Your job contains 1 sequence.
>001723
MATPAAAGGGWYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLD
EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWAKVKEQ
GSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALL
DANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGIQAPAVARRPAAIVDTDTEETN
GDVSAAEAVAPLNSAQRLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVRIVLEGVDK
FKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRLR
MWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPK
IGNPRKDEKPAAYAREAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGAKGPAGTKGP
AGTKGQAAAKGPAGEESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVN
VAELVVSRGLGNVINHRDFEERSNYYDALLAAEARAKAGKKGCYSSKEPPVMHIQDLTMA
PVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRNERYSN
EALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRI
PDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQ
QVGDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVE
SVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAA
EFLNEHTYNSSNEFRALVEERDSSGGKLKGQGTGTLLHVTLVAVDAEISINTLMVQEGLA
RVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDDEDPLPSAVRKVAGGRR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001723
(1020 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2159218 - symbol:Tudor2 "TUDOR-SN protein 2" s... 1704 0. 2
ZFIN|ZDB-GENE-030131-3124 - symbol:snd1 "staphylococcal n... 669 3.0e-122 3
RGD|631340 - symbol:Snd1 "staphylococcal nuclease and tud... 661 1.1e-119 3
UNIPROTKB|Q66X93 - symbol:Snd1 "Staphylococcal nuclease d... 661 1.1e-119 3
MGI|MGI:1929266 - symbol:Snd1 "staphylococcal nuclease an... 656 1.1e-118 3
UNIPROTKB|Q7KZF4 - symbol:SND1 "Staphylococcal nuclease d... 657 1.8e-118 3
UNIPROTKB|Q863B3 - symbol:SND1 "Staphylococcal nuclease d... 653 3.8e-118 3
UNIPROTKB|E2RH91 - symbol:SND1 "Uncharacterized protein" ... 654 4.5e-117 3
FB|FBgn0035121 - symbol:Tudor-SN "Tudor-SN" species:7227 ... 467 2.3e-94 3
ASPGD|ASPL0000052132 - symbol:AN0242 species:162425 "Emer... 572 1.0e-92 3
DICTYBASE|DDB_G0279659 - symbol:snd1 "Staphylococcus nucl... 441 3.0e-90 4
UNIPROTKB|G5EHM8 - symbol:MGCH7_ch7g348 "Nuclease domain-... 546 1.4e-87 3
WB|WBGene00006626 - symbol:tsn-1 species:6239 "Caenorhabd... 345 1.5e-80 3
POMBASE|SPCC645.08c - symbol:snd1 "RNA-binding protein Sn... 465 9.8e-75 3
UNIPROTKB|F1SML4 - symbol:SND1 "Uncharacterized protein" ... 307 2.0e-73 3
UNIPROTKB|H7C597 - symbol:SND1 "Staphylococcal nuclease d... 259 2.8e-28 2
UNIPROTKB|B7WPM2 - symbol:TDRD1 "Tudor domain-containing ... 195 2.6e-11 1
UNIPROTKB|H9KV62 - symbol:TDRD1 "Tudor domain-containing ... 195 2.7e-11 1
UNIPROTKB|H9KV63 - symbol:TDRD1 "Tudor domain-containing ... 195 2.7e-11 1
UNIPROTKB|Q9BXT4 - symbol:TDRD1 "Tudor domain-containing ... 195 2.9e-11 1
RGD|1306140 - symbol:Tdrd1 "tudor domain containing 1" sp... 193 7.1e-11 2
MGI|MGI:1933218 - symbol:Tdrd1 "tudor domain containing 1... 183 5.0e-10 2
UNIPROTKB|F1MZE7 - symbol:TDRD1 "Uncharacterized protein"... 182 7.4e-10 1
UNIPROTKB|I3LGS1 - symbol:TDRD1 "Uncharacterized protein"... 175 2.9e-09 1
UNIPROTKB|F1Q1V6 - symbol:TDRD1 "Uncharacterized protein"... 176 3.2e-09 1
UNIPROTKB|I3LKM6 - symbol:TDRD1 "Uncharacterized protein"... 175 1.5e-08 2
UNIPROTKB|E1BWC3 - symbol:E1BWC3 "Uncharacterized protein... 178 2.8e-08 2
UNIPROTKB|E1BWC2 - symbol:E1BWC2 "Uncharacterized protein... 166 1.2e-07 2
ZFIN|ZDB-GENE-070803-1 - symbol:tdrd1 "tudor domain conta... 157 3.5e-07 1
UNIPROTKB|I3LDE1 - symbol:LOC100521234 "Uncharacterized p... 124 1.2e-06 1
UNIPROTKB|A9CPT4 - symbol:tdrd1 "Tudor domain-containing ... 151 1.5e-06 1
POMBASE|SPBC19F8.04c - symbol:SPBC19F8.04c "nuclease" spe... 128 2.1e-05 2
UNIPROTKB|F1NF10 - symbol:F1NF10 "Uncharacterized protein... 138 2.1e-05 1
TIGR_CMR|GSU_1199 - symbol:GSU_1199 "nuclease, putative" ... 117 0.00019 1
UNIPROTKB|E1BGM7 - symbol:TDRD6 "Uncharacterized protein"... 131 0.00020 3
UNIPROTKB|O60522 - symbol:TDRD6 "Tudor domain-containing ... 140 0.00032 2
>TAIR|locus:2159218 [details] [associations]
symbol:Tudor2 "TUDOR-SN protein 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0016788 "hydrolase activity, acting on ester bonds"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0009686
"gibberellin biosynthetic process" evidence=IMP] [GO:0009845 "seed
germination" evidence=IMP] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009306 "protein secretion" evidence=IGI]
[GO:0009651 "response to salt stress" evidence=IGI;RCA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR006021 InterPro:IPR016071 InterPro:IPR016685
Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS50830 SMART:SM00318
InterPro:IPR002999 GO:GO:0005783 GO:GO:0005829 GO:GO:0009506
EMBL:CP002688 GO:GO:0046686 GO:GO:0005635 GO:GO:0006950
GO:GO:0009306 GO:GO:0003723 GO:GO:0009845 GO:GO:0016788
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:AB010069 Gene3D:2.40.50.90 GO:GO:0009686
SUPFAM:SSF50199 HOGENOM:HOG000173592 KO:K15979 OMA:RFYVQTV
EMBL:BT002044 IPI:IPI00517332 RefSeq:NP_200986.1 UniGene:At.21985
ProteinModelPortal:Q9FLT0 SMR:Q9FLT0 STRING:Q9FLT0 PRIDE:Q9FLT0
EnsemblPlants:AT5G61780.1 GeneID:836300 KEGG:ath:AT5G61780
TAIR:At5g61780 InParanoid:Q9FLT0 PhylomeDB:Q9FLT0
ProtClustDB:CLSN2686944 ArrayExpress:Q9FLT0 Genevestigator:Q9FLT0
Uniprot:Q9FLT0
Length = 985
Score = 1704 (604.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 333/523 (63%), Positives = 412/523 (78%)
Query: 499 GATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVNVAELVVSRGLGNVINHRD 558
GA + R++DFGS+FL SP KG+ +AVA AA P G N+AEL++SRGLG V+ HRD
Sbjct: 474 GAGD-RVMDFGSVFLPSPTKGD----TAVA---AAATP-GANIAELIISRGLGTVVRHRD 524
Query: 559 FEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDLTMAPVKKARDFLPFLQRSRRI 618
FEERSN+YD +S+K+ P +HI DLT+A KKA+DFLP LQR +I
Sbjct: 525 FEERSNHYDALLAAEARAIAGKKNIHSAKDSPALHIADLTVASAKKAKDFLPSLQRINQI 584
Query: 619 PAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRNERYSNEALLLMRQKILQRDVEIE 678
AVVEYVLSGHRFK+ IPKE+CSIAF+FSGVRCPGR E YS EA+ LMR+KI+QRDVEI
Sbjct: 585 SAVVEYVLSGHRFKLYIPKESCSIAFAFSGVRCPGRGEPYSEEAIALMRRKIMQRDVEIV 644
Query: 679 VETVDRTGTFLGSLWE--SRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQ 736
VE VDRTGTFLGS+WE S+TN LLEAGLAK+QT FG+DRIP++H+LE AE+SAK+Q
Sbjct: 645 VENVDRTGTFLGSMWEKNSKTNAGTYLLEAGLAKMQTGFGADRIPEAHILEMAERSAKNQ 704
Query: 737 KLKIWENYVEGEEVSNGAA-VEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLA 795
KLKIWENYVEGEEV NG++ VE +QKE LKVVVTE+LGGG+FYVQ VGDQKVAS+Q QLA
Sbjct: 705 KLKIWENYVEGEEVVNGSSKVETRQKETLKVVVTEVLGGGRFYVQTVGDQKVASIQNQLA 764
Query: 796 SLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGN 855
+L+L++AP+IG+FNPKKG+IVLAQFS DNSWNRAMIVN PR V+S ++FEVFYIDYGN
Sbjct: 765 ALSLKDAPIIGSFNPKKGDIVLAQFSLDNSWNRAMIVNGPRGAVQSPEEEFEVFYIDYGN 824
Query: 856 QELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFR 915
QE+VPY+ +RP+DPS+SS P LAQLC LAYIK+P E+++G +A E+L+ T S EFR
Sbjct: 825 QEIVPYSAIRPVDPSVSSAPGLAQLCRLAYIKVPGKEEDFGRDAGEYLHTVTLESGKEFR 884
Query: 916 ALVEERDSSXXXXXXXXXXXXXHVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQA 975
A+VEERD+S VTL+AVD EIS+N M+QEG+AR+E+R+RW +D+QA
Sbjct: 885 AVVEERDTSGGKVKGQGTGTELVVTLIAVDDEISVNAAMLQEGIARMEKRRRWEPKDKQA 944
Query: 976 ALENLEKFQEEAKTARIGMWQYGDIQSDDEDPLPSAVRKVAGG 1018
AL+ LEKFQ+EA+ +R G+W+YGDIQSDDED +P VRK G
Sbjct: 945 ALDALEKFQDEARKSRTGIWEYGDIQSDDEDNVP--VRKPGRG 985
Score = 1610 (571.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 315/466 (67%), Positives = 374/466 (80%)
Query: 1 MATPAAAGGGWYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLD 60
MAT AA W + RVKAV SGD LVITAL++ GPP EKT+TLSS++ P++ARRGG+D
Sbjct: 1 MATGAATENQWLKGRVKAVTSGDCLVITALTHNRAGPPPEKTITLSSLMAPKMARRGGID 60
Query: 61 EPFAWDSREFLRKLCIGKEVTFRVDYAVPNI-GREFGTVILGDKNVAMLVVSEGWAKVKE 119
EPFAW+SREFLRKLCIGKEV F+VDY V I GREFG+V LG++N+A LVV GWAKV+
Sbjct: 61 EPFAWESREFLRKLCIGKEVAFKVDYKVEAIAGREFGSVYLGNENLAKLVVQNGWAKVRR 120
Query: 120 QGSQ-KGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMA 178
G Q + + SP++AEL +LEEQA+ +G GRWSKVPGAAEASIRNLPPSA+GDS NF+AM
Sbjct: 121 PGQQNQDKVSPYIAELEQLEEQAQQEGFGRWSKVPGAAEASIRNLPPSAVGDSGNFDAMG 180
Query: 179 LLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGXXXXXXX---XXXXXXXDTD 235
LL A+KG+PM+GIVEQ RDGST+RVYLLPEFQFVQVFVAG D D
Sbjct: 181 LLAASKGKPMEGIVEQVRDGSTIRVYLLPEFQFVQVFVAGLQAPSMGRRQSTQEAVVDPD 240
Query: 236 -TEETNGDVSAAEAVAPLNSAQRLXXXXXXXXXXXXDEPFALDAKYFTEMRVLNREVRIV 294
T +NGD SA E PL +AQRL D PFA++AKYFTE+RVLNR+VRIV
Sbjct: 241 VTATSNGDASA-ETRGPLTTAQRLAASAASSVEVSSD-PFAMEAKYFTELRVLNRDVRIV 298
Query: 295 LEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQA 354
LEGVDKF NLIGSV+Y DG+T KDL +ELVENGLAKY+EWSANM++E+AK++LKA +LQ
Sbjct: 299 LEGVDKFNNLIGSVYYSDGDTVKDLGLELVENGLAKYVEWSANMLDEEAKKKLKATELQC 358
Query: 355 KKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLS 414
KK R++MW NYVPP SNSKAIHDQNFTGKVVEVVSGDC++VADDSIP+G+ +AERRV LS
Sbjct: 359 KKNRVKMWANYVPPASNSKAIHDQNFTGKVVEVVSGDCLVVADDSIPFGSPMAERRVCLS 418
Query: 415 SIRCPKIGNPRKDEKPAAYAREAREFLRTRLIGRQVNVQMEYSRKV 460
SIR PK+GNPR++EKPA YAREA+EFLR +LIG +V VQMEYSRK+
Sbjct: 419 SIRSPKMGNPRREEKPAPYAREAKEFLRQKLIGMEVIVQMEYSRKI 464
Score = 132 (51.5 bits), Expect = 0.00014, P = 0.00014
Identities = 49/166 (29%), Positives = 81/166 (48%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EP++ +A +++ R+V IV+E VD+ +GS++ + +T + L+E GLAK
Sbjct: 622 EPYSEEAIALMRRKIMQRDVEIVVENVDRTGTFLGSMWEKNSKT--NAGTYLLEAGLAKM 679
Query: 332 -IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQS----NSKAIHDQNFTGKVV- 385
+ A+ + E L+ A+ AK +L++W NYV + +SK Q T KVV
Sbjct: 680 QTGFGADRIPE--AHILEMAERSAKNQKLKIWENYVEGEEVVNGSSKVETRQKETLKVVV 737
Query: 386 -EVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIG--NPRKDE 428
EV+ G V ++ + LS P IG NP+K +
Sbjct: 738 TEVLGGGRFYVQTVGDQKVASIQNQLAALSLKDAPIIGSFNPKKGD 783
Score = 116 (45.9 bits), Expect = 2.3e-185, Sum P(2) = 2.3e-185
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 374 AIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAY 433
A +Q G+V V SGDC+++ + E+ + LSS+ PK+ ++P A+
Sbjct: 6 ATENQWLKGRVKAVTSGDCLVITALTHNRAGPPPEKTITLSSLMAPKMARRGGIDEPFAW 65
Query: 434 AREAREFLRTRLIGRQVNVQMEYSRKVV 461
E+REFLR IG++V +++Y + +
Sbjct: 66 --ESREFLRKLCIGKEVAFKVDYKVEAI 91
Score = 116 (45.9 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 43/166 (25%), Positives = 79/166 (47%)
Query: 655 NERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESR----TNVAVILLEAGLAK 710
++ ++ EA ++L RDV I +E VD+ +GS++ S ++ + L+E GLAK
Sbjct: 275 SDPFAMEAKYFTELRVLNRDVRIVLEGVDKFNNLIGSVYYSDGDTVKDLGLELVENGLAK 334
Query: 711 LQTSFGSDRIPDS--HLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVV 768
+ ++ + + L+ E K ++K+W NYV SN A+ Q KVV
Sbjct: 335 Y-VEWSANMLDEEAKKKLKATELQCKKNRVKMWANYVP--PASNSKAIHD-QNFTGKVV- 389
Query: 769 TEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGAFNPKKGE 814
E++ G V + + ++ L+ +P +G NP++ E
Sbjct: 390 -EVVSGDCLVVADDSIPFGSPMAERRVCLSSIRSPKMG--NPRREE 432
Score = 62 (26.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 953 LMVQEGLARVERRKRWGSRDRQAA-LENLEKFQEEAKTARIGMWQY--GDIQSDDEDPLP 1009
L+VQ G A+V RR ++D+ + + LE+ +E+A+ G W G ++ + P
Sbjct: 109 LVVQNGWAKV-RRPGQQNQDKVSPYIAELEQLEEQAQQEGFGRWSKVPGAAEASIRNLPP 167
Query: 1010 SAV 1012
SAV
Sbjct: 168 SAV 170
Score = 51 (23.0 bits), Expect = 1.5e-168, Sum P(2) = 1.5e-168
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 414 SSIRCPKIGNPRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
S +RCP G P Y+ EA +R +++ R V + +E
Sbjct: 613 SGVRCPGRGEP--------YSEEAIALMRRKIMQRDVEIVVE 646
Score = 48 (22.0 bits), Expect = 3.0e-168, Sum P(2) = 3.0e-168
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 652 PGRNER---YSNEALLLMRQKILQRDVEIEVE 680
P R E+ Y+ EA +RQK++ +V +++E
Sbjct: 428 PRREEKPAPYAREAKEFLRQKLIGMEVIVQME 459
Score = 44 (20.5 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 14/57 (24%), Positives = 24/57 (42%)
Query: 607 DFLPFLQRSRRIP--AVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRNERYSNE 661
D + L S+ P +VE V G +V + E + +G++ P R S +
Sbjct: 177 DAMGLLAASKGKPMEGIVEQVRDGSTIRVYLLPEFQFVQVFVAGLQAPSMGRRQSTQ 233
>ZFIN|ZDB-GENE-030131-3124 [details] [associations]
symbol:snd1 "staphylococcal nuclease domain
containing 1" species:7955 "Danio rerio" [GO:0016442 "RNA-induced
silencing complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0016788 "hydrolase activity, acting on ester bonds"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] InterPro:IPR002071
InterPro:IPR006021 InterPro:IPR016071 InterPro:IPR016685
Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01284 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 ZFIN:ZDB-GENE-030131-3124
GO:GO:0005737 GO:GO:0003676 GO:GO:0090305 GO:GO:0031047
GO:GO:0016442 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0004518 Gene3D:2.40.50.90 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 HOGENOM:HOG000173592
HOVERGEN:HBG057234 EMBL:BX897731 EMBL:BX855622 EMBL:BX890545
EMBL:CR931778 IPI:IPI00493820 UniGene:Dr.76177 SMR:Q5RGK8
Ensembl:ENSDART00000040405 InParanoid:Q5RGK8 Uniprot:Q5RGK8
Length = 913
Score = 669 (240.6 bits), Expect = 3.0e-122, Sum P(3) = 3.0e-122
Identities = 173/485 (35%), Positives = 261/485 (53%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 450 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 509
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ F PFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 510 IS-GETQKAKQFFPFLQRAGRSEAVVEYVFSGSRLKLYMPKETCLITFLLAGIECPRGSR 568
Query: 655 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 706
N E YS EA+L ++ +LQR+VE+EVE++D+ G F+G L N++V L+E
Sbjct: 569 NMPGGMQVAEPYSEEAMLFTKELVLQREVEVEVESMDKAGNFIGWLHIEGVNLSVALVEN 628
Query: 707 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 764
L+K+ F ++R L AE+SA+ +K K+W NY E EEV+ + + +
Sbjct: 629 ALSKVH--FTAERSSYYKTLVSAEESARQRKEKLWANYEEKPKEEVAQVTEAKERVAKYR 686
Query: 765 KVVVTEILGGGKFYVQQVGD-QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSAD 823
V VTEI G FY Q V K+ ++ + + + PV G+F P++GE +A+F AD
Sbjct: 687 SVYVTEITDGLHFYAQDVETGTKLENLMESMRGEIAAQPPVEGSFAPRRGEFCIAKF-AD 745
Query: 824 NSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQLC 881
W RA + EKVES K VFYIDYGN+E++ +L + P+ S+ PP A
Sbjct: 746 GEWYRARV-----EKVESPA-KVHVFYIDYGNREVLSSTRLAALPPAFSTRTLPPQATEY 799
Query: 882 SLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTL 941
+ AYI++P ED +A + + +N+ + L+ S VTL
Sbjct: 800 AFAYIQVPQDEDARA-DAVDSVVRDIHNT----QCLLNVEYSGSVCP---------QVTL 845
Query: 942 VAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQ 1001
D + + +V+EG+ V+ RK + Q + QE AK+AR+ +W+YGD +
Sbjct: 846 QFADTKEDVGLGLVKEGMVMVDIRKE---KYLQKMVTEYLNAQESAKSARLNIWRYGDFR 902
Query: 1002 SDDED 1006
DD D
Sbjct: 903 DDDAD 907
Score = 302 (111.4 bits), Expect = 3.0e-122, Sum P(3) = 3.0e-122
Identities = 75/196 (38%), Positives = 124/196 (63%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE + ++G++ +P+G +L L++ G A+
Sbjct: 243 EPFAAEAKFFTESRLLQRDVQIILESCPN-QVILGTILHPNGNIT-EL---LLKEGFARC 297
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + + A++ L+AA+ AK+ ++R+W +YV P +N D+ F KV++VV+ D
Sbjct: 298 VDWSMAVYTQGAEK-LRAAERSAKERKVRIWKDYVAPTANLDQ-KDRQFVAKVMQVVNAD 355
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-G---NPRKDEK--PA---AYAREAREFLR 442
I+V +S Y + ++LSSIR P++ G N KD++ P Y EAREFLR
Sbjct: 356 AIVVKLNSGEY------KTIHLSSIRPPRLEGEEKNKDKDKRFRPLYDIPYMFEAREFLR 409
Query: 443 TRLIGRQVNVQMEYSR 458
+LIG++VNV ++Y R
Sbjct: 410 KKLIGKKVNVTVDYIR 425
Score = 286 (105.7 bits), Expect = 3.0e-122, Sum P(3) = 3.0e-122
Identities = 83/219 (37%), Positives = 120/219 (54%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRG--GL-------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR G DEP+
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGALARRAIQGQPDTKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REF+RK IGKEV F V+ P GRE+G V LG +N+A +V+EG A V+
Sbjct: 79 AFQAREFMRKKVIGKEVCFTVENKTPQ-GREYGMVYLGKDTSGENIAESLVAEGLAMVRR 137
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G +G +P L LE+QAK G WS+ G +IR+L + I + NF
Sbjct: 138 EGI-RGN-NPEQVRLCDLEDQAKSSKKGLWSE--GGGSHTIRDLKYT-IENPRNF----- 187
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D+ +P+ I+E RDG +R LLP++ V V ++G
Sbjct: 188 VDSLHQKPVNAIIEHVRDGCMVRALLLPDYYLVTVMLSG 226
Score = 150 (57.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 70/227 (30%), Positives = 99/227 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLAR-----------RGGLDEP 62
A+V V + D++V+ N G KT+ LSSI PRL R D P
Sbjct: 346 AKVMQVVNADAIVVKL----NSG--EYKTIHLSSIRPPRLEGEEKNKDKDKRFRPLYDIP 399
Query: 63 FAWDSREFLRKLCIGKEVTFRVDY--AVPN---IG------REFGTVILGDKNVAMLVVS 111
+ +++REFLRK IGK+V VDY A N +G R TV +G N+A +VS
Sbjct: 400 YMFEAREFLRKKLIGKKVNVTVDYIRAATNAMEMGVPAFPERTCATVTIGGINIAEALVS 459
Query: 112 EGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDS 171
+G A V + S ELL E +A G G SK E I + + G++
Sbjct: 460 KGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GET 514
Query: 172 SNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++Y+ E + +AG
Sbjct: 515 QKAKQFFPFLQRAGRS-EAVVEYVFSGSRLKLYMPKETCLITFLLAG 560
Score = 149 (57.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 54/218 (24%), Positives = 99/218 (45%)
Query: 537 AGVNVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
+G N+AE +V+ GL V R+ +N S+ I+D
Sbjct: 119 SGENIAESLVAEGLAMV--RREGIRGNNPEQVRLCDLEDQAKSSKKGLWSEGGGSHTIRD 176
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP---- 652
L ++ R+F+ L + + + A++E+V G + L+ + + SG++ P
Sbjct: 177 LKYT-IENPRNFVDSLHQ-KPVNAIIEHVRDGCMVRALLLPDYYLVTVMLSGIKSPTFKR 234
Query: 653 ---GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAG 707
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+ G
Sbjct: 235 EADGSETPEPFAAEAKFFTESRLLQRDVQIILESCPNQ-VILGTILHPNGNITELLLKEG 293
Query: 708 LAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYV 745
A+ + + L AE+SAK +K++IW++YV
Sbjct: 294 FARCVDWSMAVYTQGAEKLRAAERSAKERKVRIWKDYV 331
Score = 119 (46.9 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 31/94 (32%), Positives = 56/94 (59%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EP++ +A FT+ VL REV + +E +DK N IG + + +G +L++ LVEN L+K
Sbjct: 578 EPYSEEAMLFTKELVLQREVEVEVESMDKAGNFIGWL-HIEGV---NLSVALVENALSK- 632
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
+ ++A + L +A+ A++ + ++W NY
Sbjct: 633 VHFTAE--RSSYYKTLVSAEESARQRKEKLWANY 664
Score = 109 (43.4 bits), Expect = 6.3e-74, Sum P(2) = 6.3e-74
Identities = 37/98 (37%), Positives = 52/98 (53%)
Query: 366 VPPQ-SNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKI--- 421
VP Q +S+A Q G V V+SG IIV P G ER++NLS+IR +
Sbjct: 5 VPAQVQSSQASAPQLQRGIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGALARR 62
Query: 422 ---GNP-RKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
G P KD +A +AREF+R ++IG++V +E
Sbjct: 63 AIQGQPDTKDTPDEPWAFQAREFMRKKVIGKEVCFTVE 100
Score = 108 (43.1 bits), Expect = 8.1e-74, Sum P(2) = 8.1e-74
Identities = 49/199 (24%), Positives = 82/199 (41%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +V+ +EV +E G V+ + +++A LV GLA
Sbjct: 75 DEPWAFQAREFMRKKVIGKEVCFTVENKTPQGREYGMVYLGKDTSGENIAESLVAEGLAM 134
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTN-----------YV--PPQSNSKAIHD 377
+ R D QAK ++ +W+ Y P++ ++H
Sbjct: 135 VRREGIRGNNPEQVRLCDLED-QAKSSKKGLWSEGGGSHTIRDLKYTIENPRNFVDSLH- 192
Query: 378 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRK-DEKPAAYARE 436
Q ++E V C++ A +P + V LS I+ P E P +A E
Sbjct: 193 QKPVNAIIEHVRDGCMVRAL-LLPDYYLVT---VMLSGIKSPTFKREADGSETPEPFAAE 248
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 249 AKFFTESRLLQRDVQIILE 267
Score = 69 (29.3 bits), Expect = 1.0e-69, Sum P(2) = 1.0e-69
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 42 TLTLSSIITPRLARRG-GLD--EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTV 98
T+ LS I +P R G + EPFA +++ F + ++V ++ + PN GT+
Sbjct: 221 TVMLSGIKSPTFKREADGSETPEPFAAEAKFFTESRLLQRDVQIILE-SCPN-QVILGTI 278
Query: 99 ILGDKNVAMLVVSEGWAK 116
+ + N+ L++ EG+A+
Sbjct: 279 LHPNGNITELLLKEGFAR 296
Score = 68 (29.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 954 MVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYG 998
+V EGLA V R G+ Q L +LE ++AK+++ G+W G
Sbjct: 127 LVAEGLAMVRREGIRGNNPEQVRLCDLE---DQAKSSKKGLWSEG 168
Score = 50 (22.7 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P + Y+ EA F + ++ R+V V++E
Sbjct: 558 LAGIECPRGSRNMPGGMQVAEPYSEEAMLFTKELVLQREVEVEVE 602
Score = 41 (19.5 bits), Expect = 7.4e-47, Sum P(3) = 7.4e-47
Identities = 28/120 (23%), Positives = 51/120 (42%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTF---LG-SLWESRTNVAVILLEAGLAKLQT 713
Y EA +R+K++ + V + V+ + R T +G + RT V + +A+
Sbjct: 400 YMFEAREFLRKKLIGKKVNVTVDYI-RAATNAMEMGVPAFPERTCATVTIGGINIAEALV 458
Query: 714 SFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 773
S G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 459 SKGLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 512
Score = 37 (18.1 bits), Expect = 9.9e-20, Sum P(2) = 9.9e-20
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 344 KRRLKAADLQAKKTRLRMWTNYVPPQSNSKA 374
K + D++ +K +M T Y+ Q ++K+
Sbjct: 860 KEGMVMVDIRKEKYLQKMVTEYLNAQESAKS 890
>RGD|631340 [details] [associations]
symbol:Snd1 "staphylococcal nuclease and tudor domain containing
1" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
InterPro:IPR002071 InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01123
PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
RGD:631340 GO:GO:0005634 GO:GO:0042470 GO:GO:0006355 GO:GO:0006351
GO:GO:0003676 GO:GO:0003713 GO:GO:0090305 GO:GO:0031047
GO:GO:0016442 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
CTD:27044 HOVERGEN:HBG057234 KO:K15979 EMBL:AY697864 EMBL:BC072471
EMBL:U83883 IPI:IPI00471608 RefSeq:NP_073185.2 UniGene:Rn.36148
ProteinModelPortal:Q66X93 SMR:Q66X93 IntAct:Q66X93 STRING:Q66X93
PhosphoSite:Q66X93 PRIDE:Q66X93 GeneID:64635 KEGG:rno:64635
UCSC:RGD:631340 InParanoid:Q66X93 NextBio:613608
Genevestigator:Q66X93 GermOnline:ENSRNOG00000031173 Uniprot:Q66X93
Length = 909
Score = 661 (237.7 bits), Expect = 1.1e-119, Sum P(3) = 1.1e-119
Identities = 176/486 (36%), Positives = 261/486 (53%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 446 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 505
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 506 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 564
Query: 655 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 706
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 565 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHMDGANLSVLLVEH 624
Query: 707 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 764
L+K+ F ++R L AE++AK +K K+W +Y E EEV + +
Sbjct: 625 ALSKVH--FTAERSAYYKPLLSAEEAAKQRKEKVWAHYEEQPVEEVMPVLEEKERSASYK 682
