Your job contains 1 sequence.
>001729
MGPSSPTSSCSSSYSSPFTSPEFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVP
QFLLAENMEPILCTQPRRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKT
AGVLLDEMRDRGLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATAD
ITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRY
CSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLS
SFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFW
DVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLR
LQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFY
GRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPILHPFGDDALFAEYTGCY
FGGDGNTRLLTGRKEMVIMGNLCAFQFWQHVFKDKQRLDHLQQVLKFDETKVTASLLPKI
EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYDPYEFEHTCLLNC
DPPRDMDPLAADNEHLGPSFEAKKCVAVPFVAPNQFQSNNVAEKLASIIKEIRVQYVEDV
SGNQDKAVNGSETPGEAPLCVYFINGSCNRGTGCPFSHSLQAKRPACKFFYSLQGCRNGD
SCIFSHDLGQPVLPSSSFTCLPEDGVANAASLLRLFPTSSDGSILLLDDTDMHFSANLAC
LYDPSRIISTTCLSDSAICDTSLAGIRILWGLCHSLKTVISEAGDNPIPWKEVKCVLWYP
SLESYSENLESQKTLMQNFFEHLAIRMLADALYDTRVIITMNNIKFAQLQVEKLARDSFF
FLSESFPFDEMSFGELSDTVNTKRPMLVSRAISYVFDLHPPTDFQFGDYAAVLHRCLRDN
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001729
(1020 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043413 - symbol:AT2G47680 species:3702 "Arabi... 3175 0. 1
FB|FBgn0032883 - symbol:CG9323 species:7227 "Drosophila m... 276 7.3e-41 3
UNIPROTKB|E1C388 - symbol:DHX29 "Uncharacterized protein"... 268 1.1e-40 2
UNIPROTKB|F1S9V4 - symbol:TDRD9 "Uncharacterized protein"... 439 4.4e-39 2
UNIPROTKB|Q8NDG6 - symbol:TDRD9 "Putative ATP-dependent R... 440 8.0e-39 2
MGI|MGI:1921941 - symbol:Tdrd9 "tudor domain containing 9... 424 2.0e-38 2
UNIPROTKB|F1MNA1 - symbol:TDRD9 "Uncharacterized protein"... 433 3.0e-38 2
RGD|1306942 - symbol:Tdrd9 "tudor domain containing 9" sp... 427 4.0e-38 2
ZFIN|ZDB-GENE-090313-193 - symbol:tdrd9 "tudor domain con... 436 7.3e-38 4
UNIPROTKB|C3XYZ4 - symbol:BRAFLDRAFT_65715 "Putative unch... 441 1.2e-37 1
MGI|MGI:1918973 - symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) bo... 277 2.6e-36 2
ZFIN|ZDB-GENE-070912-171 - symbol:dhx9 "DEAH (Asp-Glu-Ala... 436 2.6e-36 2
UNIPROTKB|J3KR71 - symbol:DHX34 "Probable ATP-dependent R... 278 6.6e-36 2
ZFIN|ZDB-GENE-061207-30 - symbol:dhx34 "DEAH (Asp-Glu-Ala... 285 1.3e-35 2
POMBASE|SPCC895.09c - symbol:ucp12 "ATP-dependent RNA hel... 263 1.8e-35 2
WB|WBGene00004355 - symbol:rha-1 species:6239 "Caenorhabd... 269 2.1e-35 2
CGD|CAL0005664 - symbol:orf19.6818 species:5476 "Candida ... 418 3.4e-35 1
UNIPROTKB|Q5ADM3 - symbol:CaO19.14110 "Putative uncharact... 418 3.4e-35 1
UNIPROTKB|E2RTK4 - symbol:DHX34 "Uncharacterized protein"... 275 4.7e-35 2
UNIPROTKB|E2RTK2 - symbol:DHX34 "Uncharacterized protein"... 275 5.1e-35 2
TAIR|locus:2052841 - symbol:HVT1 "helicase in vascular ti... 239 5.4e-35 2
UNIPROTKB|Q14147 - symbol:DHX34 "Probable ATP-dependent R... 278 5.8e-35 2
UNIPROTKB|E1BJ90 - symbol:DHX34 "Uncharacterized protein"... 279 7.4e-35 2
UNIPROTKB|E1C550 - symbol:DHX36 "Uncharacterized protein"... 248 1.3e-34 2
UNIPROTKB|F6V8H1 - symbol:DHX36 "Uncharacterized protein"... 241 3.2e-34 2
CGD|CAL0002969 - symbol:orf19.107 species:5476 "Candida a... 278 3.8e-34 2
DICTYBASE|DDB_G0267516 - symbol:dhx57 "RWD domain-contain... 253 4.5e-34 2
TAIR|locus:2009200 - symbol:NIH "nuclear DEIH-boxhelicase... 253 7.1e-34 3
UNIPROTKB|F1RLY9 - symbol:DHX34 "Uncharacterized protein"... 277 8.4e-34 2
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 262 2.0e-33 3
UNIPROTKB|I3LHZ6 - symbol:DHX9 "Uncharacterized protein" ... 416 5.5e-33 3
UNIPROTKB|Q05B79 - symbol:DHX36 "Uncharacterized protein"... 240 6.9e-33 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 259 1.7e-32 3
UNIPROTKB|G4MZR9 - symbol:MGG_07059 "Pre-mRNA-splicing fa... 393 1.8e-32 1
FB|FBgn0030246 - symbol:CG1582 species:7227 "Drosophila m... 241 2.2e-32 2
TAIR|locus:2038796 - symbol:AT2G01130 species:3702 "Arabi... 247 2.3e-32 2
RGD|1308767 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box po... 242 2.4e-32 3
MGI|MGI:1919412 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) bo... 242 3.1e-32 3
UNIPROTKB|E7EWK3 - symbol:DHX36 "Probable ATP-dependent R... 240 4.6e-32 3
UNIPROTKB|F1NS70 - symbol:YTHDC2 "Uncharacterized protein... 242 4.9e-32 2
ZFIN|ZDB-GENE-050419-20 - symbol:si:dkey-119o24.1 "si:dke... 240 7.6e-32 3
FB|FBgn0030833 - symbol:CG8915 species:7227 "Drosophila m... 384 8.7e-32 1
UNIPROTKB|Q9H2U1 - symbol:DHX36 "Probable ATP-dependent R... 240 1.4e-31 3
ZFIN|ZDB-GENE-030131-4078 - symbol:dhx57 "DEAH (Asp-Glu-A... 239 1.6e-31 2
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 263 1.7e-31 2
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 263 2.2e-31 3
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 247 2.4e-31 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 247 2.4e-31 2
SGD|S000004411 - symbol:YLR419W "Putative helicase with l... 392 2.6e-31 2
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 252 3.6e-31 2
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 252 3.6e-31 2
TAIR|locus:2008144 - symbol:AT1G48650 species:3702 "Arabi... 230 4.6e-31 2
UNIPROTKB|E2QX71 - symbol:DHX57 "Uncharacterized protein"... 236 8.0e-31 2
DICTYBASE|DDB_G0275313 - symbol:dhx9 "ATP-dependent RNA h... 378 8.0e-31 1
UNIPROTKB|J9PAM3 - symbol:YTHDC2 "Uncharacterized protein... 235 1.1e-30 2
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 238 1.9e-30 3
FB|FBgn0003483 - symbol:spn-E "spindle E" species:7227 "D... 382 1.9e-30 2
UNIPROTKB|Q6P158 - symbol:DHX57 "Putative ATP-dependent R... 234 2.1e-30 2
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 238 2.3e-30 3
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 240 3.0e-30 3
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 234 3.4e-30 2
TAIR|locus:504954904 - symbol:ABO6 "ABA overly sensitive ... 237 3.4e-30 2
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 240 3.6e-30 3
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 252 3.8e-30 3
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 256 4.2e-30 3
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 249 4.4e-30 2
UNIPROTKB|F1MNU7 - symbol:YTHDC2 "Uncharacterized protein... 235 5.1e-30 3
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 228 6.8e-30 3
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 241 7.4e-30 3
POMBASE|SPAC20H4.09 - symbol:SPAC20H4.09 "ATP-dependent R... 257 8.6e-30 3
UNIPROTKB|F1N1A2 - symbol:DHX57 "Uncharacterized protein"... 228 1.2e-29 2
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 232 1.2e-29 3
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 233 1.4e-29 3
TAIR|locus:2196265 - symbol:AT1G58060 species:3702 "Arabi... 221 1.4e-29 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 256 1.8e-29 2
UNIPROTKB|E2QZR7 - symbol:YTHDC2 "Uncharacterized protein... 235 2.3e-29 3
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 239 2.3e-29 3
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 233 2.4e-29 2
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 252 3.5e-29 3
MGI|MGI:2448561 - symbol:Ythdc2 "YTH domain containing 2"... 235 3.6e-29 3
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 238 3.9e-29 3
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 236 4.1e-29 3
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 232 4.3e-29 3
UNIPROTKB|Q9H6S0 - symbol:YTHDC2 "Probable ATP-dependent ... 235 4.4e-29 3
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 232 4.5e-29 3
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 229 7.0e-29 3
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 243 7.6e-29 3
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 261 7.9e-29 3
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 227 8.3e-29 3
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 218 9.4e-29 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 238 1.2e-28 2
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 254 1.3e-28 3
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 254 1.3e-28 3
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 238 1.6e-28 3
TAIR|locus:2196255 - symbol:AT1G58050 species:3702 "Arabi... 231 1.8e-28 3
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 211 2.8e-28 3
UNIPROTKB|F1P1F4 - symbol:DHX30 "Putative ATP-dependent R... 217 3.2e-28 3
UNIPROTKB|E1C9G0 - symbol:DHX57 "Uncharacterized protein"... 235 3.3e-28 2
UNIPROTKB|F1M8G5 - symbol:Dhx57 "Protein Dhx57" species:1... 227 4.0e-28 3
UNIPROTKB|F1LSC4 - symbol:Dhx57 "Protein Dhx57" species:1... 227 4.6e-28 3
WARNING: Descriptions of 226 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2043413 [details] [associations]
symbol:AT2G47680 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0019243 "methylglyoxal catabolic process to D-lactate"
evidence=RCA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 GO:GO:0005524
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AC005309 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 EMBL:AB493597
IPI:IPI00519204 PIR:C84918 PIR:T00416 RefSeq:NP_182290.1
UniGene:At.36329 ProteinModelPortal:O22243 SMR:O22243 PaxDb:O22243
PRIDE:O22243 EnsemblPlants:AT2G47680.1 GeneID:819381
KEGG:ath:AT2G47680 GeneFarm:1818 TAIR:At2g47680
HOGENOM:HOG000082976 InParanoid:O22243 OMA:AYVIDSC PhylomeDB:O22243
ProtClustDB:CLSN2683720 Genevestigator:O22243 GO:GO:0008026
Uniprot:O22243
Length = 1015
Score = 3175 (1122.7 bits), Expect = 0., P = 0.
Identities = 613/998 (61%), Positives = 754/998 (75%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFXXXXXXXX 87
+M+++ +I++K+LENRVTLIVGE GCGKSSQVPQFLL NM PILCTQPRRF
Sbjct: 28 IMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAPILCTQPRRFAVVAVAKM 87
Query: 88 XXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVH 147
RN +LGGE+GYHIGHSK L+E SKI+FKTAGVLLDEM D+GLNALKYKVIILDEVH
Sbjct: 88 VAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEMLDKGLNALKYKVIILDEVH 147
Query: 148 ERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIPSTNQ 207
ERSVESD NDLRVVLMSATADIT+YRDYF++LGRGERVEV+AIPS +Q
Sbjct: 148 ERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKELGRGERVEVVAIPSPDQ 207
Query: 208 RTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLH 267
RTIFQRRV YLEQV LLGV +S+LS+ YC GPSPS A+ EIKPE+ LIHDL+L+
Sbjct: 208 RTIFQRRVLYLEQVAGLLGV----SSDLSA--YCPGPSPSSADTEIKPELQNLIHDLILY 261
Query: 268 IHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSH 327
IH+ E DIEKSILVFLPTYY+LEQQ+H ++P + F+VHILH S+DTEQAL AMKIC+S
Sbjct: 262 IHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFFASFEVHILHRSIDTEQALAAMKICRSR 321
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD +RK D+ +LVWVS+SQAEQRRGRTG
Sbjct: 322 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQRRGRTG 381
Query: 388 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 447
RTCDG+VYRLV +FF LE+HE P+I ICC ES+AI+D LL KA+DP
Sbjct: 382 RTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHICCTESRAINDANALLAKAMDP 441
Query: 448 PYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRXXXXXXXXXXXXXXXXKFGEIGMLR 507
P P+VV DAL +L +AL+K SPRGRYEPTFYGR KFGE+GMLR
Sbjct: 442 PDPDVVDDALRMLLSIQALRK-SPRGRYEPTFYGRLLASFPLSFDASILVVKFGEMGMLR 500
Query: 508 EGILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQF 567
+GILLG+LMDT PLPI HPFGDD+LF EY YFGG + + GR+EMV+M N CAFQF
Sbjct: 501 QGILLGVLMDTLPLPIHHPFGDDSLFLEYVDHYFGG--SKTISGGRREMVLMANFCAFQF 558
Query: 568 WQHVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILN 627
WQ VFKDK RL++L+Q+L ++ K + P+IE+EWC H + QSS +HVSELYED L+
Sbjct: 559 WQRVFKDKHRLENLKQLLSKEKDKDLKLMFPEIEKEWCDFHNIAQSSFYHVSELYEDTLS 618
Query: 628 AVHRFRPKFLGTSNGLPTYYDPYEFEHTCLLNCDPPRDMDPLAADNEHLGPSFEAKKCVA 687
+ HRFRP+F+ +S+ PTYY+PYEF+HTC + C P D + D ++ P E +KCV+
Sbjct: 619 SFHRFRPQFISSSDSQPTYYNPYEFDHTCYIECQPSEDKYLHSEDVDNNQPPPEVRKCVS 678
Query: 688 VPFVAPNQFQSNNVAEKLASIIKEIRVQYVEDVSGNQDKAVNGSETP--GEAPLCVYFIN 745
VPFV PN FQ+N +AE +ASIIKEIR Q S N A+ + GEAP+CVYF+N
Sbjct: 679 VPFVPPNAFQANAIAENMASIIKEIRTQCTPSESDNGHGALEPEDYVEYGEAPVCVYFLN 738
Query: 746 GSCNRGTGCPFSHSLQAKRPACKFFYSLQGCRNGDSCIFSHDLGQPV---LPSSSFTCLP 802
G CNRG C F+H+LQ+ RPACKFF S QGCRNG+SC+FSH + + LP CLP
Sbjct: 739 GYCNRGGQCTFTHTLQSTRPACKFFASSQGCRNGESCLFSHAMRRRTTSYLPPPQ--CLP 796
Query: 803 EDGVANAASLLRLFPTSSDGSILLLDDTDMHFSANLACLYDPSRIISTTCLSDSAICDTS 862
E+ ++ + LL LFPTSS+G IL+ DD+DMHF++++A Y RI+ST+ S++ CD+S
Sbjct: 797 EEDGSSTSPLLDLFPTSSEGCILVFDDSDMHFTSSIANRYPSWRILSTSSSSETLFCDSS 856
Query: 863 LAGIRILWGLCHSLKTVISEAG-DNPIPWKEVKCVLWYPSLESYSENLESQKTLMQNFFE 921
LA RI WGL H +T+IS+AG +NPIPW EVKCVLW+ + +SY++ E QKT++QNFFE
Sbjct: 857 LADTRIFWGLNHPYQTIISKAGRENPIPWNEVKCVLWFLNPDSYADTPEKQKTILQNFFE 916
Query: 922 HLAIRMLADALYDTRVIITMNNIKFAQLQVEKLARDSFFFLSESFPFDEMSFGELSDTVN 981
H+AIR+L D LY RV++TMNN++F+ LQVEKLAR+SFFFL ESFP D SFG DT+
Sbjct: 917 HMAIRLLGDKLYKIRVVLTMNNVRFSLLQVEKLARESFFFLGESFPHDSESFGAFQDTLT 976
Query: 982 TKRPMLVSRAISYVFDLHPPTDFQFGDYAAVLHRCLRD 1019
++PMLVSR ISYVF+LHPP+D QFG+Y ++L + L +
Sbjct: 977 IQKPMLVSRPISYVFNLHPPSDIQFGNYTSLLRKSLHN 1014
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 276 (102.2 bits), Expect = 7.3e-41, Sum P(3) = 7.3e-41
Identities = 73/184 (39%), Positives = 97/184 (52%)
Query: 29 MSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXX 81
M + I++ V EN+V LIVG TGCGK++QVPQ LL + + I+CTQPRR
Sbjct: 156 MKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRRISA 215
Query: 82 XXXXXXXXXGRNCE-LGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYK 139
R CE LG VGY I S+ ER+ I + T GVLL +++ L
Sbjct: 216 IAIAEWVSYER-CESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLMH-NLS 273
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEV 199
V+ILDE+HERSVE+D DL+V+LMSAT + DYF + R+E
Sbjct: 274 VLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMF-RIEG 332
Query: 200 LAIP 203
+ P
Sbjct: 333 VMFP 336
Score = 256 (95.2 bits), Expect = 7.3e-41, Sum P(3) = 7.3e-41
Identities = 77/227 (33%), Positives = 120/227 (52%)
Query: 261 IHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM-KPLSSF---FKVHI----LHSSV 312
I DLV +I +NE E +ILVFLP Y + Q ++++ KP +S ++ H+ LHS +
Sbjct: 409 IADLVYYICENEP--EGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLM 466
Query: 313 DT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAEL 371
+ EQ + + RKVI++T IAE+SVTI V YVI+S R+ +D+ I S +
Sbjct: 467 QSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDE 526
Query: 372 VWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAES 431
VWV+++ +QRRGR GR G Y L +++ ++D P I I +
Sbjct: 527 VWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESI---ILSLKL 583
Query: 432 KAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRGRY 475
I DP LQ ++ P PE + ++LL AL + ++P G +
Sbjct: 584 LHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMH 630
Score = 42 (19.8 bits), Expect = 7.3e-41, Sum P(3) = 7.3e-41
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 788 LGQPVLPSSSFTCLPEDGVANAASLL 813
+G+ +L S+ F CL D + +AA+ L
Sbjct: 640 MGKMILMSALFCCL--DPITSAAAAL 663
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 268 (99.4 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 72/230 (31%), Positives = 126/230 (54%)
Query: 259 KLIHDLVLHIHKNES--DIEKSILVFLPTYYALEQQWHLMKPLSSF-----FKVHILHSS 311
+LI +L+ ++ ++ + E ++L+FLP ++Q + L+ F ++ LHS
Sbjct: 849 ELILELLAYLDRSPQFKNTEGAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIALHSV 908
Query: 312 VDTEQALMAMKICK-SHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAE 370
+ T+ A + RK++LATNIAE+ +TIP V +VIDS R+ + + + ++ S E
Sbjct: 909 LSTQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLE 968
Query: 371 LVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAE 430
+VS++ A QR+GR GR DG +R+ T+ F + ++ P I +C
Sbjct: 969 ETFVSKASALQRQGRAGRVRDGFCFRMYTRDRFESFMEYSVPEILRVPLEE----LCLHI 1024
Query: 431 SKA-ISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ----KISPRGRY 475
K + P+ L +ALDPP P+V+G+A++LL A Q K++P G++
Sbjct: 1025 MKCNLGSPEDFLSRALDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQH 1074
Score = 261 (96.9 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 73/217 (33%), Positives = 109/217 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
V R IVE + ++RV ++ GETG GKS+QVP FLL + + I+CTQPRR
Sbjct: 576 VFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTRKCNIVCTQPRRIS 635
Query: 81 XXXXXXXXXXGRNCELG--GE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGL-N 134
CE G G+ GY I E +++++ T GVLL ++++ GL +
Sbjct: 636 AVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRKLQEDGLLS 695
Query: 135 ALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF------ 188
++ + +I+DEVHERSV SD +DL ++LMSAT D K+ YF
Sbjct: 696 SISH--VIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVDSEKFSSYFAHCPIL 753
Query: 189 RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQVTE 223
R GR VEV + + T + ++ Y ++ E
Sbjct: 754 RISGRSYPVEVFHVEDVIEATGYVLEKDSEYCQKFLE 790
>UNIPROTKB|F1S9V4 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:CU693433 Ensembl:ENSSSCT00000002836
ArrayExpress:F1S9V4 Uniprot:F1S9V4
Length = 1333
Score = 439 (159.6 bits), Expect = 4.4e-39, Sum P(2) = 4.4e-39
Identities = 145/474 (30%), Positives = 220/474 (46%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRFXXXXXXX 86
+E+++ + N V +I G TG GKS+Q+PQ++L +++ I+ TQPR+
Sbjct: 145 KEEVISLIESNSVVIIHGATGSGKSTQLPQYILDRSVQRSTYCNIVVTQPRKIGASSIAR 204
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEV 146
R LGG VGY +G K +E +K+++ T GVLL ++ + +++ I +DEV
Sbjct: 205 WISKERAWTLGGLVGYQVGLEKIATEDTKLIYMTTGVLLQKIVS-AKSLMEFTHIFIDEV 263
Query: 147 HERSVESDXXXXXXXXXXXXXND-LRVVLMSATADITKYRDYFRDLGRGERVEVLAIPST 205
HER+ E D + ++VVLMSAT ++ DYF + E
Sbjct: 264 HERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNE---------L 314
Query: 206 NQRTIFQ-RRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDL 264
N +++ Y + L ++H LS P+ E+ + +L DL
Sbjct: 315 NPACVYEVEGEPYAVEECYLDDLEHLHRGRLSP-HLLEEPAIPTEIYEVAVSLIQLFDDL 373
Query: 265 VLHIHKNE------SDIEKS-ILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVDTE- 315
+ N+ S E+S +LVFLP + L+ + +V+ LHSSV E
Sbjct: 374 DMKESGNKTWSGAPSAWERSSVLVFLPGLGEINCMHELLTNMVHKRLQVYPLHSSVTLEE 433
Query: 316 QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVS 375
Q + + +RKVIL+TNIAESSVT+P V YVID C + + D + S L W S
Sbjct: 434 QNNVFLSPVPGYRKVILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWAS 493
Query: 376 QSQAEQRR-GRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKA 433
++ QR+ GR GR G YRLV K F+ T + DH P + + +
Sbjct: 494 KTSCNQRKEGRAGRVSKGYCYRLVPKDFWDTSIPDHVIPEMLRCPLGSTILKLKLLD--- 550
Query: 434 ISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGR 482
+ +P+ LL AL PP + + LL AL PR P TF GR
Sbjct: 551 MGEPRALLATALSPPSLGDIERTILLLKEVGALAVRGPRDDENPHDGELTFLGR 604
Score = 68 (29.0 bits), Expect = 4.4e-39, Sum P(2) = 4.4e-39
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 598 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 632
PK E +W L+Y+ + V+ELYE++ + V +F
Sbjct: 691 PKDELDWGRLNYIQIKRIREVAELYEELKSRVSQF 725
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 440 (159.9 bits), Expect = 8.0e-39, Sum P(2) = 8.0e-39
Identities = 147/477 (30%), Positives = 224/477 (46%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-----PILCTQPRRFXXXXXXX 86
+E++V + N V +I G TG GKS+Q+PQ++L ++ I+ TQPR+
Sbjct: 138 KEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYCSIVVTQPRKIGASSIAR 197
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEV 146
R LGG VGY +G K +E +++++ T GVLL ++ + +++ II+DEV
Sbjct: 198 WISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVS-AKSLMEFTHIIIDEV 256
Query: 147 HERSVESDXXXXXXXXXXXXXND-LRVVLMSATADITKYRDYFRDLGRGERVEVLAIPST 205
HER+ E D + ++VVLMSAT ++ DYF A+P
Sbjct: 257 HERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYF------------AVPVQ 304
Query: 206 NQRT---IFQRRVSYLEQVTE--LLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKL 260
N+ IF+ V E L ++H S+LS P + E+ + ++
Sbjct: 305 NKMNPAYIFEVE-GKPHSVEEYYLNDLEHIHHSKLSP-HLLEEPVITKDIYEVAVSLIQM 362
Query: 261 IHDLVLHIHKNES------DIEKS-ILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSV 312
DL + N++ +E+S +LVFLP + L+ L +V+ LHSSV
Sbjct: 363 FDDLDMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLVHKRLQVYPLHSSV 422
Query: 313 DTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAEL 371
E Q + + +RK+IL+TNIAESSVT+P V YVID C + + D + S L
Sbjct: 423 ALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRL 482
Query: 372 VWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAE 430
W S++ QR+GR GR G YRLV K F+ ++ DH P + + +
Sbjct: 483 SWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLD 542
Query: 431 SKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGR 482
+ +P+ LL AL PP + + LL AL R P TF GR
Sbjct: 543 ---MGEPRALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGR 596
Score = 65 (27.9 bits), Expect = 8.0e-39, Sum P(2) = 8.0e-39
Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 561 NLCAFQFWQHV--------FKDKQRLDHLQQVLKFDETKV---TASL-LPKIEEEWCSLH 608
N A F QH+ F + D + V F K T L PK E W L+
Sbjct: 634 NFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQTGELRYPKDELNWGRLN 693
Query: 609 YLVQSSLHHVSELYEDILNAVHRF 632
Y+ + V+ELYE++ + +F
Sbjct: 694 YIQIKRIREVAELYEELKTRISQF 717
>MGI|MGI:1921941 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009566 "fertilization" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IMP] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IMP]
[GO:0071547 "piP-body" evidence=IDA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 MGI:MGI:1921941 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0030154 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0031047 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
EMBL:AC112520 OMA:INDWFTI CTD:122402 OrthoDB:EOG4F4S96
EMBL:AB362563 EMBL:AC132623 EMBL:BC115831 EMBL:BC116656
IPI:IPI00749982 IPI:IPI00849630 IPI:IPI00914159 RefSeq:NP_083332.1
UniGene:Mm.60648 ProteinModelPortal:Q14BI7 SMR:Q14BI7 STRING:Q14BI7
PhosphoSite:Q14BI7 PaxDb:Q14BI7 PRIDE:Q14BI7
Ensembl:ENSMUST00000079009 GeneID:74691 KEGG:mmu:74691
UCSC:uc007pei.1 UCSC:uc007pej.1 UCSC:uc011yva.1
HOGENOM:HOG000047965 HOVERGEN:HBG072266 InParanoid:B1Q3J8
NextBio:341402 Bgee:Q14BI7 Genevestigator:Q14BI7 Uniprot:Q14BI7
Length = 1383
Score = 424 (154.3 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 139/476 (29%), Positives = 219/476 (46%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRFXXXXXXX 86
+E+++ + N V +I G TG GKS+Q+PQ++L + I+ TQPR+
Sbjct: 140 KEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQRSAFCNIVVTQPRKIGASSIAR 199
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEV 146
R+ LGG VGY +G K +E +++++ T GVLL ++ + +++ I +DEV
Sbjct: 200 WISKERSWTLGGLVGYQVGLEKIATEDTRLIYMTTGVLLQKIVS-AKSLMEFTHIFIDEV 258
Query: 147 HERSVESDXXXXXXXXXXXXXND-LRVVLMSATADITKYRDYFRDLGRGERVEVLAIPST 205
HER+ E D + ++VVLMSAT + ++ DYF A+P
Sbjct: 259 HERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCKQFADYF------------AVPVQ 306
Query: 206 NQRT---IFQRRVSYLEQVTELLGVDHGMTSELSSLRY-CSGPSPSMANAEIKPEVHKLI 261
N+ +F+ + E D G S L Y P + E+ + ++
Sbjct: 307 NKMNPAYVFEVE-GKPHAIEEYYLNDLGHIYH-SGLPYRLEEPVITKDVYEVAVSLIQMF 364
Query: 262 HDLVLHIHKNES-------DIEKSILVFLPTYYALEQQWHLM-KPLSSFFKVHILHSSVD 313
DL + N++ S+LVFLP + L+ + +V+ LHSSV
Sbjct: 365 DDLDMKESGNKTWSGAQFVSERSSVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVT 424
Query: 314 TE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV 372
E Q + + +RK+IL+TNIAESSVT+P V YVID C + + D + S L
Sbjct: 425 LEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLS 484
Query: 373 WVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAES 431
W S++ +QR+GR GR G YRL+ + F+ + + DH P + + +
Sbjct: 485 WASKTSCDQRKGRAGRVSKGYCYRLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLD- 543
Query: 432 KAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGR 482
+ +P+ LL AL PP + + LL AL R P TF GR
Sbjct: 544 --MGEPRALLATALSPPSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGR 597
Score = 78 (32.5 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 598 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYDPYE 651
PK E +W L+Y+ + V+ELYE++ N + +F F+G + + PY+
Sbjct: 684 PKDELDWGRLNYIQIKRIREVAELYEELKNRISQFN-MFVGPHHPVLDQEYPYK 736
Score = 39 (18.8 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 785 SHDLGQPVLPSSSFTCLPEDGVANAASLLRLFPT 818
S LG+ V+ F CL E + AA L+ F T
Sbjct: 605 SQQLGKLVVLGHVFGCLDECLIIAAALSLKNFFT 638
>UNIPROTKB|F1MNA1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:DAAA02053320 EMBL:DAAA02053321 EMBL:DAAA02053322
EMBL:DAAA02053323 IPI:IPI00699308 Ensembl:ENSBTAT00000027199
Uniprot:F1MNA1
Length = 1392
Score = 433 (157.5 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 143/476 (30%), Positives = 222/476 (46%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRFXXXXXXX 86
+E+++ + N V +I G TG GKS+Q+PQ++L ++ I+ TQPR+
Sbjct: 144 KEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYLQRSAYCNIVVTQPRKIGASSIAR 203
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEV 146
R LGG VGY +G K +E +K+++ T GVLL ++ + +++ + +DEV
Sbjct: 204 WISRERGWVLGGLVGYQVGLEKIATEDTKLIYMTTGVLLQKIVS-AKSLVEFTHVFIDEV 262
Query: 147 HERSVESDXXXXXXXXXXXXXND-LRVVLMSATADITKYRDYFRDLGRGERVEVLAIPST 205
HER+ E D + ++VVLMSAT + ++ DYF A+P
Sbjct: 263 HERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCREFADYF------------AVPVQ 310
Query: 206 NQRT---IFQ-RRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLI 261
N+ + IF+ + + L ++H S LS P + A E+ + ++
Sbjct: 311 NKMSPAYIFEVEGKPFSIEEYYLNDLEHVHHSRLSP-HLLEEPVITRAVYEVAISLIQMF 369
Query: 262 HDLVLHIH--KNESDI-----EKSILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVD 313
DL + K S S+LVFLP + L+ + +V+ LHSSV
Sbjct: 370 DDLDMKESGAKTPSGSPFLSERSSVLVFLPGLGEINYMHELLTNMVHKRLQVYPLHSSVT 429
Query: 314 TE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV 372
E Q + + +RK+IL+TNIAESSVT+P V YVID C + + D + S L
Sbjct: 430 LEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLS 489
Query: 373 WVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAES 431
W S++ EQR+GR GR G YRLV K F+ ++ +H P + + +
Sbjct: 490 WASKTSCEQRKGRAGRVSKGYCYRLVHKDFWDNSIPNHVIPEMLRCPLGSTILKVKLLD- 548
Query: 432 KAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGR 482
+ +P+ LL AL PP + + LL AL R P TF GR
Sbjct: 549 --MGEPRALLATALSPPSLSDIERTILLLKEVGALAVSGRREDDNPHDGELTFLGR 602
Score = 67 (28.6 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 598 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 632
PK E +W L+Y+ + V+ELYE++ V +F
Sbjct: 692 PKDELDWGRLNYIQIKRIREVAELYEELKTRVSQF 726
>RGD|1306942 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0007140 "male meiosis" evidence=ISO;ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=ISO;ISS] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009566
"fertilization" evidence=ISO;ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0034587 "piRNA metabolic process"
evidence=ISO;ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISO;ISS] [GO:0071547 "piP-body"
evidence=ISO;ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
RGD:1306942 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0030154
GO:GO:0009566 GO:GO:0007283 GO:GO:0003676 GO:GO:0031047
GO:GO:0007140 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034587 eggNOG:COG1643 GeneTree:ENSGT00700000104393
GO:GO:0008026 GO:GO:0071547 CTD:122402 OrthoDB:EOG4F4S96
HOGENOM:HOG000047965 EMBL:AABR03050289 EMBL:AABR03048647
EMBL:AABR03049552 EMBL:AABR03049859 EMBL:AABR03050293
EMBL:AABR03051941 EMBL:BC104675 IPI:IPI00655293 IPI:IPI00895578
RefSeq:XP_001072421.2 UniGene:Rn.126122 STRING:Q3MHU3 PRIDE:Q3MHU3
Ensembl:ENSRNOT00000017118 GeneID:299343 KEGG:rno:299343
UCSC:RGD:1306942 NextBio:645254 Genevestigator:Q3MHU3
Uniprot:Q3MHU3
Length = 1384
Score = 427 (155.4 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 138/477 (28%), Positives = 222/477 (46%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRFXXXXXXX 86
+E+++ + N V +I G TG GKS+Q+PQ++L + I+ TQPR+
Sbjct: 140 KEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQRSAFCNIVVTQPRKIGASSIAR 199
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEV 146
R+ LGG VGY +G K +E +++++ T GVLL ++ + +++ + +DEV
Sbjct: 200 WISKERSWTLGGLVGYQVGLEKTATEDTRLIYMTTGVLLQKIVS-AKSLMEFTHVFIDEV 258
Query: 147 HERSVESDXXXXXXXXXXXXXND-LRVVLMSATADITKYRDYFRDLGRGERVEVLAIPST 205
HER+ E D + ++V+LMSAT + ++ DYF A+P
Sbjct: 259 HERTEEMDFLLLVVRKLLRTNSRFVKVILMSATINCKQFADYF------------AVPVQ 306
Query: 206 NQRT---IFQ--RRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKL 260
N+ +F+ + +EQ L + H S L R P + E+ + ++
Sbjct: 307 NKMNPAYVFEVEGKPHTIEQYY-LNDLGHIYHSGLPPYRL-EEPVITKDVYEVAVSLIQM 364
Query: 261 IHDLVLHIHKNES-------DIEKSILVFLPTYYALEQQWHLM-KPLSSFFKVHILHSSV 312
DL + N++ S+LVFLP + L+ + +V+ LHSSV
Sbjct: 365 FDDLDMKESGNKTWSGAQFVSERSSVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSV 424
Query: 313 DTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAEL 371
E Q + + +RK+IL+TNIAESSVT+P V YVID C + + D + S L
Sbjct: 425 TLEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRL 484
Query: 372 VWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAE 430
W S++ +QR+GR GR G YRL+ + F+ + + DH P + + +
Sbjct: 485 SWASKTSCDQRKGRAGRVSKGYCYRLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLD 544
Query: 431 SKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGR 482
+ +P+ LL AL PP + + LL AL R P TF GR
Sbjct: 545 ---MGEPRALLATALSPPSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGR 598
Score = 72 (30.4 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 598 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 632
PK E +W L+Y+ + V+ELYE++ N + +F
Sbjct: 685 PKDELDWGRLNYIQIKRIREVAELYEELKNRISQF 719
Score = 38 (18.4 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 785 SHDLGQPVLPSSSFTCLPEDGVANAASLLRLFPT 818
S LG+ ++ F CL E + AA L+ F T
Sbjct: 606 SQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFT 639
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 436 (158.5 bits), Expect = 7.3e-38, Sum P(4) = 7.3e-38
Identities = 132/438 (30%), Positives = 206/438 (47%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLL---AENMEP--ILCTQPRRFXXXXXXX 86
R+++V + N V +I G TG GK++Q+PQF+L AE P ++ TQPR+
Sbjct: 95 RQELVSLIENNSVVIIRGATGSGKTTQLPQFILDHYAERNIPCNLVVTQPRKIGATSIAR 154
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEV 146
R C LG VGY +G K +E +K+++ T GVLL ++ +Y I +DEV
Sbjct: 155 WVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVS-SKTLTEYSHIFIDEV 213
Query: 147 HERSVESDXXXXXXXXXXXXXND-LRVVLMSATADITKYRDYFRDLGRGERVEVLAIPST 205
HERS E D + ++V+LMSAT + ++ +YF R +
Sbjct: 214 HERSEELDFLLLVVRKLLRSNSRYVKVILMSATINCIEFAEYFGSPIRNQMNPAYVFEVE 273
Query: 206 NQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKP--EVHKLIHD 263
+ YL+++ +L V + L Y + ++A + I+ E+ H
Sbjct: 274 GAPYAVEEY--YLDELKTMLPVGVNLDLTLPQDPYITEEMYNVAVSLIQSFDEMEAKDHR 331
Query: 264 LVLHIHKNESDIEK--SILVFLPTYYALEQQWH-LMKPLSSFFKVHILHSSVDTEQALMA 320
+ + S+LVFLP ++ L K + +V+ LHS+V E+
Sbjct: 332 SRRSEQTGSTTHPERGSVLVFLPGLAEIQYMKEALSKLVRKRLQVYPLHSTVTLEEQNGV 391
Query: 321 MKI-CKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQA 379
+ +RK+IL+TNIAESSVT+P V YVID C Q+ D + W S++
Sbjct: 392 FLVPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSC 451
Query: 380 EQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECP--AIXXXXXXXXXXXICCAESKAISDP 437
QRRGR GR G YRLVT+ F+ ++E P +I + + + DP
Sbjct: 452 NQRRGRAGRVSKGFCYRLVTRHFW----ENEIPNFSIPEMLRSPLASTLLKVKLLDMGDP 507
Query: 438 KVLLQKALDPPYPEVVGD 455
+ +L AL PP ++GD
Sbjct: 508 RSVLSTALTPP---ILGD 522
Score = 70 (29.7 bits), Expect = 7.3e-38, Sum P(4) = 7.3e-38
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 598 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYY 647
PK E EW + + + V+EL+ED+ V RF +SN PT Y
Sbjct: 642 PKDELEWGKENCIQIKRIREVAELFEDLKKRVSRFNMHISSSSN--PTDY 689
Score = 42 (19.8 bits), Expect = 7.3e-38, Sum P(4) = 7.3e-38
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 783 IFSHDLGQP-VLPSSSFTCLPED 804
+F D G V+PSSS LP D
Sbjct: 938 VFFVDFGNTTVVPSSSLRELPSD 960
Score = 38 (18.4 bits), Expect = 7.3e-38, Sum P(4) = 7.3e-38
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 693 PNQFQSNNVAEKLASIIKEI 712
PN F + E+LAS KE+
Sbjct: 709 PNYFSQGEIDEQLAS--KEL 726
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 441 (160.3 bits), Expect = 1.2e-37, P = 1.2e-37
Identities = 126/392 (32%), Positives = 196/392 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-----AENMEPILCTQPRRFXXX 82
+ +E+I+ V N VT+I G+TG GK++QVPQ++L A I+ TQPRR
Sbjct: 144 ITGYQEEIITTVESNSVTVIQGDTGSGKTTQVPQYILDHYARANRWCNIVVTQPRRIAAI 203
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEM-RDRGLNALKYKVI 141
R LGG VGY +G K SE +++ F T GVLL ++ + +N + +
Sbjct: 204 SIARRVADERGWRLGGIVGYQVGMDKQQSEDTRLSFVTTGVLLQKLINTKNMNQFTH--V 261
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXN-DLRVVLMSATADITKYRDYFRDLGRGERVEVL 200
ILDEVHER E+D + ++VVLMSAT D + + YF RGE
Sbjct: 262 ILDEVHERDQETDFALLVARKLLRSNSRHVKVVLMSATLDSSMFAGYFSIPVRGELAPAP 321
Query: 201 AIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRY-CSGPSPSMANAEIKPEVHK 259
+ T + +F Y+E + L L L + C P S + E+ ++
Sbjct: 322 VV--TVEGRLFPVTEFYVEDLAPL--------GPLPVLEWDC--PEISQQSFELARKLIL 369
Query: 260 LIHDLVLHIH-KNESD---IEK-SILVFLPTYYALEQQWHLMKPLSSFFKVHIL--HSSV 312
L ++ S+ + + ++LVFLP + L+ ++ +K+ +L HS++
Sbjct: 370 YFDQLEAQEQGRSISEGLGVNRGTVLVFLPGLAEINTLDELLAHETTRYKLWVLPLHSTI 429
Query: 313 DTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAEL 371
+E+ + H RKVIL+TNIAESS+T+P + YVID C + + D S +L
Sbjct: 430 TSEEQAQVFVPPRPHQRKVILSTNIAESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQL 489
Query: 372 VWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF 403
W SQ+ QR+GR GR G+ YR+V++ F+
Sbjct: 490 NWASQANCTQRKGRAGRVSSGRAYRMVSREFY 521
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 277 (102.6 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 59/155 (38%), Positives = 90/155 (58%)
Query: 34 KIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFXXXXXXXXXXXGRN 93
+I++ + E++V ++ G+TGCGKS+QVPQ+LLA + CTQPRR
Sbjct: 172 RILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVGFESL 231
Query: 94 CELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVES 153
+ G +VGY I S +KIVF T G+LL +++ R + +Y+V+I+DEVHER + +
Sbjct: 232 SQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQ-REPSLPQYQVLIVDEVHERHLHN 290
Query: 154 DXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
D DL+V+LMSAT +I+ + YF
Sbjct: 291 DFLLGVLQRLLPQRPDLKVILMSATINISLFSSYF 325
Score = 208 (78.3 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 61/199 (30%), Positives = 97/199 (48%)
Query: 278 SILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIA 337
++L Y +L Q+W ++ PL S V D A + RK IL+TNIA
Sbjct: 395 TVLDAAQAYASLTQRWVVL-PLHSALSVSDQDKVFDVAPAGV--------RKCILSTNIA 445
Query: 338 ESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRL 397
E+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR GRT G YRL
Sbjct: 446 ETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRL 505
Query: 398 VTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDAL 457
+S + + P I + +S ++ DP+ ++PP P V A+
Sbjct: 506 YAESDYDAFAPYPVPEIRRVALDALVLQM---KSMSVGDPRTF--PFIEPPPPASVETAI 560
Query: 458 DLLDHKRAL---QKISPRG 473
L + AL + ++P G
Sbjct: 561 LYLQEQGALDSSEALTPIG 579
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 436 (158.5 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 140/472 (29%), Positives = 222/472 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
V + +E+I+ + N V +I G TGCGK++QVPQ++L E ++ I+ TQPRR
Sbjct: 397 VKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDEFIKGGRASDCNIVVTQPRRIS 456
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYK 139
R ++G GY + L + I+F T GVLL ++ + G+ + +
Sbjct: 457 AVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRKL-ESGIRGISH- 514
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
+I+DE+HER + +D D+RV+LMSAT D T +++YF + GR
Sbjct: 515 -VIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFNCPVIEVHGR 573
Query: 194 GERVEVLAIPSTNQRTIF-QRRVSYLEQVTELLGVDHGMTSE-LSSLRYCSGPSPSMANA 251
V+ + Q T F + + + G D + + Y +M+
Sbjct: 574 AHPVQEYFLEDCIQMTQFVPPPMDRKRKDKDDEGGDEDVNCNVICGSEYSPETKRAMSQL 633
Query: 252 EIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALE-QQWHL-MKPLSSFFKVHIL- 308
K +LI L+ +I E + ++LVFLP + + Q HL M P + IL
Sbjct: 634 NEKETSFELIEALLKYIETLE--VPGAVLVFLPGWNLIYFMQKHLEMNPHFGGHQYRILP 691
Query: 309 -HSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRS-LQVFWDVNRK 365
HS + E+ + + KVIL+TNIAE+S+TI V +V+DSC+ +++F N
Sbjct: 692 LHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNM 751
Query: 366 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXX 425
+ A VW S++ EQR+GR GR G + L +++ F LE H P I
Sbjct: 752 TNYAT-VWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMTPEIFRTPLHEVALS 810
Query: 426 ICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ---KISPRGR 474
I I + L KA++PP + V +A L AL +++P GR
Sbjct: 811 IKLLRLGGIGN---FLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGR 859
Score = 44 (20.5 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 782 CIFSHDLGQPVLPSSSFTCLPE 803
CIF+ +G V S+ TC PE
Sbjct: 878 CIFN--VGDAVCTISAATCFPE 897
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 278 (102.9 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 59/155 (38%), Positives = 90/155 (58%)
Query: 34 KIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFXXXXXXXXXXXGRN 93
+I++ + E++V ++ G+TGCGKS+QVPQ+LLA + CTQPRR
Sbjct: 170 RILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVGFESL 229
Query: 94 CELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVES 153
+ G +VGY I S +KIVF T G+LL +++ R + +Y+V+I+DEVHER + +
Sbjct: 230 SQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQ-REPSLPQYEVLIVDEVHERHLHN 288
Query: 154 DXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
D DL+V+LMSAT +I+ + YF
Sbjct: 289 DFLLGVLQRLLPTRPDLKVILMSATINISLFSSYF 323
Score = 192 (72.6 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 48/149 (32%), Positives = 79/149 (53%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RK IL+TNIAE+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR G
Sbjct: 349 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 408
Query: 388 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 447
RT G +RL +S + + P I + +S ++ DP+ ++P
Sbjct: 409 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQM---KSMSVGDPRTF--PFIEP 463
Query: 448 PYPEVVGDALDLLDHKRAL---QKISPRG 473
P P + A+ L + AL + ++P G
Sbjct: 464 PPPASLETAILYLRDQGALDSSEALTPIG 492
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 285 (105.4 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 64/164 (39%), Positives = 91/164 (55%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFXXXXXXXX 87
+ R+KIVE V + V ++ G+TGCGKS+QVPQ+LLA + I CTQPRR
Sbjct: 164 IFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLASGINNIACTQPRRIACISLAKR 223
Query: 88 XXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIILDEV 146
+ G +VGY I + +K++F T G+LL +++ D L +Y+V+I+DEV
Sbjct: 224 VSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLLLRQIQQDASLG--QYQVLIVDEV 281
Query: 147 HERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRD 190
HER + D DLR+VLMSAT +I + YF D
Sbjct: 282 HERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKLFSSYFND 325
Score = 193 (73.0 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 51/162 (31%), Positives = 81/162 (50%)
Query: 308 LHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 366
LHS++ Q I RK I++TNIAE+SVTI V +V+DS + ++ +D K+
Sbjct: 413 LHSTLSLAQQDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKM 472
Query: 367 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXI 426
+ W+S++ +EQR+GR GRT G YRL ++S + + P I I
Sbjct: 473 QRLQEFWISRASSEQRKGRAGRTGPGVCYRLYSESDYDAFAPYPVPEIHRVALDSL---I 529
Query: 427 CCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK 468
+S + DP+ +DPP + A+ L + AL +
Sbjct: 530 LQMKSMGLGDPRTFT--FIDPPPASSIQTAVTYLREQGALDE 569
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 263 (97.6 bits), Expect = 1.8e-35, Sum P(2) = 1.8e-35
Identities = 58/169 (34%), Positives = 94/169 (55%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-------AENMEPILCTQPRRFXXXXX 84
R KI++ + ++V +I GETG GKS+QV QF+L ++++ ++CTQPRR
Sbjct: 583 RRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKDLQTVVCTQPRRISAISL 642
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALK-YKVIIL 143
R+ +G EVGY + K +S+ + + F T G+LL ++ GL L +++
Sbjct: 643 AERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRRIQQHGLGFLSTLSCVVV 702
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLG 192
DEVHERS+E+D +L+V+LMSAT + ++ YF + G
Sbjct: 703 DEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGNAG 751
Score = 216 (81.1 bits), Expect = 1.8e-35, Sum P(2) = 1.8e-35
Identities = 60/158 (37%), Positives = 84/158 (53%)
Query: 246 PSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLS-SFFK 304
P E + + H LI LV I SILVFLP + + +K S F+
Sbjct: 784 PRRKKKEYEIDYH-LISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIKSKDGSKFE 842
Query: 305 VHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNR 364
V LH+S++T + K + RK+I ATNIAE+S+TI V VIDS R Q+ +DV R
Sbjct: 843 VLPLHASLNTSEQRRCFKTY-TKRKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVER 901
Query: 365 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSF 402
+ + + W S++ +QRRGR GR G Y+L T+ F
Sbjct: 902 DLVTFKETWASRAACQQRRGRAGRVKKGICYKLYTRGF 939
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 269 (99.8 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
Identities = 80/227 (35%), Positives = 107/227 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
V RE IV+ V ENRVTLI GETGCGKS+QV QFLL +E + +QPRR
Sbjct: 383 VAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFNAVVSQPRRIS 442
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSER-SKIVFKTAGVLLDEMRDRGLNALKYK 139
R E+G GY++ I+F T GVLL M + GL + +
Sbjct: 443 AISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLL-RMMENGLRGISH- 500
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEV 199
+I+DE+HER V++D DLRVVLMSAT D + ++F + V
Sbjct: 501 -VIIDEIHERDVDTDFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIPDVGPTPV 559
Query: 200 LAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSP 246
+ + + RT F + YLE + L + H R GP P
Sbjct: 560 ITM---HGRT-FPVQSFYLEDI--LHNLQHMPEEPDQKKRKKGGPPP 600
Score = 209 (78.6 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 275 IEKSILVFLPTYYALEQQWHLMKPLSSF-----FKVHILHSSVDTEQALMAMKICKSHRK 329
++ ++LVFLP + + + + F +++ LHS + +++ RK
Sbjct: 658 VDGAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYPGKRK 717
Query: 330 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 389
+I++TNIAE+S+TI V YVIDSC++ + + N + VW S++ QRRGR GR
Sbjct: 718 IIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRV 777
Query: 390 CDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPY 449
G + L +K F L+DH + I ++ + L KAL PP
Sbjct: 778 RAGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIKLLRLGSVGE---FLGKALQPPP 834
Query: 450 PEVVGDALDLLDHKRALQK 468
++V ++ +L AL +
Sbjct: 835 YDMVVESEAVLQAMGALDR 853
Score = 42 (19.8 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 875 SLKTVISEAGDNPIPWKEVKCVL 897
SLKT +S + IP+ ++ +L
Sbjct: 628 SLKTAMSRISEKDIPFGVIEAIL 650
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 418 (152.2 bits), Expect = 3.4e-35, P = 3.4e-35
Identities = 137/459 (29%), Positives = 206/459 (44%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLL------AENMEPILCTQPRRFXXXXXX 85
+E ++ + +VTLI GETG GKS+QV QF++ + I+CTQPRR
Sbjct: 579 QESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKGDFTTKIICTQPRRLSAVSLA 638
Query: 86 XXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKV--IIL 143
R E+G E GY I S ++I F T GVLL ++ N + + I++
Sbjct: 639 DRISKERVDEVGSETGYIIRGENKTSSNTRITFATTGVLLRMLQSSKKNGVLKNIGYILI 698
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIP 203
DEVHERSV++D L+++L+SAT + + ++F +E P
Sbjct: 699 DEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDTFINFFEKPLTPLHIEGRTYP 758
Query: 204 STNQRTIFQRRVSYLEQVTELLGVD-HGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIH 262
+ F E + D +T S Y SG N E+ V + I
Sbjct: 759 IQD----FYLDSILAESEYKFQNSDGEFITPSADSHFYKSGN----LNYELIAHVTRFI- 809
Query: 263 DLVLHIHKNESDIEKSILVFLPTYYALEQQW-HLMKPLSSFFKVHILHSSVDTEQALMAM 321
D L E+ + SIL+FLP + + K + F LHS + + +
Sbjct: 810 DKRL---TQEAKQDGSILIFLPGVLEISSTIKEINKSSDNKFMALPLHSGLTSAEQKSIF 866
Query: 322 KIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV--WVSQSQ 378
K K RKV+++TNIAE+S+TIP VID+ +S +F+D K+++ +L+ W SQ++
Sbjct: 867 KTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFD--HKLNTTKLIESWCSQAE 924
Query: 379 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPK 438
QRRGR GR G Y L TK F ++ P I + +S IS+
Sbjct: 925 VRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVV---KSMGISNVN 981
Query: 439 VLLQKALDPPYPEVVGDALDLLDHKRALQK--ISPRGRY 475
L LD P + A L ALQ+ ++ G Y
Sbjct: 982 EFLSSGLDAPDKSSLDKANQFLHEIGALQENSLTKLGNY 1020
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 418 (152.2 bits), Expect = 3.4e-35, P = 3.4e-35
Identities = 137/459 (29%), Positives = 206/459 (44%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLL------AENMEPILCTQPRRFXXXXXX 85
+E ++ + +VTLI GETG GKS+QV QF++ + I+CTQPRR
Sbjct: 579 QESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKGDFTTKIICTQPRRLSAVSLA 638
Query: 86 XXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKV--IIL 143
R E+G E GY I S ++I F T GVLL ++ N + + I++
Sbjct: 639 DRISKERVDEVGSETGYIIRGENKTSSNTRITFATTGVLLRMLQSSKKNGVLKNIGYILI 698
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIP 203
DEVHERSV++D L+++L+SAT + + ++F +E P
Sbjct: 699 DEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDTFINFFEKPLTPLHIEGRTYP 758
Query: 204 STNQRTIFQRRVSYLEQVTELLGVD-HGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIH 262
+ F E + D +T S Y SG N E+ V + I
Sbjct: 759 IQD----FYLDSILAESEYKFQNSDGEFITPSADSHFYKSGN----LNYELIAHVTRFI- 809
Query: 263 DLVLHIHKNESDIEKSILVFLPTYYALEQQW-HLMKPLSSFFKVHILHSSVDTEQALMAM 321
D L E+ + SIL+FLP + + K + F LHS + + +
Sbjct: 810 DKRL---TQEAKQDGSILIFLPGVLEISSTIKEINKSSDNKFMALPLHSGLTSAEQKSIF 866
Query: 322 KIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV--WVSQSQ 378
K K RKV+++TNIAE+S+TIP VID+ +S +F+D K+++ +L+ W SQ++
Sbjct: 867 KTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFD--HKLNTTKLIESWCSQAE 924
Query: 379 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPK 438
QRRGR GR G Y L TK F ++ P I + +S IS+
Sbjct: 925 VRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVV---KSMGISNVN 981
Query: 439 VLLQKALDPPYPEVVGDALDLLDHKRALQK--ISPRGRY 475
L LD P + A L ALQ+ ++ G Y
Sbjct: 982 EFLSSGLDAPDKSSLDKANQFLHEIGALQENSLTKLGNY 1020
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 275 (101.9 bits), Expect = 4.7e-35, Sum P(2) = 4.7e-35
Identities = 58/155 (37%), Positives = 90/155 (58%)
Query: 34 KIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFXXXXXXXXXXXGRN 93
+I++ + E++V ++ G+TGCGKS+QVPQ+LLA + CTQPRR
Sbjct: 169 RILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVSFESL 228
Query: 94 CELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVES 153
+ G +VGY I + +KIVF T G+LL +++ R + +Y+V+I+DEVHER + +
Sbjct: 229 SQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQ-REPSLPQYQVLIVDEVHERHLHN 287
Query: 154 DXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
D DL+V+LMSAT +I+ + YF
Sbjct: 288 DFLLGVLRRLLPKRPDLKVILMSATINISLFSSYF 322
Score = 198 (74.8 bits), Expect = 4.7e-35, Sum P(2) = 4.7e-35
Identities = 59/199 (29%), Positives = 97/199 (48%)
Query: 278 SILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIA 337
S+L TY + Q+W ++ PL S V D ++ RK IL+TNIA
Sbjct: 392 SVLEAAQTYASRTQRWVVL-PLHSALSV------ADQDKVFDVAP--PGVRKCILSTNIA 442
Query: 338 ESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRL 397
E+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR GRT G +RL
Sbjct: 443 ETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRL 502
Query: 398 VTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDAL 457
+S + + P I + +S ++ DP+ ++PP P + A+
Sbjct: 503 YAESDYDAFAPYPVPEIRRVALDALVLQM---KSMSVGDPRTF--PFIEPPPPASLETAI 557
Query: 458 DLLDHKRAL---QKISPRG 473
L + AL + ++P G
Sbjct: 558 LYLQDQGALDSSEALTPIG 576
Score = 38 (18.4 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 663 PRDMDPLAADNEHLGP 678
P++ +P+A+ +E L P
Sbjct: 343 PQEAEPVASKSEKLDP 358
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 275 (101.9 bits), Expect = 5.1e-35, Sum P(2) = 5.1e-35
Identities = 58/155 (37%), Positives = 90/155 (58%)
Query: 34 KIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFXXXXXXXXXXXGRN 93
+I++ + E++V ++ G+TGCGKS+QVPQ+LLA + CTQPRR
Sbjct: 174 RILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVSFESL 233
Query: 94 CELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVES 153
+ G +VGY I + +KIVF T G+LL +++ R + +Y+V+I+DEVHER + +
Sbjct: 234 SQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQ-REPSLPQYQVLIVDEVHERHLHN 292
Query: 154 DXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
D DL+V+LMSAT +I+ + YF
Sbjct: 293 DFLLGVLRRLLPKRPDLKVILMSATINISLFSSYF 327
Score = 198 (74.8 bits), Expect = 5.1e-35, Sum P(2) = 5.1e-35
Identities = 59/199 (29%), Positives = 97/199 (48%)
Query: 278 SILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIA 337
S+L TY + Q+W ++ PL S V D ++ RK IL+TNIA
Sbjct: 397 SVLEAAQTYASRTQRWVVL-PLHSALSV------ADQDKVFDVAP--PGVRKCILSTNIA 447
Query: 338 ESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRL 397
E+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR GRT G +RL
Sbjct: 448 ETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRL 507
Query: 398 VTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDAL 457
+S + + P I + +S ++ DP+ ++PP P + A+
Sbjct: 508 YAESDYDAFAPYPVPEIRRVALDALVLQM---KSMSVGDPRTF--PFIEPPPPASLETAI 562
Query: 458 DLLDHKRAL---QKISPRG 473
L + AL + ++P G
Sbjct: 563 LYLQDQGALDSSEALTPIG 581
Score = 38 (18.4 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 663 PRDMDPLAADNEHLGP 678
P++ +P+A+ +E L P
Sbjct: 348 PQEAEPVASKSEKLDP 363
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 239 (89.2 bits), Expect = 5.4e-35, Sum P(2) = 5.4e-35
Identities = 72/216 (33%), Positives = 103/216 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL----AENMEP--ILCTQPRRFXX 81
+ S ++ I V N+V LI GETGCGK++QVPQ+LL + E I+CTQPRR
Sbjct: 189 ITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISA 248
Query: 82 XXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKV- 140
R +G +GY + S +VF T G+LL + +G + +
Sbjct: 249 MSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSVSDIT 308
Query: 141 -IILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEV 199
II+DE+HER SD LR++LMSAT D ++ YF G G V
Sbjct: 309 HIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYF---G-G--CPV 362
Query: 200 LAIPSTNQRTIFQRRVSYLEQVTELL--GVDHGMTS 233
+ +P + R YLE V +L G D+ ++S
Sbjct: 363 VRVPGFT----YPVRTLYLEDVLSILKSGGDNHLSS 394
Score = 236 (88.1 bits), Expect = 5.4e-35, Sum P(2) = 5.4e-35
Identities = 81/228 (35%), Positives = 113/228 (49%)
Query: 251 AEIKPE-VH-KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQ--QWHLMKPL---SSFF 303
A I PE V LI L+ I + D +ILVFLP + + + Q L P S+ F
Sbjct: 526 ATINPEQVDVSLIQQLMRKICGDSED--GAILVFLPGWDDINKTRQRLLENPFFADSAKF 583
Query: 304 KVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 362
+ LHS V EQ + + RK++LATNIAES+VTI V YVIDS R + +D
Sbjct: 584 DIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDP 643
Query: 363 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXX 422
+ + + WVS++ A+QR+GR GR G Y L ++ ++ D + P I
Sbjct: 644 YNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEEL 703
Query: 423 XXXICCAESKAISDPKV----LLQKALDPPYPEVVGDALDLLDHKRAL 466
C + K I DP LQK LDPP + + +AL +L AL
