGAISATDIPELNDGFNTNNAAEINPEDDEDVEIELREEEPGFLAGQTKVSL 399
Query: 213 QAEPVMPIKDPTSDMAIISRKGSALV---REIREKQTQNKSRQRF--------WELAGSQ 261
+ P+ +K P ++ + +G L REIR+K+ + KS Q W+ S
Sbjct: 400 KLSPIKVVKAPDGSLSRAAMQGQILANDRREIRQKEAKLKSEQEMEKQDLSLSWQDTMSN 459
Query: 262 MGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQY 321
+ +K A+ V D+A E A + ++ G+ + ++ EQR+
Sbjct: 460 PQD----RKFAQDV-RDSAARQLTSETPSWRQATRNANISYGKRTT-----LSMKEQREG 509
Query: 322 LPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNG-IVGCTQPRRVAA 380
LP+F +R + L+ + +NQ++V++GETGSGKTTQ+TQYL E+GYT++ ++GCTQPRRVAA
Sbjct: 510 LPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAA 569
Query: 381 MSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIV 440
MSVAKRV+EE+ +G++VGY IRFED T T IKYMTDG+L RE L D L KY VI+
Sbjct: 570 MSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVII 629
Query: 441 MDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFP 500
+DEAHER+++TDVLFG+LK V +R D KLIVTSATL+A++FS +F PIF IPGR++P
Sbjct: 630 LDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYP 689
Query: 501 VNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISS 560
V +Y+K P DY++AA+ M IH++ PGDIL+F+TGQ+EI+ +C L ER + L S
Sbjct: 690 VEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDS 749
Query: 561 TTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGY 620
+PEL+ILP+YS LP+++Q++IFE A G RK ++ATNIAETSLT+DGI+YV+D G+
Sbjct: 750 ----IPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGF 805
Query: 621 GKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPE 680
K ++PK+GMD+L V P+S+A A QR+GRAGRTGPG CYRLYTESAY NEMLPSP+PE
Sbjct: 806 VKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPE 865
Query: 681 IQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWK 740
IQR NL + +L+LK++ I++LL+FDFMDPPP + ++ ++ L+ L AL++ G LT LG K
Sbjct: 866 IQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRK 925
Query: 741 MVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQE 800
M +FP++P L+K+L+ +LGC +E+L+I++MLSVP+++ RP+++ +E+D R +F E
Sbjct: 926 MADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQRAQFANPE 985
Query: 801 SDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHD 860
SDHLTLL VY WK ++ +WC EHY+ + +R+A +VR QL+ ++ + P+ S G
Sbjct: 986 SDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRHPVVSCGRK 1045
Query: 861 FDVVRKAICSAYFHNAA-RLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELIL 919
+++ +A+CS YF N A R G Y P ++HPS ++ G E+V+YHELI
Sbjct: 1046 RELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLF--GKAAEWVIYHELIQ 1103
Query: 920 TTKEYMQCATAVEPQWLSELGPMFFSVKDSD 950
T+KEYM + V P+WL E+ P FF +++
Sbjct: 1104 TSKEYMHTVSTVNPKWLVEVAPTFFKFANAN 1134
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/745 (51%), Positives = 520/745 (69%), Gaps = 36/745 (4%)
Query: 217 VMPIKDPTSDMAIISRKGSALV--REIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQ 274
V P ++P S+ + +++GS LV R I + Q +SR L + MG +LG++ +
Sbjct: 264 VNPFRNPDSEFSANAKRGSKLVALRRINMEHIQ-QSRDNTTVL-NTAMGEVLGLENNNK- 320
Query: 275 VDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKT-LAEQRQYLPIFSVRDELLQ 333
AK + K + + F SK + ++ LP+F R +LL
Sbjct: 321 -------------------AKDKSNQKICDDTALFTPSKDDIKHTKEQLPVFRCRSQLLS 361
Query: 334 VIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTN--GIVGCTQPRRVAAMSVAKRVSEEM 391
+IRENQVVV++GETGSGKTTQL QYL E+GY + + TQPRRVAA+SVAKRV+ EM
Sbjct: 362 LIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPRRVAAISVAKRVAMEM 421
Query: 392 DTELGDKVGYAIRFEDVT-GPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLS 450
LG +VGY+IRFEDVT T +K++TDG+LLRETL D LDKY +++DEAHERSL+
Sbjct: 422 QVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSCVIIDEAHERSLN 481
Query: 451 TDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPC 510
TD+L G K ++ARRRD KLI+TSAT+NA+KFS FFG+ P F IPGRTFPV T+Y+ P
Sbjct: 482 TDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPV 541
Query: 511 EDYVEAAVKQAMTIHITS--PPGDILIFMTGQDEIEAACFALKERMEQLIS-----STTR 563
+DYVEAAV QA+ IH+ + GDILIFMTGQ++IE L+E+ Q+ S +
Sbjct: 542 QDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFE 601
Query: 564 EVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKM 623
E+ ++ ILPIYS LPADLQ KIF+ RK I+ATNIAETSLT+ GI YVID GY K+
Sbjct: 602 EINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKL 661
Query: 624 KVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQR 683
KVYNPK+G+D+L + P+S+A ADQR+GRAGRT PGT YRLYTE + +M +PEIQR
Sbjct: 662 KVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQR 721
Query: 684 TNLGNVVLLLKSLKI-DNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMV 742
TNL N +LLLKSL + D L F F+D PP + L+S+Y+LW +GA++ G LT LG +M
Sbjct: 722 TNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLTPLGLQMA 781
Query: 743 EFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESD 802
+FPL P L+K+LL+ + GC DE+LTIVSMLSVP VF+RPK+R +E+D AR KFF+ +SD
Sbjct: 782 KFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPKERQKEADIARNKFFIAKSD 841
Query: 803 HLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFD 862
HLTLL V++QW+ + + WC +H++ KSL +AR++R QLL ILK+ KIP+ SSG D+D
Sbjct: 842 HLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQLLTILKSQKIPVISSGKDWD 901
Query: 863 VVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTK 922
+++K ICS + H AA++ G+ Y++ + G+ LHP+SA++GLG P YVVYHEL++T+K
Sbjct: 902 IIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSALHGLGDLPPYVVYHELLMTSK 961
Query: 923 EYMQCATAVEPQWLSELGPMFFSVK 947
EY+ C T+V+P WL E G + + +K
Sbjct: 962 EYICCVTSVDPFWLMEYGGLLYDIK 986
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/673 (51%), Positives = 489/673 (72%), Gaps = 13/673 (1%)
Query: 315 LAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQ 374
++ QRQ LP++++R EL+Q +R+NQ +V+VGETGSGKTTQ+TQYL E+G++ G++GCTQ
Sbjct: 476 ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQ 535
Query: 375 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLD 434
PRRVAA+SVAKRV+EE+ ++G VGY IRFEDVTGP T IKYMTDG+L RE L D ++
Sbjct: 536 PRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMS 595
Query: 435 KYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHI 494
KY VI++DEAHER+++TDVLF +LKK +R + K+IVTSATLN+ KFS++F + PI +I
Sbjct: 596 KYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINI 655
Query: 495 PGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERM 554
PG+TFPV LYS+TP DY+EAA+ + IHI PGDIL+F+TGQ+EI++ C L +R+
Sbjct: 656 PGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRV 715
Query: 555 EQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFY 614
+ L S + ELLILP+YS LP+++Q+KIFE +G+RK + ATNIAETS+T+DGI+Y
Sbjct: 716 KTLGDS----IGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYY 771
Query: 615 VIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEML 674
V+D G+ K+ +YN + G++ L V P+S+A A+QR GRAGRTGPG CYRLYTESA+ NEML
Sbjct: 772 VVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEML 831
Query: 675 PSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGAL 734
+ VPEIQR NL + +L+LK++ I++LL FDFMDPPP+ +LN++ +L+ L +L++ G L
Sbjct: 832 ENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKL 891
Query: 735 TDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARE 794
T+LG +M FP+DP L++ LL C DE++TI+SMLSV +VF+RPKDR E+D+ +
Sbjct: 892 TNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKA 951
Query: 795 KFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPL 854
KF DHLTLL VY +W++ Y +C+ ++LH + L++AR+V+SQ+ I K + + L
Sbjct: 952 KFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKL 1011
Query: 855 TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVY 914
S D D++RK S +F NAA+ Y G +HPSS++YG Y EYV+Y
Sbjct: 1012 ISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEY--EYVMY 1069
Query: 915 HELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK----ESKTAMEEE 970
H ++LT++EYM T++EPQWL E+ P F+ D+++ + +KK K +K A ++
Sbjct: 1070 HSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAES---QSRKKAKIIPLHNKFAKDQN 1126
Query: 971 MENLRKIQADEER 983
L I+ ER
Sbjct: 1127 SWRLSSIRQSRER 1139
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/730 (47%), Positives = 489/730 (66%), Gaps = 25/730 (3%)
Query: 252 QRFWELAGSQMGNI-LGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFA 310
QR WE A ++ G + A Q V+ E+ I+F + +G+
Sbjct: 326 QRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQL-----QGDEEPSAP 380
Query: 311 KSKTLAEQ-------RQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDG 363
+ T A+Q R+ LP+F R+ELL I +QV+++ GETGSGKTTQ+ QYL E+G
Sbjct: 381 PTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEG 440
Query: 364 YTTNGI-VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGV 422
YT G+ + CTQPRRVAAMSVA RV+ EM +LG++VGY+IRFED T T+++YMTDG+
Sbjct: 441 YTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGM 500
Query: 423 LLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKF 482
LLRE L + DL Y V+++DEAHER+L TD+LFG++K V R + K++V SAT++ +F
Sbjct: 501 LLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARF 560
Query: 483 SDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDE 542
S FF P+F IPGR FPV+ Y+K P DY+EA V + IH+T PPGDIL+F+TGQ+E
Sbjct: 561 STFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEE 620
Query: 543 IEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNI 602
IEAAC L++R +L S ++ ELL+LPIY+ LP+D+QA+IF+ G RK +VATNI
Sbjct: 621 IEAACEMLQDRCRRLGS----KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 676
Query: 603 AETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYR 662
AETSLT++GI YV+D G+ K K YNP+ GM++L V P S+A+A+QRAGRAGR G C+R
Sbjct: 677 AETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFR 736
Query: 663 LYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQL 722
LYT AY +E+ + VPEIQRT+LGNVVLLLKSL I +L+ FDF+DPPP E +L ++ QL
Sbjct: 737 LYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQL 796
Query: 723 WVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV-PSVFFR 781
+ LGALN++G LT G KM E P+DP L+KM+L E+ C +E+LT+ +MLSV S+F+R
Sbjct: 797 YALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR 856
Query: 782 PKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRS 841
PKD+ +D AR FF+ DHL LL VY QW E Y WC E+++ +S+R+AR+VR
Sbjct: 857 PKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVRE 916
Query: 842 QLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSA 901
QL +L+ +++ L+S D+ VRKAI + YF++ ARL G Y + +HP+S+
Sbjct: 917 QLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSS 975
Query: 902 IYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 961
++ P +++YHEL+LTTKE+M+ +E WL E+ P ++ K+ + H KK
Sbjct: 976 LF--EQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP---HAKKMP 1030
Query: 962 ESKTAMEEEM 971
+ EE+
Sbjct: 1031 KKIGKTREEL 1040
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/730 (47%), Positives = 488/730 (66%), Gaps = 25/730 (3%)
Query: 252 QRFWELAGSQMGNI-LGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFA 310
QR WE A ++ G + A Q V+ E+ I+F + +G
Sbjct: 329 QRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQL-----QGNEEPSAP 383
Query: 311 KSKTLAEQ-------RQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDG 363
+ T A+Q R+ LP+F R+ELL I +QV+++ GETGSGKTTQ+ QYL E+G
Sbjct: 384 PTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEG 443
Query: 364 YTTNGI-VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGV 422
YT G+ + CTQPRRVAAMSVA RV+ EM +LG++VGY+IRFED T T+++YMTDG+
Sbjct: 444 YTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGM 503
Query: 423 LLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKF 482
LLRE L + DL Y V+++DEAHER+L TD+LFG++K V R + K++V SAT++ +F
Sbjct: 504 LLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARF 563
Query: 483 SDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDE 542
S FF P+F IPGR FPV+ Y+K P DY+EA V + IH+T PPGDIL+F+TGQ+E
Sbjct: 564 STFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEE 623