Query: 765 KVVVTEILGGGKFYVQQV--GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSA 822
V VTEI FYVQ V G Q + + + + S PV GA+ P++GE +A+F
Sbjct: 683 PVFVTEITDDLHFYVQDVETGTQ-LEKLMENMRSDISSHPPVEGAYAPRRGEFCIAKF-V 740
Query: 823 DNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQL 880
D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A
Sbjct: 741 DGEWYRARV-----EKVESPA-KVHVFYIDYGNREILPSTRLGALPPAFSTRVLPAQATE 794
Query: 881 CSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVT 940
+ A+I++P ED +A + + N+ VE +S HVT
Sbjct: 795 YAFAFIQVPQDEDAR-TDAVDSVVRDIQNTQCLLN--VEHLSASCP-----------HVT 840
Query: 941 LVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDI 1000
L D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD
Sbjct: 841 LQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDF 897
Query: 1001 QSDDED 1006
++DD D
Sbjct: 898 RADDAD 903
Score = 310 (114.2 bits), Expect = 1.1e-119, Sum P(3) = 1.1e-119
Identities = 75/195 (38%), Positives = 125/195 (64%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 241 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 295
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK+ RLR+W +YVPP +N D+ F KV++V++ D
Sbjct: 296 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVPPTANLDQ-KDKQFVAKVMQVLNAD 353
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G+ +D+ +P Y EAREFLR
Sbjct: 354 AIVVKLNSGDY------KTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFEAREFLRK 407
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++V+V ++Y R
Sbjct: 408 KLIGKKVSVTVDYIR 422
Score = 274 (101.5 bits), Expect = 1.1e-119, Sum P(3) = 1.1e-119
Identities = 80/219 (36%), Positives = 117/219 (53%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 20 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPW 77
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +E
Sbjct: 78 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLASRRE 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 137 -GMRAN--NPEQNRLSECEEQAKASKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 185
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP+ V V ++G
Sbjct: 186 VDSHHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSG 224
Score = 160 (61.4 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 71/225 (31%), Positives = 98/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLAR----------RGGLDEPF 63
A+V V + D++V+ N G KT+ LSSI PRL R D P+
Sbjct: 344 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPY 397
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V+ VDY VP R TV +G N+A +VS+G
Sbjct: 398 MFEAREFLRKKLIGKKVSVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKG 457
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 458 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 512
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 513 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 556
Score = 147 (56.8 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 65/278 (23%), Positives = 122/278 (43%)
Query: 538 GVNVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDL 597
G N+AE +V+ GL + R+ +N S+ I+DL
Sbjct: 119 GENIAESLVAEGLAS---RREGMRANNPEQNRLSECEEQAKASKKGMWSEGNGSHTIRDL 175
Query: 598 TMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP----- 652
++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 176 KYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRE 233
Query: 653 --GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGL 708
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+ G
Sbjct: 234 TDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLLKEGF 292
Query: 709 AKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVV 768
A+ + + L AE+ AK ++L+IW +YV A ++ K K+ + V+
Sbjct: 293 ARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVPPT-----ANLDQKDKQFVAKVM 347
Query: 769 TEILGGGKFYVQ-QVGDQK---VASVQQ-QLASLNLQE 801
++L V+ GD K ++S++ +L N+Q+
Sbjct: 348 -QVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGDNIQD 384
Score = 133 (51.9 bits), Expect = 9.5e-75, Sum P(2) = 9.5e-75
Identities = 55/199 (27%), Positives = 85/199 (42%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 74 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAS 133
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 388
E AN E++ RL + QAK ++ MW+ + S I D +T V
Sbjct: 134 RREGMRANNPEQN---RLSECEEQAKASKKGMWSE----GNGSHTIRDLKYTIENPRHFV 186
Query: 389 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 436
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 187 DSHHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRETDGSETPEPFAAE 246
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 247 AKFFTESRLLQRDVQIILE 265
Score = 116 (45.9 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE+ L+K
Sbjct: 574 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HMDGA---NLSVLLVEHALSK- 628
Query: 332 IEWSANMMEEDAKRR-LKAADLQAKKTRLRMWTNY 365
+ ++A E A + L +A+ AK+ + ++W +Y
Sbjct: 629 VHFTA---ERSAYYKPLLSAEEAAKQRKEKVWAHY 660
Score = 96 (38.9 bits), Expect = 7.5e-71, Sum P(2) = 7.5e-71
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------PR-KDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 21 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPWA 78
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 79 FPAREFLRKKLIGKEVCFTIE 99
Score = 63 (27.2 bits), Expect = 2.3e-67, Sum P(2) = 2.3e-67
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 42 TLTLSSIITPRLARR-GGLD--EPFAWDSREFLRKLCIGKEVTFRVDYAV-PNIGREFGT 97
T+ LS I P R G + EPFA +++ F + ++V ++ NI GT
Sbjct: 219 TVMLSGIKCPTFRRETDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNI---LGT 275
Query: 98 VILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQ-AKLQGLGRWSK-VPGA 155
++ + N+ L++ EG+A+ + AE LR E+ AK + L W VP
Sbjct: 276 ILHPNGNITELLLKEGFARCVDWSIAVYTRG---AEKLRAAERFAKERRLRIWRDYVPPT 332
Query: 156 A 156
A
Sbjct: 333 A 333
Score = 48 (22.0 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 554 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 598
Score = 41 (19.5 bits), Expect = 1.7e-46, Sum P(3) = 1.7e-46
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 397 YMFEAREFLRKKLIGKKVSVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 456
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 773
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 457 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 508
>UNIPROTKB|Q66X93 [details] [associations]
symbol:Snd1 "Staphylococcal nuclease domain-containing
protein 1" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR002071 InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01123
PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
RGD:631340 GO:GO:0005634 GO:GO:0042470 GO:GO:0006355 GO:GO:0006351
GO:GO:0003676 GO:GO:0003713 GO:GO:0090305 GO:GO:0031047
GO:GO:0016442 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
CTD:27044 HOVERGEN:HBG057234 KO:K15979 EMBL:AY697864 EMBL:BC072471
EMBL:U83883 IPI:IPI00471608 RefSeq:NP_073185.2 UniGene:Rn.36148
ProteinModelPortal:Q66X93 SMR:Q66X93 IntAct:Q66X93 STRING:Q66X93
PhosphoSite:Q66X93 PRIDE:Q66X93 GeneID:64635 KEGG:rno:64635
UCSC:RGD:631340 InParanoid:Q66X93 NextBio:613608
Genevestigator:Q66X93 GermOnline:ENSRNOG00000031173 Uniprot:Q66X93
Length = 909
Score = 661 (237.7 bits), Expect = 1.1e-119, Sum P(3) = 1.1e-119
Identities = 176/486 (36%), Positives = 261/486 (53%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 446 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 505
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 506 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 564
Query: 655 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 706
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 565 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHMDGANLSVLLVEH 624
Query: 707 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 764
L+K+ F ++R L AE++AK +K K+W +Y E EEV + +
Sbjct: 625 ALSKVH--FTAERSAYYKPLLSAEEAAKQRKEKVWAHYEEQPVEEVMPVLEEKERSASYK 682
Query: 765 KVVVTEILGGGKFYVQQV--GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSA 822
V VTEI FYVQ V G Q + + + + S PV GA+ P++GE +A+F
Sbjct: 683 PVFVTEITDDLHFYVQDVETGTQ-LEKLMENMRSDISSHPPVEGAYAPRRGEFCIAKF-V 740
Query: 823 DNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQL 880
D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A
Sbjct: 741 DGEWYRARV-----EKVESPA-KVHVFYIDYGNREILPSTRLGALPPAFSTRVLPAQATE 794
Query: 881 CSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVT 940
+ A+I++P ED +A + + N+ VE +S HVT
Sbjct: 795 YAFAFIQVPQDEDAR-TDAVDSVVRDIQNTQCLLN--VEHLSASCP-----------HVT 840
Query: 941 LVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDI 1000
L D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD
Sbjct: 841 LQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDF 897
Query: 1001 QSDDED 1006
++DD D
Sbjct: 898 RADDAD 903
Score = 310 (114.2 bits), Expect = 1.1e-119, Sum P(3) = 1.1e-119
Identities = 75/195 (38%), Positives = 125/195 (64%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 241 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 295
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK+ RLR+W +YVPP +N D+ F KV++V++ D
Sbjct: 296 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVPPTANLDQ-KDKQFVAKVMQVLNAD 353
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G+ +D+ +P Y EAREFLR
Sbjct: 354 AIVVKLNSGDY------KTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFEAREFLRK 407
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++V+V ++Y R
Sbjct: 408 KLIGKKVSVTVDYIR 422
Score = 274 (101.5 bits), Expect = 1.1e-119, Sum P(3) = 1.1e-119
Identities = 80/219 (36%), Positives = 117/219 (53%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 20 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPW 77
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +E
Sbjct: 78 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLASRRE 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 137 -GMRAN--NPEQNRLSECEEQAKASKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 185
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP+ V V ++G
Sbjct: 186 VDSHHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSG 224
Score = 160 (61.4 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 71/225 (31%), Positives = 98/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLAR----------RGGLDEPF 63
A+V V + D++V+ N G KT+ LSSI PRL R D P+
Sbjct: 344 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPY 397
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V+ VDY VP R TV +G N+A +VS+G
Sbjct: 398 MFEAREFLRKKLIGKKVSVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKG 457
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 458 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 512
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 513 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 556
Score = 147 (56.8 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 65/278 (23%), Positives = 122/278 (43%)
Query: 538 GVNVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDL 597
G N+AE +V+ GL + R+ +N S+ I+DL
Sbjct: 119 GENIAESLVAEGLAS---RREGMRANNPEQNRLSECEEQAKASKKGMWSEGNGSHTIRDL 175
Query: 598 TMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP----- 652
++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 176 KYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRE 233
Query: 653 --GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGL 708
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+ G
Sbjct: 234 TDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLLKEGF 292
Query: 709 AKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVV 768
A+ + + L AE+ AK ++L+IW +YV A ++ K K+ + V+
Sbjct: 293 ARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVPPT-----ANLDQKDKQFVAKVM 347
Query: 769 TEILGGGKFYVQ-QVGDQK---VASVQQ-QLASLNLQE 801
++L V+ GD K ++S++ +L N+Q+
Sbjct: 348 -QVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGDNIQD 384
Score = 133 (51.9 bits), Expect = 9.5e-75, Sum P(2) = 9.5e-75
Identities = 55/199 (27%), Positives = 85/199 (42%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 74 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAS 133
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 388
E AN E++ RL + QAK ++ MW+ + S I D +T V
Sbjct: 134 RREGMRANNPEQN---RLSECEEQAKASKKGMWSE----GNGSHTIRDLKYTIENPRHFV 186
Query: 389 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 436
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 187 DSHHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRETDGSETPEPFAAE 246
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 247 AKFFTESRLLQRDVQIILE 265
Score = 116 (45.9 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE+ L+K
Sbjct: 574 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HMDGA---NLSVLLVEHALSK- 628
Query: 332 IEWSANMMEEDAKRR-LKAADLQAKKTRLRMWTNY 365
+ ++A E A + L +A+ AK+ + ++W +Y
Sbjct: 629 VHFTA---ERSAYYKPLLSAEEAAKQRKEKVWAHY 660
Score = 96 (38.9 bits), Expect = 7.5e-71, Sum P(2) = 7.5e-71
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------PR-KDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 21 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPWA 78
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 79 FPAREFLRKKLIGKEVCFTIE 99
Score = 63 (27.2 bits), Expect = 2.3e-67, Sum P(2) = 2.3e-67
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 42 TLTLSSIITPRLARR-GGLD--EPFAWDSREFLRKLCIGKEVTFRVDYAV-PNIGREFGT 97
T+ LS I P R G + EPFA +++ F + ++V ++ NI GT
Sbjct: 219 TVMLSGIKCPTFRRETDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNI---LGT 275
Query: 98 VILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQ-AKLQGLGRWSK-VPGA 155
++ + N+ L++ EG+A+ + AE LR E+ AK + L W VP
Sbjct: 276 ILHPNGNITELLLKEGFARCVDWSIAVYTRG---AEKLRAAERFAKERRLRIWRDYVPPT 332
Query: 156 A 156
A
Sbjct: 333 A 333
Score = 48 (22.0 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 554 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 598
Score = 41 (19.5 bits), Expect = 1.7e-46, Sum P(3) = 1.7e-46
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 397 YMFEAREFLRKKLIGKKVSVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 456
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 773
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 457 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 508
>MGI|MGI:1929266 [details] [associations]
symbol:Snd1 "staphylococcal nuclease and tudor domain
containing 1" species:10090 "Mus musculus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016442
"RNA-induced silencing complex" evidence=IEA] [GO:0016788
"hydrolase activity, acting on ester bonds" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR002071 InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01123
PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
MGI:MGI:1929266 GO:GO:0005739 GO:GO:0005634 GO:GO:0042470
GO:GO:0006355 GO:GO:0006351 GO:GO:0003676 GO:GO:0090305
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525
SUPFAM:SSF50199 CTD:27044 GeneTree:ENSGT00510000047270
HOGENOM:HOG000173592 HOVERGEN:HBG057234 KO:K15979 OMA:IWKDYVA
OrthoDB:EOG45755W EMBL:AB021491 EMBL:AK088028 EMBL:AK161591
EMBL:BC007126 IPI:IPI00123129 RefSeq:NP_062750.2 UniGene:Mm.439987
ProteinModelPortal:Q78PY7 SMR:Q78PY7 DIP:DIP-32118N IntAct:Q78PY7
STRING:Q78PY7 PhosphoSite:Q78PY7 PaxDb:Q78PY7 PRIDE:Q78PY7
Ensembl:ENSMUST00000001460 GeneID:56463 KEGG:mmu:56463
UCSC:uc009bct.1 InParanoid:Q78PY7 NextBio:312718 Bgee:Q78PY7
Genevestigator:Q78PY7 GermOnline:ENSMUSG00000001424 Uniprot:Q78PY7
Length = 910
Score = 656 (236.0 bits), Expect = 1.1e-118, Sum P(3) = 1.1e-118
Identities = 174/486 (35%), Positives = 261/486 (53%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 447 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 506
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 507 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 565
Query: 655 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 706
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 566 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHMDGANLSVLLVEQ 625
Query: 707 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 764
L+K+ F ++R L AE++AK +K K+W +Y E EEV + +
Sbjct: 626 ALSKVH--FTAERSAYYKPLLSAEEAAKQRKEKVWAHYEERPVEEVMPVLEEKERSASYK 683
Query: 765 KVVVTEILGGGKFYVQQV--GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSA 822
V VTEI FYVQ V G Q + + + + + PV G++ P++GE +A+F
Sbjct: 684 PVFVTEITDDLHFYVQDVETGTQ-LEKLMENMRNDISSHPPVEGSYAPRRGEFCIAKF-V 741
Query: 823 DNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQL 880
D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A
Sbjct: 742 DGEWYRARV-----EKVESPA-KVHVFYIDYGNREILPSTRLGTLPPAFSTRVLPAQATE 795
Query: 881 CSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVT 940
+ A+I++P ED +A + + N+ VE +S HVT
Sbjct: 796 YAFAFIQVPQDEDAR-TDAVDSVVRDIQNTQCLLN--VEHLSASCP-----------HVT 841
Query: 941 LVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDI 1000
L D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD
Sbjct: 842 LQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDF 898
Query: 1001 QSDDED 1006
++DD D
Sbjct: 899 RADDAD 904
Score = 317 (116.6 bits), Expect = 1.1e-118, Sum P(3) = 1.1e-118
Identities = 77/195 (39%), Positives = 125/195 (64%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +NL+G++ +P+G +L L++ G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNLLGTILHPNGNIT-EL---LLKEGFARC 296
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK+ RLR+W +YVPP +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVPPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G+ +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 271 (100.5 bits), Expect = 1.1e-118, Sum P(3) = 1.1e-118
Identities = 79/219 (36%), Positives = 116/219 (52%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRR 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 137 EGMRAN--NPEQNRLSECEEQAKASKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP V V ++G
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPGHHLVTVMLSG 225
Score = 159 (61.0 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 71/225 (31%), Positives = 97/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLAR----------RGGLDEPF 63
A+V V + D++V+ N G KT+ LSSI PRL R D P+
Sbjct: 345 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPY 398
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V VDY VP R TV +G N+A +VS+G
Sbjct: 399 MFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKG 458
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 459 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 513
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 514 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 557
Score = 141 (54.7 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 55/222 (24%), Positives = 104/222 (46%)
Query: 594 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP- 652
I+DL ++ R F+ + + A++E+V G + L+ + SG++CP
Sbjct: 173 IRDLKYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPGHHLVTVMLSGIKCPT 230
Query: 653 ------GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILL 704
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL
Sbjct: 231 FRRETDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-LLGTILHPNGNITELLL 289
Query: 705 EAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL 764
+ G A+ + + L AE+ AK ++L+IW +YV A ++ K K+ +
Sbjct: 290 KEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVPPT-----ANLDQKDKQFV 344
Query: 765 KVVVTEILGGGKFYVQ-QVGDQK---VASVQQ-QLASLNLQE 801
V+ ++L V+ GD K ++S++ +L N+Q+
Sbjct: 345 AKVM-QVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGDNIQD 385
Score = 130 (50.8 bits), Expect = 2.6e-73, Sum P(2) = 2.6e-73
Identities = 54/199 (27%), Positives = 86/199 (43%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTN-----------Y-VPPQSNSKAIHD 377
E AN E++ RL + QAK ++ MW+ Y + + H
Sbjct: 135 RREGMRANNPEQN---RLSECEEQAKASKKGMWSEGNGSHTIRDLKYTIENPRHFVDSHH 191
Query: 378 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRK-DEKPAAYARE 436
Q ++E V D +V +P G+ L V LS I+CP E P +A E
Sbjct: 192 QKPVNAIIEHVR-DGSVVRALLLP-GHHLVT--VMLSGIKCPTFRRETDGSETPEPFAAE 247
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 115 (45.5 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 34/95 (35%), Positives = 57/95 (60%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE L+K
Sbjct: 575 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HMDGA---NLSVLLVEQALSK- 629
Query: 332 IEWSANMMEEDAKRR-LKAADLQAKKTRLRMWTNY 365
+ ++A E A + L +A+ AK+ + ++W +Y
Sbjct: 630 VHFTA---ERSAYYKPLLSAEEAAKQRKEKVWAHY 661
Score = 96 (38.9 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------PR-KDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPWA 79
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 62 (26.9 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 33/120 (27%), Positives = 55/120 (45%)
Query: 42 TLTLSSIITPRLARR-GGLD--EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTV 98
T+ LS I P R G + EPFA +++ F + ++V ++ + N GT+
Sbjct: 220 TVMLSGIKCPTFRRETDGSETPEPFAAEAKFFTESRLLQRDVQIILE-SCHNQNL-LGTI 277
Query: 99 ILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQ-AKLQGLGRWSK-VPGAA 156
+ + N+ L++ EG+A+ + AE LR E+ AK + L W VP A
Sbjct: 278 LHPNGNITELLLKEGFARCVDWSIAVYTRG---AEKLRAAERFAKERRLRIWRDYVPPTA 334
Score = 48 (22.0 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 555 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 599
Score = 41 (19.5 bits), Expect = 5.8e-47, Sum P(3) = 5.8e-47
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 457
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 773
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 509
>UNIPROTKB|Q7KZF4 [details] [associations]
symbol:SND1 "Staphylococcal nuclease domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0042470 "melanosome" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR002071 InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS01123 PROSITE:PS01284 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 EMBL:U22055 GO:GO:0005739
GO:GO:0005634 GO:GO:0005737 GO:GO:0042470 GO:GO:0019048
GO:GO:0006355 GO:GO:0006351 GO:GO:0003676 GO:GO:0090305
GO:GO:0003712 GO:GO:0031047 GO:GO:0016442 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0004518 Gene3D:2.40.50.90
eggNOG:COG1525 SUPFAM:SSF50199 CTD:27044 HOVERGEN:HBG057234
KO:K15979 OMA:IWKDYVA EMBL:BT009785 EMBL:BC017180 IPI:IPI00140420
PIR:I38968 RefSeq:NP_055205.2 UniGene:Hs.122523 PDB:2E6N PDB:2HQE
PDB:2HQX PDB:2O4X PDB:3BDL PDB:3OMC PDB:3OMG PDBsum:2E6N
PDBsum:2HQE PDBsum:2HQX PDBsum:2O4X PDBsum:3BDL PDBsum:3OMC
PDBsum:3OMG ProteinModelPortal:Q7KZF4 SMR:Q7KZF4 DIP:DIP-29613N