Sbjct: 704 -----CLQVK-ILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGAL 745
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 278 (102.9 bits), Expect = 5.8e-35, Sum P(2) = 5.8e-35
Identities = 59/155 (38%), Positives = 90/155 (58%)
Query: 34 KIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFXXXXXXXXXXXGRN 93
+I++ + E++V ++ G+TGCGKS+QVPQ+LLA + CTQPRR
Sbjct: 170 RILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVGFESL 229
Query: 94 CELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVES 153
+ G +VGY I S +KIVF T G+LL +++ R + +Y+V+I+DEVHER + +
Sbjct: 230 SQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQ-REPSLPQYEVLIVDEVHERHLHN 288
Query: 154 DXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
D DL+V+LMSAT +I+ + YF
Sbjct: 289 DFLLGVLQRLLPTRPDLKVILMSATINISLFSSYF 323
Score = 194 (73.4 bits), Expect = 5.8e-35, Sum P(2) = 5.8e-35
Identities = 58/199 (29%), Positives = 97/199 (48%)
Query: 278 SILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIA 337
++L TY + Q+W ++ PL S V D ++ RK IL+TNIA
Sbjct: 393 AVLEAAQTYASHTQRWVVL-PLHSALSV------ADQDKVFDVAP--PGVRKCILSTNIA 443
Query: 338 ESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRL 397
E+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR GRT G +RL
Sbjct: 444 ETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRL 503
Query: 398 VTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDAL 457
+S + + P I + +S ++ DP+ ++PP P + A+
Sbjct: 504 YAESDYDAFAPYPVPEIRRVALDSLVLQM---KSMSVGDPRTF--PFIEPPPPASLETAI 558
Query: 458 DLLDHKRAL---QKISPRG 473
L + AL + ++P G
Sbjct: 559 LYLRDQGALDSSEALTPIG 577
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 279 (103.3 bits), Expect = 7.4e-35, Sum P(2) = 7.4e-35
Identities = 61/154 (39%), Positives = 89/154 (57%)
Query: 35 IVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFXXXXXXXXXXXGRNC 94
I++ + E++V ++ G+TGCGKS+QVPQ+LLA + CTQPRR
Sbjct: 171 ILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAAGCSHVACTQPRRIACISLAKRVGFESLS 230
Query: 95 ELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESD 154
+ G +VGY I S +KIVF T G+LL +M+ R + +Y+V+I+DEVHER + +D
Sbjct: 231 QYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQ-REPSLPQYQVLIVDEVHERHLHND 289
Query: 155 XXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DL+VVLMSAT +I+ + YF
Sbjct: 290 FLLGVLQRLLPQRPDLKVVLMSATINISLFSSYF 323
Score = 192 (72.6 bits), Expect = 7.4e-35, Sum P(2) = 7.4e-35
Identities = 48/149 (32%), Positives = 79/149 (53%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RK IL+TNIAE+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR G
Sbjct: 434 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 493
Query: 388 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 447
RT G +RL +S + + P I + +S ++ DP+ ++P
Sbjct: 494 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQM---KSMSVGDPRTF--PFIEP 548
Query: 448 PYPEVVGDALDLLDHKRAL---QKISPRG 473
P P + A+ L + AL + ++P G
Sbjct: 549 PPPTSLETAILYLRDQGALDSSEALTPIG 577
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 248 (92.4 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 59/171 (34%), Positives = 94/171 (54%)
Query: 29 MSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXX 81
M ++++V + NRVT+I GETGCGK++QV QF+L + +E I+CTQPRR
Sbjct: 191 MRQKQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRISA 250
Query: 82 XXXXXXXXXGRN--CELGGEVGYHIGHSKHLSERS-KIVFKTAGVLLDEMR-DRGLNALK 137
R C G GY I L + I++ T G++L ++ D+ L+++
Sbjct: 251 ISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSIS 310
Query: 138 YKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+ ++LDE+HER+++SD DL+V+LMSAT + K+ +YF
Sbjct: 311 H--VVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYF 359
Score = 220 (82.5 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 73/243 (30%), Positives = 112/243 (46%)
Query: 239 RYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKP 298
RY +G ++ + LI L+ HI E D +ILVFLP + + L+
Sbjct: 434 RYSAGTIDALEMMDDDKVDLDLIAALIRHIVLEEED--GAILVFLPGWDNISTLHDLLMS 491
Query: 299 LSSF----FKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSC 353
F F + LHS + T Q + K RK+++ATNIAE+S+TI V +VID
Sbjct: 492 QVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGG 551
Query: 354 RSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPA 413
+ + +D I + WVS++ A+QR+GR GR G Y L L+D++ P
Sbjct: 552 KIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPE 611
Query: 414 IXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL---QKIS 470
I I + I+ L K +DPP + V A++ L AL ++++
Sbjct: 612 ILRTPLEELCLQIKILKLGGIA---YFLSKLMDPPSRDAVMLAINHLMELNALDRQEELT 668
Query: 471 PRG 473
P G
Sbjct: 669 PLG 671
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 241 (89.9 bits), Expect = 3.2e-34, Sum P(2) = 3.2e-34
Identities = 57/169 (33%), Positives = 94/169 (55%)
Query: 31 LREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXX 83
+++++V + ++VT+I GETGCGK++QV QF+L + +E I+CTQPRR
Sbjct: 326 MQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAIS 385
Query: 84 XXXXXXXGR--NCELGGEVGYHIGHSKHLSERS-KIVFKTAGVLLDEMR-DRGLNALKYK 139
R +C G GY I L + I++ T G++L ++ D L+++ +
Sbjct: 386 VAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSH- 444
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
I+LDE+HER+++SD DL+V+LMSAT + K+ +YF
Sbjct: 445 -IVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYF 492
Score = 225 (84.3 bits), Expect = 3.2e-34, Sum P(2) = 3.2e-34
Identities = 71/222 (31%), Positives = 102/222 (45%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 314
LI L+ HI E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 588 LIAALIRHIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTV 645
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
Q + K RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 646 NQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 705
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 434
S++ A+QR+GR GR G Y L L+D++ P I I I
Sbjct: 706 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 765
Query: 435 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 473
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 766 A---YFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLG 804
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 278 (102.9 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 60/160 (37%), Positives = 92/160 (57%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFXXXXXXXXXXXG 91
++KI+E + N+VT+++GETG GKS+Q+PQFL+ EN + I TQPRR
Sbjct: 188 KDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMPENPKMIGVTQPRRVAAASLAARVSEE 247
Query: 92 RNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIILDEVHERS 150
C+LG +VGY + + + ++K+ + T G+LL E M D L KY IILDE HER+
Sbjct: 248 YGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSNLT--KYSTIILDEAHERT 305
Query: 151 VESDXXXXXXXXXXXXXN--DLRVVLMSATADITKYRDYF 188
+ +D DL++V+MSAT + + ++F
Sbjct: 306 ILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFF 345
Score = 182 (69.1 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 57/166 (34%), Positives = 91/166 (54%)
Query: 250 NAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALE------QQWHLMKPLSSFF 303
+AE + V +I ++ I+ NE E +L FLP ++ +Q P +
Sbjct: 366 DAESEDIVDTMIRSII-QINLNEP--EGDVLCFLPGQEEIDNCVKSLEQLAPQLPREAPL 422
Query: 304 KVHI-LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS-CRSLQVFW 360
V + L++++ +Q+ + K+ K RKVILATNIAE+S+T+ V YVIDS R ++V W
Sbjct: 423 IVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRKIKV-W 481
Query: 361 DVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTL 406
N + + +SQ+ A QR GR GR +G+V+RL +S + L
Sbjct: 482 KHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYMAL 527
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 253 (94.1 bits), Expect = 4.5e-34, Sum P(2) = 4.5e-34
Identities = 86/307 (28%), Positives = 142/307 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE--NMEP-----ILCTQPRRFX 80
V +++ ++ + EN+V +I ETGCGKS+Q+PQ++L + E I+CTQPRR
Sbjct: 627 VFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILESFISQEKGSECNIVCTQPRRIS 686
Query: 81 XXXXXXXXXXGRNC-----ELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNA 135
NC +GG VGY I + S+ ++++F T G+LL + D N
Sbjct: 687 AIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGILLRRILDVS-NI 745
Query: 136 LKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGE 195
II+DEVHERS ++D DL+++LMSAT + + +YF+
Sbjct: 746 SDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIANYFKCTDDS- 804
Query: 196 RVEVLAIPSTNQRTIFQRRVSYLEQVTELLG-VDHGMTSELSSLRYCSGPSPSMANAEIK 254
+ +IP F + Y+ +V L+ + +++ + + + E +
Sbjct: 805 ---IFSIPGFT----FPVKNIYINEVLPLINKYNPNYKDSITTTTTTTTTTTTNDTNEDE 857
Query: 255 PEV--HKL----------------IHDLVLHIHKNESDIEKSILVFLPTYY-ALEQQWHL 295
E+ +KL + L+LH+ +KSILVF+P LE L
Sbjct: 858 EEILNNKLNQLKISIDQKRINLDVVESLILHLVNGVLKKDKSILVFVPGLSDILELCSRL 917
Query: 296 MKPLSSF 302
KP+S+F
Sbjct: 918 GKPISTF 924
Score = 214 (80.4 bits), Expect = 4.5e-34, Sum P(2) = 4.5e-34
Identities = 72/234 (30%), Positives = 115/234 (49%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYY-ALEQQWHLMKPLSSFFKV---HI----LHSS 311
++ L+LH+ +KSILVF+P LE L KP+S+F + I LHSS
Sbjct: 881 VVESLILHLVNGVLKKDKSILVFVPGLSDILELCSRLGKPISTFTEAICQRIWCVPLHSS 940
Query: 312 VDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD--VNRKIDS 368
+ +Q + K KV++ATNIAE+S+TI V V+D R Q+ ++ + S
Sbjct: 941 LSPKDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSVMS 1000
Query: 369 AELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXI-C 427
E W S++ QR GR GRT G +++ TKS L+D + P I +
Sbjct: 1001 EE--WTSKASCRQRAGRAGRTSSGLCFKVFTKSMESQLQDQDTPEILRTSLQQLCLHVKL 1058
Query: 428 CAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYG 481
++ + + L +A++PP E + +++ L AL KI+ + + E T G
Sbjct: 1059 FLKNNKNTTIQDFLNRAIEPPSSEQIQSSINELISIDAL-KINQQQQQELTPLG 1111
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 253 (94.1 bits), Expect = 7.1e-34, Sum P(3) = 7.1e-34
Identities = 61/169 (36%), Positives = 85/169 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP------ILCTQPRRFXX 81
+ S R+ I+ V N+V LI GETGCGK++QVPQ+LL I+CTQPRR
Sbjct: 219 IASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRISA 278
Query: 82 XXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKV- 140
R +G VGY + S +VF T G+LL + +G+N+ +
Sbjct: 279 ISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVNSSVPDIT 338
Query: 141 -IILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
II+DE+HER SD LR++LMSAT D ++ +YF
Sbjct: 339 HIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYF 387
Score = 220 (82.5 bits), Expect = 7.1e-34, Sum P(3) = 7.1e-34
Identities = 77/228 (33%), Positives = 113/228 (49%)
Query: 251 AEIKPEVHK--LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPL----SSFF 303
A IKPE LI L+ I + D +ILVFLP + + + + L+ S+ F
Sbjct: 550 ATIKPEEVDVGLIVKLMKKICSDSKD--GAILVFLPGWEEISKTKEKLLDDRFFAHSAKF 607
Query: 304 KVHILHSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 362
+ LHS V E Q + + + RK++LATNIAES+VTI V YVIDS R + +D
Sbjct: 608 IILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDP 667
Query: 363 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXX 422
+ + + WVS++ A+QR GR GR G Y L +K +L ++ P +
Sbjct: 668 YNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDEL 727
Query: 423 XXXICCAESKAISDPKV----LLQKALDPPYPEVVGDALDLLDHKRAL 466
C + K + DP LQK +DPP + + +AL +L AL
Sbjct: 728 -----CLQVKML-DPNCNVNDFLQKLMDPPVAQSIENALIILKDIGAL 769
Score = 44 (20.5 bits), Expect = 7.1e-34, Sum P(3) = 7.1e-34
Identities = 31/136 (22%), Positives = 52/136 (38%)
Query: 579 DHLQQVLKFDETK-VTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFL 637
DHL V F K AS K E+CS +++ Q + + +L + ++R
Sbjct: 848 DHLATVAAFQCWKNAKASGQAK---EFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPS 904
Query: 638 GTSNGLPTYYDPYEFEHTCLLNCDPPRD-MDPLAADNEHLGPSFEAKKCVAVPFVAPNQF 696
+SN +DP + P M PL+ + A V VP ++ N
Sbjct: 905 SSSNCSLNAHDPGILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGAKVRVPSLSNNVD 964
Query: 697 QSNNVAEKLASIIKEI 712
S+ ++ + EI
Sbjct: 965 MSSTKFDEALIVFDEI 980
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 277 (102.6 bits), Expect = 8.4e-34, Sum P(2) = 8.4e-34
Identities = 59/161 (36%), Positives = 90/161 (55%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFXXXXXXXX 87
+ R++I++ + E++V ++ G+TGCGKS+QVPQ+LLA + CTQPRR
Sbjct: 164 ISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKR 223
Query: 88 XXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVH 147
+ G +VGY I S +KIVF T G+LL ++ R +Y+V+I+DEVH
Sbjct: 224 VGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQ-REPTLPQYRVLIVDEVH 282
Query: 148 ERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
ER + +D DL+V+LMSAT + + + YF
Sbjct: 283 ERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYF 323
Score = 184 (69.8 bits), Expect = 8.4e-34, Sum P(2) = 8.4e-34
Identities = 47/149 (31%), Positives = 78/149 (52%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RK IL+TNIAE+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR G
Sbjct: 434 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 493
Query: 388 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 447
RT G +RL +S + + P I + +S ++ DP+ ++P
Sbjct: 494 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQM---KSMSVGDPRTF--PFIEP 548
Query: 448 PYPEVVGDALDLLDHKRAL---QKISPRG 473
P + A+ L + AL + ++P G
Sbjct: 549 PPAASLETAILYLRDQGALDGSEALTPIG 577
Score = 40 (19.1 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 12/55 (21%), Positives = 30/55 (54%)
Query: 92 RNCELGGEVGYHI--GHSKHLSERSKIVFKTAGVLLDEMRDRGLNALK-YKVIIL 143
R E G + +++ G + + +++ + A + + + RDR L LK ++V+++
Sbjct: 129 RVSEFRGALLHYLDFGQKQAFARLARLQRERAALPISQYRDRILQTLKEHQVVVV 183
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 262 (97.3 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 64/192 (33%), Positives = 100/192 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM-----EPILCTQPRRFXXX 82
V + R++ ++ ++++ + VGETG GK++Q+PQF+L +++ + I CTQPRR
Sbjct: 101 VHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKMIACTQPRRVAAM 160
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVI 141
+ LG EVGY I S ++ + + T G+LL E M D L+ +Y I
Sbjct: 161 SVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMNDHELS--RYSTI 218
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGE 195
ILDE HER++ +D DL++++MSAT D K++ YF D GR
Sbjct: 219 ILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTH 278
Query: 196 RVEVLAIPSTNQ 207
VE+ P Q
Sbjct: 279 PVEIFYTPEPEQ 290
Score = 183 (69.5 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 52/156 (33%), Positives = 81/156 (51%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKVI++TNIAE+S+TI + YV+D S Q ++ +++S + +S++ A+QR GR G
Sbjct: 378 RKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAG 437
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T+S F L D P I E K + ++ +D
Sbjct: 438 RTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVL-----ELKKLGIDDLVHFDLMD 492
Query: 447 PPYPEVVGDALDLLDHKRALQ---KISPRGRYEPTF 479
PP PE + AL+ L++ L ++P GR F
Sbjct: 493 PPAPETLMRALEELNYLACLDDDGNLTPLGRLASEF 528
Score = 54 (24.1 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 602 EEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYD 648
++WC H+L SL + +L + R + + TS YY+
Sbjct: 607 KQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTSFEDKKYYE 653
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 416 (151.5 bits), Expect = 5.5e-33, Sum P(3) = 5.5e-33
Identities = 136/471 (28%), Positives = 217/471 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
V +I+E + +N V ++ G TGCGK++QVPQF+L + ++ I+ TQPRR
Sbjct: 386 VKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRIS 445
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYK 139
R E G GY + L + I+F T GVLL ++ + G+ + +
Sbjct: 446 AVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-EAGIRGISH- 503
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
+I+DE+HER + +D ++R+VLMSAT D + + +YF + GR
Sbjct: 504 -VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGR 562
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEI 253
V+ + Q T F + + + D G + ++ G + A++
Sbjct: 563 TYPVQEYFLEDCIQMTHF---IPPPKDKKKKDKDDDGSEDDDANCNLICGDEYGLXMAQL 619
Query: 254 --KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPLSSFFKVHIL- 308
K +LI L+ +I ++ ++LVFLP + + Q HL M P + IL
Sbjct: 620 NEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGNHRYQILP 677
Query: 309 -HSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 366
HS + E+ + KVIL+TNIAE+S+TI V YVIDSC+ + + +
Sbjct: 678 LHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNM 737
Query: 367 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXI 426
+ VW S++ EQR+GR GR G + L +++ F LE H P + I
Sbjct: 738 TNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSI 797
Query: 427 CCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGR 474
I L KA++PP + V +A L LD A +++P GR
Sbjct: 798 KLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGR 845
Score = 339 (124.4 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 122/432 (28%), Positives = 191/432 (44%)
Query: 71 ILCTQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMR 129
I+ TQPRR R E G GY + L + I+F T GVLL ++
Sbjct: 436 IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 494
Query: 130 DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFR 189
+ G+ + + +I+DE+HER + +D ++R+VLMSAT D + + +YF
Sbjct: 495 EAGIRGISH--VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFF 552
Query: 190 DL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSG 243
+ GR V+ + Q T F + + + D G + ++ G
Sbjct: 553 NCPIIEVYGRTYPVQEYFLEDCIQMTHF---IPPPKDKKKKDKDDDGSEDDDANCNLICG 609
Query: 244 PSPSMANAEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL 299
+ A++ K +LI L+ +I ++ ++LVFLP + + Q HL M P
Sbjct: 610 DEYGLXMAQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPH 667
Query: 300 SSFFKVHIL--HSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSL 356
+ IL HS + E+ + KVIL+TNIAE+S+TI V YVIDSC+
Sbjct: 668 FGNHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQK 727
Query: 357 QVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXX 416
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 728 VKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFR 787
Query: 417 XXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRG 473
I I L KA++PP + V +A L LD A +++P G
Sbjct: 788 TPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLG 844
Query: 474 RY------EPTF 479
R EP F
Sbjct: 845 RILAKLPIEPRF 856
Score = 42 (19.8 bits), Expect = 5.5e-33, Sum P(3) = 5.5e-33
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 782 CIFSHDLGQPVLPSSSFTCLPEDGVANAASL 812
CIF +G + S+ TC PE ++ L
Sbjct: 864 CIFY--VGDAICTISAATCFPEPFISEGKRL 892
Score = 38 (18.4 bits), Expect = 5.5e-33, Sum P(3) = 5.5e-33
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 820 SDGSILLLDD 829
SDG I+L+DD
Sbjct: 1069 SDGQIVLVDD 1078
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 240 (89.5 bits), Expect = 6.9e-33, Sum P(2) = 6.9e-33
Identities = 58/169 (34%), Positives = 93/169 (55%)
Query: 31 LREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXX 83
+++++V + ++VT+I GETGCGK++QV QF+L +E I+CTQPRR
Sbjct: 214 MQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAIS 273
Query: 84 XXXXXXXGR--NCELGGEVGYHIGHSKHLSERS-KIVFKTAGVLLDEMR-DRGLNALKYK 139
R +C G GY I L + I++ T G++L ++ D L+++ +
Sbjct: 274 VAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSH- 332
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
I+LDE+HER+++SD DL+VVLMSAT + K+ +YF
Sbjct: 333 -IVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYF 380
Score = 212 (79.7 bits), Expect = 6.9e-33, Sum P(2) = 6.9e-33
Identities = 69/222 (31%), Positives = 102/222 (45%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 314
LI L+ +I E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 476 LIAALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTV 533
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
Q + + RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 534 NQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 593
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 434
S++ A+QR+GR GR G Y L L+D++ P I I I
Sbjct: 594 SKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 653
Query: 435 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 473
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 654 AH---FLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLG 692
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 259 (96.2 bits), Expect = 1.7e-32, Sum P(3) = 1.7e-32
Identities = 59/169 (34%), Positives = 91/169 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-----PILCTQPRRFXXX 82
V + R++ ++ N++ + VGETG GK++Q+PQF+L + M + CTQPRR
Sbjct: 95 VHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAM 154
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVI 141
+ +LG EVGY I S ++ + + T G+LL E M D L+ +Y I
Sbjct: 155 SVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLS--RYSCI 212
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRD 190
ILDE HER++ +D DL++++MSAT D K++ YF D
Sbjct: 213 ILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFND 261
Score = 174 (66.3 bits), Expect = 1.7e-32, Sum P(3) = 1.7e-32
Identities = 49/156 (31%), Positives = 80/156 (51%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+++TNIAE+S+TI + YV+D S Q ++ +++S + +S++ A+QR GR G
Sbjct: 370 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAG 429
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T+ F L + P I E K + ++ +D
Sbjct: 430 RTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVL-----ELKKLGIDDLVHFDFMD 484
Query: 447 PPYPEVVGDALDLLDHKRALQ---KISPRGRYEPTF 479
PP PE + AL+ L++ L ++P GR F
Sbjct: 485 PPAPETMMRALEELNYLACLDDEGNLTPLGRLASQF 520
Score = 57 (25.1 bits), Expect = 1.7e-32, Sum P(3) = 1.7e-32
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYD 648
+WC HYL SL + + ++R+ + T P Y+D
Sbjct: 601 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFD 646
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 393 (143.4 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 134/465 (28%), Positives = 221/465 (47%)
Query: 31 LREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE-------NMEPILCTQPRRFXXXX 83
LR++IV V E++VT+I GETG GKS+Q QF+L + + IL TQPRR
Sbjct: 638 LRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANILVTQPRRISALG 697
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRG-------LNAL 136
R ++G EVGY I +++I F T GVLL ++ G +
Sbjct: 698 LADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVSGGRVEDVVASLA 757
Query: 137 KYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGER 196
+++DEVHERS+++D DL++VLMSAT D + YF + G R
Sbjct: 758 DVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASYF--VQDGIR 815
Query: 197 VEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGP-SPSMANAEIKP 255
V + I RT F YL+ V + G +++R + P + ++ N +
Sbjct: 816 VGQVEIAG---RT-FPVTDYYLDDVIRM--TQFGT----ANIRADADPVAKAIQNLGTRI 865
Query: 256 EVHKLIHDLVLHIHKNESDIEKS--ILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVD 313
+ L+ + I S +KS IL+FLP + + +++ L+ V LH+S++
Sbjct: 866 NYNLLV-ETTEAIDNELSLAQKSGGILIFLPGVAEINRACGMLRSLNCLH-VLPLHASLE 923
Query: 314 T-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV 372
T EQ + + RKV++ATN+AE+S+TI + V+D+ + + +D + E
Sbjct: 924 TKEQRKVFVPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEET 983
Query: 373 WVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCA-ES 431
+ S + +QRRGR GR G+ Y+L T+ + + P + +C + +
Sbjct: 984 FASLAACKQRRGRAGRVQAGECYKLYTRKLESQMAERPEPEMRRVPLEQ----LCLSVRA 1039
Query: 432 KAISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL--QKISPRGR 474
I+D + L +A PP V A+ +L L ++++ GR
Sbjct: 1040 MGIADVRGFLARAPTPPEAAAVEGAITMLRRMGCLDGEELTALGR 1084
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 241 (89.9 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 75/207 (36%), Positives = 105/207 (50%)
Query: 33 EKIVEKVLENRVTLIVGETGCGKSSQVPQFLL------------AENME--PILCTQPRR 78
E+I+ + + V +I GETGCGKS+QVPQF+L EN+ I+CTQPRR
Sbjct: 460 ERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRR 519
Query: 79 FXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALK 137
R +G VGY I +S+ +++ F T G+LL + D L ++
Sbjct: 520 LSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVT 579
Query: 138 YKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERV 197
+ +I+DEVHERS ESD DL+V+LMSAT + + DYF G G
Sbjct: 580 H--VIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYF---G-G--A 631
Query: 198 EVLAIPSTNQRTIFQRRVSYLEQVTEL 224
VL IP RT F + +LE + E+
Sbjct: 632 PVLDIPG---RT-FPVQQLFLEDILEM 654
Score = 209 (78.6 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 59/157 (37%), Positives = 87/157 (55%)
Query: 253 IKPEVHKLIHDLVLHIHKNESDI--EKSILVFLPTYYALEQQWH-------LMKPLSSFF 303
I PE LI ++ +I + D E +IL+FLP + + Q H L P + F
Sbjct: 730 INPE---LIESVLKYIVEGSHDWPREGTILIFLPGFGEI-QSVHDSLLDNALFSPRAGKF 785
Query: 304 KVHILHSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 362
+ LHS++ E QAL+ K RK++L+TNIAE+SVTI +V+D + +D
Sbjct: 786 ILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDS 845
Query: 363 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVT 399
NR ++S +LVWVS++ A+QR+GR GR G L T
Sbjct: 846 NRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYT 882
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 247 (92.0 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 62/201 (30%), Positives = 99/201 (49%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R ++ + +N+V +I GETGCGK++Q+PQF+L +E I+CTQPRR
Sbjct: 226 RHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPRRISAMSV 285
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
R +LG VGY + ++++F T G+LL + DR L + + +I+
Sbjct: 286 SERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVTH--VIV 343
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIP 203
DE+HER + D ++L+++LMSAT D + YF G V+ IP
Sbjct: 344 DEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAG------VIYIP 397
Query: 204 STNQRTIFQRRVSYLEQVTEL 224
+ R +LE + E+
Sbjct: 398 GFT----YPVRSHFLEDILEM 414
Score = 201 (75.8 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 69/225 (30%), Positives = 108/225 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWHLMKPLSSFFKVHIL--HSSVDT 314
LI L+ +I +NE IL+FL + +L+++ + + V +L H S++T
Sbjct: 484 LIEFLLCNICENEGP--GGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMET 541
Query: 315 -EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVW 373
EQ L+ + RK++LATNIAE+S+TI VA+VID ++ + +D W
Sbjct: 542 FEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSW 601
Query: 374 VSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA 433
+S+ A+QRRGR GR GQ Y L K + +++ P I I +
Sbjct: 602 ISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGS 661
Query: 434 ISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRGRY 475
IS+ L +AL P V A+ L AL + ++ GRY
Sbjct: 662 ISE---FLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRY 703
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 242 (90.2 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 57/169 (33%), Positives = 94/169 (55%)
Query: 31 LREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXX 83
+++++V + ++VT+I GETGCGK++QV QF+L +E I+CTQPRR
Sbjct: 204 MQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGIGSACRIVCTQPRRISAIS 263
Query: 84 XXXXXXXGR--NCELGGEVGYHIGHSKHLSERS-KIVFKTAGVLLDEMR-DRGLNALKYK 139
R +C G GY I L + I++ T G++L ++ D L+++ +
Sbjct: 264 VAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSH- 322
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
I+LDE+HER+++SD +DL+V+LMSAT + K+ +YF
Sbjct: 323 -IVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYF 370
Score = 215 (80.7 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 70/222 (31%), Positives = 102/222 (45%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 314
LI L+ +I E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 466 LIAALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTV 523
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
Q + K RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 524 NQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 583
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 434
S++ A+QR+GR GR G Y L L+D++ P I I I
Sbjct: 584 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 643
Query: 435 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 473
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 644 A---YFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTPLG 682
Score = 38 (18.4 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 577 RLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSL---HHVS-ELYEDILNA 628
R DHL V F+ + + E+++C ++L ++L H++ + E +L A
Sbjct: 745 RSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGA 800
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 242 (90.2 bits), Expect = 3.1e-32, Sum P(3) = 3.1e-32
Identities = 57/169 (33%), Positives = 94/169 (55%)
Query: 31 LREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXX 83
+++++V + ++VT+I GETGCGK++QV QF+L +E I+CTQPRR
Sbjct: 205 MQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAIS 264
Query: 84 XXXXXXXGR--NCELGGEVGYHIGHSKHLSERS-KIVFKTAGVLLDEMR-DRGLNALKYK 139
R +C G GY I L + I++ T G++L ++ D L+++ +
Sbjct: 265 VAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSH- 323
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
I+LDE+HER+++SD +DL+V+LMSAT + K+ +YF
Sbjct: 324 -IVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYF 371
Score = 214 (80.4 bits), Expect = 3.1e-32, Sum P(3) = 3.1e-32
Identities = 70/222 (31%), Positives = 102/222 (45%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 314
LI L+ +I E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 467 LIAALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTV 524
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
Q + K RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 525 NQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 584
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 434
S++ A+QR+GR GR G Y L L+D++ P I I I
Sbjct: 585 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 644
Query: 435 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 473
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 645 A---YFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLG 683
Score = 38 (18.4 bits), Expect = 3.1e-32, Sum P(3) = 3.1e-32
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 577 RLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSL---HHVS-ELYEDILNA 628
R DHL V F+ + + E+++C ++L ++L H++ + E +L A
Sbjct: 746 RSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGA 801
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 240 (89.5 bits), Expect = 4.6e-32, Sum P(3) = 4.6e-32
Identities = 57/169 (33%), Positives = 94/169 (55%)
Query: 31 LREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXX 83
+++++V + ++VT+I GETGCGK++QV QF+L +E I+CTQPRR
Sbjct: 126 MQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAIS 185
Query: 84 XXXXXXXGR--NCELGGEVGYHIGHSKHLSERS-KIVFKTAGVLLDEMR-DRGLNALKYK 139
R +C G GY I L + I++ T G++L ++ D L+++ +
Sbjct: 186 VAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSH- 244
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
I+LDE+HER+++SD +DL+V+LMSAT + K+ +YF
Sbjct: 245 -IVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYF 292
Score = 209 (78.6 bits), Expect = 4.6e-32, Sum P(3) = 4.6e-32
Identities = 69/222 (31%), Positives = 102/222 (45%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 314
LI L+ +I E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 388 LIVALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTV 445
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
Q + + RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 446 NQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 505
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 434
S++ A+QR+GR GR G Y L L+D++ P I I I
Sbjct: 506 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 565
Query: 435 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 473
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 566 A---YFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLG 604
Score = 39 (18.8 bits), Expect = 4.6e-32, Sum P(3) = 4.6e-32
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 573 KDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSL---HHVS-ELYEDILNA 628
KD R DHL V F+ + + E+++C ++L ++L H++ + E +L A
Sbjct: 664 KDT-RSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGA 722
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 242 (90.2 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
Identities = 62/168 (36%), Positives = 88/168 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLA---ENMEP--ILCTQPRRFXXX 82
V +E+IV+ + EN+V LIVGETG GK++Q+PQFLL EN P I CTQPRR
Sbjct: 105 VFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGVPCRIFCTQPRRLAVI 164
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR--DRGLNALKYKV 140
R ++G VGY I +S R+ + F T G+LL + D L+ + +
Sbjct: 165 AVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDSALSTVTH-- 222
Query: 141 IILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+I+DEVHER SD +L++++ SA D + YF
Sbjct: 223 VIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYF 270
Score = 205 (77.2 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
Identities = 65/213 (30%), Positives = 107/213 (50%)
Query: 263 DLVLHIHKN--ESDIEKSILVFLPTY---YALEQQW-----HLMKPLSSFFKVHILHSSV 312
DL++H+ N S +IL+FLP Y +L + + S ++V +LHS++
Sbjct: 517 DLIMHLLYNICNSSDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNM 576
Query: 313 DTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAEL 371
T +K S RK+IL+TNIAE+S+T+ V +VIDS + + +D + +
Sbjct: 577 QTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKT 636
Query: 372 VWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAES 431
VW+S++ A QRRGR GR G + L ++ F + + + P + C +
Sbjct: 637 VWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQTPELRRMPLQEL-----CLHT 691
Query: 432 KAISD---PKV-LLQKALDPPYPEVVGDALDLL 460
K ++ P V L KA DPP +V +A+ +L
Sbjct: 692 KLLAPVNCPVVDFLMKAPDPPPALIVRNAIQML 724
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 240 (89.5 bits), Expect = 7.6e-32, Sum P(3) = 7.6e-32
Identities = 70/207 (33%), Positives = 106/207 (51%)
Query: 31 LREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXX 83
+RE++V + NRV +I GETGCGK++QV QF+L + ++ ++CTQPRR
Sbjct: 225 MREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCRVVCTQPRRISAIS 284
Query: 84 XXXXXXXGRNCELG-GE-VGYHIGHSKHLSERS-KIVFKTAGVLLDEMR-DRGLNALKYK 139
R +G G+ GY I L + +++ T GV+L + D L+++ +
Sbjct: 285 VAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHSDPYLSSITH- 343
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEV 199
++LDE+HERSV+SD +DL+VVLMSAT + K+ YF + +
Sbjct: 344 -LVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSKYFNNC------PM 396
Query: 200 LAIPSTNQRTIFQRRVSYLEQVTELLG 226
+ IP F LE V ELLG
Sbjct: 397 IHIPGYT----FPVTEYLLEDVVELLG 419
Score = 204 (76.9 bits), Expect = 7.6e-32, Sum P(3) = 7.6e-32
Identities = 70/229 (30%), Positives = 110/229 (48%)
Query: 264 LVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF------FKVHILHSSVDT--E 315
L+ HI NE+ E +ILVFLP + + L+ F F + LHS + T +
Sbjct: 492 LIRHIAVNEN--EGAILVFLPGWDNISTLNDLLMSDQMFKSGRYRFIIIPLHSLMPTVSQ 549
Query: 316 QALMAM--KICKSH----RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSA 369
++++ ++ K RK+++ATNIAE+S+TI V YVID + + +D I +
Sbjct: 550 TQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTM 609
Query: 370 ELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCA 429
WVS + A+QR+GR GR G+ Y L L++++ P I C
Sbjct: 610 TAEWVSIANAKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEEL-----CL 664
Query: 430 ESKAIS-DP-KVLLQKALDPPYPEVVGDALDLLDHKRAL---QKISPRG 473
+ K + P LQK +DPP + A+ L AL +K++P G
Sbjct: 665 QIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLG 713
Score = 47 (21.6 bits), Expect = 7.6e-32, Sum P(3) = 7.6e-32
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 571 VFKDKQRLDHLQQV---LKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILN 627
+F R DHL V L +++ K S + E E+C ++L ++L + +
Sbjct: 770 MFSQNSRSDHLSIVNAFLGWEDAKRQGS---RFEREYCWDNFLSANTLQMLQNMKGQF-- 824
Query: 628 AVHRFRPKFLGTSN 641
A H R F+ + +
Sbjct: 825 AEHLLRAGFVNSKD 838
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 384 (140.2 bits), Expect = 8.7e-32, P = 8.7e-32
Identities = 134/463 (28%), Positives = 206/463 (44%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLL---AENMEP--ILCTQPRRFXXXXXXX 86
RE I+ + ++V +I G TG GKS+Q+PQ++L AE+ P I+ +QPRR
Sbjct: 215 RESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEHRAPVRIVVSQPRRIAAISVSE 274
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKV-IILDE 145
R G VGY+I ++ S + ++ T+G LL + + K +I+DE
Sbjct: 275 RISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDE 334
Query: 146 VHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIPST 205
HER +++D LR+VLMSAT D+ +YF G G ++V
Sbjct: 335 AHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYF---GGGTVMDV------ 385
Query: 206 NQRTIFQRRVSYLEQVTELLGVDHG-MTSELSSLRYCSGPSPSMA-----NAEIKPEV-H 258
+ F+ + +LE + G H M L PS +A N + P++ +
Sbjct: 386 -EGRSFEVSIYHLEDILSKTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTIVHPDIDN 444
Query: 259 KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQW-HLMKPLS-SFFKVHILHSSVDTEQ 316
LI L L + + D +++V+LP Y + L L + +LHS VD +
Sbjct: 445 DLIVSL-LELLLRQGDAG-AVIVYLPGYSDMTSLLARLESSLPREQITIILLHSQVDNSE 502
Query: 317 ALMAMKICKSHR-KVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVS 375
+ R K+IL+TNI ++S+TIP + YVID+ + +D L W+S
Sbjct: 503 QRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWIS 562
Query: 376 QSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 435
Q+ A+QR GR GR C G YRL + + P I IC A
Sbjct: 563 QADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPEIMRRTLDE----ICLLTKLAAP 618
Query: 436 DPKV--LLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRG 473
D K+ L ALD P + V + L LL +++P G
Sbjct: 619 DKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLG 661
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 240 (89.5 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 57/169 (33%), Positives = 94/169 (55%)
Query: 31 LREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXX 83
+++++V + ++VT+I GETGCGK++QV QF+L +E I+CTQPRR
Sbjct: 212 MQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAIS 271
Query: 84 XXXXXXXGR--NCELGGEVGYHIGHSKHLSERS-KIVFKTAGVLLDEMR-DRGLNALKYK 139
R +C G GY I L + I++ T G++L ++ D L+++ +
Sbjct: 272 VAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSH- 330
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
I+LDE+HER+++SD +DL+V+LMSAT + K+ +YF
Sbjct: 331 -IVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYF 378
Score = 209 (78.6 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 69/222 (31%), Positives = 102/222 (45%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 314
LI L+ +I E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 474 LIVALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTV 531
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
Q + + RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 532 NQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 591
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 434
S++ A+QR+GR GR G Y L L+D++ P I I I
Sbjct: 592 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 651
Query: 435 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 473
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 652 A---YFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLG 690
Score = 39 (18.8 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 573 KDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSL---HHVS-ELYEDILNA 628
KD R DHL V F+ + + E+++C ++L ++L H++ + E +L A
Sbjct: 750 KDT-RSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGA 808
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 239 (89.2 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 60/168 (35%), Positives = 90/168 (53%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME---P-----ILCTQPRRFXXXX 83
RE I+E +++N+V +I G TGCGK++Q+PQF+L ++ P I+CTQPRR
Sbjct: 588 REAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRPDRVANIICTQPRRISAIA 647
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVII 142
R LG GY I S ++++F T GVLL + D L+ + + +I
Sbjct: 648 VATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLEGDPELSGVTH--VI 705
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRD 190
+DEVHER+ ESD DL+V++MSAT + + YF +
Sbjct: 706 VDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFNN 753
Score = 204 (76.9 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 66/201 (32%), Positives = 102/201 (50%)
Query: 228 DHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKS-----ILVF 282
D ++ + ++RY S S S+ ++ K+ DLV + + D + S +LVF
Sbjct: 838 DQQLSQQDLTVRY-SNYSKSVVKTLAAMDLDKINMDLVESLLEWIVDGDHSYPPGAVLVF 896
Query: 283 LPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRKVILAT 334
LP ++Q + ++ F V+ LHSS+ E Q + + K+I++T
Sbjct: 897 LPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVTKIIIST 956
Query: 335 NIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQV 394
NIAE+SVTI V YVIDS R + +D +R ++S E VWVS++ A QR+GR GR G
Sbjct: 957 NIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGRVASGVC 1016
Query: 395 YRLVTKSFFGT-LEDHECPAI 414
+ L T F L + P I
Sbjct: 1017 FHLFTSHRFEHHLSQQQLPEI 1037
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 263 (97.6 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 72/228 (31%), Positives = 111/228 (48%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM-----EPILCTQPRRFXXX 82
V + RE+ ++ ++ + VGETG GK++Q+PQF+L + M + + CTQPRR
Sbjct: 96 VHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGKQVACTQPRRVAAM 155
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVI 141
+ ELG EVGY+I + ++ + + T G+LL E M D L +Y I
Sbjct: 156 SVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMEDHDLT--RYSCI 213
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGE 195
ILDE HER++ +D DL++++MSAT D K+++YF + GR
Sbjct: 214 ILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAPLLAVPGRTH 273
Query: 196 RVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSG 243
VE+ P FQR YL+ + H E L + +G
Sbjct: 274 PVEIYYTPE------FQR--DYLDAAIRTVLQIHATEGEGDILLFLTG 313
Score = 171 (65.3 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 52/156 (33%), Positives = 82/156 (52%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKVI++TNIAE+S+TI + YV+D S Q ++ +++S + +S++ A+QR GR G
Sbjct: 373 RKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAG 432
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T+ F L + P I E K + ++ +D
Sbjct: 433 RTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVL-----ELKKLGIDDLVHFDFMD 487
Query: 447 PPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGR 482
PP PE + AL+ L++ LQ +S G + T GR
Sbjct: 488 PPAPETMMRALEELNY---LQCLSDEG--DLTALGR 518
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 263 (97.6 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 64/173 (36%), Positives = 92/173 (53%)
Query: 43 RVTLIVGETGCGKSSQVPQFLL----AENMEPILCTQPRRFXXXXXXXXXXXGRNCELGG 98
R +IVGETGCGKS+QVPQFLL A + I+ TQPRR ++C LG
Sbjct: 94 RTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGH 153
Query: 99 EVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESDXXXX 158
+VGY + + +K+ F T G+LL E+ L + KY +I++DE HERS +D
Sbjct: 154 DVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLS-KYSIIMIDEAHERSCNTDILLG 212
Query: 159 XXXXXXXXXNDLRVVLMSATADITKYRDYFR--DLGRGERVEVLAIPSTNQRT 209
NDLR+++ SAT D ++D+F + G ++ + I S RT
Sbjct: 213 LLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDK-DTAGIISVEGRT 264
Score = 170 (64.9 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 60/160 (37%), Positives = 84/160 (52%)
Query: 263 DLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMA-- 320
D V++IHK+E+ + ILVFL +E ++ L+ K V AL A
Sbjct: 285 DTVINIHKHENPGD--ILVFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPARE 342
Query: 321 -MKICKS--H--RKVILATNIAESSVTIPKVAYVIDSCR-SLQVFWDVNRKIDSAELVWV 374
MK S H RKV++ATNIAE+S+TIP + YVID+ L+ N +++ V V
Sbjct: 343 QMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANG-VETLMRVTV 401
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 414
S++ AEQR GR GR G+ YRL +S F + P I
Sbjct: 402 SKASAEQRAGRAGRIRPGKCYRLYPESEFERFAEGTVPEI 441
Score = 45 (20.9 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 602 EEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGL 643
++WCS H++ L + ++ + RF + + +S GL
Sbjct: 581 KKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKV-SSRGL 621
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 247 (92.0 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 56/167 (33%), Positives = 88/167 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL----LAENMEPILCTQPRRFXXXX 83
V + R+ +E V E++V +I GETG GK++Q+PQ+L E + I CTQPRR
Sbjct: 366 VYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMS 425
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
C+LG +VGY I SE++ + + T G+LL E + + Y V+++
Sbjct: 426 VAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEP-DLASYSVMMI 484
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRD 190
DE HER++ +D DL++++ SAT D K+ +F D
Sbjct: 485 DEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDD 531
Score = 190 (71.9 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 77/227 (33%), Positives = 113/227 (49%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQ-QWHLM---KPLSSFFKVHI---LHSSVDTE-Q 316
++ IH + + ILVFL +E Q LM K L S K I +++++ ++ Q
Sbjct: 564 IMQIHLTQP-LPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQ 622
Query: 317 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
A + K RKV+LATNIAE+SVTI + YVID S Q +D ++ +V +S+
Sbjct: 623 AKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK 682
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 435
+ A QR GR GRT G+ +RL T ++ LE+ P I + +S I
Sbjct: 683 AAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNV---VLMLKSLGIH 739
Query: 436 DPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGR 482
D ++ LDPP E + AL+ L AL ++ RG E T GR
Sbjct: 740 D--LVHFDFLDPPPQETLVIALEQL---YALGALNHRG--ELTKLGR 779
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 247 (92.0 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 56/167 (33%), Positives = 88/167 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL----LAENMEPILCTQPRRFXXXX 83
V + R+ +E V E++V +I GETG GK++Q+PQ+L E + I CTQPRR
Sbjct: 366 VYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMS 425
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
C+LG +VGY I SE++ + + T G+LL E + + Y V+++
Sbjct: 426 VAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEP-DLASYSVMMI 484
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRD 190
DE HER++ +D DL++++ SAT D K+ +F D
Sbjct: 485 DEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDD 531
Score = 190 (71.9 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 77/227 (33%), Positives = 113/227 (49%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQ-QWHLM---KPLSSFFKVHI---LHSSVDTE-Q 316
++ IH + + ILVFL +E Q LM K L S K I +++++ ++ Q
Sbjct: 564 IMQIHLTQP-LPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQ 622
Query: 317 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
A + K RKV+LATNIAE+SVTI + YVID S Q +D ++ +V +S+
Sbjct: 623 AKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK 682
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 435
+ A QR GR GRT G+ +RL T ++ LE+ P I + +S I
Sbjct: 683 AAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNV---VLMLKSLGIH 739
Query: 436 DPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGR 482
D ++ LDPP E + AL+ L AL ++ RG E T GR
Sbjct: 740 D--LVHFDFLDPPPQETLVIALEQL---YALGALNHRG--ELTKLGR 779
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 392 (143.0 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 127/442 (28%), Positives = 214/442 (48%)
Query: 32 REKIVEKVL-ENRVTLIVGETGCGKSSQVPQFLL----AENME----PILCTQPRRFXXX 82
++K++ ++ +N V LI GETG GKS+QV QF+L E + I+CTQPRR
Sbjct: 609 KQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKGDFGKTKIVCTQPRRISAI 668
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVII 142
R G EVGY I ++I F T GVL+ + L+ +++
Sbjct: 669 GLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLV-RLLQNARTMLENTIVV 727
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAI 202
+DEVHERS+++D +++VLMSAT ++ ++ +F L +E
Sbjct: 728 IDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPGLATCH-IEGRTF 786
Query: 203 PSTNQRTIFQRRVSYLE---QVTELLGVDHGMTSELSSL-RYCSGPSPS--MANAEIKPE 256
P T+ + +S L+ + + L D E ++ +Y + S + +I
Sbjct: 787 PITDY--FLEDILSDLDFKIKREKALSYDDDSVDERNNDDQYLKPRADSKFFTSGQIN-- 842
Query: 257 VHKLIHDLVLHIHKN--ESDIEKSILVFLPTYYALEQQWHLM--KPLSSFFKVHILHSSV 312
+ L+ +V ++HK ++ SI+VFLP + + +L+ K + F V LHS++
Sbjct: 843 -YDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNEADFMVLPLHSAL 901
Query: 313 DTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV 372
E K RKV+++TNIAE+S+TI ID+ R+ +F+ N K ++ +L+
Sbjct: 902 TPEDQKRVFKKYHGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFY--NPKDNTTKLI 959
Query: 373 --WVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCA 429
++S+++ +QRRGR GR +G Y+L +K+ + + P I +
Sbjct: 960 ESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSV--- 1016
Query: 430 ESKAISDPKVLLQKALD-PPYP 450
++ I D K L ALD PP P
Sbjct: 1017 KAMGIKDVKAFLSTALDAPPLP 1038
Score = 44 (20.5 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 892 EVKCVLWYPSLESYSENLESQKTLMQNFFEHLAIRMLADALYDTRVIITMNNIKFA 947
E K + ++ E Y + LE KT + + + + L L TR I +++ F+
Sbjct: 1240 EAKMIKYWIRSEEYQDKLEEYKTKISQETQKVDLEDLP--LPATRAFIHPSSVLFS 1293
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 252 (93.8 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 73/218 (33%), Positives = 107/218 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQ----FLLAENM-EP------ILCTQP 76
V +EK +E + N+ +VGETG GK++Q+PQ F+ + +P + CTQP
Sbjct: 78 VWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQP 137
Query: 77 RRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNAL 136
RR + LG EVGY I +SER+ + + T G+LL E + L
Sbjct: 138 RRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSPLLD- 196
Query: 137 KYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL----- 191
KYKV+ILDE HER++ +D D++VV+MSAT D K++ YF D
Sbjct: 197 KYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSV 256
Query: 192 -GRGERVEVLAIPSTNQRTIFQ--RRVSYLEQVTELLG 226
GR VE+ P+ + + R V + V E+ G
Sbjct: 257 PGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEG 294
Score = 179 (68.1 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 45/140 (32%), Positives = 79/140 (56%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RK +++TNIAE+S+TI V +VID S Q ++ +++S + +S++ A QR GR G
Sbjct: 359 RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAG 418
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T++ +G+ ++D P I + K + ++ +D
Sbjct: 419 RTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQL-----KKLGTEDLVHFDFMD 473
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL+LL++ +A+
Sbjct: 474 PPAPETLMRALELLNYLQAI 493
Score = 37 (18.1 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 844 PSRIISTTCLSDSAICDTSL 863
P+ IS C+ + I +TSL
Sbjct: 353 PNGAISRKCVISTNIAETSL 372
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 252 (93.8 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 73/218 (33%), Positives = 107/218 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQ----FLLAENM-EP------ILCTQP 76
V +EK +E + N+ +VGETG GK++Q+PQ F+ + +P + CTQP
Sbjct: 78 VWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQP 137