Query: 543 IEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNI 602
IEAAC L++R +L S ++ ELL+LPIY+ LP+D+QA+IF+ G RK +VATNI
Sbjct: 624 IEAACEMLQDRCRRLGS----KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 679
Query: 603 AETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYR 662
AETSLT++GI YV+D G+ K K YNP+ GM++L V P S+A+A+QRAGRAGR G C+R
Sbjct: 680 AETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFR 739
Query: 663 LYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQL 722
LYT AY +E+ + VPEIQRT+LGNVVLLLKSL I +L+ FDF+DPPP E +L ++ QL
Sbjct: 740 LYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQL 799
Query: 723 WVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV-PSVFFR 781
+ LGALN++G LT G KM E P+DP L+KM+L E+ C +E+LT+ +MLSV S+F+R
Sbjct: 800 YALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR 859
Query: 782 PKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRS 841
PKD+ +D AR FF+ DHL LL VY QW E Y WC E+++ +S+R+AR+VR
Sbjct: 860 PKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVRE 919
Query: 842 QLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSA 901
QL +L+ +++ L+S D+ VRKAI + YF++ ARL G Y + +HP+S+
Sbjct: 920 QLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSS 978
Query: 902 IYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 961
++ P +++YHEL+LTTKE+M+ +E WL E+ P ++ K+ + H KK
Sbjct: 979 LF--EQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP---HAKKMP 1033
Query: 962 ESKTAMEEEM 971
+ EE+
Sbjct: 1034 KKIGKTREEL 1043
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/725 (47%), Positives = 488/725 (67%), Gaps = 15/725 (2%)
Query: 252 QRFWELAGSQMGNI-LGVKKTAEQVDADTAVVGEQGEIDFREDAKFS--QHMKKGEAVSD 308
QR WE A ++ G + A Q V+ E+ I+F + + A +
Sbjct: 330 QRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGDEEPAAPPAPTQ 389
Query: 309 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNG 368
+ +++ R+ LP+F R+ELL + +Q++++ GETGSGKTTQ+ QYL E+GYT G
Sbjct: 390 AQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKG 449
Query: 369 I-VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRET 427
+ + CTQPRRVAAMSVA RV+ EM +LG++VGY+IRFED T T+++YMTDG+LLRE
Sbjct: 450 MKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREF 509
Query: 428 LKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG 487
L + DL Y V+++DEAHER+L TD+LFG++K V R + K++V SATL+ +FS FF
Sbjct: 510 LSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFD 569
Query: 488 SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAAC 547
P+F IPGR FPV+ Y+K P DY+EA V + IH+T PPGDIL+F+TGQ+EIEAAC
Sbjct: 570 DAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAAC 629
Query: 548 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSL 607
L++R +L S ++ ELL+LPIY+ LP+D+QA+IF+ G RK +VATNIAETSL
Sbjct: 630 EMLQDRCRRLGS----KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSL 685
Query: 608 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTES 667
T++GI YV+D G+ K K YNP+ GM++L V P S+A+A+QRAGRAGR G C+RLYT
Sbjct: 686 TIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAW 745
Query: 668 AYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGA 727
AY +E+ + VPEIQRT+LGNVVLLLKSL I +L+ FDF+DPPP E +L ++ QL+ LGA
Sbjct: 746 AYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGA 805
Query: 728 LNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV-PSVFFRPKDRA 786
LN++G LT G KM E P+DP L+KM+L E+ C +E+LT+ +MLSV S+F+RPKD+
Sbjct: 806 LNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKV 865
Query: 787 EESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDI 846
+D AR FF+ DHL LL VY QW E Y WC E+++ +S+R+AR+VR QL +
Sbjct: 866 VHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGL 925
Query: 847 LKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLG 906
L+ +++ L+S D+ VRKAI + YF++ ARL G Y + +HP+S+++
Sbjct: 926 LERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLF--E 982
Query: 907 YTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTA 966
P +++YHEL+LTTKE+M+ +E WL E+ P ++ K+ + H KK +
Sbjct: 983 EQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP---HAKKMPKKTGK 1039
Query: 967 MEEEM 971
EE+
Sbjct: 1040 TREEL 1044
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/689 (48%), Positives = 476/689 (69%), Gaps = 15/689 (2%)
Query: 281 VVGEQGEIDFREDAKFS-QHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQ 339
V E +IDF D K S ++ + ++D K+L R+ LP++ +D+LL+ I E Q
Sbjct: 376 VFDESQQIDFLLDTKLSAENPVDTDKMTDVKVEKSLESSRKSLPVYQYKDDLLKAINEYQ 435
Query: 340 VVVVVGETGSGKTTQLTQYLLEDGYTT-NGIVGCTQPRRVAAMSVAKRVSEEMDTELGDK 398
V+++V ETGSGKTTQL Q+L E GYT N + CTQPRRVAAMSVA RV++EMD LG +
Sbjct: 436 VLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVAAMSVAARVAKEMDVRLGQE 495
Query: 399 VGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGIL 458
VGY+IRFE+ T T+IKY+TDG+LLRE L + DL Y VI++DEAHER+L TD+LFG++
Sbjct: 496 VGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLV 555
Query: 459 KKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAV 518
K + R D K++++SAT++A+KFS +F P+F++PGR +PV+ Y+ P +Y++AA+
Sbjct: 556 KDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQAAI 615
Query: 519 KQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLP 578
+ IH T P GDIL+F+TGQDEIE + E M++L + +PE+++ PIY+ LP
Sbjct: 616 TTILQIHTTQPAGDILVFLTGQDEIEL----MSENMQELCRILGKRIPEIILCPIYANLP 671
Query: 579 ADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVF 638
++LQAKIF+ G RK ++ATNIAETS+T+DG+ +VID+G+ K +YNP+ GM++L
Sbjct: 672 SELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSV 731
Query: 639 PVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKI 698
P SRA+ADQRAGRAGR GPG C+RLYT Y NE+ PEIQRTNL N+VLLLKSL I
Sbjct: 732 PCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGI 791
Query: 699 DNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGE 758
+NLLDFDFMD PP E ++ S+ L+ LGALNN G LT LG +M EFP DP L+K L+
Sbjct: 792 NNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASS 851
Query: 759 QLGCLDEVLTIVSMLS-VPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQ 817
+ GC++EVL+IVSML S+F+RPKD+ E+D AR F DHLTLL+++ +W +
Sbjct: 852 KYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANFTQPGGDHLTLLHIWNEWVDTD 911
Query: 818 YRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPL-TSSGHDFDVVRKAICSAYFHNA 876
+ +W E++L KSL +AR+VR QL ++ + ++I L T+S D ++KAI + YF NA
Sbjct: 912 FSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVTNSSESLDPIKKAITAGYFSNA 971
Query: 877 ARLKGVGE-YINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQW 935
ARL G+ Y ++ ++HPSS++ P+ ++Y EL+LTTKEY + T ++P+W
Sbjct: 972 ARLDRSGDSYRTVKSNQTVYIHPSSSV--AEKKPKVIIYFELVLTTKEYCRQITEIQPEW 1029
Query: 936 LSELGPMFFSVKDSDTSMLEHKKKQKESK 964
L E+ P +F ++ + E +K QK K
Sbjct: 1030 LLEISPHYFKPENIE----ELQKTQKRHK 1054
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/711 (48%), Positives = 492/711 (69%), Gaps = 24/711 (3%)
Query: 247 QNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQH------- 299
QN+ + E G NI G + E V D +I+F ++ Q
Sbjct: 393 QNRMKSAISENRGLSTANIGGGNEEYEYVFED--------QIEFIKEEVLKQGQKGDGVM 444
Query: 300 -MKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQY 358
+K G+ S AK T+ E R+ LP++ R++L+ +RE QV+++VGETGSGKTTQ+ QY
Sbjct: 445 ILKPGDDGSAQAKM-TIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQY 503
Query: 359 LLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYM 418
L E G++ G +GCTQPRRVAAMSVA RV+EE+ +LG++VGY+IRFED T T+++YM
Sbjct: 504 LHEAGFSKTGKIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYM 563
Query: 419 TDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLN 478
TDG+L+RE L DL Y V+++DEAHER+L TD+LFG+LK + R D KL+++SAT++
Sbjct: 564 TDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMD 623
Query: 479 AQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMT 538
A++FSD+F P F+IPGR + V T Y++ P DY++AAV + IHIT P GDIL+F+T
Sbjct: 624 AERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLT 683
Query: 539 GQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIV 598
GQ+E++ A L+ R L + ++ EL+I IYS LP DLQAKIFE RK ++
Sbjct: 684 GQEEVDQAAEMLQTRTRGLGT----KIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVL 739
Query: 599 ATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPG 658
ATNIAETSLT+DGI YVID G+ K K++NP+ GM++L + PVSRA+A+QR GRAGR PG
Sbjct: 740 ATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPG 799
Query: 659 TCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNS 718
C+RL+T A+ NE+ + +PEIQRTNLGNVVLLLKS+ I++L++FDFMDPPP + ++ +
Sbjct: 800 KCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAA 859
Query: 719 MYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV-PS 777
+ QL+ LGALN+ G LT LG KM EFP+DP L+KM++ E+ C +E+LTI +MLSV +
Sbjct: 860 LEQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNT 919
Query: 778 VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAR 837
+F+RPKD+A +DAAR+ FF + DHLTL+ V+ QW+E Y WC E+++ +S+++A+
Sbjct: 920 IFYRPKDKAFAADAARKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQ 979
Query: 838 EVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLH 897
+VR QL +L+ ++IPL S+ D D +RK I S +F+N+A+L+ G + ++ +H
Sbjct: 980 DVRDQLELLLERVEIPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIH 1039
Query: 898 PSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 948
PSS ++ P++VVYHEL+LTTKE+M+ ++ WL E+ P + KD
Sbjct: 1040 PSSCLF--QSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKD 1088
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/637 (50%), Positives = 458/637 (71%), Gaps = 10/637 (1%)
Query: 311 KSKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGI- 369
K ++ E R+ LP+++ RD ++ ++E+QV+++ GETGSGKTTQL QYL E G+ G
Sbjct: 353 KKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKR 412
Query: 370 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 429
+GCTQPRRVAAMSVA RV++E+ +LG +VGY+IRFED T T++KYMTDG+LLRE L
Sbjct: 413 IGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLN 472
Query: 430 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSV 489
+ DL Y V+++DEAHER+L TD+LFG++K + R+D KL+++SATL+A+KFS FF
Sbjct: 473 EPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDA 532
Query: 490 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSP-PGDILIFMTGQDEIEAACF 548
PIF IPGR FPV+ Y++ P DYV+AA+ M IH+T P PGDIL+F+TGQ+EIE
Sbjct: 533 PIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQE 592
Query: 549 ALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLT 608
AL ER + L S ++ EL+ LP+Y+ LP+DLQAKIFE + RK ++ATNIAETS+T
Sbjct: 593 ALMERSKALGS----KIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVT 648
Query: 609 VDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESA 668
+DGI YVID G+ K ++ + G++ L V +S+AAA+QRAGRAGRTGPG C+RLYT A
Sbjct: 649 IDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWA 708
Query: 669 YLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGAL 728
Y +E+ P+PEIQRTNLGNVVL+LKSL I +L+ FDF+DPPPQE ++ ++ QL+ LGAL
Sbjct: 709 YKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGAL 768
Query: 729 NNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV-PSVFFRPKDRAE 787
N+ G LT LG +M EFP DP ++KM++ E+ C +E++TI +MLS +VF+RPK +
Sbjct: 769 NHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVI 828
Query: 788 ESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDIL 847
+D+AR+ F+ DH+TL+ VY +W+E + WC E+Y+ +++++AR+VR QL+ +L
Sbjct: 829 HADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLL 888
Query: 848 KTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGY 907
+ ++I T S D +RKAI + YF+N ++L G Y ++ H HP+S ++
Sbjct: 889 ERVEIE-TKSSTDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLF--EE 945
Query: 908 TPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 944
TP +VVY EL+ T+KE+M+ + +E WL E+ P ++
Sbjct: 946 TPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYY 982
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 627 bits (1618), Expect = e-178, Method: Compositional matrix adjust.