IntAct:Q7KZF4 STRING:Q7KZF4 PhosphoSite:Q7KZF4 DMDM:60415926
REPRODUCTION-2DPAGE:IPI00140420 PaxDb:Q7KZF4 PeptideAtlas:Q7KZF4
PRIDE:Q7KZF4 DNASU:27044 Ensembl:ENST00000354725 GeneID:27044
KEGG:hsa:27044 UCSC:uc003vmi.3 GeneCards:GC07P127292
HGNC:HGNC:30646 HPA:CAB019323 HPA:HPA002529 HPA:HPA002632
MIM:602181 neXtProt:NX_Q7KZF4 PharmGKB:PA162404053
InParanoid:Q7KZF4 OrthoDB:EOG45755W PhylomeDB:Q7KZF4 ChiTaRS:SND1
EvolutionaryTrace:Q7KZF4 GenomeRNAi:27044 NextBio:49626
ArrayExpress:Q7KZF4 Bgee:Q7KZF4 CleanEx:HS_SND1
Genevestigator:Q7KZF4 Uniprot:Q7KZF4
Length = 910
Score = 657 (236.3 bits), Expect = 1.8e-118, Sum P(3) = 1.8e-118
Identities = 172/486 (35%), Positives = 262/486 (53%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 447 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 506
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 507 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 565
Query: 655 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 706
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 566 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHIDGANLSVLLVEH 625
Query: 707 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 764
L+K+ F ++R L AE++AK +K K+W +Y E EEV + +
Sbjct: 626 ALSKVH--FTAERSSYYKSLLSAEEAAKQKKEKVWAHYEEQPVEEVMPVLEEKERSASYK 683
Query: 765 KVVVTEILGGGKFYVQQV--GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSA 822
V VTEI FYVQ V G Q + + + + + PV G++ P++GE +A+F
Sbjct: 684 PVFVTEITDDLHFYVQDVETGTQ-LEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKF-V 741
Query: 823 DNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQL 880
D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A
Sbjct: 742 DGEWYRARV-----EKVESPA-KIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATE 795
Query: 881 CSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVT 940
+ A+I++P +D+ +A + + N+ + L+ S HVT
Sbjct: 796 YAFAFIQVPQ-DDDARTDAVDSVVRDIQNT----QCLLNVEHLSAGCP---------HVT 841
Query: 941 LVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDI 1000
L D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD
Sbjct: 842 LQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDF 898
Query: 1001 QSDDED 1006
++DD D
Sbjct: 899 RADDAD 904
Score = 308 (113.5 bits), Expect = 1.8e-118, Sum P(3) = 1.8e-118
Identities = 75/195 (38%), Positives = 123/195 (63%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 296
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK+ RLR+W +YV P +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVAPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 276 (102.2 bits), Expect = 1.8e-118, Sum P(3) = 1.8e-118
Identities = 78/219 (35%), Positives = 118/219 (53%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R +K V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 21 RGIIKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRR 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 137 EGMRAN--NPEQNRLSECEEQAKAAKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP++ V V ++G
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSG 225
Score = 161 (61.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 70/225 (31%), Positives = 97/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDE----------PF 63
A+V V + D++V+ N G KT+ LSSI PRL D+ P+
Sbjct: 345 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPY 398
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V VDY VP R TV +G N+A +VS+G
Sbjct: 399 MFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKG 458
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 459 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 513
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 514 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 557
Score = 145 (56.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 51/203 (25%), Positives = 95/203 (46%)
Query: 594 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP- 652
I+DL ++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 173 IRDLKYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPT 230
Query: 653 ------GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILL 704
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL
Sbjct: 231 FRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLL 289
Query: 705 EAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL 764
+ G A+ + + L AE+ AK ++L+IW +YV + A ++ K K+ +
Sbjct: 290 KEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYV-----APTANLDQKDKQFV 344
Query: 765 KVVVTEILGGGKFYVQ-QVGDQK 786
V+ ++L V+ GD K
Sbjct: 345 AKVM-QVLNADAIVVKLNSGDYK 366
Score = 129 (50.5 bits), Expect = 2.2e-73, Sum P(2) = 2.2e-73
Identities = 55/199 (27%), Positives = 84/199 (42%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 388
E AN E++ RL + QAK + MW+ + S I D +T V
Sbjct: 135 RREGMRANNPEQN---RLSECEEQAKAAKKGMWSE----GNGSHTIRDLKYTIENPRHFV 187
Query: 389 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 436
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 188 DSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAE 247
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 116 (45.9 bits), Expect = 6.7e-27, Sum P(2) = 6.7e-27
Identities = 32/94 (34%), Positives = 56/94 (59%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE+ L+K
Sbjct: 575 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HIDGA---NLSVLLVEHALSK- 629
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
+ ++A + L +A+ AK+ + ++W +Y
Sbjct: 630 VHFTAE--RSSYYKSLLSAEEAAKQKKEKVWAHY 661
Score = 96 (38.9 bits), Expect = 6.6e-70, Sum P(2) = 6.6e-70
Identities = 31/81 (38%), Positives = 42/81 (51%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------P-RKDEKPAAYA 434
G + V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIIKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPWA 79
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 63 (27.2 bits), Expect = 2.0e-66, Sum P(2) = 2.0e-66
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 42 TLTLSSIITPRLARRG-GLD--EPFAWDSREFLRKLCIGKEVTFRVDYAV-PNIGREFGT 97
T+ LS I P R G + EPFA +++ F + ++V ++ NI GT
Sbjct: 220 TVMLSGIKCPTFRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNI---LGT 276
Query: 98 VILGDKNVAMLVVSEGWAK-------VKEQGSQKGEASPFLAELLRL 137
++ + N+ L++ EG+A+ V +G++K A+ A+ RL
Sbjct: 277 ILHPNGNITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRL 323
Score = 48 (22.0 bits), Expect = 8.5e-20, Sum P(2) = 8.5e-20
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 555 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 599
Score = 41 (19.5 bits), Expect = 1.7e-46, Sum P(3) = 1.7e-46
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 457
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 773
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 509
>UNIPROTKB|Q863B3 [details] [associations]
symbol:SND1 "Staphylococcal nuclease domain-containing
protein 1" species:9913 "Bos taurus" [GO:0042470 "melanosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002071 InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01123
PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
GO:GO:0005739 GO:GO:0005634 GO:GO:0042470 GO:GO:0006355
GO:GO:0006351 GO:GO:0003676 GO:GO:0090305 GO:GO:0031047
GO:GO:0016442 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
EMBL:AY273893 EMBL:BC104504 IPI:IPI00695802 RefSeq:NP_991353.1
UniGene:Bt.61314 ProteinModelPortal:Q863B3 SMR:Q863B3 STRING:Q863B3
PRIDE:Q863B3 Ensembl:ENSBTAT00000014154 GeneID:404098
KEGG:bta:404098 CTD:27044 GeneTree:ENSGT00510000047270
HOGENOM:HOG000173592 HOVERGEN:HBG057234 KO:K15979 OMA:IWKDYVA
NextBio:20817543 ArrayExpress:Q863B3 Uniprot:Q863B3
Length = 910
Score = 653 (234.9 bits), Expect = 3.8e-118, Sum P(3) = 3.8e-118
Identities = 176/511 (34%), Positives = 268/511 (52%)
Query: 514 LSPIKGEGDDASAVAQSNAAGQP-AGVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXX 571
+ P D A ++ A G+N+AE +VS+GL VI +R D ++RS++YD
Sbjct: 422 IRPASPATDTVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLA 481
Query: 572 XXXXXXXXXXXCYSSKEPPVMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRF 631
+S KE P+ + D++ +KA+ FLPFLQR+ R AVVEYV SG R
Sbjct: 482 AEARAIKNGKGLHSKKEVPIHRVADIS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRL 540
Query: 632 KVLIPKETCSIAFSFSGVRCP--GRN--------ERYSNEALLLMRQKILQRDVEIEVET 681
K+ +PKETC I F +G+ CP RN E +S EA L ++ +LQR+VE+EVE+
Sbjct: 541 KLYLPKETCLITFLLAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVES 600
Query: 682 VDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 741
+D+ G F+G L N++V+L+E L+K+ F ++R L AE++AK +K K+W
Sbjct: 601 MDKAGNFIGWLHIDGANLSVLLVEHALSKVH--FTAERSAYYKSLLSAEEAAKQKKEKVW 658
Query: 742 ENYVEGEEVSNGAAVEGKQKEVL--KVVVTEILGGGKFYVQQV--GDQKVASVQQQLASL 797
+Y E +E K++ V VTEI FYVQ V G Q + + + + +
Sbjct: 659 AHYEEQPVEELMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQ-LEKLMENMRND 717
Query: 798 NLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQE 857
PV G++ P++GE +A+F D W RA + EKVES K VFYIDYGN+E
Sbjct: 718 IASHPPVEGSYAPRRGEFCIAKF-VDGEWYRARV-----EKVESPA-KVHVFYIDYGNRE 770
Query: 858 LVPYNKLRPIDPSLSST--PPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFR 915
++P +L + P+ S+ P A + A+I++P ED +A + + N+ +
Sbjct: 771 ILPSTRLGTLPPAFSTRVLPAQATEYAFAFIQVPQDEDAR-TDAVDSVVRDIQNT----Q 825
Query: 916 ALVEERDSSXXXXXXXXXXXXXHVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQA 975
L+ S HVTL D++ + +V+EGL VE RK + Q
Sbjct: 826 CLLNVEHLSAGCP---------HVTLQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQK 873
Query: 976 ALENLEKFQEEAKTARIGMWQYGDIQSDDED 1006
+ QE AK+AR+ +W+YGD ++DD D
Sbjct: 874 VITEYLNAQESAKSARLNLWRYGDFRADDAD 904
Score = 308 (113.5 bits), Expect = 3.8e-118, Sum P(3) = 3.8e-118
Identities = 75/195 (38%), Positives = 123/195 (63%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 296
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK+ RLR+W +YV P +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVAPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 281 (104.0 bits), Expect = 3.8e-118, Sum P(3) = 3.8e-118
Identities = 79/219 (36%), Positives = 119/219 (54%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR + DEP+
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAVAQPDAKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRR 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 137 EGMRAN--NPEQNRLAECEEQAKASKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP++ V V ++G
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSG 225
Score = 161 (61.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 70/225 (31%), Positives = 97/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDE----------PF 63
A+V V + D++V+ N G KT+ LSSI PRL D+ P+
Sbjct: 345 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPY 398
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V VDY VP R TV +G N+A +VS+G
Sbjct: 399 MFEAREFLRKKLIGKKVNVTVDYIRPASPATDTVPAFSERTCATVTIGGINIAEALVSKG 458
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 459 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 513
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 514 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 557
Score = 145 (56.1 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 51/203 (25%), Positives = 95/203 (46%)
Query: 594 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP- 652
I+DL ++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 173 IRDLKYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPT 230
Query: 653 ------GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILL 704
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL
Sbjct: 231 FRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLL 289
Query: 705 EAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL 764
+ G A+ + + L AE+ AK ++L+IW +YV + A ++ K K+ +
Sbjct: 290 KEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYV-----APTANLDQKDKQFV 344
Query: 765 KVVVTEILGGGKFYVQ-QVGDQK 786
V+ ++L V+ GD K
Sbjct: 345 AKVM-QVLNADAIVVKLNSGDYK 366
Score = 129 (50.5 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 55/199 (27%), Positives = 85/199 (42%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 388
E AN E++ RL + QAK ++ MW+ + S I D +T V
Sbjct: 135 RREGMRANNPEQN---RLAECEEQAKASKKGMWSE----GNGSHTIRDLKYTIENPRHFV 187
Query: 389 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 436
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 188 DSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAE 247
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 116 (45.9 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE+ L+K
Sbjct: 575 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HIDGA---NLSVLLVEHALSK- 629
Query: 332 IEWSANMMEEDAK-RRLKAADLQAKKTRLRMWTNY 365
+ ++A E A + L +A+ AK+ + ++W +Y
Sbjct: 630 VHFTA---ERSAYYKSLLSAEEAAKQKKEKVWAHY 661
Score = 98 (39.6 bits), Expect = 2.1e-69, Sum P(2) = 2.1e-69
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPK------IGNP-RKDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAVAQPDAKDTPDEPWA 79
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 63 (27.2 bits), Expect = 1.0e-65, Sum P(2) = 1.0e-65
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 42 TLTLSSIITPRLARRG-GLD--EPFAWDSREFLRKLCIGKEVTFRVDYAV-PNIGREFGT 97
T+ LS I P R G + EPFA +++ F + ++V ++ NI GT
Sbjct: 220 TVMLSGIKCPTFRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNI---LGT 276
Query: 98 VILGDKNVAMLVVSEGWAK-------VKEQGSQKGEASPFLAELLRL 137
++ + N+ L++ EG+A+ V +G++K A+ A+ RL
Sbjct: 277 ILHPNGNITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRL 323
Score = 48 (22.0 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 555 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 599
Score = 42 (19.8 bits), Expect = 4.1e-47, Sum P(3) = 4.1e-47
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATDTVPAFSERTCATVTIGGINIAEALVSK 457
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 773
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 509
>UNIPROTKB|E2RH91 [details] [associations]
symbol:SND1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0016442
"RNA-induced silencing complex" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002071 InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318
InterPro:IPR002999 GO:GO:0005739 GO:GO:0003676 GO:GO:0090305
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0004518 Gene3D:2.40.50.90 SUPFAM:SSF50199
CTD:27044 GeneTree:ENSGT00510000047270 KO:K15979 OMA:IWKDYVA
EMBL:AAEX03009276 EMBL:AAEX03009275 RefSeq:XP_532436.3
Ensembl:ENSCAFT00000002687 GeneID:475204 KEGG:cfa:475204
Uniprot:E2RH91
Length = 910
Score = 654 (235.3 bits), Expect = 4.5e-117, Sum P(3) = 4.5e-117
Identities = 173/486 (35%), Positives = 261/486 (53%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 447 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 506
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 507 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 565
Query: 655 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 706
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 566 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHIDSANLSVLLVEH 625
Query: 707 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 764
L+K+ F ++R L AE++AK +K K+W +Y E EEV + +
Sbjct: 626 ALSKVH--FTAERSSYYKSLLSAEEAAKQKKEKVWAHYEEQPVEEVVPVLEEKERSASYK 683
Query: 765 KVVVTEILGGGKFYVQQV--GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSA 822
V VTEI FYVQ V G Q + + + + + PV G++ P++GE +A+F
Sbjct: 684 PVFVTEITDDLHFYVQDVETGTQ-LEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKF-V 741
Query: 823 DNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQL 880
D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A
Sbjct: 742 DGEWYRARV-----EKVESPA-KVHVFYIDYGNREILPSTRLGTLPPAFSTRVLPAQATE 795
Query: 881 CSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVT 940
+ A+I++P ED +A + + N+ + L+ S HVT
Sbjct: 796 YAFAFIQVPQDEDAR-TDAVDSVVRDIQNT----QCLLNVEHLSAGCP---------HVT 841
Query: 941 LVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDI 1000
L D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD
Sbjct: 842 LQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDF 898
Query: 1001 QSDDED 1006
++DD D
Sbjct: 899 RADDAD 904
Score = 308 (113.5 bits), Expect = 4.5e-117, Sum P(3) = 4.5e-117
Identities = 75/195 (38%), Positives = 123/195 (63%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 296
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK+ RLR+W +YV P +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVAPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 269 (99.8 bits), Expect = 4.5e-117, Sum P(3) = 4.5e-117
Identities = 78/219 (35%), Positives = 117/219 (53%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DE +
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEAW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRR 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 137 EGMRAN--NPEQNRLSECEEQAKAAKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP++ V V ++G
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSG 225
Score = 161 (61.7 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 70/225 (31%), Positives = 97/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDE----------PF 63
A+V V + D++V+ N G KT+ LSSI PRL D+ P+
Sbjct: 345 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPY 398
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V VDY VP R TV +G N+A +VS+G
Sbjct: 399 MFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKG 458
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 459 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 513
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 514 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 557
Score = 145 (56.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 51/203 (25%), Positives = 95/203 (46%)
Query: 594 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP- 652
I+DL ++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 173 IRDLKYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPT 230
Query: 653 ------GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILL 704
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL
Sbjct: 231 FRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLL 289
Query: 705 EAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL 764
+ G A+ + + L AE+ AK ++L+IW +YV + A ++ K K+ +
Sbjct: 290 KEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYV-----APTANLDQKDKQFV 344
Query: 765 KVVVTEILGGGKFYVQ-QVGDQK 786
V+ ++L V+ GD K
Sbjct: 345 AKVM-QVLNADAIVVKLNSGDYK 366
Score = 121 (47.7 bits), Expect = 5.5e-72, Sum P(2) = 5.5e-72
Identities = 54/199 (27%), Positives = 83/199 (41%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DE +A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEAWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 388
E AN E++ RL + QAK + MW+ + S I D +T V
Sbjct: 135 RREGMRANNPEQN---RLSECEEQAKAAKKGMWSE----GNGSHTIRDLKYTIENPRHFV 187
Query: 389 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 436
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 188 DSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAE 247
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 111 (44.1 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 31/94 (32%), Positives = 56/94 (59%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF+ +A FT+ VL REV + +E +DK N IG + ++A +L++ LVE+ L+K
Sbjct: 575 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHI---DSA-NLSVLLVEHALSK- 629
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
+ ++A + L +A+ AK+ + ++W +Y
Sbjct: 630 VHFTAE--RSSYYKSLLSAEEAAKQKKEKVWAHY 661
Score = 102 (41.0 bits), Expect = 5.6e-70, Sum P(2) = 5.6e-70
Identities = 33/81 (40%), Positives = 43/81 (53%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------P-RKDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD A+A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEAWA 79
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 63 (27.2 bits), Expect = 7.2e-66, Sum P(2) = 7.2e-66
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 42 TLTLSSIITPRLARRG-GLD--EPFAWDSREFLRKLCIGKEVTFRVDYAV-PNIGREFGT 97
T+ LS I P R G + EPFA +++ F + ++V ++ NI GT
Sbjct: 220 TVMLSGIKCPTFRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNI---LGT 276
Query: 98 VILGDKNVAMLVVSEGWAK-------VKEQGSQKGEASPFLAELLRL 137
++ + N+ L++ EG+A+ V +G++K A+ A+ RL
Sbjct: 277 ILHPNGNITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRL 323
Score = 48 (22.0 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 555 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 599
Score = 41 (19.5 bits), Expect = 9.4e-46, Sum P(3) = 9.4e-46
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 457
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 773
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 509
>FB|FBgn0035121 [details] [associations]
symbol:Tudor-SN "Tudor-SN" species:7227 "Drosophila
melanogaster" [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016788 "hydrolase activity, acting on ester bonds"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA;TAS] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
GO:GO:0005875 EMBL:AE014296 GO:GO:0005811 GO:GO:0003676
GO:GO:0016788 GO:GO:0031047 GO:GO:0016442 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 Gene3D:2.40.50.90 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 KO:K15979 OMA:IWKDYVA
FlyBase:FBgn0035121 EMBL:BT003270 RefSeq:NP_612021.1 UniGene:Dm.795
PDB:2WAC PDBsum:2WAC SMR:Q9W0S7 IntAct:Q9W0S7 MINT:MINT-801242
STRING:Q9W0S7 EnsemblMetazoa:FBtr0072519 EnsemblMetazoa:FBtr0332107
GeneID:38045 KEGG:dme:Dmel_CG7008 UCSC:CG7008-RA CTD:38045
InParanoid:Q9W0S7 EvolutionaryTrace:Q9W0S7 GenomeRNAi:38045
NextBio:806702 Uniprot:Q9W0S7
Length = 926
Score = 467 (169.5 bits), Expect = 2.3e-94, Sum P(3) = 2.3e-94
Identities = 142/488 (29%), Positives = 230/488 (47%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G NVAE +V++GL + +R D ++RS+ YD ++ K+ + + D
Sbjct: 456 GQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQAIKGLKGLHAKKDNATLRVND 515
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP---- 652
LT+ + +LP QR+ R A+VE+V SG R ++ +PK++C + F +G+ CP
Sbjct: 516 LTVDHSRIKVQYLPSWQRALRTEAIVEFVASGSRLRIFVPKDSCLVTFLLAGISCPRSSR 575
Query: 653 ----G----RNERYSNEALLLMRQKILQRDVEIEVETVDRTGT-FLGSLW-ESRTNVAVI 702
G E + +EAL R+++LQRDV + ++T D+ G+ +G LW +S N++V
Sbjct: 576 PALNGVPAQEGEPFGDEALTFTRERVLQRDVSVHIDTTDKAGSSVIGWLWTDSGANLSVA 635
Query: 703 LLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKE 762
L+E GLA++ F +++ L+ AE AK+ K IW NYVE EV V ++KE
Sbjct: 636 LVEEGLAEVH--FSAEKSEYYRQLKIAEDRAKAAKKNIWTNYVE--EVPKEKTVTEEEKE 691