Query: 77 RRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNAL 136
RR + LG EVGY I +SER+ + + T G+LL E + L
Sbjct: 138 RRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSPLLD- 196
Query: 137 KYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL----- 191
KYKV+ILDE HER++ +D D++VV+MSAT D K++ YF D
Sbjct: 197 KYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSV 256
Query: 192 -GRGERVEVLAIPSTNQRTIFQ--RRVSYLEQVTELLG 226
GR VE+ P+ + + R V + V E+ G
Sbjct: 257 PGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEG 294
Score = 179 (68.1 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 45/140 (32%), Positives = 79/140 (56%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RK +++TNIAE+S+TI V +VID S Q ++ +++S + +S++ A QR GR G
Sbjct: 359 RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAG 418
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T++ +G+ ++D P I + K + ++ +D
Sbjct: 419 RTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQL-----KKLGTEDLVHFDFMD 473
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL+LL++ +A+
Sbjct: 474 PPAPETLMRALELLNYLQAI 493
Score = 37 (18.1 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 844 PSRIISTTCLSDSAICDTSL 863
P+ IS C+ + I +TSL
Sbjct: 353 PNGAISRKCVISTNIAETSL 372
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 230 (86.0 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 50/165 (30%), Positives = 86/165 (52%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
++ +++ + N+V ++ GETGCGK++Q+PQ++L +E I+CTQPRR
Sbjct: 305 KDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISV 364
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
R ++G VGY + ++++F T GVLL + DR L + + +++
Sbjct: 365 SERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTH--VVV 422
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE+HER + D DL+++LMSAT + + YF
Sbjct: 423 DEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYF 467
Score = 207 (77.9 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 67/224 (29%), Positives = 110/224 (49%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWHLMKPLSSFFKVHIL--HSSV-D 313
LI +++ HI K E ++LVF+ + +L+ Q L KV +L H S+
Sbjct: 564 LIENVLCHIVKGERP--GAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMAS 621
Query: 314 TEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVW 373
+EQ L+ + + RK++LATN+AE+S+TI V YVID ++ + +D W
Sbjct: 622 SEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSW 681
Query: 374 VSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA 433
+S++ A QRRGR GR G+ Y L + + D++ P + I +
Sbjct: 682 ISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGS 741
Query: 434 ISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL---QKISPRGR 474
IS+ L +AL PP V +A++ L AL + ++P G+
Sbjct: 742 ISE---FLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGK 782
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 236 (88.1 bits), Expect = 8.0e-31, Sum P(2) = 8.0e-31
Identities = 59/165 (35%), Positives = 90/165 (54%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-P------ILCTQPRRFXXXXX 84
RE I++ + E++V +I G TGCGK++Q+PQF+L +++ P I+CTQPRR
Sbjct: 546 RETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEKVANIICTQPRRISAISV 605
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
R +G VGY I S +++++ T GVLL + D L + + II+
Sbjct: 606 AERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTSLQGVTH--IIV 663
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DEVHER+ ESD +L+V+LMSAT + + +YF
Sbjct: 664 DEVHERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELFSEYF 708
Score = 200 (75.5 bits), Expect = 8.0e-31, Sum P(2) = 8.0e-31
Identities = 63/208 (30%), Positives = 104/208 (50%)
Query: 278 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 329
+ILVFLP ++ + ++ S F VH LHSS+ +E Q + +K K
Sbjct: 845 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVTK 904
Query: 330 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 389
+I++TNIAE+S+TI V YVIDS + + +D ++ ++S E +VSQ+ A QR+GR GR
Sbjct: 905 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 964
Query: 390 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 448
G + L T F L + P I I E + + + + + ++PP
Sbjct: 965 ASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPP 1024
Query: 449 YPEVVGDALDLLDHKRAL---QKISPRG 473
+ + + + L AL +K++P G
Sbjct: 1025 HTDSLRASKIRLRDLGALTPDEKLTPLG 1052
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 378 (138.1 bits), Expect = 8.0e-31, P = 8.0e-31
Identities = 133/464 (28%), Positives = 219/464 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME----P---ILCTQPRRFX 80
+ R ++E + N++ +I+G+TGCGK++Q+PQF++ + ++ P I+ TQPRR
Sbjct: 719 IFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMIDSGHAPYCNIVMTQPRRIS 778
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSK-HLSERSKIVFKTAGVLLDEM-RDRGLNALKY 138
R ++G VGY I SK++ T G+LL M D L+ + +
Sbjct: 779 VLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGILLKRMYSDMKLHNVSH 838
Query: 139 KVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVE 198
+ +DEVHER + +D N+LRV+LMSAT D + YF G
Sbjct: 839 --LFIDEVHERDIHTDFLLIILKKLLADNNNLRVILMSATMDNSLVSAYF-----GT-CP 890
Query: 199 VLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH 258
V+ + T+ I Q +LE +++ L D ++ Y S + + I +
Sbjct: 891 VIKL--TSYHHIAQEY--FLEDISKQLN-D-------PTISYRDEQSDDVDHEMI---LQ 935
Query: 259 KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQ--QWHLMKPLSSFFKVHILHSSVDTE- 315
++H +V + D L + + H M + F + LHSSV +
Sbjct: 936 LIVH-IVTKVSSTSEDSILIFLPGWEDISQTRELMRRHPMLRNENEFLILPLHSSVSMQL 994
Query: 316 QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVS 375
QA + K RK++L+TNIAE+S+TI V YVIDS + + + R + + VW
Sbjct: 995 QAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHETQRDLTLFQTVWAC 1054
Query: 376 QSQAEQRRGRTGRTC-DGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 434
+S +QRRGR GR DG Y +V++ + TLE+ + + C + K +
Sbjct: 1055 KSSLKQRRGRAGRVRKDGVCYHMVSRDRYNTLEEFQLSEMRRMPLHEL-----CLQVKVL 1109
Query: 435 --SDPKVLLQKALDPPYPEVVGDALDLLDHKRAL---QKISPRG 473
D L +AL+PP + + +A++LL AL Q+++P G
Sbjct: 1110 VLGDVIGFLSEALEPPETKSIDNAINLLIDLGALNANQELTPLG 1153
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 235 (87.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 61/168 (36%), Positives = 87/168 (51%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE---NMEP--ILCTQPRRFXXX 82
V +E+IV+ + EN+V LIVGETG GK++Q+PQFLL + N P I CTQPRR
Sbjct: 194 VFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAI 253
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR--DRGLNALKYKV 140
R +G +GY I +S ++ + F T GVLL + D L+ + +
Sbjct: 254 AVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTH-- 311
Query: 141 IILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+I+DEVHER SD L+++L SA D+ + YF
Sbjct: 312 VIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 359
Score = 196 (74.1 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 73/266 (27%), Positives = 127/266 (47%)
Query: 215 VSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH------KLIHDLVLHI 268
V LE + L + G E SSL + +G S + E+ H K+ DL++H+
Sbjct: 555 VDLLESYSASL--EFGNLDE-SSLVHTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 611
Query: 269 HKN--ESDIEKSILVFLPTYYALEQ-QWHLMKPLSSF------FKVHILHSSVDTEQALM 319
N +IL+FLP Y + + ++ F ++V +LHS++ T
Sbjct: 612 LYNICHGCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKK 671
Query: 320 AMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 378
+K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++VW+S++
Sbjct: 672 VLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 731
Query: 379 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPK 438
A QR+GR GR G +RL ++ F + + + P + C +K ++
Sbjct: 732 AVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQEL-----CLHTKLLAPVN 786
Query: 439 V----LLQKALDPPYPEVVGDALDLL 460
L KA +PP +V +A+ +L
Sbjct: 787 CPIADFLMKAPEPPPALIVRNAVQML 812
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 238 (88.8 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 68/198 (34%), Positives = 93/198 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-----AENMEPILCTQPRRFXXX 82
V LR I+ V + +IVGETGCGKS+QVPQ+L AE + TQPRR
Sbjct: 56 VFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEG-RVVGVTQPRRVAAV 114
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
R LG EVGY I ++I F T G+L+ EM L KY V+
Sbjct: 115 TVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL-LTKYSVV 173
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLA 201
+LDE HER++ +D DLR+++ SAT D K+RD+F +
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTC 233
Query: 202 IPSTNQRTIFQRRVSYLE 219
+ T + F + YL+
Sbjct: 234 VILTVEGRTFPVDIFYLQ 251
Score = 187 (70.9 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLP------TYYAL--EQQWHLMKP-LSSFFKV 305
P+ K D V+ IH+ E D + IL FL T ++ EQ L + + +V
Sbjct: 255 PDYIKATVDTVVKIHQTEGDGD--ILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRV 312
Query: 306 HILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 363
+++ + + EQ + ++ S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVID-CGFMKLRAYNPR 371
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 423
I+ +V VSQ+ A QR GR GR G+ YRL T+ F L P +
Sbjct: 372 TAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVV 431
Query: 424 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDSVLRFHFMSPPPAQSMVQALELL 463
Score = 44 (20.5 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 644
+WC H+L L + + + + + +F+ PK +S G P
Sbjct: 563 QWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKM--SSEGDP 603
Score = 37 (18.1 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 15/75 (20%), Positives = 32/75 (42%)
Query: 780 DSCIFSHDLGQPVLPSSSF---TCLPEDGVANAASLLRLFPTSSDGSILLLDDTDMHFSA 836
D+C+ G+ P F + +P+ A +++++ T DG IL
Sbjct: 231 DTCVILTVEGR-TFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVET 289
Query: 837 NLACLYDPSRIISTT 851
++ L + +R ++ T
Sbjct: 290 VVSMLIEQARALART 304
>FB|FBgn0003483 [details] [associations]
symbol:spn-E "spindle E" species:7227 "Drosophila
melanogaster" [GO:0007315 "pole plasm assembly" evidence=NAS]
[GO:0030720 "oocyte localization involved in germarium-derived egg
chamber formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0009951 "polarity specification of dorsal/ventral
axis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0009949 "polarity specification of anterior/posterior axis"
evidence=IMP] [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0008298 "intracellular mRNA
localization" evidence=IMP;TAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase
activity" evidence=TAS] [GO:0006403 "RNA localization"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003724
"RNA helicase activity" evidence=TAS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0009994 "oocyte differentiation"
evidence=NAS] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007317 "regulation of pole plasm oskar
mRNA localization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0046843
"dorsal appendage formation" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0009949 GO:GO:0007294
GO:GO:0008270 GO:GO:0007283 GO:GO:0003676 GO:GO:0006342
GO:GO:0030423 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0007076 GO:GO:0001556 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0046843 GO:GO:0030720 GO:GO:0030717
eggNOG:COG1643 GeneTree:ENSGT00700000104393 GO:GO:0060213
GO:GO:0008026 GO:GO:0045451 GO:GO:0003724 GO:GO:0043186
GO:GO:0007317 GO:GO:0008186 GO:GO:0009951 EMBL:S79915 EMBL:BT029921
EMBL:BT100306 PIR:T13889 RefSeq:NP_476741.1 UniGene:Dm.21664
ProteinModelPortal:Q9VF26 SMR:Q9VF26 STRING:Q9VF26 PaxDb:Q9VF26
PRIDE:Q9VF26 EnsemblMetazoa:FBtr0083183 GeneID:41919
KEGG:dme:Dmel_CG3158 UCSC:CG3158-RA CTD:41919 FlyBase:FBgn0003483
InParanoid:Q9VF26 OMA:INDWFTI OrthoDB:EOG4V6WXM PhylomeDB:Q9VF26
GenomeRNAi:41919 NextBio:826268 Bgee:Q9VF26 Uniprot:Q9VF26
Length = 1434
Score = 382 (139.5 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 148/547 (27%), Positives = 230/547 (42%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRFXXX 82
+ + RE+I+ + + V +I GETGCGK++QVPQ++L E + I+ TQPRR
Sbjct: 117 IYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRIAAI 176
Query: 83 XXXXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
R + + +G H + E +++++ T GVLL+ + + Y I
Sbjct: 177 SIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNK-TLTHYTHI 235
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXN-DLRVVLMSATADITKYRDYFRDLGRGERVEVL 200
+LDEVHER D + ++++LMSAT D + DYF +
Sbjct: 236 VLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFTTTN-----SIP 290
Query: 201 AIPSTNQRTIFQRRVSYLEQVTELL----GVDHGMTSELSSLRYCSGPSPSMA--NAEIK 254
+ +TN R Y +Q+ ++ V H E++ Y + + N E K
Sbjct: 291 PVITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNMERK 350
Query: 255 PEVH-KLIHDLVLHIHKNESDIEKSILVFLPTYYALE---QQWHLMKPLSSFFKVHILHS 310
+ + +D L ++L+FLP Y ++ + M KV I+
Sbjct: 351 AAIQSRQSYDEALRYG--------AVLIFLPGIYEIDTMAENLTCMLENDPNIKVSIVRC 402
Query: 311 -SVDT--EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKID 367
S+ T Q + RK+IL TNIAESS+T+P V+YVID C + D
Sbjct: 403 FSLMTPENQRDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFS 462
Query: 368 SAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECP--AIXXXXXXXXXXX 425
S L W S++ QR GR GR G+VYR+V K F+ E P I
Sbjct: 463 SLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFY----QREMPEFGIPEMLRLPLQNS 518
Query: 426 ICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFY 480
+ A+ + P +L AL PP + + + LL AL ++ G Y+P T++
Sbjct: 519 VLKAKVLNMGSPVEILALALSPPNLSDIHNTILLLKEVGALY-LTVDGIYDPLDGDLTYW 577
Query: 481 GRXXXXXXXXXXXXXXXXKFGEI-GMLREGILLGILMDTQPLPILHPFGDDALFAEYTGC 539
G G I ML E I++ + T L H G L +
Sbjct: 578 GTIMSRLPLDTRQSRLII-LGYIFNMLEEAIIIAAGLSTPGL-FAHEGGRSQLGDSFWMH 635
Query: 540 YFGGDGN 546
Y DG+
Sbjct: 636 YIFSDGS 642
Score = 46 (21.3 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 26/99 (26%), Positives = 40/99 (40%)
Query: 644 PTYYDPYEFEHTCLLNCDPPRDMDPLAADNE---HLGPSFEAKKCVAVPFVAPNQFQSNN 700
P +PY EH L+N D D + N+ ++ F K P V+ N+ S
Sbjct: 1252 PDTNEPYFAEHDVLINLDVNILEDDVILINQIRYYIDSVFFNFKEENNPAVSVNERVS-- 1309
Query: 701 VAEKLASIIKEIRVQYVEDVSGNQDKAVNGSETPGEAPL 739
+ +L S+I + + + N A ET E PL
Sbjct: 1310 IYTQLRSLINRLLCKDRRYIERNMSNADFEWETNPELPL 1348
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 234 (87.4 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 59/165 (35%), Positives = 88/165 (53%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-P------ILCTQPRRFXXXXX 84
RE I+ + +++V +I G TGCGK++Q+PQF+L +++ P I+CTQPRR
Sbjct: 550 RETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISV 609
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
R +G VGY I S +++++ T GVLL + D L + + II+
Sbjct: 610 AERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGVSH--IIV 667
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DEVHER+ ESD L+V+LMSAT + + DYF
Sbjct: 668 DEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYF 712
Score = 198 (74.8 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 62/212 (29%), Positives = 104/212 (49%)
Query: 278 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 329
+ILVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 849 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTK 908
Query: 330 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 389
+I++TNIAE+S+TI V YVIDS + + +D ++ ++S E +VSQ+ A QR+GR GR
Sbjct: 909 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 968
Query: 390 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 448
G + L T + L + P I I E + + + + + ++PP
Sbjct: 969 ASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPP 1028
Query: 449 YPEVVGDALDLLDHKRALQKISPRGRYEPTFY 480
+ + + + L R L ++P R P Y
Sbjct: 1029 HTDSLRASKIRL---RDLGALTPDERLTPLGY 1057
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 238 (88.8 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 68/198 (34%), Positives = 93/198 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-----AENMEPILCTQPRRFXXX 82
V LR I+ V + +IVGETGCGKS+QVPQ+L AE + TQPRR
Sbjct: 56 VFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEG-RVVGVTQPRRVAAV 114
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
R LG EVGY I ++I F T G+L+ EM L KY V+
Sbjct: 115 TVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL-LTKYSVV 173
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLA 201
+LDE HER++ +D DLR+++ SAT D K+RD+F +
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTC 233
Query: 202 IPSTNQRTIFQRRVSYLE 219
+ T + F + YL+
Sbjct: 234 VILTVEGRTFPVDIFYLQ 251
Score = 187 (70.9 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLP------TYYAL--EQQWHLMKP-LSSFFKV 305
P+ K D V+ IH+ E D + IL FL T ++ EQ L + + +V
Sbjct: 255 PDYIKATVDTVVKIHQTEGDGD--ILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRV 312
Query: 306 HILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 363
+++ + + EQ + ++ S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVID-CGFMKLRAYNPR 371
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 423
I+ +V VSQ+ A QR GR GR G+ YRL T+ F L P +
Sbjct: 372 TAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVV 431
Query: 424 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDSVLRFHFMSPPPAQSMVQALELL 463
Score = 44 (20.5 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 644
+WC H+L L + + + + + +F+ PK +S G P
Sbjct: 563 QWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKM--SSEGDP 603
Score = 37 (18.1 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
Identities = 15/75 (20%), Positives = 32/75 (42%)
Query: 780 DSCIFSHDLGQPVLPSSSF---TCLPEDGVANAASLLRLFPTSSDGSILLLDDTDMHFSA 836
D+C+ G+ P F + +P+ A +++++ T DG IL
Sbjct: 231 DTCVILTVEGR-TFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVET 289
Query: 837 NLACLYDPSRIISTT 851
++ L + +R ++ T
Sbjct: 290 VVSMLIEQARALART 304
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 240 (89.5 bits), Expect = 3.0e-30, Sum P(3) = 3.0e-30
Identities = 67/198 (33%), Positives = 94/198 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-----AENMEPILCTQPRRFXXX 82
V LR I+ + + +IVGETGCGKS+Q+PQ+L AE + TQPRR
Sbjct: 56 VFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEG-RVVGVTQPRRVAAV 114
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
R LG EVGY I + ++I F T G+L+ EM L KY VI
Sbjct: 115 TVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL-LTKYSVI 173
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLA 201
+LDE HER++ +D DLR+++ SAT D K+RD+F +
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTC 233
Query: 202 IPSTNQRTIFQRRVSYLE 219
+ T + F + YL+
Sbjct: 234 VILTVEGRTFPVDIFYLQ 251
Score = 184 (69.8 bits), Expect = 3.0e-30, Sum P(3) = 3.0e-30
Identities = 65/217 (29%), Positives = 108/217 (49%)
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLP------TYYAL--EQQWHLMKP-LSSFFKV 305
P+ K + V+ IH+ E D + +L FL T ++ EQ L + + +V
Sbjct: 255 PDYIKSTVETVVKIHQTEGDGD--VLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 312
Query: 306 HILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 363
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 371
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 423
I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 372 TAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVI 431
Query: 424 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 463
Score = 43 (20.2 bits), Expect = 3.0e-30, Sum P(3) = 3.0e-30
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 601 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 644
+ +WC H+L L + + E + + +F+ P+ +S G P
Sbjct: 561 DSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPR--KSSEGDP 603
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 234 (87.4 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 56/165 (33%), Positives = 89/165 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE---NMEPILCTQPRRFXXXXX 84
V ++R ++++ V +N+ +IVGETG GK++Q+ Q+L E N I CTQPRR
Sbjct: 485 VYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAVSV 544
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
C++G +VGY I ++I + T G+L E + D ++ KY VI+L
Sbjct: 545 AKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMS--KYSVIML 602
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HER+V +D +L+V++ SAT + K+ +YF
Sbjct: 603 DEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYF 647
Score = 194 (73.4 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 70/221 (31%), Positives = 113/221 (51%)
Query: 263 DLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLS-SFFKVHIL--HSSVDTE 315
D V+ IH NE + ILVFL ++ ++ K L S ++ IL +S++ +E
Sbjct: 680 DCVIDIHINEGPGD--ILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSE 737
Query: 316 -QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
Q+ + K RKV+ ATNIAE+S+TI + YV+D + ++ I+ + +
Sbjct: 738 IQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPI 797
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKS-FFGTLEDHECPAIXXXXXXXXXXXICCAESKA 433
SQ+QA QR+GR GRT G+ YRL T+S F+ + ++ P I I ++
Sbjct: 798 SQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHT---ILMLKAMG 854
Query: 434 ISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGR 474
I+D +L +DPP ++ +AL L H LQ + G+
Sbjct: 855 IND--LLKFDFMDPPPKNLMLNALTELYH---LQSLDDEGK 890
Score = 38 (18.4 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 12/47 (25%), Positives = 19/47 (40%)
Query: 690 FVAPNQFQSNNVAEKLASIIKEIRVQYVEDVSGNQDKAVNGSETPGE 736
+V F N+ A I +++ V + NQ K G PG+
Sbjct: 771 YVVDPGFAKINIYNARAGI-EQLIVSPISQAQANQRKGRAGRTGPGK 816
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 237 (88.5 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 52/165 (31%), Positives = 88/165 (53%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
+E++++ + N+V ++ GETGCGK++Q+PQ++L +E I+CTQPRR
Sbjct: 266 KERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAV 325
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEM-RDRGLNALKYKVIIL 143
R LG VG+ + + + ++F T+G+LL + DR LN + + + +
Sbjct: 326 SERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNGVTH--VFV 383
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE+HER + D DLR+VLMSAT + + +Y+
Sbjct: 384 DEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYY 428
Score = 191 (72.3 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 62/215 (28%), Positives = 102/215 (47%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWHLMKPLSSFFKVHIL--HSSVDT 314
LI ++ HI + E ++LVFL + +L Q L +V +L H S+ T
Sbjct: 525 LIEAVLCHICRKERP--GAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMAT 582
Query: 315 -EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVW 373
EQ L+ + + RK++LATN+AE+S+TI V +V+D ++ + +D W
Sbjct: 583 AEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSW 642
Query: 374 VSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA 433
+SQ+ A QRRGR GR G+ Y L K + +++ P + I + ++
Sbjct: 643 ISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVES 702
Query: 434 ISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK 468
I++ L AL P V +A+ L AL +
Sbjct: 703 IAE---FLSAALQAPESLAVQNAIGFLKMIGALDE 734
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 240 (89.5 bits), Expect = 3.6e-30, Sum P(3) = 3.6e-30
Identities = 67/198 (33%), Positives = 94/198 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-----AENMEPILCTQPRRFXXX 82
V LR I+ + + +IVGETGCGKS+Q+PQ+L AE + TQPRR
Sbjct: 56 VFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEG-RVVGVTQPRRVAAV 114
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
R LG EVGY I + ++I F T G+L+ EM L KY VI
Sbjct: 115 TVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL-LTKYSVI 173
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLA 201
+LDE HER++ +D DLR+++ SAT D K+RD+F +
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTC 233
Query: 202 IPSTNQRTIFQRRVSYLE 219
+ T + F + YL+
Sbjct: 234 VILTVEGRTFPVDIFYLQ 251
Score = 184 (69.8 bits), Expect = 3.6e-30, Sum P(3) = 3.6e-30
Identities = 65/217 (29%), Positives = 108/217 (49%)
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLP------TYYAL--EQQWHLMKP-LSSFFKV 305
P+ K + V+ IH+ E D + +L FL T ++ EQ L + + +V
Sbjct: 255 PDYIKSTVETVVKIHQTEGDGD--VLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 312
Query: 306 HILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 363
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 371
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 423
I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 372 TAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVI 431
Query: 424 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 463
Score = 43 (20.2 bits), Expect = 3.6e-30, Sum P(3) = 3.6e-30
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 601 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 644
+ +WC H+L L + + E + + +F+ P+ +S G P
Sbjct: 561 DSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPR--KSSEGDP 603
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 252 (93.8 bits), Expect = 3.8e-30, Sum P(3) = 3.8e-30
Identities = 60/169 (35%), Positives = 90/169 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-----PILCTQPRRFXXX 82
V RE+ ++ EN++ + VGETG GK++Q+PQF+L + + I CTQPRR
Sbjct: 77 VYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPRRVAAM 136
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVI 141
+ +LG EVGY+I + + + T G+LL E M D L+ +Y I
Sbjct: 137 SVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLS--RYSCI 194
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRD 190
ILDE HER++ +D DL++++MSAT D K++ YF D
Sbjct: 195 ILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFD 243
Score = 173 (66.0 bits), Expect = 3.8e-30, Sum P(3) = 3.8e-30
Identities = 49/156 (31%), Positives = 80/156 (51%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+++TNIAE+S+TI + YV+D S Q ++ +++S + +S++ A+QR GR G
Sbjct: 352 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAG 411
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T+ F L + P I E K + ++ +D
Sbjct: 412 RTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVL-----ELKKLGIDDLVHFDYMD 466
Query: 447 PPYPEVVGDALDLLDHKRALQK---ISPRGRYEPTF 479
PP PE + AL+ L++ L ++P GR F
Sbjct: 467 PPAPETMMRALEELNYLNCLDDNGDLTPLGRKASEF 502
Score = 42 (19.8 bits), Expect = 3.8e-30, Sum P(3) = 3.8e-30
Identities = 9/45 (20%), Positives = 18/45 (40%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYY 647
+WC H+L +L + + + + R + + T YY
Sbjct: 579 DWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYY 623
Score = 37 (18.1 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 693 PNQFQSNNVAEKLASIIKEIRVQY 716
PN F N A KLA E+R Q+
Sbjct: 534 PNVFVRPNSARKLAD---EMRQQF 554
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 256 (95.2 bits), Expect = 4.2e-30, Sum P(3) = 4.2e-30
Identities = 63/168 (37%), Positives = 94/168 (55%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-AENMEP---ILCTQPRRFXXXX 83
V +E ++ + EN+V ++VGETG GK++Q+PQF++ A + P + TQPRR
Sbjct: 79 VWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAAIS 138
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
+ ELG EVGY I + S R+ + + T G+LL E M D LN KY VII
Sbjct: 139 VAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLN--KYDVII 196
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRD 190
LDE HER++ +D DL++++MSAT + K++ YF +
Sbjct: 197 LDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFEN 244
Score = 170 (64.9 bits), Expect = 4.2e-30, Sum P(3) = 4.2e-30
Identities = 62/208 (29%), Positives = 98/208 (47%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQ-----QWHLMKPLSSFFKVHILHSSVDTEQALM 319
V+ IH NE + ILVFL +E Q + K L+SS+ Q
Sbjct: 277 VIDIHTNEGTGD--ILVFLTGEEEIEDTCAKIQRETRERGLPPMKTLPLYSSLPIYQQSK 334
Query: 320 AMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQA 379
CK RK I++TNIAE+S+TI + +V+D S Q ++ +++S + +S++ A
Sbjct: 335 IFDTCKE-RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASA 393
Query: 380 EQRRGRTGRTCDGQVYRLVTKSFFGTLEDHEC-PAIXXXXXXXXXXXICCAESKAISDPK 438
QR GR GRT G+ +RL T+ F L + P I + + D
Sbjct: 394 NQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLL---KLGVVD-- 448
Query: 439 VLLQKALDPPYPEVVGDALDLLDHKRAL 466
++ +DPP P+ + AL++L + AL
Sbjct: 449 LVHFDFMDPPVPDTLIRALEVLHYLGAL 476
Score = 40 (19.1 bits), Expect = 4.2e-30, Sum P(3) = 4.2e-30
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 904 SYSENLESQKTLMQNFFEHLAIRMLADAL 932
S+ +N E NF H AI+ AD++
Sbjct: 560 SFKKNGEDPTWCYDNFLNHRAIKQ-ADSV 587
Score = 37 (18.1 bits), Expect = 8.6e-30, Sum P(3) = 8.6e-30
Identities = 10/46 (21%), Positives = 19/46 (41%)
Query: 604 WCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLPTYYD 648
WC ++L ++ + + + RF+ P G N YY+
Sbjct: 570 WCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVSGDVNS-KFYYE 614
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 249 (92.7 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 56/164 (34%), Positives = 86/164 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
V RE++++ V E +V +IVGETG GK++Q+PQ+L I CTQPRR
Sbjct: 469 VYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAAMSV 528
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
C+LG EVGY I S+++ + + T G+L+ E + Y V+I+D
Sbjct: 529 AARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAP-DLASYSVLIID 587
Query: 145 EVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
E HER++ +D DL++++ SAT D ++ DYF
Sbjct: 588 EAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYF 631
Score = 177 (67.4 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 68/219 (31%), Positives = 110/219 (50%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKP----LSSFFKVHIL---HSSVDTE-Q 316
VL IH E ILVFL ++Q +++ L + K I+ +S++ T+ Q
Sbjct: 666 VLQIHITEP--LGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQ 723
Query: 317 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
A + + RKV+LATNIAE+S+TI + YVID Q ++ ++S + VS+
Sbjct: 724 AKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSR 783
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 435
+ A QR+GR GR G+ +RL T +F LE++ P I + +S I+
Sbjct: 784 ASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNV---VLLLKSMGIN 840
Query: 436 DPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGR 474
D ++ +DPP + + AL+ L AL ++ RG+
Sbjct: 841 D--LMNFDFMDPPPAQTLIAALEQL---YALGALNDRGQ 874
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 235 (87.8 bits), Expect = 5.1e-30, Sum P(3) = 5.1e-30
Identities = 61/168 (36%), Positives = 87/168 (51%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE---NMEP--ILCTQPRRFXXX 82
V +E+IV+ + EN+V LIVGETG GK++Q+PQFLL + N P I CTQPRR
Sbjct: 194 VFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAI 253
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR--DRGLNALKYKV 140
R +G +GY I +S ++ + F T GVLL + D L+ + +
Sbjct: 254 AVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTH-- 311
Query: 141 IILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+I+DEVHER SD L+++L SA D+ + YF
Sbjct: 312 VIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 359
Score = 204 (76.9 bits), Expect = 5.1e-30, Sum P(3) = 5.1e-30
Identities = 76/264 (28%), Positives = 128/264 (48%)
Query: 215 VSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH------KLIHDLVLHI 268
V LE + L + G E SSL SG S + E+ H K+ DL++H+
Sbjct: 555 VDLLESYSASL--EFGNLDE-SSLVQTSGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 611
Query: 269 HKN--ESDIEKSILVFLPTYYALEQ-QWHLMKPLSSF------FKVHILHSSVDTEQALM 319
N S +IL+FLP Y + + ++ F ++V +LHS++ T
Sbjct: 612 LYNICHSCEAGAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKK 671
Query: 320 AMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 378
+K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++VW+S++
Sbjct: 672 VLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 731
Query: 379 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXX--XXXICCAESKAISD 436
A QR+GR GR G +RL ++ F + + + P + + + AI+D
Sbjct: 732 AIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCAIAD 791
Query: 437 PKVLLQKALDPPYPEVVGDALDLL 460
L KA +PP +V +A+ +L
Sbjct: 792 ---FLMKAPEPPPALIVRNAVQML 812
Score = 40 (19.1 bits), Expect = 5.1e-30, Sum P(3) = 5.1e-30
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 581 LQQVLKFDETKVTASLLPKIEEEWCSL 607
L + L F ASLL ++ ++W SL
Sbjct: 1106 LDEWLSFKLEPEAASLLLQLRQKWHSL 1132
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 228 (85.3 bits), Expect = 6.8e-30, Sum P(3) = 6.8e-30
Identities = 54/170 (31%), Positives = 87/170 (51%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
V + ++ +++ E+ +I+ ETG GK++Q+PQ+L + I TQPRR
Sbjct: 75 VFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNGIIAITQPRRVAAVSI 134
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
ELG +VGY + +E++K+ + T G+L+ E M D L+ KY VIIL
Sbjct: 135 SKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLS--KYSVIIL 192
Query: 144 DEVHERSVESDXXXXXXXXXXXXX---NDLRVVLMSATADITKYRDYFRD 190
DE HER++ +D N L++++MSAT D + YF +
Sbjct: 193 DEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNN 242
Score = 188 (71.2 bits), Expect = 6.8e-30, Sum P(3) = 6.8e-30
Identities = 58/167 (34%), Positives = 86/167 (51%)
Query: 256 EVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMK------PLSSF-FKVHIL 308
++H + H I+K E + ILVFL +E L+ P+ S V +
Sbjct: 277 QIH-IAHLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPI 335
Query: 309 HSSVDTEQALMAM-KICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKID 367
S++ EQ + K K RKVILATNIAE+S+TI + YV+DS ++ ID
Sbjct: 336 FSALPQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGID 395
Query: 368 SAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 414
S ++ +S++ A+QR GR GR +G+ YRL T+ F L+ P I
Sbjct: 396 SLNIIPISKASAKQRTGRAGREFEGKCYRLYTQETFEKLDTSSIPEI 442
Score = 50 (22.7 bits), Expect = 6.8e-30, Sum P(3) = 6.8e-30
Identities = 11/48 (22%), Positives = 26/48 (54%)
Query: 579 DHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDIL 626
DH+ + F E + + P+ +++WC H++ S+ V ++E ++
Sbjct: 563 DHITFLNVFREFQKSK---PQQQQQWCFDHFINLKSMIKVLNVFEQLV 607
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 241 (89.9 bits), Expect = 7.4e-30, Sum P(3) = 7.4e-30
Identities = 66/198 (33%), Positives = 97/198 (48%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-----AENMEPILCTQPRRFXXX 82
V LR I+ V + +IVGETGCGKS+Q+PQ+L AE + TQPRR
Sbjct: 56 VFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEG-RVVGVTQPRRVAAV 114
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLS-ERSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
R LG EVGY I + ++I F T G+L+ EM L +Y V+
Sbjct: 115 SVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPL-LTRYSVL 173
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLA 201
+LDE HER++ +D DLR+++ SAT D K+RD+F G+ + +
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTS 233
Query: 202 IPSTNQRTIFQRRVSYLE 219
+ T + F + Y++
Sbjct: 234 VILTVEGRTFPVDIFYIQ 251
Score = 180 (68.4 bits), Expect = 7.4e-30, Sum P(3) = 7.4e-30
Identities = 64/227 (28%), Positives = 112/227 (49%)
Query: 240 YCSGPSPSMANAEIKP--EVHKLIHDL-VLHIHKNESDIEKSILVFLPTYYALEQQWHLM 296
Y P P + ++ ++H++ +D +L + ++E + + + AL + +
Sbjct: 249 YIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTG-MR 307
Query: 297 KPLSSFFKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 355
K L +V +++ + + +Q + ++ +S RKVI+ATN+AE+S+TI +AYVID C
Sbjct: 308 KHL----RVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVID-CGF 362
Query: 356 LQV-FWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHE-CPA 413
+++ ++ I+ +V VS++ A QR GR GR G+ YRL T T ED E P
Sbjct: 363 VKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYT----ATEEDFEKLPQ 418
Query: 414 IXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ KA+ VL L PP + + AL+LL
Sbjct: 419 STVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELL 465
Score = 43 (20.2 bits), Expect = 7.4e-30, Sum P(3) = 7.4e-30
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 644
+WC H+L L S + E + + F+ PK +S G P
Sbjct: 565 QWCQEHFLNYKGLVRASVVREQLKKLLVCFKVPK--KSSEGDP 605
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 257 (95.5 bits), Expect = 8.6e-30, Sum P(3) = 8.6e-30
Identities = 84/294 (28%), Positives = 143/294 (48%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL----AENMEPILCTQPRRFXXXX 83
+ R +++ V +N++T+++G TGCGK++Q+PQFL A I CTQPRR
Sbjct: 27 ITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVAKS 86
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
N G GY I ++SE++KI + T G+LL+E+ L +Y ++IL
Sbjct: 87 VSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLE-RYSIVIL 145
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIP 203
DEVHER++ +D ND R+VL SA+ D K +F G+ ++V ++I
Sbjct: 146 DEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFF---GQ-DKVCTMSI- 200
Query: 204 STNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH---KL 260
+ +F +L++ TE VD + + ++ + P + + E+ K
Sbjct: 201 ---EGKLFPVETLFLQKPTENY-VDSAIETVIN-INSTYPPGDILVFLSGRKEIEYCIKK 255
Query: 261 IHDLVLHIHKNESDIEKSILVFLPTYYAL--EQQWHLMKPLSSFFKVHILHSSV 312
I D + IH +E D + LV LP + L ++Q + F+ I +++
Sbjct: 256 IEDSL--IHASE-DCQT--LVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNI 304
Score = 158 (60.7 bits), Expect = 8.6e-30, Sum P(3) = 8.6e-30
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 308 LHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 366
LH+ + ++ + I RKVI +TNIAE+S+TI + YV+DS + Q ++ +
Sbjct: 275 LHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRT 334
Query: 367 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLED 408
V +S+S A QR GR GRT G+V+RL T+ + +++
Sbjct: 335 SKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKE 376
Score = 45 (20.9 bits), Expect = 8.6e-30, Sum P(3) = 8.6e-30
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 599 KIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKF-LGTSNGLPT 645
K + +WC +YL +L DI + RF KF + T+ LP+
Sbjct: 520 KKDLQWCRKNYLNYQTLRQAL----DIRTHLVRFLNKFSIPTAQRLPS 563
Score = 38 (18.4 bits), Expect = 4.6e-29, Sum P(3) = 4.6e-29
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 589 ETKVTASLLPKIEEEWCSLHY 609
ET++ + KIE W +Y
Sbjct: 623 ETQIFVKNISKIESFWLDKYY 643
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 228 (85.3 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 57/165 (34%), Positives = 89/165 (53%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-P------ILCTQPRRFXXXXX 84
RE I++ + +++V ++ G TGCGK++Q+PQF+L +++ P I+CTQPRR
Sbjct: 543 RENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISV 602
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
R +G VGY I S +++++ T GVLL + D L + + II+
Sbjct: 603 AERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGVTH--IIV 660
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DEVHER+ ESD L+V+LMSAT + + +YF
Sbjct: 661 DEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYF 705
Score = 197 (74.4 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 56/183 (30%), Positives = 93/183 (50%)
Query: 278 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 329
+ILVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 844 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGVTK 903
Query: 330 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 389
+I++TNIAE+S+TI V YVIDS + + +D ++ ++S E +VSQ+ A QR+GR GR
Sbjct: 904 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 963
Query: 390 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 448
G + L T F L + P I I E + + + + + ++PP
Sbjct: 964 ASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFARLIEPP 1023
Query: 449 YPE 451
+ +
Sbjct: 1024 HAD 1026
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 232 (86.7 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 66/198 (33%), Positives = 92/198 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-----AENMEPILCTQPRRFXXX 82
V LR I+ + + +IVGETGCGKS+Q+PQ+L AE + TQPRR
Sbjct: 56 VFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEG-RVVGVTQPRRVAAV 114
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
R LG EVGY I ++I F T G+L+ EM L KY I
Sbjct: 115 TVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL-LTKYSAI 173
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLA 201
+LDE HER++ +D DLR+++ SAT D K+RD+F +
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTSDPPRDTC 233
Query: 202 IPSTNQRTIFQRRVSYLE 219
+ T + F + YL+
Sbjct: 234 VILTVEGRTFPVDIFYLQ 251
Score = 186 (70.5 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 65/217 (29%), Positives = 108/217 (49%)
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLS-SFFKVHI-- 307
P+ K + V+ IH+ E D + IL FL +E ++ + L + K H+
Sbjct: 255 PDYIKSTVETVMKIHQTEGDGD--ILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRV 312
Query: 308 --LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 363
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 371
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 423
I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 372 TAIECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAFDQLPQSTVPEMQRSNLAPVI 431
Query: 424 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 463
Score = 45 (20.9 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 644
+WC H+L L + + E + + +F+ PK +S G P
Sbjct: 563 QWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPK--KSSEGDP 603
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 233 (87.1 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 65/198 (32%), Positives = 93/198 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-----AENMEPILCTQPRRFXXX 82
V LR I+ + + +I+GETGCGKS+Q+PQ+L AE + TQPRR
Sbjct: 56 VFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEG-RVVGVTQPRRVAAV 114
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
R LG EVGY I + ++I F T G+L+ EM L KY I
Sbjct: 115 TVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPL-LTKYSAI 173
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLA 201
+LDE HER++ +D DLR+++ SAT D K+RD+F +
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNHNDTSDPTRDTC 233
Query: 202 IPSTNQRTIFQRRVSYLE 219
+ T + F + YL+
Sbjct: 234 VILTVEGRTFPVDIFYLQ 251
Score = 184 (69.8 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 65/217 (29%), Positives = 107/217 (49%)
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLSSF-FKVHI-- 307
P+ K + V+ IH+ E D + IL FL +E ++ + L K H+
Sbjct: 255 PDYIKSTVETVMKIHQTEGDGD--ILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRI 312
Query: 308 --LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 363
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 371
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 423
I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 372 TAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVI 431
Query: 424 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 463
Score = 45 (20.9 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 644
+WC H+L L + + E + + +F+ PK +S G P
Sbjct: 563 QWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPK--KSSEGDP 603
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 221 (82.9 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 71/232 (30%), Positives = 117/232 (50%)
Query: 258 HKLIHDLVLHIHKNESDIEKSILVFLP----TYYALEQ---QWHLMKPLSSFFKVHILHS 310
++L+ +L+ HI +++ E +IL+FLP Y L+ + P + + LHS
Sbjct: 899 YELLEELICHI--DDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLP--LHS 954
Query: 311 SV-DTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSA 369
S+ +EQ + ++ K RKVI ATNIAE+S+TI V YVIDS + + ++ +K+ S
Sbjct: 955 SIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSM 1014
Query: 370 ELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTL-EDHECPAIXXXXXXXXXXXICC 428
W+SQ+ A QR GR GR G + L T+ F L ++ P + C
Sbjct: 1015 VEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVEL-----C 1069
Query: 429 AESK--AISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ---KISPRGRY 475
+ K + K L +AL+PP + A+ LL A++ +++P G +
Sbjct: 1070 LQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHH 1121
Score = 204 (76.9 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 58/180 (32%), Positives = 90/180 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
+ ++ I++ + E V ++ GETG GK++QVPQF+L + ++ I+CTQPRR
Sbjct: 616 ISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIA 675
Query: 81 XXXXXXXXXXGRNCELG-----GEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLN 134
R CE VGY + S++++++F T G+LL ++ DR LN
Sbjct: 676 AISVAQRVADER-CESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLN 734
Query: 135 ALKYKVIILDEVHERSVESDXXXXXXXXXXX------XXNDLRVVLMSATADITKYRDYF 188
+ + II+DEVHERS+ D L+V+LMSAT D + YF
Sbjct: 735 DVTH--IIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYF 792
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 256 (95.2 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 59/167 (35%), Positives = 90/167 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM--EPIL-CTQPRRFXXXXX 84
V + RE++++ V EN++ ++VGETG GK++Q+ Q+L E ++ CTQPRR
Sbjct: 544 VFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFANEGVIGCTQPRRVAAMSV 603
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
CELG EVGY I S ++I + T G+L E+ D L +Y VI+L
Sbjct: 604 AKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDLK--RYSVIML 661
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRD 190
DE HER++ +D DL++++ SAT D K+ YF +
Sbjct: 662 DEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAYFNE 708
Score = 165 (63.1 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 66/217 (30%), Positives = 106/217 (48%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQQWHL----MKPLS-SFFKVHIL--HSSVDTE-Q 316
V+ IH +E + IL+FL ++ + MK L S ++ IL +S++ E Q
Sbjct: 741 VMQIHIDEPPGD--ILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNEMQ 798
Query: 317 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
+ + RKV++ATNIAE+S+TI + YV+D Q +D +DS + +SQ
Sbjct: 799 SRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQ 858
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 436
+QA QR GR GRT G+ +RL T++ + T + +I I ++ I+D
Sbjct: 859 AQANQRAGRAGRTGPGKCFRLYTEAAYQT--EMLPTSIPEIQRQNLSNTILLLKAMGIND 916
Query: 437 PKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRG 473
+L +DPP P + L L+ AL + G
Sbjct: 917 --LLHFDFMDPP-P--INTMLTALEELYALSALDDEG 948
Score = 46 (21.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 95 ELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDRGLNALK 137
+L EVG+H G +S L R + + G+L D+ D L+A+K
Sbjct: 314 DLAPEVGFHSGANSMALGSRHNL---SNGLLEDKAPD--LSAIK 352
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 235 (87.8 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 62/169 (36%), Positives = 89/169 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE---NMEP--ILCTQPRRFXXX 82
V +E+IV+ + EN+V LIVGETG GK++Q+PQFLL + N P I CTQPRR
Sbjct: 194 VFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAI 253
Query: 83 XXXXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMR--DRGLNALKYK 139
R +G +GY I S+ +S ++ + F T GVLL + D L+ + +
Sbjct: 254 AVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTH- 312
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+I+DEVHER SD L+++L SA D+ + YF
Sbjct: 313 -VIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 360
Score = 197 (74.4 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 74/266 (27%), Positives = 128/266 (48%)
Query: 215 VSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH------KLIHDLVLHI 268
V LE + L + G E SSL + +G S + E+ H K+ DL++H+
Sbjct: 556 VDLLESYSASL--EFGNLDE-SSLVHTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 612
Query: 269 HKNESD-IEK-SILVFLPTYYALEQ-QWHLMKPLSSF------FKVHILHSSVDTEQALM 319
N K +IL+FLP Y + + ++ F ++V +LHS++ T
Sbjct: 613 LYNICHGCHKCAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKK 672
Query: 320 AMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 378
+K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++VW+S++
Sbjct: 673 VLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 732
Query: 379 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPK 438
A QR+GR GR G +RL ++ F + + + P + C +K ++
Sbjct: 733 AVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQEL-----CLHTKLLAPVN 787
Query: 439 V----LLQKALDPPYPEVVGDALDLL 460
L KA +PP +V +A+ +L
Sbjct: 788 CPIADFLMKAPEPPPALIVRNAVQML 813
Score = 40 (19.1 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 581 LQQVLKFDETKVTASLLPKIEEEWCSL 607
L + L F ASLL ++ ++W SL
Sbjct: 1053 LDEWLNFKLDPEAASLLLQLRQKWHSL 1079
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 239 (89.2 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 64/162 (39%), Positives = 87/162 (53%)
Query: 38 KVLENRVTLI-VGETGCGKSSQVPQFLL----AENMEP-----ILCTQPRRFXXXXXXXX 87
K L N TLI VGETG GK++Q+PQF++ AE + + CTQPRR
Sbjct: 72 KTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLVGCTQPRRVAAMSVSRR 131
Query: 88 XXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIILDEV 146
+ +G EVGY I S R+ + + T G+LL E M D L +YKVIILDE
Sbjct: 132 VAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLE--RYKVIILDEA 189
Query: 147 HERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
HER++ +D DL++V+MSAT + K++DYF
Sbjct: 190 HERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYF 231
Score = 176 (67.0 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 47/140 (33%), Positives = 77/140 (55%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RK++++TNIAE+S+TI + YVID + Q ++ +++S + +S++ A QR GR G
Sbjct: 342 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAG 401
Query: 388 RTCDGQVYRLVT-KSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T KSF L+ P I + + I D ++ +D
Sbjct: 402 RTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTL---KKLGIDD--LVHFDFMD 456
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL++L++ AL
Sbjct: 457 PPAPETLMRALEVLNYLGAL 476
Score = 45 (20.9 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 8/47 (17%), Positives = 19/47 (40%)
Query: 601 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYY 647
+ WC +++ ++ + + ++ + RF K T YY
Sbjct: 567 DPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYY 613
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 233 (87.1 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 53/164 (32%), Positives = 89/164 (54%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL--LAENMEP-ILCTQPRRFXXXXX 84
+ + + +++ +NRV ++VGETG GKS+Q+PQFL E + TQPRR
Sbjct: 98 IWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAAVNL 157
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
+ C LG +VGY I S++++I + T G+LL E+ + + + +Y +ILD
Sbjct: 158 AKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILS-QYHTLILD 216
Query: 145 EVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
E HER++ +D LRV++MSAT + ++ ++F
Sbjct: 217 EAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFF 260
Score = 181 (68.8 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 67/212 (31%), Positives = 95/212 (44%)
Query: 279 ILVFLPTYYALEQQWHLMKPLSSFFKVHI-------LHSSVDTEQALMA-MKICKSHRKV 330
ILVFL +E L+K S ++ L +S+ EQ L + +HRKV
Sbjct: 307 ILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKV 366
Query: 331 ILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI--DSAELVWVSQSQAEQRRGRTGR 388
+L+TNIAE+SVTI + YVID+ L N K+ +S + +SQS A QR GR GR
Sbjct: 367 VLSTNIAETSVTISGIRYVIDT--GLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGR 424
Query: 389 TCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 448
GQ YR+ T++ F L P I + KA V+ +DPP
Sbjct: 425 EAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTL-----KARGQNDVINFHYMDPP 479
Query: 449 YPEVVGDALDLLDHKRALQKISPRGRYEPTFY 480
E + L L+H ++ + G Y
Sbjct: 480 SKEGL---LRALEHLYSIGALDDNGHINDLGY 508
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 252 (93.8 bits), Expect = 3.5e-29, Sum P(3) = 3.5e-29
Identities = 72/244 (29%), Positives = 121/244 (49%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE-----NMEPILCTQPRRFXXXXXXX 86