Identities = 314/702 (44%), Positives = 456/702 (64%), Gaps = 37/702 (5%)
Query: 280 AVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQ 339
A E+G +F D FSQ+ K + E R+ LP++ R+E L++ ENQ
Sbjct: 45 AAKAEEGPNNFFNDKPFSQNYFK------------ILETRRELPVYQQREEFLKIYHENQ 92
Query: 340 VVVVVGETGSGKTTQLTQYLLED--GYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGD 397
++V VGETGSGKTTQ+ Q++L D + TN + CTQPRRVAAMSVAKRV++EMD +LG+
Sbjct: 93 IIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGE 152
Query: 398 KVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGI 457
+VGY IRFED +GP+TL+KYMTDG+LLRE + D L +Y I++DEAHER+L+TD+L G+
Sbjct: 153 EVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGL 212
Query: 458 LKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAA 517
+K++ RR D K+IV SATL+A+KF +F P+ +PGRT+PV Y++ P DY+EAA
Sbjct: 213 MKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAA 272
Query: 518 VKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQL 577
++ + IH+ PGDIL+F+TG++EIE AC + + L+ L + P+Y L
Sbjct: 273 LRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDLVREGA--AGPLKVYPLYGSL 330
Query: 578 PADLQAKIFEKAKEGT-----RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGM 632
P + Q +IFE E T RK +++TNIAETSLT+DGI YV+D G+ K K+YNP++ +
Sbjct: 331 PPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRV 390
Query: 633 DALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLL 692
++L V P+S+A+A QRAGRAGRT PG C+RLYTE A+ E++ PEI R+NL + VL
Sbjct: 391 ESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLE 450
Query: 693 LKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAK 752
LK L ID+L+ FD+MDPP E ++ ++ +L L L++ G LT LG K EFPLDP LA
Sbjct: 451 LKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAV 510
Query: 753 MLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQ 812
ML+ + C +EVL++ ++LSVP+VF RP + +D R++F + DHLTLL VY
Sbjct: 511 MLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHA 570
Query: 813 WKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHD----FDVVRKAI 868
+K + DWC H+L ++L A VR QL ++ ++ L S+ D + +R+A+
Sbjct: 571 YKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRAL 630
Query: 869 CSAYFHNAARLKGVGE-YINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQC 927
S +F A+ G+ Y+ ++ LHPS GL TPE+VVY+E +LTTK +++
Sbjct: 631 VSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSC---GLSVTPEWVVYNEFVLTTKSFIRN 687
Query: 928 ATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEE 969
TA+ P+WL EL P ++ + D D + KE K+A+++
Sbjct: 688 VTAIRPEWLIELAPNYYDLDDFDNN--------KEVKSALQK 721
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 615 bits (1585), Expect = e-175, Method: Compositional matrix adjust.
Identities = 302/695 (43%), Positives = 464/695 (66%), Gaps = 41/695 (5%)
Query: 315 LAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNG------ 368
+ E+R+ LP++ +D+ L + NQ +++VGETGSGKTTQ+ Q++L+ N
Sbjct: 58 ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKW 117
Query: 369 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 428
+VGCTQPRRVAAMSV++RV++EMD +G++VGY+IRFED T T++KY+TDG+LLRE +
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAM 177
Query: 429 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 488
D L++Y+VI++DEAHER+L+TDVLFG+LK+V+ R D KL+V SATL A+KF ++F
Sbjct: 178 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSG 237
Query: 489 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACF 548
P+ +PGR PV Y++ P DY+EAA++ + IH+ PPGDIL+F+TG++EIE AC
Sbjct: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDAC- 296
Query: 549 ALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKA----KEGT---RKCIVATN 601
++ + +S+ +V + ++P+YS LP +Q KIF+ A EG RK +V+TN
Sbjct: 297 ---RKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTN 353
Query: 602 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCY 661
IAETSLT+DGI YVID G+ K KVYNP++ +++L V P+S+A+A QR+GRAGRT PG C+
Sbjct: 354 IAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCF 413
Query: 662 RLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQ 721
RLYTE ++ N++ P PEI R+NL N VL LK L ID+L+ FDFMDPP E ++ ++
Sbjct: 414 RLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEV 473
Query: 722 LWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFR 781
L LGAL++ G LT G M EFPLDP ++KML++ + C +E+L++ +MLSVP+ F R
Sbjct: 474 LNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVR 533
Query: 782 PKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRS 841
P++ + +D A+ +F + DHLTLL VY +K++ +WC E++++ ++++ A VR
Sbjct: 534 PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQ 593
Query: 842 QLLDILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLH 897
QL+ I+ + + S+ D+ V +RKA+ + YF A L+ G Y+ ++ HLH
Sbjct: 594 QLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLH 653
Query: 898 PSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHK 957
PS+ L + PE+V+Y+E +LTT+ +++ T + +WL ++ ++ + +
Sbjct: 654 PSNC---LDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNC----- 705
Query: 958 KKQKESKTAMEEEMENLRKIQADEERE-NKAKERE 991
E+K A+E K+ ERE N++K R+
Sbjct: 706 ----EAKRALE-------KLYKKREREKNESKNRK 729
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 609 bits (1570), Expect = e-173, Method: Compositional matrix adjust.
Identities = 297/638 (46%), Positives = 438/638 (68%), Gaps = 16/638 (2%)
Query: 315 LAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNG-IVGCT 373
+ E+R+ LP++ +++ ++VI+ENQVV++VGETGSGKTTQ+ Q++++ G G +VG T
Sbjct: 70 ILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVT 129
Query: 374 QPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDL 433
QPRRVAA+SVAKRVSEEMD ELG++VGY+IRFE+++ T +KY+TDG+LLRE++ D L
Sbjct: 130 QPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTL 189
Query: 434 DKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFH 493
+KY VI++DEAHER+LSTD+LFG++K ++ RR+D KLIV SATL A KF +F + P+
Sbjct: 190 NKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAPLIK 249
Query: 494 IPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKER 553
+PGR PV Y++ +DY+E+AV+ + IH GDIL+F+TG++EIE C ++
Sbjct: 250 VPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRE 309
Query: 554 MEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIF 613
+ R +P + LP+YS LP Q+KIF+ KE RKCIV+TNIAETSLT+DGI
Sbjct: 310 TRE------RGLPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAETSLTIDGIV 361
Query: 614 YVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEM 673
+V+D G+ K K YNP+ +++L V P+S+A+A+QRAGRAGRT PG C+RLYTE A+ M
Sbjct: 362 FVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELM 421
Query: 674 LPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGA 733
+ PEI R+NL +VVL L L + +L+ FDFMDPP + ++ ++ L LGAL++ G
Sbjct: 422 IQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQ 481
Query: 734 LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAR 793
LT++G M EFPLDP L+KML++ + C +E+LTI +MLS P+ F RPKD E+D+A+
Sbjct: 482 LTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRPKDNRIEADSAK 541
Query: 794 EKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIP 853
+ F + DHLT+L VY +K++ WC +++L+ +++++A VRSQL IL K+P
Sbjct: 542 KSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLP 601
Query: 854 LTS----SGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTP 909
L S S ++ ++K I + +F A+ + Y + HPS+ GL P
Sbjct: 602 LVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPST---GLTRRP 658
Query: 910 EYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK 947
E+ +Y+E +LT++ Y++ T V+ WL EL P +F K
Sbjct: 659 EFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQK 696
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 597 bits (1539), Expect = e-169, Method: Compositional matrix adjust.
Identities = 297/646 (45%), Positives = 431/646 (66%), Gaps = 21/646 (3%)
Query: 319 RQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLED--GYTTNGIVGCTQPR 376
R+ LP+ + RDE L++ + NQ++V VGETGSGKTTQ+ Q++L D + N V CTQPR
Sbjct: 90 RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPR 149
Query: 377 RVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKY 436
RVAAMSVA+RV+EEMD +LG++VGY+IRFE+ T T++KYMTDG+LLRE ++D DL +Y
Sbjct: 150 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRY 209
Query: 437 RVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPG 496
I++DEAHER+L+TD+L G+LK+VV RR D K+I+ SATL+A+KF +F P+ +PG
Sbjct: 210 SCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPG 269
Query: 497 RTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQ 556
RT+PV Y+ DY+++A++ + IH T GDIL+F+TG+DEIE A + +Q
Sbjct: 270 RTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQ 329
Query: 557 LISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGT-----RKCIVATNIAETSLTVDG 611
L+ L + P+Y LP Q +IFE A E RK +++TNIAETSLT+DG
Sbjct: 330 LVREEG--CGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDG 387
Query: 612 IFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLN 671
I YV+D G+ K KVYNP++ +++L V P+S+A+A QRAGRAGRT PG C+RLYTE A+
Sbjct: 388 IVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQK 447
Query: 672 EMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNV 731
E++ PEI R+NL + VL LK L ID+L+ FDFMDPP E ++ ++ +L L L++
Sbjct: 448 ELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDE 507
Query: 732 GALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA 791
G LT LG +FPLDP LA ML+ + C E+LTIV+MLSVP+VF RP + +D
Sbjct: 508 GNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADD 567
Query: 792 AREKFFVQESDHLTLLYVYQQWKE---HQYR-GDWCEEHYLHVKSLRKAREVRSQLLDIL 847
A+ F + DH+TLL VY +K ++Y WC +HYL+ +SL A +RSQL ++
Sbjct: 568 AKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLM 627
Query: 848 KTLKIPLTSSGHD----FDVVRKAICSAYFHNAARLK-GVGEYINCRNGMPCHLHPSSAI 902
+ L ++ ++ FD +RKA+ S +F A+ + G YI ++ +HPS+
Sbjct: 628 NRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPSTV- 686
Query: 903 YGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 948
LG+ E+V+Y+E +LT+K Y++ T+V P+WL E+ P ++ + +
Sbjct: 687 --LGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSN 730
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 593 bits (1528), Expect = e-168, Method: Compositional matrix adjust.
Identities = 299/648 (46%), Positives = 433/648 (66%), Gaps = 21/648 (3%)
Query: 315 LAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGI---VG 371
+ ++R LP++ +D ++ +Q V+VGETGSGKTTQ+ Q+ +E + G V
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 372 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 431
CTQPRRVAAMSVA+RV++EMD LG +VGY+IRFED + T++KYMTDG+LLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 432 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 491
L++Y VI++DEAHER+L+TD+L G+LK+VV +R D K+IV SATL+A KF +F + P+
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 492 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-GDILIFMTGQDEIEAACFAL 550
IPGRT PV Y+ P DY+EAA++ + IH+ GD+L+F+TGQ+EI+ AC +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 551 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE----KAKEGT--RKCIVATNIAE 604
K ++ L EV ++ I+P+YS LP Q +IFE K + G RK +V+TNIAE
Sbjct: 370 KREVDDL----GPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAE 425
Query: 605 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLY 664
TSLT+DG+ +VID G+ K KVYNP++ +++L V +S+A+A QRAGRAGRT PG C+RLY
Sbjct: 426 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLY 485
Query: 665 TESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWV 724
TE AY EM + PEI R+NLG+VVL LK L ID+L+ FDFMDPP E ++ ++ L
Sbjct: 486 TEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 545
Query: 725 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 784
L ALN+ G LT+LG M EFPLDP LAKM++ C +EVL+I +MLSVP F RP +
Sbjct: 546 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTE 605
Query: 785 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 844
+ +D A+ +F + DHLTLL VY +K++ WC +++++ +SL A VR QL
Sbjct: 606 AKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLS 665
Query: 845 DILKTLKIPLTS---SGHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 900
I+ +P S + D+ + +RKA+ + YF A L+ G Y+ ++ LHPS+
Sbjct: 666 RIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPST 725
Query: 901 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 948
L + PE+V+Y+E +LTTK Y++ T ++P+WL ++ P ++ + +
Sbjct: 726 V---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 593 bits (1528), Expect = e-168, Method: Compositional matrix adjust.
Identities = 299/648 (46%), Positives = 433/648 (66%), Gaps = 21/648 (3%)
Query: 315 LAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGI---VG 371
+ ++R LP++ +D ++ +Q V+VGETGSGKTTQ+ Q+ +E + G V
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 372 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 431
CTQPRRVAAMSVA+RV++EMD LG +VGY+IRFED + T++KYMTDG+LLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 432 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 491
L++Y VI++DEAHER+L+TD+L G+LK+VV +R D K+IV SATL+A KF +F + P+
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 492 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-GDILIFMTGQDEIEAACFAL 550
IPGRT PV Y+ P DY+EAA++ + IH+ GD+L+F+TGQ+EI+ AC +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 551 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE----KAKEGT--RKCIVATNIAE 604
K ++ L EV ++ I+P+YS LP Q +IFE K + G RK +V+TNIAE
Sbjct: 370 KREVDDL----GPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAE 425
Query: 605 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLY 664
TSLT+DG+ +VID G+ K KVYNP++ +++L V +S+A+A QRAGRAGRT PG C+RLY
Sbjct: 426 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLY 485
Query: 665 TESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWV 724
TE AY EM + PEI R+NLG+VVL LK L ID+L+ FDFMDPP E ++ ++ L
Sbjct: 486 TEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 545
Query: 725 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 784
L ALN+ G LT+LG M EFPLDP LAKM++ C +EVL+I +MLSVP F RP +
Sbjct: 546 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTE 605
Query: 785 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 844
+ +D A+ +F + DHLTLL VY +K++ WC +++++ +SL A VR QL
Sbjct: 606 AKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLS 665
Query: 845 DILKTLKIPLTS---SGHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 900
I+ +P S + D+ + +RKA+ + YF A L+ G Y+ ++ LHPS+
Sbjct: 666 RIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPST 725
Query: 901 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 948
L + PE+V+Y+E +LTTK Y++ T ++P+WL ++ P ++ + +
Sbjct: 726 V---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 592 bits (1527), Expect = e-168, Method: Compositional matrix adjust.