Query: 763 VLKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQE--APVIGAF--NPKKGEIVLA 818
KVV + V ++ + Q + L+ + + F NP
Sbjct: 692 D-KVVAERKVNYENVIVTEITETLTFFAQSVESGSKLESLMSKLHADFQSNPPIAGSYTP 750
Query: 819 QFSADNSWNRAMIVNA-PREKVESVN-DKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPP 876
+ D + + N R KVE V V YIDYGN+E +P N+L + P+ SS P
Sbjct: 751 K-RGDLVAAQFTLDNQWYRAKVERVQGSNATVLYIDYGNKETLPTNRLAALPPAFSSEKP 809
Query: 877 LAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXX 936
A +LA + +P ++E EA +E N + ++ S
Sbjct: 810 YATEYALALVALPT-DNEDKEEALRAFSEDVLNHKVQLNVELKVTGSPNLA--------- 859
Query: 937 XHVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQ 996
TL ++ +V EGL E+R G R + ++ + QE A+ A + +W+
Sbjct: 860 ---TLRDPTTKVDFGKQLVAEGLVLAEQR---GERKLKELVDQYKAAQEAARVAHLAIWK 913
Query: 997 YGDIQSDD 1004
YGDI DD
Sbjct: 914 YGDITQDD 921
Score = 351 (128.6 bits), Expect = 2.3e-94, Sum P(3) = 2.3e-94
Identities = 88/214 (41%), Positives = 121/214 (56%)
Query: 16 VKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL------DEPFAWDSRE 69
VK V SGD++VI A PP EK +T S ++ P+LARR G DEP+AW+SRE
Sbjct: 29 VKQVLSGDTVVIRATKG---APPPEKQITFSHVLAPKLARRPGAGGDETKDEPWAWESRE 85
Query: 70 FLRKLCIGKEVTFRVDYAVPNIGREFGTVILG-DK----NVAMLVVSEGWAKVKEQGSQK 124
FLRK IG EVTF D N RE+G V +G DK NV +V EG V+ +G
Sbjct: 86 FLRKKLIGVEVTFTFDKPA-NSNREYGFVWIGKDKETGENVVESIVREGLVSVRREGRPT 144
Query: 125 GEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANK 184
E L+ LE+QA+ G G+WS AA+ +RN+ S+ N L+D
Sbjct: 145 AEQQT----LIELEDQARAAGRGKWSPTASAAD-KVRNIK------WSHENPAHLVDIYG 193
Query: 185 GRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
G P++ I+E RDGST+R +LLP+F ++ + ++G
Sbjct: 194 GNPVKAIIEHVRDGSTVRAFLLPDFHYITLMISG 227
Score = 251 (93.4 bits), Expect = 2.3e-94, Sum P(3) = 2.3e-94
Identities = 76/204 (37%), Positives = 113/204 (55%)
Query: 273 PFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKYI 332
PFA +A+Y+ E R+L R+V I LE V+ N IG++ YP G A+ L E GLAK +
Sbjct: 248 PFADEARYYVETRLLQRDVEIRLESVNN-SNFIGTILYPKGNIAESLLRE----GLAKCV 302
Query: 333 EWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVP--PQSNSKAIHDQNFTGKVVEVVSG 390
+WS +M+ + L+AA+ AK+ RLR W +Y P NSK +++F+G VVEV +G
Sbjct: 303 DWSMAVMKTGTDK-LRAAERFAKEKRLRQWQDYQAKTPAFNSK---EKDFSGTVVEVFNG 358
Query: 391 DCIIVADDSIPYGNALAERRVNLSSIRCPK-----IGN---------PR-KDEKPA---A 432
D I V + G ++V SSIR P+ +G PR K+ +P
Sbjct: 359 DAINVR---LSNGQV---KKVFFSSIRPPRDQRAVVGTDGEEIVKAPPRGKNYRPLYEIP 412
Query: 433 YAREAREFLRTRLIGRQVNVQMEY 456
+ +AREFLR +LI ++V ++Y
Sbjct: 413 HMFDAREFLRKKLINKKVQCNLDY 436
Score = 153 (58.9 bits), Expect = 5.9e-39, Sum P(2) = 5.9e-39
Identities = 48/175 (27%), Positives = 84/175 (48%)
Query: 618 IPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRN------------ERYSNEALLL 665
+ A++E+V G + + + I SG+RCPG +++EA
Sbjct: 197 VKAIIEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKLDADGKPDLSVKVPFADEARYY 256
Query: 666 MRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDSHL 725
+ ++LQRDVEI +E+V+ + F+G++ + N+A LL GLAK + +
Sbjct: 257 VETRLLQRDVEIRLESVNNSN-FIGTILYPKGNIAESLLREGLAKCVDWSMAVMKTGTDK 315
Query: 726 LEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQ 780
L AE+ AK ++L+ W++Y + A K+K+ VV E+ G V+
Sbjct: 316 LRAAERFAKEKRLRQWQDYQ-----AKTPAFNSKEKDFSGTVV-EVFNGDAINVR 364
Score = 148 (57.2 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 44/129 (34%), Positives = 71/129 (55%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKF-KNLIGSVFYPDGETAKDLAMELVENGLAK 330
EPF +A FT RVL R+V + ++ DK ++IG ++ G +L++ LVE GLA+
Sbjct: 587 EPFGDEALTFTRERVLQRDVSVHIDTTDKAGSSVIGWLWTDSGA---NLSVALVEEGLAE 643
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVV--EVV 388
+ +SA E R+LK A+ +AK + +WTNYV K + ++ KVV V
Sbjct: 644 -VHFSAEKSEY--YRQLKIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAERKV 700
Query: 389 SGDCIIVAD 397
+ + +IV +
Sbjct: 701 NYENVIVTE 709
Score = 132 (51.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 62 PFAWDSREFLRKLCIGKEVTFRVDYAVP---NIGREFG-TVILGDKNVAMLVVSEGWAKV 117
P +D+REFLRK I K+V +DY P N ++ TV +G +NVA +V++G A
Sbjct: 412 PHMFDAREFLRKKLINKKVQCNLDYISPPRENFPEKYCYTVSIGGQNVAEAMVAKGLATC 471
Query: 118 KEQGSQKGEASPFLAELLRLEEQAKLQGL-GRWSKVPGAAEASIRNLPPSAIGDSSNFNA 176
+ S +L+ E+QA ++GL G +K A + +L D S
Sbjct: 472 VRYRQDDDQRSSAYDQLIAAEQQA-IKGLKGLHAKKDNAT-LRVNDLTV----DHSRIKV 525
Query: 177 MALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
L + + IVE GS LR+++ + V +AG
Sbjct: 526 QYLPSWQRALRTEAIVEFVASGSRLRIFVPKDSCLVTFLLAG 567
Score = 99 (39.9 bits), Expect = 3.3e-46, Sum P(2) = 3.3e-46
Identities = 47/199 (23%), Positives = 81/199 (40%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFY-PDGETAKDLAMELVENGLA 329
DEP+A +++ F +++ EV + G V+ D ET +++ +V GL
Sbjct: 76 DEPWAWESREFLRKKLIGVEVTFTFDKPANSNREYGFVWIGKDKETGENVVESIVREGLV 135
Query: 330 KYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVS 389
E+ L+ A + + + N K H+ +V++
Sbjct: 136 SVRREGRPTAEQQTLIELEDQARAAGRGKWSPTASAADKVRNIKWSHEN--PAHLVDIYG 193
Query: 390 GD---CII--VADDSIPYGNALAERR---VNLSSIRCPKI-----GNPRKDEKPAAYARE 436
G+ II V D S L + + +S IRCP + G P K +A E
Sbjct: 194 GNPVKAIIEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKLDADGKPDLSVK-VPFADE 252
Query: 437 AREFLRTRLIGRQVNVQME 455
AR ++ TRL+ R V +++E
Sbjct: 253 ARYYVETRLLQRDVEIRLE 271
Score = 90 (36.7 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 378 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN-PRK--DE-KPAAY 433
++ +G V +V+SGD +++ G E+++ S + PK+ P DE K +
Sbjct: 23 KSLSGIVKQVLSGDTVVIRATK---GAPPPEKQITFSHVLAPKLARRPGAGGDETKDEPW 79
Query: 434 AREAREFLRTRLIGRQV 450
A E+REFLR +LIG +V
Sbjct: 80 AWESREFLRKKLIGVEV 96
Score = 76 (31.8 bits), Expect = 7.0e-31, Sum P(2) = 7.0e-31
Identities = 49/209 (23%), Positives = 88/209 (42%)
Query: 273 PFALDAKYFTEMRVLNREVRIVLEGVDKFK-NLIGSVFYPDGETAKDLAMELVENGLAKY 331
P DA+ F +++N++V+ L+ + + N Y +++A +V GLA
Sbjct: 412 PHMFDAREFLRKKLINKKVQCNLDYISPPRENFPEKYCYTVSIGGQNVAEAMVAKGLATC 471
Query: 332 IEWSANM-MEEDAKRRLKAAD---------LQAKKTRLRMWTNYVP-PQSNSKAIHDQNF 380
+ + + A +L AA+ L AKK + N + S K + ++
Sbjct: 472 VRYRQDDDQRSSAYDQLIAAEQQAIKGLKGLHAKKDNATLRVNDLTVDHSRIKVQYLPSW 531
Query: 381 -----TGKVVE-VVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAA-- 432
T +VE V SG + + +P + L L+ I CP+ P + PA
Sbjct: 532 QRALRTEAIVEFVASGSRLRIF---VPKDSCLVT--FLLAGISCPRSSRPALNGVPAQEG 586
Query: 433 --YAREAREFLRTRLIGRQVNVQMEYSRK 459
+ EA F R R++ R V+V ++ + K
Sbjct: 587 EPFGDEALTFTRERVLQRDVSVHIDTTDK 615
Score = 63 (27.2 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 42 TLTLSSIITP--RLARRGGLD----EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREF 95
TL +S I P +L G D PFA ++R ++ + ++V R++ +V N
Sbjct: 222 TLMISGIRCPGVKLDADGKPDLSVKVPFADEARYYVETRLLQRDVEIRLE-SVNN-SNFI 279
Query: 96 GTVILGDKNVAMLVVSEGWAK-------VKEQGSQKGEASPFLAELLRLEE 139
GT++ N+A ++ EG AK V + G+ K A+ A+ RL +
Sbjct: 280 GTILYPKGNIAESLLREGLAKCVDWSMAVMKTGTDKLRAAERFAKEKRLRQ 330
Score = 42 (19.8 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 954 MVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQ 996
+++EGLA+ W + + L + AK R+ WQ
Sbjct: 293 LLREGLAKCVD---WSMAVMKTGTDKLRAAERFAKEKRLRQWQ 332
>ASPGD|ASPL0000052132 [details] [associations]
symbol:AN0242 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016788 "hydrolase activity, acting
on ester bonds" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR006021 InterPro:IPR016071 InterPro:IPR016685
Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS50830 SMART:SM00318
InterPro:IPR002999 EMBL:BN001308 GO:GO:0003676 GO:GO:0016788
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 Gene3D:2.40.50.90 EMBL:AACD01000005 eggNOG:COG1525
SUPFAM:SSF50199 HOGENOM:HOG000173592 KO:K15979 OMA:IWKDYVA
OrthoDB:EOG473T0D RefSeq:XP_657846.1 ProteinModelPortal:Q5BGT8
EnsemblFungi:CADANIAT00002482 GeneID:2876024 KEGG:ani:AN0242.2
Uniprot:Q5BGT8
Length = 882
Score = 572 (206.4 bits), Expect = 1.0e-92, Sum P(3) = 1.0e-92
Identities = 167/496 (33%), Positives = 253/496 (51%)
Query: 540 NVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDLT 598
NVA +V G +VI HR D +RS YD +SSK P QD +
Sbjct: 409 NVALALVQAGYASVIRHRQDDSDRSPIYDDLMIAEAEAQKDGKGMWSSKPPKTKQYQDYS 468
Query: 599 MAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GRN- 655
+ ++KA+ + LQR +R+PA+V++V SG RF VL+P+E + SG+R P RN
Sbjct: 469 ES-LQKAKMEVSILQRQKRVPAIVDFVKSGSRFTVLVPRENAKLTLVLSGIRAPRSARNP 527
Query: 656 ----ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKL 711
E + NEA L ++ +QRDVEI+VET+D+ G F+G+L+ ++ N LLE GLA +
Sbjct: 528 GEASEPFGNEAHELANRRCMQRDVEIDVETIDKVGGFIGTLYVNKENFTKALLEEGLATV 587
Query: 712 QTSFGSDRIPDSHLLEQ--AEKSAKSQKLKIWENY------VEGEEVSNGAAVEG----K 759
++ +++ H E AE+ AK + +W ++ E EE ++G+AVE +
Sbjct: 588 H-AYSAEQ--SGHATEYFAAEQRAKEARKGLWHDWDPSKELEEEEEATSGSAVETEATTR 644
Query: 760 QKEVLKVVVTEI-LGGGKFYVQQVGDQKVASVQQQLA--SLNLQEAPVIGAFNPKK-GEI 815
+K+ V+VT + + +QQ+G A + A S ++ ++ P K G+
Sbjct: 645 RKDYRDVMVTYVDPTTARIKLQQIGTGTSALTELMSAFRSFHINKSNDNSLPGPPKAGDF 704
Query: 816 VLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTP 875
V A+F+ D W RA I REK ++ EV YIDYGN E++P++ LRP+ S+
Sbjct: 705 VAAKFTEDGEWYRAKIRRNDREKQQA-----EVLYIDYGNSEVLPWSALRPLSAQFSTQK 759
Query: 876 --PLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXX 933
P A L++I+ P Y EA ++ E TYN R LV D
Sbjct: 760 LRPQAVDAVLSFIQFPVNLPHYLEEAVSYIEEQTYN-----RELVANVD-------YVAP 807
Query: 934 XXXXHVTLVAVDA----EISINTLMVQEGLARVERR-KRWGSRDRQAALENLEKFQEEAK 988
HVTL+ + + SIN +V EGLA V R+ K W R L NL ++EA+
Sbjct: 808 EGTLHVTLLDPEGSKSLDQSINADIVHEGLATVPRKLKAW-ERAAGETLSNLRALEDEAR 866
Query: 989 TARIGMWQYGDIQSDD 1004
+R GM +YGD+ +D
Sbjct: 867 ESRRGMHEYGDVGEED 882
Score = 293 (108.2 bits), Expect = 1.0e-92, Sum P(3) = 1.0e-92
Identities = 83/211 (39%), Positives = 123/211 (58%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEPFAWDSREFLRK 73
ARVK+V SGD++V++ + NP +E+ L+L+ + PRL R G DEP+A+ SREFLR+
Sbjct: 5 ARVKSVLSGDTVVLSHVHNP----AQERVLSLAYVSAPRLRREG--DEPYAFQSREFLRE 58
Query: 74 LCIGKEVTFRVDYAVPNIGREFGTVILGDKNVAM--LVVSEGWAKVKEQ-GSQKGEASPF 130
L +GK V F+ Y+VP+ RE+G + L V + +VV EGW++V+E+ G + ++
Sbjct: 59 LLVGKVVQFQALYSVPSSQREYGKIKLPTFEVTLPEIVVQEGWSRVREEAGKRSDDSEET 118
Query: 131 LA--ELLR-LEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRP 187
LA E LR LE+ A+ +G G W G E D N A +L+D G+
Sbjct: 119 LAMLERLRALEDHARTEGKGVWGSGNGRIETRY---------DLEN--AKSLVDEWSGKH 167
Query: 188 MQGIVEQARDGSTLRVYLL--PEFQFVQVFV 216
++GIVE+ G L V LL PE + +QV V
Sbjct: 168 LEGIVEKVLTGDRLVVRLLVAPE-EHLQVIV 197
Score = 170 (64.9 bits), Expect = 3.8e-66, Sum P(2) = 3.8e-66
Identities = 46/119 (38%), Positives = 63/119 (52%)
Query: 39 REKTLTLSSIITPRLARRGGLDEPFAWDSREFLRKLCIGKEVTFRVDYAVPNI-G---RE 94
+EK L+LSSI P+ + PFA D++EFLRK IGK V ++ P G RE
Sbjct: 342 QEKKLSLSSIRQPKPS--DPKQAPFAADAKEFLRKRIIGKHVKVTINGKKPATEGYEERE 399
Query: 95 FGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVP 153
TVI G+ NVA+ +V G+A V + SP +L+ E +A+ G G WS P
Sbjct: 400 VATVIQGNTNVALALVQAGYASVIRHRQDDSDRSPIYDDLMIAEAEAQKDGKGMWSSKP 458
Score = 168 (64.2 bits), Expect = 1.0e-92, Sum P(3) = 1.0e-92
Identities = 52/166 (31%), Positives = 93/166 (56%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EP+ +A+ F E R+L R+V++ L GV LI +V +P+G ++A L+E GLA+
Sbjct: 220 EPYGEEAQQFVESRILQRKVQVSLLGVTPQGQLIATVLHPNG----NIARYLLEAGLARC 275
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
+ + ++ + + ++ AK RL ++T V P+ + +Q++ VV V++ D
Sbjct: 276 HDHHSPLLGAEMAA-FRRSEKVAKDARLGLFTGLVAPKGPAGGATEQDYV--VVRVLNAD 332
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKP-AAYARE 436
I V + + G E++++LSSIR PK +P+ + P AA A+E
Sbjct: 333 TIFVRNKA---GQ---EKKLSLSSIRQPKPSDPK--QAPFAADAKE 370
Score = 145 (56.1 bits), Expect = 2.6e-90, Sum P(3) = 2.6e-90
Identities = 45/146 (30%), Positives = 80/146 (54%)
Query: 318 DLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHD 377
++A L+E GLA+ + + ++ + + ++ AK RL ++T V P+ + +
Sbjct: 262 NIARYLLEAGLARCHDHHSPLLGAEMAA-FRRSEKVAKDARLGLFTGLVAPKGPAGGATE 320
Query: 378 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREA 437
Q++ VV V++ D I V + + G E++++LSSIR PK +P K A +A +A
Sbjct: 321 QDYV--VVRVLNADTIFVRNKA---GQ---EKKLSLSSIRQPKPSDP----KQAPFAADA 368
Query: 438 REFLRTRLIGRQVNVQMEYSRKVVVE 463
+EFLR R+IG+ V V + +K E
Sbjct: 369 KEFLRKRIIGKHVKVTIN-GKKPATE 393
Score = 133 (51.9 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 53/206 (25%), Positives = 95/206 (46%)
Query: 616 RRIPAVVEYVLSGHRF--KVLI-PKETCSIAFSFSGVRCP--------GRN---ERYSNE 661
+ + +VE VL+G R ++L+ P+E + +GVR P G+ E Y E
Sbjct: 166 KHLEGIVEKVLTGDRLVVRLLVAPEEHLQVIVVVAGVRAPATKRVGADGKEQPAEPYGEE 225
Query: 662 ALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIP 721
A + +ILQR V++ + V G + ++ N+A LLEAGLA+
Sbjct: 226 AQQFVESRILQRKVQVSLLGVTPQGQLIATVLHPNGNIARYLLEAGLARCHDHHSPLLGA 285
Query: 722 DSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQ- 780
+ ++EK AK +L ++ V + + GA + VV +L +V+
Sbjct: 286 EMAAFRRSEKVAKDARLGLFTGLVAPKGPAGGATEQD-------YVVVRVLNADTIFVRN 338
Query: 781 QVGDQK---VASVQQQLASLNLQEAP 803
+ G +K ++S++Q S + ++AP
Sbjct: 339 KAGQEKKLSLSSIRQPKPS-DPKQAP 363
Score = 124 (48.7 bits), Expect = 0.00088, P = 0.00087
Identities = 37/117 (31%), Positives = 56/117 (47%)
Query: 38 PREK---TLTLSSIITPRLARRGG-LDEPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGR 93
PRE TL LS I PR AR G EPF ++ E + C+ ++V V+ + +G
Sbjct: 505 PRENAKLTLVLSGIRAPRSARNPGEASEPFGNEAHELANRRCMQRDVEIDVE-TIDKVGG 563
Query: 94 EFGTVILGDKNVAMLVVSEGWAKVKEQGS-QKGEASPFLAELLRLEEQAKLQGLGRW 149
GT+ + +N ++ EG A V + Q G A+ + A E++AK G W
Sbjct: 564 FIGTLYVNKENFTKALLEEGLATVHAYSAEQSGHATEYFAA----EQRAKEARKGLW 616
Score = 105 (42.0 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 52/208 (25%), Positives = 90/208 (43%)
Query: 273 PFALDAKYFTEMRVLNREVRIVLEG----VDKFKNL-IGSVFYPDGETAKDLAMELVENG 327
PFA DAK F R++ + V++ + G + ++ + +V G T ++A+ LV+ G
Sbjct: 363 PFAADAKEFLRKRIIGKHVKVTINGKKPATEGYEEREVATVI--QGNT--NVALALVQAG 418
Query: 328 LAKYIEWSANMMEEDA-KRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVE 386
A I + + L A+ +A+K MW++ PP++ + ++ +E
Sbjct: 419 YASVIRHRQDDSDRSPIYDDLMIAEAEAQKDGKGMWSSK-PPKTKQYQDYSESLQKAKME 477
Query: 387 V--------VSGDCIIVADDS-----IPYGNALAERRVNLSSIRCPKIG-NPRKDEKPAA 432
V V V S +P NA + + LS IR P+ NP + +P
Sbjct: 478 VSILQRQKRVPAIVDFVKSGSRFTVLVPRENA--KLTLVLSGIRAPRSARNPGEASEP-- 533
Query: 433 YAREAREFLRTRLIGRQVNVQMEYSRKV 460
+ EA E R + R V + +E KV
Sbjct: 534 FGNEAHELANRRCMQRDVEIDVETIDKV 561
Score = 99 (39.9 bits), Expect = 5.1e-27, Sum P(2) = 5.1e-27
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF +A R + R+V I +E +DK IG+++ ++ L+E GLA
Sbjct: 532 EPFGNEAHELANRRCMQRDVEIDVETIDKVGGFIGTLYV----NKENFTKALLEEGLATV 587
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVE 386
+SA + AA+ +AK+ R +W ++ P + + ++ +G VE
Sbjct: 588 HAYSAE--QSGHATEYFAAEQRAKEARKGLWHDWDPSKELEE--EEEATSGSAVE 638
Score = 98 (39.6 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 47/206 (22%), Positives = 96/206 (46%)
Query: 271 DEPFALDAKYFTEMRVLNREVRI-VLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLA 329
DEP+A ++ F ++ + V+ L V + G + P E L +V+ G +
Sbjct: 45 DEPYAFQSREFLRELLVGKVVQFQALYSVPSSQREYGKIKLPTFEVT--LPEIVVQEGWS 102
Query: 330 KYIEWSANMMEEDAK-----RRLKAADLQAKKTRLRMW--------TNYVPPQSNSKAIH 376
+ E + ++ + RL+A + A+ +W T Y N+K++
Sbjct: 103 RVREEAGKRSDDSEETLAMLERLRALEDHARTEGKGVWGSGNGRIETRY--DLENAKSLV 160
Query: 377 DQNFTGK----VVE-VVSGDCIIVADDSIPYGNALAERRVNLSSIRCP---KIGNPRKDE 428
D+ ++GK +VE V++GD ++V P + + V ++ +R P ++G K++
Sbjct: 161 DE-WSGKHLEGIVEKVLTGDRLVVRLLVAPEEHL--QVIVVVAGVRAPATKRVGADGKEQ 217
Query: 429 KPAAYAREAREFLRTRLIGRQVNVQM 454
Y EA++F+ +R++ R+V V +
Sbjct: 218 PAEPYGEEAQQFVESRILQRKVQVSL 243
Score = 93 (37.8 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 383 KVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREAREFLR 442
+V V+SGD ++++ N ER ++L+ + P++ R+ ++P YA ++REFLR
Sbjct: 6 RVKSVLSGDTVVLSH----VHNPAQERVLSLAYVSAPRLR--REGDEP--YAFQSREFLR 57
Query: 443 TRLIGRQVNVQMEYS 457
L+G+ V Q YS
Sbjct: 58 ELLVGKVVQFQALYS 72
Score = 78 (32.5 bits), Expect = 1.3e-38, Sum P(4) = 1.3e-38
Identities = 37/157 (23%), Positives = 74/157 (47%)
Query: 645 SFSGVRCPGRNER----YSNEALLLMRQKILQRDVEIEVE-----TVDRTGTFLGSLWES 695
S S +R P ++ ++ +A +R++I+ + V++ + T + ++ +
Sbjct: 347 SLSSIRQPKPSDPKQAPFAADAKEFLRKRIIGKHVKVTINGKKPATEGYEEREVATVIQG 406
Query: 696 RTNVAVILLEAGLAKL--QTSFGSDRIP--DSHLLEQAEK--------SAKSQKLKIWEN 743
TNVA+ L++AG A + SDR P D ++ +AE S+K K K +++
Sbjct: 407 NTNVALALVQAGYASVIRHRQDDSDRSPIYDDLMIAEAEAQKDGKGMWSSKPPKTKQYQD 466
Query: 744 YVEG-EEVSNGAAVEGKQKEVLKVVVTEILGGGKFYV 779
Y E ++ ++ +QK V +V + G +F V
Sbjct: 467 YSESLQKAKMEVSILQRQKRV-PAIVDFVKSGSRFTV 502
Score = 54 (24.1 bits), Expect = 1.3e-38, Sum P(4) = 1.3e-38
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 954 MVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGD----IQSDDEDPLP 1009
+++EGLA V + + A E ++ AK AR G+W D ++ ++E
Sbjct: 579 LLEEGLATVHA---YSAEQSGHATEYFAA-EQRAKEARKGLWHDWDPSKELEEEEEATSG 634
Query: 1010 SAVRKVAGGRR 1020
SAV A RR
Sbjct: 635 SAVETEATTRR 645
>DICTYBASE|DDB_G0279659 [details] [associations]
symbol:snd1 "Staphylococcus nuclease (SNase-like)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0016788
"hydrolase activity, acting on ester bonds" evidence=IEA]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISS] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 dictyBase:DDB_G0279659
GO:GO:0005634 GenomeReviews:CM000152_GR GO:GO:0003676 GO:GO:0016788
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 PROSITE:PS50304
EMBL:AAFI02000032 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
KO:K15979 RefSeq:XP_641583.1 ProteinModelPortal:Q54WH0
EnsemblProtists:DDB0231754 GeneID:8622157 KEGG:ddi:DDB_G0279659
InParanoid:Q54WH0 OMA:RFYVQTV ProtClustDB:CLSZ2497222
Uniprot:Q54WH0
Length = 921
Score = 441 (160.3 bits), Expect = 3.0e-90, Sum P(4) = 3.0e-90
Identities = 135/406 (33%), Positives = 204/406 (50%)
Query: 526 AVAQSNAAGQP-----AGV-NVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXX 579
A+A SN +P G NV+ +V GL + H+ + R+ Y+
Sbjct: 432 AIASSNLPEKPYYSVFLGKGNVSLGLVEAGLARLTEHKGADNRAIDYEALITAENKAKKK 491
Query: 580 XXXCYSSKEP-PVMHIQDLTMAP--VK-KARDFLPFLQRSRRIPAVVEYVLSGHRFKVLI 635
YS+K+ P ++ D++ +K KA+ LP + R +PAVV+YV S R K+ I
Sbjct: 492 HSGLYSNKDSAPSFNVNDVSSEDKNLKAKAQKLLPHI-RGIVLPAVVDYVFSAQRVKLFI 550
Query: 636 PKETCSIAFSFSGVRCPGR--NERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLW 693
KE+C I F+ SGVR P R NE SN+AL R+ + Q DV I++E +D+ G F+G+L
Sbjct: 551 EKESCMINFTMSGVRAPRRDENEELSNQALGFSREHLHQHDVHIQIEDIDKGGNFIGTLM 610
Query: 694 ESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEE--VS 751
N A+ L+E G A + +R+ D E AE AKS +L +W+NY EE V+
Sbjct: 611 VGNKNFALSLVEMGFASIYDPM--NRLNDYQRFEDAENKAKSSRLNLWKNYDPEEEQRVA 668
Query: 752 NG-AAVEGKQKEVLKVVVTE-----ILGGGKFYVQQVGDQKVASVQQQLASLNLQ-EAPV 804
N AA E ++K+ K E ++ + Y+Q + K ++ QLASL + E
Sbjct: 669 NQKAAAEEERKQQQKAETGEAYIRAVVSPTEVYLQ-FANNKTKDIESQLASLEINNEDST 727
Query: 805 IGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVND-KFEVFYIDYGNQELVPYNK 863
I A PK G+IV + D W+R+ K+ S+ D K V ID G +E P ++
Sbjct: 728 IVAM-PKVGDIVKFKSQHDKKWHRS--------KITSIADGKINVNLIDLGERESFPQSQ 778
Query: 864 ----LRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNE 905
+R I+ L S P L L LA K P+ +D Y +A +F+ +
Sbjct: 779 SSTLIRNINHKLQSLPSLVTLVKLASCKNPSNDDIYN-DAMDFMEK 823
Score = 267 (99.0 bits), Expect = 3.0e-90, Sum P(4) = 3.0e-90
Identities = 77/212 (36%), Positives = 109/212 (51%)
Query: 16 VKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEP------FAWDSRE 69
V+AV SGDSLVI L + P E +LS + PRL G D+P FAW+SRE
Sbjct: 23 VRAVNSGDSLVIQDLKTAD-SPKVE--YSLSHLTVPRLGYHGSNDKPPTKDLPFAWESRE 79
Query: 70 FLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD---KNVAMLVVSEGWAKVKEQGSQKGE 126
FLR CIGK+V F DY P G++F +V L D ++ ++ EGWA + + K
Sbjct: 80 FLRSKCIGKKVQFFTDYTAPT-GKKFISVYLYDDLENSLNKQMIEEGWASLYRSTTGKEN 138
Query: 127 ASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGR 186
P L++LE +A + LG +K P A SIR P I FN + KG+
Sbjct: 139 KKPEYLNLIQLESEAISKELGIHNKNPIAITNSIR--PIHTINSFDLFNKL------KGK 190
Query: 187 PMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+ +VEQ R+ ++ RV + P F + ++G
Sbjct: 191 QLTAVVEQVRNAASYRVTITPSFHTFLIQLSG 222
Score = 240 (89.5 bits), Expect = 3.0e-90, Sum P(4) = 3.0e-90
Identities = 66/201 (32%), Positives = 107/201 (53%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFAL+A+ F +L+R+V++ L+ DK NL G++ D +D+A EL++NGL Y
Sbjct: 239 EPFALEAESFISKNLLHRDVQLTLDTFDKQGNLFGTIKCAD----RDVACELLKNGLGTY 294
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGK---VVEVV 388
+ WS + LK A+ AK +R+W Y P S+S + + + + +
Sbjct: 295 VPWSGATRSAPDQMLLKQAEETAKGQGIRVW--YQSPSSSSTSSSSSSSSSSNEPYPKEI 352
Query: 389 SGDCIIVADDS---IPYGNALAERRVNLSSIRCPKIGNP-RKDEKPAA----YAREAREF 440
G I + ++ I N E +V L+SIR P P K++K + YA EA+E+
Sbjct: 353 DGKVIDIGNNGTVGILSENDRKEYKVTLASIRVPNFTKPSEKEDKDSKFERYYAYEAKEW 412
Query: 441 LRTRLIGRQVNVQMEYSRKVV 461
LR RLIG++V ++E+ R +
Sbjct: 413 LRKRLIGQKVIAKLEFIRPAI 433
Score = 177 (67.4 bits), Expect = 4.0e-21, Sum P(4) = 4.0e-21
Identities = 59/217 (27%), Positives = 103/217 (47%)
Query: 598 TMAPVKKARDFLPFLQ-RSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPG--- 653
++ P+ F F + + +++ AVVE V + ++V I + SGV+CPG
Sbjct: 171 SIRPIHTINSFDLFNKLKGKQLTAVVEQVRNAASYRVTITPSFHTFLIQLSGVQCPGYKK 230
Query: 654 --RN----ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAG 707
N E ++ EA + + +L RDV++ ++T D+ G G++ + +VA LL+ G
Sbjct: 231 DNNNQMQPEPFALEAESFISKNLLHRDVQLTLDTFDKQGNLFGTIKCADRDVACELLKNG 290
Query: 708 LAKLQTSFGSDR-IPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL-K 765
L G+ R PD LL+QAE++AK Q +++W S+ ++ E K
Sbjct: 291 LGTYVPWSGATRSAPDQMLLKQAEETAKGQGIRVWYQSPSSSSTSSSSSSSSSSNEPYPK 350
Query: 766 VV---VTEILGGGKFYVQQVGDQKVASVQQQLASLNL 799
+ V +I G + D+K V LAS+ +
Sbjct: 351 EIDGKVIDIGNNGTVGILSENDRKEYKVT--LASIRV 385
Score = 127 (49.8 bits), Expect = 3.0e-90, Sum P(4) = 3.0e-90
Identities = 37/116 (31%), Positives = 60/116 (51%)
Query: 904 NEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVDAEISINTLMVQEGLARVE 963
N+ YN + +F E D HV L++ +A I IN +V+ GL V+
Sbjct: 810 NDDIYNDAMDFMEK-EFLDLKVGVNIIRDIDGTQHV-LLSDNAGI-INGELVRNGLVSVD 866
Query: 964 RRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDDEDPLPSAVRKVAGGR 1019
R + S ++ L+ +++AK+ R+G+W++GDI SDDED P + K GG+
Sbjct: 867 RSTKLPS------IQQLQDEEQKAKSKRLGVWRFGDIDSDDEDDKPRSNFKGKGGK 916
Score = 118 (46.6 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 48/215 (22%), Positives = 100/215 (46%)
Query: 17 KAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLAR---RGGLDEPF----AWDSRE 69
K + G++ + LS + +E +TL+SI P + + D F A++++E
Sbjct: 355 KVIDIGNNGTVGILSENDR---KEYKVTLASIRVPNFTKPSEKEDKDSKFERYYAYEAKE 411
Query: 70 FLRKLCIGKEVTFRVDYAVPNIG------REFGTVILGDKNVAMLVVSEGWAKVKEQGSQ 123
+LRK IG++V ++++ P I + + +V LG NV++ +V G A++ E