R++ ++ + ++ + VGETG GK++Q+PQ++L + N + + CTQPRR
Sbjct: 113 RQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVACTQPRRVAAMSVAQ 172
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIILDE 145
+ ELG EVGY I + + + + T G LL E + D N +Y II+DE
Sbjct: 173 RVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIHDP--NMTRYSCIIIDE 230
Query: 146 VHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIPS- 204
HER++ +D +DL++++MSAT D K++ YF + +LA+P
Sbjct: 231 AHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYFFE------APILAVPGR 284
Query: 205 TNQRTIF---QRRVSYLE-QVTELLGVDHGMTSELSSLRYCSGPSP-SMANAEIKPEVHK 259
T+ IF + Y+E V +L + H +E L + +G +++ EV +
Sbjct: 285 THPVEIFYTAEAERDYIEASVRTVLQI-HATEAEGDILLFLTGEEEIEDVCRKVRLEVDE 343
Query: 260 LIHD 263
LI D
Sbjct: 344 LIRD 347
Score = 168 (64.2 bits), Expect = 3.5e-29, Sum P(3) = 3.5e-29
Identities = 46/140 (32%), Positives = 74/140 (52%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RK I+ATNIAE+S+TI + YV+D S Q ++ +++S + +S++ A+QR GR G
Sbjct: 386 RKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAG 445
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T++ F L + P I E K + ++ +D
Sbjct: 446 RTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTIL-----ELKKLGVDDLVHFDFMD 500
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL+ L++ L
Sbjct: 501 PPAPETMMRALEELNYLSCL 520
Score = 39 (18.8 bits), Expect = 3.5e-29, Sum P(3) = 3.5e-29
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 903 ESYSENLESQKTLMQNFFEHLAIRMLADALYDT 935
++Y N+ ++ L+ FF +A+R + +Y T
Sbjct: 658 KNYYTNI--RRCLVAGFFMQVALRETSGKVYHT 688
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 235 (87.8 bits), Expect = 3.6e-29, Sum P(3) = 3.6e-29
Identities = 61/168 (36%), Positives = 87/168 (51%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE---NMEP--ILCTQPRRFXXX 82
V +E+IV+ + EN+V LIVGETG GK++Q+PQFLL + N P I CTQPRR
Sbjct: 210 VFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAI 269
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR--DRGLNALKYKV 140
R +G +GY I +S ++ + F T GVLL + D L+ + +
Sbjct: 270 AVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTH-- 327
Query: 141 IILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+I+DEVHER SD L+++L SA D+ + YF
Sbjct: 328 VIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 375
Score = 196 (74.1 bits), Expect = 3.6e-29, Sum P(3) = 3.6e-29
Identities = 74/264 (28%), Positives = 127/264 (48%)
Query: 215 VSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH------KLIHDLVLHI 268
V LE + L + G E SSL +G S + E+ H K+ DL++H+
Sbjct: 571 VDLLESYSASL--EFGNLDE-SSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 627
Query: 269 HKN--ESDIEKSILVFLPTYYALEQ-QWHLMKPLSSF------FKVHILHSSVDTEQALM 319
N S +IL+FLP Y + + ++ F ++V +LHS++ T
Sbjct: 628 LYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKK 687
Query: 320 AMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 378
+K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++VW+S++
Sbjct: 688 VLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 747
Query: 379 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXX--XXXICCAESKAISD 436
A QR+GR GR G +RL ++ F + + + P + + + I+D
Sbjct: 748 AIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIAD 807
Query: 437 PKVLLQKALDPPYPEVVGDALDLL 460
L KA +PP +V +A+ +L
Sbjct: 808 ---FLMKAPEPPPALIVRNAVQML 828
Score = 40 (19.1 bits), Expect = 3.6e-29, Sum P(3) = 3.6e-29
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 581 LQQVLKFDETKVTASLLPKIEEEWCSL 607
L + L F ASLL ++ ++W SL
Sbjct: 1122 LDEWLNFKLEPEAASLLLQLRQKWHSL 1148
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 238 (88.8 bits), Expect = 3.9e-29, Sum P(3) = 3.9e-29
Identities = 59/167 (35%), Positives = 90/167 (53%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLL----AENMEP-----ILCTQPRRFXXX 82
++ + + N+ ++VGETG GK++Q+PQF+L A+N + + CTQPRR
Sbjct: 71 KDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAM 130
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVI 141
+ +G EVGY I S R+ + + T G+LL E M D L +YKVI
Sbjct: 131 SVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLE--RYKVI 188
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
ILDE HER++ +D DL++V+MSAT + K+++YF
Sbjct: 189 ILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYF 235
Score = 176 (67.0 bits), Expect = 3.9e-29, Sum P(3) = 3.9e-29
Identities = 47/140 (33%), Positives = 77/140 (55%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RK++++TNIAE+S+TI + YVID + Q ++ +++S + +S++ A QR GR G
Sbjct: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAG 405
Query: 388 RTCDGQVYRLVT-KSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T KSF L+ P I + + I D ++ +D
Sbjct: 406 RTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTL---KKLGIDD--LVHFDFMD 460
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL++L++ AL
Sbjct: 461 PPAPETLMRALEVLNYLGAL 480
Score = 44 (20.5 bits), Expect = 3.9e-29, Sum P(3) = 3.9e-29
Identities = 8/47 (17%), Positives = 19/47 (40%)
Query: 601 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYY 647
+ WC +++ ++ + + ++ + RF K T YY
Sbjct: 571 DPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYY 617
Score = 37 (18.1 bits), Expect = 2.1e-28, Sum P(3) = 2.1e-28
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 904 SYSENLESQKTLMQNFFEHLAIRMLADALYDTRV-IITMNNIK 945
+Y +N E +NF + A++ AD + V I++ N+K
Sbjct: 564 AYKQNNEDPNWCFENFVNNRAMKS-ADNVRQQLVRIMSRFNLK 605
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 236 (88.1 bits), Expect = 4.1e-29, Sum P(3) = 4.1e-29
Identities = 54/164 (32%), Positives = 88/164 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAEN---MEPILCTQPRRFXXXXX 84
+ + R++++ V +++V +IVGETG GK++Q+PQ+L + + CTQPRR
Sbjct: 406 IYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSV 465
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
+LG EVGY I SE++ + + T G+LL E+ + Y VII+D
Sbjct: 466 AARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEP-DLGSYSVIIVD 524
Query: 145 EVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
E HER++ +D DL++++ SAT D K+ D+F
Sbjct: 525 EAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFF 568
Score = 191 (72.3 bits), Expect = 4.1e-29, Sum P(3) = 4.1e-29
Identities = 66/214 (30%), Positives = 109/214 (50%)
Query: 265 VLHIHKNESDIEKSILVFLP---TYYALEQQW-HLMKPLSSFFKVHIL---HSSVDTE-Q 316
VL IH E +LVFLP A+E+ H ++ L + + I+ ++++ +E Q
Sbjct: 603 VLTIHVKEP--LGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQ 660
Query: 317 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
A + + RKV+LATNIAE+S+TI + YV+D S ++ ++S + +S+
Sbjct: 661 AKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISK 720
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 435
+ A QR GR GRT G+ YRL T +++ LED+ P I + K++
Sbjct: 721 ASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSL-----KSLG 775
Query: 436 DPKVLLQKALDPPYPEVVGDALDLLDHKRALQKI 469
+L +DPP E + +L+LL AL ++
Sbjct: 776 IHNLLNFDFMDPPPSEALIKSLELLFALGALNQL 809
Score = 38 (18.4 bits), Expect = 4.1e-29, Sum P(3) = 4.1e-29
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 594 ASLLPKIEEEWCSLHYLVQSSLHHVSELYE 623
AS L ++ W H LV +S ++ ++ E
Sbjct: 979 ASGLSQVLPRWVVYHQLVLTSKEYMRQVTE 1008
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 232 (86.7 bits), Expect = 4.3e-29, Sum P(3) = 4.3e-29
Identities = 67/198 (33%), Positives = 92/198 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-----AENMEPILCTQPRRFXXX 82
V LR I+ V + +IVGETGCGKS+Q+PQ+L AE + TQPRR
Sbjct: 48 VFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEG-RVVGVTQPRRVAAV 106
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
R LG EVGY I ++I F T G+L+ EM L KY I
Sbjct: 107 TVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL-LTKYSAI 165
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLA 201
+LDE HER++ +D DLR+++ SAT D K+RD+F +
Sbjct: 166 MLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTC 225
Query: 202 IPSTNQRTIFQRRVSYLE 219
+ T + F + YL+
Sbjct: 226 VILTVEGRTFPVDIFYLQ 243
Score = 180 (68.4 bits), Expect = 4.3e-29, Sum P(3) = 4.3e-29
Identities = 64/217 (29%), Positives = 107/217 (49%)
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLS-SFFKVHI-- 307
P+ K + V+ IH+ E D + IL FL +E ++ + L + K H+
Sbjct: 247 PDYIKSTVETVMKIHQTEGDGD--ILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRV 304
Query: 308 --LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 363
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 305 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 363
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 423
I+ + VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 364 TTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVI 423
Query: 424 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ KA+ VL + PP + + AL+LL
Sbjct: 424 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 455
Score = 45 (20.9 bits), Expect = 4.3e-29, Sum P(3) = 4.3e-29
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 644
+WC H+L L + + E + + +F+ PK +S G P
Sbjct: 555 QWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPK--KSSEGDP 595
Score = 39 (18.8 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 689 PFVAPNQFQSNNV--AEKLASIIKEIRVQYVEDVSGNQ 724
P A +S N ++++ SI +++Q + V GNQ
Sbjct: 482 PMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQ 519
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 235 (87.8 bits), Expect = 4.4e-29, Sum P(3) = 4.4e-29
Identities = 61/168 (36%), Positives = 87/168 (51%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE---NMEP--ILCTQPRRFXXX 82
V +E+IV+ + EN+V LIVGETG GK++Q+PQFLL + N P I CTQPRR
Sbjct: 195 VFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAI 254
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR--DRGLNALKYKV 140
R +G +GY I +S ++ + F T GVLL + D L+ + +
Sbjct: 255 AVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTH-- 312
Query: 141 IILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+I+DEVHER SD L+++L SA D+ + YF
Sbjct: 313 VIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 360
Score = 196 (74.1 bits), Expect = 4.4e-29, Sum P(3) = 4.4e-29
Identities = 73/266 (27%), Positives = 127/266 (47%)
Query: 215 VSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH------KLIHDLVLHI 268
V LE + L + G E SSL +G S + E+ H K+ DL++H+
Sbjct: 556 VDLLESYSATL--EFGNLDE-SSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 612
Query: 269 HKN--ESDIEKSILVFLPTYYALEQ-QWHLMKPLSSF------FKVHILHSSVDTEQALM 319
N S ++L+FLP Y + + ++ F ++V +LHS++ T
Sbjct: 613 LYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKK 672
Query: 320 AMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 378
+K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++VW+S++
Sbjct: 673 VLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 732
Query: 379 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPK 438
A QR+GR GR G +RL ++ F + + + P + C +K ++
Sbjct: 733 AIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQEL-----CLHTKLLAPVN 787
Query: 439 V----LLQKALDPPYPEVVGDALDLL 460
L KA +PP +V +A+ +L
Sbjct: 788 CPIADFLMKAPEPPPALIVRNAVQML 813
Score = 39 (18.8 bits), Expect = 4.4e-29, Sum P(3) = 4.4e-29
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 581 LQQVLKFDETKVTASLLPKIEEEWCSL 607
L + L F ASLL ++ ++W SL
Sbjct: 1107 LDEWLHFTLEPEAASLLLQLRQKWHSL 1133
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 232 (86.7 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 67/198 (33%), Positives = 92/198 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-----AENMEPILCTQPRRFXXX 82
V LR I+ V + +IVGETGCGKS+Q+PQ+L AE + TQPRR
Sbjct: 56 VFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEG-RVVGVTQPRRVAAV 114
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
R LG EVGY I ++I F T G+L+ EM L KY I
Sbjct: 115 TVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL-LTKYSAI 173
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLA 201
+LDE HER++ +D DLR+++ SAT D K+RD+F +
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTC 233
Query: 202 IPSTNQRTIFQRRVSYLE 219
+ T + F + YL+
Sbjct: 234 VILTVEGRTFPVDIFYLQ 251
Score = 180 (68.4 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 64/217 (29%), Positives = 107/217 (49%)
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLS-SFFKVHI-- 307
P+ K + V+ IH+ E D + IL FL +E ++ + L + K H+
Sbjct: 255 PDYIKSTVETVMKIHQTEGDGD--ILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRV 312
Query: 308 --LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 363
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 371
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 423
I+ + VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 372 TTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVI 431
Query: 424 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 463
Score = 45 (20.9 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 644
+WC H+L L + + E + + +F+ PK +S G P
Sbjct: 563 QWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPK--KSSEGDP 603
Score = 39 (18.8 bits), Expect = 1.9e-28, Sum P(3) = 1.9e-28
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 689 PFVAPNQFQSNNV--AEKLASIIKEIRVQYVEDVSGNQ 724
P A +S N ++++ SI +++Q + V GNQ
Sbjct: 490 PMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQ 527
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 229 (85.7 bits), Expect = 7.0e-29, Sum P(3) = 7.0e-29
Identities = 62/166 (37%), Positives = 83/166 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL----AENMEPILCTQPRRFXXXX 83
V R I+ V + +IVGETG GKS+Q+PQ+LL A + I TQPRR
Sbjct: 46 VFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGVTQPRRVAATS 105
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERS-KIVFKTAGVLLDEMRDRGLNALKYKVII 142
R LG EVGY I + +I F T G+L+ EM L KY V+I
Sbjct: 106 VATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPL-LKKYSVLI 164
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
LDE HER++ +D DLR+++ SAT D K++D+F
Sbjct: 165 LDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFF 210
Score = 179 (68.1 bits), Expect = 7.0e-29, Sum P(3) = 7.0e-29
Identities = 64/217 (29%), Positives = 108/217 (49%)
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLSSF-FKVHI-- 307
P+ K + VL IH+ E D + +L FL +E+ L+ + LS + K H+
Sbjct: 245 PDYVKATVETVLKIHETEDDGD--VLAFLTGQEEVEKVVSLLQEQARTLSRYGMKKHLCV 302
Query: 308 --LHSSVD-TEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 363
+++ + EQ + ++ + RKV++ATNIAE+S+TI V +VID C +++ ++
Sbjct: 303 LPMYAGLPYNEQMRVFERMAPTVRKVVVATNIAETSITINGVVFVID-CAFVKIRAYNPR 361
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 423
I+S + +S++ A QR GR GR G+ +RL T+ F L + P +
Sbjct: 362 TAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEKLPESTVPEMQRSNLAPVI 421
Query: 424 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ KA+ VL L PP + + AL+LL
Sbjct: 422 LQL-----KALGIDNVLRFSFLSPPPAQSMVQALELL 453
Score = 47 (21.6 bits), Expect = 7.0e-29, Sum P(3) = 7.0e-29
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 644
+WC H+L L + + E + + +++F+ P+ +S G P
Sbjct: 553 QWCQDHFLNYKGLLRATAVREQLRHLLNKFKVPRT--SSEGDP 593
Score = 42 (19.8 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 22/95 (23%), Positives = 39/95 (41%)
Query: 757 SHSLQAKRPACKFFYSLQGCRNGDSCIFSHDLGQPVLPSSSFTCLP-EDGV-ANAASLLR 814
S +L AK+ F + G + D+C G+ +T P D V A ++L+
Sbjct: 198 SATLDAKKFQDFFNLNESGDASKDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLK 257
Query: 815 LFPTSSDGSILLLDDTDMHFSANLACLYDPSRIIS 849
+ T DG +L ++ L + +R +S
Sbjct: 258 IHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLS 292
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 243 (90.6 bits), Expect = 7.6e-29, Sum P(3) = 7.6e-29
Identities = 59/166 (35%), Positives = 89/166 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFXXXX 83
V LR++ +E V +N++ +++GETG GK++Q+ Q+L E + + I CTQPRR
Sbjct: 512 VFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAAMS 571
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C +G EVGY I S ++I + T G+L E + D L+ KY VII
Sbjct: 572 VAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLS--KYSVII 629
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
LDE HER+V +D DL++++ SAT D ++ YF
Sbjct: 630 LDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYF 675
Score = 170 (64.9 bits), Expect = 7.6e-29, Sum P(3) = 7.6e-29
Identities = 71/221 (32%), Positives = 109/221 (49%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLS-SFFKVHIL--HSSVDTE-Q 316
V+ IH +E + ILVFL ++ ++ K L S ++ IL +S++ +E Q
Sbjct: 710 VMQIHLSEGPGD--ILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQ 767
Query: 317 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
+ + RKV++ATNIAE+S+TI + YV+D Q +D +DS + +SQ
Sbjct: 768 SRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQ 827
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 436
+QA QR GR GRT G+ YRL T+S + E P I I ++ I+D
Sbjct: 828 AQARQRSGRAGRTGPGKCYRLYTESAYRN-EMLPSP-IPEIQRQNLSHTILMLKAMGIND 885
Query: 437 PKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRGR 474
+L +DPP + + AL L AL ++P GR
Sbjct: 886 --LLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGR 924
Score = 51 (23.0 bits), Expect = 7.6e-29, Sum P(3) = 7.6e-29
Identities = 6/35 (17%), Positives = 17/35 (48%)
Query: 599 KIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFR 633
+ + WC HY+ + ++ + ++ + R+R
Sbjct: 1002 RCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYR 1036
Score = 44 (20.5 bits), Expect = 4.0e-28, Sum P(3) = 4.0e-28
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 552 GRKEMVIMGNLCAFQFWQHVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLV 611
GRK +I+ LC+ F +D + V + +L EW H L+
Sbjct: 1043 GRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWVIYHELI 1102
Query: 612 QSS---LHHVS 619
Q+S +H VS
Sbjct: 1103 QTSKEYMHTVS 1113
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 261 (96.9 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 64/166 (38%), Positives = 90/166 (54%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFXXXX 83
V R++++E V EN++ ++VG+TG GK++QV Q+L AE N I CTQPRR
Sbjct: 579 VYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYL-AEAGWANKGIIGCTQPRRVAAMS 637
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C+LG EVGY I S +KI + T G+L E + D L KY VI+
Sbjct: 638 VAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDLK--KYSVIM 695
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
LDE HER++ +D DLR+++ SAT D K+ +YF
Sbjct: 696 LDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYF 741
Score = 163 (62.4 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 47/134 (35%), Positives = 71/134 (52%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV++ATNIAE+S+TI + YVID Q +D +DS + +SQ+QA+QR GR G
Sbjct: 845 RKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAG 904
Query: 388 RTCDGQVYRLVTKSFFGTLEDHECPA-IXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T++ + + P I I ++ I+D +L +D
Sbjct: 905 RTGPGKCFRLYTEAAY---QSEMLPTTIPDIQRQNLSHTILMLKAMGIND--LLHFDFMD 959
Query: 447 PPYPEVVGDALDLL 460
PP + AL+ L
Sbjct: 960 PPPTNTMLTALEEL 973
Score = 40 (19.1 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 5/34 (14%), Positives = 16/34 (47%)
Query: 604 WCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFL 637
WC +++ + ++ + +L + R+ K +
Sbjct: 1073 WCYENFIQARQIRRAQDVRQQLLGIMQRYHHKIV 1106
Score = 40 (19.1 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 244 PSPSMANAEIKPEVHKLIHDLVL----HIHKNESDIEKSILVFLPTYYALEQQWHLMK 297
PS +M KP H + H LVL ++H K ++ PT++ + L K
Sbjct: 1149 PSSAMFG---KPAEHVIYHTLVLTTKEYMHCTTGIEPKWLVEAAPTFFKVAPTDRLSK 1203
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 227 (85.0 bits), Expect = 8.3e-29, Sum P(3) = 8.3e-29
Identities = 53/171 (30%), Positives = 92/171 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL----LAENMEPILCTQPRRFXXXX 83
V S RE+ ++ + EN+ ++VGETG GK++Q+PQ+L + N + I CTQPRR
Sbjct: 231 VYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQPRRVAATS 290
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIV-FKTAGVLLDE-MRDRGLNALKYKVI 141
+LG +VGY+I + + ++ + T G+LL E ++D L KY I
Sbjct: 291 VANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLG--KYSAI 348
Query: 142 ILDEVHERSVESDXXXXXXXXXXXXX--NDLRVVLMSATADITKYRDYFRD 190
++DE HER++ ++ +DL++++ SAT + K+ +F +
Sbjct: 349 MIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNN 399
Score = 185 (70.2 bits), Expect = 8.3e-29, Sum P(3) = 8.3e-29
Identities = 53/152 (34%), Positives = 84/152 (55%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RK++LATNIAE+S+TI ++YVID Q ++ ++S +V S++ A+QR GR G
Sbjct: 502 RKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAG 561
Query: 388 RTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
R G+ +RL TK SF+ L+ ++ P I + S I+D +L + +D
Sbjct: 562 RVGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLL---SLGIND--LLGFEFMD 616
Query: 447 PPYPEVVGDALDLLDHKRALQKISPRGRYEPT 478
PP E + AL+LL AL ++ +G+ T
Sbjct: 617 PPSKEAIIKALNLL---YALGALNTQGKLTKT 645
Score = 47 (21.6 bits), Expect = 8.3e-29, Sum P(3) = 8.3e-29
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 536 YTGCYFGGD--GNTRLLTGRKEMVIMGNLCAFQFWQHVFKDKQRL-DHLQQVLKFDETKV 592
+T C D NT+ + ++ M N + F++ KDK+ L D +Q +F++ +
Sbjct: 658 FTKCILTSDKFDNTKQIIS---IIAMLNESSNLFYRP--KDKKELADKRKQ--EFNDLQG 710
Query: 593 TASLLPKIEEEWCSLHYLVQ---------SSLHHVSELYEDIL 626
+L KI ++W Y VQ ++ + +YE ++
Sbjct: 711 DQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKRIKNIYEQLI 753
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 218 (81.8 bits), Expect = 9.4e-29, Sum P(2) = 9.4e-29
Identities = 66/204 (32%), Positives = 102/204 (50%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFL----LAENMEPILCTQPRRFXXXXXXXX 87
++ ++ V N VT++VG+TG GK++Q+PQFL + + I TQPRR
Sbjct: 27 KDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVTQPRRIAATTVALR 86
Query: 88 XXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIILDEV 146
E+G EVGY I SE ++I F T G+L+ E + D L+ +Y ++++DE
Sbjct: 87 VAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLLS--RYSIVMVDEA 144
Query: 147 HERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRD-LG--RGERVE----V 199
HERSV +D +LR+++ SAT ++ +F LG R +R E +
Sbjct: 145 HERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSSTLGGSRQDREEPQGTI 204
Query: 200 LAIPSTNQRTIFQRRVSYLEQVTE 223
I S RT + + YLE E
Sbjct: 205 GTIVSLEGRT-YPIDILYLESPAE 227
Score = 190 (71.9 bits), Expect = 9.4e-29, Sum P(2) = 9.4e-29
Identities = 66/205 (32%), Positives = 99/205 (48%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALE--------QQWHLMKPLSSFFKVHILHSSVDTEQ 316
VL +H+NE D + ILVFL +E + HL + L S + TEQ
Sbjct: 237 VLDVHENEPDGD--ILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLP-LFSGLSTEQ 293
Query: 317 ALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVS 375
+ + ++ RKVI +TNIAE+SVTI + YV+DS ++ I++ V +S
Sbjct: 294 QMYIFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPIS 353
Query: 376 QSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 435
++ A QR GR GRT G+ +RL T+ + +L D P + + KA+
Sbjct: 354 KAAAAQRAGRAGRTKPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQL-----KALG 408
Query: 436 DPKVLLQKALDPPYPEVVGDALDLL 460
VL L PP E++ AL+LL
Sbjct: 409 IDNVLHFDFLTPPPAELMTKALELL 433
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 238 (88.8 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 53/164 (32%), Positives = 88/164 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ + R+++++ V E++V +IVG+TG GK++Q+PQ+L + CTQPRR
Sbjct: 406 IYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSV 465
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
+LG EVGY I S+++ + + T G+LL E+ + Y V+I+D
Sbjct: 466 AARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEP-DLASYSVVIVD 524
Query: 145 EVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
E HER++ +D DL++++ SAT D K+ DYF
Sbjct: 525 EAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYF 568
Score = 174 (66.3 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 51/164 (31%), Positives = 87/164 (53%)
Query: 308 LHSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 366
+++++ +E QA + + RKV+LATNIAE+S+TI + YV+D S ++ +
Sbjct: 651 IYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGM 710
Query: 367 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXX 425
+S + +S++ A QR GR GRT G+ YRL T ++ LE++ P +
Sbjct: 711 ESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASV--- 767
Query: 426 ICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKI 469
+ +S I D ++ +DPP E + +L+LL AL K+
Sbjct: 768 VLALKSLGIHD--LINFDFMDPPPAEALVKSLELLFALGALNKL 809
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 254 (94.5 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 57/161 (35%), Positives = 88/161 (54%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXXXXXX 88
+ ++++ V N + +IVGETG GK++Q+ Q+L E I CTQPRR
Sbjct: 485 KHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQPRRVAAVSVAYRV 544
Query: 89 XXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIILDEVH 147
N ++G VGY I + ++ +KI + T G+LL E + D+ L+ KY VII+DE H
Sbjct: 545 SYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELD--KYSVIIMDEAH 602
Query: 148 ERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
ERS+ +D NDL++++ SAT D K+ +F
Sbjct: 603 ERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFF 643
Score = 157 (60.3 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 48/128 (37%), Positives = 75/128 (58%)
Query: 294 HLMKPLSSFFKVHILHSSVDTEQALMAMKICKSH--RKVILATNIAESSVTIPKVAYVID 351
H++ P F + ++S + +EQ KI K + RK+I++TNIAE+S+T+ + YVID
Sbjct: 767 HMIYP----FYIFPIYSQLSSEQQ---SKIFKKYDLRKIIVSTNIAETSLTLDGIKYVID 819
Query: 352 S--CRSLQVFWDVNRKI--DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKS-FFGTL 406
+ C+ L+V+ N+ I D ++ +SQ+ A QR GR GRT G YRL T++ F L
Sbjct: 820 TGYCK-LKVY---NQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDL 875
Query: 407 EDHECPAI 414
+ P I
Sbjct: 876 YQNNIPEI 883
Score = 50 (22.7 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 7/38 (18%), Positives = 19/38 (50%)
Query: 604 WCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSN 641
WC+ +++ +L+ E+Y +++ + K + N
Sbjct: 1024 WCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDN 1061
Score = 39 (18.8 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 234 ELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNES 273
EL CSG + A + E L ++ H+H N S
Sbjct: 1064 ELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSS 1103
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 254 (94.5 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 57/161 (35%), Positives = 88/161 (54%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXXXXXX 88
+ ++++ V N + +IVGETG GK++Q+ Q+L E I CTQPRR
Sbjct: 485 KHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQPRRVAAVSVAYRV 544
Query: 89 XXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIILDEVH 147
N ++G VGY I + ++ +KI + T G+LL E + D+ L+ KY VII+DE H
Sbjct: 545 SYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELD--KYSVIIMDEAH 602
Query: 148 ERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
ERS+ +D NDL++++ SAT D K+ +F
Sbjct: 603 ERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFF 643
Score = 157 (60.3 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 48/128 (37%), Positives = 75/128 (58%)
Query: 294 HLMKPLSSFFKVHILHSSVDTEQALMAMKICKSH--RKVILATNIAESSVTIPKVAYVID 351
H++ P F + ++S + +EQ KI K + RK+I++TNIAE+S+T+ + YVID
Sbjct: 767 HMIYP----FYIFPIYSQLSSEQQ---SKIFKKYDLRKIIVSTNIAETSLTLDGIKYVID 819
Query: 352 S--CRSLQVFWDVNRKI--DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKS-FFGTL 406
+ C+ L+V+ N+ I D ++ +SQ+ A QR GR GRT G YRL T++ F L
Sbjct: 820 TGYCK-LKVY---NQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDL 875
Query: 407 EDHECPAI 414
+ P I
Sbjct: 876 YQNNIPEI 883
Score = 50 (22.7 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 7/38 (18%), Positives = 19/38 (50%)
Query: 604 WCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSN 641
WC+ +++ +L+ E+Y +++ + K + N
Sbjct: 1024 WCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDN 1061
Score = 39 (18.8 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 234 ELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNES 273
EL CSG + A + E L ++ H+H N S
Sbjct: 1064 ELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSS 1103
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 238 (88.8 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 57/165 (34%), Positives = 86/165 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ L++++++ V +N+V +++GETG GK++QV Q+L I CTQPRR
Sbjct: 517 IYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSV 576
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
C LG EVGY I + I + T G+LL E+ D L+ +Y VI+L
Sbjct: 577 AKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS--QYSVIML 634
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HER++ +D DLR+++ SAT D K+ YF
Sbjct: 635 DEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYF 679
Score = 182 (69.1 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 65/212 (30%), Positives = 103/212 (48%)
Query: 265 VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHIL---HSSVDTE-Q 316
VL IH E E ILVFL A + + MK L I+ +S++ +E Q
Sbjct: 714 VLQIHLTEP--EGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQ 771
Query: 317 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
+ + RKV++ATNIAE+S+TI + YV+D + Q ++ + ++S + +SQ
Sbjct: 772 SRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQ 831
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 436
+ A+QR GR GRT G+ YRL T+S + +E P + KA+
Sbjct: 832 ASAKQRAGRAGRTGPGKCYRLYTESAYR----NEMPPTSIPEIQRINLGMTTLTMKAMGI 887
Query: 437 PKVLLQKALDPPYPEVVGDALDLLDHKRALQK 468
+L +DPP P+ + A++ L AL +
Sbjct: 888 NDLLSFDFMDPPQPQALISAMEQLYSLGALDE 919
Score = 41 (19.5 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 5/30 (16%), Positives = 17/30 (56%)
Query: 604 WCSLHYLVQSSLHHVSELYEDILNAVHRFR 633
WC +++ SL ++ + +L+ + +++
Sbjct: 1011 WCFENFIQSRSLRRAQDVRKQLLSIMDKYK 1040
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 231 (86.4 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 73/231 (31%), Positives = 118/231 (51%)
Query: 258 HKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH--------ILH 309
+ L+ +L+ HI +++ E +ILVFLP + L+ L++ ++ LH
Sbjct: 866 YDLLEELICHI--DDTCEEGAILVFLPGMSEINM---LLNRLAASYRFRGASGDWLLPLH 920
Query: 310 SSV-DTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDS 368
SS+ TEQ + ++ K RKVI+ATNIAE+S+TI V YVIDS + + ++ ++K+ S
Sbjct: 921 SSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSS 980
Query: 369 AELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTL-EDHECPAIXXXXXXXXXXXIC 427
WVS++ A QR GR GR G + L T+ F L ++ P + I
Sbjct: 981 MVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHI- 1039
Query: 428 CAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ---KISPRGRY 475
+ + K L KAL+PP + A+ LL AL+ +++P G +
Sbjct: 1040 --KLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHH 1088
Score = 192 (72.6 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 56/180 (31%), Positives = 92/180 (51%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
+ +++ I++K+ E V ++ GETG GK++QVPQF+L + ++ I+CTQPR
Sbjct: 599 ISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRAIT 658
Query: 81 XXXXXXXXXXGRNCEL--GGE---VGYHIGHSKHLSERSKIVFKTAGVLLDEM-RDRGLN 134
CE G + V Y + H S++++++F T G+LL ++ D L
Sbjct: 659 VAQRVAD----ERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTTLK 714
Query: 135 ALKYKVIILDEVHERSVESDXXXXXXXXXXXXXN------DLRVVLMSATADITKYRDYF 188
+ + II+DEVHERS+ D + L+V+LMSAT D ++ YF
Sbjct: 715 DVTH--IIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYF 772
Score = 41 (19.5 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 573 KDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHH-VSELYEDILNAVHR 631
KD+Q +D ++ L D+ + +++L + S H L+ + V L+E A
Sbjct: 1132 KDEQNVDRVKLALLSDKLESSSNLNNNDRQ---SDHLLMVVAYEKWVRILHEQGFKAAES 1188
Query: 632 F-RPKFLGTS 640
F KFL +S
Sbjct: 1189 FCESKFLNSS 1198
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 211 (79.3 bits), Expect = 2.8e-28, Sum P(3) = 2.8e-28
Identities = 55/171 (32%), Positives = 89/171 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ R++I+ + +++V ++VGETG GKS+QVPQ+L I T+PRR
Sbjct: 49 IRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITEPRRVSTVTL 108
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
R +G VGY + + +S +KI F T G+LL E+ L +Y VII+D
Sbjct: 109 ANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPL-LTQYGVIIVD 167
Query: 145 EVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGE 195
E HER++ +D + L++++ SAT D + + ++F G GE
Sbjct: 168 EAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGE 218
Score = 198 (74.8 bits), Expect = 2.8e-28, Sum P(3) = 2.8e-28
Identities = 65/181 (35%), Positives = 90/181 (49%)
Query: 304 KVHILHSSVD-TEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 362
KV ++ S+ T+Q + K RKV+LATNIAE+S+TIP + YVID C ++V W
Sbjct: 294 KVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVID-CGYVKVKW-Y 351
Query: 363 NRKI--DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXX 420
N K DS +V VS++ A QR GR GR G+VYRL TKS + L + P +
Sbjct: 352 NPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELS 411
Query: 421 XXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRY-EPTF 479
+ KA+ +L D P P + L L+ AL I +G +P
Sbjct: 412 GAILQL-----KALGIGNIL---RFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVG 463
Query: 480 Y 480
Y
Sbjct: 464 Y 464
Score = 41 (19.5 bits), Expect = 2.8e-28, Sum P(3) = 2.8e-28
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 602 EEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYDPYEFEHTC 656
+E+C ++L+ +L L E ++ R K+ G+P + + E C
Sbjct: 547 KEFCGQYFLIYRNLKRAHSLREQLITVA---RKKY-----GIPIFSCKGDVEKLC 593
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 217 (81.4 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 73/226 (32%), Positives = 109/226 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPL---SSFFKVHILHSSVDT- 314
LI DLVL I + IL FLP + ++ Q L++ L +S + V +HS++
Sbjct: 697 LITDLVLQIDAHGEP--GGILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMM 754
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 755 DQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWV 814
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S+S QRRGR GR G Y L +S + ++ P I I E
Sbjct: 815 SKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKT 874
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL------DHKRALQKISPR 472
A+ L KALD P + V +A+ LL D + AL + R
Sbjct: 875 AVE----FLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKR 916
Score = 204 (76.9 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 59/204 (28%), Positives = 98/204 (48%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAEN-MEP------ILCTQPRRFXXXXX 84
++ I+ + +N V +I G+TGCGK++++PQ LL +E ++ TQPRR
Sbjct: 484 KDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRRISAISV 543
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
+ VGY + SK + ++F T G+LL +++ L + + ++
Sbjct: 544 AQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGVSH--VV 601
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAI 202
+DEVHER V +D DLR+VLMSAT D ++ YF D V+ +
Sbjct: 602 VDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDC------PVVKV 655
Query: 203 PSTNQRTIFQRRVSYLEQVTELLG 226
P ++ + YLE++ LG
Sbjct: 656 PGF----MYPVKEYYLEEILAKLG 675
Score = 39 (18.8 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 823 SILLLDDTDMH 833
++LL+ DTD+H
Sbjct: 1141 AVLLMTDTDIH 1151
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 235 (87.8 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 57/165 (34%), Positives = 88/165 (53%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME--P-----ILCTQPRRFXXXXX 84
RE I++ + ++V ++ G TGCGK++Q+PQF+L +++ P I+CTQPRR
Sbjct: 543 RETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVANIICTQPRRISAISV 602
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
R +G VGY I S +++++ T GVLL + D L + + +I+
Sbjct: 603 AERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGITH--VIV 660
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DEVHER+ ESD DLR++LMSAT + + YF
Sbjct: 661 DEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYF 705
Score = 176 (67.0 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 59/208 (28%), Positives = 101/208 (48%)
Query: 278 SILVFLPTYYALEQQWHLMKPLSSFFKVHI-------LHSSVDTE-QALMAMKICKSHRK 329
++L+FLP ++ + ++ + F H LHSS+ +E Q + ++ K
Sbjct: 842 AVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIK 901
Query: 330 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 389
+I++TNIAE+SVTI V YVIDS + + +D ++ ++S E +VS++ A QR+GR GR
Sbjct: 902 IIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGRV 961
Query: 390 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 448
G + L + + L + P I I E + +L + ++PP
Sbjct: 962 ASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPP 1021
Query: 449 YPEVV-GDALDLLD--HKRALQKISPRG 473
E + L L D A +K++P G
Sbjct: 1022 RTESLRASKLRLQDLGALTADEKLTPLG 1049
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 227 (85.0 bits), Expect = 4.0e-28, Sum P(3) = 4.0e-28
Identities = 59/165 (35%), Positives = 86/165 (52%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-------AENMEPILCTQPRRFXXXXX 84
RE I++ + +++V +I G TGCGK++Q+PQF+L E + I+CTQPRR
Sbjct: 501 RETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISV 560
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
R +G VGY I S +++++ T GVLL + D L + + II+
Sbjct: 561 AERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGVTH--IIV 618
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DEVHER+ ESD L+V+LMSAT D + YF
Sbjct: 619 DEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYF 663
Score = 194 (73.4 bits), Expect = 4.0e-28, Sum P(3) = 4.0e-28
Identities = 61/208 (29%), Positives = 103/208 (49%)
Query: 278 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 329
+ILVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 801 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTK 860
Query: 330 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 389
+I++TNIAE+S+TI V YVIDS + + +D + ++S E +VSQ+ A QR+GR GR
Sbjct: 861 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRV 920
Query: 390 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 448
G + L T + L + P I I E + + + + + ++PP
Sbjct: 921 ASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPP 980
Query: 449 YPEVVGDALDLLDHKRAL---QKISPRG 473
+ + + + L AL +K++P G
Sbjct: 981 HVDSLRASKVRLRDLGALTPDEKLTPLG 1008
Score = 39 (18.8 bits), Expect = 4.0e-28, Sum P(3) = 4.0e-28
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 562 LCAFQFWQHVFKDKQRLDH 580
LCA++ WQ K+ R +
Sbjct: 1077 LCAYKGWQLSTKESARASY 1095
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 227 (85.0 bits), Expect = 4.6e-28, Sum P(3) = 4.6e-28
Identities = 59/165 (35%), Positives = 86/165 (52%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-------AENMEPILCTQPRRFXXXXX 84
RE I++ + +++V +I G TGCGK++Q+PQF+L E + I+CTQPRR
Sbjct: 554 RETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISV 613
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
R +G VGY I S +++++ T GVLL + D L + + II+
Sbjct: 614 AERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGVTH--IIV 671
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DEVHER+ ESD L+V+LMSAT D + YF
Sbjct: 672 DEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYF 716
Score = 194 (73.4 bits), Expect = 4.6e-28, Sum P(3) = 4.6e-28
Identities = 61/208 (29%), Positives = 103/208 (49%)
Query: 278 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 329
+ILVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 854 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTK 913
Query: 330 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 389
+I++TNIAE+S+TI V YVIDS + + +D + ++S E +VSQ+ A QR+GR GR
Sbjct: 914 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRV 973
Query: 390 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 448
G + L T + L + P I I E + + + + + ++PP
Sbjct: 974 ASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPP 1033
Query: 449 YPEVVGDALDLLDHKRAL---QKISPRG 473
+ + + + L AL +K++P G
Sbjct: 1034 HVDSLRASKVRLRDLGALTPDEKLTPLG 1061
Score = 39 (18.8 bits), Expect = 4.6e-28, Sum P(3) = 4.6e-28
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 562 LCAFQFWQHVFKDKQRLDH 580
LCA++ WQ K+ R +
Sbjct: 1130 LCAYKGWQLSTKESARASY 1148
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 229 (85.7 bits), Expect = 4.9e-28, Sum P(3) = 4.9e-28
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 46 LIVGETGCGKSSQVPQ----FLLAENMEPILCTQPRRFXXXXXXXXXXXGRNCELGGEVG 101
++VGETG GK++Q+PQ F +++ + + CTQPRR + +LG EVG
Sbjct: 92 VLVGETGSGKTTQIPQWCVDFAVSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVG 151
Query: 102 YHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIILDEVHERSVESDXXXXXX 160
Y I + ++ + + T G+LL E M D L+ +Y+VI+LDE HER++ +D
Sbjct: 152 YSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLD--QYQVILLDEAHERTLATDILMGVL 209
Query: 161 XXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRR 214
+DL++V+MSAT D K++ YF + GR VE+ P +R +
Sbjct: 210 KEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEP-ERDYLEAA 268
Query: 215 VSYLEQV 221
+ + Q+
Sbjct: 269 IRTVIQI 275
Score = 181 (68.8 bits), Expect = 4.9e-28, Sum P(3) = 4.9e-28
Identities = 48/140 (34%), Positives = 80/140 (57%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 348 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAG 407
Query: 388 RTCDGQVYRLVT-KSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T K+F ++D+ P I + + I D ++ +D
Sbjct: 408 RTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQL---KKLGIDD--LVHFDFMD 462
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL+LL++ AL
Sbjct: 463 PPAPETLMRALELLNYLAAL 482
Score = 38 (18.4 bits), Expect = 4.9e-28, Sum P(3) = 4.9e-28
Identities = 9/47 (19%), Positives = 18/47 (38%)
Query: 601 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYY 647
+ WC +++ SL + + + + RF + T YY
Sbjct: 573 DPNWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYY 619
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 351 (128.6 bits), Expect = 4.9e-28, P = 4.9e-28
Identities = 127/444 (28%), Positives = 202/444 (45%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 468 RDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRRISAVSV 527
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
L VG+ + SK + ++F T G+LL +++ + +I+
Sbjct: 528 AQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNP-SLEGVSHVIV 586
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIP 203
DEVHER V +D LR+VLMSAT D ++ YF G G V+ +P
Sbjct: 587 DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF---G-G--CPVIKVP 640
Query: 204 STNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHD 263
++ + YLE + LG H R+ P + E ++ L+ D
Sbjct: 641 GF----MYPVKEHYLEDILAKLG-KHQYPHRH---RHHEWPR---SEDECALDLD-LVTD 688
Query: 264 LVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT-EQAL 318
LVLHI IL FLP + ++ Q L + L S + + +HS++ +Q
Sbjct: 689 LVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKA 746
Query: 319 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 378
+ + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWVS++
Sbjct: 747 IFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRAN 806
Query: 379 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESKAISD 436
QRRGR GR G Y L +S + + P I I E A+
Sbjct: 807 VIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVE- 865
Query: 437 PKVLLQKALDPPYPEVVGDALDLL 460
L KA+D P + V +A+ LL
Sbjct: 866 ---FLSKAVDSPNIKAVDEAVILL 886
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 245 (91.3 bits), Expect = 5.2e-28, Sum P(3) = 5.2e-28
Identities = 64/187 (34%), Positives = 96/187 (51%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPI-----L--CTQPRRFX 80
V ++R +++E + +N+ +IVGETG GK++Q+ Q++ E M + L CTQPRR
Sbjct: 338 VYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLIGCTQPRRVA 397
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYK 139
C+LG VGY I SE + I + T G+L E + D +N +Y
Sbjct: 398 AESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALNDPNMN--RYS 455
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
VI+LDE HER++ +D +L+V++ SAT D K+ YF + GR
Sbjct: 456 VIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCPIITIPGR 515
Query: 194 GERVEVL 200
VEVL
Sbjct: 516 TFPVEVL 522
Score = 161 (61.7 bits), Expect = 5.2e-28, Sum P(3) = 5.2e-28
Identities = 57/159 (35%), Positives = 81/159 (50%)
Query: 255 PEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYYALE---QQWH-LMKPLSSFFKVHIL 308
PE+ L L V+ IH +E ILVFL +E + H MK L I+
Sbjct: 527 PEMDYLAAALESVIQIHVSEP--AGDILVFLTGQEEIETSCEALHERMKLLGENIPELII 584
Query: 309 ---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNR 364
+S++ +E Q + RKVILATNIAE+S+TI + YV+D +D
Sbjct: 585 LPVYSALPSEMQTRIFEPTPPGSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKL 644
Query: 365 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF 403
+DS + +S++QA QR GR GRT G+ YRL T+ +
Sbjct: 645 GMDSLRVTPISKAQANQRSGRAGRTGPGKCYRLYTEQAY 683
Score = 47 (21.6 bits), Expect = 5.2e-28, Sum P(3) = 5.2e-28
Identities = 8/38 (21%), Positives = 19/38 (50%)
Query: 604 WCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSN 641
WC +++ + S+ E+ + + + + RF K + N
Sbjct: 836 WCRDNFIQERSMRRAMEVRKQLKSIMQRFGYKTMSCGN 873
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 218 (81.8 bits), Expect = 5.3e-28, Sum P(3) = 5.3e-28
Identities = 55/165 (33%), Positives = 84/165 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ S R I++ + N++ ++VGETG GKS+Q+ Q+L I+CTQPRR
Sbjct: 440 IYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPRRIACIAI 499
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
N ++G EVGY I SE +KI++ T G+ L + + L + V+I+
Sbjct: 500 ANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDIS--VLII 557
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HER++ +D ++RVV+ SAT D K YF
Sbjct: 558 DEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYF 602
Score = 193 (73.0 bits), Expect = 5.3e-28, Sum P(3) = 5.3e-28
Identities = 51/136 (37%), Positives = 71/136 (52%)
Query: 325 KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRG 384
K RK+IL+TNI E+S+TI + YVIDS Q ++ N I+S + S++ QR G
Sbjct: 800 KIRRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTG 859
Query: 385 RTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKA 444
R GR DG+ +RL TK F L D+ P I I +S + D ++
Sbjct: 860 RAGRKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSM---ILLLKSLGMDD--IINFDF 914
Query: 445 LDPPYPEVVGDALDLL 460
LDPP P V+ L+LL
Sbjct: 915 LDPPSPIVIIKGLELL 930
Score = 46 (21.3 bits), Expect = 5.3e-28, Sum P(3) = 5.3e-28
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 264 LVLHIHKNESDIEKSILVFLPTYYALE 290
L +HI + + DI LVFLP Y +E
Sbjct: 638 LQIHITQGKGDI----LVFLPGQYEIE 660
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 218 (81.8 bits), Expect = 5.3e-28, Sum P(3) = 5.3e-28
Identities = 55/165 (33%), Positives = 84/165 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ S R I++ + N++ ++VGETG GKS+Q+ Q+L I+CTQPRR
Sbjct: 440 IYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPRRIACIAI 499
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
N ++G EVGY I SE +KI++ T G+ L + + L + V+I+
Sbjct: 500 ANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDIS--VLII 557
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HER++ +D ++RVV+ SAT D K YF
Sbjct: 558 DEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYF 602
Score = 193 (73.0 bits), Expect = 5.3e-28, Sum P(3) = 5.3e-28
Identities = 51/136 (37%), Positives = 71/136 (52%)
Query: 325 KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRG 384
K RK+IL+TNI E+S+TI + YVIDS Q ++ N I+S + S++ QR G
Sbjct: 800 KIRRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTG 859
Query: 385 RTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKA 444
R GR DG+ +RL TK F L D+ P I I +S + D ++
Sbjct: 860 RAGRKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSM---ILLLKSLGMDD--IINFDF 914
Query: 445 LDPPYPEVVGDALDLL 460
LDPP P V+ L+LL
Sbjct: 915 LDPPSPIVIIKGLELL 930
Score = 46 (21.3 bits), Expect = 5.3e-28, Sum P(3) = 5.3e-28
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 264 LVLHIHKNESDIEKSILVFLPTYYALE 290
L +HI + + DI LVFLP Y +E
Sbjct: 638 LQIHITQGKGDI----LVFLPGQYEIE 660
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 222 (83.2 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 65/208 (31%), Positives = 104/208 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME--P-----ILCTQPRRFX 80
V +++ + ++ ++ ++VGETG GK++Q+PQ+ + E M P + CTQPRR
Sbjct: 139 VWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCV-EYMRSLPGPKRGVACTQPRRVA 197
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYK 139
+ LG EVGY I S ++ + + T G+LL E M D L +Y
Sbjct: 198 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLE--RYG 255
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
VIILDE HER++ +D +DL+V++MSAT D K++ YF + GR
Sbjct: 256 VIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQV 221
VE+ P +R + + + Q+
Sbjct: 316 THPVEIFYTPEP-ERDYLEAAIRTVIQI 342
Score = 181 (68.8 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 529
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL+LL++ AL
Sbjct: 530 PPAPETLMRALELLNYLAAL 549
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 222 (83.2 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 65/208 (31%), Positives = 104/208 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME--P-----ILCTQPRRFX 80
V +++ + ++ ++ ++VGETG GK++Q+PQ+ + E M P + CTQPRR
Sbjct: 139 VWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCV-EYMRSLPGPKRGVACTQPRRVA 197
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYK 139
+ LG EVGY I S ++ + + T G+LL E M D L +Y
Sbjct: 198 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLE--RYG 255
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
VIILDE HER++ +D +DL+V++MSAT D K++ YF + GR
Sbjct: 256 VIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQV 221
VE+ P +R + + + Q+
Sbjct: 316 THPVEIFYTPEP-ERDYLEAAIRTVIQI 342
Score = 181 (68.8 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 529
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL+LL++ AL
Sbjct: 530 PPAPETLMRALELLNYLAAL 549
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 222 (83.2 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 65/208 (31%), Positives = 104/208 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME--P-----ILCTQPRRFX 80
V +++ + ++ ++ ++VGETG GK++Q+PQ+ + E M P + CTQPRR
Sbjct: 139 VWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCV-EYMRSLPGPKRGVACTQPRRVA 197
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYK 139
+ LG EVGY I S ++ + + T G+LL E M D L +Y
Sbjct: 198 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLE--RYG 255
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
VIILDE HER++ +D +DL+V++MSAT D K++ YF + GR
Sbjct: 256 VIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQV 221
VE+ P +R + + + Q+
Sbjct: 316 THPVEIFYTPEP-ERDYLEAAIRTVIQI 342
Score = 181 (68.8 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 529
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL+LL++ AL
Sbjct: 530 PPAPETLMRALELLNYLAAL 549
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 222 (83.2 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 65/208 (31%), Positives = 104/208 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME--P-----ILCTQPRRFX 80
V +++ + ++ ++ ++VGETG GK++Q+PQ+ + E M P + CTQPRR
Sbjct: 139 VWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCV-EYMRSLPGPKRGVACTQPRRVA 197
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYK 139
+ LG EVGY I S ++ + + T G+LL E M D L +Y
Sbjct: 198 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLE--RYG 255
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