Identities = 299/648 (46%), Positives = 433/648 (66%), Gaps = 21/648 (3%)
Query: 315 LAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGI---VG 371
+ ++R LP++ +D ++ +Q V+VGETGSGKTTQ+ Q+ +E + G V
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 372 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 431
CTQPRRVAAMSVA+RV++EMD LG +VGY+IRFED + T++KYMTDG+LLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 432 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 491
L++Y VI++DEAHER+L+TD+L G+LK+VV +R D K+IV SATL+A KF +F + P+
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 492 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-GDILIFMTGQDEIEAACFAL 550
IPGRT PV Y+ P DY+EAA++ + IH+ GD+L+F+TGQ+EI+ AC +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 551 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE----KAKEGT--RKCIVATNIAE 604
K ++ L EV ++ I+P+YS LP Q +IFE K + G RK +V+TNIAE
Sbjct: 370 KREVDDL----GPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAE 425
Query: 605 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLY 664
TSLT+DG+ +VID G+ K KVYNP++ +++L V +S+A+A QRAGRAGRT PG C+RLY
Sbjct: 426 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLY 485
Query: 665 TESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWV 724
TE AY EM + PEI R+NLG+VVL LK L ID+L+ FDFMDPP E ++ ++ L
Sbjct: 486 TEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 545
Query: 725 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 784
L ALN+ G LT+LG M EFPLDP LAKM++ C +EVL+I +MLSVP F RP +
Sbjct: 546 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTE 605
Query: 785 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 844
+ +D A+ +F + DHLTLL VY +K++ WC +++++ +SL A VR QL
Sbjct: 606 AKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLS 665
Query: 845 DILKTLKIPLTS---SGHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 900
I+ +P S + D+ + +RKA+ + YF A L+ G Y+ ++ LHPS+
Sbjct: 666 RIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPST 725
Query: 901 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 948
L + PE+V+Y+E +LTTK Y++ T ++P+WL ++ P ++ + +
Sbjct: 726 V---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 587 bits (1513), Expect = e-166, Method: Compositional matrix adjust.
Identities = 289/657 (43%), Positives = 436/657 (66%), Gaps = 29/657 (4%)
Query: 317 EQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLE--------DGYTTNG 368
E+R LP++ +++ ++++R NQ + +VGETGSGKTTQ+ Q+ +E
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 369 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 428
+V CTQPRRVAAMSVA RV+EEMD LG +VGY+IRFED T++KY TDG+LLRE +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 429 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 488
LDKY+V+++DEAHER+L+TD+L G++K++V R D K+++ SATL+A KF +F
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 489 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSP-PGDILIFMTGQDEIEAAC 547
P+ +PGRTFPV ++ +DY+EAA++ + IH+ GDIL+F+TGQ+EIE AC
Sbjct: 251 CPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEAC 310
Query: 548 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEG------TRKCIVATN 601
+R+++ I + + L +P+YS LP Q +IFE A +RKC+++TN
Sbjct: 311 ----KRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTN 366
Query: 602 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCY 661
IAETSLT+DG+ +VID G+ K KVYNP++ +++L V P+S+A+A QRAGRAGRT PG C+
Sbjct: 367 IAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCF 426
Query: 662 RLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQ 721
RLYTE+AY +EM PEI R+NLG+VVL LK L ++L+ FDFMDPP E ++ ++
Sbjct: 427 RLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALEL 486
Query: 722 LWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFR 781
L L A+N+ G LT+LG M EFPLDP LAKML+ +L C +E+L+I +MLSVP + R
Sbjct: 487 LNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVR 546
Query: 782 PKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRS 841
P + E+D A+ +F + DHLTLL VY +K++Q WC +++++ ++++ A VR+
Sbjct: 547 PNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRT 606
Query: 842 QLLDILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLH 897
QL ++ + S+ D+ + +RKA+ + +F A L+ G Y+ ++ +LH
Sbjct: 607 QLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLH 666
Query: 898 PSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK---DSDT 951
PS+ L + PE+ +Y+E +LTTK +++ T V P+WL ++ P ++ + D DT
Sbjct: 667 PSTV---LDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDT 720
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 582 bits (1501), Expect = e-165, Method: Compositional matrix adjust.
Identities = 292/644 (45%), Positives = 420/644 (65%), Gaps = 17/644 (2%)
Query: 314 TLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNG-IVGC 372
++ +QRQ LP+F +R+ +L +I Q VV+VGETG GK+TQ+ QYL E G+T G +VG
Sbjct: 46 SIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGV 105
Query: 373 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STLIKYMTDGVLLRETLKDS 431
TQPRRVAA++VA RV+EE LG +VGY IRF+D T +T IK++TDG+L+RE + D
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDP 165
Query: 432 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG---- 487
L KY VI++DEAHER+L TD+ G+LKK+ +R D +LIV SATL+A KF DFF
Sbjct: 166 LLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNET 225
Query: 488 ------SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQD 541
+ I + GRTFPV+ Y ++P DY+++ V+ + IH T GD+L F+TGQ+
Sbjct: 226 SDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQE 285
Query: 542 EIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATN 601
E+E L E+ L + + L +LP+Y+ LP+ Q K+FE+ RK IVATN
Sbjct: 286 EVETVVSMLIEQARALARTGMKR--HLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATN 343
Query: 602 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCY 661
+AETS+T+ GI YVID G+ K++ YNP+ ++ L V PVS+A+A+QRAGR GR+ G CY
Sbjct: 344 VAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCY 403
Query: 662 RLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQ 721
RLYTE A+ +++ S VPE+QR+NL V+L LK+L IDN+L F FM PPP ++++ ++
Sbjct: 404 RLYTEEAF-DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALEL 462
Query: 722 LWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFF 780
L+ LG L+ LT+ LG ++ EFPL+P AKMLL GC E+L+I +M+ + ++F
Sbjct: 463 LYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFV 522
Query: 781 RPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVR 840
P ++ + KF V+E DHLT+L +Y+ + +H WC+EH+L+ K L +A VR
Sbjct: 523 VPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVR 582
Query: 841 SQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 900
QL +L ++P SS D D+V + I S +F NAAR G Y R+ H+HP+S
Sbjct: 583 EQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPAS 642
Query: 901 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 944
+Y P +V+Y+E+I T+K YM+ TA+E WL EL P F+
Sbjct: 643 VLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 294/644 (45%), Positives = 420/644 (65%), Gaps = 17/644 (2%)
Query: 314 TLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNG-IVGC 372
++ +QRQ LP+F +R+ +L +I Q VV+VGETG GK+TQ+ QYL E G+T G +VG
Sbjct: 46 SIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGV 105
Query: 373 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STLIKYMTDGVLLRETLKDS 431
TQPRRVAA++VA RV+EE LG +VGY IRF+D T +T IK++TDG+L+RE + D
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDP 165
Query: 432 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG---- 487
L KY VI++DEAHER+L TD+ G+LKK+ +R D +LIV SATL+A KF DFF
Sbjct: 166 LLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNET 225
Query: 488 ------SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQD 541
+ I + GRTFPV+ Y ++P DY+++ V+ + IH T GDIL F+TGQ+
Sbjct: 226 SDPARDTCVILTVGGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQE 285
Query: 542 EIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATN 601
E+E L E+ L + + L +LP+Y+ LP+ Q K+FE+ RK IVATN
Sbjct: 286 EVETVVSMLIEQARALARTGMKR--HLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATN 343
Query: 602 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCY 661
+AETS+T+ GI YVID G+ K++ YNP+ ++ L V PVS+A+A+QRAGR GR+ G CY
Sbjct: 344 VAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCY 403
Query: 662 RLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQ 721
RLYTE A+ +++ S VPE+QR+NL V+L LK+L IDN+L F FM PPP ++++ ++
Sbjct: 404 RLYTEEAF-DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALEL 462
Query: 722 LWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFF 780
L+ LG L+ LT+ LG ++ EFPL+P AKMLL GC E+L+I +M+ + ++F
Sbjct: 463 LYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFV 522
Query: 781 RPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVR 840
P ++ ++ KF V+E DHLT+L VY+ + +H WC+EH+L+ K L +A VR
Sbjct: 523 VPPNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVR 582
Query: 841 SQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 900
QL +L ++P SS D D V + I S +F NAAR G Y R+ H+HP+S
Sbjct: 583 EQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPAS 642
Query: 901 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 944
+Y P +V+Y+E+I T+K YM+ TA+E WL EL P F+
Sbjct: 643 VLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 556 bits (1432), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/742 (41%), Positives = 446/742 (60%), Gaps = 52/742 (7%)
Query: 244 KQTQNKSRQRFWE---LAGSQMG--------NILGVKKTAEQVDADTAVVGEQGEIDFRE 292
K+ +RQR WE L + G + G K D D + E D
Sbjct: 133 KEIDKINRQRMWEEQQLRNAMAGQSDHPDDITLEGSDKYDYVFDTDAMIDYTNEEDDLLP 192
Query: 293 DAKFSQHMKKGEAV-SDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGK 351
+ K + +A+ ++ + T+ E R+ LP+ +DELLQ I++NQV++++GETGSGK
Sbjct: 193 EEKLQYEARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGK 252
Query: 352 TTQLTQYLLEDGYTTNGI--VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVT 409
TTQL QYL+EDG+T G + TQPRRVAA SVA RV++EM+ LG +VGY IRFED T
Sbjct: 253 TTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKT 312
Query: 410 GPS-TLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDF 468
P+ T++KYMTDG+LLRE L DS L KY I++DEAHER+L+TD+L G+LK ++ +R
Sbjct: 313 TPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTL 372
Query: 469 KLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHIT- 527
KL+++SAT+NA+KFS+FF + PIF++PGR +PV+ Y+ P +Y+ AA+ IH T
Sbjct: 373 KLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQ 432
Query: 528 SPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE 587
S PGDIL+F+TGQ+EIE K ++E+++S +++I PIY+ LP + Q KIF+
Sbjct: 433 SLPGDILVFLTGQEEIERT----KTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQ 488
Query: 588 KAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQ 647
E RK ++ATNIAETSLT+DGI YVID G+ K Y P GM L P SRA+ DQ
Sbjct: 489 PTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQ 548
Query: 648 RAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFM 707
RAGRAGR GPG C+R++T+ +YL+E+ P PEI RTNL N VLLL SL + +L+ F M
Sbjct: 549 RAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLM 608
Query: 708 DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMG---EQL-GCL 763
D P + S+ L++LGALN+ G +T LG M EFP +P AK+L EQ G L
Sbjct: 609 DKPSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVL 668
Query: 764 DEVLTIVSML-SVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDW 822
+E LTIVSML PS+F ++ DAA ESDH+ L ++ QW+ ++ W
Sbjct: 669 EECLTIVSMLHETPSLFI-----GQKRDAAASVLSEVESDHILYLEIFNQWRNSKFSRSW 723
Query: 823 CEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTS------------SGHDFDVVRKAICS 870
C++H + K++ + R +R+QL + K+ L +G+ + + S
Sbjct: 724 CQDHKIQFKTMLRVRNIRNQLFRC--SEKVGLVEKNDQARMKIGNIAGYINARITRCFIS 781
Query: 871 AYFHNAARLKGVGEYINCRN--GMPCHLHPSSAIY-----GLGYTPEYVVYHELILTTKE 923
+ N +L G R+ G+ +HP+S ++ +YV+Y +L+LT+KE
Sbjct: 782 GFPMNIVQLGPTGYQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKE 841
Query: 924 YMQ-CATAVEPQWLSELGPMFF 944
+++ C + +WL ++ P F
Sbjct: 842 FIRDCLVIPKEEWLIDMVPQIF 863
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 544 bits (1401), Expect = e-153, Method: Compositional matrix adjust.