Sbjct: 412 WLRKRLIGQKVIAKLEFIRPAIASSNLPEKPYYSVFLGKGNVSLGLVEAGLARLTEHKGA 471
Query: 124 KGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDAN 183
A + A L+ E +AK + G +S A ++ ++ S+ + A LL
Sbjct: 472 DNRAIDYEA-LITAENKAKKKHSGLYSNKDSAPSFNVNDV--SSEDKNLKAKAQKLLPHI 528
Query: 184 KGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+G + +V+ +++++ E + ++G
Sbjct: 529 RGIVLPAVVDYVFSAQRVKLFIEKESCMINFTMSG 563
Score = 107 (42.7 bits), Expect = 2.8e-33, Sum P(3) = 2.8e-33
Identities = 32/112 (28%), Positives = 57/112 (50%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
+E + A F+ + +V I +E +DK N IG++ + K+ A+ LVE G A
Sbjct: 572 NEELSNQALGFSREHLHQHDVHIQIEDIDKGGNFIGTLMVGN----KNFALSLVEMGFAS 627
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQ----SNSKAIHDQ 378
+ N + + +R + A+ +AK +RL +W NY P + +N KA ++
Sbjct: 628 IYD-PMNRLND--YQRFEDAENKAKSSRLNLWKNYDPEEEQRVANQKAAAEE 676
Score = 101 (40.6 bits), Expect = 3.6e-52, Sum P(3) = 3.6e-52
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 61 EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWAK-VKE 119
EPFA ++ F+ K + ++V +D G FGT+ D++VA ++ G V
Sbjct: 239 EPFALEAESFISKNLLHRDVQLTLD-TFDKQGNLFGTIKCADRDVACELLKNGLGTYVPW 297
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEAS 159
G+ + L L + EE AK QG+ W + P ++ S
Sbjct: 298 SGATRSAPDQML--LKQAEETAKGQGIRVWYQSPSSSSTS 335
Score = 88 (36.0 bits), Expect = 8.3e-51, Sum P(3) = 8.3e-51
Identities = 30/96 (31%), Positives = 51/96 (53%)
Query: 369 QSN--SKAIHDQNFTGKVVEVV-SGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPR 425
QSN I Q T VV V SGD +++ D + ++ + +LS + P++G
Sbjct: 5 QSNVPQSQIQPQVPTIGVVRAVNSGDSLVIQD--LKTADS-PKVEYSLSHLTVPRLGYHG 61
Query: 426 KDEKPAA----YAREAREFLRTRLIGRQVNVQMEYS 457
++KP +A E+REFLR++ IG++V +Y+
Sbjct: 62 SNDKPPTKDLPFAWESREFLRSKCIGKKVQFFTDYT 97
Score = 80 (33.2 bits), Expect = 5.6e-50, Sum P(3) = 5.6e-50
Identities = 42/197 (21%), Positives = 77/197 (39%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLE-GVDKFKNLIGSVFYPDGETAKDLAMELVENGLA 329
D PFA +++ F + + ++V+ + K I Y D E + L +++E G A
Sbjct: 70 DLPFAWESREFLRSKCIGKKVQFFTDYTAPTGKKFISVYLYDDLENS--LNKQMIEEGWA 127
Query: 330 KYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQS--NS-KAIHDQN----FT- 381
S E L L+++ + + P + NS + IH N F
Sbjct: 128 SLYR-STTGKENKKPEYLNLIQLESEAISKELGIHNKNPIAITNSIRPIHTINSFDLFNK 186
Query: 382 --GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDE-KPAAYAREAR 438
GK + V A + + + LS ++CP ++ +P +A EA
Sbjct: 187 LKGKQLTAVVEQVRNAASYRVTITPSFHTFLIQLSGVQCPGYKKDNNNQMQPEPFALEAE 246
Query: 439 EFLRTRLIGRQVNVQME 455
F+ L+ R V + ++
Sbjct: 247 SFISKNLLHRDVQLTLD 263
Score = 74 (31.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 30/124 (24%), Positives = 53/124 (42%)
Query: 44 TLSSIITPRLARRGGLDEPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGDK 103
T+S + PR L SRE L + +V +++ + G GT+++G+K
Sbjct: 560 TMSGVRAPRRDENEELSNQALGFSREHLHQ----HDVHIQIE-DIDKGGNFIGTLMVGNK 614
Query: 104 NVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNL 163
N A+ +V G+A + + ++ + F E E +AK L W E + N
Sbjct: 615 NFALSLVEMGFASIYDPMNRLNDYQRF--E--DAENKAKSSRLNLWKNYDPEEEQRVANQ 670
Query: 164 PPSA 167
+A
Sbjct: 671 KAAA 674
Score = 69 (29.3 bits), Expect = 4.4e-41, Sum P(3) = 4.4e-41
Identities = 24/91 (26%), Positives = 46/91 (50%)
Query: 652 PGRNERYSNEALLLMRQKILQRDVEIEVETV-DRTGTFLGSLWESRTNVAVILLEAGLAK 710
P ++ Y N+A+ M ++ L D+++ V + D GT L ++ + L+ GL
Sbjct: 808 PSNDDIY-NDAMDFMEKEFL--DLKVGVNIIRDIDGTQHVLLSDNAGIINGELVRNGLVS 864
Query: 711 LQTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 741
+ S ++P L+ E+ AKS++L +W
Sbjct: 865 VDRS---TKLPSIQQLQDEEQKAKSKRLGVW 892
Score = 69 (29.3 bits), Expect = 2.4e-29, Sum P(3) = 2.4e-29
Identities = 43/194 (22%), Positives = 79/194 (40%)
Query: 274 FALDAKYFTEMRVLNREVRIVLEGVDKF---KNLIGSVFYPDGETAKDLAMELVENGLAK 330
+A +AK + R++ ++V LE + NL +Y ++++ LVE GLA+
Sbjct: 405 YAYEAKEWLRKRLIGQKVIAKLEFIRPAIASSNLPEKPYYSVFLGKGNVSLGLVEAGLAR 464
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQS---NSKAIHDQNFTGKVVEV 387
E L A+ +AKK +++N S N + D+N K ++
Sbjct: 465 LTEHKGADNRAIDYEALITAENKAKKKHSGLYSNKDSAPSFNVNDVSSEDKNLKAKAQKL 524
Query: 388 VSGDCIIVADDSIPYGNALAERRVNLSSIRC------PKIGNPRKDEKPAAYAREAREFL 441
+ IV + Y + ++ + C + PR+DE + +A F
Sbjct: 525 LPHIRGIVLPAVVDYVFSAQRVKLFIEKESCMINFTMSGVRAPRRDENEEL-SNQALGFS 583
Query: 442 RTRLIGRQVNVQME 455
R L V++Q+E
Sbjct: 584 REHLHQHDVHIQIE 597
Score = 53 (23.7 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 277 DAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSA 336
DA F E L+ +V GV+ +++ G+ + A + ELV NGL ++ S
Sbjct: 816 DAMDFMEKEFLDLKV-----GVNIIRDIDGTQHVLLSDNAGIINGELVRNGLVS-VDRST 869
Query: 337 NMMEEDAKRRLKAADLQAKKTRLRMW 362
+ + ++L+ + +AK RL +W
Sbjct: 870 KL---PSIQQLQDEEQKAKSKRLGVW 892
Score = 44 (20.5 bits), Expect = 4.7e-38, Sum P(4) = 4.7e-38
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 938 HVTLVAVDAEIS-INTLMVQE---GLARVER--RKRWGSRDRQAALENLEKFQEEAKTAR 991
H+ + +D + I TLMV L+ VE + +R + E + +AK++R
Sbjct: 593 HIQIEDIDKGGNFIGTLMVGNKNFALSLVEMGFASIYDPMNRLNDYQRFEDAENKAKSSR 652
Query: 992 IGMWQYGDIQSD 1003
+ +W+ D + +
Sbjct: 653 LNLWKNYDPEEE 664
Score = 40 (19.1 bits), Expect = 1.2e-46, Sum P(4) = 1.2e-46
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 786 KVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSA 822
K+ ++ +AS NL E P F K G + L A
Sbjct: 425 KLEFIRPAIASSNLPEKPYYSVFLGK-GNVSLGLVEA 460
>UNIPROTKB|G5EHM8 [details] [associations]
symbol:MGCH7_ch7g348 "Nuclease domain-containing protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 GO:GO:0003676 GO:GO:0016788
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:CM000230 EMBL:CM001237 Gene3D:2.40.50.90
SUPFAM:SSF50199 KO:K15979 RefSeq:XP_003721166.1
ProteinModelPortal:G5EHM8 EnsemblFungi:MGG_12646T0 GeneID:5050519
KEGG:mgr:MGG_12646 Uniprot:G5EHM8
Length = 894
Score = 546 (197.3 bits), Expect = 1.4e-87, Sum P(3) = 1.4e-87
Identities = 162/521 (31%), Positives = 261/521 (50%)
Query: 518 KGEGD-DASAVAQSNAAGQPAGVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXX 575
+ EGD +A VA AG+ N+ ++V G +VI HR D +R+ YD
Sbjct: 388 EAEGDFEAKEVATVTQAGK----NIGLILVQEGYASVIRHRKDDTDRAPNYDELLAAQEQ 443
Query: 576 XXXXXXXCYSSKEPPVMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLI 635
+S K P + D + + +++A+ L LQR +++PA+V++ SG RF +LI
Sbjct: 444 AKTDGKGMWSGKAPKIKQFTDASES-LQRAKIQLSVLQRQKKVPAIVDFCKSGSRFTILI 502
Query: 636 PKETCSIAFSFSGVRCP---GRN------ERYSNEALLLMRQKILQRDVEIEVETVDRTG 686
P+E+ + G+R P GRN E + EAL L ++ QRDVE++V +D+ G
Sbjct: 503 PRESVKLTLVLGGIRAPRAPGRNPQTDKGEPFGQEALDLANKRCNQRDVEVDVLDLDKVG 562
Query: 687 TFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYV- 745
F+G L+ R + A IL+E GLA + + +++ ++ L AEK AK + +W ++
Sbjct: 563 GFIGDLYVGRESFAKILVEEGLASVH-QYSAEKSGNATELNAAEKRAKEARKGMWHDWTP 621
Query: 746 -EGEEVSNG----AAVEG-----KQKEVLKVVVTEILGGGKFYVQQVGDQKVA--SVQQQ 793
+ +E G AAVE K ++ +VVT I G+ +Q+VG A ++ +
Sbjct: 622 SDDDEEDAGEQAAAAVESINIDKKPQDYRDIVVTNIEPNGRLKIQEVGKGTAALETMMTE 681
Query: 794 LASLNLQEAPVI--GAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYI 851
+ A + G NPK GE V A+FSAD W R I + R + EV YI
Sbjct: 682 FKKFHNNPANNVSGGLTNPKAGEYVAAKFSADGQWYRGRIRSNDRAAKMA-----EVVYI 736
Query: 852 DYGNQELVPYNKLRPID-PSLSSTPPLAQL--CSLAYIKIPALEDEYGPEAAEFLNEHTY 908
D+GN E P++KLRP+D P + AQ SL+++++P +Y EA + E T
Sbjct: 737 DFGNHEKQPWSKLRPLDQPQFTVQKLKAQATDASLSFVELPVNHPDYMNEALNAMAEMT- 795
Query: 909 NSSNEFRAL---VEERDSSXXXXXXXXXXXXXHVTLVAVDAEISINTLMVQEGLARVERR 965
+ AL V+ +D + + A+ S+N +V G A V R+
Sbjct: 796 -EGRQLVALYDFVDSKDGNLAYITIFDPKAGGSGGSGST-AKDSLNREIVANGYAMVPRK 853
Query: 966 -KRWG-SRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDD 1004
K W S+ +A L++L++ + +AK R+GMW+YGDI ++
Sbjct: 854 LKPWERSKVFEATLKSLKEVESQAKQDRLGMWEYGDISFEE 894
Score = 268 (99.4 bits), Expect = 1.4e-87, Sum P(3) = 1.4e-87
Identities = 79/239 (33%), Positives = 119/239 (49%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEPFAWDSREFLRK 73
A VK++ SGD+LV+++ +NPN E+T +L+ + PRL + G DE FA+ SREFLR+
Sbjct: 8 AVVKSILSGDTLVLSSPNNPN----LERTFSLAFVSAPRLNKDG--DEAFAFQSREFLRE 61
Query: 74 LCIGKEVTFRVDYAVPNIGREFGTVIL-GDKNVAMLVVSEGWAKVKEQGSQKGEASPFLA 132
CIGK V ++ Y +P GRE+G+ I+ + +V GWAKV+E +K E L
Sbjct: 62 SCIGKPVQCKILYTIPGSGREYGSAIVKAGPELPDALVKAGWAKVREDAGKKEEDEEVLQ 121
Query: 133 --ELLR-LEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQ 189
E+LR LE +A+ G G W+ G E ++N + + KG+ +
Sbjct: 122 RLEVLRQLENEARSDGRGLWAGTGGHIE--VQN----------DLGGPEFMKEWKGKTVD 169
Query: 190 GIVEQARDGSTLRV-YLLPEFQFVQVF--VAGXXXXXXXXXXXXXXDTDTEETNGDVSA 245
G++E+ G L V LL + + QV VAG EE + A
Sbjct: 170 GVIERVLSGDRLLVRLLLSDKKHCQVMTLVAGIRTPATQRAGQNGTTQPAEEYGNEAKA 228
Score = 184 (69.8 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 52/157 (33%), Positives = 75/157 (47%)
Query: 2 ATPAAAGGGWYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDE 61
A AA GG + V + DS+++ + S E+ + SS+ PR A +
Sbjct: 309 AVKAAGEGGSHDMTVAKIIGADSIIVRSKSGA------ERRINFSSVRGPRTAEPS--EA 360
Query: 62 PFAWDSREFLRKLCIGKEVTFRVDYAVPNIG----REFGTVILGDKNVAMLVVSEGWAKV 117
PF +++EFLRK IGK V +D G +E TV KN+ +++V EG+A V
Sbjct: 361 PFREEAKEFLRKKLIGKHVQITIDGKKEAEGDFEAKEVATVTQAGKNIGLILVQEGYASV 420
Query: 118 KEQGSQKGEASPFLAELLRLEEQAKLQGLGRWS-KVP 153
+ +P ELL +EQAK G G WS K P
Sbjct: 421 IRHRKDDTDRAPNYDELLAAQEQAKTDGKGMWSGKAP 457
Score = 177 (67.4 bits), Expect = 1.4e-87, Sum P(3) = 1.4e-87
Identities = 50/153 (32%), Positives = 81/153 (52%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
E + +AK F E R+L R+++I + G +L+ S+ +P G ++A L+E GLA+
Sbjct: 220 EEYGNEAKAFVETRLLQRKIKIDIVGASPQGHLVASLIHPRG----NIAEFLLEEGLARC 275
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++ + M+ E R L+AA+ +A+ RLR+ N + HD V +++ D
Sbjct: 276 NDFHSTMLGEKMAR-LRAAEKKAQDGRLRLHKNRAVKAAGEGGSHDMT----VAKIIGAD 330
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKIGNP 424
IIV S G AERR+N SS+R P+ P
Sbjct: 331 SIIVRSKS---G---AERRINFSSVRGPRTAEP 357
Score = 169 (64.5 bits), Expect = 9.7e-87, Sum P(3) = 9.7e-87
Identities = 48/138 (34%), Positives = 75/138 (54%)
Query: 318 DLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHD 377
++A L+E GLA+ ++ + M+ E R L+AA+ +A+ RLR+ N + HD
Sbjct: 262 NIAEFLLEEGLARCNDFHSTMLGEKMAR-LRAAEKKAQDGRLRLHKNRAVKAAGEGGSHD 320
Query: 378 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREA 437
V +++ D IIV S G AERR+N SS+R P+ P E P + EA
Sbjct: 321 MT----VAKIIGADSIIVRSKS---G---AERRINFSSVRGPRTAEP--SEAP--FREEA 366
Query: 438 REFLRTRLIGRQVNVQME 455
+EFLR +LIG+ V + ++
Sbjct: 367 KEFLRKKLIGKHVQITID 384
Score = 154 (59.3 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 46/145 (31%), Positives = 72/145 (49%)
Query: 614 RSRRIPAVVEYVLSGHRFKV---LIPKETCSIAFSFSGVRCP-----GRN------ERYS 659
+ + + V+E VLSG R V L K+ C + +G+R P G+N E Y
Sbjct: 164 KGKTVDGVIERVLSGDRLLVRLLLSDKKHCQVMTLVAGIRTPATQRAGQNGTTQPAEEYG 223
Query: 660 NEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDR 719
NEA + ++LQR ++I++ G + SL R N+A LLE GLA+ F S
Sbjct: 224 NEAKAFVETRLLQRKIKIDIVGASPQGHLVASLIHPRGNIAEFLLEEGLARCN-DFHSTM 282
Query: 720 IPDSHL-LEQAEKSAKSQKLKIWEN 743
+ + L AEK A+ +L++ +N
Sbjct: 283 LGEKMARLRAAEKKAQDGRLRLHKN 307
Score = 104 (41.7 bits), Expect = 8.5e-25, Sum P(2) = 8.5e-25
Identities = 34/120 (28%), Positives = 55/120 (45%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF +A R R+V + + +DK IG ++ G + A LVE GLA
Sbjct: 532 EPFGQEALDLANKRCNQRDVEVDVLDLDKVGGFIGDLYV--GR--ESFAKILVEEGLASV 587
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++SA + L AA+ +AK+ R MW ++ P + + +Q VE ++ D
Sbjct: 588 HQYSAE--KSGNATELNAAEKRAKEARKGMWHDWTPSDDDEEDAGEQ--AAAAVESINID 643
Score = 101 (40.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 37/119 (31%), Positives = 56/119 (47%)
Query: 38 PREK---TLTLSSIITPRL-ARRGGLD--EPFAWDSREFLRKLCIGKEVTFRVDYAVPNI 91
PRE TL L I PR R D EPF ++ + K C ++V V + +
Sbjct: 503 PRESVKLTLVLGGIRAPRAPGRNPQTDKGEPFGQEALDLANKRCNQRDVEVDV-LDLDKV 561
Query: 92 GREFGTVILGDKNVAMLVVSEGWAKVKEQGSQK-GEASPFLAELLRLEEQAKLQGLGRW 149
G G + +G ++ A ++V EG A V + ++K G A+ EL E++AK G W
Sbjct: 562 GGFIGDLYVGRESFAKILVEEGLASVHQYSAEKSGNAT----ELNAAEKRAKEARKGMW 616
Score = 88 (36.0 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 378 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREA 437
+ F V ++SGD ++++ + P N ER +L+ + P++ N DE A+A ++
Sbjct: 4 KTFIAVVKSILSGDTLVLSSPNNP--NL--ERTFSLAFVSAPRL-NKDGDE---AFAFQS 55
Query: 438 REFLRTRLIGRQVNVQMEYS 457
REFLR IG+ V ++ Y+
Sbjct: 56 REFLRESCIGKPVQCKILYT 75
Score = 83 (34.3 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 313 GETAKD-LAMELVENGLA----KYIEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
G TAKD L E+V NG A K W + + E + LK + QAK+ RL MW
Sbjct: 831 GSTAKDSLNREIVANGYAMVPRKLKPWERSKVFEATLKSLKEVESQAKQDRLGMW 885
Score = 78 (32.5 bits), Expect = 2.3e-38, Sum P(4) = 2.3e-38
Identities = 27/108 (25%), Positives = 54/108 (50%)
Query: 645 SFSGVRCPGRNER----YSNEALLLMRQKILQRDVEIEVE-TVDRTGTF----LGSLWES 695
+FS VR P E + EA +R+K++ + V+I ++ + G F + ++ ++
Sbjct: 345 NFSSVRGPRTAEPSEAPFREEAKEFLRKKLIGKHVQITIDGKKEAEGDFEAKEVATVTQA 404
Query: 696 RTNVAVILLEAGLAKL--QTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 741
N+ +IL++ G A + +DR P+ L A++ AK+ +W
Sbjct: 405 GKNIGLILVQEGYASVIRHRKDDTDRAPNYDELLAAQEQAKTDGKGMW 452
Score = 76 (31.8 bits), Expect = 5.0e-53, Sum P(2) = 5.0e-53
Identities = 45/202 (22%), Positives = 82/202 (40%)
Query: 271 DEPFALDAKYFTEMRVLNREVRI-VLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLA 329
DE FA ++ F + + V+ +L + GS G D LV+ G A
Sbjct: 48 DEAFAFQSREFLRESCIGKPVQCKILYTIPGSGREYGSAIVKAGPELPDA---LVKAGWA 104
Query: 330 KYIEWSANMMEEDAK--RRLKAA---DLQAKKTRLRMWTN---YVPPQSN------SKAI 375
K E A EED + +RL+ + +A+ +W ++ Q++ K
Sbjct: 105 KVRE-DAGKKEEDEEVLQRLEVLRQLENEARSDGRGLWAGTGGHIEVQNDLGGPEFMKEW 163
Query: 376 HDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCP---KIGNPRKDEKPAA 432
+ G + V+SGD ++V + + ++ IR P + G +
Sbjct: 164 KGKTVDGVIERVLSGDRLLVR--LLLSDKKHCQVMTLVAGIRTPATQRAGQNGTTQPAEE 221
Query: 433 YAREAREFLRTRLIGRQVNVQM 454
Y EA+ F+ TRL+ R++ + +
Sbjct: 222 YGNEAKAFVETRLLQRKIKIDI 243
Score = 71 (30.1 bits), Expect = 7.7e-24, Sum P(3) = 7.7e-24
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFK-NLIGSVFYPDGETAKDLAMELVENGLA 329
+ PF +AK F +++ + V+I ++G + + + + K++ + LV+ G A
Sbjct: 359 EAPFREEAKEFLRKKLIGKHVQITIDGKKEAEGDFEAKEVATVTQAGKNIGLILVQEGYA 418
Query: 330 KYIEWSANMMEEDAKR-RLKAADLQAKKTRLRMWTNYVP 367
I + + L AA QAK MW+ P
Sbjct: 419 SVIRHRKDDTDRAPNYDELLAAQEQAKTDGKGMWSGKAP 457
Score = 70 (29.7 bits), Expect = 2.3e-38, Sum P(4) = 2.3e-38
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 949 SINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDDED 1006
S ++V+EGLA V + S ++ L ++ AK AR GMW DDE+
Sbjct: 574 SFAKILVEEGLASVHQY----SAEKSGNATELNAAEKRAKEARKGMWHDWTPSDDDEE 627
Score = 38 (18.4 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 17/78 (21%), Positives = 29/78 (37%)
Query: 912 NEFRALVEERDSSXXXXXXXXXXX-XXHVTLVAVDAEISINTLMVQEGLARVERRKRWGS 970
NE +A VE R H+ + +I +++EGLAR
Sbjct: 224 NEAKAFVETRLLQRKIKIDIVGASPQGHLVASLIHPRGNIAEFLLEEGLARCNDFHSTML 283
Query: 971 RDRQAALENLEKFQEEAK 988
++ A L EK ++ +
Sbjct: 284 GEKMARLRAAEKKAQDGR 301
>WB|WBGene00006626 [details] [associations]
symbol:tsn-1 species:6239 "Caenorhabditis elegans"
[GO:0016442 "RNA-induced silencing complex" evidence=IEA;IPI]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016788
"hydrolase activity, acting on ester bonds" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0035195 "gene silencing
by miRNA" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
GO:GO:0005829 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0000003 GO:GO:0003676 GO:GO:0016788 GO:GO:0016442
GO:GO:0035195 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
EMBL:FO081114 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 HOGENOM:HOG000173592 KO:K15979
OMA:IWKDYVA PIR:B88131 RefSeq:NP_494839.1 HSSP:P00644
ProteinModelPortal:Q19328 SMR:Q19328 STRING:Q19328 PaxDb:Q19328
EnsemblMetazoa:F10G7.2.1 EnsemblMetazoa:F10G7.2.2 GeneID:173811
KEGG:cel:CELE_F10G7.2 UCSC:F10G7.2.1 CTD:173811 WormBase:F10G7.2
InParanoid:Q19328 NextBio:881213 Uniprot:Q19328
Length = 914
Score = 345 (126.5 bits), Expect = 1.5e-80, Sum P(3) = 1.5e-80
Identities = 134/499 (26%), Positives = 225/499 (45%)
Query: 540 NVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSK--EPPVMH-IQ 595
N+AE ++SRGL V+ HR D E RS+ YD ++ K E H IQ
Sbjct: 445 NIAEGLISRGLSKVVRHRADDENRSSEYDTLLAAEANAEKGKKGLFADKTAEKKDTHRIQ 504
Query: 596 DLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--- 652
++T + KA+ FLP+LQR R VVE++ G R ++ IPKET I F G+ CP
Sbjct: 505 EIT-GDLAKAKQFLPYLQRGGRAEGVVEFLSGGSRLRIYIPKETVLITFLLGGINCPKGA 563
Query: 653 ---------GRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWES---RTNVA 700
G E +++EA R+ +LQ +V++EVE+ D+ G F+G L+ S T+ A
Sbjct: 564 RVGPGGVSTGAAEPFADEAAAFTRKLVLQHEVQLEVESTDKNGNFVGYLYVSPDGNTSRA 623
Query: 701 VILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAA-VEGK 759
+ L EA ++ S H AE+S L EN + + + A E +
Sbjct: 624 INLSEA---LVENGLAS-----LHFT--AERSGHYNALLSAENKAKKAKKNIWANFTEEQ 673
Query: 760 QKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQ 819
+E ++V + K +QV +A + ++ N+++ P I + + LA+
Sbjct: 674 HQEEVEVQQADT-SERKQNFRQVAVTDIAPGALRFSAQNIEDGPKIEKMTTEMRQ-ALAE 731
Query: 820 ---FSADNSWNRAMIVNAP--------REKVESVN-DKFEVFYIDYGNQELVPYNKLRPI 867
+ + R + A R KVESV + E+ YIDYGN+E + KL I
Sbjct: 732 HPPLAGSYTTKRGDLCVAKFSQDGQWYRCKVESVRAGQAEIVYIDYGNRETIEAVKLAQI 791
Query: 868 DPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXX 927
++ P + +LA K+P ++Y ++ ++ + S+ F
Sbjct: 792 PAGFANFPAGVREYNLALAKLP--NEDYVQLTSDAFAQYLFGHSSVF------------I 837
Query: 928 XXXXXXXXXXHVTLV--AVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQE 985
+VT+ + + ++ I ++ EGLA + R+ R Q + + +E
Sbjct: 838 NSEYKVGTSEYVTVYYDSGNKKVDIGKSLIAEGLALADHRRE--PR-LQTLVNDYNTTEE 894
Query: 986 EAKTARIGMWQYGDIQSDD 1004
A+ +R +W+YGD +D
Sbjct: 895 VARKSRKNIWEYGDFTGND 913
Score = 306 (112.8 bits), Expect = 1.5e-80, Sum P(3) = 1.5e-80
Identities = 86/229 (37%), Positives = 128/229 (55%)
Query: 4 PAA--AGGGWYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARR----- 56
PAA A R VK+V SGD++++ P+ GPP E T+ LS++ PRL RR
Sbjct: 14 PAASSANPAVRRGLVKSVLSGDAVILQG--QPHNGPPPEWTVYLSNVTAPRLGRRPTDSA 71
Query: 57 -GGLDEPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD------KNVAMLV 109
DEP+AWDSRE+LR+ +G+ VTF D+ + GR+ G + LG +NVA
Sbjct: 72 SATPDEPYAWDSREYLRQKLVGQFVTFVRDFTATS-GRDHGRIYLGGTSPADAENVAEGA 130
Query: 110 VSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIG 169
VS G +V+ QG E S +LL L+EQAK G G+W+ G +IR++ +
Sbjct: 131 VSAGLLEVR-QGKVADEYS---TKLLELQEQAKSAGRGKWNSNAG----TIRDI--RWVI 180
Query: 170 DSSNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
D N L+D +P+ ++E RDGST+R +LLP F+++ + ++G
Sbjct: 181 D----NPRELVDKYAQKPIDAVIEMVRDGSTVRAFLLPNFEYITLQLSG 225
Score = 297 (109.6 bits), Expect = 1.5e-80, Sum P(3) = 1.5e-80
Identities = 73/195 (37%), Positives = 117/195 (60%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
E F+ +AK+F E R+L R+V+I+LE +N +GS+ +P G A+ L E G AK
Sbjct: 242 EAFSEEAKFFAESRLLQRDVQIILESTSN-QNFVGSIVHPKGNIAESLLRE----GYAKC 296
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+ A+ QAK+ RLR+W +Y P S++ + + FTGKVVE+V D
Sbjct: 297 VDWSIGLCTGGAQK-LRDAERQAKEKRLRLWKSY-QPTSSAYSGDRKAFTGKVVEIVLSD 354
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPK-------IGNPRKDEKPA---AYAREAREFL 441
++V D G+ E +++LSSIR P+ G P + +P + +AREFL
Sbjct: 355 AVVVQKDD---GS---EVKLHLSSIRLPRESGDDKATGGPGRQFRPLYDIPFMFQAREFL 408
Query: 442 RTRLIGRQVNVQMEY 456
R RL+G++V +Q++Y
Sbjct: 409 RKRLLGKKVQIQIDY 423
Score = 156 (60.0 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 50/159 (31%), Positives = 75/159 (47%)
Query: 618 IPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPG-RN--------ERYSNEALLLMRQ 668
I AV+E V G + + I SGVR P RN E +S EA
Sbjct: 195 IDAVIEMVRDGSTVRAFLLPNFEYITLQLSGVRAPSTRNPNAADSRAEAFSEEAKFFAES 254
Query: 669 KILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAK-LQTSFGSDRIPDSHLLE 727
++LQRDV+I +E+ F+GS+ + N+A LL G AK + S G + L
Sbjct: 255 RLLQRDVQIILESTSNQN-FVGSIVHPKGNIAESLLREGYAKCVDWSIGLCT-GGAQKLR 312
Query: 728 QAEKSAKSQKLKIWENYVEGEEVSNG--AAVEGKQKEVL 764
AE+ AK ++L++W++Y +G A GK E++
Sbjct: 313 DAERQAKEKRLRLWKSYQPTSSAYSGDRKAFTGKVVEIV 351
Score = 148 (57.2 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 52/192 (27%), Positives = 84/192 (43%)
Query: 60 DEPFAWDSREFLRKLCIGKEVTFRVDYAVP---NIGREF-GTVILGDKNVAMLVVSEGWA 115
D PF + +REFLRK +GK+V ++DY P N + T+ +GD+N+A ++S G +
Sbjct: 397 DIPFMFQAREFLRKRLLGKKVQIQIDYVQPKSENFPEKTCATIKIGDQNIAEGLISRGLS 456
Query: 116 KV-KEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNF 174
KV + + + +S + LL E A+ G ++ AE + GD +
Sbjct: 457 KVVRHRADDENRSSEY-DTLLAAEANAEKGKKGLFADK--TAEKKDTHRIQEITGDLAKA 513
Query: 175 NAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGXXXXXXXXXXXXXXDT 234
L +G +G+VE GS LR+Y+ E + + G T
Sbjct: 514 KQF-LPYLQRGGRAEGVVEFLSGGSRLRIYIPKETVLITFLLGGINCPKGARVGPGGVST 572
Query: 235 DTEETNGDVSAA 246
E D +AA
Sbjct: 573 GAAEPFADEAAA 584
Score = 145 (56.1 bits), Expect = 3.4e-33, Sum P(2) = 3.4e-33
Identities = 37/101 (36%), Positives = 57/101 (56%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFY-PDGETAK--DLAMELVENGL 328
EPFA +A FT VL EV++ +E DK N +G ++ PDG T++ +L+ LVENGL
Sbjct: 576 EPFADEAAAFTRKLVLQHEVQLEVESTDKNGNFVGYLYVSPDGNTSRAINLSEALVENGL 635
Query: 329 AKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQ 369
A + ++A L +A+ +AKK + +W N+ Q
Sbjct: 636 AS-LHFTAE--RSGHYNALLSAENKAKKAKKNIWANFTEEQ 673
Score = 105 (42.0 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
Identities = 53/214 (24%), Positives = 89/214 (41%)
Query: 254 SAQRLXXXXXXXXXXXXDEPFALDAKYFTEMRVLNREVRIVLE-----GVDKFKNLIGSV 308
+A RL DEP+A D++ + +++ + V V + G D + +G
Sbjct: 59 TAPRLGRRPTDSASATPDEPYAWDSREYLRQKLVGQFVTFVRDFTATSGRDHGRIYLGGT 118
Query: 309 FYPDGETAKDLAME--LVENGLAKYI-EWSANMME--EDAKRRLKAA-DLQAKKTRLRMW 362
D E + A+ L+E K E+S ++E E AK + + A R W
Sbjct: 119 SPADAENVAEGAVSAGLLEVRQGKVADEYSTKLLELQEQAKSAGRGKWNSNAGTIRDIRW 178
Query: 363 TNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIG 422
P + K + Q V+E+V D V +P + + LS +R P
Sbjct: 179 VIDNPRELVDK--YAQKPIDAVIEMVR-DGSTVRAFLLPNFEYIT---LQLSGVRAPSTR 232
Query: 423 NPRK-DEKPAAYAREAREFLRTRLIGRQVNVQME 455
NP D + A++ EA+ F +RL+ R V + +E
Sbjct: 233 NPNAADSRAEAFSEEAKFFAESRLLQRDVQIILE 266
Score = 104 (41.7 bits), Expect = 3.5e-33, Sum P(2) = 3.5e-33
Identities = 31/99 (31%), Positives = 50/99 (50%)
Query: 363 TNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIG 422
T VPP + S A + G V V+SGD +I+ P+ E V LS++ P++G
Sbjct: 8 TPTVPPPAASSA-NPAVRRGLVKSVLSGDAVILQGQ--PHNGPPPEWTVYLSNVTAPRLG 64
Query: 423 NPRKDEKPAA----YAREAREFLRTRLIGRQVNVQMEYS 457
D A YA ++RE+LR +L+G+ V +++
Sbjct: 65 RRPTDSASATPDEPYAWDSREYLRQKLVGQFVTFVRDFT 103