VIILDE HER++ +D +DL+V++MSAT D K++ YF + GR
Sbjct: 256 VIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQV 221
VE+ P +R + + + Q+
Sbjct: 316 THPVEIFYTPEP-ERDYLEAAIRTVIQI 342
Score = 181 (68.8 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 529
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL+LL++ AL
Sbjct: 530 PPAPETLMRALELLNYLAAL 549
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 222 (83.2 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 65/208 (31%), Positives = 104/208 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME--P-----ILCTQPRRFX 80
V +++ + ++ ++ ++VGETG GK++Q+PQ+ + E M P + CTQPRR
Sbjct: 139 VWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCV-EYMRSLPGPKRGVACTQPRRVA 197
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYK 139
+ LG EVGY I S ++ + + T G+LL E M D L +Y
Sbjct: 198 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLE--RYG 255
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
VIILDE HER++ +D +DL+V++MSAT D K++ YF + GR
Sbjct: 256 VIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQV 221
VE+ P +R + + + Q+
Sbjct: 316 THPVEIFYTPEP-ERDYLEAAIRTVIQI 342
Score = 181 (68.8 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 529
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL+LL++ AL
Sbjct: 530 PPAPETLMRALELLNYLAAL 549
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 222 (83.2 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 65/208 (31%), Positives = 104/208 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME--P-----ILCTQPRRFX 80
V +++ + ++ ++ ++VGETG GK++Q+PQ+ + E M P + CTQPRR
Sbjct: 139 VWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCV-EYMRSLPGPKRGVACTQPRRVA 197
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYK 139
+ LG EVGY I S ++ + + T G+LL E M D L +Y
Sbjct: 198 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLE--RYG 255
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
VIILDE HER++ +D +DL+V++MSAT D K++ YF + GR
Sbjct: 256 VIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQV 221
VE+ P +R + + + Q+
Sbjct: 316 THPVEIFYTPEP-ERDYLEAAIRTVIQI 342
Score = 181 (68.8 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 529
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL+LL++ AL
Sbjct: 530 PPAPETLMRALELLNYLAAL 549
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 233 (87.1 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 68/175 (38%), Positives = 91/175 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL----AENMEPILCTQPRRFXXXX 83
V + R +I++++ N LI+ ETG GK++Q+PQFLL A+N I TQPRR
Sbjct: 70 VFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKN-GMIGITQPRRVAAIT 128
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
N +G VGY + S +KI F T GVLL E ++DR L LKY VII
Sbjct: 129 VARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLL--LKYSVII 186
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXN-----DLRVVLMSATADITKYRDYFRDLG 192
LDE HER+V +D +L+VV+ SAT DI + +YF G
Sbjct: 187 LDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFNCKG 241
Score = 168 (64.2 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 58/202 (28%), Positives = 93/202 (46%)
Query: 225 LGVDH-GMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVL---HIHKNESDIEKSIL 280
+ +DH G + Y G + + K E IH +++ HIH+ +L
Sbjct: 228 MDIDHFGNYFNCKGM-YLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPK-NHDVL 285
Query: 281 VFLPTYYALEQQWHLMKPLSSF-------FKVHILHSSVDTEQALMAMKICKSH-RKVIL 332
+FL +E ++ L+ +V L++ + + L ++ RKVIL
Sbjct: 286 IFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVIL 345
Query: 333 ATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDG 392
ATNIAE+S+TIP + VID + ++ +D + V +S++QA QR GR GR DG
Sbjct: 346 ATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADG 405
Query: 393 QVYRLVTKSFFGTLEDHECPAI 414
YR TK+ + D P I
Sbjct: 406 TCYRAYTKAEMDSFADATQPEI 427
Score = 45 (20.9 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 906 SENLES-QKTLMQNFFEHLAIRMLADALYDT 935
S+++E +K ++ FFE++A+ + D Y T
Sbjct: 604 SDDIEMLKKCILNGFFENIAV-LQRDGFYIT 633
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 249 (92.7 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 59/165 (35%), Positives = 91/165 (55%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
V + R++++ + EN V +IVGETG GK++Q+ Q+L + I CTQPRR
Sbjct: 536 VFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAMSV 595
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
+ +LG +VGY I SER+ I + T G+LL E +RD L++ Y II+
Sbjct: 596 AKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDS--YSAIIM 653
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ +D +DL++++ SAT D +K+ +F
Sbjct: 654 DEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFF 698
Score = 169 (64.5 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 51/148 (34%), Positives = 84/148 (56%)
Query: 264 LVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKP-LSSF-----FKVHILHSSVDTE-Q 316
L +H+ NE D+ L+F+P +E +++ L+ + ++S + ++ Q
Sbjct: 734 LQVHLTPNEGDM----LIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYSQLPSDLQ 789
Query: 317 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELV 372
A + K RK ++ATNIAE+S+T+ + YVIDS C+ L+V+ N +I D+ ++
Sbjct: 790 AKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCK-LKVY---NPRIGMDALQIY 845
Query: 373 WVSQSQAEQRRGRTGRTCDGQVYRLVTK 400
+SQ+ A QR GR GRT GQ YRL T+
Sbjct: 846 PISQANANQRSGRAGRTGPGQAYRLYTQ 873
Score = 40 (19.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 285 TYYALEQQWHLMKPLSSFFKVHILH 309
TY + QQW S++ H +H
Sbjct: 1012 TYLNVYQQWRQNNYSSTWCNEHFIH 1036
Score = 38 (18.4 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 604 WCSLHYLVQSSLHHVSELYEDI 625
WC+ H++ ++ V E+ + +
Sbjct: 1029 WCNEHFIHIKAMRKVREVRQQL 1050
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 227 (85.0 bits), Expect = 5.8e-28, Sum P(3) = 5.8e-28
Identities = 59/165 (35%), Positives = 86/165 (52%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-------AENMEPILCTQPRRFXXXXX 84
RE I++ + +++V +I G TGCGK++Q+PQF+L E + I+CTQPRR
Sbjct: 551 RETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISV 610
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
R +G VGY I S +++++ T GVLL + D L + + II+
Sbjct: 611 AERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGVTH--IIV 668
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DEVHER+ ESD L+V+LMSAT D + YF
Sbjct: 669 DEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYF 713
Score = 193 (73.0 bits), Expect = 5.8e-28, Sum P(3) = 5.8e-28
Identities = 60/208 (28%), Positives = 103/208 (49%)
Query: 278 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 329
++LVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 851 AVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTK 910
Query: 330 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 389
+I++TNIAE+S+TI V YVIDS + + +D + ++S E +VSQ+ A QR+GR GR
Sbjct: 911 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRV 970
Query: 390 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 448
G + L T + L + P I I E + + + + + ++PP
Sbjct: 971 ASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPP 1030
Query: 449 YPEVVGDALDLLDHKRAL---QKISPRG 473
+ + + + L AL +K++P G
Sbjct: 1031 HIDSLRASKVRLRDLGALTPDEKLTPLG 1058
Score = 39 (18.8 bits), Expect = 5.8e-28, Sum P(3) = 5.8e-28
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 562 LCAFQFWQHVFKDKQRLDH 580
LCA++ WQ K+ R +
Sbjct: 1127 LCAYKGWQLSTKESARASY 1145
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 221 (82.9 bits), Expect = 6.0e-28, Sum P(2) = 6.0e-28
Identities = 64/207 (30%), Positives = 100/207 (48%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL------LAENMEPILCTQPRRFXX 81
V +E+ + ++ ++ ++VGETG GK++Q+PQ+ L + CTQPRR
Sbjct: 106 VWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAA 165
Query: 82 XXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKV 140
+ LG EVGY I S ++ + + T G+LL E M D L +Y V
Sbjct: 166 MSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLE--RYGV 223
Query: 141 IILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRG 194
IILDE HER++ +D DL+V++MSAT D K++ YF + GR
Sbjct: 224 IILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRT 283
Query: 195 ERVEVLAIPSTNQRTIFQRRVSYLEQV 221
VE+ P +R + + + Q+
Sbjct: 284 HPVEIFYTPEP-ERDYLEAAIRTVIQI 309
Score = 181 (68.8 bits), Expect = 6.0e-28, Sum P(2) = 6.0e-28
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 382 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 441
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 442 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 496
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL+LL++ AL
Sbjct: 497 PPAPETLMRALELLNYLAAL 516
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 242 (90.2 bits), Expect = 8.0e-28, Sum P(3) = 8.0e-28
Identities = 61/166 (36%), Positives = 88/166 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFXXXX 83
+ LRE ++ V E+++ +++GETG GK++Q+ Q+L AE I CTQPRR
Sbjct: 510 IFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYL-AEAGYGTRGKIGCTQPRRVAAMS 568
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C+LG EVGY I S + I F T G+LL E + D L+A Y VII
Sbjct: 569 VSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSA--YSVII 626
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
LDE HER++ +D +L+V++ SAT + K+ YF
Sbjct: 627 LDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYF 672
Score = 169 (64.5 bits), Expect = 8.0e-28, Sum P(3) = 8.0e-28
Identities = 68/224 (30%), Positives = 107/224 (47%)
Query: 255 PEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYYALEQQWHL----MKPLSSFFKVHIL 308
PE L L V+ IH +E + IL+FL ++ + MK L S I+
Sbjct: 695 PEADYLDASLITVMQIHLSEPPGD--ILLFLTGQEEIDAACQILYERMKSLGSNVPDLII 752
Query: 309 ---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNR 364
+S++ +E Q + RKV++ATNIAE+S+TI + YVID S Q ++
Sbjct: 753 LPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKN 812
Query: 365 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXX 424
+DS + +SQ+ A QR GR GRT G+ YRL T+S F + +I
Sbjct: 813 GMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKN--EMLASSIPEIQRTNLGN 870
Query: 425 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK 468
+ ++ I+D +L +DPP + + A++ L AL +
Sbjct: 871 TVLTMKAMGIND--LLNFDFMDPPPVQTLVSAMEQLYSLGALDE 912
Score = 43 (20.2 bits), Expect = 8.0e-28, Sum P(3) = 8.0e-28
Identities = 6/35 (17%), Positives = 17/35 (48%)
Query: 599 KIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFR 633
K WC +++ SL ++ + ++ + R++
Sbjct: 999 KFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYK 1033
Score = 39 (18.8 bits), Expect = 2.1e-27, Sum P(3) = 2.1e-27
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSN 641
+W H LV ++ ++ E+ + PKF TS+
Sbjct: 1090 DWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSD 1128
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 348 (127.6 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 126/445 (28%), Positives = 201/445 (45%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 466 RDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSV 525
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
L VG+ + SK + ++F T G+LL +++ L + + ++
Sbjct: 526 AQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSH--VV 583
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAI 202
+DE HER V +D LR+VLMSAT D ++ YF G G V+ +
Sbjct: 584 VDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF---G-G--CPVIKV 637
Query: 203 PSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIH 262
P ++ + YLE + LG H R+ S ++ L+
Sbjct: 638 PGF----MYPVKEHYLEDILAKLG-KHQYPH-----RHRHHESEDECALDLD-----LVT 682
Query: 263 DLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT-EQA 317
DLVLHI IL FLP + ++ Q L + L S + + +HS++ +Q
Sbjct: 683 DLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 740
Query: 318 LMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQS 377
+ + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWVS++
Sbjct: 741 AIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 800
Query: 378 QAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESKAIS 435
QRRGR GR G Y L +S + + P I I E A+
Sbjct: 801 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMPEKTAVE 860
Query: 436 DPKVLLQKALDPPYPEVVGDALDLL 460
L KA+D P + V +A+ LL
Sbjct: 861 ----FLSKAVDSPNIKAVDEAVILL 881
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 217 (81.4 bits), Expect = 1.0e-27, Sum P(3) = 1.0e-27
Identities = 73/226 (32%), Positives = 109/226 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPL---SSFFKVHILHSSVDT- 314
LI DLVL I + IL FLP + ++ Q L++ L +S + V +HS++
Sbjct: 697 LITDLVLQIDAHGEP--GGILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMM 754
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 755 DQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWV 814
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S+S QRRGR GR G Y L +S + ++ P I I E
Sbjct: 815 SKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKT 874
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL------DHKRALQKISPR 472
A+ L KALD P + V +A+ LL D + AL + R
Sbjct: 875 AVE----FLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKR 916
Score = 199 (75.1 bits), Expect = 1.0e-27, Sum P(3) = 1.0e-27
Identities = 51/166 (30%), Positives = 83/166 (50%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAEN-MEP------ILCTQPRRFXXXXX 84
++ I+ + +N V +I G+TGCGK++++PQ LL +E ++ TQPRR
Sbjct: 484 KDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRRISAISV 543
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
+ VGY + SK + ++F T G+LL +++ L + + ++
Sbjct: 544 AQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGVSH--VV 601
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+DEVHER V +D DLR+VLMSAT D ++ YF
Sbjct: 602 VDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYF 647
Score = 39 (18.8 bits), Expect = 1.0e-27, Sum P(3) = 1.0e-27
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 823 SILLLDDTDMH 833
++LL+ DTD+H
Sbjct: 1141 AVLLMTDTDIH 1151
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 204 (76.9 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 59/206 (28%), Positives = 106/206 (51%)
Query: 277 KSILVFLPTYYALEQ--QWHLMKPLSSF-FKVHILHSSVDTEQALMAMKICKSH-RKVIL 332
K+ILVFLP + + L +P + +H LHSS+ +++ A + RK+++
Sbjct: 920 KAILVFLPGMAEIRRLNDELLSEPTFQHGWIIHALHSSIASDEQEKAFVVPPDGMRKIVI 979
Query: 333 ATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDG 392
ATNIAE+ +TIP + VID+ + + +D R++ ++S++ A+QRRGR GR G
Sbjct: 980 ATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRVQRG 1039
Query: 393 QVYRLVTKSFFGTL-EDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPE 451
+ + TK L + + P + + + + +P +L +ALDPP +
Sbjct: 1040 ICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEV-EPTLL--EALDPPSSK 1096
Query: 452 VVGDALDLLDHKRAL---QKISPRGR 474
+ A+D L +AL + ++P G+
Sbjct: 1097 NIRRAIDALKEVKALTSTENLTPLGQ 1122
Score = 203 (76.5 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 65/209 (31%), Positives = 101/209 (48%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM---EP--ILCTQPRRFXXX 82
+ + + +I+ + +R +I ETG GKS+Q+P F+L M P I T+PRR
Sbjct: 647 IWTFKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEMLSGRPCKIYVTEPRRISAI 706
Query: 83 XXXXXXXX----GRNCELGGE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNA 135
+N ++G +G+ + +S +++VF T GV++ M +R +
Sbjct: 707 SLARRVSEELGESKN-DVGTSRSLIGFAVRLESKVSPATRLVFATTGVVV-RMLERPDDF 764
Query: 136 LKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGE 195
++LDEVHERS++SD DL+++LMSAT D ++ Y LG G
Sbjct: 765 QDITHVVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFSTY---LG-G- 819
Query: 196 RVEVLAIPSTNQRTIFQRRVSYLEQVTEL 224
V VL IP RT F +LE EL
Sbjct: 820 -VPVLNIPG---RT-FPVETKFLEDAIEL 843
Score = 42 (19.8 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 925 IRMLADALYDTRVIITMNNIKFAQLQVEKLARDSF 959
IR DAL + + + + N+ Q+ KL D F
Sbjct: 1098 IRRAIDALKEVKALTSTENLTPLGQQLAKLPLDVF 1132
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 227 (85.0 bits), Expect = 1.6e-27, Sum P(4) = 1.6e-27
Identities = 67/225 (29%), Positives = 105/225 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM---EPILCTQPRRFXXXXX 84
+ + R +I++K+ ++ +++GETG GKS+Q+ QFL + E I+CTQPR+
Sbjct: 308 IYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTL 367
Query: 85 XXXXXX-GRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C V S SK+V+ T LL M+DR L+ + +I
Sbjct: 368 ADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGIS--CVI 425
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLG------RGER 196
+DE HERS+ +D DLR+V+MSATAD + YF G R
Sbjct: 426 IDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFP 485
Query: 197 VEVLAIPS-TNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRY 240
VE++ PS T + ++ SY+ V ++ H E + L +
Sbjct: 486 VEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAF 530
Score = 202 (76.2 bits), Expect = 1.6e-27, Sum P(4) = 1.6e-27
Identities = 68/218 (31%), Positives = 102/218 (46%)
Query: 264 LVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKI 323
+ + IHK E E +IL FL T A E +W + ++ LH + E+ +
Sbjct: 514 MAVEIHKTEK--EGTILAFL-TSQA-EVEWACERFITPSAIALPLHGKLSFEEQFRVFQN 569
Query: 324 CKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRR 383
RKVI ATNIAE+S+TIP V YVIDS + ++ + ++ VSQS A QR
Sbjct: 570 HPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRA 629
Query: 384 GRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQK 443
GR GRT G+ YRL +K+ F ++ ++ P I + A+ +
Sbjct: 630 GRAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLG-----VALLRMLALGVNNIAEFN 684
Query: 444 ALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYG 481
+D P PE + A+ L A+ + G +E T G
Sbjct: 685 FVDAPVPEAIAMAVQNLVQLGAV--VEKNGVHELTQEG 720
Score = 40 (19.1 bits), Expect = 1.6e-27, Sum P(4) = 1.6e-27
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 867 RILWGLCHSLKTVISEAGDNPIPWKEVKC 895
R+ + +L+ + E +PW+++KC
Sbjct: 1307 RLHFEAAKALQELNGEVLPGCLPWQKIKC 1335
Score = 37 (18.1 bits), Expect = 1.6e-27, Sum P(4) = 1.6e-27
Identities = 20/80 (25%), Positives = 31/80 (38%)
Query: 651 EFEHTCLLNCDPPRDMDPLAADNEHLGPSFEAKKCVAVPFVAPNQF--QSN----NVAEK 704
+FE +L DPP D D L KK V +F +SN ++ +
Sbjct: 930 DFEALYML--DPPPPFDVSQMDERRL----RIKKVVGCSSTVLKRFCGKSNRSLLSIVSR 983
Query: 705 LASIIKEIRVQYVEDVSGNQ 724
S+ + R+ DV N+
Sbjct: 984 ARSLCSDERIGIQVDVDQNE 1003
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 217 (81.4 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 64/207 (30%), Positives = 103/207 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL--LAENME-P---ILCTQPRRFXX 81
V +E+ + + ++ ++VGETG GK++Q+PQ+ + ++ P + CTQPRR
Sbjct: 113 VWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVACTQPRRVAA 172
Query: 82 XXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKV 140
+ LG EVGY I S ++ + + T G+LL E M D L +Y V
Sbjct: 173 MSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLE--RYGV 230
Query: 141 IILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRG 194
IILDE HER++ +D +DL+V++MSAT D K++ YF + GR
Sbjct: 231 IILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRT 290
Query: 195 ERVEVLAIPSTNQRTIFQRRVSYLEQV 221
VE+ P +R + + + Q+
Sbjct: 291 HPVEIFYTPEP-ERDYLEAAIRTVIQI 316
Score = 181 (68.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 389 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 448
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 449 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 503
Query: 447 PPYPEVVGDALDLLDHKRAL 466
PP PE + AL+LL++ AL
Sbjct: 504 PPAPETLMRALELLNYLAAL 523
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 243 (90.6 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 53/165 (32%), Positives = 89/165 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ ++R++++ + +N + ++VGETG GK++Q+ Q+L + + CTQPRR
Sbjct: 565 IFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYTSYGMVGCTQPRRVAAMSV 624
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
N LG EVGY I SE++ I + T G+LL E +R+ L+ Y +I+
Sbjct: 625 AKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLRESLRESDLD--HYSAVIM 682
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ +D +DL++++ SAT D K+ +F
Sbjct: 683 DEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFASFF 727
Score = 171 (65.3 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 64/197 (32%), Positives = 100/197 (50%)
Query: 266 LHIHKNESDIEKSILVFLPTYYALE-QQWHLMKPLSSF-----FKVHILHSSVDTE-QAL 318
L IH S + IL+F+P +E +++ L+ V ++S + ++ QA
Sbjct: 763 LQIHL--SGMVGDILIFMPGQEDIEVTSDQIVERLADLENAPALAVLPIYSQLPSDLQAK 820
Query: 319 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWV 374
+ K RK I+ATNIAE+S+T+ + +V+DS C+ L+VF N +I D+ ++ +
Sbjct: 821 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCK-LKVF---NPRIGMDALQVYPI 876
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 434
SQ+ A QR GR GRT GQ YRL T+S F + I + +S +
Sbjct: 877 SQANANQRAGRAGRTGPGQCYRLYTQSAFKN--EMLTTTIPEIQRTNLANVVLLLKSLGV 934
Query: 435 SDPKVLLQKALDPPYPE 451
D +LL +DPP PE
Sbjct: 935 QD--LLLFHFMDPP-PE 948
Score = 37 (18.1 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 604 WCSLHYLVQSSLHHVSEL 621
WC+ H++ ++ V E+
Sbjct: 1058 WCNDHFIHTKAMRKVREV 1075
Score = 37 (18.1 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 105 GHSKHLSERSKIVFKTAGVLLDEMRDR 131
G SK + E K+ ++ D M+++
Sbjct: 517 GDSKAVGEDGKVDYRAEQKFADHMKEK 543
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 244 (91.0 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 53/165 (32%), Positives = 90/165 (54%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL----LAENMEPILCTQPRRFXXXX 83
+ R++I++ V +++V +IVGETG GK++Q+PQ+L +N + CTQPRR
Sbjct: 483 IYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVGCTQPRRVAAMS 542
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
+LG EVGY I + S+++ + + T G+LL E+ + +Y +++
Sbjct: 543 VAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEP-DLGQYSALMI 601
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HER+V +D DL++++ SAT D K++ YF
Sbjct: 602 DEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYF 646
Score = 164 (62.8 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 52/156 (33%), Positives = 80/156 (51%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+LATNIAE+S+TI + YVID + ++ ++S + S++ A QR GR G
Sbjct: 750 RKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAG 809
Query: 388 RTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
R G+ +RL TK +++ LE+ P I + K++ ++L +D
Sbjct: 810 RVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILML-----KSLGIDQLLEFDFMD 864
Query: 447 PPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGR 482
PP E + AL+ L AL ++ RG E T GR
Sbjct: 865 PPPAETIIRALEQL---YALGALNDRG--ELTKIGR 895
Score = 41 (19.5 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 872 LCHSLKTVISEAGDNPI-PWKEVKCVLWYPSLESYSENLESQKTL 915
LC ++ +S G N I P ++ ++P+ +S +T+
Sbjct: 1004 LCDRVEVTVSSCGSNNIVPIQKAITAGFFPNAARLQRGGDSYRTI 1048
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 235 (87.8 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 57/168 (33%), Positives = 84/168 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ R +++ + EN V +IVGETG GK++Q+ Q+L + I CTQPRR
Sbjct: 661 IFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKFGKIGCTQPRRVAAVSV 720
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
+ LG EVGY I S + I + T G+LL E D L+ KY II+
Sbjct: 721 AKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRESFNDPNLD--KYSAIIM 778
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL 191
DE HERS+ +D D+++++ SAT D K+ +F D+
Sbjct: 779 DEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFFGDV 826
Score = 167 (63.8 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 44/111 (39%), Positives = 69/111 (62%)
Query: 308 LHSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNR 364
++S + ++ QA + K RK I+ATNIAE+S+T+ + YVID+ C+ L+V+ +
Sbjct: 906 IYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDTGYCK-LKVY-NPRV 963
Query: 365 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFG-TLEDHECPAI 414
+DS ++ +S++ A QR GR GRT G+ YRL T+S F L D+ P I
Sbjct: 964 GMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNNIPEI 1014
Score = 50 (22.7 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 13/64 (20%), Positives = 30/64 (46%)
Query: 579 DHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAV--HRFRPKF 636
DHL + + + K+ +WC+ HY+ ++ V E+ +L+ + H + +
Sbjct: 1135 DHLTLLHVYQQWKIN-----NYSSQWCAEHYIHIKAMRKVREVRGQLLDIMVQHDMKVES 1189
Query: 637 LGTS 640
G++
Sbjct: 1190 CGSN 1193
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 235 (87.8 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 61/168 (36%), Positives = 87/168 (51%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE---NMEP--ILCTQPRRFXXX 82
V +E+IV+ + EN+V LIVGETG GK++Q+PQFLL + N P I CTQPRR
Sbjct: 195 VFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAI 254
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR--DRGLNALKYKV 140
R +G +GY I +S ++ + F T GVLL + D L+ + +
Sbjct: 255 AVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTH-- 312
Query: 141 IILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+I+DEVHER SD L+++L SA D+ + YF
Sbjct: 313 VIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 360
Score = 159 (61.0 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 56/187 (29%), Positives = 95/187 (50%)
Query: 215 VSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH------KLIHDLVLHI 268
V LE + L + G E SSL +G S + E+ H K+ DL++H+
Sbjct: 556 VDLLESYSATL--EFGNLDE-SSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 612
Query: 269 HKN--ESDIEKSILVFLPTYYALEQ-QWHLMKPLSSF------FKVHILHSSVDTEQALM 319
N S ++L+FLP Y + + ++ F ++V +LHS++ T
Sbjct: 613 LYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKK 672
Query: 320 AMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 378
+K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++VW+S++
Sbjct: 673 VLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 732
Query: 379 AEQRRGR 385
A QR+GR
Sbjct: 733 AIQRKGR 739
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 241 (89.9 bits), Expect = 3.7e-27, Sum P(3) = 3.7e-27
Identities = 62/184 (33%), Positives = 96/184 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFXXXX 83
+ L+E++V+ V +N++ +++GETG GK++Q+ Q+L AE + I CTQPRR
Sbjct: 567 IYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYL-AEAGYTSRGKIGCTQPRRVAAMS 625
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C LG EVGY I S + I + T G+LL E + D L +Y +I+
Sbjct: 626 VAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT--QYAIIM 683
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGER 196
LDE HER++ +D D+++++ SAT D K+ YF + GR
Sbjct: 684 LDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYP 743
Query: 197 VEVL 200
VE+L
Sbjct: 744 VEIL 747
Score = 158 (60.7 bits), Expect = 3.7e-27, Sum P(3) = 3.7e-27
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 254 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 307
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 751 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 808
Query: 308 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 363
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 809 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 868
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 400
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 869 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 905
Score = 49 (22.3 bits), Expect = 3.7e-27, Sum P(3) = 3.7e-27
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 569 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 616
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1015 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1073
Query: 617 HVSELYEDILNAVHRFR 633
++ + +L + R +
Sbjct: 1074 RAQDIRKQMLGIMDRHK 1090
Score = 38 (18.4 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 224 LLGVDHGMTSELSSLRYCS 242
L+G + G EL+ L Y S
Sbjct: 11 LIGSEPGPAEELAKLEYLS 29
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 215 (80.7 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 57/192 (29%), Positives = 90/192 (46%)
Query: 30 SLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE---NMEPILCTQPRRFXXXXXXX 86
++ ++++ ++ +++GETG GKS+QVPQ + N I TQPRR
Sbjct: 165 AVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRVAAISLAS 224
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEV 146
+GG VGYH+ ++KI + T G++L + L KY +I+DE
Sbjct: 225 RVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLD-KYSCVIIDEA 283
Query: 147 HERSVESDXXXXXXXX----XXXXXNDLRVVLMSATADITKYRDYFRDL------GRGER 196
HERS+ SD N LR+++MSAT K++ YF + GR
Sbjct: 284 HERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFP 343
Query: 197 VEVLAI-PSTNQ 207
+EV + P N+
Sbjct: 344 IEVFHVNPKINK 355
Score = 181 (68.8 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 69/226 (30%), Positives = 109/226 (48%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALE----QQWHL--MKPLSSFFKVHI-LHSSVDTEQA 317
V ++H E + ILVFL +E Q L P S+ + + L++++ E+
Sbjct: 370 VKYVHLTEPK-GRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQ 428
Query: 318 LMAM-KICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
A K + RKVI++TNIAE+SVTIP + VIDS + ++ +ID ++ VS+
Sbjct: 429 KEAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSK 488
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 436
+QA+QR GR GR G+ YRL ++ F E P I + + +
Sbjct: 489 AQAKQRAGRAGRDAPGKCYRLYSREDFHKFEAENMPEILRCNLSATFLELM---KLGMKN 545
Query: 437 PKVLLQKALDPPYPEVVGDALDLLDHKRALQKI-SPRGRYEPTFYG 481
P L K +DPP + + AL L A++ + S R ++ T G
Sbjct: 546 PHRL--KLIDPPETDNINAALLELTSLGAIRPVNSDRSKFALTEMG 589
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 241 (89.9 bits), Expect = 4.0e-27, Sum P(3) = 4.0e-27
Identities = 62/184 (33%), Positives = 96/184 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFXXXX 83
+ L+E++V+ V +N++ +++GETG GK++Q+ Q+L AE + I CTQPRR
Sbjct: 536 IYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYL-AEAGYTSRGKIGCTQPRRVAAMS 594
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C LG EVGY I S + I + T G+LL E + D L +Y +I+
Sbjct: 595 VAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT--QYAIIM 652
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGER 196
LDE HER++ +D D+++++ SAT D K+ YF + GR
Sbjct: 653 LDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYP 712
Query: 197 VEVL 200
VE+L
Sbjct: 713 VEIL 716
Score = 158 (60.7 bits), Expect = 4.0e-27, Sum P(3) = 4.0e-27
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 254 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 307
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 720 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 777
Query: 308 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 363
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 778 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 837
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 400
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 838 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 874
Score = 49 (22.3 bits), Expect = 4.0e-27, Sum P(3) = 4.0e-27
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 569 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 616
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 984 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1042
Query: 617 HVSELYEDILNAVHRFR 633
++ + +L + R +
Sbjct: 1043 RAQDIRKQMLGIMDRHK 1059
Score = 38 (18.4 bits), Expect = 5.5e-26, Sum P(3) = 5.5e-26
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 594 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 645
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1107 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1156
Score = 38 (18.4 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 224 LLGVDHGMTSELSSLRYCS 242
L+G + G EL+ L Y S
Sbjct: 11 LMGSEPGPAEELAKLEYLS 29
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 241 (89.9 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 62/184 (33%), Positives = 96/184 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFXXXX 83
+ L+E++V+ V +N++ +++GETG GK++Q+ Q+L AE + I CTQPRR
Sbjct: 559 IYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYL-AEAGYTSRGKIGCTQPRRVAAMS 617
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C LG EVGY I S + I + T G+LL E + D L +Y +I+
Sbjct: 618 VAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT--QYAIIM 675
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGER 196
LDE HER++ +D D+++++ SAT D K+ YF + GR
Sbjct: 676 LDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYP 735
Query: 197 VEVL 200
VE+L
Sbjct: 736 VEIL 739
Score = 158 (60.7 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 254 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 307
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 743 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 800
Query: 308 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 363
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 801 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 860
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 400
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 861 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 897
Score = 49 (22.3 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 569 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 616
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1007 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1065
Query: 617 HVSELYEDILNAVHRFR 633
++ + +L + R +
Sbjct: 1066 RAQDIRKQMLGIMDRHK 1082
Score = 38 (18.4 bits), Expect = 5.6e-26, Sum P(3) = 5.6e-26
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 594 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 645
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1130 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1179
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 241 (89.9 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 62/184 (33%), Positives = 96/184 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFXXXX 83
+ L+E++V+ V +N++ +++GETG GK++Q+ Q+L AE + I CTQPRR
Sbjct: 563 IYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYL-AEAGYTSRGKIGCTQPRRVAAMS 621
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C LG EVGY I S + I + T G+LL E + D L +Y +I+
Sbjct: 622 VAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT--QYAIIM 679
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGER 196
LDE HER++ +D D+++++ SAT D K+ YF + GR
Sbjct: 680 LDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYP 739
Query: 197 VEVL 200
VE+L
Sbjct: 740 VEIL 743
Score = 158 (60.7 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 254 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 307
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 747 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 804
Query: 308 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 363
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 805 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 864
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 400
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 865 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 901
Score = 49 (22.3 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 569 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 616
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1011 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1069
Query: 617 HVSELYEDILNAVHRFR 633
++ + +L + R +
Sbjct: 1070 RAQDIRKQMLGIMDRHK 1086
Score = 38 (18.4 bits), Expect = 5.6e-26, Sum P(3) = 5.6e-26
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 594 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 645
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1134 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1183
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 241 (89.9 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 62/184 (33%), Positives = 96/184 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFXXXX 83
+ L+E++V+ V +N++ +++GETG GK++Q+ Q+L AE + I CTQPRR
Sbjct: 567 IYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYL-AEAGYTSRGKIGCTQPRRVAAMS 625
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C LG EVGY I S + I + T G+LL E + D L +Y +I+
Sbjct: 626 VAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT--QYAIIM 683
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGER 196
LDE HER++ +D D+++++ SAT D K+ YF + GR
Sbjct: 684 LDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYP 743
Query: 197 VEVL 200
VE+L
Sbjct: 744 VEIL 747
Score = 158 (60.7 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 254 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 307
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 751 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 808
Query: 308 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 363
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 809 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 868
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 400
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 869 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 905
Score = 49 (22.3 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 569 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 616
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1015 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1073
Query: 617 HVSELYEDILNAVHRFR 633
++ + +L + R +
Sbjct: 1074 RAQDIRKQMLGIMDRHK 1090
Score = 38 (18.4 bits), Expect = 5.7e-26, Sum P(3) = 5.7e-26
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 594 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 645
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1138 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1187
Score = 38 (18.4 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 224 LLGVDHGMTSELSSLRYCS 242
L+G + G EL+ L Y S
Sbjct: 11 LIGSEPGPAEELAKLEYLS 29
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 241 (89.9 bits), Expect = 4.3e-27, Sum P(3) = 4.3e-27
Identities = 62/184 (33%), Positives = 96/184 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFXXXX 83
+ L+E++V+ V +N++ +++GETG GK++Q+ Q+L AE + I CTQPRR
Sbjct: 577 IYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYL-AEAGYTSRGKIGCTQPRRVAAMS 635
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C LG EVGY I S + I + T G+LL E + D L +Y +I+
Sbjct: 636 VAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT--QYAIIM 693
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGER 196
LDE HER++ +D D+++++ SAT D K+ YF + GR
Sbjct: 694 LDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYP 753
Query: 197 VEVL 200
VE+L
Sbjct: 754 VEIL 757
Score = 158 (60.7 bits), Expect = 4.3e-27, Sum P(3) = 4.3e-27
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 254 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 307
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 761 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 818
Query: 308 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 363
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 819 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 878
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 400
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 879 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 915
Score = 49 (22.3 bits), Expect = 4.3e-27, Sum P(3) = 4.3e-27
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 569 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 616
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1025 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1083
Query: 617 HVSELYEDILNAVHRFR 633
++ + +L + R +
Sbjct: 1084 RAQDIRKQMLGIMDRHK 1100
Score = 38 (18.4 bits), Expect = 5.9e-26, Sum P(3) = 5.9e-26
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 594 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 645
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1148 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1197
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 240 (89.5 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 61/184 (33%), Positives = 96/184 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFXXXX 83
+ L+E++++ V +N++ +++GETG GK++Q+ Q+L AE + I CTQPRR
Sbjct: 515 IFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYL-AEAGYTSRGKIGCTQPRRVAAMS 573
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C LG EVGY I S + I + T G+LL E + D L +Y +I+
Sbjct: 574 VAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT--QYAIIM 631
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGER 196
LDE HER++ +D D+++++ SAT D K+ YF + GR
Sbjct: 632 LDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYP 691
Query: 197 VEVL 200
VE+L
Sbjct: 692 VEIL 695
Score = 158 (60.7 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 254 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 307
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 699 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 756
Query: 308 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 363
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 757 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 816
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 400
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 817 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 853
Score = 49 (22.3 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 569 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 616
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 963 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1021
Query: 617 HVSELYEDILNAVHRFR 633
++ + +L + R +
Sbjct: 1022 RAQDIRKQMLGIMDRHK 1038
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 191 LGRGERVEVLAIPSTNQRTIFQRRVSYLEQVT-ELLGVDH-----GMTSELSSLRYCSGP 244
+ +G+RV+V + T +T + ++Q T E L + G T+E +S+R P
Sbjct: 293 VSKGQRVKVKVLSFTGSKTSLSMKD--VDQDTGEDLNPNRRRNLVGETNEETSMRNPDRP 350
Query: 245 SP-SMANAEIKPEV 257
S S+ NA PEV
Sbjct: 351 SHLSLVNA---PEV 361
Score = 38 (18.4 bits), Expect = 6.1e-26, Sum P(3) = 6.1e-26
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 594 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 645
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1086 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1135
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 241 (89.9 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 62/184 (33%), Positives = 96/184 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFXXXX 83
+ L+E++V+ V +N++ +++GETG GK++Q+ Q+L AE + I CTQPRR
Sbjct: 589 IYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYL-AEAGYTSRGKIGCTQPRRVAAMS 647
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C LG EVGY I S + I + T G+LL E + D L +Y +I+
Sbjct: 648 VAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT--QYAIIM 705
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGER 196
LDE HER++ +D D+++++ SAT D K+ YF + GR
Sbjct: 706 LDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYP 765
Query: 197 VEVL 200
VE+L
Sbjct: 766 VEIL 769
Score = 158 (60.7 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 254 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 307
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 773 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 830
Query: 308 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 363
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 831 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 890
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 400
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 891 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 927
Score = 49 (22.3 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 569 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 616
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1037 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1095
Query: 617 HVSELYEDILNAVHRFR 633
++ + +L + R +
Sbjct: 1096 RAQDIRKQMLGIMDRHK 1112
Score = 38 (18.4 bits), Expect = 6.1e-26, Sum P(3) = 6.1e-26
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 594 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 645
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1160 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1209
Score = 38 (18.4 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 224 LLGVDHGMTSELSSLRYCS 242
L+G + G EL+ L Y S
Sbjct: 11 LMGSEPGPAEELAKLEYLS 29
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 241 (89.9 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 62/184 (33%), Positives = 96/184 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFXXXX 83
+ L+E++V+ V +N++ +++GETG GK++Q+ Q+L AE + I CTQPRR
Sbjct: 591 IYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYL-AEAGYTSRGKIGCTQPRRVAAMS 649
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
C LG EVGY I S + I + T G+LL E + D L +Y +I+
Sbjct: 650 VAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT--QYAIIM 707
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGER 196
LDE HER++ +D D+++++ SAT D K+ YF + GR
Sbjct: 708 LDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYP 767
Query: 197 VEVL 200
VE+L
Sbjct: 768 VEIL 771
Score = 158 (60.7 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 254 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 307
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 775 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 832
Query: 308 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 363
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 833 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 892
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 400
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 893 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 929
Score = 49 (22.3 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 569 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 616
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1039 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1097
Query: 617 HVSELYEDILNAVHRFR 633
++ + +L + R +
Sbjct: 1098 RAQDIRKQMLGIMDRHK 1114
Score = 38 (18.4 bits), Expect = 6.2e-26, Sum P(3) = 6.2e-26
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 594 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 645
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1162 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1211
Score = 38 (18.4 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 224 LLGVDHGMTSELSSLRYCS 242
L+G + G EL+ L Y S
Sbjct: 11 LMGSEPGPAEELAKLEYLS 29
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 232 (86.7 bits), Expect = 4.7e-27, Sum P(2) = 4.7e-27
Identities = 73/276 (26%), Positives = 126/276 (45%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFXXXXXXXX 87
+ R+ + E + +RV ++ G+TGCGKS+QVPQ+L I CTQPRR
Sbjct: 148 IARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRSIACTQPRRLACVSLCKR 207
Query: 88 XXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVH 147
+ G V + I + ++ + I+F T G+LL ++ N +Y +ILDE+H
Sbjct: 208 VAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAA-NLDQYDALILDEIH 266
Query: 148 ERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIPSTNQ 207
ER++ D L+++LMSAT ++ + YF + G ++ +P
Sbjct: 267 ERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEG----ARLVQVPGR-- 320
Query: 208 RTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIH--DLV 265
+F ++ YL L + G + S R P+P + + + + D++
Sbjct: 321 --LFPIKLRYLPPPA--LELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTSERGDVL 376
Query: 266 LHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSS 301
+ + ++IE +V YA EQ L+ PL S
Sbjct: 377 IFV-SGVNEIES--VVEAVHEYATEQTHWLVLPLHS 409
Score = 166 (63.5 bits), Expect = 4.7e-27, Sum P(2) = 4.7e-27
Identities = 56/191 (29%), Positives = 88/191 (46%)
Query: 287 YALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKV 346
YA EQ L+ PL S +Q+ + + RK I++TNIAE+S+T+ V
Sbjct: 395 YATEQTHWLVLPLHS--------GQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGV 446
Query: 347 AYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTL 406
+V+DS + ++ +D K + WVS+S A+QR+GR GRT G +RL T +
Sbjct: 447 RFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAF 506
Query: 407 EDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL 466
E + P I + S + D + ++ P E + + L AL
Sbjct: 507 EAYPTPEIYRVPLDTMLLQMV---SMGLPDVRAF--PFIEAPETERIEQTILALKQHCAL 561
Query: 467 ---QKISPRGR 474
+KI+P GR
Sbjct: 562 SVEEKITPLGR 572
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 207 (77.9 bits), Expect = 6.0e-27, Sum P(2) = 6.0e-27
Identities = 66/208 (31%), Positives = 100/208 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 314
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 626 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 683
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 684 DQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 743
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 744 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 803
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL 460
A+ L KA+D P + V +A+ LL
Sbjct: 804 AVE----FLSKAVDSPNIKAVDEAVILL 827
Score = 191 (72.3 bits), Expect = 6.0e-27, Sum P(2) = 6.0e-27
Identities = 51/166 (30%), Positives = 81/166 (48%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 412 RDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSV 471
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
L VG+ + SK S ++F T G+LL +++ L + + +I
Sbjct: 472 AQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGVSH--VI 529
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+DEVHER V +D LR+VLMSAT D ++ YF
Sbjct: 530 VDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 575
Score = 42 (19.8 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 560 GNLCAFQFWQHVFKDKQRLDHLQQVLKFDETK 591
G LC WQ + +QRL Q+ L E+K
Sbjct: 642 GILCFLPGWQEIKGVQQRL---QEALGMHESK 670
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 207 (77.9 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 66/208 (31%), Positives = 100/208 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 314
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL 460
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
Score = 191 (72.3 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 51/166 (30%), Positives = 81/166 (48%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 440 RDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSV 499
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
L VG+ + SK S ++F T G+LL +++ L + + +I
Sbjct: 500 AQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGVSH--VI 557
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+DEVHER V +D LR+VLMSAT D ++ YF
Sbjct: 558 VDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 603
Score = 42 (19.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 560 GNLCAFQFWQHVFKDKQRLDHLQQVLKFDETK 591
G LC WQ + +QRL Q+ L E+K
Sbjct: 670 GILCFLPGWQEIKGVQQRL---QEALGMHESK 698
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 233 (87.1 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 55/164 (33%), Positives = 82/164 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ +L+ +++ + +N V +++GETG GK++Q+PQ+L N + CTQPRR
Sbjct: 633 IYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVAAMSI 692
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
C LG EVGY I S + I + T G+LL E L KY IILD
Sbjct: 693 AKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTL-LTKYSFIILD 751
Query: 145 EVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
