BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001724
(1020 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B2GUN4|MARF1_XENTR Meiosis arrest female protein 1 homolog OS=Xenopus tropicalis
GN=marf1 PE=2 SV=1
Length = 1681
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 52 VSVWWDFENCNLPAGVNAFKVAHTITAAIRANGIKGPVTITAFGDVVQMSRANQEV---L 108
+ V+WD ENC++P+G +A T+ IR KG F V +S+ N+EV L
Sbjct: 340 IGVFWDIENCSVPSGRSAV----TVVKRIRERLFKGHRE-AEFICVCDISKENKEVIEEL 394
Query: 109 SSTGINIAHVPHGGKNSADRSLLVDLMYWVSQNPPPAHLFLISGDRDFASVLHRLRM-NN 167
++ + +AH+ KN+AD L L + + PA + L+S D +FA L LR ++
Sbjct: 395 NNCQVTVAHINATAKNAADDKLRQSLRRFADTHTSPATVVLVSTDVNFALELSDLRHRHS 454
Query: 168 YNILLASRESASNVLCSAASVMWNWDSLL 196
++I+L + AS L A + +++ +
Sbjct: 455 FHIILIHKNQASEALLHHAHELIHFEEFI 483
>sp|Q8BJ34|MARF1_MOUSE Meiosis arrest female protein 1 OS=Mus musculus GN=Marf1 PE=1 SV=3
Length = 1730
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 52 VSVWWDFENCNLPAGVNAFKVAHTITAAIRANGIKGPVTITAFGDVVQMSRANQEV---L 108
+ V+WD ENC++P+G + A T+ IR +G F V +S+ N+EV L
Sbjct: 352 IGVFWDIENCSVPSG----RSATTVVQRIREKFFRGHRE-AEFICVCDISKENKEVIQEL 406
Query: 109 SSTGINIAHVPHGGKNSADRSLLVDLMYWVSQNPPPAHLFLISGDRDFASVLHRLRM-NN 167
++ + +AH+ KN+AD L L + + + PA + L+S D +FA L LR +
Sbjct: 407 NNCQVTVAHINATAKNAADDKLRQSLRRFANTHTAPATVVLVSTDVNFALELSDLRHRHG 466
Query: 168 YNILLASRESASNVLCSAASVMWNWDSLL 196
++I+L + AS L A+ + ++ +
Sbjct: 467 FHIILVHKNQASEALLHHANQLIRFEEFI 495
>sp|Q8VIG2|MARF1_RAT Meiosis arrest female protein 1 OS=Rattus norvegicus GN=Marf1 PE=1
SV=2
Length = 1735
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 52 VSVWWDFENCNLPAGVNAFKVAHTITAAIRANGIKGPVTITAFGDVVQMSRANQEV---L 108
+ V+WD ENC++P+G + A T+ IR +G F V +S+ N+EV L
Sbjct: 351 IGVFWDIENCSVPSG----RSATTVVQRIREKFFRGHRE-AEFICVCDISKENKEVIQEL 405
Query: 109 SSTGINIAHVPHGGKNSADRSLLVDLMYWVSQNPPPAHLFLISGDRDFASVLHRLRM-NN 167
++ + +AH+ KN+AD L L + + + PA + L+S D +FA L LR +
Sbjct: 406 NNCQVTVAHINATAKNAADDKLRQSLRRFANTHTAPATVVLVSTDVNFALELSDLRHRHG 465
Query: 168 YNILLASRESASNVLCSAASVMWNWDSLL 196
++I+L + AS L A+ + ++ +
Sbjct: 466 FHIILVHKNQASEALLHHANQLIRFEEFI 494
>sp|Q9Y4F3|MARF1_HUMAN Meiosis arrest female protein 1 OS=Homo sapiens GN=KIAA0430 PE=1
SV=6
Length = 1742
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 52 VSVWWDFENCNLPAGVNAFKVAHTITAAIRANGIKGPVTITAFGDVVQMSRANQEV---L 108
+ V+WD ENC++P+G + A + IR KG F V +S+ N+EV L
Sbjct: 353 IGVFWDIENCSVPSG----RSATAVVQRIREKFFKGHRE-AEFICVCDISKENKEVIQEL 407
Query: 109 SSTGINIAHVPHGGKNSADRSLLVDLMYWVSQNPPPAHLFLISGDRDFASVLHRLRM-NN 167
++ + +AH+ KN+AD L L + + + PA + L+S D +FA L LR +
Sbjct: 408 NNCQVTVAHINATAKNAADDKLRQSLRRFANTHTAPATVVLVSTDVNFALELSDLRHRHG 467
Query: 168 YNILLASRESASNVLCSAASVMWNWDSLL 196
++I+L + AS L A+ + ++ +