Score = 71 (30.1 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 27/118 (22%), Positives = 55/118 (46%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVD-KFKNLIGSVFYPDGETAKDLAMELVENGLA 329
D PF A+ F R+L ++V+I ++ V K +N +++A L+ GL+
Sbjct: 397 DIPFMFQAREFLRKRLLGKKVQIQIDYVQPKSENFPEKTCATIKIGDQNIAEGLISRGLS 456
Query: 330 KYIEWSANMMEEDAKR-RLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVE 386
K + A+ ++ L AA+ A+K + ++ + + ++ I Q TG + +
Sbjct: 457 KVVRHRADDENRSSEYDTLLAAEANAEKGKKGLFADKTAEKKDTHRI--QEITGDLAK 512
Score = 58 (25.5 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 28/121 (23%), Positives = 52/121 (42%)
Query: 42 TLTLSSIITPRLARRGGLD---EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREF-GT 97
TL LS + P D E F+ +++ F + ++V ++ + N + F G+
Sbjct: 220 TLQLSGVRAPSTRNPNAADSRAEAFSEEAKFFAESRLLQRDVQIILE-STSN--QNFVGS 276
Query: 98 VILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAE 157
++ N+A ++ EG+AK + G + +L E QAK + L W +
Sbjct: 277 IVHPKGNIAESLLREGYAKCVDWSI--GLCTGGAQKLRDAERQAKEKRLRLWKSYQPTSS 334
Query: 158 A 158
A
Sbjct: 335 A 335
Score = 43 (20.2 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 307 SVFYPDGETAKDLAMELVENGLA 329
+V+Y G D+ L+ GLA
Sbjct: 850 TVYYDSGNKKVDIGKSLIAEGLA 872
Score = 37 (18.1 bits), Expect = 6.7e-22, Sum P(2) = 6.7e-22
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 970 SRDRQAALENLEKFQEEAK 988
+R+ AA E F EEAK
Sbjct: 231 TRNPNAADSRAEAFSEEAK 249
>POMBASE|SPCC645.08c [details] [associations]
symbol:snd1 "RNA-binding protein Snd1" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=NAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016442 "RNA-induced
silencing complex" evidence=IEA] [GO:0016788 "hydrolase activity,
acting on ester bonds" evidence=IEA] [GO:0031048 "chromatin
silencing by small RNA" evidence=NAS] InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS01123 PROSITE:PS01284 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 PomBase:SPCC645.08c GO:GO:0005829
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0016788
GO:GO:0031048 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
HOGENOM:HOG000173592 KO:K15979 OMA:IWKDYVA EMBL:AB108422 PIR:T41525
RefSeq:NP_588117.1 ProteinModelPortal:Q9Y7U7 STRING:Q9Y7U7
PRIDE:Q9Y7U7 EnsemblFungi:SPCC645.08c.1 GeneID:2539488
KEGG:spo:SPCC645.08c OrthoDB:EOG473T0D NextBio:20800650
Uniprot:Q9Y7U7
Length = 878
Score = 465 (168.7 bits), Expect = 9.8e-75, Sum P(3) = 9.8e-75
Identities = 139/483 (28%), Positives = 227/483 (46%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G NVA +VV G VI +R D +RS YD +S K+P +I +
Sbjct: 415 GTNVALMVVKSGYATVIRYRMDSVDRSPIYDFLIEAEKAAQEGRKGMWSGKKPAYENIVN 474
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
+ + ++ +R +L LQR+R++ ++E V+SG RF+ PKE C F+ +G+R P R
Sbjct: 475 ASESSLR-SRQYLSSLQRTRKLSVIIENVISGSRFRCFCPKENCYFMFACAGIRTPRTAR 533
Query: 655 NERYSNEAL----LLMRQKILQRDVEIEVETVDRTGTFLGSLWESR-TNVAVILLEAGLA 709
N++ E L + + +LQ D ++E+ +VD G FLG ++ + TN A+ LL GLA
Sbjct: 534 NDQEKGEPFAEESLSLAKSLLQHDAQVEILSVDNNGCFLGDIYVNHDTNFALKLLSQGLA 593
Query: 710 KLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQ--KE--VLK 765
Q + S E +AK QK+ +W +YV E+ + E + KE L
Sbjct: 594 WCQGYASQSNVQYSQY-HDTEAAAKEQKVGMWHDYVPPEKKAASTEKESENTVKEPIYLD 652
Query: 766 VVVTEILGGGKFYVQQVGD--QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSAD 823
+V+++I GKF Q +G Q++ ++ L SL P + G V A + D
Sbjct: 653 IVLSDIAEDGKFSFQIIGTGIQQLETLMSDLGSLKKSFKP---SEKINVGMNVAAISALD 709
Query: 824 NSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSL 883
N+ R ++ RE N +V DYG+ E +P+ + + + + P AQL L
Sbjct: 710 NAMYRGRVLRCDRE-----NQAADVLLYDYGSVEQIPFKNISSLPDTYTKLKPQAQLARL 764
Query: 884 AYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVA 943
+Y+++P +Y +A E N + LV + D +
Sbjct: 765 SYVQLPPPSSDYYEDARLVFRELAMN-----KGLVAKVDGHEGNVYSVTLYNPSDGS--- 816
Query: 944 VDAEISINTLMVQEGLARVERRKRWGSRDRQ-AALENLEKFQEEAKTARIGMWQYGD-IQ 1001
D IN +V G+A V +K+ ++ A+L LE+ Q+EA+ IG W YGD ++
Sbjct: 817 -DFSDCINAQLVALGMASVIPKKKTSHFEKDTASLNILEEHQQEARLNHIGFWVYGDPLE 875
Query: 1002 SDD 1004
+D
Sbjct: 876 YED 878
Score = 214 (80.4 bits), Expect = 9.8e-75, Sum P(3) = 9.8e-75
Identities = 67/234 (28%), Positives = 115/234 (49%)
Query: 16 VKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEPFAWDSREFLRKLC 75
+K SGDS I L N EK +L+ + PR R G DEPFA++++EF R+L
Sbjct: 9 IKYAQSGDSFNI--LIKDNAKKITEKQFSLAYVECPRFRREG--DEPFAFEAQEFSRRLV 64
Query: 76 IGKEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWAKVKEQGSQ-KGEA-SPFLAE 133
+G+ + Y +P RE+G + + ++A ++ EG AK++ + ++ +G + + +
Sbjct: 65 VGRPASVSTLYVIPTSKREYGRIRTSEFDLAESLLREGLAKLRPEATRNEGTSENSYFVS 124
Query: 134 LLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN-FNAMALLDANKGRPMQGIV 192
L ++ A+ LG W G ++ + + + +N N L A+KG+ + GIV
Sbjct: 125 LEEAQDHAQQYKLGIW----GPSDDVV-------VTEKANPANPAKFLKAHKGKKLNGIV 173
Query: 193 EQARDGSTLRV--YLLP-EFQFVQVFVAGXXXXXXXXXXXXXXDTDTE-ETNGD 242
E R+G +RV +L P + Q V + +AG T +E E GD
Sbjct: 174 ETIRNGDQVRVRLFLSPKQHQLVTISLAGVRCPRSTFTATSPEQTSSEQEPCGD 227
Score = 201 (75.8 bits), Expect = 9.8e-75, Sum P(3) = 9.8e-75
Identities = 64/192 (33%), Positives = 102/192 (53%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKN---LIGSVFYPDGETAKDLAMELVENGL 328
EP +AK F R+L R V V+E +D N +G+V +P G ++A L+ +GL
Sbjct: 223 EPCGDEAKQFVVTRLLQRNV--VIELLDLAPNGVSFLGNVLHPAG----NIATFLLSSGL 276
Query: 329 AKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVP--PQSNSKAIHDQNFTGKVVE 386
+ + + + + + L+ + +AK +RL +W N P NS ++ D ++ V
Sbjct: 277 GRVADNHISALGPETMQSLRTIERKAKISRLGIWKNISVSIPDINSLSLKD--YSAVVSR 334
Query: 387 VVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREAREFLRTRLI 446
V+S D + V D+ G E R+ LSSIR P+ N EK A Y EAREFLR ++I
Sbjct: 335 VISTDTLEVRKDN---G---VECRIQLSSIRHPRPSN----EKEAPYQLEAREFLRKKII 384
Query: 447 GRQVNVQMEYSR 458
G++V V +++ R
Sbjct: 385 GKRVQVSLDFIR 396
Score = 136 (52.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 62/212 (29%), Positives = 91/212 (42%)
Query: 12 YRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEPFAWDSREFL 71
Y A V V S D+L + + G E + LSSI PR + + P+ ++REFL
Sbjct: 328 YSAVVSRVISTDTLEV----RKDNGV--ECRIQLSSIRHPRPSNEK--EAPYQLEAREFL 379
Query: 72 RKLCIGKEVTFRVDYAVPNIGR----EFGTVILGD-KNVAMLVVSEGWAKVKEQGSQKGE 126
RK IGK V +D+ P TV L D NVA++VV G+A V +
Sbjct: 380 RKKIIGKRVQVSLDFIRPGQNDLPAINNCTVKLSDGTNVALMVVKSGYATVIRYRMDSVD 439
Query: 127 ASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGR 186
SP L+ E+ A+ G WS A E +I N S++ +++ + R
Sbjct: 440 RSPIYDFLIEAEKAAQEGRKGMWSGKKPAYE-NIVNASESSLRSRQYLSSL-----QRTR 493
Query: 187 PMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+ I+E GS R + E + AG
Sbjct: 494 KLSVIIENVISGSRFRCFCPKENCYFMFACAG 525
Score = 127 (49.8 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 51/185 (27%), Positives = 86/185 (46%)
Query: 634 LIPKETCSIAFSFSGVRCP-------------GRNERYSNEALLLMRQKILQRDVEIEVE 680
L PK+ + S +GVRCP E +EA + ++LQR+V IE+
Sbjct: 188 LSPKQHQLVTISLAGVRCPRSTFTATSPEQTSSEQEPCGDEAKQFVVTRLLQRNVVIELL 247
Query: 681 TVDRTG-TFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDS-HLLEQAEKSAKSQKL 738
+ G +FLG++ N+A LL +GL ++ + S P++ L E+ AK +L
Sbjct: 248 DLAPNGVSFLGNVLHPAGNIATFLLSSGLGRVADNHISALGPETMQSLRTIERKAKISRL 307
Query: 739 KIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLN 798
IW+N N +++ V +V+ T+ L K + Q ++S++ S N
Sbjct: 308 GIWKNISVSIPDINSLSLKDYSAVVSRVISTDTLEVRKDNGVECRIQ-LSSIRHPRPS-N 365
Query: 799 LQEAP 803
+EAP
Sbjct: 366 EKEAP 370
Score = 101 (40.6 bits), Expect = 5.2e-47, Sum P(3) = 5.2e-47
Identities = 54/207 (26%), Positives = 95/207 (45%)
Query: 271 DEPFALDAKYFTEMRVLNREVRI-VLEGVDKFKNLIGSVFYPDGETAK-DLAMELVENGL 328
DEPFA +A+ F+ V+ R + L + K G + T++ DLA L+ GL
Sbjct: 49 DEPFAFEAQEFSRRLVVGRPASVSTLYVIPTSKREYGRI-----RTSEFDLAESLLREGL 103
Query: 329 AKYI-EWSAN--MMEEDAKRRLKAADLQAKKTRLRMW--------TNYVPPQSNSKAI-- 375
AK E + N E L+ A A++ +L +W T P + +K +
Sbjct: 104 AKLRPEATRNEGTSENSYFVSLEEAQDHAQQYKLGIWGPSDDVVVTEKANPANPAKFLKA 163
Query: 376 HDQNFTGKVVEVV-SGDCIIVADDSIPYGNALAERRVNLSSIRCPK----IGNPRK---D 427
H +VE + +GD + V P + L ++L+ +RCP+ +P + +
Sbjct: 164 HKGKKLNGIVETIRNGDQVRVRLFLSPKQHQLVT--ISLAGVRCPRSTFTATSPEQTSSE 221
Query: 428 EKPAAYAREAREFLRTRLIGRQVNVQM 454
++P EA++F+ TRL+ R V +++
Sbjct: 222 QEPCG--DEAKQFVVTRLLQRNVVIEL 246
Score = 88 (36.0 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 34/164 (20%), Positives = 75/164 (45%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA ++ + +L + ++ + VD +G + Y + +T + A++L+ GLA
Sbjct: 540 EPFAEESLSLAKS-LLQHDAQVEILSVDNNGCFLGDI-YVNHDT--NFALKLLSQGLA-- 593
Query: 332 IEWSANMMEEDAKRRLKAADLQA--KKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVS 389
W + + + D +A K+ ++ MW +YVPP+ + + ++ V E +
Sbjct: 594 --WCQGYASQSNVQYSQYHDTEAAAKEQKVGMWHDYVPPEKKAASTEKES-ENTVKEPIY 650
Query: 390 GDCII--VADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPA 431
D ++ +A+D + + + +G+ +K KP+
Sbjct: 651 LDIVLSDIAEDG-KFSFQIIGTGIQQLETLMSDLGSLKKSFKPS 693
Score = 78 (32.5 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 40/159 (25%), Positives = 73/159 (45%)
Query: 620 AVVEYVLSGHRFKVLIPKET-CSIAFSFSGVRCPG-RNER---YSNEALLLMRQKILQRD 674
AVV V+S +V C I S +R P NE+ Y EA +R+KI+ +
Sbjct: 330 AVVSRVISTDTLEVRKDNGVECRI--QLSSIRHPRPSNEKEAPYQLEAREFLRKKIIGKR 387
Query: 675 VEIEVETVDRTGTFLGSL------WESRTNVAVILLEAGLAK-LQTSFGS-DRIPDSHLL 726
V++ ++ + L ++ TNVA++++++G A ++ S DR P L
Sbjct: 388 VQVSLDFIRPGQNDLPAINNCTVKLSDGTNVALMVVKSGYATVIRYRMDSVDRSPIYDFL 447
Query: 727 EQAEKSAKSQKLKIWENYVEG-EEVSNGAAVEGKQKEVL 764
+AEK+A+ + +W E + N + + ++ L
Sbjct: 448 IEAEKAAQEGRKGMWSGKKPAYENIVNASESSLRSRQYL 486
Score = 77 (32.2 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 389 SGDC--IIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREAREFLRTRLI 446
SGD I++ D++ + E++ +L+ + CP+ R+ ++P A+ EA+EF R ++
Sbjct: 14 SGDSFNILIKDNA----KKITEKQFSLAYVECPRFR--REGDEPFAF--EAQEFSRRLVV 65
Query: 447 GRQVNVQMEY 456
GR +V Y
Sbjct: 66 GRPASVSTLY 75
Score = 77 (32.2 bits), Expect = 8.1e-44, Sum P(2) = 8.1e-44
Identities = 32/146 (21%), Positives = 64/146 (43%)
Query: 16 VKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLA-------RRGGLDEPFAWDSR 68
V+ + +GD + + +P + T++L+ + PR + EP +++
Sbjct: 173 VETIRNGDQVRVRLFLSPKQH--QLVTISLAGVRCPRSTFTATSPEQTSSEQEPCGDEAK 230
Query: 69 EFLRKLCIGKEVTFRVDYAVPNIGREF-GTVILGDKNVAMLVVSEGWAKVKEQGSQKGEA 127
+F+ + + V + PN G F G V+ N+A ++S G +V + +
Sbjct: 231 QFVVTRLLQRNVVIELLDLAPN-GVSFLGNVLHPAGNIATFLLSSGLGRVAD--NHISAL 287
Query: 128 SPFLAELLR-LEEQAKLQGLGRWSKV 152
P + LR +E +AK+ LG W +
Sbjct: 288 GPETMQSLRTIERKAKISRLGIWKNI 313
Score = 54 (24.1 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 949 SINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDDEDPL 1008
+I T ++ GL RV S +++L + +AK +R+G+W+ + D + L
Sbjct: 266 NIATFLLSSGLGRVADNHI--SALGPETMQSLRTIERKAKISRLGIWKNISVSIPDINSL 323
Score = 49 (22.3 bits), Expect = 8.2e-59, Sum P(3) = 8.2e-59
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 536 PAGVNVAELVVSRGLGNVI-NH 556
PAG N+A ++S GLG V NH
Sbjct: 263 PAG-NIATFLLSSGLGRVADNH 283
Score = 37 (18.1 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 524 ASAVAQSNAAGQPAGVNVAELVVSRGLG-NVI 554
A++ Q+++ +P G + VV+R L NV+
Sbjct: 212 ATSPEQTSSEQEPCGDEAKQFVVTRLLQRNVV 243
>UNIPROTKB|F1SML4 [details] [associations]
symbol:SND1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002071 InterPro:IPR006021
InterPro:IPR016071 Pfam:PF00565 PROSITE:PS01284 PROSITE:PS50830
SMART:SM00318 GO:GO:0005739 GO:GO:0003676 GO:GO:0090305
GO:GO:0004518 Gene3D:2.40.50.90 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 EMBL:CU861978 EMBL:CU640389
EMBL:CU856688 Ensembl:ENSSSCT00000018062 OMA:XYRARVE Uniprot:F1SML4
Length = 594
Score = 307 (113.1 bits), Expect = 2.0e-73, Sum P(3) = 2.0e-73
Identities = 75/195 (38%), Positives = 123/195 (63%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L+++G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKDGFARC 296
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK RLR+W +YV P +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKDRRLRIWRDYVAPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 282 (104.3 bits), Expect = 2.0e-73, Sum P(3) = 2.0e-73
Identities = 79/219 (36%), Positives = 119/219 (54%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRR 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G + +P L EEQAK G WS+ G+ +IR+L + I + +F
Sbjct: 137 EGMRAN--NPEQNRLAECEEQAKAAKKGMWSE--GSGSQTIRDLKYT-IENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP++ V V ++G
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSG 225
Score = 281 (104.0 bits), Expect = 2.0e-73, Sum P(3) = 2.0e-73
Identities = 62/149 (41%), Positives = 88/149 (59%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 447 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 506
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 507 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 565
Query: 655 N--------ERYSNEALLLMRQKILQRDV 675
N E +S EA L ++ +LQR+V
Sbjct: 566 NLPGLVQEGEPFSEEATLFTKELVLQREV 594
Score = 161 (61.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 70/225 (31%), Positives = 97/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDE----------PF 63
A+V V + D++V+ N G KT+ LSSI PRL D+ P+
Sbjct: 345 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPY 398
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V VDY VP R TV +G N+A +VS+G
Sbjct: 399 MFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKG 458
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 459 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 513
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 514 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 557
Score = 147 (56.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 61/259 (23%), Positives = 111/259 (42%)
Query: 538 GVNVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDL 597
G N+AE +V+ GL R+ +N S+ I+DL
Sbjct: 120 GENIAESLVAEGLAT---RREGMRANNPEQNRLAECEEQAKAAKKGMWSEGSGSQTIRDL 176
Query: 598 TMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP----- 652
++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 177 KYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRRE 234
Query: 653 --GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGL 708
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+ G
Sbjct: 235 ADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLLKDGF 293
Query: 709 AKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVV 768
A+ + + L AE+ AK ++L+IW +YV + A ++ K K+ + V+
Sbjct: 294 ARCVDWSIAVYTRGAEKLRAAERFAKDRRLRIWRDYV-----APTANLDQKDKQFVAKVM 348
Query: 769 TEILGGGKFYVQ-QVGDQK 786
++L V+ GD K
Sbjct: 349 -QVLNADAIVVKLNSGDYK 366
Score = 133 (51.9 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 56/199 (28%), Positives = 85/199 (42%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 388
E AN E++ RL + QAK + MW+ S S+ I D +T V
Sbjct: 135 RREGMRANNPEQN---RLAECEEQAKAAKKGMWSE----GSGSQTIRDLKYTIENPRHFV 187
Query: 389 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 436
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 188 DSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAE 247
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 97 (39.2 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------P-RKDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPWA 79
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 59 (25.8 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 42 TLTLSSIITPRLARRG-GLD--EPFAWDSREFLRKLCIGKEVTFRVDYAV-PNIGREFGT 97
T+ LS I P R G + EPFA +++ F + ++V ++ NI GT
Sbjct: 220 TVMLSGIKCPTFRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNI---LGT 276
Query: 98 VILGDKNVAMLVVSEGWAK 116
++ + N+ L++ +G+A+
Sbjct: 277 ILHPNGNITELLLKDGFAR 295
Score = 50 (22.7 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 272 EPFALDAKYFTEMRVLNREV 291
EPF+ +A FT+ VL REV
Sbjct: 575 EPFSEEATLFTKELVLQREV 594
Score = 41 (19.5 bits), Expect = 2.6e-48, Sum P(3) = 2.6e-48
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 457
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 773
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 509
>UNIPROTKB|H7C597 [details] [associations]
symbol:SND1 "Staphylococcal nuclease domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016788 "hydrolase activity, acting on
ester bonds" evidence=IEA] InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR002999 GO:GO:0003676 GO:GO:0016788 Pfam:PF00567
Gene3D:2.40.50.90 SUPFAM:SSF50199 EMBL:AC073934 HGNC:HGNC:30646
ChiTaRS:SND1 EMBL:AC006529 EMBL:AC008039 EMBL:AC009181
ProteinModelPortal:H7C597 Ensembl:ENST00000486037 Bgee:H7C597
Uniprot:H7C597
Length = 231
Score = 259 (96.2 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 59/144 (40%), Positives = 83/144 (57%)
Query: 543 ELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDLTMAP 601
E +VS+GL VI +R D ++RS++YD +S KE P+ + D++
Sbjct: 1 EALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVADIS-GD 59
Query: 602 VKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GRN---- 655
+KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP RN
Sbjct: 60 TQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGARNLPGL 119
Query: 656 ----ERYSNEALLLMRQKILQRDV 675
E +S EA L ++ +LQR+V
Sbjct: 120 VQEGEPFSEEATLFTKELVLQREV 143
Score = 95 (38.5 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 739 KIWENYVEG--EEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQV--GDQKVASVQQQL 794
++W +Y E EEV + + V VTEI FYVQ V G Q + + + +
Sbjct: 142 EVWAHYEEQPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQ-LEKLMENM 200
Query: 795 ASLNLQEAPVIGAFNPKKGEIVLAQFSADNSW 826
+ PV G++ P++GE +A+F D W
Sbjct: 201 RNDIASHPPVEGSYAPRRGEFCIAKF-VDGEW 231
Score = 70 (29.7 bits), Expect = 9.6e-06, Sum P(3) = 9.6e-06
Identities = 31/110 (28%), Positives = 44/110 (40%)
Query: 109 VVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAI 168
+VS+G A V + S ELL E +A G G SK E I + +
Sbjct: 3 LVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS- 57
Query: 169 GDSSNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GD+ GR + +VE GS L++YL E + +AG
Sbjct: 58 GDTQKAKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 106
Score = 50 (22.7 bits), Expect = 9.6e-06, Sum P(3) = 9.6e-06
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 272 EPFALDAKYFTEMRVLNREV 291
EPF+ +A FT+ VL REV
Sbjct: 124 EPFSEEATLFTKELVLQREV 143
>UNIPROTKB|B7WPM2 [details] [associations]
symbol:TDRD1 "Tudor domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50865 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008270
Pfam:PF00567 SMART:SM00333 PROSITE:PS50304 EMBL:AC022023
IPI:IPI00440758 HGNC:HGNC:11712 HOVERGEN:HBG108555
HOGENOM:HOG000081819 ProteinModelPortal:B7WPM2 SMR:B7WPM2
STRING:B7WPM2 Ensembl:ENST00000369281 ArrayExpress:B7WPM2
Bgee:B7WPM2 Uniprot:B7WPM2
Length = 1075
Score = 195 (73.7 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 50/157 (31%), Positives = 85/157 (54%)
Query: 735 SQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQL 794
++++ IW + ++ + ++ K+ +K VTE G FYVQ + + + Q
Sbjct: 240 TKEIAIWAERIMFSDLRS---LQLKKTMEIKGTVTEFKHPGDFYVQLYSSEVLEYMNQLS 296
Query: 795 ASLNLQEAPVIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDY 853
ASL A V + P KGE+ +A+++ D +WNRA+I N V+ K V YIDY
Sbjct: 297 ASLKETYANVHEKDYIPVKGEVCIAKYTVDQTWNRAIIQN-----VDVQQKKAHVLYIDY 351
Query: 854 GNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPA 890
GN+E++P N++ ++ ++ PP A C +A + IPA
Sbjct: 352 GNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPA 387
>UNIPROTKB|H9KV62 [details] [associations]
symbol:TDRD1 "Tudor domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50865 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008270
Pfam:PF00567 SMART:SM00333 PROSITE:PS50304 EMBL:AC022023
HGNC:HGNC:11712 ProteinModelPortal:H9KV62 SMR:H9KV62
Ensembl:ENST00000369280 Bgee:H9KV62 Uniprot:H9KV62
Length = 1104
Score = 195 (73.7 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 50/157 (31%), Positives = 85/157 (54%)
Query: 735 SQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQL 794
++++ IW + ++ + ++ K+ +K VTE G FYVQ + + + Q
Sbjct: 240 TKEIAIWAERIMFSDLRS---LQLKKTMEIKGTVTEFKHPGDFYVQLYSSEVLEYMNQLS 296
Query: 795 ASLNLQEAPVIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDY 853
ASL A V + P KGE+ +A+++ D +WNRA+I N V+ K V YIDY
Sbjct: 297 ASLKETYANVHEKDYIPVKGEVCIAKYTVDQTWNRAIIQN-----VDVQQKKAHVLYIDY 351
Query: 854 GNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPA 890
GN+E++P N++ ++ ++ PP A C +A + IPA
Sbjct: 352 GNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPA 387
Score = 159 (61.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 57/185 (30%), Positives = 85/185 (45%)
Query: 767 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 825
VV I F+ QQ+ +K+A +Q L+ + P F P G+I AQFS D+
Sbjct: 499 VVAHIQTPEDFFCQQLQSGRKLAELQASLSKY-CDQLPPRSDFYPAIGDICCAQFSEDDQ 557
Query: 826 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 885
W RA ++ E ESV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 558 WYRASVLAYASE--ESVL----VGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAG 611
Query: 886 IKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVD 945
+K P+L + PEA + + N + + + +SS V+ V +D
Sbjct: 612 VK-PSL-GIWTPEAICLMKKLVQNKIITVKVVDKLENSSLVELIDKSETPHVSVSKVLLD 669
Query: 946 AEISI 950
A ++
Sbjct: 670 AGFAV 674
Score = 132 (51.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 60/253 (23%), Positives = 111/253 (43%)
Query: 646 FSGVRCP-----GRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLG-SLWESRTN- 698
F G+RC RN+ +S EA+ R ++ ++++ V+ T +G L + T
Sbjct: 823 FQGIRCQLADIQSRNKHWSEEAIT--RFQMCVAGIKLQARVVEVTENGIGVELTDLSTCY 880
Query: 699 ---VAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAA 755
++ +L++ L S D +P+ L+ + E Q L+ + + +
Sbjct: 881 PRIISDVLIDEHLVLKSASPHKD-LPNDRLVNKHELQVHVQGLQATSSAEQWK------T 933
Query: 756 VEGKQKEVLKVVVTEILGGGKFYVQQVG----DQKVASVQQQLASLNLQEAPVIGA-FNP 810
+E + ++ V EI+ FY G +K+ + +L L AP + P
Sbjct: 934 IELPVDKTIQANVLEIISPNLFYALPKGMPENQEKLCMLTAEL--LEYCNAPKSRPPYRP 991
Query: 811 KKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPS 870
+ G+ A++++D+ W RA+++ VE V Y DYGN E +P +++PI S
Sbjct: 992 RIGDACCAKYTSDDFWYRAVVLGTSDTDVE-------VLYADYGNIETLPLCRVQPITSS 1044
Query: 871 LSSTPPLAQLCSL 883
+ P CSL
Sbjct: 1045 HLALPFQIIRCSL 1057
Score = 50 (22.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 6 AAGGGWYRARVKAV-PSG 22
A G WYRA VK + P+G
Sbjct: 774 AGDGSWYRALVKEILPNG 791
Score = 40 (19.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 80 VTFRVDYAVPNIGREFGTVIL 100
VTF V+ +PN G+ V++
Sbjct: 421 VTFAVEVELPNSGKLLDHVLI 441
>UNIPROTKB|H9KV63 [details] [associations]
symbol:TDRD1 "Tudor domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50865 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008270
Pfam:PF00567 SMART:SM00333 PROSITE:PS50304 EMBL:AC022023