E HER++ +D D ++++ SAT D K+ YF
Sbjct: 752 EAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYF 795
Score = 165 (63.1 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 58/162 (35%), Positives = 86/162 (53%)
Query: 265 VLHIHKNESDIEKSILVFLPTY----YALEQQWHLMKPLSSFFKVHIL----HSSVDTE- 315
VL+IH NE + ILVFL A E MK L S ++ +SS+ +E
Sbjct: 830 VLNIHLNEHPGD--ILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEM 887
Query: 316 QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKIDSAELVW 373
Q+++ RK ILATNIAE+S+TI + +VID C+ + +D R +DS +
Sbjct: 888 QSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKK--YDSKRDMDSLIVAP 945
Query: 374 VSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAI 414
+S++ A+QR GR GRT G+ YRL T+ + + + P I
Sbjct: 946 ISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEI 987
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 233 (87.1 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 55/164 (33%), Positives = 82/164 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ +L+ +++ + +N V +++GETG GK++Q+PQ+L N + CTQPRR
Sbjct: 633 IYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVAAMSI 692
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
C LG EVGY I S + I + T G+LL E L KY IILD
Sbjct: 693 AKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTL-LTKYSFIILD 751
Query: 145 EVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
E HER++ +D D ++++ SAT D K+ YF
Sbjct: 752 EAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYF 795
Score = 165 (63.1 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 58/162 (35%), Positives = 86/162 (53%)
Query: 265 VLHIHKNESDIEKSILVFLPTY----YALEQQWHLMKPLSSFFKVHIL----HSSVDTE- 315
VL+IH NE + ILVFL A E MK L S ++ +SS+ +E
Sbjct: 830 VLNIHLNEHPGD--ILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEM 887
Query: 316 QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKIDSAELVW 373
Q+++ RK ILATNIAE+S+TI + +VID C+ + +D R +DS +
Sbjct: 888 QSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKK--YDSKRDMDSLIVAP 945
Query: 374 VSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAI 414
+S++ A+QR GR GRT G+ YRL T+ + + + P I
Sbjct: 946 ISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEI 987
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 254 (94.5 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 60/165 (36%), Positives = 89/165 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
V + R+K++ + EN V +IVGETG GK++Q+ Q+LL + I CTQPRR
Sbjct: 443 VFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSV 502
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
+LG +VGY I SE++ I + T G+LL E + D L+ +Y II+
Sbjct: 503 ARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLD--QYSAIIM 560
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ +D DL++++ SAT D K+ D+F
Sbjct: 561 DEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFF 605
Score = 150 (57.9 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 48/140 (34%), Positives = 77/140 (55%)
Query: 275 IEKSILVFLPTYYALEQQWHLMKP-LSSF-----FKVHILHSSVDTE-QALMAMKICKSH 327
++ IL+F+P +E ++K L V ++S + ++ QA + +
Sbjct: 649 MDGDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGM 708
Query: 328 RKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWVSQSQAEQRR 383
RK I+ATNIAE+S+T+ + +VID C+ ++V+ N +I D+ + VSQ+ A QR
Sbjct: 709 RKAIVATNIAETSLTVDGILFVIDPGFCK-MKVY---NPRIGMDALSIFPVSQASANQRT 764
Query: 384 GRTGRTCDGQVYRLVTKSFF 403
GR GRT GQ YRL T+ F
Sbjct: 765 GRAGRTGPGQCYRLYTERQF 784
Score = 40 (19.1 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 599 KIEEEWCSLHYLVQSSLHHVSEL 621
K +WC+ +YL +L V E+
Sbjct: 932 KYSAKWCADNYLHVKALKKVREV 954
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 254 (94.5 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 60/165 (36%), Positives = 89/165 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
V + R+K++ + EN V +IVGETG GK++Q+ Q+LL + I CTQPRR
Sbjct: 443 VFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSV 502
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
+LG +VGY I SE++ I + T G+LL E + D L+ +Y II+
Sbjct: 503 ARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLD--QYSAIIM 560
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ +D DL++++ SAT D K+ D+F
Sbjct: 561 DEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFF 605
Score = 150 (57.9 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 48/140 (34%), Positives = 77/140 (55%)
Query: 275 IEKSILVFLPTYYALEQQWHLMKP-LSSF-----FKVHILHSSVDTE-QALMAMKICKSH 327
++ IL+F+P +E ++K L V ++S + ++ QA + +
Sbjct: 649 MDGDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGM 708
Query: 328 RKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWVSQSQAEQRR 383
RK I+ATNIAE+S+T+ + +VID C+ ++V+ N +I D+ + VSQ+ A QR
Sbjct: 709 RKAIVATNIAETSLTVDGILFVIDPGFCK-MKVY---NPRIGMDALSIFPVSQASANQRT 764
Query: 384 GRTGRTCDGQVYRLVTKSFF 403
GR GRT GQ YRL T+ F
Sbjct: 765 GRAGRTGPGQCYRLYTERQF 784
Score = 40 (19.1 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 599 KIEEEWCSLHYLVQSSLHHVSEL 621
K +WC+ +YL +L V E+
Sbjct: 932 KYSAKWCADNYLHVKALKKVREV 954
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 230 (86.0 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 54/163 (33%), Positives = 88/163 (53%)
Query: 30 SLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAEN---MEPILCTQPRRFXXXXXXX 86
++RE ++ + +N+V ++VGETG GK++Q+ QFL + + I CTQPRR
Sbjct: 307 AVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLGMIGCTQPRRVAAMSVAK 366
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIILDE 145
+LGG VGY I S+ + I + T GVLL E + + L+ +Y II+DE
Sbjct: 367 RVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPDLD--RYSCIIMDE 424
Query: 146 VHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
HER++ +D DL++++ SAT + ++ D+F
Sbjct: 425 AHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFF 467
Score = 157 (60.3 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 62/204 (30%), Positives = 101/204 (49%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKP----LSSFFKVHIL--HSSVDTE-QA 317
VL+IH + + ILVF+ +E L++ L+ K+ IL +S + + QA
Sbjct: 502 VLNIHVSMGTGD--ILVFMTGQEDIEVTCELVRERLDALNDPPKLSILPIYSQMPADLQA 559
Query: 318 LMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQS 377
+ + RK I+ATNIAE+S+T+ + YV+D+ S ++ +D+ ++ +SQ+
Sbjct: 560 KIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQA 619
Query: 378 QAEQRRGRTGRTCDGQVYRLVT-KSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 436
A QR GR GRT G+ +RL T K+F L P I I +S + D
Sbjct: 620 NASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLI---KSLGVKD 676
Query: 437 PKVLLQKALDPPYPEVVGDAL-DL 459
+L +DPP + + +L DL
Sbjct: 677 --MLDFDFMDPPPQDTMTTSLFDL 698
Score = 56 (24.8 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 602 EEWCSLHYLVQSSLHHVSELYEDILN 627
+ WCS H+L SL E+ + +L+
Sbjct: 796 DAWCSRHFLHSKSLRRAKEVRDQLLD 821
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 206 (77.6 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 49/136 (36%), Positives = 74/136 (54%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLA--------ENMEPIL-CTQPRR 78
++ + ++I+E + + +I G+TGCGK++QVPQFL + I+ TQPRR
Sbjct: 243 IVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGITQPRR 302
Query: 79 FXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKY 138
LG EVG+ + + K + E S I F T G+LL E+++ L +Y
Sbjct: 303 VAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFL-LRRY 361
Query: 139 KVIILDEVHERSVESD 154
VIILDE HERS+ +D
Sbjct: 362 SVIILDEAHERSLNTD 377
Score = 192 (72.6 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 51/154 (33%), Positives = 78/154 (50%)
Query: 325 KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRG 384
K R V++ATN+AE+S+TIP + YV+D+ R +D ++S E+ W+SQ+ A QR G
Sbjct: 670 KEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAG 729
Query: 385 RTGRTCDGQVYRLVTKSFFGTL-EDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQK 443
R GRT G YRL + + F + E+ P I + K+++ PKV
Sbjct: 730 RAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPVDGVILLM-----KSMNIPKVENFP 784
Query: 444 ALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP 477
PP P + +A L +AL+ + G P
Sbjct: 785 FPTPPEPSAIREAERCL---KALEALDSNGGLTP 815
Score = 40 (19.1 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 350 IDSCRSLQVFWDVNRKIDSAEL-VW 373
ID+ SL+ W+ N + +E+ VW
Sbjct: 1188 IDTLESLRKNWEQNPNVLYSEIEVW 1212
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 207 (77.9 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 66/208 (31%), Positives = 100/208 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 314
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 682 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 739
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 740 DQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 799
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 800 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 859
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL 460
A+ L KA+D P + V +A+ LL
Sbjct: 860 AVE----FLSKAVDSPNIKAVDEAVILL 883
Score = 190 (71.9 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 468 RDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSV 527
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
L VG+ + SK + ++F T G+LL +++ L + + +I
Sbjct: 528 AQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSH--VI 585
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+DEVHER V +D LR+VLMSAT D ++ YF
Sbjct: 586 VDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 631
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 560 GNLCAFQFWQHVFKDKQRLDHLQQVLKFDETK 591
G LC WQ + +QRL Q+ L E+K
Sbjct: 698 GILCFLPGWQEIKGVQQRL---QEALGMHESK 726
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 195 (73.7 bits), Expect = 9.2e-27, Sum P(4) = 9.2e-27
Identities = 46/112 (41%), Positives = 68/112 (60%)
Query: 304 KVHILHSSV-DTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 362
K+ L+SS+ + +Q ++ + + RKVIL+TNIAE+SVTIP + YVIDS + ++DV
Sbjct: 401 KILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDV 460
Query: 363 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 414
NR + + +S+ A QR GR GR GQVYR+ TK + + P I
Sbjct: 461 NRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEI 512
Score = 163 (62.4 bits), Expect = 9.2e-27, Sum P(4) = 9.2e-27
Identities = 49/169 (28%), Positives = 83/169 (49%)
Query: 71 ILCTQPRRFXXXXXXXXXXXG-RNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR 129
+L + PRR + ++G VGY I S++++I F T G+L+ E+
Sbjct: 72 MLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIM 131
Query: 130 DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFR 189
+ L KYK +ILDE+HERS+ +D ++++LMSAT DI + +F
Sbjct: 132 NDPL-LKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFN 190
Query: 190 DLGRGERVEVLAIP-STNQRTIF--QRRVS-Y-LEQVTELLGVDHGMTS 233
+ ++ IP ++ TI+ +R + Y L V+ +L + G TS
Sbjct: 191 N------PPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIHFGNTS 233
Score = 87 (35.7 bits), Expect = 9.2e-27, Sum P(4) = 9.2e-27
Identities = 14/36 (38%), Positives = 26/36 (72%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL 63
++ + +I + + +N + +I GETGCGK++QVPQ +
Sbjct: 6 ILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQII 41
Score = 40 (19.1 bits), Expect = 9.2e-27, Sum P(4) = 9.2e-27
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 268 IHKNESDIEKSILVFLPTYYALEQQWHLMKP-LSSFFKVHILH 309
I K E ILVFLP +E ++K L +K ++L+
Sbjct: 308 IKKTEDKSLGDILVFLPGQEEIEMVNIMLKEKLKIIYKGNLLN 350
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 195 (73.7 bits), Expect = 9.2e-27, Sum P(4) = 9.2e-27
Identities = 46/112 (41%), Positives = 68/112 (60%)
Query: 304 KVHILHSSV-DTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 362
K+ L+SS+ + +Q ++ + + RKVIL+TNIAE+SVTIP + YVIDS + ++DV
Sbjct: 401 KILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDV 460
Query: 363 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 414
NR + + +S+ A QR GR GR GQVYR+ TK + + P I
Sbjct: 461 NRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEI 512
Score = 163 (62.4 bits), Expect = 9.2e-27, Sum P(4) = 9.2e-27
Identities = 49/169 (28%), Positives = 83/169 (49%)
Query: 71 ILCTQPRRFXXXXXXXXXXXG-RNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR 129
+L + PRR + ++G VGY I S++++I F T G+L+ E+
Sbjct: 72 MLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIM 131
Query: 130 DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFR 189
+ L KYK +ILDE+HERS+ +D ++++LMSAT DI + +F
Sbjct: 132 NDPL-LKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFN 190
Query: 190 DLGRGERVEVLAIP-STNQRTIF--QRRVS-Y-LEQVTELLGVDHGMTS 233
+ ++ IP ++ TI+ +R + Y L V+ +L + G TS
Sbjct: 191 N------PPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIHFGNTS 233
Score = 87 (35.7 bits), Expect = 9.2e-27, Sum P(4) = 9.2e-27
Identities = 14/36 (38%), Positives = 26/36 (72%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL 63
++ + +I + + +N + +I GETGCGK++QVPQ +
Sbjct: 6 ILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQII 41
Score = 40 (19.1 bits), Expect = 9.2e-27, Sum P(4) = 9.2e-27
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 268 IHKNESDIEKSILVFLPTYYALEQQWHLMKP-LSSFFKVHILH 309
I K E ILVFLP +E ++K L +K ++L+
Sbjct: 308 IKKTEDKSLGDILVFLPGQEEIEMVNIMLKEKLKIIYKGNLLN 350
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 207 (77.9 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 66/208 (31%), Positives = 100/208 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 314
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 680 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 737
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 738 DQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 797
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 798 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMPEKT 857
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL 460
A+ L KA+D P + V +A+ LL
Sbjct: 858 AVE----FLSKAVDSPNIKAVDEAVILL 881
Score = 189 (71.6 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 49/166 (29%), Positives = 81/166 (48%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 466 RDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSV 525
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
L VG+ + SK + ++F T G+LL +++ L + + ++
Sbjct: 526 AQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSH--VV 583
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+DEVHER V +D LR+VLMSAT D ++ YF
Sbjct: 584 VDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 629
Score = 42 (19.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 560 GNLCAFQFWQHVFKDKQRLDHLQQVLKFDETK 591
G LC WQ + +QRL Q+ L E+K
Sbjct: 696 GILCFLPGWQEIKGVQQRL---QEALGMHESK 724
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 206 (77.6 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 314
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL 460
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
Score = 189 (71.6 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 440 RDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRRISAVSV 499
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
L VG+ + SK + ++F T G+LL +++ L + + +I
Sbjct: 500 AQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSH--VI 557
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+DEVHER V +D LR+VLMSAT D ++ YF
Sbjct: 558 VDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 603
Score = 42 (19.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 560 GNLCAFQFWQHVFKDKQRLDHLQQVLKFDETK 591
G LC WQ + +QRL Q+ L E+K
Sbjct: 670 GILCFLPGWQEIKGVQQRL---QEALGMHESK 698
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 239 (89.2 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 58/165 (35%), Positives = 84/165 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL----LAENMEPILCTQPRRFXXXX 83
V ++ +++ + E +V LIV ETG GK++Q+PQFL + + I CTQPRR
Sbjct: 420 VYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVAAMS 479
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
+ LG EVGY I SE++ I + T G+LL E + Y VII+
Sbjct: 480 VAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEP-DLASYSVIII 538
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HER++ +D DL+V++ SAT D K+ YF
Sbjct: 539 DEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYF 583
Score = 154 (59.3 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 68/227 (29%), Positives = 105/227 (46%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHI-------LHSSVDTE-Q 316
+L IH + ILVFL +E M+ L I +++++ +E Q
Sbjct: 618 ILQIHTTQP--AGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQ 675
Query: 317 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
A + RKV+LATNIAE+S+TI V +VIDS Q ++ ++S V S+
Sbjct: 676 AKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSR 735
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAIS 435
+ A+QR GR GR G+ +RL T+ + L+ P I + K++
Sbjct: 736 ASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLL-----KSLG 790
Query: 436 DPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGR 482
+L +D P PE + +L+LL AL ++ RG E T GR
Sbjct: 791 INNLLDFDFMDAPPPETLMRSLELL---YALGALNNRG--ELTKLGR 832
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 349 (127.9 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 123/422 (29%), Positives = 189/422 (44%)
Query: 71 ILCTQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMR 129
I+ TQPRR R E G GY + L + I+F T GVLL ++
Sbjct: 437 IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 495
Query: 130 DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFR 189
+ G+ + + +I+DE+HER + +D ++R+VLMSAT D + + +YF
Sbjct: 496 EAGIRGISH--VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFF 553
Query: 190 DL------GRGERVEVLAIPSTNQRTIF--QRRVSYLEQVTELLGVDHGMTSEL-SSLRY 240
+ GR V+ + Q T F + + + G D L Y
Sbjct: 554 NCPIIEVYGRTFPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEY 613
Query: 241 CSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKP 298
+ SMA K +LI L+L+I ++ ++LVFLP + + Q HL M P
Sbjct: 614 GAETRISMAQLNEKETPFELIEALLLYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNP 671
Query: 299 L--SSFFKVHILHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRS 355
S +++ LHS + E+ S K+IL+TNIAE+S+TI V YVIDSC+
Sbjct: 672 HFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQ 731
Query: 356 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIX 415
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 732 KVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMF 791
Query: 416 XXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPR 472
I I L KA++PP + V +A L LD A +++P
Sbjct: 792 RTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 848
Query: 473 GR 474
GR
Sbjct: 849 GR 850
Score = 248 (92.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 89/310 (28%), Positives = 142/310 (45%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
V +I+E + +N V +I G TGCGK++QVPQF+L + ++ I+ TQPRR
Sbjct: 387 VKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRRIS 446
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYK 139
R E G GY + L + I+F T GVLL ++ + G+ + +
Sbjct: 447 AVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-EAGIRGISH- 504
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
+I+DE+HER + +D ++R+VLMSAT D + + +YF + GR
Sbjct: 505 -VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGR 563
Query: 194 GERVEVLAIPSTNQRTIF--QRRVSYLEQVTELLGVDHGMTSEL-SSLRYCSGPSPSMAN 250
V+ + Q T F + + + G D L Y + SMA
Sbjct: 564 TFPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEYGAETRISMAQ 623
Query: 251 AEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL--SSFFKVH 306
K +LI L+L+I ++ ++LVFLP + + Q HL M P S +++
Sbjct: 624 LNEKETPFELIEALLLYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQIL 681
Query: 307 ILHSSVDTEQ 316
LHS + E+
Sbjct: 682 PLHSQIPREE 691
Score = 237 (88.5 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 79/247 (31%), Positives = 117/247 (47%)
Query: 247 SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL--SSF 302
SMA K +LI L+L+I ++ ++LVFLP + + Q HL M P S
Sbjct: 620 SMAQLNEKETPFELIEALLLYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHR 677
Query: 303 FKVHILHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 361
+++ LHS + E+ S K+IL+TNIAE+S+TI V YVIDSC+ +
Sbjct: 678 YQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFT 737
Query: 362 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXX 421
+ + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 738 AHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHE 797
Query: 422 XXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGRY--- 475
I I L KA++PP + V +A L LD A +++P GR
Sbjct: 798 IALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAK 854
Query: 476 ---EPTF 479
EP F
Sbjct: 855 LPIEPRF 861
Score = 42 (19.8 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 782 CIFSHDLGQPVLPSSSFTCLPEDGVANAASL 812
CIF +G + S+ TC PE ++ L
Sbjct: 869 CIFY--VGDAICTISAATCFPEPFISEGKRL 897
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 349 (127.9 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 123/422 (29%), Positives = 189/422 (44%)
Query: 71 ILCTQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMR 129
I+ TQPRR R E G GY + L + I+F T GVLL ++
Sbjct: 437 IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 495
Query: 130 DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFR 189
+ G+ + + +I+DE+HER + +D ++R+VLMSAT D + + +YF
Sbjct: 496 EAGIRGISH--VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFF 553
Query: 190 DL------GRGERVEVLAIPSTNQRTIF--QRRVSYLEQVTELLGVDHGMTSEL-SSLRY 240
+ GR V+ + Q T F + + + G D L Y
Sbjct: 554 NCPIIEVYGRTFPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEY 613
Query: 241 CSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKP 298
+ SMA K +LI L+L+I ++ ++LVFLP + + Q HL M P
Sbjct: 614 GAETRISMAQLNEKETPFELIEALLLYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNP 671
Query: 299 L--SSFFKVHILHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRS 355
S +++ LHS + E+ S K+IL+TNIAE+S+TI V YVIDSC+
Sbjct: 672 HFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQ 731
Query: 356 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIX 415
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 732 KVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMF 791
Query: 416 XXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPR 472
I I L KA++PP + V +A L LD A +++P
Sbjct: 792 RTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 848
Query: 473 GR 474
GR
Sbjct: 849 GR 850
Score = 248 (92.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 89/310 (28%), Positives = 142/310 (45%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
V +I+E + +N V +I G TGCGK++QVPQF+L + ++ I+ TQPRR
Sbjct: 387 VKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRRIS 446
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYK 139
R E G GY + L + I+F T GVLL ++ + G+ + +
Sbjct: 447 AVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-EAGIRGISH- 504
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
+I+DE+HER + +D ++R+VLMSAT D + + +YF + GR
Sbjct: 505 -VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGR 563
Query: 194 GERVEVLAIPSTNQRTIF--QRRVSYLEQVTELLGVDHGMTSEL-SSLRYCSGPSPSMAN 250
V+ + Q T F + + + G D L Y + SMA
Sbjct: 564 TFPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEYGAETRISMAQ 623
Query: 251 AEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL--SSFFKVH 306
K +LI L+L+I ++ ++LVFLP + + Q HL M P S +++
Sbjct: 624 LNEKETPFELIEALLLYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQIL 681
Query: 307 ILHSSVDTEQ 316
LHS + E+
Sbjct: 682 PLHSQIPREE 691
Score = 237 (88.5 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 79/247 (31%), Positives = 117/247 (47%)
Query: 247 SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL--SSF 302
SMA K +LI L+L+I ++ ++LVFLP + + Q HL M P S
Sbjct: 620 SMAQLNEKETPFELIEALLLYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHR 677
Query: 303 FKVHILHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 361
+++ LHS + E+ S K+IL+TNIAE+S+TI V YVIDSC+ +
Sbjct: 678 YQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFT 737
Query: 362 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXX 421
+ + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 738 AHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHE 797
Query: 422 XXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGRY--- 475
I I L KA++PP + V +A L LD A +++P GR
Sbjct: 798 IALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAK 854
Query: 476 ---EPTF 479
EP F
Sbjct: 855 LPIEPRF 861
Score = 42 (19.8 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 782 CIFSHDLGQPVLPSSSFTCLPEDGVANAASL 812
CIF +G + S+ TC PE ++ L
Sbjct: 869 CIFY--VGDAICTISAATCFPEPFISEGKRL 897
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 206 (77.6 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 314
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 682 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 739
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 740 DQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 799
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 800 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 859
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL 460
A+ L KA+D P + V +A+ LL
Sbjct: 860 AVE----FLSKAVDSPNIKAVDEAVILL 883
Score = 189 (71.6 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 468 RDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRRISAVSV 527
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
L VG+ + SK + ++F T G+LL +++ L + + +I
Sbjct: 528 AQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSH--VI 585
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+DEVHER V +D LR+VLMSAT D ++ YF
Sbjct: 586 VDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 631
Score = 42 (19.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 560 GNLCAFQFWQHVFKDKQRLDHLQQVLKFDETK 591
G LC WQ + +QRL Q+ L E+K
Sbjct: 698 GILCFLPGWQEIKGVQQRL---QEALGMHESK 726
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 206 (77.6 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 314
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL 460
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
Score = 188 (71.2 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 440 RDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSV 499
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
L VG+ + SK + ++F T G+LL +++ L + + +I
Sbjct: 500 AQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSH--VI 557
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+DEVHER V +D LR+VLMSAT D ++ YF
Sbjct: 558 VDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 603
Score = 42 (19.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 560 GNLCAFQFWQHVFKDKQRLDHLQQVLKFDETK 591
G LC WQ + +QRL Q+ L E+K
Sbjct: 670 GILCFLPGWQEIKGVQQRL---QEALGMHESK 698
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 206 (77.6 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 314
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL 460
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
Score = 188 (71.2 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 440 RDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSV 499
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
L VG+ + SK + ++F T G+LL +++ L + + +I
Sbjct: 500 AQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSH--VI 557
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+DEVHER V +D LR+VLMSAT D ++ YF
Sbjct: 558 VDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 603
Score = 42 (19.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 560 GNLCAFQFWQHVFKDKQRLDHLQQVLKFDETK 591
G LC WQ + +QRL Q+ L E+K
Sbjct: 670 GILCFLPGWQEIKGVQQRL---QEALGMHESK 698
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 241 (89.9 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 60/183 (32%), Positives = 93/183 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ L+E++++ V +N++ +++GETG GK++Q+ Q+L I CTQPRR
Sbjct: 557 IYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSV 616
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
C LG EVGY I S + I + T G+LL E + D L +Y +I+L
Sbjct: 617 AKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLG--QYAIIML 674
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGERV 197
DE HER++ +D D+++++ SAT D K+ YF + GR V
Sbjct: 675 DEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPV 734
Query: 198 EVL 200
EVL
Sbjct: 735 EVL 737
Score = 158 (60.7 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 254 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 307
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 741 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 798
Query: 308 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 363
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 799 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 858
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 400
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 859 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 895
Score = 43 (20.2 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 569 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 616
Q+VF KDKQ L Q+ KF + + +LL K WC +++ SL
Sbjct: 1005 QNVFYRPKDKQALAD-QKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1063
Query: 617 HVSELYEDILNAVHRFR 633
++ + +L + R +
Sbjct: 1064 RAQDIRKQMLGIMDRHK 1080
Score = 38 (18.4 bits), Expect = 5.5e-26, Sum P(3) = 5.5e-26
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 594 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 645
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1128 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1177
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 206 (77.6 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 314
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 677 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 734
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 735 DQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 794
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 795 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 854
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL 460
A+ L KA+D P + V +A+ LL
Sbjct: 855 AVE----FLSKAVDSPNIKAVDEAVILL 878
Score = 188 (71.2 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 463 RDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSV 522
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
L VG+ + SK + ++F T G+LL +++ L + + +I
Sbjct: 523 AQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSH--VI 580
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+DEVHER V +D LR+VLMSAT D ++ YF
Sbjct: 581 VDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 626
Score = 42 (19.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 560 GNLCAFQFWQHVFKDKQRLDHLQQVLKFDETK 591
G LC WQ + +QRL Q+ L E+K
Sbjct: 693 GILCFLPGWQEIKGVQQRL---QEALGMHESK 721
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 206 (77.6 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 314
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 682 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 739
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 740 DQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 799
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 800 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 859
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL 460
A+ L KA+D P + V +A+ LL
Sbjct: 860 AVE----FLSKAVDSPNIKAVDEAVILL 883
Score = 188 (71.2 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 468 RDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSV 527
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
L VG+ + SK + ++F T G+LL +++ L + + +I
Sbjct: 528 AQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSH--VI 585
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+DEVHER V +D LR+VLMSAT D ++ YF
Sbjct: 586 VDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 631
Score = 42 (19.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 560 GNLCAFQFWQHVFKDKQRLDHLQQVLKFDETK 591
G LC WQ + +QRL Q+ L E+K
Sbjct: 698 GILCFLPGWQEIKGVQQRL---QEALGMHESK 726
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 241 (89.9 bits), Expect = 2.6e-26, Sum P(3) = 2.6e-26
Identities = 75/278 (26%), Positives = 130/278 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME---PILCTQPRRFXXXXX 84
+ +L++ ++E +++N++ ++VGETG GK++Q+ Q+ + + I CTQPRR
Sbjct: 542 IFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSV 601
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
C+LG +VGY I S+ + I + T G+LL E + D L+ Y +I+L
Sbjct: 602 AKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSG--YSLIML 659
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIP 203
DE HER++ +D +L++++ SAT D K+ +YF + + IP
Sbjct: 660 DEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLE------APIFTIP 713
Query: 204 STNQRTIFQRRVSYL-EQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIH 262
RT F + Y E ++ L H +T + + P + + E+
Sbjct: 714 G---RT-FPVEILYTREPESDYLEAAH-IT--VMQIHLTEPPGDVLVFLTGQEEIDTSCE 766
Query: 263 DLVLHIHKNESDIEKSILVFLPTYYAL--EQQWHLMKP 298
L + D+ + L+ LP Y AL E Q + P
Sbjct: 767 VLYERMKSMGPDVPE--LIILPVYGALPSEMQTRIFDP 802
Score = 154 (59.3 bits), Expect = 2.6e-26, Sum P(3) = 2.6e-26
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV++ATNIAE+S+TI + YV+D Q ++ +DS + +SQ+ A+QR GR G
Sbjct: 808 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAG 867
Query: 388 RTCDGQVYRLVTKSFF 403
RT G+ YRL T+ F
Sbjct: 868 RTGPGKCYRLYTERAF 883
Score = 45 (20.9 bits), Expect = 2.6e-26, Sum P(3) = 2.6e-26
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 601 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKF--LGTSNGLPTY 646
+ EW H LV ++ ++ E+ + F P F +G S L T+
Sbjct: 1120 QPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTF 1167
Score = 39 (18.8 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 15/76 (19%), Positives = 35/76 (46%)
Query: 569 QHVF-KDKQRLDHL-QQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLHH 617
Q++F + K++ DH Q+ KF + + +LL + WC +++ S+
Sbjct: 990 QNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKR 1049
Query: 618 VSELYEDILNAVHRFR 633
++ + +L + R +
Sbjct: 1050 AQDIRKQLLGIMDRHK 1065
Score = 39 (18.8 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 185 RDYFRDLGRGER 196
RD RD GRG+R
Sbjct: 196 RDRDRDRGRGDR 207
Score = 38 (18.4 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 945 KFAQLQVEKLARDSFFFLSESFPFDEMSFGELSDTVNTKRPMLVSRAISYVFDLHPPTD 1003
K +L E+ RD P E+ L+ T+ + M ++ I + F PP D
Sbjct: 873 KCYRLYTERAFRDEML----PTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLD 927
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 241 (89.9 bits), Expect = 2.6e-26, Sum P(3) = 2.6e-26
Identities = 75/278 (26%), Positives = 130/278 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME---PILCTQPRRFXXXXX 84
+ +L++ ++E +++N++ ++VGETG GK++Q+ Q+ + + I CTQPRR
Sbjct: 542 IFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSV 601
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
C+LG +VGY I S+ + I + T G+LL E + D L+ Y +I+L
Sbjct: 602 AKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSG--YSLIML 659
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIP 203
DE HER++ +D +L++++ SAT D K+ +YF + + IP
Sbjct: 660 DEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLE------APIFTIP 713
Query: 204 STNQRTIFQRRVSYL-EQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIH 262
RT F + Y E ++ L H +T + + P + + E+
Sbjct: 714 G---RT-FPVEILYTREPESDYLEAAH-IT--VMQIHLTEPPGDVLVFLTGQEEIDTSCE 766
Query: 263 DLVLHIHKNESDIEKSILVFLPTYYAL--EQQWHLMKP 298
L + D+ + L+ LP Y AL E Q + P
Sbjct: 767 VLYERMKSMGPDVPE--LIILPVYGALPSEMQTRIFDP 802
Score = 154 (59.3 bits), Expect = 2.6e-26, Sum P(3) = 2.6e-26
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV++ATNIAE+S+TI + YV+D Q ++ +DS + +SQ+ A+QR GR G
Sbjct: 808 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAG 867
Query: 388 RTCDGQVYRLVTKSFF 403
RT G+ YRL T+ F
Sbjct: 868 RTGPGKCYRLYTERAF 883
Score = 45 (20.9 bits), Expect = 2.6e-26, Sum P(3) = 2.6e-26
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 601 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKF--LGTSNGLPTY 646
+ EW H LV ++ ++ E+ + F P F +G S L T+
Sbjct: 1120 QPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTF 1167
Score = 39 (18.8 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 15/76 (19%), Positives = 35/76 (46%)
Query: 569 QHVF-KDKQRLDHL-QQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLHH 617
Q++F + K++ DH Q+ KF + + +LL + WC +++ S+
Sbjct: 990 QNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKR 1049
Query: 618 VSELYEDILNAVHRFR 633
++ + +L + R +
Sbjct: 1050 AQDIRKQLLGIMDRHK 1065
Score = 39 (18.8 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 185 RDYFRDLGRGER 196
RD RD GRG+R
Sbjct: 196 RDRDRDRGRGDR 207
Score = 38 (18.4 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 945 KFAQLQVEKLARDSFFFLSESFPFDEMSFGELSDTVNTKRPMLVSRAISYVFDLHPPTD 1003
K +L E+ RD P E+ L+ T+ + M ++ I + F PP D
Sbjct: 873 KCYRLYTERAFRDEML----PTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLD 927
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 236 (88.1 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 53/165 (32%), Positives = 88/165 (53%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRFXXXXXXX 86
+ +I+ + N VT+++GETG GKS+Q+PQF+L + + I TQPRR
Sbjct: 87 KREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQPRRVAAINLAT 146
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEV 146
C+LG +VGY + + R+++ + T G+LL E+ + +Y VI++DE
Sbjct: 147 RVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNS-DLREYSVIVIDEA 205
Query: 147 HERSVESDXXXXXXXXXXXXXN-DLRVVLMSATADITKYRDYFRD 190
HER+V +D DLR+++MSAT K+ ++F +
Sbjct: 206 HERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNN 250
Score = 149 (57.5 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 52/167 (31%), Positives = 87/167 (52%)
Query: 261 IHDLVLH--IHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK----VHI-----LH 309
I D V+ I N+ + IL FLP +++ +M+ ++ + V + L+
Sbjct: 275 IVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLY 334
Query: 310 SSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS-CRSLQVFWDVNRKID 367
+++ +Q+L+ I RKV+ +TNIAE+SVTI V +V+DS R ++V W +
Sbjct: 335 AALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKV-WRHQLGLA 393
Query: 368 SAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 414
+ V +SQ+ A QR GR GR +G+ +RL +S + L P I
Sbjct: 394 TLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYVKLPKQSEPEI 440
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 204 (76.9 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 66/208 (31%), Positives = 99/208 (47%)
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 314
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 315 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
+Q + + RK++LATNIAE+S TI + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 432
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLL 460
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
Score = 188 (71.2 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R+ I+ + ++ V +I G+TGCGK++++PQ LL + ++ TQPRR
Sbjct: 440 RDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSV 499
Query: 85 XXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDR-GLNALKYKVII 142
L VG+ + SK + ++F T G+LL +++ L + + +I
Sbjct: 500 AQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSH--VI 557
Query: 143 LDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+DEVHER V +D LR+VLMSAT D ++ YF
Sbjct: 558 VDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 603
Score = 42 (19.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 560 GNLCAFQFWQHVFKDKQRLDHLQQVLKFDETK 591
G LC WQ + +QRL Q+ L E+K
Sbjct: 670 GILCFLPGWQEIKGVQQRL---QEALGMHESK 698
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 207 (77.9 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 66/196 (33%), Positives = 97/196 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL----AENMEPILCTQPRRFXXXX 83
++S + I+E V E+ + +I GETG GK++QVPQFL + + I T+PRR
Sbjct: 252 ILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGVTEPRRVAAVA 311
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
N V Y I + +++E ++I F T GVLL E++ L LKYKV+I+
Sbjct: 312 MSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL-LLKYKVVII 369
Query: 144 DEVHERSVESDXXXXXXXXXXXXXND----LRVVLMSATA---DITKYRDYFRDLGRGER 196
DE HERSV +D L++++MSAT D T+ + F +
Sbjct: 370 DEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQNQRLFTQPPPVIK 429
Query: 197 VEVLAIPST---NQRT 209
VE P T N+RT
Sbjct: 430 VESRQFPVTVHFNKRT 445
Score = 183 (69.5 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 55/166 (33%), Positives = 84/166 (50%)
Query: 305 VHIL--HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 361
+H+L +S + E QA + + R ++ATN+AE+S+TIP + YV+D + + +D
Sbjct: 586 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 645
Query: 362 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXX 421
+ S + WVSQ+ A+QR GR GRT G YRL + + FG E + P I
Sbjct: 646 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEKYPPPEITRRPVED 705
Query: 422 XXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ 467
+ KA++ KV+ PP E + A +LL ALQ
Sbjct: 706 LIL-----QMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQ 746
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 211 (79.3 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 69/242 (28%), Positives = 111/242 (45%)
Query: 30 SLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXXXX 86
++RE ++ + +N+V ++VGETG GK++Q+ QFL + I CTQPRR
Sbjct: 192 AVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAKFGMIGCTQPRRVAAMSVAK 251
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIILDE 145
+LG VGY I + I + T GVLL E + L+ KY II+DE
Sbjct: 252 RVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLRESLVQTDLD--KYSCIIMDE 309
Query: 146 VHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIPST 205
HER++ +D DL++++ SAT + ++ +F G E + T
Sbjct: 310 AHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERFSRFF-----GGAPEFIIPGRT 364
Query: 206 NQRTI-FQRRV--SYLEQ-VTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLI 261
+ F R Y++ V ++L + H L + +G A E+ E KL+
Sbjct: 365 FPVDVHFSRTPCEDYVDSAVKQVLAI-HVSQGPGDILVFMTGQEDIEATCELVDERLKLL 423
Query: 262 HD 263
+D
Sbjct: 424 ND 425
Score = 175 (66.7 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 59/201 (29%), Positives = 97/201 (48%)
Query: 264 LVLHIHKNESDIEKSILVFLPTYYALEQQWHL----MKPLSSFFKVHIL--HSSVDTEQ- 316
L +H+ + DI LVF+ +E L +K L+ K+ IL +S + EQ
Sbjct: 388 LAIHVSQGPGDI----LVFMTGQEDIEATCELVDERLKLLNDPPKLSILPIYSQMPAEQQ 443
Query: 317 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
A + + RKVI+ATNIAE+S+T+ + +V+DS S ++ +D+ ++ +SQ
Sbjct: 444 AKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQ 503
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 436
+ A QR GR GRT G+ YRL T+ + + I + +S + D
Sbjct: 504 ANANQRSGRAGRTGPGKAYRLYTEVAYKN--EMYLQTIPEIQRTSLSNTVLLLKSLGVKD 561
Query: 437 PKVLLQKALDPPYPEVVGDAL 457
+L +DPP E + +L
Sbjct: 562 --LLDFDFMDPPPQETISTSL 580
Score = 48 (22.0 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 602 EEWCSLHYLVQSSLHHVSELYEDILNAV 629
+ WC+ H+L +L E+ D LN +
Sbjct: 682 DHWCTKHFLHAKTLRRAKEV-RDQLNDI 708
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 203 (76.5 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 64/196 (32%), Positives = 98/196 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLA---ENMEPIL-CTQPRRFXXXX 83
+++ + I+E V E+ + ++ GETG GK++QVPQFL + + I+ T+PRR
Sbjct: 250 ILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGVTEPRRVAAVA 309
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
N V Y I + +++E ++I F T GVLL E++ L LKYKV+I+
Sbjct: 310 MSQRVAKEMNLS-HRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL-LLKYKVVII 367
Query: 144 DEVHERSVESDXXXXXXXXXXXXXND----LRVVLMSATA---DITKYRDYFRDLGRGER 196
DE HERSV +D L++++MSAT D T+ + F +
Sbjct: 368 DEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQRLFTTPPPVIK 427
Query: 197 VEVLAIPST---NQRT 209
VE P T N+RT
Sbjct: 428 VESRQFPVTVHFNKRT 443
Score = 185 (70.2 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 49/140 (35%), Positives = 72/140 (51%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
R ++ATN+AE+S+TIP + YV+D + + ++D + S + WVSQ+ A+QR GR G
Sbjct: 607 RLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAG 666
Query: 388 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 447
RT G YRL + + FG E P I + KA++ KV+ P
Sbjct: 667 RTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLIL-----QMKALNIEKVINFPFPTP 721
Query: 448 PYPEVVGDALDLLDHKRALQ 467
P E + A +LL ALQ
Sbjct: 722 PSVEALIAAEELLIALGALQ 741
Score = 39 (18.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 964 ESFPFDEMSFGELSDTVNTKRPMLVSRAISYVFDLHPPT 1002
E FP E++ + D + + + + + I++ F PP+
Sbjct: 686 EQFPPPEITRRPVEDLILQMKALNIEKVINFPFPT-PPS 723
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 199 (75.1 bits), Expect = 7.6e-26, Sum P(4) = 7.6e-26
Identities = 49/132 (37%), Positives = 75/132 (56%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL----LAENMEPILCTQPRRFXXXX 83
+ S+ +++VE+V +N + +IVGETG GK++Q+PQFL + I TQPRR
Sbjct: 43 IASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVT 102
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVII 142
+LG +VGY I S +++ + T G+LL E + D L+ +Y VII
Sbjct: 103 VAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLS--RYSVII 160
Query: 143 LDEVHERSVESD 154
+DE H+RSV +D
Sbjct: 161 VDEAHDRSVHTD 172
Score = 166 (63.5 bits), Expect = 7.6e-26, Sum P(4) = 7.6e-26
Identities = 42/108 (38%), Positives = 63/108 (58%)
Query: 308 LHSSVDTEQALMAMKICKS-HRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 366
+ S++ +EQ + + RKVILATNIAE+S+TIP + YVID +D ++ +
Sbjct: 330 IFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGM 389
Query: 367 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 414
+S ++V S++Q QR GR GR G+ +RL + F LED P I
Sbjct: 390 ESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEI 437
Score = 62 (26.9 bits), Expect = 7.6e-26, Sum P(4) = 7.6e-26
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 597 LPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHR 631
+ KI ++WC +Y+ SL H ++Y I V +
Sbjct: 586 IDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQ 620
Score = 44 (20.5 bits), Expect = 7.6e-26, Sum P(4) = 7.6e-26
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 170 LRVVLMSATADITKYRDYF 188
L++++MSA+ D + +YF
Sbjct: 229 LKLIIMSASLDARVFSEYF 247
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 201 (75.8 bits), Expect = 8.5e-26, Sum P(2) = 8.5e-26
Identities = 65/196 (33%), Positives = 97/196 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM---EPIL-CTQPRRFXXXX 83
++S + I+E V E+ + ++ GETG GK++QVPQFL + I+ T+PRR
Sbjct: 41 ILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTEPRRVAAVA 100
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
N V Y I + +++E ++I F T GVLL E++ L L+YKV+I+
Sbjct: 101 MSQRVAKEMNLSQR-VVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL-LLRYKVVII 158
Query: 144 DEVHERSVESDXXXXXXX---XXXXXXN-DLRVVLMSATA---DITKYRDYFRDLGRGER 196
DE HERSV +D N L++++MSAT D T+ F +
Sbjct: 159 DEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPVIK 218
Query: 197 VEVLAIPST---NQRT 209
VE P T N+RT
Sbjct: 219 VESRQFPVTVHFNKRT 234
Score = 184 (69.8 bits), Expect = 8.5e-26, Sum P(2) = 8.5e-26
Identities = 49/140 (35%), Positives = 72/140 (51%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
R ++ATN+AE+S+TIP + YV+D + + ++D + S + WVSQ+ A+QR GR G
Sbjct: 401 RLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAG 460
Query: 388 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 447
RT G YRL + + FG E P I + KA++ KV+ P
Sbjct: 461 RTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLIL-----QMKALNVEKVINFPFPTP 515
Query: 448 PYPEVVGDALDLLDHKRALQ 467
P E + A +LL ALQ
Sbjct: 516 PSVEALLAAEELLIALGALQ 535
Score = 40 (19.1 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 964 ESFPFDEMSFGELSDTVNTKRPMLVSRAISYVFDLHPPT 1002
E FP E++ + D + + + V + I++ F PP+
Sbjct: 480 EQFPPPEITRRPVEDLILQMKALNVEKVINFPFPT-PPS 517
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 228 (85.3 bits), Expect = 9.4e-26, Sum P(3) = 9.4e-26
Identities = 53/165 (32%), Positives = 87/165 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ +++++++ + +N + ++VGETG GK++Q+ Q+L + I CTQPRR
Sbjct: 73 IFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSV 132
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
LG EVGY I SE + I + T G+LL E +R+ L+ Y II+
Sbjct: 133 AKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLD--HYSAIIM 190
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ +D +DL++++ SAT D K+ +F
Sbjct: 191 DEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFF 235
Score = 162 (62.1 bits), Expect = 9.4e-26, Sum P(3) = 9.4e-26
Identities = 66/199 (33%), Positives = 101/199 (50%)
Query: 266 LHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL--HSSVDTE-QAL 318
L +H S IL+F+P +E Q ++ L + + +L +S + ++ QA
Sbjct: 271 LQVHL--SGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAK 328
Query: 319 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWV 374
+ K RK I+ATNIAE+S+T+ + +VIDS C+ L+VF N +I D+ ++ +
Sbjct: 329 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK-LKVF---NPRIGMDALQIYPI 384
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKA 433
SQ+ A QR GR GRT GQ +RL T+S + L P I + +S
Sbjct: 385 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANV---VLLLKSLG 441
Query: 434 ISDPKVLLQ-KALDPPYPE 451
+ D LLQ +DPP PE
Sbjct: 442 VQD---LLQFHFMDPP-PE 456
Score = 37 (18.1 bits), Expect = 9.4e-26, Sum P(3) = 9.4e-26
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 604 WCSLHYLVQSSLHHVSEL 621
WC+ H++ ++ V E+
Sbjct: 566 WCNDHFIHAKAMRKVREV 583
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 339 (124.4 bits), Expect = 9.9e-26, Sum P(2) = 9.9e-26
Identities = 119/424 (28%), Positives = 190/424 (44%)
Query: 71 ILCTQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMR 129
I+ TQPRR R E G GY + L + I+F T GVLL ++
Sbjct: 443 IVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 501
Query: 130 DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFR 189
+ G+ + + +I+DE+HER + +D ++R+VLMSAT D T + +YF
Sbjct: 502 EAGIRGISH--VIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFF 559
Query: 190 DL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCS- 242
+ GR V+ + Q T F ++ + D G + + C
Sbjct: 560 NCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDK--EDDGGEDDDANCNLICGD 617
Query: 243 --GPSPSMANAEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHLMK 297
GP ++ +++ K +LI L+ +I ++ ++LVFLP + + Q HL
Sbjct: 618 EYGPETKLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEN 675
Query: 298 PL---SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSC 353
S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC
Sbjct: 676 NSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSC 735
Query: 354 RSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPA 413
+ + + + + VW S++ EQR+GR GR G + L +++ F LE H P
Sbjct: 736 KQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPE 795
Query: 414 IXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKIS 470
+ I I L KA++PP + V +A L LD A +++
Sbjct: 796 MFRTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELT 852
Query: 471 PRGR 474
P GR
Sbjct: 853 PLGR 856
Score = 234 (87.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 84/312 (26%), Positives = 143/312 (45%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