Identities = 286/641 (44%), Positives = 399/641 (62%), Gaps = 20/641 (3%)
Query: 318 QRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRR 377
QR+ LPIF R +LL +R V++GETGSGKTTQ+ QYL E G + GI+ TQPRR
Sbjct: 70 QRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRR 129
Query: 378 VAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYR 437
VAA+S+A RVS+E TELG VGY +RF+DVT T IK++TDG+LLRE + DS L KY
Sbjct: 130 VAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYS 189
Query: 438 VIVMDEAHERSLSTDVLFGILKKVVARRRD-----FKLIVTSATLNAQKFSDFFGSVPIF 492
+++DEAHER++ TDVLFG++K RR++ K+IV SAT++ FS +F P+
Sbjct: 190 CVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVL 249
Query: 493 HIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPG-DILIFMTGQDEIEAACFALK 551
++ GR P+ Y+K P DY+ AA+ IH +P DIL+F+TGQ+EIEA +
Sbjct: 250 YLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCR 309
Query: 552 ERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDG 611
+ + L P +L+LP+Y+ LP Q ++F+ A +G RK I++TNIAETS+T+ G
Sbjct: 310 DIAKHLPDG----CPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITG 365
Query: 612 IFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAY-- 669
I YV+DTG K K YNP G++ L V VS+ A QR GRAGR G CYRLYTE +
Sbjct: 366 IKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK 425
Query: 670 LNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGAL- 728
++M VPEIQR NL +V+L L ++K+ N+L FDFM P ++I ++ QL +LGAL
Sbjct: 426 FDKMT---VPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALE 482
Query: 729 --NNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRA 786
++ LT +G KM FPL+P AK +LM + C +E+LTIVS+LSV SV P R
Sbjct: 483 HKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRR 542
Query: 787 EESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDI 846
EE R+KF E DH+TLL +Y+ +K DWC+E++++ K++ EVR+QL DI
Sbjct: 543 EEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDI 602
Query: 847 LKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLG 906
+ +P+ SS D + VR+ + + F + A L+ G Y P +HPSS ++
Sbjct: 603 CLKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHC- 661
Query: 907 YTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK 947
P VVY EL+ T K YM+ ++ QWL E P +F K
Sbjct: 662 -KPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFRRK 701
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 541 bits (1394), Expect = e-152, Method: Compositional matrix adjust.
Identities = 284/644 (44%), Positives = 400/644 (62%), Gaps = 16/644 (2%)
Query: 313 KTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGC 372
+ L QR+ LPIF R +LL +R V++GETGSGKTTQ+ QYL E G + GI+
Sbjct: 56 EALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAV 115
Query: 373 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSD 432
TQPRRVAA+S+A RVS+E TELG VGY +RFEDVT T IK++TDG+LLRE + DS
Sbjct: 116 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSL 175
Query: 433 LDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRD-----FKLIVTSATLNAQKFSDFFG 487
L KY +++DEAHER++ TDVLFG++K RR++ K+IV SAT++ FS +F
Sbjct: 176 LRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFN 235
Query: 488 SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPG-DILIFMTGQDEIEAA 546
P+ ++ GR P+ Y+K P +DY+ AA+ IH +P DIL+F+TGQ+EIEA
Sbjct: 236 RAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAM 295
Query: 547 CFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 606
++ L P +L+LP+Y+ LP Q ++F+ A +G RK I++TNIAETS
Sbjct: 296 SKTCRDIARHLPDG----CPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETS 351
Query: 607 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTE 666
+T+ GI YV+DTG K K YNP G++ L V VS+ A QR GRAGR G CYRLYTE
Sbjct: 352 ITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTE 411
Query: 667 SAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLG 726
+ + VPEIQR NL +V+L L ++K+ N+L FDFM P ++I ++ QL +LG
Sbjct: 412 DEF-EKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLG 470
Query: 727 AL---NNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPK 783
AL ++ LT +G KM FPL+P AK +L+ + C +E+LTIVS+LSV SV + P
Sbjct: 471 ALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPP 530
Query: 784 DRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQL 843
R +E + R+KF E DH+TLL +Y+ +K DWC+E++++ K++ EVR+QL
Sbjct: 531 ARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQL 590
Query: 844 LDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIY 903
+I + +P+ SS D + VR+ + + F N A L+ G Y P +HPSS ++
Sbjct: 591 REICLKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLF 650
Query: 904 GLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK 947
P VVY L+ T K YM+ V+ +WL E P +F K
Sbjct: 651 HC--KPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFRRK 692
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 529 bits (1362), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/639 (41%), Positives = 411/639 (64%), Gaps = 10/639 (1%)
Query: 310 AKSKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGI 369
+K K + EQR+ LPI+ D L Q I++N+V+VVVGETGSGK+TQ+ Q+L E Y G
Sbjct: 84 SKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGC 143
Query: 370 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 429
V TQPRRVAA+++AKRV+ E LG++VGY+IRF+D T T IKY+TDG+LLRE +
Sbjct: 144 VAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELIN 203
Query: 430 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSV 489
D L +Y +++DEAHER+L TD+L G +KK++ +R ++I+ SATLNA++FS+FF
Sbjct: 204 DPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGA 263
Query: 490 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFA 549
I +I GR +PV Y+ TP DY++A ++ +H PPGDIL+F+TGQDEIEA
Sbjct: 264 EICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEAL 323
Query: 550 LKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTV 609
+K +QL S+ +P++ P+++ LP + Q ++F A RK +++TNIAETS+T+
Sbjct: 324 IKSYSKQLPSN----LPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTI 379
Query: 610 DGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAY 669
GI YVIDTG K+K +N K+G+++L V P+S++AA QR+GRAGR G CYR+YTE+ +
Sbjct: 380 SGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF 439
Query: 670 LNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALN 729
+++ +PEI+R +L VL LK+ +++++F +MDPP +E +L ++ L+ +GAL+
Sbjct: 440 -DKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALD 498
Query: 730 NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEES 789
+ G + DLG++M PL P LA+ +L + CL EV+ +VS LS S+F P+++ +E+
Sbjct: 499 DNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEA 558
Query: 790 DAAREKFFVQESDHLTLLYVYQQWKE--HQYRGDWCEEHYLHVKSLRKAREVRSQLLDIL 847
AR KF E D LT L +Q+ E H R WC +++++ ++L+ ++R QL +
Sbjct: 559 IEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHC 618
Query: 848 KTLKIPLTSSGH-DFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLG 906
L SS + + + + S Y N A L G Y +HPSS+++ G
Sbjct: 619 LKDGWELNSSPEVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLF--G 676
Query: 907 YTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFS 945
E ++YHEL+ TTK Y++ +++ WL+ + P + +
Sbjct: 677 KKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHYLA 715
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 285/721 (39%), Positives = 433/721 (60%), Gaps = 50/721 (6%)
Query: 322 LPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 381
PI R +L+Q +R+N ++V G TGSGKTTQL +YL E G++ +G++G TQPR+VAA+
Sbjct: 53 FPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAI 112
Query: 382 SVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVM 441
SVA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L D +L+K+ VI++
Sbjct: 113 SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIIL 172
Query: 442 DEAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPG 496
DEAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S FFG+ PIF IPG
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 497 RTFPVNTLYSKT------PCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAAC--- 547
R +PV + Y++A VK M IH+ GDIL+F+TGQ EIE +C
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
Query: 548 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSL 607
F + E ++ + LLILP Y + D Q +IF G RKC+++TNI+ TSL
Sbjct: 293 FQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSL 352
Query: 608 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTES 667
T+DGI YV+D G+ K +NP++G+D L+V P+S++ A QR+GRAGRT G C+R+Y++
Sbjct: 353 TIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKD 412
Query: 668 AYLNEMLPSPV-PEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLG 726
+ N+ +P V PEI+RT+L +VVL LK L I +++ F ++DPP + IL ++ QL+
Sbjct: 413 -FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 727 ALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD-- 784
A++ G +T LG MVEFPL P L ++ L C D +L I +MLSV +VF RP D
Sbjct: 472 AIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPE 531
Query: 785 ---RAEESD---AAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKARE 838
AE+ AA+ F +D TL +++Q K WC++H++H + L A
Sbjct: 532 YQKEAEQKHRELAAKAGGF---NDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFR 588
Query: 839 VRSQLLDILKTLK----IPL-TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGM- 892
V +QL ++++ LK P T G +V+R+ +C+ YF N AR + VG +G
Sbjct: 589 VEAQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVAR-RSVGRTFCTMDGRG 647
Query: 893 -PCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDT 951
P H+HPSSA++ E++++HE+++TTK Y + + +W+ +L P + D
Sbjct: 648 SPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDL 707
Query: 952 SMLE-------------HKKKQKESKTAMEEEMENLRKIQADEERENKAKEREKRVKERQ 998
S + +K+ K+ K + +E+ L+K+Q + ++ + R + ++ +Q
Sbjct: 708 SSVARREMRDDARRKWTNKENVKQLKDGISKEV--LKKMQRRNDDKSISDARARFLERKQ 765
Query: 999 Q 999
Q
Sbjct: 766 Q 766
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/703 (39%), Positives = 426/703 (60%), Gaps = 33/703 (4%)
Query: 322 LPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 381
PI R +L+Q +R+N ++V G TGSGKTTQL +YL E G++ +G++G TQPR+VAA+
Sbjct: 53 FPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAI 112
Query: 382 SVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVM 441
SVA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L D +L K+ VI++
Sbjct: 113 SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIIL 172
Query: 442 DEAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPG 496
DEAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S FFG+ PIF IPG
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 497 RTFPVNTLYSKT------PCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAAC--- 547
R +PV + Y++A VK M IH+ GDIL+F+TGQ EIE +C
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
Query: 548 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSL 607
F + E ++ + LLILP Y + D Q +IF G RKC+++TNI+ TSL
Sbjct: 293 FQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSL 352
Query: 608 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTES 667
T+DGI YV+D G+ K +NP++G+D L+V P+S++ A QR+GRAGRT G C+R+Y++
Sbjct: 353 TIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKE 412
Query: 668 AYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGA 727
+ M +PEI+RT+L +VVL LK L I +++ F ++DPP + IL ++ QL+ A
Sbjct: 413 FWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDA 472
Query: 728 LNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 787
++ G +T LG MVEFPL P L ++ L C D +L I +MLSV +VF RP D
Sbjct: 473 IDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEY 532
Query: 788 ESDA-AREKFFVQES----DHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQ 842
+ +A R + ++ D TL +++Q K WC++H++H + L A V +Q
Sbjct: 533 QKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQ 592
Query: 843 LLDILKTLK----IPL-TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGM--PCH 895
L ++++ LK P T G +V+R+ +C+ YF N AR + VG +G P H
Sbjct: 593 LRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVH 651
Query: 896 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLE 955
+HPSSA++ E++++HE+++TTK Y + + +W+ +L P + D S +
Sbjct: 652 IHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVA 711
Query: 956 HKKKQKESKTAMEEEMENLRKIQADEERENKAKEREKRVKERQ 998
++ +++++ + EN++++ ++ +KE K+++ R
Sbjct: 712 RREMREDARRKWTNK-ENVKQL-----KDGISKEVLKKMQRRN 748
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust.