HGNC:HGNC:11712 ProteinModelPortal:H9KV63 SMR:H9KV63
Ensembl:ENST00000369282 Bgee:H9KV63 Uniprot:H9KV63
Length = 1113
Score = 195 (73.7 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 50/157 (31%), Positives = 85/157 (54%)
Query: 735 SQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQL 794
++++ IW + ++ + ++ K+ +K VTE G FYVQ + + + Q
Sbjct: 240 TKEIAIWAERIMFSDLRS---LQLKKTMEIKGTVTEFKHPGDFYVQLYSSEVLEYMNQLS 296
Query: 795 ASLNLQEAPVIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDY 853
ASL A V + P KGE+ +A+++ D +WNRA+I N V+ K V YIDY
Sbjct: 297 ASLKETYANVHEKDYIPVKGEVCIAKYTVDQTWNRAIIQN-----VDVQQKKAHVLYIDY 351
Query: 854 GNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPA 890
GN+E++P N++ ++ ++ PP A C +A + IPA
Sbjct: 352 GNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPA 387
Score = 159 (61.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 57/185 (30%), Positives = 85/185 (45%)
Query: 767 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 825
VV I F+ QQ+ +K+A +Q L+ + P F P G+I AQFS D+
Sbjct: 499 VVAHIQTPEDFFCQQLQSGRKLAELQASLSKY-CDQLPPRSDFYPAIGDICCAQFSEDDQ 557
Query: 826 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 885
W RA ++ E ESV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 558 WYRASVLAYASE--ESVL----VGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAG 611
Query: 886 IKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVD 945
+K P+L + PEA + + N + + + +SS V+ V +D
Sbjct: 612 VK-PSL-GIWTPEAICLMKKLVQNKIITVKVVDKLENSSLVELIDKSETPHVSVSKVLLD 669
Query: 946 AEISI 950
A ++
Sbjct: 670 AGFAV 674
Score = 132 (51.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 60/253 (23%), Positives = 111/253 (43%)
Query: 646 FSGVRCP-----GRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLG-SLWESRTN- 698
F G+RC RN+ +S EA+ R ++ ++++ V+ T +G L + T
Sbjct: 823 FQGIRCQLADIQSRNKHWSEEAIT--RFQMCVAGIKLQARVVEVTENGIGVELTDLSTCY 880
Query: 699 ---VAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAA 755
++ +L++ L S D +P+ L+ + E Q L+ + + +
Sbjct: 881 PRIISDVLIDEHLVLKSASPHKD-LPNDRLVNKHELQVHVQGLQATSSAEQWK------T 933
Query: 756 VEGKQKEVLKVVVTEILGGGKFYVQQVG----DQKVASVQQQLASLNLQEAPVIGA-FNP 810
+E + ++ V EI+ FY G +K+ + +L L AP + P
Sbjct: 934 IELPVDKTIQANVLEIISPNLFYALPKGMPENQEKLCMLTAEL--LEYCNAPKSRPPYRP 991
Query: 811 KKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPS 870
+ G+ A++++D+ W RA+++ VE V Y DYGN E +P +++PI S
Sbjct: 992 RIGDACCAKYTSDDFWYRAVVLGTSDTDVE-------VLYADYGNIETLPLCRVQPITSS 1044
Query: 871 LSSTPPLAQLCSL 883
+ P CSL
Sbjct: 1045 HLALPFQIIRCSL 1057
Score = 50 (22.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 6 AAGGGWYRARVKAV-PSG 22
A G WYRA VK + P+G
Sbjct: 774 AGDGSWYRALVKEILPNG 791
Score = 40 (19.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 80 VTFRVDYAVPNIGREFGTVIL 100
VTF V+ +PN G+ V++
Sbjct: 421 VTFAVEVELPNSGKLLDHVLI 441
>UNIPROTKB|Q9BXT4 [details] [associations]
symbol:TDRD1 "Tudor domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0033391
"chromatoid body" evidence=IEA] [GO:0043186 "P granule"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0031047
"gene silencing by RNA" evidence=ISS] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0034587 "piRNA
metabolic process" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=ISS] [GO:0007281 "germ cell development" evidence=ISS]
[GO:0071546 "pi-body" evidence=ISS] InterPro:IPR002893 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50865 InterPro:IPR002999 GO:GO:0007275
GO:GO:0007126 GO:GO:0046872 EMBL:CH471066 GO:GO:0008270
GO:GO:0007283 GO:GO:0007281 GO:GO:0031047 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 GO:GO:0071546
GO:GO:0034587 GO:GO:0033391 eggNOG:NOG267246 EMBL:AC022023
EMBL:AK122916 EMBL:AK304331 EMBL:BC035010 EMBL:BC063133
EMBL:AF285606 EMBL:AK024735 IPI:IPI00394796 IPI:IPI00440758
IPI:IPI00647142 IPI:IPI00908751 RefSeq:NP_942090.1
UniGene:Hs.333132 ProteinModelPortal:Q9BXT4 SMR:Q9BXT4
IntAct:Q9BXT4 MINT:MINT-7242011 STRING:Q9BXT4 PhosphoSite:Q9BXT4
DMDM:206729901 PRIDE:Q9BXT4 Ensembl:ENST00000251864 GeneID:56165
KEGG:hsa:56165 UCSC:uc001lbf.3 UCSC:uc001lbg.1 UCSC:uc001lbi.1
UCSC:uc010qsc.2 CTD:56165 GeneCards:GC10P115929 H-InvDB:HIX0009225
HGNC:HGNC:11712 HPA:HPA037729 HPA:HPA037730 MIM:605796
neXtProt:NX_Q9BXT4 PharmGKB:PA36430 HOVERGEN:HBG108555
InParanoid:Q9BXT4 OMA:VGYVDYG GenomeRNAi:56165 NextBio:61802
ArrayExpress:Q9BXT4 Bgee:Q9BXT4 CleanEx:HS_TDRD1
Genevestigator:Q9BXT4 GermOnline:ENSG00000095627 Uniprot:Q9BXT4
Length = 1180
Score = 195 (73.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 50/157 (31%), Positives = 85/157 (54%)
Query: 735 SQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQL 794
++++ IW + ++ + ++ K+ +K VTE G FYVQ + + + Q
Sbjct: 240 TKEIAIWAERIMFSDLRS---LQLKKTMEIKGTVTEFKHPGDFYVQLYSSEVLEYMNQLS 296
Query: 795 ASLNLQEAPVIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDY 853
ASL A V + P KGE+ +A+++ D +WNRA+I N V+ K V YIDY
Sbjct: 297 ASLKETYANVHEKDYIPVKGEVCIAKYTVDQTWNRAIIQN-----VDVQQKKAHVLYIDY 351
Query: 854 GNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPA 890
GN+E++P N++ ++ ++ PP A C +A + IPA
Sbjct: 352 GNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPA 387
Score = 159 (61.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 57/185 (30%), Positives = 85/185 (45%)
Query: 767 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 825
VV I F+ QQ+ +K+A +Q L+ + P F P G+I AQFS D+
Sbjct: 499 VVAHIQTPEDFFCQQLQSGRKLAELQASLSKY-CDQLPPRSDFYPAIGDICCAQFSEDDQ 557
Query: 826 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 885
W RA ++ E ESV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 558 WYRASVLAYASE--ESVL----VGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAG 611
Query: 886 IKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVD 945
+K P+L + PEA + + N + + + +SS V+ V +D
Sbjct: 612 VK-PSL-GIWTPEAICLMKKLVQNKIITVKVVDKLENSSLVELIDKSETPHVSVSKVLLD 669
Query: 946 AEISI 950
A ++
Sbjct: 670 AGFAV 674
Score = 132 (51.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 60/253 (23%), Positives = 111/253 (43%)
Query: 646 FSGVRCP-----GRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLG-SLWESRTN- 698
F G+RC RN+ +S EA+ R ++ ++++ V+ T +G L + T
Sbjct: 823 FQGIRCQLADIQSRNKHWSEEAIT--RFQMCVAGIKLQARVVEVTENGIGVELTDLSTCY 880
Query: 699 ---VAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAA 755
++ +L++ L S D +P+ L+ + E Q L+ + + +
Sbjct: 881 PRIISDVLIDEHLVLKSASPHKD-LPNDRLVNKHELQVHVQGLQATSSAEQWK------T 933
Query: 756 VEGKQKEVLKVVVTEILGGGKFYVQQVG----DQKVASVQQQLASLNLQEAPVIGA-FNP 810
+E + ++ V EI+ FY G +K+ + +L L AP + P
Sbjct: 934 IELPVDKTIQANVLEIISPNLFYALPKGMPENQEKLCMLTAEL--LEYCNAPKSRPPYRP 991
Query: 811 KKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPS 870
+ G+ A++++D+ W RA+++ VE V Y DYGN E +P +++PI S
Sbjct: 992 RIGDACCAKYTSDDFWYRAVVLGTSDTDVE-------VLYADYGNIETLPLCRVQPITSS 1044
Query: 871 LSSTPPLAQLCSL 883
+ P CSL
Sbjct: 1045 HLALPFQIIRCSL 1057
Score = 50 (22.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 6 AAGGGWYRARVKAV-PSG 22
A G WYRA VK + P+G
Sbjct: 774 AGDGSWYRALVKEILPNG 791
Score = 40 (19.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 80 VTFRVDYAVPNIGREFGTVIL 100
VTF V+ +PN G+ V++
Sbjct: 421 VTFAVEVELPNSGKLLDHVLI 441
>RGD|1306140 [details] [associations]
symbol:Tdrd1 "tudor domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO] [GO:0007281 "germ
cell development" evidence=IEA;ISO] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0031047
"gene silencing by RNA" evidence=IEA;ISO] [GO:0033391 "chromatoid
body" evidence=IEA;ISO] [GO:0034587 "piRNA metabolic process"
evidence=IEA;ISO] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=IEA;ISO] [GO:0043186 "P granule" evidence=ISO]
[GO:0071546 "pi-body" evidence=IEA;ISO] InterPro:IPR002893
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50865 InterPro:IPR002999
RGD:1306140 GO:GO:0046872 GO:GO:0008270 GO:GO:0007283 GO:GO:0007281
GO:GO:0031047 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 GO:GO:0071546 GO:GO:0034587 GO:GO:0033391
EMBL:CH473986 GeneTree:ENSGT00520000055580 CTD:56165 OMA:VGYVDYG
OrthoDB:EOG4C87RJ IPI:IPI00358529 RefSeq:NP_001099672.1
UniGene:Rn.156064 Ensembl:ENSRNOT00000023024 GeneID:292129
KEGG:rno:292129 UCSC:RGD:1306140 NextBio:633813 Uniprot:D4A3N0
Length = 1173
Score = 193 (73.0 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 46/134 (34%), Positives = 75/134 (55%)
Query: 759 KQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVI--GAFNPKKGEIV 816
K E+ K VTE G FYVQ + + + Q ASL A ++ + P KGE+
Sbjct: 255 KSMEI-KGTVTEFKHPGHFYVQLYSSEVLEYMNQLSASLKETYANMVPEDGYLPVKGEVC 313
Query: 817 LAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPP 876
+A+++ D +WNRA++ E V+ + K V YIDYGN+E++P +++ + S+S PP
Sbjct: 314 VAKYTVDQTWNRAVV-----EGVDVLQKKAHVLYIDYGNEEIIPVDRIHQLSRSISLFPP 368
Query: 877 LAQLCSLAYIKIPA 890
A C ++ + +PA
Sbjct: 369 SAIKCYVSGV-VPA 381
Score = 150 (57.9 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 49/134 (36%), Positives = 67/134 (50%)
Query: 767 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 825
VV I F+ QQ+ K+A +Q+ L+ P F P G++ AQFS D+
Sbjct: 493 VVAHIQTPEDFFCQQLQSGHKLAELQESLSEYCSHVTPR-SDFYPTIGDMCCAQFSEDDQ 551
Query: 826 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 885
W RA ++ E ESV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 552 WYRASVLAYASE--ESVL----VGYVDYGNFEILSLKRLCPIIPKLLDLPMQALNCVLAG 605
Query: 886 IKIPALEDEYGPEA 899
+K P+L + PEA
Sbjct: 606 VK-PSL-GMWTPEA 617
Score = 143 (55.4 bits), Expect = 9.1e-06, Sum P(3) = 9.1e-06
Identities = 65/234 (27%), Positives = 103/234 (44%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGS 717
++ EA+ +MR+ + R V + V V GT +L E L A A L + F
Sbjct: 613 WTPEAICVMRKAVQNRMVTVRV--VGMQGT--RALVELVDKSVAPHLSASKALLDSGFA- 667
Query: 718 DRIPDSHLLEQAEKSAKSQKLKIWENYVEGE-EVSNGAAVEGKQKEVLKVVVTEILGGGK 776
I + ++ SA++ + + VEG EV VE E + V+V + G+
Sbjct: 668 --IEEKDIVADKGSSARASNVPL---AVEGAVEVLEWTWVEFTVDETVDVMVCMMHSPGE 722
Query: 777 FYVQQVGD---QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVN 833
FY + D +K+ + + LA Q+ P F + G A F+ D +W RA++
Sbjct: 723 FYCHCLKDDALKKLDDLNKSLADYCAQKPP--NGFKAEVGRPCCACFAGDGNWYRALV-- 778
Query: 834 APREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIK 887
+E + S N K V ++DYGN E V ++L I P P C L I+
Sbjct: 779 --KEILPSGNVK--VHFVDYGNVEEVTTDQLHAIAPQFLLLPFQGMQCWLVDIQ 828
Score = 51 (23.0 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 2 ATPAAAGG--GWYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARR 56
+ PA G G + K +P+G+ + +LS N PP + S+ +TP +++
Sbjct: 80 SNPAGINGEVGGSKGDRKTLPTGNPV---SLSLGNNSPPNQVKTKPSNAVTPEKSKK 133
Score = 48 (22.0 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 24/87 (27%), Positives = 40/87 (45%)
Query: 281 FTEMRVLNREVRIVLEG-VDKFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMM 339
F+++R L + ++G V +FK+ G FY +++ +E + A E ANM+
Sbjct: 245 FSDLRSLQLRKSMEIKGTVTEFKHP-GH-FYVQLYSSE--VLEYMNQLSASLKETYANMV 300
Query: 340 EEDAKRRLKAADLQAKKTRLRMWTNYV 366
ED +K AK T + W V
Sbjct: 301 PEDGYLPVKGEVCVAKYTVDQTWNRAV 327
Score = 43 (20.2 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 11 WYRARVKAVPSGDSLVI 27
WYRA V A S +S+++
Sbjct: 552 WYRASVLAYASEESVLV 568
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 153 PGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIV 192
PG +E + R + IG N +L N G G+V
Sbjct: 455 PGTSEDTGRLTAENRIGAERNALVPTVLTLNVGDEFCGVV 494
>MGI|MGI:1933218 [details] [associations]
symbol:Tdrd1 "tudor domain containing 1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0031047
"gene silencing by RNA" evidence=IMP] [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0034587 "piRNA metabolic process" evidence=IMP]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0071546 "pi-body"
evidence=IDA] InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50865 InterPro:IPR002999 MGI:MGI:1933218 GO:GO:0007275
GO:GO:0007126 GO:GO:0046872 GO:GO:0008270 GO:GO:0007283
GO:GO:0007281 GO:GO:0031047 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 GO:GO:0071546 GO:GO:0034587
GO:GO:0033391 PDB:4B9W PDBsum:4B9W eggNOG:NOG267246
GeneTree:ENSGT00520000055580 CTD:56165 HOVERGEN:HBG108555
OMA:VGYVDYG EMBL:AB067571 EMBL:AB183526 EMBL:AB183527 EMBL:AB183528
EMBL:AB183529 EMBL:AK029806 EMBL:AF285591 EMBL:BC129954
EMBL:BC129955 IPI:IPI00320916 RefSeq:NP_001002238.1
RefSeq:NP_001002240.1 RefSeq:NP_001002241.1 RefSeq:NP_113564.2
UniGene:Mm.247541 PDB:4B9X PDBsum:4B9X ProteinModelPortal:Q99MV1
SMR:Q99MV1 DIP:DIP-48523N STRING:Q99MV1 PhosphoSite:Q99MV1
PaxDb:Q99MV1 PRIDE:Q99MV1 Ensembl:ENSMUST00000078723
Ensembl:ENSMUST00000111604 Ensembl:ENSMUST00000111606
Ensembl:ENSMUST00000121249 GeneID:83561 KEGG:mmu:83561
UCSC:uc008hzi.1 HOGENOM:HOG000081819 InParanoid:Q8CDN7
OrthoDB:EOG4C87RJ NextBio:350650 Bgee:Q99MV1 CleanEx:MM_TDRD1
Genevestigator:Q99MV1 GermOnline:ENSMUSG00000025081 Uniprot:Q99MV1
Length = 1172
Score = 183 (69.5 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 42/133 (31%), Positives = 71/133 (53%)
Query: 759 KQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVI--GAFNPKKGEIV 816
K+ +K VTE FY+Q + + ++ Q SL A V+ + P KGE+
Sbjct: 255 KKTMEIKGTVTEFKHPSNFYIQLYSSEVLENMNQLSTSLKETYANVVPEDGYLPVKGEVC 314
Query: 817 LAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPP 876
+A+++ D +WNRA++ + V+ + K V YIDYGN+E++P + + P+ L PP
Sbjct: 315 VAKYTVDQTWNRAIV-----QAVDVLQRKAHVLYIDYGNEEMIPIDSVHPLSRGLDLFPP 369
Query: 877 LAQLCSLAYIKIP 889
A C ++ + IP
Sbjct: 370 SAIKCCVSGV-IP 381
Score = 153 (58.9 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 51/144 (35%), Positives = 70/144 (48%)
Query: 767 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 825
VV I F+ QQ+ K+A +Q+ L+ P F P G++ AQFS D+
Sbjct: 494 VVAHIQTPEDFFCQQLQSGHKLAELQESLSEYCGHVIPR-SDFYPTIGDVCCAQFSEDDQ 552
Query: 826 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 885
W RA ++ E ESV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 553 WYRASVLAYASE--ESVL----VGYVDYGNFEILSLKRLCPIIPKLLDLPMQALNCVLAG 606
Query: 886 IKIPALEDEYGPEAAEFLNEHTYN 909
+K P+L + PEA + E N
Sbjct: 607 VK-PSL-GIWTPEAVCVMKEMVQN 628
Score = 133 (51.9 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 64/236 (27%), Positives = 102/236 (43%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGS 717
++ EA+ +M++ + R V + V V GT +L E + A A + + F
Sbjct: 614 WTPEAVCVMKEMVQNRMVTVRV--VGMLGT--RALVELIDKSVAPHVSASKALIDSGFA- 668
Query: 718 DRIPDSHLLEQAEKSAKSQKLKIWENYVEGE-EVSNGAAVEGKQKEVLKVVVTEILGGGK 776
I + + A+K + + +EG E VE E + VVV + G+
Sbjct: 669 --IKEKDV---ADKGSSMHTASV-PLAIEGPAEALEWTWVEFTVDETVDVVVCMMYSPGE 722
Query: 777 FYVQQVGD---QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVN 833
FY + D +K+ + Q LA Q+ P F + G A FS D +W RA++
Sbjct: 723 FYCHFLKDDALEKLDDLNQSLADYCAQKPP--NGFKAEIGRPCCAFFSGDGNWYRALV-- 778
Query: 834 APREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIP 889
+E + S N K V ++DYGN E V ++L+ I P P C L I+ P
Sbjct: 779 --KEILPSGNVK--VHFVDYGNVEEVTTDQLQAILPQFLLLPFQGMQCWLVDIQPP 830
Score = 53 (23.7 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 2 ATPAAAGG--GWYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARR 56
+ PA G G + K P+G+ ++ LS N PP + SS +TP +++
Sbjct: 80 SNPAVVNGEVGGSKGDRKPPPTGNP--VSPLSLGNSSPPNQVKTKPSSNVTPEKSKK 134
Score = 43 (20.2 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 11 WYRARVKAVPSGDSLVI 27
WYRA V A S +S+++
Sbjct: 553 WYRASVLAYASEESVLV 569
>UNIPROTKB|F1MZE7 [details] [associations]
symbol:TDRD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071546 "pi-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0033391
"chromatoid body" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR002893 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50865 InterPro:IPR002999 GO:GO:0046872
GO:GO:0008270 GO:GO:0007283 GO:GO:0007281 GO:GO:0031047
Pfam:PF00567 SMART:SM00333 PROSITE:PS50304 GO:GO:0043046
GO:GO:0071546 GO:GO:0034587 GO:GO:0033391
GeneTree:ENSGT00520000055580 OMA:VGYVDYG EMBL:DAAA02059266
IPI:IPI00712365 Ensembl:ENSBTAT00000009002 Uniprot:F1MZE7
Length = 1184
Score = 182 (69.1 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 45/129 (34%), Positives = 70/129 (54%)
Query: 764 LKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGAFN--PKKGEIVLAQFS 821
+K VTE G FYVQ + + + Q ASL A + P KGEI +A+++
Sbjct: 267 IKGTVTEFKHPGDFYVQLYSSEVLECMNQLSASLKETYANKAHEEDHVPVKGEICVAKYT 326
Query: 822 ADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLC 881
D +WNR +I + V+ + +V YIDYGN+E++P N++ ++ + PP A C
Sbjct: 327 VDQTWNRVII-----QDVDLLQKVAQVLYIDYGNEEVIPINRIHQLNRKIDLFPPCAIRC 381
Query: 882 SLAYIKIPA 890
S+A + IPA
Sbjct: 382 SVASV-IPA 389
Score = 160 (61.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 55/185 (29%), Positives = 83/185 (44%)
Query: 767 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 825
VV + F+ QQ+ +K+A +Q+ L + P F P G+I AQFS D+
Sbjct: 502 VVAHVQTPEDFFCQQLQSGRKLAELQRSLGEY-CSQVPPRSDFYPTIGDICCAQFSEDDQ 560
Query: 826 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 885
W RA ++ E ESV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 561 WYRASVLAYASE--ESVL----VGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAG 614
Query: 886 IKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVD 945
+K P+L + PEA + + N + + +SS VT ++
Sbjct: 615 VK-PSL-GIWTPEAVCLMKKIVQNKMITVNVVDKLENSSLVELTDRSVTPHISVTKALLN 672
Query: 946 AEISI 950
A ++
Sbjct: 673 AGFAV 677
>UNIPROTKB|I3LGS1 [details] [associations]
symbol:TDRD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR002893 Pfam:PF01753 PROSITE:PS50865 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008270 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GeneTree:ENSGT00520000055580 EMBL:CU019667
Ensembl:ENSSSCT00000027996 Uniprot:I3LGS1
Length = 896
Score = 175 (66.7 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 44/131 (33%), Positives = 72/131 (54%)
Query: 764 LKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGA----FNPKKGEIVLAQ 819
+K VTE FYVQ + V+ QL+S +L+E A + P KGE+ +A+
Sbjct: 79 IKGTVTEFKHPSDFYVQLYSSE-VSEYMNQLSS-SLKETYANKAHEEDYIPVKGEVCVAK 136
Query: 820 FSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQ 879
++ D +WNR +I + ++ + K +V YIDYGN+E +P N++ + ++ PP A
Sbjct: 137 YTVDQTWNRVLI-----QDLDVLQKKAQVLYIDYGNEERIPVNRIHKLSRNIDLFPPCAI 191
Query: 880 LCSLAYIKIPA 890
C +A + IPA
Sbjct: 192 KCFVASV-IPA 201
Score = 166 (63.5 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 57/181 (31%), Positives = 78/181 (43%)
Query: 767 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 825
VV I F+ QQ+ K+A +Q L+ + P F P G+I AQFS D
Sbjct: 319 VVAHIQTPEDFFCQQLQSGHKLAELQASLSQY-CSQVPPRSDFYPAIGDICCAQFSEDAQ 377
Query: 826 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 885
W RA ++ E D V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 378 WYRASVLAYASE------DSVLVGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAG 431
Query: 886 IKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVD 945
+K P+L + PEA + + N R + +SS VT V +D
Sbjct: 432 VK-PSL-GIWTPEAICLMKKIVQNKMITVRVADKLENSSLVELTDRSVTPHISVTQVLID 489
Query: 946 A 946
A
Sbjct: 490 A 490
>UNIPROTKB|F1Q1V6 [details] [associations]
symbol:TDRD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50865
InterPro:IPR002999 GO:GO:0046872 GO:GO:0008270 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GeneTree:ENSGT00520000055580
OMA:VGYVDYG EMBL:AAEX03015539 Ensembl:ENSCAFT00000017934
Uniprot:F1Q1V6
Length = 1169
Score = 176 (67.0 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 42/140 (30%), Positives = 74/140 (52%)
Query: 764 LKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGA--FNPKKGEIVLAQFS 821
+K VTE FYVQ + + + Q S A + + P KGE+ +A+++
Sbjct: 256 IKGTVTEFKHPSDFYVQLYSSEVLEYMNQLSRSFKETYANMTQEEDYIPVKGEVCVAKYT 315
Query: 822 ADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLC 881
D +WNR +I ++++ + K +V YIDYGN+E++P N++ ++ ++ PP A C
Sbjct: 316 VDQTWNRVII-----QEIDMLQKKAQVLYIDYGNEEIIPINRIHQLNRNIGLFPPCAIKC 370
Query: 882 SLAYIKIPALEDEYGPEAAE 901
+A + IPA E + E +
Sbjct: 371 FVASV-IPA-EGNWSNECVK 388
Score = 148 (57.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 49/134 (36%), Positives = 68/134 (50%)
Query: 767 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 825
VV I F+ QQ+ K+A +Q L+ Q +P F P G+I A+FS D+
Sbjct: 490 VVAHIQTPEDFFCQQLQSGHKLAELQASLSEYCGQVSPR-SDFYPTIGDICCARFSEDDQ 548
Query: 826 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 885
W RA ++ E +SV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 549 WYRASVLAYASE--QSVL----VGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAG 602
Query: 886 IKIPALEDEYGPEA 899
+K P+L + PEA
Sbjct: 603 VK-PSL-GIWTPEA 614
Score = 134 (52.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 58/262 (22%), Positives = 119/262 (45%)
Query: 634 LIPKETCSIAFSFSGVRC-----PGRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTF 688
+IP + + F G+RC RN+ ++ EA+ R ++ ++++ V+ TG
Sbjct: 804 MIPSKFLKLPFQ--GIRCWLVDIQPRNKHWTEEAIA--RFQMCVAGIKLQARVVEITGQG 859
Query: 689 LG-SLWESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG 747
LG L + T+ I+ + + + S P + +S L++ ++
Sbjct: 860 LGIKLTDLSTSYPRIINDVLIDEYLVLRTSS--PRKDMTNN--RSVGKYNLQVDVMGLQA 915
Query: 748 EEVSNG-AAVEGKQKEVLKVVVTEILGGGKFYV---QQVGDQKVASV--QQQLASLNLQE 801
++ +E + ++ + EI+ FY + GDQ+ ++ + L N Q+
Sbjct: 916 VSLAEQWRTIELPVNKTVQASILEIVSPHLFYALPSEMPGDQERLNILTAELLEYCNTQK 975
Query: 802 APVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPY 861
+ + ++ PK G++ A+++ D+ W RA+++ +V+ V Y DYGN E +P
Sbjct: 976 SQL--SYRPKIGDVCCAKYTNDDFWYRAIVLGTSDAEVK-------VLYADYGNLETLPL 1026
Query: 862 NKLRPIDPSLSSTPPLAQLCSL 883
++++PI S P CSL
Sbjct: 1027 SRVQPISISHLELPFQIIKCSL 1048
Score = 47 (21.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 80 VTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWA-KVKEQGSQKGEASP 129
VTF VD +P+ G+ +L D +++ G+ K K Q S+K A P
Sbjct: 412 VTFAVDVMLPSSGK-----LLDD-----VLIEMGYGLKPKAQNSKKQSADP 452
Score = 45 (20.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 6 AAGGGWYRARVKAV 19
A G WYRA VK +
Sbjct: 765 AGDGNWYRALVKEI 778
>UNIPROTKB|I3LKM6 [details] [associations]
symbol:TDRD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071546 "pi-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0033391
"chromatoid body" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR002893 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50865 InterPro:IPR002999 GO:GO:0046872
GO:GO:0008270 GO:GO:0007283 GO:GO:0007281 GO:GO:0031047
Pfam:PF00567 SMART:SM00333 PROSITE:PS50304 GO:GO:0043046
GO:GO:0071546 GO:GO:0034587 GO:GO:0033391
GeneTree:ENSGT00520000055580 OMA:VGYVDYG EMBL:CU019667
Ensembl:ENSSSCT00000023111 Uniprot:I3LKM6
Length = 1183
Score = 175 (66.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 44/131 (33%), Positives = 72/131 (54%)