V +I+E + +N V +I G TGCGK++QVPQ++L + ++ I+ TQPRR
Sbjct: 393 VKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRIS 452
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYK 139
R E G GY + L + I+F T GVLL ++ + G+ + +
Sbjct: 453 AVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-EAGIRGISH- 510
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
+I+DE+HER + +D ++R+VLMSAT D T + +YF + GR
Sbjct: 511 -VIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGR 569
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCS---GPSPSMAN 250
V+ + Q T F ++ + D G + + C GP ++
Sbjct: 570 TFPVQEYFLEDCIQMTQFIPPPKDKKKKDK--EDDGGEDDDANCNLICGDEYGPETKLSM 627
Query: 251 AEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHLMKPL---SSFFK 304
+++ K +LI L+ +I ++ ++LVFLP + + Q HL S ++
Sbjct: 628 SQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLENNSHFGSHRYQ 685
Query: 305 VHILHSSVDTEQ 316
+ LHS + E+
Sbjct: 686 ILPLHSQIPREE 697
Score = 222 (83.2 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 75/253 (29%), Positives = 118/253 (46%)
Query: 243 GPSPSMANAEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHLMKPL 299
GP ++ +++ K +LI L+ +I ++ ++LVFLP + + Q HL
Sbjct: 620 GPETKLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLENNS 677
Query: 300 ---SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 355
S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+
Sbjct: 678 HFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQ 737
Query: 356 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIX 415
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 738 KVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMF 797
Query: 416 XXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPR 472
I I L KA++PP + V +A L LD A +++P
Sbjct: 798 RTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 854
Query: 473 GRY------EPTF 479
GR EP F
Sbjct: 855 GRILAKLPIEPRF 867
Score = 43 (20.2 bits), Expect = 9.9e-26, Sum P(2) = 9.9e-26
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 782 CIFSHDLGQPVLPSSSFTCLPEDGVANAASL 812
CIF +G V S+ TC PE ++ L
Sbjct: 875 CIFY--VGDAVCTISAATCFPEPFISEGKRL 903
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 344 (126.2 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 122/424 (28%), Positives = 190/424 (44%)
Query: 71 ILCTQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMR 129
I+ TQPRR R E G GY + L + I+F T GVLL ++
Sbjct: 440 IVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 498
Query: 130 DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFR 189
+ G+ + + +I+DE+HER + +D ++R+VLMSAT D + + +YF
Sbjct: 499 EAGIRGISH--VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFF 556
Query: 190 DL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCS- 242
+ GR V+ + Q T F ++ + D G + + C
Sbjct: 557 NCPIIEVYGRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDK--DDDGGEDDDANCNLICGD 614
Query: 243 --GPSP--SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-M 296
GP SM+ K +LI L+ +I ++ ++LVFLP + + Q HL M
Sbjct: 615 EYGPETRLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEM 672
Query: 297 KPL--SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSC 353
P S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC
Sbjct: 673 NPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSC 732
Query: 354 RSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPA 413
+ + + + + VW S++ EQR+GR GR G + L +++ F LE H P
Sbjct: 733 KQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPE 792
Query: 414 IXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKIS 470
+ I I L KA++PP + V +A L LD A +++
Sbjct: 793 MFRTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELT 849
Query: 471 PRGR 474
P GR
Sbjct: 850 PLGR 853
Score = 245 (91.3 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 88/312 (28%), Positives = 143/312 (45%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
V +I+E + +N V +I G TGCGK++QVPQF+L + ++ I+ TQPRR
Sbjct: 390 VKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRIS 449
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYK 139
R E G GY + L + I+F T GVLL ++ + G+ + +
Sbjct: 450 AVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-EAGIRGISH- 507
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
+I+DE+HER + +D ++R+VLMSAT D + + +YF + GR
Sbjct: 508 -VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGR 566
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCS---GPSP--SM 248
V+ + Q T F ++ + D G + + C GP SM
Sbjct: 567 TYPVQEYFLEDCIQMTHFVPPPKDKKKKDK--DDDGGEDDDANCNLICGDEYGPETRLSM 624
Query: 249 ANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL--SSFFK 304
+ K +LI L+ +I ++ ++LVFLP + + Q HL M P S ++
Sbjct: 625 SQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQ 682
Query: 305 VHILHSSVDTEQ 316
+ LHS + E+
Sbjct: 683 ILPLHSQIPREE 694
Score = 228 (85.3 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 79/253 (31%), Positives = 118/253 (46%)
Query: 243 GPSP--SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKP 298
GP SM+ K +LI L+ +I ++ ++LVFLP + + Q HL M P
Sbjct: 617 GPETRLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNP 674
Query: 299 L--SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 355
S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+
Sbjct: 675 HFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQ 734
Query: 356 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIX 415
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 735 KVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMF 794
Query: 416 XXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPR 472
I I L KA++PP + V +A L LD A +++P
Sbjct: 795 RTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 851
Query: 473 GRY------EPTF 479
GR EP F
Sbjct: 852 GRILAKLPIEPRF 864
Score = 38 (18.4 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 820 SDGSILLLDD 829
SDG I+L+DD
Sbjct: 1077 SDGQIVLVDD 1086
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 344 (126.2 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 122/424 (28%), Positives = 190/424 (44%)
Query: 71 ILCTQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMR 129
I+ TQPRR R E G GY + L + I+F T GVLL ++
Sbjct: 440 IVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 498
Query: 130 DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFR 189
+ G+ + + +I+DE+HER + +D ++R+VLMSAT D + + +YF
Sbjct: 499 EAGIRGISH--VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFF 556
Query: 190 DL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCS- 242
+ GR V+ + Q T F ++ + D G + + C
Sbjct: 557 NCPIIEVYGRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDK--DDDGGEDDDANCNLICGD 614
Query: 243 --GPSP--SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-M 296
GP SM+ K +LI L+ +I ++ ++LVFLP + + Q HL M
Sbjct: 615 EYGPETRLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEM 672
Query: 297 KPL--SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSC 353
P S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC
Sbjct: 673 NPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSC 732
Query: 354 RSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPA 413
+ + + + + VW S++ EQR+GR GR G + L +++ F LE H P
Sbjct: 733 KQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPE 792
Query: 414 IXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKIS 470
+ I I L KA++PP + V +A L LD A +++
Sbjct: 793 MFRTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELT 849
Query: 471 PRGR 474
P GR
Sbjct: 850 PLGR 853
Score = 245 (91.3 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 88/312 (28%), Positives = 143/312 (45%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
V +I+E + +N V +I G TGCGK++QVPQF+L + ++ I+ TQPRR
Sbjct: 390 VKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRIS 449
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYK 139
R E G GY + L + I+F T GVLL ++ + G+ + +
Sbjct: 450 AVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-EAGIRGISH- 507
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
+I+DE+HER + +D ++R+VLMSAT D + + +YF + GR
Sbjct: 508 -VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGR 566
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCS---GPSP--SM 248
V+ + Q T F ++ + D G + + C GP SM
Sbjct: 567 TYPVQEYFLEDCIQMTHFVPPPKDKKKKDK--DDDGGEDDDANCNLICGDEYGPETRLSM 624
Query: 249 ANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL--SSFFK 304
+ K +LI L+ +I ++ ++LVFLP + + Q HL M P S ++
Sbjct: 625 SQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQ 682
Query: 305 VHILHSSVDTEQ 316
+ LHS + E+
Sbjct: 683 ILPLHSQIPREE 694
Score = 228 (85.3 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 79/253 (31%), Positives = 118/253 (46%)
Query: 243 GPSP--SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKP 298
GP SM+ K +LI L+ +I ++ ++LVFLP + + Q HL M P
Sbjct: 617 GPETRLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNP 674
Query: 299 L--SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 355
S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+
Sbjct: 675 HFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQ 734
Query: 356 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIX 415
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 735 KVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMF 794
Query: 416 XXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPR 472
I I L KA++PP + V +A L LD A +++P
Sbjct: 795 RTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 851
Query: 473 GRY------EPTF 479
GR EP F
Sbjct: 852 GRILAKLPIEPRF 864
Score = 38 (18.4 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 820 SDGSILLLDD 829
SDG I+L+DD
Sbjct: 1077 SDGQIVLVDD 1086
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 207 (77.9 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 53/170 (31%), Positives = 86/170 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM--EPILC-TQPRRFXXXXX 84
+ R ++ ++ +++GETG GK++Q+PQ+L + + I+ TQPRR
Sbjct: 26 IFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRRVAAISL 85
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
+ ELG VGY + S+ ++I F T G+LL E + D L KY V+IL
Sbjct: 86 ATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILR--KYSVVIL 143
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDL-----RVVLMSATADITKYRDYF 188
DE HER++ +D +L +V++MSAT D+ ++ YF
Sbjct: 144 DEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYF 193
Score = 171 (65.3 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 63/229 (27%), Positives = 103/229 (44%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTEQA 317
V IH+ E+ + ILVFL +E + ++ V L++S+ Q
Sbjct: 228 VFQIHQ-EAPSSQDILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQ 286
Query: 318 LMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
L + K RKVIL+TNIAE+S+TI + YV+D+ ++ ++ + VS+
Sbjct: 287 LRVFQAAPKGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSK 346
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 436
+QA QR GR GR G YRL T+ F + P I + + A+
Sbjct: 347 AQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLL--QLLALRI 404
Query: 437 PKVLLQKALDPPYPEVVGDALDLLDHKRALQK------ISPRGRYEPTF 479
P +L + P P+ + A++ LD A+++ ++P GR F
Sbjct: 405 PNILTFDFMSKPSPDAIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAF 453
Score = 40 (19.1 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 233 SELSSLRYCSGPSPSMANAEIKPE-VHKLI--HDLVLHIH 269
S+ +++R C S M AE++P+ + + H LV IH
Sbjct: 568 SDTANIRRCLAHSLFMNAAELQPDGTYSTVNSHQLVA-IH 606
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 201 (75.8 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 65/196 (33%), Positives = 97/196 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM---EPIL-CTQPRRFXXXX 83
++S + I+E V E+ + ++ GETG GK++QVPQFL + I+ T+PRR
Sbjct: 254 ILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTEPRRVAAVA 313
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
N V Y I + +++E ++I F T GVLL E++ L L+YKV+I+
Sbjct: 314 MSQRVAKEMNLSQR-VVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL-LLRYKVVII 371
Query: 144 DEVHERSVESDXXXXXXX---XXXXXXN-DLRVVLMSATA---DITKYRDYFRDLGRGER 196
DE HERSV +D N L++++MSAT D T+ F +
Sbjct: 372 DEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPVIK 431
Query: 197 VEVLAIPST---NQRT 209
VE P T N+RT
Sbjct: 432 VESRQFPVTVHFNKRT 447
Score = 184 (69.8 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 49/140 (35%), Positives = 72/140 (51%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
R ++ATN+AE+S+TIP + YV+D + + ++D + S + WVSQ+ A+QR GR G
Sbjct: 614 RLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAG 673
Query: 388 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 447
RT G YRL + + FG E P I + KA++ KV+ P
Sbjct: 674 RTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLIL-----QMKALNVEKVINFPFPTP 728
Query: 448 PYPEVVGDALDLLDHKRALQ 467
P E + A +LL ALQ
Sbjct: 729 PSVEALLAAEELLIALGALQ 748
Score = 40 (19.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 964 ESFPFDEMSFGELSDTVNTKRPMLVSRAISYVFDLHPPT 1002
E FP E++ + D + + + V + I++ F PP+
Sbjct: 693 EQFPPPEITRRPVEDLILQMKALNVEKVINFPFPT-PPS 730
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 201 (75.8 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 67/229 (29%), Positives = 113/229 (49%)
Query: 262 HDLVLHIHK---NESD--IEKSILVFLPTYYALEQQWHLMKPLSSF-----FKVHILHSS 311
+ L++++ K E D K +LVFLP + + L++ + F F +++LHS+
Sbjct: 884 YGLIVYLLKYIFTEGDPKFSKCVLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHST 943
Query: 312 VDTEQALMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAE 370
+ + Q I K RK++L+TNIAE+ VTIP V VID+ ++ ++ R +
Sbjct: 944 LSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLT 1003
Query: 371 LVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCA 429
+VS++ A+QR GR GR +G Y L +K T ++ P I +
Sbjct: 1004 DTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMC 1063
Query: 430 ESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL---QKISPRGRY 475
+ + D +L KALDPP + AL+ L AL +K++ G++
Sbjct: 1064 QMGDVQD---VLGKALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKF 1109
Score = 186 (70.5 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 61/211 (28%), Positives = 95/211 (45%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-----PILCTQPRRFXXXXXXX 86
RE I++ V +++ +I G+TGCGKS+Q+P FLL + + I T+PRR
Sbjct: 637 RETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENSTKNGKAVKIYVTEPRRISAISLAN 696
Query: 87 XXXXGRNCELGGE---------VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALK 137
ELGG VGY + + + + + T G L + + G
Sbjct: 697 RVSQ----ELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFL-RLLEVGNEIES 751
Query: 138 YKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERV 197
+I+DEVHERS++SD L++++MSAT + K++ YF E
Sbjct: 752 VTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYF------EGS 805
Query: 198 EVLAIPSTNQRTIFQRRVSYLEQVTELLGVD 228
++ IP +T R YLE + G D
Sbjct: 806 NLITIPG---KTYPVHRF-YLEDILSQFGND 832
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 344 (126.2 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 130/429 (30%), Positives = 195/429 (45%)
Query: 71 ILCTQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMR 129
I+ TQPRR R E+G GY + L + ++F T GVLL ++
Sbjct: 442 IVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKL- 500
Query: 130 DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFR 189
+ G+ + + +I+DE+HER + +D ++RV+LMSAT D + + +YF
Sbjct: 501 ESGIRGISH--VIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFF 558
Query: 190 D------LGRGERVEVLAIPSTNQRTIF--QRRVSYLEQVTELLGVDHGMTSELSSLRYC 241
+ GR V+ + Q T F R + E G D L C
Sbjct: 559 NCPIIEVFGRTFPVQEYYLEDCIQMTQFIPPPRDKKKKDKDEEGGDDEETNCNL----VC 614
Query: 242 S---GPSP--SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQW 293
GP SM+ K +LI L+ +I ++ ++LVFLP + YA+++
Sbjct: 615 GDDYGPETRRSMSQLSEKETPLELIEALLKYIET--LNVPGAVLVFLPGWNLIYAMQK-- 670
Query: 294 HL-MKPL--SSFFKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYV 349
HL M P S + + LHS + EQ + + KVIL+TNIAE+S+TI V YV
Sbjct: 671 HLEMNPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYV 730
Query: 350 IDSCRS-LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLED 408
IDSC+ +++F N + A VW S++ EQR+GR GR G + L +K+ F LE
Sbjct: 731 IDSCKQKVKLFTSHNNMTNYAT-VWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLET 789
Query: 409 HECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ- 467
H P I I I L KA++PP + V +A L AL
Sbjct: 790 HLTPEIFRTPLHEVALSIKLLRLGGIGH---FLSKAIEPPPLDAVIEAEHTLRELDALDS 846
Query: 468 --KISPRGR 474
+++P GR
Sbjct: 847 NDELTPLGR 855
Score = 231 (86.4 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 90/316 (28%), Positives = 143/316 (45%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
V E+I+ V + V +I G TGCGK++QVPQ++L E + I+ TQPRR
Sbjct: 392 VKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQPRRIS 451
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYK 139
R E+G GY + L + ++F T GVLL ++ + G+ + +
Sbjct: 452 AVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKL-ESGIRGISH- 509
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRD------LGR 193
+I+DE+HER + +D ++RV+LMSAT D + + +YF + GR
Sbjct: 510 -VIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIEVFGR 568
Query: 194 GERVEVLAIPSTNQRTIF--QRRVSYLEQVTELLGVDHGMTSELSSLRYCS---GPSP-- 246
V+ + Q T F R + E G D L C GP
Sbjct: 569 TFPVQEYYLEDCIQMTQFIPPPRDKKKKDKDEEGGDDEETNCNL----VCGDDYGPETRR 624
Query: 247 SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWHL-MKPL--S 300
SM+ K +LI L+ +I ++ ++LVFLP + YA+++ HL M P S
Sbjct: 625 SMSQLSEKETPLELIEALLKYIET--LNVPGAVLVFLPGWNLIYAMQK--HLEMNPHFGS 680
Query: 301 SFFKVHILHSSVDTEQ 316
+ + LHS + ++
Sbjct: 681 HSYCILPLHSQIPRDE 696
Score = 37 (18.1 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 21/106 (19%), Positives = 44/106 (41%)
Query: 782 CIFSHDLGQPVLPSSSFTCLPEDGVANAASLLRLFPTSSDGSILLLDDTDMHFSANLACL 841
CIF +G + S+ TC PE ++ L + + +D ++
Sbjct: 874 CIFY--VGDALCTISAATCFPEPFISEGRRLGYVHRNFAGNRF-----SDHVALLSVFQA 926
Query: 842 YDPSRIISTTCLSDSAICD---TSLAGIRILWGLCHSLKTVISEAG 884
+D +R+ +++ C+ ++A +R+ W LK ++ AG
Sbjct: 927 WDDARMGGED--AETRFCEHKRLNMATLRMTWEAKVQLKDILVNAG 970
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 338 (124.0 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 118/424 (27%), Positives = 190/424 (44%)
Query: 71 ILCTQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMR 129
I+ TQPRR R E G GY + L + I+F T GVLL ++
Sbjct: 442 IVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 500
Query: 130 DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFR 189
+ G+ + + +I+DE+HER + +D ++R+VLMSAT D T + +YF
Sbjct: 501 EAGIRGISH--VIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFF 558
Query: 190 DL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCS- 242
+ GR V+ + Q T F ++ + D G + + C
Sbjct: 559 NCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDK--EDDGGEDDDANCNLICGD 616
Query: 243 --GPSPSMANAEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHLMK 297
GP ++ +++ K +LI L+ +I ++ ++LVFLP + + Q HL
Sbjct: 617 EYGPETKLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEN 674
Query: 298 PL---SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSC 353
S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC
Sbjct: 675 NSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSC 734
Query: 354 RSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPA 413
+ + + + + VW S++ EQR+GR GR G + L +++ F LE H P
Sbjct: 735 KQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPE 794
Query: 414 IXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKIS 470
+ I I L KA++PP + + +A L LD A +++
Sbjct: 795 MFRTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAIIEAEHTLRELDALDANDELT 851
Query: 471 PRGR 474
P GR
Sbjct: 852 PLGR 855
Score = 232 (86.7 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 84/312 (26%), Positives = 142/312 (45%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
V +I+E + N V +I G TGCGK++QVPQ++L + ++ I+ TQPRR
Sbjct: 392 VKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRIS 451
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYK 139
R E G GY + L + I+F T GVLL ++ + G+ + +
Sbjct: 452 AVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-EAGIRGISH- 509
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
+I+DE+HER + +D ++R+VLMSAT D T + +YF + GR
Sbjct: 510 -VIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGR 568
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCS---GPSPSMAN 250
V+ + Q T F ++ + D G + + C GP ++
Sbjct: 569 TFPVQEYFLEDCIQMTQFIPPPKDKKKKDK--EDDGGEDDDANCNLICGDEYGPETKLSM 626
Query: 251 AEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHLMKPL---SSFFK 304
+++ K +LI L+ +I ++ ++LVFLP + + Q HL S ++
Sbjct: 627 SQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLENNSHFGSHRYQ 684
Query: 305 VHILHSSVDTEQ 316
+ LHS + E+
Sbjct: 685 ILPLHSQIPREE 696
Score = 221 (82.9 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 74/253 (29%), Positives = 118/253 (46%)
Query: 243 GPSPSMANAEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHLMKPL 299
GP ++ +++ K +LI L+ +I ++ ++LVFLP + + Q HL
Sbjct: 619 GPETKLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLENNS 676
Query: 300 ---SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 355
S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+
Sbjct: 677 HFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQ 736
Query: 356 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIX 415
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 737 KVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMF 796
Query: 416 XXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPR 472
I I L KA++PP + + +A L LD A +++P
Sbjct: 797 RTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAIIEAEHTLRELDALDANDELTPL 853
Query: 473 GRY------EPTF 479
GR EP F
Sbjct: 854 GRILAKLPIEPRF 866
Score = 43 (20.2 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 782 CIFSHDLGQPVLPSSSFTCLPEDGVANAASL 812
CIF +G V S+ TC PE ++ L
Sbjct: 874 CIFY--VGDAVCTISAATCFPEPFISEGKRL 902
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 346 (126.9 bits), Expect = 2.1e-25, Sum P(3) = 2.1e-25
Identities = 122/424 (28%), Positives = 192/424 (45%)
Query: 71 ILCTQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSER-SKIVFKTAGVLLDEMR 129
I+ TQPRR R E G GY + L + I+F T GVLL ++
Sbjct: 441 IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKL- 499
Query: 130 DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFR 189
+ G+ + + +I+DE+HER + +D ++R+VLMSAT D + + +YF
Sbjct: 500 EAGIRGISH--VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFF 557
Query: 190 DL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCS- 242
+ GR V+ + Q T F ++ + D G + + C
Sbjct: 558 NCPIIEVYGRTYPVQEYFLEDCIQMTHFIPPPKDKKKKDK--EDDGGEDDDANCNLICGD 615
Query: 243 --GPSPSMANAEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-M 296
GP M+ A++ K +LI L+ +I ++ ++LVFLP + + Q HL M
Sbjct: 616 EYGPETKMSMAQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEM 673
Query: 297 KPL--SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSC 353
P S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC
Sbjct: 674 NPDFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSC 733
Query: 354 RSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPA 413
+ + + + + VW S++ EQR+GR GR G + L +++ F LE H P
Sbjct: 734 KQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPE 793
Query: 414 IXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKIS 470
+ I I L KA++PP + V +A L LD A +++
Sbjct: 794 MFRTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELT 850
Query: 471 PRGR 474
P GR
Sbjct: 851 PLGR 854
Score = 246 (91.7 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 88/312 (28%), Positives = 145/312 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFX 80
V +I+E + +N V +I G TGCGK++QVPQF+L + ++ I+ TQPRR
Sbjct: 391 VKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRIS 450
Query: 81 XXXXXXXXXXGRNCELGGEVGYHIGHSKHLSER-SKIVFKTAGVLLDEMRDRGLNALKYK 139
R E G GY + L + I+F T GVLL ++ + G+ + +
Sbjct: 451 AVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKL-EAGIRGISH- 508
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GR 193
+I+DE+HER + +D ++R+VLMSAT D + + +YF + GR
Sbjct: 509 -VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGR 567
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCS---GPSPSMAN 250
V+ + Q T F ++ + D G + + C GP M+
Sbjct: 568 TYPVQEYFLEDCIQMTHFIPPPKDKKKKDK--EDDGGEDDDANCNLICGDEYGPETKMSM 625
Query: 251 AEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL--SSFFK 304
A++ K +LI L+ +I ++ ++LVFLP + + Q HL M P S ++
Sbjct: 626 AQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPDFGSHRYQ 683
Query: 305 VHILHSSVDTEQ 316
+ LHS + E+
Sbjct: 684 ILPLHSQIPREE 695
Score = 234 (87.4 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 79/253 (31%), Positives = 120/253 (47%)
Query: 243 GPSPSMANAEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKP 298
GP M+ A++ K +LI L+ +I ++ ++LVFLP + + Q HL M P
Sbjct: 618 GPETKMSMAQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNP 675
Query: 299 L--SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 355
S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+
Sbjct: 676 DFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQ 735
Query: 356 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIX 415
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 736 KVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMF 795
Query: 416 XXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPR 472
I I L KA++PP + V +A L LD A +++P
Sbjct: 796 RTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 852
Query: 473 GRY------EPTF 479
GR EP F
Sbjct: 853 GRILAKLPIEPRF 865
Score = 43 (20.2 bits), Expect = 2.1e-25, Sum P(3) = 2.1e-25
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 782 CIFSHDLGQPVLPSSSFTCLPEDGVANAASL 812
CIF +G V S+ TC PE ++ L
Sbjct: 873 CIFY--VGDAVCTISAATCFPEPFISEGKRL 901
Score = 38 (18.4 bits), Expect = 2.1e-25, Sum P(3) = 2.1e-25
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 820 SDGSILLLDD 829
SDG I+L+DD
Sbjct: 1078 SDGQIVLVDD 1087
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 205 (77.2 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 54/157 (34%), Positives = 77/157 (49%)
Query: 40 LENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXXXXXXXXGRNCEL 96
L+N V ++GETG GK++Q+PQ+L + I TQPRR + EL
Sbjct: 81 LDNAV--LIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAAISLATRVSDEKRTEL 138
Query: 97 GGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESDXX 156
G VGY + SE ++I F T G+LL E L KY +ILDE HER++ +D
Sbjct: 139 GKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSL-LRKYSCVILDEAHERTIHTDVL 197
Query: 157 XXXXXXXXXXXNDL-----RVVLMSATADITKYRDYF 188
+L +V++MSAT D+ + YF
Sbjct: 198 FGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYF 234
Score = 172 (65.6 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 67/229 (29%), Positives = 103/229 (44%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTEQA 317
V IH+ E+ + ILVFL +E + ++ V L++S+ Q
Sbjct: 269 VFQIHQ-EAPASQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQ 327
Query: 318 LMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
L + K +RKVI++TNIAE+S+TI + YV+D+ ++ + ++ + VS+
Sbjct: 328 LRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 387
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 436
+QA QR GR GR G YRL T+ F E P I + A+
Sbjct: 388 TQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLL-----AMKV 442
Query: 437 PKVLLQKALDPPYPEVVGDA---LDLL---DHKRALQKISPRGRYEPTF 479
P VL + P P+ + A LDLL +HK ++P GR F
Sbjct: 443 PNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAF 491
Score = 38 (18.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 110 LSERSKIVFKTAGVLLDEMRD 130
L RS +F+ G LL ++R+
Sbjct: 60 LQRRSLPIFRARGQLLAQLRN 80
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 226 (84.6 bits), Expect = 2.2e-25, Sum P(4) = 2.2e-25
Identities = 54/167 (32%), Positives = 85/167 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL----AENMEPILCTQPRRFXXXX 83
V +E ++ V E++V +I GETG GK++QVPQ+L+ ++ + I CTQPRR
Sbjct: 254 VYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVAAMS 313
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
+LG EVGY I S+R+ + + T G L E + Y V+I+
Sbjct: 314 VAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEP-DLASYSVMII 372
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRD 190
DE HER++ +D +L++++ SAT D K+ +F D
Sbjct: 373 DEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDD 419
Score = 166 (63.5 bits), Expect = 2.2e-25, Sum P(4) = 2.2e-25
Identities = 49/134 (36%), Positives = 72/134 (53%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKVILATNIAE+S+TI + YVID + Q ++ ++S +V +S++ A QR GR G
Sbjct: 521 RKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAG 580
Query: 388 RTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +RL T ++ LED+ P I + KA+ ++ LD
Sbjct: 581 RTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLML-----KALGINDLIHFDFLD 635
Query: 447 PPYPEVVGDALDLL 460
PP E + AL+ L
Sbjct: 636 PPPHETLVLALEQL 649
Score = 41 (19.5 bits), Expect = 2.2e-25, Sum P(4) = 2.2e-25
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 975 ELSDTVNTKRPMLVSRA 991
EL D+ N K P + RA
Sbjct: 874 ELEDSTNKKMPKVAGRA 890
Score = 37 (18.1 bits), Expect = 2.2e-25, Sum P(4) = 2.2e-25
Identities = 5/29 (17%), Positives = 15/29 (51%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDILNAVHR 631
+WC +++ S+ ++ E ++ + R
Sbjct: 749 QWCYENFIQYRSMKRARDVREQLVGLMQR 777
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 213 (80.0 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 56/169 (33%), Positives = 92/169 (54%)
Query: 300 SSFFKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV 358
+S F++H LHS+V EQ + K+ R++ILA+NIAE+SVTIP V +V+D ++
Sbjct: 910 TSKFRIHFLHSAVSAAEQNKIFQKVPLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDR 969
Query: 359 FWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXX 418
+D + +I W ++S+A QR+GR GRT +G Y L ++ +++D P +
Sbjct: 970 KYDRSTRITGMYTGWQTKSKAMQRQGRAGRTQEGHYYGLYSEQRRQSMKDDALPEMLKLD 1029
Query: 419 XXXXXXXICCAESK-AISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL 466
+ + +++D L A+ PP P VV DA++ L AL
Sbjct: 1030 LTNTCLSVKGFGFRDSVAD---FLAAAISPPPPSVVQDAVNSLKAMDAL 1075
Score = 180 (68.4 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 46/133 (34%), Positives = 69/133 (51%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXXX 84
R++++ V + +++G TG GKS+QVPQ +L + ++ ILC QPRR
Sbjct: 591 RKQLLNLVEGSHFCIVIGATGSGKSTQVPQIILDDAIKQGRGADTRILCLQPRRAAAMWV 650
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERS--KIVFKTAGVLLDEMRDRGLNALK-YKVI 141
R LG VG+ I L+ R + F T G+LL +++D L Y I
Sbjct: 651 AQRVASERGERLGESVGFRIRFDARLANRQGGTVSFVTLGILLKQLQDGVQETLDMYSHI 710
Query: 142 ILDEVHERSVESD 154
++DEVHERS+E D
Sbjct: 711 VIDEVHERSLELD 723
Score = 42 (19.8 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 574 DKQRLDHLQQVLKFDETKVTASLLPKI 600
D R +HL K++E K+TA+ + ++
Sbjct: 1173 DFARSEHLN-FAKYEEAKLTAAQIEQV 1198
Score = 39 (18.8 bits), Expect = 6.1e-11, Sum P(3) = 6.1e-11
Identities = 23/113 (20%), Positives = 45/113 (39%)
Query: 123 VLLDEMRDRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADIT 182
+++DE+ +R L V++ + ER + N + L AD +
Sbjct: 710 IVIDEVHERSLELDLLLVVLKKAIAERLAKGQSLPKIILMSASISNQEQ--LQEYLAD-S 766
Query: 183 KYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSEL 235
+ R L + +L+IP RT F YL+++ ++ +G +L
Sbjct: 767 LHDGKARRLPAHQACPILSIPG---RT-FPVSSIYLDRLLPMIRDKYGEQLDL 815
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 204 (76.9 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 54/137 (39%), Positives = 73/137 (53%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-------P--ILCTQPRR 78
+M IVEK+ +N V +I GETG GK++QVPQFL P I TQPRR
Sbjct: 407 IMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGVTQPRR 466
Query: 79 FXXXXXXXXXXXGRNCELGGEVGYHIGHSKHL-SERSKIVFKTAGVLLDEMRDRGLNALK 137
N E G EVGY I + K L S +KI F T G+L+ E++ L + +
Sbjct: 467 VAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDFLLS-Q 525
Query: 138 YKVIILDEVHERSVESD 154
Y I++DE HER++ +D
Sbjct: 526 YSSILIDEAHERNLNTD 542
Score = 183 (69.5 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 42/114 (36%), Positives = 67/114 (58%)
Query: 297 KPLSSFFKVHILHSSVDTEQALMAMKICK-SHRKVILATNIAESSVTIPKVAYVIDSCRS 355
KP F V L+S++ T + + + R V++ATN+AE+S+TIP + YV+D+ R
Sbjct: 841 KPAGPLF-VLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRV 899
Query: 356 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDH 409
Q +++ + I S E+ W S++ A+QR GR GRT G YR+ + + F DH
Sbjct: 900 KQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFN---DH 950
Score = 56 (24.8 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 568 WQHVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYL---VQSSLHHVSELYED 624
W H K+ L L+ V +D ++ S PK + +CS ++L S +H + +
Sbjct: 1113 WLH--KESDLLSILKVVGAYDY-QIRKS--PKDIDHFCSQNFLNTKSMSEIHKLRHQLTE 1167
Query: 625 ILNAVHRFRPKFLGTSNGLPTYYDP 649
I+N++++ + SN + T +P
Sbjct: 1168 IVNSINQTNHELDPISNPIITLVNP 1192
Score = 41 (19.5 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 245 SPSMANAEIKPEVHKLIHDLVLHIHK-NESDIE 276
S + N + E+HKL H L ++ N+++ E
Sbjct: 1146 SQNFLNTKSMSEIHKLRHQLTEIVNSINQTNHE 1178
Score = 39 (18.8 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 250 NAEIKPEVHKLIHDLVLHIHKNESDIEKSILVF 282
N K E+ K+ +N+++I+ S LV+
Sbjct: 677 NKSFKVEIDKINQQFKSDDQENQNNIKSSNLVY 709
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 234 (87.4 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 78/278 (28%), Positives = 124/278 (44%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ LR+ +++ V +N++ +++GETG GK++Q+ Q+L I CTQPRR
Sbjct: 588 IYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSV 647
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
C LG EVGY I S + I + T G+LL E + + L + Y VI+L
Sbjct: 648 AKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKS--YSVIML 705
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIP 203
DE HER++ +D +L++++ SAT D K+ YF + + IP
Sbjct: 706 DEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFF------KAPIFTIP 759
Query: 204 STNQRTIFQRRVSYL-EQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIH 262
RT F V Y E T+ L D + + + + P + + E+
Sbjct: 760 G---RT-FPVEVLYTKEPETDYL--DASLITVMQ-IHLREPPGDILLFLTGQEEIDTACE 812
Query: 263 DLVLHIHKNESDIEKSILVFLPTYYAL--EQQWHLMKP 298
L + D+ + L+ LP Y AL E Q + P
Sbjct: 813 ILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFDP 848
Score = 151 (58.2 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV++ATNIAE+S+TI + YV+D Q ++ +DS + +SQ+ A+QR GR G
Sbjct: 854 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAG 913
Query: 388 RTCDGQVYRLVTK 400
RT G+ YRL T+
Sbjct: 914 RTGPGKTYRLYTE 926
Score = 45 (20.9 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 22/95 (23%), Positives = 40/95 (42%)
Query: 552 GRKEMVIMGNLCAFQFWQHVFKDKQRLDHLQQVLKFDETKV-TASLLPKIEEEWCSLHYL 610
G+ + I +C+ F KD Q + + ++ + +S L + EW H L
Sbjct: 1118 GKNSVRIQKAICSGFFRNAAKKDPQ--EGYRTLVDSQVVYIHPSSALFNRQPEWVIYHEL 1175
Query: 611 VQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 645
VQ++ ++ E+ + F P F S+ PT
Sbjct: 1176 VQTTKEYMREVTTIDPKWLVEFAPSFFRFSD--PT 1208
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 205 (77.2 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 54/157 (34%), Positives = 77/157 (49%)
Query: 40 LENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXXXXXXXXGRNCEL 96
L+N V ++GETG GK++Q+PQ+L + I TQPRR + EL
Sbjct: 90 LDNAV--LIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAAISLATRVSDEKRTEL 147
Query: 97 GGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESDXX 156
G VGY + SE ++I F T G+LL E L KY +ILDE HER++ +D
Sbjct: 148 GKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSL-LRKYSCVILDEAHERTIHTDVL 206
Query: 157 XXXXXXXXXXXNDL-----RVVLMSATADITKYRDYF 188
+L +V++MSAT D+ + YF
Sbjct: 207 FGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYF 243
Score = 170 (64.9 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTEQA 317
V IH+ E+ + ILVFL +E + ++ V L++S+ Q
Sbjct: 278 VFQIHQ-EAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQ 336
Query: 318 LMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
L + K +RKVI++TNIAE+S+TI + YV+D+ ++ + ++ + VS+
Sbjct: 337 LRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 396
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 436
+QA QR GR GR G YRL T+ F + P I + A+
Sbjct: 397 TQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLL-----AMKV 451
Query: 437 PKVLLQKALDPPYPEVVGDA---LDLL---DHKRALQKISPRGRYEPTF 479
P VL + P P+ + A LDLL +HK ++P GR F
Sbjct: 452 PNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAF 500
Score = 42 (19.8 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 234 ELSSLRYCSGPSPSMANAEIKPE 256
++ S+R C S M+ AE++P+
Sbjct: 616 DVESVRRCLAHSLFMSTAELQPD 638
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 209 (78.6 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 54/162 (33%), Positives = 82/162 (50%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFL----LAENMEPILCTQPRRFXXXXXXXX 87
++ I+ V VT++VG+TG GK++Q+PQ+L + I TQPRR
Sbjct: 28 KQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAVTQPRRVAATTVAAR 87
Query: 88 XXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIILDEV 146
C+LG +VGY I S ++I F T G+LL E + D L+ +Y VI++DE
Sbjct: 88 VAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLS--RYSVIMVDEA 145
Query: 147 HERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
HERS+ +D +LR+++ SAT + YF
Sbjct: 146 HERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYF 187
Score = 165 (63.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 52/159 (32%), Positives = 81/159 (50%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMK-------PLSSFFKVHILHSSVDTEQA 317
V IH E E IL+FL +E L+ P S L++ + T+Q
Sbjct: 237 VFDIHLQEG--EGDILIFLTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQ 294
Query: 318 LMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVNRKIDSAELVWVS 375
+ + + RKV+++TNIAE+SVTI + YV+D C ++ +D + I++ V +S
Sbjct: 295 MYVFEPAPENTRKVVVSTNIAEASVTINGIVYVVD-CGFAKLRAYDPSTGIETLTAVPIS 353
Query: 376 QSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 414
++ A QR GR GRT G+ +RL T+ + L D P I
Sbjct: 354 KAAAVQRAGRAGRTKPGKCFRLYTQHAYEQLPDATIPEI 392
Score = 37 (18.1 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 988 VSRAISYVFDLH 999
V R++ VFD+H
Sbjct: 230 VERSVKTVFDIH 241
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 201 (75.8 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 52/170 (30%), Positives = 82/170 (48%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ R+K+++ V +N ++ G TG GK++Q+P++L I TQPR+
Sbjct: 55 IQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISV 114
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
C LG +VGY + S+ + I + T G LL + D LN K+ VIIL
Sbjct: 115 AQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLN--KFSVIIL 172
Query: 144 DEVHERSVESDXXXXXXXXXXXXXND-----LRVVLMSATADITKYRDYF 188
DE HER++ +D + L+VV+MSAT ++ K +F
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFF 222
Score = 175 (66.7 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 249 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 306
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 258 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 307 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 365
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 366 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 424
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 425 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ C AI D V+ LDPP ++ +AL L
Sbjct: 437 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 467
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 213 (80.0 bits), Expect = 5.3e-25, Sum P(2) = 5.3e-25
Identities = 57/165 (34%), Positives = 81/165 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
++ EKIVE V +N V +I+GETG GKS+Q+ Q L I TQPRR
Sbjct: 6 ILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAVSV 65
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
+ LG +VGY I + +++I + T GVLL E + Y VIILD
Sbjct: 66 ARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLD-DYSVIILD 124
Query: 145 EVHERSVESDXXXXXXXXXXXX-XNDLRVVLMSATADITKYRDYF 188
E HERS+ +D ++ +V++ SAT D K ++F
Sbjct: 125 EAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFF 169
Score = 160 (61.4 bits), Expect = 5.3e-25, Sum P(2) = 5.3e-25
Identities = 51/172 (29%), Positives = 83/172 (48%)
Query: 305 VHILHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 363
++ LH S+ E + + R+ I++TNIAE+S+T+ V YVIDS Q ++ +
Sbjct: 250 IYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPS 309
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 423
+ S +++ +S+ QA QR GR GRT G+ YRL + + +D I
Sbjct: 310 SGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYR--DDFLDATIPEIQRTSLA 367
Query: 424 XXICCAESKAISDPKVLLQKALDPPYPEVVGDAL------DLLDHKRALQKI 469
+ +S + D +L LD P E + DAL D +D A+ +I
Sbjct: 368 GSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRI 419
Score = 38 (18.4 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 234 ELSSLRYCSGPSPSMANAEIKPEVHK 259
+L+ + GP+PS E K E+ K
Sbjct: 645 KLNVRKLSGGPAPSFKVPEEKTELSK 670
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 228 (85.3 bits), Expect = 7.2e-25, Sum P(3) = 7.2e-25
Identities = 53/165 (32%), Positives = 87/165 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ +++++++ + +N + ++VGETG GK++Q+ Q+L + I CTQPRR
Sbjct: 534 IFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSV 593
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
LG EVGY I SE + I + T G+LL E +R+ L+ Y II+
Sbjct: 594 AKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLD--HYSAIIM 651
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ +D +DL++++ SAT D K+ +F
Sbjct: 652 DEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFF 696
Score = 162 (62.1 bits), Expect = 7.2e-25, Sum P(3) = 7.2e-25
Identities = 66/199 (33%), Positives = 101/199 (50%)
Query: 266 LHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL--HSSVDTE-QAL 318
L +H S IL+F+P +E Q ++ L + + +L +S + ++ QA
Sbjct: 732 LQVHL--SGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAK 789
Query: 319 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWV 374
+ K RK I+ATNIAE+S+T+ + +VIDS C+ L+VF N +I D+ ++ +
Sbjct: 790 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK-LKVF---NPRIGMDALQIYPI 845
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKA 433
SQ+ A QR GR GRT GQ +RL T+S + L P I + +S
Sbjct: 846 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANV---VLLLKSLG 902
Query: 434 ISDPKVLLQ-KALDPPYPE 451
+ D LLQ +DPP PE
Sbjct: 903 VQD---LLQFHFMDPP-PE 917
Score = 37 (18.1 bits), Expect = 7.2e-25, Sum P(3) = 7.2e-25
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 604 WCSLHYLVQSSLHHVSEL 621
WC+ H++ ++ V E+
Sbjct: 1027 WCNDHFIHAKAMRKVREV 1044
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 222 (83.2 bits), Expect = 7.3e-25, Sum P(3) = 7.3e-25
Identities = 57/168 (33%), Positives = 86/168 (51%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM-----EPILCTQPRRFXXX 82
V R +++ + EN+V +I+GETG GK++Q+ Q+L E + I+ TQPRR
Sbjct: 352 VFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPRRVAAI 411
Query: 83 XXXXXXXXGRNCELGGEVGYHIGHSKHL-SERSKIVFKTAGVLLDE-MRDRGLNALKYKV 140
LG EVGY I SE +K+ F T G+LL E + D L+ KY
Sbjct: 412 SVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLD--KYSC 469
Query: 141 IILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
+I+DE HERS+ +D DL++++ SAT + K+ +F
Sbjct: 470 VIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFF 517
Score = 157 (60.3 bits), Expect = 7.3e-25, Sum P(3) = 7.3e-25
Identities = 39/79 (49%), Positives = 52/79 (65%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRS-LQVFWDVNRKI--DSAELVWVSQSQAEQRRG 384
RK+I+ATNIAE+S+TI + YVID S L+V+ N KI DS + +S++ A+QR G
Sbjct: 632 RKIIIATNIAETSLTIKGIRYVIDCGYSKLKVY---NPKIGLDSLVITPISKANADQRSG 688
Query: 385 RTGRTCDGQVYRLVTKSFF 403
R GRT G YRL T+ F
Sbjct: 689 RAGRTAPGTAYRLYTEDTF 707
Score = 46 (21.3 bits), Expect = 7.3e-25, Sum P(3) = 7.3e-25
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 579 DHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDIL 626
DHL + F++ + WC+ H++ SL ++ + +L
Sbjct: 841 DHLTLLNVFEQWRAN-----NFSSHWCNKHFVQYKSLVRARDIRDQLL 883
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 227 (85.0 bits), Expect = 9.3e-25, Sum P(3) = 9.3e-25
Identities = 53/165 (32%), Positives = 87/165 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ +++++++ + +N + ++VGETG GK++Q+ Q+L + I CTQPRR
Sbjct: 534 IFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSV 593
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
LG EVGY I SE + I + T G+LL E +R+ L+ Y II+
Sbjct: 594 AKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLD--HYSAIIM 651
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ +D +DL++++ SAT D K+ +F
Sbjct: 652 DEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFF 696
Score = 162 (62.1 bits), Expect = 9.3e-25, Sum P(3) = 9.3e-25
Identities = 66/199 (33%), Positives = 101/199 (50%)
Query: 266 LHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL--HSSVDTE-QAL 318
L +H S IL+F+P +E Q ++ L + + +L +S + ++ QA
Sbjct: 732 LQVHL--SGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAK 789
Query: 319 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWV 374
+ K RK I+ATNIAE+S+T+ + +VIDS C+ L+VF N +I D+ ++ +
Sbjct: 790 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK-LKVF---NPRIGMDALQIYPI 845
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKA 433
SQ+ A QR GR GRT GQ +RL T+S + L P I + +S
Sbjct: 846 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANV---VLLLKSLG 902
Query: 434 ISDPKVLLQ-KALDPPYPE 451
+ D LLQ +DPP PE
Sbjct: 903 VQD---LLQFHFMDPP-PE 917
Score = 37 (18.1 bits), Expect = 9.3e-25, Sum P(3) = 9.3e-25
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 604 WCSLHYLVQSSLHHVSEL 621
WC+ H++ ++ V E+
Sbjct: 1027 WCNDHFIHAKAMRKVREV 1044
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 227 (85.0 bits), Expect = 9.3e-25, Sum P(3) = 9.3e-25
Identities = 53/165 (32%), Positives = 87/165 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ +++++++ + +N + ++VGETG GK++Q+ Q+L + I CTQPRR
Sbjct: 535 IFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYTDYGMIGCTQPRRVAAMSV 594
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
LG EVGY I SE + I + T G+LL E +R+ L+ Y II+
Sbjct: 595 AKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLD--HYSAIIM 652
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ +D +DL++++ SAT D K+ +F
Sbjct: 653 DEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFF 697
Score = 162 (62.1 bits), Expect = 9.3e-25, Sum P(3) = 9.3e-25
Identities = 66/199 (33%), Positives = 101/199 (50%)
Query: 266 LHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL--HSSVDTE-QAL 318
L +H S IL+F+P +E Q ++ L + + +L +S + ++ QA
Sbjct: 733 LQVHL--SGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAK 790
Query: 319 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWV 374
+ K RK I+ATNIAE+S+T+ + +VIDS C+ L+VF N +I D+ ++ +
Sbjct: 791 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK-LKVF---NPRIGMDALQIYPI 846
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKA 433
SQ+ A QR GR GRT GQ +RL T+S + L P I + +S
Sbjct: 847 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANV---VLLLKSLG 903
Query: 434 ISDPKVLLQ-KALDPPYPE 451
+ D LLQ +DPP PE
Sbjct: 904 VQD---LLQFHFMDPP-PE 918
Score = 37 (18.1 bits), Expect = 9.3e-25, Sum P(3) = 9.3e-25
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 604 WCSLHYLVQSSLHHVSEL 621
WC+ H++ ++ V E+
Sbjct: 1028 WCNDHFIHAKAMRKVREV 1045
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 231 (86.4 bits), Expect = 9.4e-25, Sum P(3) = 9.4e-25
Identities = 55/162 (33%), Positives = 83/162 (51%)
Query: 30 SLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXXXX 86
++RE+++ + +N+V ++VGETG GK++Q+ QFL + I CTQPRR
Sbjct: 496 AVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAMSVAK 555
Query: 87 XXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEV 146
LG VGY I + I + T GVLL E + N KY VII+DE
Sbjct: 556 RVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQN-NLEKYSVIIMDEA 614
Query: 147 HERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
HERS+ +D D+++++ SAT + K+ D+F
Sbjct: 615 HERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFF 656
Score = 149 (57.5 bits), Expect = 9.4e-25, Sum P(3) = 9.4e-25
Identities = 35/77 (45%), Positives = 54/77 (70%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRK--IDSAELVWVSQSQAEQRR 383
RKV++ATNIAE+S+T+ ++YV+D+ C+ L+++ N K ID+ ++ +SQ+ A QR
Sbjct: 759 RKVVVATNIAETSLTVHGISYVVDTGYCK-LKMY---NSKLGIDTLQVTPISQANANQRA 814
Query: 384 GRTGRTCDGQVYRLVTK 400
GR GRT G YRL T+
Sbjct: 815 GRAGRTGPGIAYRLYTE 831
Score = 45 (20.9 bits), Expect = 9.4e-25, Sum P(3) = 9.4e-25
Identities = 6/28 (21%), Positives = 15/28 (53%)
Query: 604 WCSLHYLVQSSLHHVSELYEDILNAVHR 631
WCS H+L +L ++ + ++ + +
Sbjct: 987 WCSKHFLHSKTLKRARDIRQQLVEIMSK 1014
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 219 (82.2 bits), Expect = 9.6e-25, Sum P(2) = 9.6e-25
Identities = 50/164 (30%), Positives = 88/164 (53%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFL----LAENMEPILCTQPRRFXXXXXXXX 87
R++ + + + ++ +IVGETG GK++Q+PQ+L ++ + CTQPRR
Sbjct: 379 RDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKDGMRVGCTQPRRVAAMSVAAR 438
Query: 88 XXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIILDEV 146
++G EVGY I + S+++ + + T G+LL E M + L++ Y +++DE
Sbjct: 439 VADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREFMTEPDLSS--YSALMIDEA 496
Query: 147 HERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRD 190
HER+V +D DL++++ SAT + K+ YF D
Sbjct: 497 HERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFDD 540
Score = 156 (60.0 bits), Expect = 9.6e-25, Sum P(2) = 9.6e-25
Identities = 65/227 (28%), Positives = 111/227 (48%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL---HSSVDTE-Q 316
V IH + + IL+FL +E Q + L S K ++ ++++ +E Q
Sbjct: 573 VFQIHTTQP--KGDILIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQ 630
Query: 317 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
+ + ++ RKV+LATNIAE+S+TI + YVID + ++ + + +V S+
Sbjct: 631 SKIFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSR 690
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 435
+ A QR GR GR G+ +RL TK ++ +E+ P I + K++
Sbjct: 691 ASANQRSGRAGRVGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQL-----KSLG 745
Query: 436 DPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGR 482
++L + +DPP E + AL+ L ALQ ++ +G E T GR
Sbjct: 746 INELLDFEFMDPPPTEALIGALNQLF---ALQGLNHKG--ELTKLGR 787
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 198 (74.8 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 51/169 (30%), Positives = 80/169 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ R+KI++ V +N ++ G TG GK++Q+P++L I TQPR+
Sbjct: 55 IQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISV 114
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
C LG +VGY + S+ + I + T G LL + N K+ VIILD
Sbjct: 115 AQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDP-NLTKFSVIILD 173
Query: 145 EVHERSVESDXXXXXXXXXXXXXND-----LRVVLMSATADITKYRDYF 188
E HER++ +D + L+VV+MSAT ++ K +F
Sbjct: 174 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF 222
Score = 174 (66.3 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 249 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 306
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 258 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 307 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 365