Identities = 274/684 (40%), Positives = 419/684 (61%), Gaps = 30/684 (4%)
Query: 322 LPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 381
PI R +++Q +R+N ++V G TGSGKTTQL +YL E G++ +G++G TQPR+VAA+
Sbjct: 53 FPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAI 112
Query: 382 SVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVM 441
SVA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L D +L K+ VI++
Sbjct: 113 SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIIL 172
Query: 442 DEAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPG 496
DEAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S FFG+ PIF IPG
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 497 RTFPVNTLYSKT------PCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAAC--- 547
R +PV + Y++A VK M IH+ GDIL+F+TGQ EIE +C
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
Query: 548 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSL 607
F + E ++ + LLILP Y + D Q +IF G RKC+++TNI+ TSL
Sbjct: 293 FQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSL 352
Query: 608 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTES 667
T+DGI YV+D G+ K +NP++G+D L+V P+S++ A QR+GRAGRT G C+R+Y++
Sbjct: 353 TIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKD 412
Query: 668 AYLNEMLPSPV-PEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLG 726
+ N+ +P V PEI+RT+L +VVL LK L I +++ F ++DPP + IL ++ QL+
Sbjct: 413 -FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 727 ALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRA 786
A++ G +T LG MVEFPL P L ++ L C D +L I +MLSV +VF RP D
Sbjct: 472 AIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPE 531
Query: 787 EESDA-AREKFFVQES----DHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRS 841
+ +A R + ++ D TL +++Q K WC++H++H + L A V +
Sbjct: 532 YQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEA 591
Query: 842 QLLDILKTLK----IPL-TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGM--PC 894
QL ++++ LK P T G +V+R+ +C+ YF N AR + VG +G P
Sbjct: 592 QLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPV 650
Query: 895 HLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSML 954
H+HPSSA++ E++V+HE+++TTK Y + + +W+ +L P D S +
Sbjct: 651 HIHPSSALHEQETKLEWIVFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSV 710
Query: 955 EHKKKQKESKTAMEEEMENLRKIQ 978
++ +++++ + EN+++++
Sbjct: 711 ARREVREDARRRWTNK-ENVKQLK 733
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 273/684 (39%), Positives = 419/684 (61%), Gaps = 30/684 (4%)
Query: 322 LPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 381
PI R +++Q +R+N ++V G TGSGKTTQL +YL E G++ +G++G TQPR+VAA+
Sbjct: 53 FPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAI 112
Query: 382 SVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVM 441
SVA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L D +L K+ VI++
Sbjct: 113 SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIIL 172
Query: 442 DEAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPG 496
DEAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S FFG+ PIF IPG
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 497 RTFPVNTLYSKT------PCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAAC--- 547
R +PV + Y++A VK M IH+ GDIL+F+TGQ EIE +C
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
Query: 548 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSL 607
F + E ++ + LLILP Y + D Q +IF G RKC+++TNI+ TSL
Sbjct: 293 FQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSL 352
Query: 608 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTES 667
T+DGI YV+D G+ K +NP++G+D L+V P+S++ A QR+GRAGRT G C+R+Y++
Sbjct: 353 TIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKD 412
Query: 668 AYLNEMLPSPV-PEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLG 726
+ N+ +P V PEI+RT+L +VVL LK L I +++ F ++DPP + IL ++ QL+
Sbjct: 413 -FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 727 ALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRA 786
A++ G +T LG MVEFPL P L ++ L C D +L I +MLSV +VF RP D
Sbjct: 472 AIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPE 531
Query: 787 EESDA-AREKFFVQES----DHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRS 841
+ +A R + ++ D TL +++Q K WC++H++H + L A V +
Sbjct: 532 YQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEA 591
Query: 842 QLLDILKTLK----IPL-TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGM--PC 894
QL ++++ LK P T G +V+R+ +C+ YF N AR + VG +G P
Sbjct: 592 QLRELIRKLKQQSDFPKETFEGPKHEVLRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPV 650
Query: 895 HLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSML 954
H+HPSSA++ E++++HE+++TTK Y + + +W+ +L P D S +
Sbjct: 651 HIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSV 710
Query: 955 EHKKKQKESKTAMEEEMENLRKIQ 978
++ +++++ + EN+++++
Sbjct: 711 ARREVREDARRRWTNK-ENVKQLK 733
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/648 (40%), Positives = 399/648 (61%), Gaps = 24/648 (3%)
Query: 312 SKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNG-IV 370
S + +QR LPIF R +L + + +++VGETG GK+TQ+ Q+LLE G+ +G +
Sbjct: 67 SLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQI 126
Query: 371 GCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 430
TQPRRVA +++A RV+EE D LG VGY +RF+DV+ T +K+MTDG+LLRE L D
Sbjct: 127 VITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILAD 186
Query: 431 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFF---- 486
L KY +I++DEAHERS +TD+L G+L+K++ R D ++IV+SATL+A+ F DFF
Sbjct: 187 PLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNE 246
Query: 487 ------GSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQ 540
+ I + GRT PV ++KT DY ++AV + IH PGDIL+F+TGQ
Sbjct: 247 TGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQ 306
Query: 541 DEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVAT 600
DE+E C L+E ++ + L ++P Y LPA Q K F+ GTRK +VAT
Sbjct: 307 DEVEDVCEKLRE-----LAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVAT 361
Query: 601 NIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTC 660
NIAE S+T+ GI YVIDTGY K++ + G++ L VS+A+A+QRAGRAGR PG C
Sbjct: 362 NIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKC 421
Query: 661 YRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMY 720
YRLY ES + VPEIQR + + +L LK+L + N+ F ++ PPP ++N +
Sbjct: 422 YRLYPESEF-ERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLE 480
Query: 721 QLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 779
L+ LGA++ LT LG +M EFPL P +K LL + GC E++TIV+M+ + VF
Sbjct: 481 LLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVF 540
Query: 780 FRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREV 839
P + ++D R+KF V+E DH+T+L V+ ++ E+ WC +H+++ + L +A V
Sbjct: 541 ITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNV 600
Query: 840 RSQLLDILKTLKIPLTSSGHDFDV---VRKAICSAYFHNAARLKGVGEYINCRNGMPCHL 896
RSQL+ +LK +I SS + +R+ + + +F AA+ G+Y+ + P ++
Sbjct: 601 RSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNM 660
Query: 897 HPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 944
+ S+I P++V++ E++ ++ ++ T +EP+WL EL P ++
Sbjct: 661 YKGSSIMFKKDYPKWVIFTEVM---QDSIRDVTVIEPEWLYELAPHYY 705
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/632 (38%), Positives = 388/632 (61%), Gaps = 20/632 (3%)
Query: 315 LAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTT-NGIVGCT 373
L Q++ LPI R++LL + +NQ+ +V+G TG GKTTQ+ Q+L E G+ + NGI+GCT
Sbjct: 18 LNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCT 77
Query: 374 QPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDL 433
QPRR+ A SV++RVS E+++ G GY+I+F+ T IKYMTDG+LL E D L
Sbjct: 78 QPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLL 137
Query: 434 DKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS--VPI 491
++Y ++++DE HER+LSTD+L G+LK+++ +R DF+L+++SA+++A K S FFG V
Sbjct: 138 ERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCT 197
Query: 492 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 551
I G+ FPV TL+ + P E+YV++A++ + I+ T PPGDIL+F++G+ EIE + +K
Sbjct: 198 MSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIE---YCIK 254
Query: 552 ERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDG 611
+ + LI + + + L+ LP+++ L D Q ++F RK I +TNIAETS+T+DG
Sbjct: 255 KIEDSLIHA-SEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDG 313
Query: 612 IFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLN 671
I YV+D+G+ K ++YNP L P+S+++A QR+GRAGRT G +RLYTE AY +
Sbjct: 314 IVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAY-S 372
Query: 672 EMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNV 731
M +I ++ +VL LK L + N+L F F PP +++ ++ L++LG L+
Sbjct: 373 LMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDES 432
Query: 732 GALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE-ES 789
G LTD LG ++ LD ++K LL Q GC E+L+I S+L+ VF+ P ++ ++
Sbjct: 433 GNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSKNDA 492
Query: 790 DAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKT 849
A FF E D +T L V++ + ++ WC ++YL+ ++LR+A ++R+ L+ L
Sbjct: 493 FVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNK 552
Query: 850 LKIP----LTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGL 905
IP L SS D + K + + N A L+ G Y G L SS ++
Sbjct: 553 FSIPTAQRLPSS--DCSKILKCLLDGFVRNVAHLQNDGSY-KTIGGKQVWLDSSSVLHE- 608
Query: 906 GYTPEYVVYHELILT-TKEYMQCATAVEPQWL 936
TP +++Y + + T+ +++ + +E WL
Sbjct: 609 KKTP-WIMYSSAVESETQIFVKNISKIESFWL 639
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/453 (47%), Positives = 306/453 (67%), Gaps = 11/453 (2%)
Query: 415 IKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTS 474
IKYMTDG+LLRE + D L++Y VI++DEAHER+++TD+L G+LK+V +R D KL+V S
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMS 60
Query: 475 ATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSP-PGDI 533
ATL+A KF +F + P+ +PGRT PV Y+ P DY+EAA++ + IH+ GD+
Sbjct: 61 ATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 120
Query: 534 LIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGT 593
L+F+TGQ+EIE AC +R+++ + + EV +L +P+YS LP +Q +IFE A
Sbjct: 121 LLFLTGQEEIEEAC----KRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPPNK 176
Query: 594 ------RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQ 647
RK +V+TNIAETSLT+DG+ +VID G+ K KVYNP++ +++L V P+S+A+A Q
Sbjct: 177 ANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQ 236
Query: 648 RAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFM 707
R GRAGRT PG C+RLYTE AY +EM + PEI R+NLG VVL LK L ID+L+ FDFM
Sbjct: 237 RVGRAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFM 296
Query: 708 DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVL 767
DPP E ++ ++ L LGAL++ G LT LG M EFPLDP LAKM++ C +E+L
Sbjct: 297 DPPAPETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTDYSCSNEIL 356
Query: 768 TIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHY 827
++ +MLSVP F RP + + +D A+ +F + DHLTLL VY +K++ WC +++
Sbjct: 357 SVTAMLSVPQCFLRPNEAKKLADEAKMRFAHIDGDHLTLLNVYHAFKQNNEDPQWCYDNF 416
Query: 828 LHVKSLRKAREVRSQLLDILKTLKIPLTSSGHD 860
+ +SL+ A VR QL I+ + TS+ +
Sbjct: 417 IQYRSLKSADSVRQQLARIMDRFALQRTSTNFN 449
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 244/660 (36%), Positives = 383/660 (58%), Gaps = 39/660 (5%)
Query: 310 AKSKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTT--N 367
+++ L + R+ LP++ + E++ I N V V++GETGSGK+TQ+ Q++LE Y T +
Sbjct: 69 SRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKH 128
Query: 368 GIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRET 427
G + TQPRRVAA+++A RV++E +LG++VGY++RF++ T T +KY+TDG+LLRE
Sbjct: 129 GSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLREL 188
Query: 428 LKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVV-ARRRDFKLIVTSATLNAQKFSDFF 486
+ +SDL +Y VIV+DEAHER++ TD++ G LK ++ R D ++IV SATL A+KFS+FF
Sbjct: 189 MMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFF 248
Query: 487 GSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAA 546
+ PI + GR F V Y K P +D V+A ++ + I+ GDIL F+ GQ+EI+ A
Sbjct: 249 NNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKA 308
Query: 547 CFALKERMEQLISSTTREVPELLIL--PIYSQLPADLQAKIFEKAKEGTRKCIVATNIAE 604
ME++ + E P LI+ P+Y+ LPA Q+ +F K RK + +TNIAE
Sbjct: 309 VTI----MEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAE 364
Query: 605 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLY 664
TS+T+ G+ +V+D+G K+KV+ ++G+ L P+S+A+A QR+GRAGR G +RLY