Query: 764 LKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGA----FNPKKGEIVLAQ 819
+K VTE FYVQ + V+ QL+S +L+E A + P KGE+ +A+
Sbjct: 267 IKGTVTEFKHPSDFYVQLYSSE-VSEYMNQLSS-SLKETYANKAHEEDYIPVKGEVCVAK 324
Query: 820 FSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQ 879
++ D +WNR +I + ++ + K +V YIDYGN+E +P N++ + ++ PP A
Sbjct: 325 YTVDQTWNRVLI-----QDLDVLQKKAQVLYIDYGNEERIPVNRIHKLSRNIDLFPPCAI 379
Query: 880 LCSLAYIKIPA 890
C +A + IPA
Sbjct: 380 KCFVASV-IPA 389
Score = 169 (64.5 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 90/359 (25%), Positives = 148/359 (41%)
Query: 594 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPG 653
IQDL + KKA+ RIP + LS R L P C+I + V P
Sbjct: 336 IQDLDVLQ-KKAQVLYIDYGNEERIPVNRIHKLS--RNIDLFPP--CAIKCFVASV-IPA 389
Query: 654 RNERYSNEALLLMRQKILQRDVEIEVETV--DRTGTFLGSLWESRTNVAV--ILLEAGLA 709
+S++ + ++ +L++ +++ + + TF + + + + +L+E G
Sbjct: 390 EGN-WSSDCVRSIKSLLLEQCCSVKIVDILEEEVVTFAVDVMLTSSGKLLDHVLIEMGYG 448
Query: 710 -KLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVV 768
K + + DS L+ K K+ + + + + ++ E + VV
Sbjct: 449 LKPKGQNSKKQSADSGDLDDVGKMTAENKIVVDRSDLIPKVLTLNVGDE------FRGVV 502
Query: 769 TEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWN 827
I F+ QQ+ +K+A +Q L+ + P F P G+I AQFS D W
Sbjct: 503 AHIQTPEDFFCQQLQSGRKLAELQASLSQY-CSQVPPRSDFYPAIGDICCAQFSEDAQWY 561
Query: 828 RAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIK 887
RA ++ E D V Y+DYGN E++ +L PI P L P A C LA +K
Sbjct: 562 RASVLAYASE------DSVLVGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAGVK 615
Query: 888 IPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVDA 946
P+L + PEA + + N R + +SS VT V +DA
Sbjct: 616 -PSL-GIWTPEAICLMKKIVQNKMITVRVADKLENSSLVELTDRSVTPHISVTQVLIDA 672
Score = 47 (21.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 6 AAGGGWYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRG 57
AAG R K +P+G+ ++ L+ N PP+E S+ + P +++G
Sbjct: 96 AAGS---RGDRKMLPTGNP--VSPLNIGNNSPPKEINSKPSNNVPPAKSKKG 142
Score = 38 (18.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 22 GDSLVITALSNPNP------GPPREKT 42
GD LV +LS NP GPP T
Sbjct: 142 GDKLVENSLSINNPALFSSLGPPLRST 168
>UNIPROTKB|E1BWC3 [details] [associations]
symbol:E1BWC3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IEA]
[GO:0071546 "pi-body" evidence=IEA] InterPro:IPR002893 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50865 InterPro:IPR002999 GO:GO:0046872
GO:GO:0008270 GO:GO:0031047 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0071546 GO:GO:0034587 GO:GO:0033391
GeneTree:ENSGT00520000055580 OMA:VGYVDYG EMBL:AADN02030918
IPI:IPI00578444 Ensembl:ENSGALT00000014592 Uniprot:E1BWC3
Length = 1046
Score = 178 (67.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 86/314 (27%), Positives = 142/314 (45%)
Query: 625 VLSGHRFKVLIPK----ETCSIAFSFSGVRCPGRNERYSNEALLLMRQKILQRDVEIEVE 680
VL R + +IPK +I + +G++ P +++EA+ LM+Q L +D V+
Sbjct: 452 VLQPARLRPMIPKLMDLPAQAIRCTLAGIK-PLLGA-WTSEAISLMKQ--LVKDKVFTVK 507
Query: 681 TVDRTG-TFLGSLWESRT----NVAVILLEAGLAKLQTSFGSDRIPDSHLLEQA---EKS 732
VD+ + L ++ N++ L+E G A + S + + + + QA E +
Sbjct: 508 VVDKESYRCVVELTDASVIPEINISRCLIEKGCAT-EASRMTLQATEMGGVMQANALEDT 566
Query: 733 AKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQ 792
A +K K W + S+ AV+ V+V + G+FY Q ++ ++
Sbjct: 567 ANKKKCK-WSKF------SHKGAVD--------VIVCTLYSPGEFYCQIANSNELCALNS 611
Query: 793 QLASL--NLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFY 850
SL Q+ P F PKKGE A FS D +W RA++ N ++V V +
Sbjct: 612 LNKSLFEYCQKTPP-NVFKPKKGEPCCALFSDDGNWYRALVENIISDRVVQVR------F 664
Query: 851 IDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNS 910
+DYGN E VP + +R I S P C L+ IK PA ++ PEA + ++ T
Sbjct: 665 VDYGNVEEVPVDNMRQISSSFLELPFQGIKCWLSGIK-PA-GSKWNPEATKRFHKCTSGM 722
Query: 911 SNEFRALVEERDSS 924
+ R RD +
Sbjct: 723 KLQARITSFSRDGA 736
Score = 166 (63.5 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 63/206 (30%), Positives = 92/206 (44%)
Query: 717 SDRIPDSHLLEQAEKS-AKSQKLKIWENYVEG----EEVSNG--AAVEGKQKEVLKVVVT 769
S+++ L+ S +KS + W+ +V G E+ S G ++E + L V VT
Sbjct: 757 SEKLAVKEELQDKNTSPSKSDEKAEWKCHVGGITDKEKTSLGHWESIELAVDQTLSVCVT 816
Query: 770 EILGGGKFYVQQV-----GDQKVASVQQ-QLASLNLQEAPVIGAFNPKKGEIVLAQFSAD 823
E+ FYV GD+ + + + Q + +E P F PK GE A+FS D
Sbjct: 817 EVTSPDLFYVVPAYCKADGDKLLKQLTELQDYCKSCKEQP----FTPKLGEACCARFSGD 872
Query: 824 NSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSL 883
W RA+++ + VE V Y DYGN E VP + + PI S P CSL
Sbjct: 873 GRWYRAVVLKVSQSTVE-------VLYADYGNIETVPLSNVLPITDSFLKIPFQTITCSL 925
Query: 884 AYIKIPALEDEYGPEAAEFLNEHTYN 909
A IK + E+ P + L E N
Sbjct: 926 AAIK----KVEWSPLVLDTLKEMLLN 947
Score = 155 (59.6 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 56/200 (28%), Positives = 91/200 (45%)
Query: 762 EVLKVVVTEILGGGKFYVQQVG-DQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQF 820
+ VVV+ + F+ QQ+ +++A +Q L + P F P GE+ AQF
Sbjct: 362 DTFSVVVSHVQNPEDFFCQQIHIGRQLAELQGHLCEY-CNKLPSDPNFRPVSGELCCAQF 420
Query: 821 SADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQL 880
+ D+ W RA ++ E + V YIDYGN E++ +LRP+ P L P A
Sbjct: 421 TEDDVWYRAAVIAHASE------NNIVVGYIDYGNFEVLQPARLRPMIPKLMDLPAQAIR 474
Query: 881 CSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVT 940
C+LA IK P L + EA + + F V +++S +T
Sbjct: 475 CTLAGIK-PLL-GAWTSEAISLMKQLV--KDKVFTVKVVDKES---------YRCVVELT 521
Query: 941 LVAVDAEISINTLMVQEGLA 960
+V EI+I+ ++++G A
Sbjct: 522 DASVIPEINISRCLIEKGCA 541
Score = 50 (22.7 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 43/190 (22%), Positives = 78/190 (41%)
Query: 11 WYRARVKAVPSGDSLVITALSNPN---PGPPREKTLTLSSIITPRLARRGGLD--EPF-- 63
WYRA V A S +++V+ + N P R + + + P A R L +P
Sbjct: 426 WYRAAVIAHASENNIVVGYIDYGNFEVLQPARLRPMIPKLMDLPAQAIRCTLAGIKPLLG 485
Query: 64 AWDSR--EFLRKLCIGKEVTFRV-DYAVPNIGREFGTV-ILGDKNVAMLVVSEGWAKVKE 119
AW S +++L K T +V D E ++ + N++ ++ +G A
Sbjct: 486 AWTSEAISLMKQLVKDKVFTVKVVDKESYRCVVELTDASVIPEINISRCLIEKGCATEAS 545
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVP--GAAEASIRNL--PPSAIGDSSNFN 175
+ + + + + LE+ A + +WSK GA + + L P +N N
Sbjct: 546 RMTLQATEMGGVMQANALEDTANKKKC-KWSKFSHKGAVDVIVCTLYSPGEFYCQIANSN 604
Query: 176 AMALLDA-NK 184
+ L++ NK
Sbjct: 605 ELCALNSLNK 614
Score = 44 (20.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 356 KTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDS 399
K L WT+ + + D+ FT KVV+ S C++ D+
Sbjct: 481 KPLLGAWTSEAISLMK-QLVKDKVFTVKVVDKESYRCVVELTDA 523
Score = 40 (19.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 617 RIPAVVEYVLSGHRFKVLIPKETCSIAFSFS 647
R+P ++E VL+ FK ++ + S+ S
Sbjct: 110 RLPVLLEMVLTKEHFKKIMFSDLQSLGLKKS 140
Score = 39 (18.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 9 GGWYRARVKAVPSGDSLV 26
G WYRA V+ + S D +V
Sbjct: 644 GNWYRALVENIIS-DRVV 660
>UNIPROTKB|E1BWC2 [details] [associations]
symbol:E1BWC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50865
InterPro:IPR002999 GO:GO:0046872 GO:GO:0008270 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GeneTree:ENSGT00520000055580
EMBL:AADN02030918 IPI:IPI00589668 Ensembl:ENSGALT00000014593
Uniprot:E1BWC2
Length = 932
Score = 166 (63.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 63/206 (30%), Positives = 92/206 (44%)
Query: 717 SDRIPDSHLLEQAEKS-AKSQKLKIWENYVEG----EEVSNG--AAVEGKQKEVLKVVVT 769
S+++ L+ S +KS + W+ +V G E+ S G ++E + L V VT
Sbjct: 643 SEKLAVKEELQDKNTSPSKSDEKAEWKCHVGGITDKEKTSLGHWESIELAVDQTLSVCVT 702
Query: 770 EILGGGKFYVQQV-----GDQKVASVQQ-QLASLNLQEAPVIGAFNPKKGEIVLAQFSAD 823
E+ FYV GD+ + + + Q + +E P F PK GE A+FS D
Sbjct: 703 EVTSPDLFYVVPAYCKADGDKLLKQLTELQDYCKSCKEQP----FTPKLGEACCARFSGD 758
Query: 824 NSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSL 883
W RA+++ + VE V Y DYGN E VP + + PI S P CSL
Sbjct: 759 GRWYRAVVLKVSQSTVE-------VLYADYGNIETVPLSNVLPITDSFLKIPFQTITCSL 811
Query: 884 AYIKIPALEDEYGPEAAEFLNEHTYN 909
A IK + E+ P + L E N
Sbjct: 812 AAIK----KVEWSPLVLDTLKEMLLN 833
Score = 45 (20.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 347 LKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDS 399
L A K L WT+ + + D+ FT KVV+ S C++ D+
Sbjct: 415 LCCAQFTGIKPLLGAWTSEAISLMK-QLVKDKVFTVKVVDKESYRCVVELTDA 466
Score = 40 (19.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 617 RIPAVVEYVLSGHRFKVLIPKETCSIAFSFS 647
R+P ++E VL+ FK ++ + S+ S
Sbjct: 110 RLPVLLEMVLTKEHFKKIMFSDLQSLGLKKS 140
>ZFIN|ZDB-GENE-070803-1 [details] [associations]
symbol:tdrd1 "tudor domain containing 1" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030719 "P granule organization" evidence=IMP] [GO:0034584
"piRNA binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS] [GO:0043186 "P granule" evidence=ISS] [GO:0031047
"gene silencing by RNA" evidence=IEA;ISS] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0034587 "piRNA
metabolic process" evidence=ISS] [GO:0007281 "germ cell
development" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0007126 "meiosis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50865
InterPro:IPR002999 ZFIN:ZDB-GENE-070803-1 GO:GO:0046872
GO:GO:0008270 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0030719 GO:GO:0034584 GeneTree:ENSGT00520000055580 CTD:56165
EMBL:CR932360 IPI:IPI01016891 RefSeq:NP_001157500.1
UniGene:Dr.133744 Ensembl:ENSDART00000066249 GeneID:553522
KEGG:dre:553522 NextBio:20880267 Bgee:F1Q7S6 Uniprot:F1Q7S6
Length = 1176
Score = 157 (60.3 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 52/222 (23%), Positives = 92/222 (41%)
Query: 730 EKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVAS 789
E S +Q +I+ + + VS G+ ++G V ++ G F + ++ + S
Sbjct: 150 EISVDAQPKRIYRRDLHKKVVSKGSEIKG--------TVIDLRNPGMFSIHCQCEEMIES 201
Query: 790 VQQQLASLNLQEAPVIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEV 848
+++ L + P+ GE+ +FS D +W RA I + V+ V
Sbjct: 202 LKKITQQLQKTYCSSFAQEYKPEVGELCAVKFSLDQNWYRAEI-----QAVDVARKTAGV 256
Query: 849 FYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTY 908
FYID+GN+E V + +RP+ ++ + PP A C +A +K P L + E + +
Sbjct: 257 FYIDFGNEENVALDHIRPLSENIDAVPPFALQCCIAGVK-P-LTGSWTGECCIAVRQLIA 314
Query: 909 NSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVDAEISI 950
S F L D HV+ +D +I
Sbjct: 315 GKSLTFTVLDIMNDGDLLAVDSLVSTLGKHVSTFLIDQSYAI 356
Score = 147 (56.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 44/143 (30%), Positives = 62/143 (43%)
Query: 767 VVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSW 826
VVT + + Q++ + + Q ++ F P G + + FS DN W
Sbjct: 411 VVTHLQSPSEILCQKLENASIIQQLQMNLRVHCSNTAASDDFRPAPGTVCCSLFSEDNQW 470
Query: 827 NRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYI 886
RA ++ S D+ V YID+GN E V N+LRPI L + A CSLA I
Sbjct: 471 YRAKVL------AYSSEDRVCVGYIDFGNSEEVELNRLRPISKELLALATQAIPCSLAGI 524
Query: 887 KIPALEDEYGPEAAEFLNEHTYN 909
K +L D + EA L N
Sbjct: 525 K--SLTDTWSDEAVLMLKHLVCN 545
Score = 44 (20.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 30/112 (26%), Positives = 50/112 (44%)
Query: 71 LRKLCIGKEVTFRVDYAVPNIGREFG--TVI--LGDKNVAMLVVSEGWAKVKEQGSQKGE 126
+R+L GK +TF V + N G +++ LG K+V+ ++ + +A +KE K +
Sbjct: 309 VRQLIAGKSLTFTV-LDIMNDGDLLAVDSLVSTLG-KHVSTFLIDQSYA-IKEDVPVKTQ 365
Query: 127 ASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLP-PSAIGDSSNFNAM 177
+ LL A + R+S G E S P P G +F A+
Sbjct: 366 TEHSINSLLT----ASFENFKRFSG--GKNENSEARPPEPLTQGVGDSFTAV 411
>UNIPROTKB|I3LDE1 [details] [associations]
symbol:LOC100521234 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016788 "hydrolase activity, acting on ester
bonds" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006021 InterPro:IPR016071 Pfam:PF00565
GO:GO:0003676 GO:GO:0016788 Gene3D:2.40.50.90 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 EMBL:CU655914 RefSeq:XP_003134759.1
UniGene:Ssc.11771 Ensembl:ENSSSCT00000027805 GeneID:100521234
KEGG:ssc:100521234 Uniprot:I3LDE1
Length = 137
Score = 124 (48.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 938 HVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQY 997
HVTL D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+Y
Sbjct: 66 HVTLQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRY 122
Query: 998 GDIQSDDED 1006
GD ++DD D
Sbjct: 123 GDFRADDAD 131
>UNIPROTKB|A9CPT4 [details] [associations]
symbol:tdrd1 "Tudor domain-containing protein 1"
species:8090 "Oryzias latipes" [GO:0007281 "germ cell development"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0031047 "gene silencing by RNA" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=ISS]
[GO:0043186 "P granule" evidence=ISS;IDA] [GO:0071546 "pi-body"
evidence=ISS] InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50865 InterPro:IPR002999 GO:GO:0007275 GO:GO:0007126
GO:GO:0046872 GO:GO:0008270 GO:GO:0007283 GO:GO:0007281
GO:GO:0031047 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 GO:GO:0071546 GO:GO:0034587 eggNOG:NOG267246
CTD:56165 EMBL:AB306932 RefSeq:NP_001116401.1 UniGene:Ola.20092
ProteinModelPortal:A9CPT4 GeneID:100144383 HOVERGEN:HBG108556
Uniprot:A9CPT4
Length = 1133
Score = 151 (58.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/137 (37%), Positives = 65/137 (47%)
Query: 766 VVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQE----APVIGAFNPKKGEIVLAQFS 821
VVV+ F VQ+V + A V Q L L L+E F P G + AQFS
Sbjct: 392 VVVSHFQSPTDFIVQKVEN---AGVIQDL-QLKLREHCSGVETQQDFRPAPGTVCCAQFS 447
Query: 822 ADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLC 881
D W RA ++ EK V YID+GN E V N LRPI P+L + P A C
Sbjct: 448 EDKQWYRAQVLAYSTEKSVCVG------YIDFGNSEEVDLNHLRPISPALLALPKQAISC 501
Query: 882 SLAYIKIPALEDEYGPE 898
LA ++ P +ED + E
Sbjct: 502 ILAGVQ-P-VEDSWSEE 516
Score = 127 (49.8 bits), Expect = 0.00056, P = 0.00056
Identities = 47/181 (25%), Positives = 80/181 (44%)
Query: 721 PDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQ 780
PDS + E S Q++ + + + + + GA ++G V E G+F+
Sbjct: 127 PDSDNVR--EDSLNIQRIYLKD--LNATKYTKGAEIQG--------AVVEFNSPGRFFFL 174
Query: 781 QVGDQKVASVQQQLASLNLQEAP--VIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPRE 837
D KV + + Q+ P +G + P GE+ QFS D +W R +I +
Sbjct: 175 PE-DPKVMEALMSITA-EXQKXPSSTVGTPYVPCVGEVCSVQFSXDLNWYRGLIQTLAAD 232
Query: 838 KVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGP 897
+ + V YIDYGN E VP +++P++ + P A C A + +P + D +
Sbjct: 233 QKTA-----HVLYIDYGNAENVPVERIKPLNIATKPYCPCAMECQXAGV-VPIV-DSWST 285
Query: 898 E 898
E
Sbjct: 286 E 286
>POMBASE|SPBC19F8.04c [details] [associations]
symbol:SPBC19F8.04c "nuclease" species:4896
"Schizosaccharomyces pombe" [GO:0004518 "nuclease activity"
evidence=ISM] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISS;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006021 InterPro:IPR016071 Pfam:PF00565
PROSITE:PS01123 PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318
PomBase:SPBC19F8.04c GO:GO:0016021 GO:GO:0005739 GO:GO:0016020
GO:GO:0046872 EMBL:CU329671 GO:GO:0003676 GO:GO:0004519
GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525 HOGENOM:HOG000212133
SUPFAM:SSF50199 OrthoDB:EOG4QG0PC PIR:T39827 RefSeq:NP_596346.1
ProteinModelPortal:O60168 EnsemblFungi:SPBC19F8.04c.1
GeneID:2540556 KEGG:spo:SPBC19F8.04c OMA:QTLHIRL NextBio:20801682
Uniprot:O60168
Length = 230
Score = 128 (50.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSV-FYPDGET--AKDLAMELVENG 327
++P+AL+AK F ++ ++ VRI+ +D++ L+ V +YP KD+ +++ G
Sbjct: 120 EQPYALEAKEFLHNKLYHKSVRIIPLKIDRYARLVAGVQYYPIPHFFWKKDIGPQMIRKG 179
Query: 328 LAKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWT 363
LA E S + K L A ++ AKK +L +W+
Sbjct: 180 LAVVYEGSDGVFCPTKKECLLALEIVAKKKKLSLWS 215
Score = 41 (19.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 173 NFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLP 207
N+ + ++ K + M G V + DG R Y P
Sbjct: 42 NYLNNSTVENRKYKTMFGYVTRVGDGDNFRFYHTP 76
>UNIPROTKB|F1NF10 [details] [associations]
symbol:F1NF10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0043186 "P
granule" evidence=IEA] InterPro:IPR002999 GO:GO:0005783
Pfam:PF00567 SMART:SM00333 PROSITE:PS50304 GO:GO:0043186
GeneTree:ENSGT00520000055580 EMBL:AADN02018214 IPI:IPI00593229
Ensembl:ENSGALT00000026969 OMA:CEFVEEV Uniprot:F1NF10
Length = 717
Score = 138 (53.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 63/275 (22%), Positives = 122/275 (44%)
Query: 635 IPKETCSIAF-SFSGVRCPGRN-ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL 692
IP + I V+C + EA ++ +L+R ++ V + G L L
Sbjct: 261 IPSDAHDILLLPMQAVKCSLADVANVPQEATAWFKKAVLERQLKAIVVAKESGGKLLIEL 320
Query: 693 WESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSN 752
++ + + G ++S R D +LL+ A + ++ +L EG+ SN
Sbjct: 321 FDGESKNCRSKAQGGE---RSSKMHVREKDVNLLQPAAERERASELLA----SEGKVSSN 373
Query: 753 GAAVEGK-QKEVLKVVVTEILGGGKFYVQQVGDQ-KVASVQQQLASLNLQEAPVIGAFNP 810
A+ K ++E+ ++ E+ FYVQ D+ ++ S+ ++L + P G
Sbjct: 374 KDALLNKVEEEMQSLLSVEMDAESDFYVQLASDEAQLHSISERLKDEMPAKIPC-GELL- 431
Query: 811 KKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPS 870
+ G+++ A +S D+ W RA++ +EK + + YIDYGN +V +++ +
Sbjct: 432 QAGDLICALYSDDSLWYRAVV----KEKAS--DHLISIQYIDYGNTSVVDVDQVCRLPED 485
Query: 871 LSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNE 905
L S P + C L ++ D + +AA + E
Sbjct: 486 LESIPAIGVHCFLGGLECKRSTD-WAEKAALYFTE 519
>TIGR_CMR|GSU_1199 [details] [associations]
symbol:GSU_1199 "nuclease, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006308 "DNA catabolic process" evidence=ISS]
InterPro:IPR006021 InterPro:IPR016071 Pfam:PF00565 PROSITE:PS50830
SMART:SM00318 GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0016788 Gene3D:2.40.50.90 SUPFAM:SSF50199 HSSP:P00644
HOGENOM:HOG000017398 RefSeq:NP_952252.1 ProteinModelPortal:Q74DW6
GeneID:2688309 KEGG:gsu:GSU1199 PATRIC:22025168 OMA:AWVYERY
ProtClustDB:CLSK743113 BioCyc:GSUL243231:GH27-1200-MONOMER
Uniprot:Q74DW6
Length = 187
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 39/135 (28%), Positives = 61/135 (45%)
Query: 15 RVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEPFAWDSREFLRKL 74
RV V GD++VI P P R L I TP ++ +P+ ++ + L L
Sbjct: 42 RVITVKDGDTVVIAPAGGGKPYPCR-----LYGIDTPETPKKRKQGQPYGQEAADELSSL 96
Query: 75 CIGKEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAEL 134
+GKEV + R+ GT+ + NV + +V G+A Q ++ P ++E
Sbjct: 97 VLGKEVKVLLT-GDTTYNRQVGTIEVDGVNVNLEMVRRGYAWAYVQYLRR----PHVSEY 151
Query: 135 LRLEEQAKLQGLGRW 149
EE A+ Q LG W
Sbjct: 152 REAEEDARRQRLGLW 166
>UNIPROTKB|E1BGM7 [details] [associations]
symbol:TDRD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043186 "P granule" evidence=IEA] [GO:0007281 "germ
cell development" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR006021 InterPro:IPR002999 GO:GO:0005783 GO:GO:0003676
GO:GO:0007281 GO:GO:0016788 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 Gene3D:2.40.50.90 GO:GO:0043186
GeneTree:ENSGT00520000055580 CTD:221400 OMA:VYVSHIN
EMBL:DAAA02055162 IPI:IPI00695927 RefSeq:NP_001179259.1
UniGene:Bt.57460 PRIDE:E1BGM7 Ensembl:ENSBTAT00000013158
GeneID:512705 KEGG:bta:512705 NextBio:20870522 Uniprot:E1BGM7
Length = 2092
Score = 131 (51.2 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 60/226 (26%), Positives = 96/226 (42%)
Query: 694 ESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLK--IWENYVEGEEVS 751
+S T ++ L + + S D L AE S K+ KL+ + E + +
Sbjct: 1224 QSSTKTNLVTLHQDSVGNKNNQVSPLTTDKKLESSAEPSLKATKLEASLSERKLR-DSCD 1282
Query: 752 NGAAV---EGKQKEVLK-----VVVTEILGGGKFYVQQVGDQKVASVQQQLASLN-LQEA 802
G + E +K ++ V V+ I FYVQ D+ A + LN +
Sbjct: 1283 KGLPLKISEFPKKAIMPGFKTTVYVSHINDLSDFYVQLTEDE--AEIDHLSERLNDTRTR 1340
Query: 803 PVIGAFNP-KKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPY 861
P A P ++G+++ A F DN W RA +V P+ +ND V +IDYGN +V
Sbjct: 1341 PEYYAGPPLQRGDVICAVFPEDNLWYRA-VVKEPQ-----LNDLLSVQFIDYGNVSVVHT 1394
Query: 862 NKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHT 907
NK+ +D P L CSL +P + + E + ++ T
Sbjct: 1395 NKIGKLDRVNVLLPGLCIPCSLKGCGVPGILNH--KEVMHYFSQRT 1438
Score = 69 (29.3 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 656 ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRT---NVAVILLEAGLAKLQ 712
E +S EA+ ++ +L +++ I V + L ESRT N++ ++ +AG AK Q
Sbjct: 610 ENWSQEAISFFKKTVLHKELVIHVLDKQDNQYIIEILDESRTGEENISKVMAQAGFAKYQ 669
Score = 37 (18.1 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 6/23 (26%), Positives = 15/23 (65%)
Query: 891 LEDEYGPEAAEFLNEHTYNSSNE 913
L DE+G A + ++ +T++ ++
Sbjct: 1458 LADEHGIIAEDMVSRYTFSEKSQ 1480
>UNIPROTKB|O60522 [details] [associations]
symbol:TDRD6 "Tudor domain-containing protein 6"
species:9606 "Homo sapiens" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0007281 "germ cell development" evidence=IEA]
[GO:0043186 "P granule" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] InterPro:IPR002999 GO:GO:0005783
GO:GO:0007275 GO:GO:0007283 GO:GO:0007281 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0033391 GO:GO:0043186
EMBL:AL591242 EMBL:AK125838 EMBL:AK131455 EMBL:BX648686
EMBL:AF039442 IPI:IPI00030153 IPI:IPI00954510 RefSeq:NP_001010870.1
RefSeq:NP_001161831.1 UniGene:Hs.656983 ProteinModelPortal:O60522
SMR:O60522 STRING:O60522 PaxDb:O60522 PRIDE:O60522
Ensembl:ENST00000316081 Ensembl:ENST00000544460 GeneID:221400
KEGG:hsa:221400 UCSC:uc003oyj.3 CTD:221400 GeneCards:GC06P046702
H-InvDB:HIX0025021 HGNC:HGNC:21339 HPA:HPA035710 MIM:611200
neXtProt:NX_O60522 PharmGKB:PA134945900 eggNOG:NOG327358
HOGENOM:HOG000154540 HOVERGEN:HBG059095 InParanoid:O60522
OMA:VYVSHIN OrthoDB:EOG4N04D2 GenomeRNAi:221400 NextBio:91317
ArrayExpress:O60522 Bgee:O60522 CleanEx:HS_TDRD6
Genevestigator:O60522 GermOnline:ENSG00000180113 Uniprot:O60522
Length = 2096
Score = 140 (54.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 766 VVVTEILGGGKFYVQQVGDQ-KVASVQQQLASLNLQEAPVIGAFNP-KKGEIVLAQFSAD 823
V V+ I FYVQ + D+ +++ + ++L S+ + +G P ++G+++ A F D
Sbjct: 1309 VYVSHINDLSDFYVQLIEDEAEISHLSERLNSVKTRPEYYVGP--PLQRGDMICAVFPED 1366
Query: 824 NSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSL 883
N W RA+I K + ND V +IDYGN +V NK+ +D + P L CSL
Sbjct: 1367 NLWYRAVI------KEQQPNDLLSVQFIDYGNVSVVHTNKIGRLDLVNAILPGLCIHCSL 1420
Query: 884 AYIKIP 889
++P
Sbjct: 1421 QGFEVP 1426
Score = 46 (21.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 59 LDEPFAWDSREFLRKLCIGKEVTFRV----DYA-VPNIGREFGTVILGDKNVAMLVVSEG 113
L + ++ ++ F +K + KE+ + D+ V I E T G++N++ ++ G
Sbjct: 608 LGKTWSQEAVSFFKKTVLHKELVIHILDKQDHQYVIEILDESRT---GEENISKVIAQAG 664
Query: 114 WAKVKE 119
+AK +E
Sbjct: 665 YAKYQE 670
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.133 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1020 935 0.00092 122 3 11 22 0.43 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 623 (66 KB)
Total size of DFA: 405 KB (2196 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 77.93u 0.09s 78.02t Elapsed: 00:00:04
Total cpu time: 77.96u 0.09s 78.05t Elapsed: 00:00:04
Start: Tue May 21 21:44:36 2013 End: Tue May 21 21:44:40 2013