Sbjct: 468 FHIILVHKNQASEALLHHANELIRFEEFI 496
>sp|E1BP74|MARF1_BOVIN Meiosis arrest female protein 1 OS=Bos taurus GN=MARF1 PE=3 SV=2
Length = 1742
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 52 VSVWWDFENCNLPAGVNAFKVAHTITAAIRANGIKGPVTITAFGDVVQMSRANQEV---L 108
+ V+WD ENC++P+G + A + IR KG F V +S+ N+EV L
Sbjct: 351 IGVFWDIENCSVPSG----RSATAVVQRIREKFFKGHRE-AEFICVCDISKENKEVIQEL 405
Query: 109 SSTGINIAHVPHGGKNSADRSLLVDLMYWVSQNPPPAHLFLISGDRDFASVLHRLRM-NN 167
++ + +AH+ KN+AD L L + + + PA + L+S D +FA L LR +
Sbjct: 406 NNCQVTVAHINATAKNAADDKLRQSLRRFANTHTAPATVVLVSTDVNFALELSDLRHRHG 465
Query: 168 YNILLASRESASNVLCSAASVMWNWDSLL 196
++I+L + AS L A+ + ++ +
Sbjct: 466 FHIILVHKNQASEALLHHANELIRFEEFI 494
>sp|E1BZ85|MARF1_CHICK Meiosis arrest female protein 1 homolog OS=Gallus gallus GN=MARF1
PE=3 SV=1
Length = 1741
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 52 VSVWWDFENCNLPAGVNAFKVAHTITAAIRANGIKGPVTITAFGDVVQMSRANQEV---L 108
+ V+WD ENC++P G +A V I R KG F V +S+ N+EV L
Sbjct: 345 IGVFWDIENCSVPTGRSAVAVVQRI----REKFFKGHRE-AEFICVCDISKENKEVIQEL 399
Query: 109 SSTGINIAHVPHGGKNSADRSLLVDLMYWVSQNPPPAHLFLISGDRDFASVLHRLRM-NN 167
++ + +AH+ KN+AD L L + + PA + L+S D +FA L LR +
Sbjct: 400 NNCQVTVAHINATAKNAADDKLRQSLRRFADTHTAPATVVLVSTDVNFALELSDLRHRHG 459
Query: 168 YNILLASRESASNVLCSAASVMWNWDSLL 196
+ I+L + AS L A + ++ +
Sbjct: 460 FRIILVHKNQASEALLHHAHELVCFEEFI 488
>sp|Q93WU4|SPP3A_ARATH Probable sucrose-phosphatase 3a OS=Arabidopsis thaliana GN=SPP3A
PE=2 SV=2
Length = 425
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 10/154 (6%)
Query: 431 NVSSPVAVQEDEPHVLKQDPVNEVVFFKKIWIRWFGGKNGDSDIKSQHIPEKCSDSGDIS 490
NVS + + H +P +EVV F + RW G+ SD Q++ S G
Sbjct: 266 NVSPRDVMDTENFHGESLNPAHEVVQFYLFYERWRCGEVEKSDKYLQNLKSLSSPLGIFV 325
Query: 491 QKISKKRP------EKPLAYGDGKKKK--VEEKNIRSP--TQDDDLAESVQGKKTAKSAH 540
++P E YGDGK+KK + N+ S + D LA+ V+ + +
Sbjct: 326 HPSGVEKPIHEWIDEMENLYGDGKEKKFRIWLDNVTSSHISSDTWLAKFVKHELSEGKVR 385
Query: 541 ACGEKSTMSAGVLSQIVNWCKFRRSRPDSDSLSD 574
+C K +S Q + W +S D S D
Sbjct: 386 SCSTKVLLSYKEEKQRLTWMHIHQSWLDESSSDD 419
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.129 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 404,528,774
Number of Sequences: 539616
Number of extensions: 18435873
Number of successful extensions: 47177
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 210
Number of HSP's that attempted gapping in prelim test: 46220
Number of HSP's gapped (non-prelim): 966
length of query: 1020
length of database: 191,569,459
effective HSP length: 128
effective length of query: 892
effective length of database: 122,498,611
effective search space: 109268761012
effective search space used: 109268761012
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)