Sbjct: 365 TSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLY 424
Query: 665 TESAYLNEMLPSPV-PEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLW 723
ES Y+ LP PEI R+++ + VL+LK +D+LL++ + + P +E I+ + +L+
Sbjct: 425 CESDYVK--LPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELY 482
Query: 724 VLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPK 783
LGAL+ G +T G +M PL P L+ +L+ ++GCL +V+ IVS LSV ++ P
Sbjct: 483 ELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPS 542
Query: 784 DRAEESDAAREKFFV------QESDHLTL-----LYVYQQWKEHQY---RGDWCEEHYLH 829
EE D E+ + D + L +Y Y+ K R DWC+ +
Sbjct: 543 --PEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCIS 600
Query: 830 VKSLRKAREVRSQLLDILKTL-------KIPLTSSGHDFDVVRKAI-C--SAYFHNAARL 879
++ + VR QL K L G D +++ K + C + + N A
Sbjct: 601 IRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISKILKCFLTGFIKNTAIG 660
Query: 880 KGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSEL 939
Y G P +HPSS ++ P ++Y E + TTK Y + + +E WL E+
Sbjct: 661 MPDRSYRTVSTGEPISIHPSSMLFMNKSCPG-IMYTEYVFTTKGYARNVSRIELSWLQEV 719
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/637 (37%), Positives = 370/637 (58%), Gaps = 35/637 (5%)
Query: 322 LPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 381
LP+ + E+ ++I E+QV+VV GETGSGKTTQL + LE G+ G++G TQPRR+AA
Sbjct: 83 LPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIAAR 142
Query: 382 SVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVM 441
SVA R++EE++TELG VGY +RF D +T IK MTDG+LL E D L++Y +++
Sbjct: 143 SVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSCLII 202
Query: 442 DEAHERSLSTDVLFGILKKVVA-RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFP 500
DEAHERSL+ D + G LK+++ RRRD KLI+TSAT++ ++FS F + PI + GRT+P
Sbjct: 203 DEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPIIEVSGRTYP 262
Query: 501 VNTLYSKTPCEDYVE--AAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLI 558
V Y ED + + A+ GDILIFM G+ EI AL+ +Q +
Sbjct: 263 VEVRYRPVVEEDDQDQLQGILNAVDELQAEGRGDILIFMNGEREIRDTAEALQ---KQNL 319
Query: 559 SSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDT 618
T ILP++++L A Q KIF + G + ++ATN+AETSLTV I YVID
Sbjct: 320 KHTE-------ILPLFARLSAQEQNKIFHPS--GLNRIVLATNVAETSLTVPSIKYVIDP 370
Query: 619 GYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPV 678
G ++ Y+ + + L + P+S+A+A+QR GR GR G C RLY+E + N
Sbjct: 371 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDF-NSRPEFTD 429
Query: 679 PEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGA----- 733
PEI RTNL +V+L + +L +D++ F F+D P + +I + + L LGA V
Sbjct: 430 PEILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEELGAFETVQTKSGEK 489
Query: 734 --LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA 791
LT +G ++ + P+DP LAKM+L GC+ E++ IVS LS+ RP+++ + SD
Sbjct: 490 RLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRERPQEKQQASDE 549
Query: 792 AREKFFVQESDHLTLL----YVYQQWKE---HQYRGDWCEEHYLHVKSLRKAREVRSQLL 844
+F ++SD L L Y+ +Q KE +Q+R C++ +L+ +R+ +++ Q+
Sbjct: 550 KHRRFADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQ-CQKDFLNYLRIREWQDIYHQIR 608
Query: 845 DILKTLKIPLTSSGHDFDVVRKAICSAYF-HNAARLKGVGEYINCRNGMPCHLHPSSAIY 903
++ + +P+ S ++ + A+ S H + +Y+ RN + P+S ++
Sbjct: 609 LTVREMSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGARNAH-FAIFPNSVLF 667
Query: 904 GLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELG 940
P++V+ EL+ T+K + + +EP+W+ L
Sbjct: 668 --KKQPKWVMAAELVETSKLWGRMVAEIEPEWIEPLA 702
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAPB1A10.06c PE=3
SV=1
Length = 1183
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 260/740 (35%), Positives = 381/740 (51%), Gaps = 125/740 (16%)
Query: 315 LAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTN-----GI 369
+ E R LPI + +++ I N VV++ G TGSGKTTQL Q+L E G+++ G+
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 370 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 429
+ TQPRRVAA+S+AKRVSEE+ T KV Y IRF+ P T IK+MTDG+LLRE
Sbjct: 451 IAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSS 509
Query: 430 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRD----------FKLIVTSATLNA 479
D L Y +++DEAHERS++TD+L G+L ++V RR+ KLI+ SATL
Sbjct: 510 DFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRV 569
Query: 480 QKFSD----FFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILI 535
FS+ F PI I R +PV+ +++T DY++ A + IH P G IL+
Sbjct: 570 TDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILV 629
Query: 536 FMTGQDEIEAACFALKERM------------------------EQLISST--TREVPE-- 567
F+TGQ E+E C L++R E L S T +VP
Sbjct: 630 FLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPTSS 689
Query: 568 ------------LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYV 615
+ +LP+YS L + Q K+F+ + EG R CIVATN+AETS+T+ I YV
Sbjct: 690 SSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYV 749
Query: 616 IDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLP 675
+D G K +VYN K + +V +S+A ADQRAGRAGRTGPG CYRLY+ + + +
Sbjct: 750 VDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPL 809
Query: 676 SPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALT 735
+PEI RT + ++VL +K++ IDN+ +F F P + + S+ L LGA+++ G LT
Sbjct: 810 HSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLT 869
Query: 736 DLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPK----------DR 785
LG +M FPL P +KML++G+Q GCL V+ +VS LS+ +F + R
Sbjct: 870 KLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLLYDAHDKNSR 929
Query: 786 AEESDAAREKFFVQESDH-----------------------LTLLYVYQQWKEHQYRGDW 822
+EE+D + Q+ ++ L+LL + + +
Sbjct: 930 SEETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAYDYASDKRKF 989
Query: 823 CEEHYLHVKSLRKAREVRSQLLDILKTLKI------------PLTSSGHDFDVVRKAICS 870
C+E+YL K+L + +R Q++ +LK + P TS +R+ I S
Sbjct: 990 CKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQLKPPTSV--QIKALRQFIAS 1047
Query: 871 AYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTP--------EYVVYHEL--ILT 920
AY + V Y + G L PS + + + P EYVVY L +
Sbjct: 1048 AY------IDQVALYDKEKRGY-VTLFPSGSEV-VQFVPDRTYNIDSEYVVYLSLHESRS 1099
Query: 921 TKEYMQCATAVEPQWLSELG 940
+ YM T + P+ L+ L
Sbjct: 1100 GRVYMSPLTEISPEHLARLA 1119
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 323/556 (58%), Gaps = 28/556 (5%)
Query: 309 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNG 368
F + L +R LPI + +LQ ++E+QVVVV G+TG GK+TQ+ QYLL G++
Sbjct: 149 FGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH-- 206
Query: 369 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 428
V CTQPRR+A +S+AKRV E ++ G +VGY IRFE +T I ++T G+LLR+
Sbjct: 207 -VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQ 265
Query: 429 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 488
++ L +Y V+++DE HER L D L G+L++++ R D K+I+ SAT+N FS +F +
Sbjct: 266 REPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSN 325
Query: 489 VPIFHIPGRTFPVNTLYSKTPCEDYVEAA--------VKQAMTIHITSPP---GDILIFM 537
P+ +PGR FP+ +Y E + ++ +I PP GD+L+F+
Sbjct: 326 APVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDLLVFL 385
Query: 538 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 597
+G EI A E + S T R V +LP++S L Q K+F+ A G RKCI
Sbjct: 386 SGMAEISAVL----EAAQTYASHTQRWV----VLPLHSALSVADQDKVFDVAPPGVRKCI 437
Query: 598 VATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGP 657
++TNIAETS+T+DGI +V+D+G K Y+P+ + LQ F +S+A+A+QR GRAGRTGP
Sbjct: 438 LSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGP 497
Query: 658 GTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILN 717
G C+RLY ES Y + P PVPEI+R L ++VL +KS+ + + F F++PPP ++
Sbjct: 498 GVCFRLYAESDY-DAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLET 556
Query: 718 SMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS 777
++ L GAL++ ALT +G + + P+D + KML++G ++ VLTI + LSV S
Sbjct: 557 AILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQS 616
Query: 778 VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQW---KEHQYRGD--WCEEHYLHVKS 832
F R + E AAR + D TL V+ W K + R WC +
Sbjct: 617 PFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHR 676
Query: 833 LRKAREVRSQLLDILK 848
L + +R Q ++L+
Sbjct: 677 LYEMANLRRQFKELLE 692
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/634 (36%), Positives = 362/634 (57%), Gaps = 37/634 (5%)
Query: 322 LPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 381
LP+ + ++L+ IR++QVV+V GETGSGKTTQL + +E G G++G TQPRR+AA
Sbjct: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136
Query: 382 SVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVM 441
+VA R++EE+ TE G +GY +RF D +T++K MTDG+LL E +D L +Y I++
Sbjct: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196
Query: 442 DEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPV 501
DEAHERSL+ D L G LK+++ RR D K+I+TSAT++ ++FS F + PI + GRT+PV
Sbjct: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256
Query: 502 NTLYSKTPCE-DYVEAAVKQAMTIHI----TSPPGDILIFMTGQDEIEAACFALKERMEQ 556
Y E D E QA+ + GDILIFM+G+ EI AL +
Sbjct: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK---- 312
Query: 557 LISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVI 616
+ ILP+Y++L Q ++F+ R+ ++ATN+AETSLTV GI YVI
Sbjct: 313 ------LNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVI 364
Query: 617 DTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPS 676
D G ++ Y+ + + L + P+S+A+A+QR GR GR G C RLY+E +L+ P
Sbjct: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR--PE 422
Query: 677 PV-PEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALN-----N 730
PEI RTNL +V+L + +L + ++ F F++ P + NI + + L LGA+ +
Sbjct: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482
Query: 731 VGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESD 790
LT LG ++ + P+DP LA+M+L ++ GC+ E + I S LS+ RP D+ + SD
Sbjct: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542
Query: 791 AAREKFFVQESDHLTLLYVYQQWKEHQ-------YRGDWCEEHYLHVKSLRKAREVRSQL 843
+F +ESD L + ++ E Q +R C YL+ +R+ +++ +QL
Sbjct: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR-RLCRTDYLNYLRVREWQDIYTQL 601
Query: 844 LDILKTLKIPLTSSGHDFDVVRKAICSAYF-HNAARLKGVGEYINCRNGMPCHLHPSSAI 902
++K L IP+ S ++ + A+ + H + EY RN + P S +
Sbjct: 602 RQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR-FSIFPGSGL 660
Query: 903 YGLGYTPEYVVYHELILTTKEYMQCATAVEPQWL 936
+ P++V+ EL+ T++ + + A ++P+W+
Sbjct: 661 F--KKPPKWVMVAELVETSRLWGRIAARIDPEWV 692
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/556 (37%), Positives = 320/556 (57%), Gaps = 28/556 (5%)
Query: 309 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNG 368
F + L +R LPI + +LQ ++E+QVVVV G+TG GK+TQ+ QYLL G++
Sbjct: 151 FGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH-- 208
Query: 369 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 428
V CTQPRR+A +S+AKRV E ++ G +VGY IRFE +T I ++T G+LLR+
Sbjct: 209 -VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQ 267
Query: 429 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 488
++ L +Y+V+++DE HER L D L G+L++++ +R D K+I+ SAT+N FS +F
Sbjct: 268 REPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSH 327
Query: 489 VPIFHIPGRTFPVNTLYSKTPCEDYVEAA--------VKQAMTIHITSPP---GDILIFM 537
P+ +PGR FP+ +Y + + ++ I PP GD+L+F+
Sbjct: 328 APVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFL 387
Query: 538 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 597
+G EI A Q +S T+ ++LP++S L Q K+F+ A G RKCI
Sbjct: 388 SGMAEITTVLDA-----AQAYASLTQ---RWVVLPLHSALSVSDQDKVFDVAPAGVRKCI 439
Query: 598 VATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGP 657
++TNIAETS+T+DGI +V+D+G K Y+P+ + LQ F +S+A+A+QR GRAGRTGP
Sbjct: 440 LSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGP 499
Query: 658 GTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILN 717
G CYRLY ES Y + P PVPEI+R L +VL +KS+ + + F F++PPP ++
Sbjct: 500 GVCYRLYAESDY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVET 558
Query: 718 SMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS 777
++ L GAL++ ALT +G + + P+D + KML++G + VLTI + LSV S
Sbjct: 559 AILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQS 618
Query: 778 VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKE--HQYRGD---WCEEHYLHVKS 832
F R + AR + D TL V+ W + + G+ WC +
Sbjct: 619 PFTRSAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHR 678
Query: 833 LRKAREVRSQLLDILK 848
L + +R Q ++L+
Sbjct: 679 LYEMANLRRQFKELLE 694
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 351 bits (901), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 232/655 (35%), Positives = 353/655 (53%), Gaps = 56/655 (8%)
Query: 322 LPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 381
LPI++ R ++L+ I Q++V++GETGSGK+TQL Q+L + G + + CTQPR++AAM
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 382 SVAKRVSEEMDTELGDK-VGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIV 440
++ RV EE + V F S+ + YMTD LL+ +KD L ++
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 441 MDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFP 500
+DEAHERSL+TD+L +L+K+++RR D +L++ SAT +A + S + I H+ GR FP
Sbjct: 423 IDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFP 482
Query: 501 VNTLYSKTPCED---------YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 551
V +YS + E+ Y VK A+ IH T G IL F+T Q E+E AC
Sbjct: 483 VEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWAC---- 538
Query: 552 ERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDG 611
E+ ++ P + LP++ +L + Q +F+ G RK I ATNIAETSLT+ G
Sbjct: 539 ---ERFVA------PSAIALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPG 588
Query: 612 IFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLN 671
+ YVID+G K Y P+ GM L+V VS+++A QRAGRAGRT PG CYRLY+++ + +
Sbjct: 589 VKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDF-D 647
Query: 672 EMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGAL--- 728
M + PEI+R +LG +L + +L IDN+ F+F+D P E I ++ L LGA+
Sbjct: 648 SMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEK 707
Query: 729 NNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCL------DEVLTIVSMLSVPSVFFRP 782
N V LT G +V+ L+P L K++ LGC + ++ M + S+F R
Sbjct: 708 NGVLELTQEGHCLVKLGLEPKLGKLI-----LGCFRHRMGKEGIVLAAVMANASSIFCRV 762
Query: 783 K--DRAEESDAAREKFFVQESDHLTLLYVYQQWKE--HQYRGDWCEEHYLHVKSLRKARE 838
D ++D + +F D TLL VY++W R WC E+ L+ KS+R+ +
Sbjct: 763 GNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCED 822
Query: 839 VRSQL-LDILKTLKI---------PLTSSGHDFDVVRKAICSAYFHNAARLKGVGE--YI 886
+L + I + L + P + HD ++ I ++ N A G + Y
Sbjct: 823 TVKELEICIERELTLVSPSYWVWNPNEGTKHD-KYLKMVILASLAENVAMYTGYDQLGYE 881
Query: 887 NCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGP 941
LHPS ++ G P +VV+ EL+ +Y+ C TA + + L L P
Sbjct: 882 VALTSQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDP 936
>sp|Q5XH12|DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Xenopus laevis GN=dhx32 PE=2 SV=1
Length = 748
Score = 350 bits (898), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/652 (31%), Positives = 360/652 (55%), Gaps = 31/652 (4%)
Query: 315 LAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLE---DGYTTNGIVG 371
L ++R+ LPI+ ++ + L+ + NQ+VVV SGK++Q+ Q+ E G+ +G V
Sbjct: 57 LLKERETLPIWKIKYDFLEHLAHNQIVVVSAGPKSGKSSQIPQWCAEYCLAGHYQHGAVV 116
Query: 372 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 431
CTQ + A+ +A RV++EMD +G +VGY + FE+ T+++Y TD +L RE + +
Sbjct: 117 CTQAHKQTAVWLAMRVADEMDVNIGHEVGYIVPFENCCTSETILRYCTDEMLRREMMSNP 176
Query: 432 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 491
L Y V+++D+ +ER +STDVL LK + R + K+++ + + ++G+ P+
Sbjct: 177 LLSSYGVVIIDDVYERFVSTDVLLSFLKVIAVSRPELKVVIITCPSLSGTLVSYYGNAPL 236
Query: 492 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 551
T V ++Y+ + DY +A++ IH T GDI++F+ ++EI+ A
Sbjct: 237 VE-AENTHSVESVYTTSLPRDYFHSALRLLFEIHHTKEKGDIVVFLACEEEIKRA----Y 291
Query: 552 ERMEQLISSTTREVPELLILPIYSQ------LPADLQAKIFEKAKEGTRKCIVATNIAET 605
E ++Q E+ EL+ + +Y +P + ++ + +K RK ++ T++ E+
Sbjct: 292 EHIKQEALHMNPELGELMPIALYPHQSISDYIPYE---ELDDNSKNPKRKVVLTTSLGES 348
Query: 606 SLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYT 665
+ + IF+VID G K KVYN ++ ++L P+S+ A R + G + LY
Sbjct: 349 LIWMKNIFFVIDVGIEKRKVYNTRIRAESLVTQPISKVRAKMRKHILSSSSEGKLFCLYP 408
Query: 666 ESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVL 725
E + +EM P +++ NL ++VL LK + I L DF++ P E+++ ++ L L
Sbjct: 409 ED-FAHEMKPFLTAKVEECNLISMVLFLKRMDIAGLAHCDFINRPDPESLMQALEDLDYL 467
Query: 726 GALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 785
AL+N G L++ G M EFPLDP L+K +L + C+DE+LT+ +M++ P+ F
Sbjct: 468 AALDNDGNLSEFGIIMSEFPLDPQLSKSILAACEFDCVDEMLTLAAMVTAPNCFIDLPPE 527
Query: 786 AEESD-AAREKFFVQESDHLTLLYVYQQWKE------HQYRGD-WCEEHYLHVKSLRKAR 837
A+E D + KFF E DH TL+ +Y ++++ QY + WC+ H L +L AR
Sbjct: 528 AKELDLIGKGKFFHPEGDHFTLINIYNEYEQMKRNNASQYDVEKWCQNHCLSFVALEMAR 587
Query: 838 EVRSQLLDILKTLKIPLT--SSGHDFDV--VRKAICSAYFHNAAR-LKGVGEYINCRNGM 892
+R++LLDI++ +++PLT + G D +V ++K++ S YF AR + G+G YI +
Sbjct: 588 AIRNELLDIMRRIELPLTGPAFGSDENVTNIKKSLLSGYFMQIARDVDGLGNYIMLTHKQ 647
Query: 893 PCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 944
LHP S PE+V++HE ++ + ++ + + P E P ++
Sbjct: 648 VGQLHPDSGFCNSAKVPEWVLFHEFSVSERSCIRIVSEISPNLFMEFVPPYY 699
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 349 bits (895), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 213/651 (32%), Positives = 359/651 (55%), Gaps = 28/651 (4%)
Query: 315 LAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQ----YLLEDGYTTNGIV 370
L ++R+ LPI+ + ++ + +NQVVVV G++ GK++Q+ Q Y L Y G++
Sbjct: 55 LLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVI 114
Query: 371 GCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 430
CTQ + A+ +A RV++EMD +G +VGY I FE+ T+++Y TD +L RE + +
Sbjct: 115 -CTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSN 173
Query: 431 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP 490
L Y VI++D+ HERSL+TDVL G+LK V+ R + KLIV + L K S ++G VP
Sbjct: 174 PFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYGDVP 233
Query: 491 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFAL 550
+ + + PV +Y +D E+ ++ IH + GD+++F+ + +IE
Sbjct: 234 VIEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKT---- 288
Query: 551 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGT---RKCIVATNIAETSL 607
E + Q S+ +V +L+++P+Y + L + E K R+ ++ T+ E+ +
Sbjct: 289 YELVCQEGSNLNPDVGDLVVIPLYPKEKCSLFRPVDETEKRCQVYQRRVVLTTSCGESLI 348
Query: 608 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTES 667
+ +VID G + +VYNP++ ++L + P+S++ A+ R G + G + LYTE
Sbjct: 349 WSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEE 408
Query: 668 AYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGA 727
+M P E+Q NL ++VL +K + I L DFM+ P E+++ ++ L L A
Sbjct: 409 FASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAA 468
Query: 728 LNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 787
L+N G L++ G M EFPLDP L+K +L + C+DE+LTI +M++ PS F AE
Sbjct: 469 LDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAE 528
Query: 788 ESDAAREKFFVQ-ESDHLTLLYVYQQWK--------EHQYRGDWCEEHYLHVKSLRKARE 838
E+ K F+ E DH TL+ VY ++ EH WC + +L +LR A
Sbjct: 529 EAAVTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEM-WCHDCFLSCSALRMADV 587
Query: 839 VRSQLLDILKTLKIPLT----SSGHDFDVVRKAICSAYFHNAAR-LKGVGEYINCRNGMP 893
+R++LL+I+K +++P S + ++KA+ S YF AR + G G Y+ +
Sbjct: 588 IRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQV 647
Query: 894 CHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 944
LHP S+ PE+V++H+ ++ Y++ A+AV P+ +L P ++
Sbjct: 648 AQLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYY 698
>sp|Q7L7V1|DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Homo sapiens GN=DHX32 PE=1 SV=1
Length = 743
Score = 340 bits (873), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 202/650 (31%), Positives = 356/650 (54%), Gaps = 27/650 (4%)
Query: 315 LAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQ----YLLEDGYTTNGIV 370
L ++R+ LPI+ + ++ + +NQ+V+V G+ GK+ Q+ Q Y L Y G++
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVI 114
Query: 371 GCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 430
CTQ + + +A RV++EMD +G +VGY I FE+ T+++Y TD +L RE + +
Sbjct: 115 -CTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSN 173
Query: 431 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP 490
L Y VI++D+ HERS++TDVL G+LK V+ R + KLI+ S+ K + ++G+VP
Sbjct: 174 PFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYGNVP 233
Query: 491 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFAL 550
+ + + PV +Y +D E+ ++ IH + GDI++F+ + +IE C +
Sbjct: 234 VIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVCETV 292
Query: 551 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGT---RKCIVATNIAETSL 607
+ S+ ++ EL+++P+Y + L + E K R+ ++ T+ E +
Sbjct: 293 YQG-----SNLNPDLGELVVVPLYPKEKCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLI 347
Query: 608 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTES 667
+ + +VID G + KVYNP++ ++L + P+S++ A+ R G + G + LYTE
Sbjct: 348 WSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEE 407
Query: 668 AYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGA 727
+M P E+Q NL ++VL +K + I L DFM+ P E+++ ++ L L A
Sbjct: 408 FASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAA 467
Query: 728 LNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 787
L+N G L++ G M EFPLDP L+K +L + C+DEVLTI +M++ P+ F AE
Sbjct: 468 LDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAE 527
Query: 788 ESDAAREKFFVQ-ESDHLTLLYVYQQWKEHQYRGD-------WCEEHYLHVKSLRKAREV 839
E+ K F+ E DH TL+ +Y+ +++ WC +++L+ +LR A +
Sbjct: 528 EAALTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVI 587
Query: 840 RSQLLDILKTLKIPLT----SSGHDFDVVRKAICSAYFHNAAR-LKGVGEYINCRNGMPC 894
R++LL+I+K +++P S + ++KA+ S YF AR + G G Y+ +
Sbjct: 588 RAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVA 647
Query: 895 HLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 944
LHP S PE+V++H+ ++ Y++ + + P+ +L P ++
Sbjct: 648 QLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYY 697
>sp|Q924H9|DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1
Length = 718
Score = 327 bits (837), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 212/648 (32%), Positives = 350/648 (54%), Gaps = 25/648 (3%)
Query: 315 LAEQRQYLPIFSVRDELLQVIRENQ--VVVVVGETGSGKTTQLTQYL----LEDGYTTNG 368
L EQR+ LPI++ R L+ + + VV+V G+ GSGK+TQ+ Q+ L G+ T G
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQT-G 93
Query: 369 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 428
V TQP +AAMS+A RV++EMD LG ++GY+I ED TGP+T++++ D + L+E
Sbjct: 94 QVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVA 153
Query: 429 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRR--DFKLIVTSATLNAQKFSDFF 486
+ V+++DEA ERS+++D+L G+L+ R D +++V + KF F+
Sbjct: 154 STRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFW 213
Query: 487 GSVPIFHIPGRTFPVNTL-YSKTPCEDYVEAAVKQAMTI-HITSPPGDILIFMTGQDEIE 544
G+ PI +P TL Y T D VEAA + + + PGD+L+++ ++EI
Sbjct: 214 GNSPIVRVPREPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEIS 273
Query: 545 AACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAE 604
C +L M L P +LP++ +Q ++E RK +V +A+
Sbjct: 274 LCCESLSGEMGTLAVPG----PPPRVLPLHPGCAQAIQ-TVYEDTDVSVRKIVVTHWLAD 328
Query: 605 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLY 664
S ++ I +VID+G VYNP++ ++ + P+S+ A+ R RA PG+C RLY
Sbjct: 329 FSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLY 388
Query: 665 TESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWV 724
++S E P P P++ NL ++VLLL +I + F+D P E ++ ++ L
Sbjct: 389 SKSTLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDY 448
Query: 725 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 784
L ALN+ G L+DLG + EFPL P LAK LL + C+DE+LT+ +ML+ F RP
Sbjct: 449 LAALNDDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPL 508
Query: 785 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 844
A E+ A R + DH +L+ VY+ + + WC+ L+ +SL +AR++R++L+
Sbjct: 509 SAGEA-ALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELV 567
Query: 845 DILKTLKIPLT----SSGHDFDVVRKAICSAYFHNAAR-LKGVGEYINCRNGMPCHLHPS 899
++++ +++PL+ S + ++KA+ S YF AR G G Y+ + L P
Sbjct: 568 ELMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPY 627
Query: 900 SAIYG---LGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 944
+ P +V+YH ++ + + ++P+ L EL P +F
Sbjct: 628 CSYRNRRTPAQPPTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYF 675
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 371,021,916
Number of Sequences: 539616
Number of extensions: 15899304
Number of successful extensions: 75811
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 277
Number of HSP's that attempted gapping in prelim test: 72291
Number of HSP's gapped (non-prelim): 2874
length of query: 1020
length of database: 191,569,459
effective HSP length: 128
effective length of query: 892
effective length of database: 122,498,611
effective search space: 109268761012
effective search space used: 109268761012
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)