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 366 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 424
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 425 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ C AI D V+ LDPP ++ +AL L
Sbjct: 437 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 467
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 216 (81.1 bits), Expect = 1.2e-24, Sum P(4) = 1.2e-24
Identities = 63/212 (29%), Positives = 98/212 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
V +RE I + + N+V +I GETG GK++Q+P+ L + I TQPRR
Sbjct: 78 VSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAARSV 137
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
LG VG+ + + L S I T G+LL E+ DR L+ +Y II+
Sbjct: 138 ASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLD--QYDTIII 195
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIP 203
DE HERS+ D DL++++ SAT D+ ++ +F + E V P
Sbjct: 196 DEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIE-VSGRTYP 254
Query: 204 -STNQRTIFQRRVSYLEQVTELLGVDHGMTSE 234
T R + Q + L+Q+ + + +E
Sbjct: 255 VETRYRPLVQDTEADLDQIEGIFAAVDELVAE 286
Score = 152 (58.6 bits), Expect = 1.2e-24, Sum P(4) = 1.2e-24
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 322 KICKSH--RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQA 379
K+ SH R+++LATN+AE+S+T+P + YVID + + K+ + +SQ+ A
Sbjct: 332 KVFSSHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASA 391
Query: 380 EQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKV 439
QR+GR GR G RL ++ F PA + AI +
Sbjct: 392 NQRQGRCGRVGPGICIRLYDEADFNNR-----PAFTDPEILRTNLASVILQMLAIGLGDI 446
Query: 440 LLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRXXXXXXXXXXXXXXXXK 499
++PP P + D LL+ +A+++ +G T GR +
Sbjct: 447 AAFPFIEPPDPRHIRDGFLLLEELQAVKQ--QKGNIVLTPLGRQLSQIPVDPRLARMVIE 504
Query: 500 FGEIGMLREGILL--GI-LMDTQPLPI 523
++G L E +++ G+ + D + P+
Sbjct: 505 SHQLGCLNEVLVIASGLSIQDPRERPM 531
Score = 55 (24.4 bits), Expect = 1.2e-24, Sum P(4) = 1.2e-24
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 663 PRDMDPLAAD---NEHLGPSFEAKKCVAVPFVAPNQFQSNNVAEKLASIIKEIRVQY 716
P ++PLAA HL P FEAK+ + F N V L +++ RVQY
Sbjct: 684 PEWLEPLAAHLIKKNHLEPHFEAKQGSVIAF-------ENQVLYGL-TVVHRRRVQY 732
Score = 49 (22.3 bits), Expect = 1.2e-24, Sum P(4) = 1.2e-24
Identities = 22/80 (27%), Positives = 33/80 (41%)
Query: 580 HLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGT 639
+L Q LK + +++AS K C YL + +LY + AVH + +
Sbjct: 556 NLWQHLKEQQKELSASQFRKK----CRDEYLAYLRVREWQDLYTQLKQAVHDLKWRL--- 608
Query: 640 SNGLPTYYDPYEFEHTCLLN 659
N P YD H LL+
Sbjct: 609 -NDTPANYDAL---HRALLS 624
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 216 (81.1 bits), Expect = 1.2e-24, Sum P(4) = 1.2e-24
Identities = 63/212 (29%), Positives = 98/212 (46%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
V +RE I + + N+V +I GETG GK++Q+P+ L + I TQPRR
Sbjct: 78 VSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAARSV 137
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
LG VG+ + + L S I T G+LL E+ DR L+ +Y II+
Sbjct: 138 ASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLD--QYDTIII 195
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIP 203
DE HERS+ D DL++++ SAT D+ ++ +F + E V P
Sbjct: 196 DEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIE-VSGRTYP 254
Query: 204 -STNQRTIFQRRVSYLEQVTELLGVDHGMTSE 234
T R + Q + L+Q+ + + +E
Sbjct: 255 VETRYRPLVQDTEADLDQIEGIFAAVDELVAE 286
Score = 152 (58.6 bits), Expect = 1.2e-24, Sum P(4) = 1.2e-24
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 322 KICKSH--RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQA 379
K+ SH R+++LATN+AE+S+T+P + YVID + + K+ + +SQ+ A
Sbjct: 332 KVFSSHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASA 391
Query: 380 EQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKV 439
QR+GR GR G RL ++ F PA + AI +
Sbjct: 392 NQRQGRCGRVGPGICIRLYDEADFNNR-----PAFTDPEILRTNLASVILQMLAIGLGDI 446
Query: 440 LLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRXXXXXXXXXXXXXXXXK 499
++PP P + D LL+ +A+++ +G T GR +
Sbjct: 447 AAFPFIEPPDPRHIRDGFLLLEELQAVKQ--QKGNIVLTPLGRQLSQIPVDPRLARMVIE 504
Query: 500 FGEIGMLREGILL--GI-LMDTQPLPI 523
++G L E +++ G+ + D + P+
Sbjct: 505 SHQLGCLNEVLVIASGLSIQDPRERPM 531
Score = 55 (24.4 bits), Expect = 1.2e-24, Sum P(4) = 1.2e-24
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 663 PRDMDPLAAD---NEHLGPSFEAKKCVAVPFVAPNQFQSNNVAEKLASIIKEIRVQY 716
P ++PLAA HL P FEAK+ + F N V L +++ RVQY
Sbjct: 684 PEWLEPLAAHLIKKNHLEPHFEAKQGSVIAF-------ENQVLYGL-TVVHRRRVQY 732
Score = 49 (22.3 bits), Expect = 1.2e-24, Sum P(4) = 1.2e-24
Identities = 22/80 (27%), Positives = 33/80 (41%)
Query: 580 HLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGT 639
+L Q LK + +++AS K C YL + +LY + AVH + +
Sbjct: 556 NLWQHLKEQQKELSASQFRKK----CRDEYLAYLRVREWQDLYTQLKQAVHDLKWRL--- 608
Query: 640 SNGLPTYYDPYEFEHTCLLN 659
N P YD H LL+
Sbjct: 609 -NDTPANYDAL---HRALLS 624
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 226 (84.6 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 52/165 (31%), Positives = 87/165 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ +++++++ + +N + ++VGETG GK++Q+ Q+L + I CTQPRR
Sbjct: 533 IFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSV 592
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
LG EVGY I SE + I + T G+LL E +R+ L+ Y +I+
Sbjct: 593 AKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLD--HYSAVIM 650
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ +D +DL++++ SAT D K+ +F
Sbjct: 651 DEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFF 695
Score = 162 (62.1 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 66/199 (33%), Positives = 101/199 (50%)
Query: 266 LHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL--HSSVDTE-QAL 318
L +H S IL+F+P +E Q ++ L + + +L +S + ++ QA
Sbjct: 731 LQVHL--SGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAK 788
Query: 319 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWV 374
+ K RK I+ATNIAE+S+T+ + +VIDS C+ L+VF N +I D+ ++ +
Sbjct: 789 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK-LKVF---NPRIGMDALQIYPI 844
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKA 433
SQ+ A QR GR GRT GQ +RL T+S + L P I + +S
Sbjct: 845 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANV---VLLLKSLG 901
Query: 434 ISDPKVLLQ-KALDPPYPE 451
+ D LLQ +DPP PE
Sbjct: 902 VQD---LLQFHFMDPP-PE 916
Score = 37 (18.1 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 604 WCSLHYLVQSSLHHVSEL 621
WC+ H++ ++ V E+
Sbjct: 1026 WCNDHFIHAKAMRKVREV 1043
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 196 (74.1 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 51/170 (30%), Positives = 82/170 (48%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ R+K+++ V +N ++ G TG GK++Q+P++L I TQPR+
Sbjct: 55 IQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISV 114
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
C LG +VGY + S+ + I + T G LL + D L+ K+ VIIL
Sbjct: 115 AQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLS--KFSVIIL 172
Query: 144 DEVHERSVESDXXXXXXXXXXXXXND-----LRVVLMSATADITKYRDYF 188
DE HER++ +D + L+VV+MSAT ++ K +F
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFF 222
Score = 175 (66.7 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 249 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 306
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 258 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 307 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 365
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 366 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 424
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVL 436
Query: 425 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ C AI D V+ LDPP ++ +AL L
Sbjct: 437 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 467
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 317 (116.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 125/435 (28%), Positives = 187/435 (42%)
Query: 71 ILCTQPRRFXXXXXXXXXXXGR--NCELGGEVGYHIGHSKHLSERS-KIVFKTAGVLLDE 127
I+CTQPRR R +C G GY I L + I++ T G++L
Sbjct: 253 IVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 312
Query: 128 MR-DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRD 186
++ D L+++ + I+LDE+HER+++SD DL+V+LMSAT + K+ +
Sbjct: 313 LQSDSHLSSVSH--IVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSE 370
Query: 187 YFRDLGR----GER---VEVLA---------IPSTN-QRTIFQR-----RVSYLE-QVTE 223
YF + G VE L +P QR+ F+R V+ E + E
Sbjct: 371 YFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEQRSQFKRGFMQGHVNRQEKEEKE 430
Query: 224 LLGVDH--GMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILV 281
+ + EL RY + M + LI L+ HI E D +ILV
Sbjct: 431 AIYKERWPDYVRELRK-RYSASTVDVMEMIDDDKVDLNLIAALIRHIVLEEED--GAILV 487
Query: 282 FLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSV 341
FLP W + L ++ S DT + K RK+++ATNIAE+S+
Sbjct: 488 FLPG-------WDNISTLHDLLMSQVMFKS-DTIGQVFK-KTPPGVRKIVIATNIAETSI 538
Query: 342 TIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKS 401
TI V YVID + + +D I + WVS++ A+QR+GR GR G Y L
Sbjct: 539 TIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGL 598
Query: 402 FFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLD 461
L+D++ P I I I+ L + +DPP E V ++ L
Sbjct: 599 RASLLDDYQLPEILRTPLEELCLQIKILRLGGIA---YFLSRLMDPPSDEAVSLSIKHLM 655
Query: 462 HKRALQK---ISPRG 473
AL K ++P G
Sbjct: 656 ELNALDKQEELTPLG 670
Score = 241 (89.9 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 57/169 (33%), Positives = 94/169 (55%)
Query: 31 LREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXX 83
+++++V + ++VT+I GETGCGK++QV QF+L + +E I+CTQPRR
Sbjct: 206 MQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAIS 265
Query: 84 XXXXXXXGR--NCELGGEVGYHIGHSKHLSERS-KIVFKTAGVLLDEMR-DRGLNALKYK 139
R +C G GY I L + I++ T G++L ++ D L+++ +
Sbjct: 266 VAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSH- 324
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
I+LDE+HER+++SD DL+V+LMSAT + K+ +YF
Sbjct: 325 -IVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYF 372
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 231 (86.4 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 55/170 (32%), Positives = 91/170 (53%)
Query: 30 SLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEP------ILCTQPRRF 79
++R ++ + +N+VT+++GETG GK++Q+ QFL + N++ I CTQPRR
Sbjct: 362 AVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDKNGEKRIIACTQPRRV 421
Query: 80 XXXXXXXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDRGLNALKY 138
NC+LG EVGY I K ++++ I + T G+LL E+ + A Y
Sbjct: 422 AAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILLREILADPMLA-NY 480
Query: 139 KVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
II+DE HERS+ +D DL++++ SAT + ++ +F
Sbjct: 481 SCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRFTKFF 530
Score = 147 (56.8 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 46/149 (30%), Positives = 81/149 (54%)
Query: 264 LVLHIHK----NESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK------VHILHSSVD 313
L +H+ + N + + ILVF+ +E L+K + + + ++S++
Sbjct: 566 LTIHLGRWNADNNNANDGDILVFMTGQEDIEITCDLIKEKLNLLEDPPPLDIFPIYSTMP 625
Query: 314 TE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVNRKIDSAEL 371
+ Q + K RKV++ATNIAE+S+T+ + YVID C ++V ++ +D+ ++
Sbjct: 626 QDLQKKIFNKTNLQRRKVVVATNIAETSLTVDGIKYVID-CGLVKVKVYNPKLGMDTLQV 684
Query: 372 VWVSQSQAEQRRGRTGRTCDGQVYRLVTK 400
V +S + A+QR GR GRT G YRL T+
Sbjct: 685 VPISLANADQRSGRAGRTGAGIAYRLYTE 713
Score = 43 (20.2 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 599 KIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYY 647
KI+ E + L E+Y+DI+ + R + TSN + + +
Sbjct: 1016 KIDSEAILNKQKFEKQLLKDKEIYDDIIKQQSKRRSNEISTSNRVSSLF 1064
Score = 42 (19.8 bits), Expect = 2.1e-24, Sum P(3) = 2.1e-24
Identities = 11/52 (21%), Positives = 24/52 (46%)
Query: 579 DHLQQVLKFDETKVTASLLP----KIEEEWCSLHYLVQSSLHHVSELYEDIL 626
DHL + F++ + + KI WC+ ++L SL+ ++ ++
Sbjct: 852 DHLTLLNVFNQWNINLNKFKGNYTKINN-WCNKNFLQLKSLYRAKDIKHQLM 902
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 196 (74.1 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 50/169 (29%), Positives = 80/169 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ R+K+++ V +N ++ G TG GK++Q+P++L I TQPR+
Sbjct: 55 IQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISV 114
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
C LG +VGY + S+ + I + T G LL + N K+ VIILD
Sbjct: 115 AQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDP-NLTKFSVIILD 173
Query: 145 EVHERSVESDXXXXXXXXXXXXXND-----LRVVLMSATADITKYRDYF 188
E HER++ +D + L+VV+MSAT ++ K +F
Sbjct: 174 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF 222
Score = 174 (66.3 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 249 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 306
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 258 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 307 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 365
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 366 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 424
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 425 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ C AI D V+ LDPP ++ +AL L
Sbjct: 437 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 467
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 196 (74.1 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 50/169 (29%), Positives = 80/169 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ R+K+++ V +N ++ G TG GK++Q+P++L I TQPR+
Sbjct: 55 IQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISV 114
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
C LG +VGY + S+ + I + T G LL + N K+ VIILD
Sbjct: 115 AQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDP-NLTKFSVIILD 173
Query: 145 EVHERSVESDXXXXXXXXXXXXXND-----LRVVLMSATADITKYRDYF 188
E HER++ +D + L+VV+MSAT ++ K +F
Sbjct: 174 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF 222
Score = 174 (66.3 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 249 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 306
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 258 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 307 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 365
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 366 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 424
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 425 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ C AI D V+ LDPP ++ +AL L
Sbjct: 437 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 467
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 196 (74.1 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 50/169 (29%), Positives = 80/169 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ R+K+++ V +N ++ G TG GK++Q+P++L I TQPR+
Sbjct: 55 IQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISV 114
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
C LG +VGY + S+ + I + T G LL + N K+ VIILD
Sbjct: 115 AQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDP-NLTKFSVIILD 173
Query: 145 EVHERSVESDXXXXXXXXXXXXXND-----LRVVLMSATADITKYRDYF 188
E HER++ +D + L+VV+MSAT ++ K +F
Sbjct: 174 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF 222
Score = 174 (66.3 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 249 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 306
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 258 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 307 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 365
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 366 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 424
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 425 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ C AI D V+ LDPP ++ +AL L
Sbjct: 437 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 467
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 314 (115.6 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 114/409 (27%), Positives = 181/409 (44%)
Query: 32 REKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXXXXXX 88
R +V V E ++ GETG GKS+Q+P++L + I TQPRR
Sbjct: 7 RRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGAIGVTQPRRVATISVAQRV 66
Query: 89 XXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHE 148
C LG VGY + SE + I + T G LL + L + KY +IILDE HE
Sbjct: 67 AEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLS-KYSIIILDEAHE 125
Query: 149 RSVESDXXXXXXXXXXXXXN------DLRVVLMSATADITKYRDYFRDLGRGERVEVLAI 202
RS+ +D +++VV+MSAT ++ K ++F G VL I
Sbjct: 126 RSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFF-----GH-CSVLHI 179
Query: 203 PSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEI-KPEVHKLI 261
P R E LL + S Y + + + +PE
Sbjct: 180 PG--------RSYPVKEIFCNLLS-----PRDTGSSAYVTEAVKVTLDIHLNEPE----- 221
Query: 262 HDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQAL-MA 320
D+++ + + +IEK+ + +++ ++ + + L+ S+ T+Q +
Sbjct: 222 GDILVFL-TGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTDQQKRIF 280
Query: 321 MKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAE 380
+ K RK +++TNIA +S+TI V YV+DS Q+ + +D E+V +S+S+A
Sbjct: 281 LPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPISKSEAM 340
Query: 381 QRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICC 428
QR GR GRT G+ YRL + F+ + DH P I + C
Sbjct: 341 QRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKC 389
Score = 182 (69.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 71/226 (31%), Positives = 108/226 (47%)
Query: 264 LVLHIHKNESDIEKSILVFLPTYYALEQQWHLM-KPLSSF---FKVHI----------LH 309
+ L IH NE E ILVFL +E+ L+ K S ++VH L+
Sbjct: 211 VTLDIHLNEP--EGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLY 268
Query: 310 SSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDS 368
S+ T+Q + + K RK +++TNIA +S+TI V YV+DS Q+ + +D
Sbjct: 269 GSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDI 328
Query: 369 AELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXIC 427
E+V +S+S+A QR GR GRT G+ YRL + F+ + DH P I +
Sbjct: 329 LEVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLK 388
Query: 428 CAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRG 473
C ++ D V+ LD P + +AL L A+ + + RG
Sbjct: 389 CL---SVHD--VIRFPYLDRPEERHILEALKQLYQCDAIDR-TRRG 428
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 196 (74.1 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 62/196 (31%), Positives = 97/196 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL----AENMEPILCTQPRRFXXXX 83
+++ + I+E V E+ + ++ GETG GK++QVPQFL + + I T+PRR
Sbjct: 248 ILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGITEPRRVAAVA 307
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
N V Y I + +++E ++I F T GVLL E++ L L+YKV+++
Sbjct: 308 MSQRVAKEMNLSQR-VVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL-LLRYKVVLI 365
Query: 144 DEVHERSVESDXXXXXXXXXXXXXND----LRVVLMSATA---DITKYRDYFRDLGRGER 196
DE HERSV +D L++++MSAT D T+ + F +
Sbjct: 366 DEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVEDFTQNQRLFPQPPPVIK 425
Query: 197 VEVLAIPST---NQRT 209
VE P T N+RT
Sbjct: 426 VESRQFPVTVHFNKRT 441
Score = 178 (67.7 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 57/174 (32%), Positives = 86/174 (49%)
Query: 297 KPLSSFFKVHIL--HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSC 353
KP +S +H+L +S + E QA + + R ++ATN+AE+S+TIP + YV+D
Sbjct: 575 KPDASL-PLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCG 633
Query: 354 RSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPA 413
+ + +D + S + WVSQ+ A+QR GR GRT G YRL + + F E P
Sbjct: 634 KVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDFEQFPPPE 693
Query: 414 IXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ 467
I + KA++ KV+ PP E + A +LL ALQ
Sbjct: 694 ITRRPVEDLIL-----QMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQ 742
Score = 40 (19.1 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 953 KLARDSFFFLSESFPFDEMSFGELSDTVNTKRPMLVSRAISYVFDLHPPT 1002
+L + F E FP E++ + D + + + + + I++ F PP+
Sbjct: 676 RLYSSAVFSDFEQFPPPEITRRPVEDLILQMKALNIEKVINFPFPT-PPS 724
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 323 (118.8 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 116/401 (28%), Positives = 186/401 (46%)
Query: 39 VLENRVTL-IVGETGCGKSSQVPQFLL----AENMEPILCTQPRRFXXXXXXXXXXXGRN 93
+LE TL I+G TGCGKS+Q+PQ+L ++ ILCTQPRR
Sbjct: 67 LLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTILCTQPRRVAAISLAERVAQEMG 126
Query: 94 CE-LGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSV 151
+ +G VGY + + +S+ ++I + T G+L+ EM L LKY VI++DE HERS+
Sbjct: 127 EQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDPL-LLKYSVIMIDEAHERSL 185
Query: 152 ESDXXXX----------XXXXXXXXXNDLRVVLMSATADITKYRDYFR-DLGRGERVEVL 200
++D N L++++ SAT + + ++F + + +
Sbjct: 186 QTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNANDFFNFFNYNQTNDKSKDTS 245
Query: 201 AIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKL 260
I S RT + + YLE+ T + + P + + E+ KL
Sbjct: 246 TILSIEGRT-YPVDIHYLEESTS--NYIQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKL 302
Query: 261 IHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHIL--HSSVDTEQAL 318
I L + E L Y+ QQ H + F K +L +S + + +
Sbjct: 303 IQTL-------DDKFE-----ILRQYH---QQHHHQQQ-QPFMKYSLLPMYSGLSINKQI 346
Query: 319 MAMKIC---KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVNRKIDSAELVWV 374
+ K RK+I++TNIAE+S+TI V YV+D C +++ +D ++S +V
Sbjct: 347 KVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVD-CGFVKIKSYDSESGLESLVIVPT 405
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAI 414
S+S A QR GR GR+ G+ YRL T+ ++ L D P I
Sbjct: 406 SKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEI 446
Score = 39 (18.8 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 5/24 (20%), Positives = 14/24 (58%)
Query: 603 EWCSLHYLVQSSLHHVSELYEDIL 626
+WC+ H + ++ V ++ + +L
Sbjct: 583 QWCNQHQINYKAMQRVLQVRKQLL 606
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 196 (74.1 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 50/169 (29%), Positives = 80/169 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ R+K+++ V +N ++ G TG GK++Q+P++L I TQPR+
Sbjct: 133 IQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISV 192
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
C LG +VGY + S+ + I + T G LL + N K+ VIILD
Sbjct: 193 AQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDP-NLTKFSVIILD 251
Query: 145 EVHERSVESDXXXXXXXXXXXXXND-----LRVVLMSATADITKYRDYF 188
E HER++ +D + L+VV+MSAT ++ K +F
Sbjct: 252 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF 300
Score = 174 (66.3 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 249 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 306
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 336 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 394
Query: 307 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 365
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 395 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 454
Query: 366 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 424
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 455 LDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 514
Query: 425 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ C AI D V+ LDPP ++ +AL L
Sbjct: 515 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 545
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 197 (74.4 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 55/167 (32%), Positives = 84/167 (50%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL----LAENMEPILCTQPRRFXXXX 83
V++ + I+E V ++ ++ GETG GK++QVPQFL A + I T+PRR
Sbjct: 254 VLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGIIGVTEPRRVAAIS 313
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
N G V Y I + +++E +KI T GVLL E++ R KY VII+
Sbjct: 314 MSHRVATEMNLS-SGVVSYQIRYEGNVTENTKIKVMTDGVLLKEIQ-RDFLLQKYSVIII 371
Query: 144 DEVHERSVESDXXXXXXXXXXXXXND----LRVVLMSATADITKYRD 186
DE HERSV +D N +++++MSAT + + +
Sbjct: 372 DEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTE 418
Score = 176 (67.0 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 48/147 (32%), Positives = 72/147 (48%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
R ++ATN+AE+S+TIP + YV+D R + F+D + S ++ W+SQ+ A QR GR G
Sbjct: 606 RLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYDRVTGVSSFKVTWISQASANQRAGRAG 665
Query: 388 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 447
RT G YRL + + FG + K ++ KV+ P
Sbjct: 666 RTEPGHCYRLYSSAVFGDFS-----LFSEAEITRRPVEDLVLQMKDLNIEKVVNFPFPTP 720
Query: 448 PYPEVVGDALDLLDHKRALQKISPRGR 474
P E + A +LL AL+K + GR
Sbjct: 721 PSSEALIAAEELLISLGALEKPARHGR 747
Score = 42 (19.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 15/57 (26%), Positives = 22/57 (38%)
Query: 709 IKEIRVQYVEDVSGNQDKAVNGSETPGEAPLCVYFINGSCNRGTGCPFSHSLQAKRP 765
+ +V ++ S NQ G PG C Y + S G FS + +RP
Sbjct: 644 VSSFKVTWISQASANQRAGRAGRTEPGH---C-YRLYSSAVFGDFSLFSEAEITRRP 696
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 197 (74.4 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 53/169 (31%), Positives = 83/169 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM--EPILC-TQPRRFXXXXX 84
+ R +++ ++ +++GETG GK++Q+PQ+L + + I+ TQPRR
Sbjct: 83 IFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAIIAVTQPRRVAAISL 142
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
+ ELG VGY + S+ +KI F T G+LL E L KY IILD
Sbjct: 143 ATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCL-LRKYSCIILD 201
Query: 145 EVHERSVESDXXXXXXXXXXXXXNDL-----RVVLMSATADITKYRDYF 188
E HER++ +D +L +V++MSAT D+ + YF
Sbjct: 202 EAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYF 250
Score = 168 (64.2 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 68/243 (27%), Positives = 108/243 (44%)
Query: 254 KPEVHKLIHDL---VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK------ 304
+P+ H +H V IH+ E+ ILVFL +E + ++
Sbjct: 272 QPQ-HDYLHAALVSVFQIHQ-EAPSSHDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSM 329
Query: 305 -VHILHSSVDTEQALMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 362
V L++S+ Q L + K +RKVI++TNIAE+S+TI + YV+D+ ++
Sbjct: 330 LVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNP 389
Query: 363 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXX 422
+ ++ + VS++QA QR GR GR G YRL T+ F E P I
Sbjct: 390 DSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASV 449
Query: 423 XXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLL---DHKRALQKISPRGRYE 476
+ A+ P VL + P P+ + A L+LL +H+ ++P GR
Sbjct: 450 MLQLL-----AMKIPNVLTFDFMSKPSPDHIQAAIAQLELLGALEHRDGQLTLTPMGRKM 504
Query: 477 PTF 479
F
Sbjct: 505 AAF 507
>UNIPROTKB|F1NWS9 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007140 "male meiosis" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0034587 "piRNA metabolic process" evidence=IEA]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=IEA] [GO:0071547 "piP-body" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
GO:GO:0005524 GO:GO:0005634 GO:GO:0009566 GO:GO:0003676
GO:GO:0004386 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0071547 OMA:INDWFTI
EMBL:AADN02003787 IPI:IPI00574259 Ensembl:ENSGALT00000018863
Uniprot:F1NWS9
Length = 1180
Score = 323 (118.8 bits), Expect = 8.9e-24, Sum P(2) = 8.9e-24
Identities = 115/375 (30%), Positives = 172/375 (45%)
Query: 92 RNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSV 151
R+ LGG VGY +G + +++++ T GVLL + + ++ I +DEVHER+
Sbjct: 9 RSWTLGGFVGYQVGLENISTAETRLLYMTTGVLLQKAVS-AKSLTEFTHIFVDEVHERTE 67
Query: 152 ESDXXXXXXXXXXXXXND-LRVVLMSATADITKYRDYFRDLGRGERVEVLAIPSTN---Q 207
+ D + ++++LMSAT + + DYF AIP+ N
Sbjct: 68 DMDFLLLVIRKLLRTNSQSVKIILMSATINCEEIADYF------------AIPTQNGLNP 115
Query: 208 RTIFQ-RRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDL-V 265
IF+ Y + L + H + ++ S R P M EI LI
Sbjct: 116 ACIFKVEGKPYAVEEYYLDDLKHVIHFQIPSQRI---DKP-MIGKEIYEVAVSLIQSFDE 171
Query: 266 LHIHKNESDI--------EK-SILVFLPTYYALEQQWH-LMKPLSSFFKVHILHSSVDTE 315
L + N + I E+ S+LVFLP + + L + + ++V+ LHS V E
Sbjct: 172 LEMRCNGTYILFRGIFTPERGSVLVFLPGFCEISYMHSCLTRMFNKKWQVYPLHSRVSLE 231
Query: 316 -QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 374
Q + + +RKVIL+TNIAESSVT+P V YVID C + +F D S L W
Sbjct: 232 EQNNVFLNPVPGYRKVILSTNIAESSVTVPDVKYVIDFCLTRTLFCDEETNYQSLRLCWA 291
Query: 375 SQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKA 433
S++ QRRGR GR +G YRLV K F+ + + P + I +
Sbjct: 292 SKTNCYQRRGRAGRVSNGYCYRLVHKDFWTDCIPEKSLPEMLICPLGATVLKI---KKLD 348
Query: 434 ISDPKVLLQKALDPP 448
+ +PK LL AL PP
Sbjct: 349 MGEPKALLATALSPP 363
Score = 41 (19.5 bits), Expect = 8.9e-24, Sum P(2) = 8.9e-24
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 598 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 632
PK E EW + + + V+EL + + V RF
Sbjct: 487 PKDELEWGRSNCIHIKKVREVAELVQLLKERVKRF 521
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 224 (83.9 bits), Expect = 9.6e-24, Sum P(2) = 9.6e-24
Identities = 72/263 (27%), Positives = 125/263 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL--LAENMEPILC-TQPRRFXXXXX 84
V ++ I+E + +++V ++ GETG GK++Q+P+ L ++ ++ TQPRR
Sbjct: 79 VSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTV 138
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
E GG +GY + S H+S+ + + T G+LL E++ DR L ++Y II+
Sbjct: 139 ANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL--MQYDTIII 196
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGERV 197
DE HERS+ D DL++++ SAT D ++ +F + GR V
Sbjct: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256
Query: 198 EVLAIPSTNQRTIFQRRV--SYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKP 255
EV P + +R + + V EL HG L + SG A+
Sbjct: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHG-----DILIFMSGEREIRDTADALN 311
Query: 256 EVHKLIHDLVLHIHKNESDIEKS 278
+++ L H +L ++ S+ E++
Sbjct: 312 KLN-LRHTEILPLYARLSNSEQN 333
Score = 144 (55.7 bits), Expect = 9.6e-24, Sum P(2) = 9.6e-24
Identities = 32/95 (33%), Positives = 55/95 (57%)
Query: 322 KICKSH--RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQA 379
++ +SH R+++LATN+AE+S+T+P + YVID + + K+ + +SQ+ A
Sbjct: 334 RVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASA 393
Query: 380 EQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 414
QR+GR GR +G RL ++ F + + P I
Sbjct: 394 NQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEI 428
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 188 (71.2 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 54/170 (31%), Positives = 84/170 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP----ILCTQPRRFXXXX 83
+++ + I+E + EN + +I GETG GK++QVPQFL I T+PRR
Sbjct: 244 ILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGITEPRRVAAVS 303
Query: 84 XXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIIL 143
N V Y I + + ++ ++I F T GVLL E++ L + KYKVII+
Sbjct: 304 MSQRVAKEMNLS-HRVVSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDFLLS-KYKVIII 361
Query: 144 DEVHERSVESDXXXXXXXXXXXXXND----LRVVLMSATADITKYRDYFR 189
DE HERS+ +D L++++MSAT + + + R
Sbjct: 362 DEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFTENTR 411
Score = 184 (69.8 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 49/147 (33%), Positives = 73/147 (49%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
R ++ATN+AE+S+TIP + YV+D + + F+D + S + W+SQ+ A QR GR G
Sbjct: 603 RLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYDKITGVSSFRVTWISQASANQRAGRAG 662
Query: 388 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 447
RT G YRL + + F E P I + KA++ KV+ P
Sbjct: 663 RTEPGHCYRLYSSAVFMDFEKFSAPEITKRPVEDLIL-----QMKALNIEKVINFPFPTP 717
Query: 448 PYPEVVGDALDLLDHKRALQKISPRGR 474
P E + A +LL AL++ GR
Sbjct: 718 PPTEALAAAEELLIALGALKEPPMTGR 744
Score = 49 (22.3 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 11/51 (21%), Positives = 24/51 (47%)
Query: 953 KLARDSFFFLSESFPFDEMSFGELSDTVNTKRPMLVSRAISYVFDLHPPTD 1003
+L + F E F E++ + D + + + + + I++ F PPT+
Sbjct: 671 RLYSSAVFMDFEKFSAPEITKRPVEDLILQMKALNIEKVINFPFPTPPPTE 721
Score = 44 (20.5 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 30/119 (25%), Positives = 55/119 (46%)
Query: 819 SSDGSILLLDDTDMHFSANLACLYDPSRIISTTCLSDSAICDTSLAGIRILWG-LCHSLK 877
+ GS+ L D + A AC Y S C ++ + ++ IR L G L ++
Sbjct: 833 AGQGSLQKLGDLMVMLGAVGACEY--SGCTPKFC-EENGLRYKAMLEIRRLRGQLTTAVN 889
Query: 878 TVISEAGDNPIPWKEVKCVLWYPSLESYSENLESQKTLMQNFFEHLAIRMLADALYDTR 936
+V ++AG P ++K P E+ + L ++ ++ +HLA R+ A+ L D +
Sbjct: 890 SVCTDAGLYVDP--KMK-----PPTEAQATYL--RQIVLAGLGDHLARRVQAEELLDDK 939
Score = 39 (18.8 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 709 IKEIRVQYVEDVSGNQDKAVNGSETPG 735
+ RV ++ S NQ G PG
Sbjct: 641 VSSFRVTWISQASANQRAGRAGRTEPG 667
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 196 (74.1 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 54/148 (36%), Positives = 71/148 (47%)
Query: 49 GETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXXXXXXXXGRNCELGGEVGYHIG 105
GETG GK++Q+PQ+L + I TQPRR + ELG VGY +
Sbjct: 6 GETGSGKTTQLPQYLYEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVR 65
Query: 106 HSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXX 165
SE ++I F T G+LL E L KY IILDE HER+V +D
Sbjct: 66 FDDVSSEDTRIKFLTDGMLLREAISDSL-LRKYSCIILDEAHERTVHTDVLFGVVKAAQR 124
Query: 166 XXNDLR-----VVLMSATADITKYRDYF 188
+LR V++MSAT D+ + YF
Sbjct: 125 RRKELRKLPLKVIVMSATMDVDLFSQYF 152
Score = 161 (61.7 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 62/212 (29%), Positives = 97/212 (45%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTEQA 317
V IH+ E+ + ILVFL +E + ++ V L++S+ Q
Sbjct: 187 VFQIHQ-EAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQ 245
Query: 318 LMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 376
L + K RKVI+ATNIAE+S+TI + YV+D+ ++ + ++ + VS+
Sbjct: 246 LRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 305
Query: 377 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 436
+QA QR GR GR G YRL T++ F E P I + A+
Sbjct: 306 TQAWQRAGRAGREDSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLL-----AMKV 360
Query: 437 PKVLLQKALDPPYPEVVGDALDLLDHKRALQK 468
P VL + P P+ + A+ LD AL++
Sbjct: 361 PNVLTFDFMSKPSPDHMQAAVAQLDLLGALER 392
Score = 41 (19.5 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 234 ELSSLRYCSGPSPSMANAEIKPE 256
++ S+R C S M+ AE++P+
Sbjct: 525 DVESIRRCLAHSLFMSAAELQPD 547
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 223 (83.6 bits), Expect = 3.7e-23, Sum P(2) = 3.7e-23
Identities = 55/151 (36%), Positives = 81/151 (53%)
Query: 42 NRVTLIVGETGCGKSSQVPQFLL--AENMEPILC-TQPRRFXXXXXXXXXXXGRNCELGG 98
N+V +I GETG GK++Q+P+ L ++ ++ TQPRR +LG
Sbjct: 115 NQVVIIAGETGSGKTTQIPKICLELGRGVDGLIGHTQPRRIAARTVANRIAEELGTKLGE 174
Query: 99 EVGYHIGHSKHLSERSKIVFKTAGVLLDEM-RDRGLNALKYKVIILDEVHERSVESDXXX 157
+VGY + + +SE+S I T G+LL EM RDR L LKY II+DE HERS+ D
Sbjct: 175 QVGYKVRFNDQVSEQSYIKLMTDGILLAEMQRDRLL--LKYDTIIIDEAHERSLNIDFIL 232
Query: 158 XXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DL++++ SAT D ++ +F
Sbjct: 233 GYLKQILIKRPDLKLIITSATIDPQRFAKHF 263
Score = 140 (54.3 bits), Expect = 3.7e-23, Sum P(2) = 3.7e-23
Identities = 37/121 (30%), Positives = 64/121 (52%)
Query: 300 SSFFKVHILHSSVDTEQALMAM----KICKSH--RKVILATNIAESSVTIPKVAYVIDSC 353
++ K ++ H++V A + + +I K H R ++LATN+AE+S+T+P + YVID
Sbjct: 342 AALVKANLRHTNVLPLYARLTVSEQNQIFKPHSGRNIVLATNVAETSLTVPGIKYVIDPG 401
Query: 354 RSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPA 413
+ + K+ + VSQ+ A QR GR GR +G RL ++ + + + P
Sbjct: 402 TARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKSRAEFTDPE 461
Query: 414 I 414
I
Sbjct: 462 I 462
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 210 (79.0 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 51/168 (30%), Positives = 89/168 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRFXXX 82
V ++++++++ +N+V +I+GETG GK++Q+PQ+L+ + I TQPRR
Sbjct: 225 VHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAAT 284
Query: 83 XXXXXXXXGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKV 140
N LG EVGY I K ++ + + T G+LL E + D L+ KY
Sbjct: 285 SVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLS--KYSC 342
Query: 141 IILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
I++DE HER++ +D L++++ SAT + K+ ++F
Sbjct: 343 IMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFF 390
Score = 146 (56.5 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 53/167 (31%), Positives = 84/167 (50%)
Query: 253 IKPE---VHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQW----HLMKPLSSFFKV 305
++PE +H I + IH +S + ILVFL +E+ +M L S K
Sbjct: 411 LQPEANYIHAAI-TTIFQIHTTQS-LPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQ 468
Query: 306 HIL---HSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 361
I+ ++++ EQ L + + RKV+LATNIAE+S+TI + YVID + +
Sbjct: 469 MIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYV 528
Query: 362 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLE 407
+ + V S++ +QR GR GR G+ +R+ TK S+ LE
Sbjct: 529 PSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELE 575
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 222 (83.2 bits), Expect = 9.0e-23, Sum P(3) = 9.0e-23
Identities = 54/165 (32%), Positives = 86/165 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL--LAENMEPILC-TQPRRFXXXXX 84
V R+ I + + ++V ++ GETG GK++Q+P+ L ++ TQPRR
Sbjct: 89 VSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAARSV 148
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
ELGG VGY + + +S++++I T G+LL E++ DR LN +Y II+
Sbjct: 149 ANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLN--QYDTIII 206
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ D DL+V++ SAT D ++ +F
Sbjct: 207 DEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHF 251
Score = 145 (56.1 bits), Expect = 9.0e-23, Sum P(3) = 9.0e-23
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 322 KICKSH--RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQA 379
KI + H R+++LATN+AE+S+T+P + YVID + + K+ + +SQ+ A
Sbjct: 345 KIFQPHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASA 404
Query: 380 EQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 414
QR+GR GRT +G RL ++ F + + P I
Sbjct: 405 NQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEI 439
Score = 41 (19.5 bits), Expect = 9.0e-23, Sum P(3) = 9.0e-23
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 571 VFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDI 625
V ++ +LD L LK V K+ E C LH L +S V E +
Sbjct: 966 VLREDWKLDQLPAHLKITYRAVDHRNR-KLNES-CDLHELKESLKEKVQETLSQV 1018
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 222 (83.2 bits), Expect = 9.0e-23, Sum P(3) = 9.0e-23
Identities = 54/165 (32%), Positives = 86/165 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL--LAENMEPILC-TQPRRFXXXXX 84
V R+ I + + ++V ++ GETG GK++Q+P+ L ++ TQPRR
Sbjct: 89 VSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAARSV 148
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
ELGG VGY + + +S++++I T G+LL E++ DR LN +Y II+
Sbjct: 149 ANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLN--QYDTIII 206
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ D DL+V++ SAT D ++ +F
Sbjct: 207 DEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHF 251
Score = 145 (56.1 bits), Expect = 9.0e-23, Sum P(3) = 9.0e-23
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 322 KICKSH--RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQA 379
KI + H R+++LATN+AE+S+T+P + YVID + + K+ + +SQ+ A
Sbjct: 345 KIFQPHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASA 404
Query: 380 EQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 414
QR+GR GRT +G RL ++ F + + P I
Sbjct: 405 NQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEI 439
Score = 41 (19.5 bits), Expect = 9.0e-23, Sum P(3) = 9.0e-23
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 571 VFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDI 625
V ++ +LD L LK V K+ E C LH L +S V E +
Sbjct: 966 VLREDWKLDQLPAHLKITYRAVDHRNR-KLNES-CDLHELKESLKEKVQETLSQV 1018
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 183 (69.5 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 52/136 (38%), Positives = 67/136 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-----AENME--P--ILCTQPRR 78
V KI+E + N V +I GETG GK++QVPQFL AE+ P + TQPRR
Sbjct: 393 VFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGITQPRR 452
Query: 79 FXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKY 138
+ G +VGY I E +K+ F T GVLL EM KY
Sbjct: 453 VAAVSMAERVANELG-DHGHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMM-HDFKLTKY 510
Query: 139 KVIILDEVHERSVESD 154
II+DE HER++ +D
Sbjct: 511 SSIIIDEAHERNINTD 526
Score = 182 (69.1 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 42/97 (43%), Positives = 61/97 (62%)
Query: 308 LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 366
L+S + T EQ + K + R I+ATN+AE+S+TIP V YV+DS RS + ++ + +
Sbjct: 734 LYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGV 793
Query: 367 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF 403
S E+ WVS++ A QR GR GRT G YRL + + F
Sbjct: 794 QSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVF 830
Score = 109 (43.4 bits), Expect = 5.8e-15, Sum P(3) = 5.8e-15
Identities = 36/124 (29%), Positives = 52/124 (41%)
Query: 74 TQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGL 133
TQPRR + G +VGY I E +K+ F T GVLL EM
Sbjct: 448 TQPRRVAAVSMAERVANELG-DHGHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMM-HDF 505
Query: 134 NALKYKVIILDEVHERSVESDXXXXXXX------XXXXXXND-----LRVVLMSATADIT 182
KY II+DE HER++ +D N L++++MSAT ++
Sbjct: 506 KLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATLRVS 565
Query: 183 KYRD 186
+ +
Sbjct: 566 DFSE 569
Score = 42 (19.8 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 571 VFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSEL 621
+F D ++ + ++ V A+ P IE+ C ++ S L+++ E+
Sbjct: 1099 LFPDDAKITNRTSIINIPYIPVLATRTPNIED--CFVYIHPTSILNNLGEM 1147
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 184 (69.8 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 65/217 (29%), Positives = 108/217 (49%)
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLP------TYYAL--EQQWHLMKP-LSSFFKV 305
P+ K + V+ IH+ E D + +L FL T ++ EQ L + + +V
Sbjct: 224 PDYIKSTVETVVKIHQTEGDGD--VLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 281
Query: 306 HILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 363
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 282 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 340
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 423
I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 341 TAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVI 400
Query: 424 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
+ KA+ VL + PP + + AL+LL
Sbjct: 401 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 432
Score = 167 (63.8 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 47/147 (31%), Positives = 66/147 (44%)
Query: 74 TQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRG 132
TQPRR R LG EVGY I + ++I F T G+L+ EM
Sbjct: 75 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDP 134
Query: 133 LNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLG 192
L KY VI+LDE HER++ +D DLR+++ SAT D K+RD+F
Sbjct: 135 L-LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNE 193
Query: 193 RGERVEVLAIPSTNQRTIFQRRVSYLE 219
+ + T + F + YL+
Sbjct: 194 TSDPARDTCVILTVEGRTFPVDIFYLQ 220
Score = 43 (20.2 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 601 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 644
+ +WC H+L L + + E + + +F+ P+ +S G P
Sbjct: 530 DSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPR--KSSEGDP 572
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 303 (111.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 113/428 (26%), Positives = 187/428 (43%)
Query: 71 ILCTQPRRFXXXXXXXXXXXGR--NCELGGEVGYHIGHSKHLSERS-KIVFKTAGVLLDE 127
I+CTQPRR R +C G GY I L + I++ T G++L
Sbjct: 259 IVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 318
Query: 128 MR-DRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRD 186
++ D L+++ + I+LDE+HER+++SD +DL+V+LMSAT + K+ +
Sbjct: 319 LQSDPYLSSVSH--IVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSE 376
Query: 187 YFRDLGRGERVEVLAIPSTNQRTIFQ---RRVSYL-EQVTELLGVDHG-MTSELSSLRYC 241
YF G + + + + ++ Y+ EQ G M ++ R
Sbjct: 377 YF---GNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGFMQGHVN--RQE 431
Query: 242 SGPSPSMANAEIKPEVHKLIH----DLVLHIHKNESD-IEKSILVFLPTYYALEQQ-WHL 295
++ V +L V I E D ++ +++V L Y LE++ +
Sbjct: 432 KEEKEAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAI 491
Query: 296 MKPLSSFFKVHILH----SSVDTEQALMAMKICKSH---RKVILATNIAESSVTIPKVAY 348
+ L + + LH S V + M+ ++ RK+++ATNIAE+S+TI V Y
Sbjct: 492 LVFLPGWDNISTLHDLLMSQVMFKSGTMSQVFKRTPPGVRKIVIATNIAETSITIDDVVY 551
Query: 349 VIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLED 408
VID + + +D I + WVS++ A+QR+GR GR G Y L L+D
Sbjct: 552 VIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDD 611
Query: 409 HECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK 468
++ P I I I+ L + +DPP E V ++ L AL K
Sbjct: 612 YQLPEILRTPLEELCLQIKILRLGGIA---YFLSRLMDPPSNEAVLLSIRHLMELNALDK 668
Query: 469 ---ISPRG 473
++P G
Sbjct: 669 QEELTPLG 676
Score = 240 (89.5 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 57/169 (33%), Positives = 94/169 (55%)
Query: 31 LREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRRFXXXX 83
+++++V + ++VT+I GETGCGK++QV QF+L +E I+CTQPRR
Sbjct: 212 MQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAIS 271
Query: 84 XXXXXXXGR--NCELGGEVGYHIGHSKHLSERS-KIVFKTAGVLLDEMR-DRGLNALKYK 139
R +C G GY I L + I++ T G++L ++ D L+++ +
Sbjct: 272 VAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSH- 330
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
I+LDE+HER+++SD +DL+V+LMSAT + K+ +YF
Sbjct: 331 -IVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYF 378
Score = 39 (18.8 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 573 KDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSL---HHVS-ELYEDILNA 628
KD R DHL V F+ + + E+++C ++L ++L H++ + E +L A
Sbjct: 736 KDT-RSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGA 794
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 183 (69.5 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 38/109 (34%), Positives = 62/109 (56%)
Query: 308 LHSSVDTEQALMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 366
L+S + TE + + HR I+ATN+AE+S+TIP + YV+D ++ + ++ +
Sbjct: 707 LYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSV 766
Query: 367 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAI 414
E+ W+S++ A+QR GR GRT G YRL + + F + H P I
Sbjct: 767 QKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEI 815
Score = 167 (63.8 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 50/177 (28%), Positives = 80/177 (45%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL--------AENMEPILCTQPRRF 79
+++ ++I+E++ N V +I G TG GK++Q+PQFL +EN I TQPRR
Sbjct: 400 IVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIAITQPRRV 459
Query: 80 XXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYK 139
+V Y I ++ + I F T G+LL E+ L Y
Sbjct: 460 AAVSIAKRVSEELT-GFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDFL-LTAYS 517
Query: 140 VIILDEVHERSVESDXXXXXXXXXXXXXND----------LRVVLMSATADITKYRD 186
+I+DE HERSV +D + L++++MSAT +T + +
Sbjct: 518 AVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRVTDFSE 574
Score = 46 (21.3 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 8/32 (25%), Positives = 19/32 (59%)
Query: 601 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 632
+ ++C +YL + +L V+ L + I+ + R+
Sbjct: 986 KRKFCKENYLREKALEEVTNLRKQIIGLLKRY 1017
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 294 (108.6 bits), Expect = 4.7e-21, Sum P(2) = 4.7e-21
Identities = 104/412 (25%), Positives = 178/412 (43%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ ++K+V+ V EN ++ GETG GK++Q+PQ+L + I TQPRR
Sbjct: 20 IYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNGRIGVTQPRRVAAITV 79
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
LG EVGY + ++ + I + T G LL E + D L +Y ++IL
Sbjct: 80 AQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSLT--QYSIVIL 137
Query: 144 DEVHERSVESDXXXXXXXXXXXXXN-----DLRVVLMSATADITKYRDYFRDLGRGERVE 198
DE HERS+ +D + L+VV+MSAT + K ++ +
Sbjct: 138 DEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFYGNC------P 191
Query: 199 VLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH 258
V IP R E L+G + S Y + + +
Sbjct: 192 VFTIPG--------RTYPVKETFCNLIG-----PKDKESSVYVK----EVVKMTLDVHTN 234
Query: 259 KLIHDLVLHIH-KNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQA 317
+ D+++ + ++E + +L H + + + + S +Q
Sbjct: 235 EAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVH-DRSVDGLLILSLYGSMPTDQQR 293
Query: 318 LMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQS 377
+ K RK ++ATNIA +S+TI + Y++DS Q+ + +D E+V +S+S
Sbjct: 294 QIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISKS 353
Query: 378 QAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICC 428
+A+QR GR GRT G+ +R+ +K F+ T + ++ P I + C
Sbjct: 354 EAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKC 405
Score = 182 (69.1 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 76/261 (29%), Positives = 122/261 (46%)
Query: 240 YCS--GPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM- 296
+C+ GP ++ +K EV K+ L +H NE+ ILVFL +E+ L+
Sbjct: 206 FCNLIGPKDKESSVYVK-EVVKM----TLDVHTNEA--AGDILVFLTGQSEIEKACDLLF 258
Query: 297 ---KPLSSFFKVH----------ILHSSVDTEQALMAMKIC-KSHRKVILATNIAESSVT 342
+ L + VH L+ S+ T+Q + K RK ++ATNIA +S+T
Sbjct: 259 EKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLT 318
Query: 343 IPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSF 402
I + Y++DS Q+ + +D E+V +S+S+A+QR GR GRT G+ +R+ +K F
Sbjct: 319 IDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDF 378
Query: 403 FGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLD 461
+ T + ++ P I + C + D V+ LD P + AL L
Sbjct: 379 WDTCMPEYTIPEIQRTSLTSVILTLKCL---GVHD--VIRFPYLDCPEERFILTALKQLY 433
Query: 462 HKRALQKISPRGRYEPTFYGR 482
A+ + RG E T GR
Sbjct: 434 QYDAIDR---RG--EVTKLGR 449
Score = 38 (18.4 bits), Expect = 4.7e-21, Sum P(2) = 4.7e-21
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 883 AGDNPIPWKEVKCVLWYPSLESYSENLESQKTLMQ 917
A +NP W + + W ++S + ++ L++
Sbjct: 530 ASENPSAWCKENWIHWRAVKSAFSVETQLREILLR 564
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 213 (80.0 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 59/153 (38%), Positives = 79/153 (51%)
Query: 34 KIVEKVLENRVTLIVGETGCGKSSQVPQFLL----AENMEPILCTQPRRFXXXXXXXXXX 89
+IVE + EN VT++ GETG GK++Q+PQFL A E I T+PRR
Sbjct: 244 RIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGELIGITEPRRVAAIAMAQRV- 302
Query: 90 XGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHER 149
G EV Y I + SE + I+F T GVL+ EM ++ + KY VI++DE HER
Sbjct: 303 -GVELAKPDEVSYQIRYEGTRSETTNILFMTDGVLMKEM-EQDVMLKKYSVILIDEAHER 360
Query: 150 SVESDXXXXXXXXX----XXXXNDLRVVLMSAT 178
S+ SD LR+V+MSAT
Sbjct: 361 SMYSDVLIGMLSRIVPLRSKTARPLRLVIMSAT 393
Score = 128 (50.1 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
R +++TN+AE+S+TIP V YVID + +D + + +SQ+ +QR GR G
Sbjct: 601 RLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAG 660
Query: 388 RTCDGQVYRLVTKSFF 403
R G YRL + + +
Sbjct: 661 RISAGHAYRLYSSAVY 676
Score = 43 (20.2 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 16/74 (21%), Positives = 29/74 (39%)
Query: 763 KRPACKFFYSLQGCRNGDSCI----FSHDLGQPVLPSSSFTCLPEDGVANAASLLRLFPT 818
+R A + F + NGD + + +G P CLP + + R+F
Sbjct: 536 ERGAAEAFDDYEEFENGDGDLSDGKVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDE 595
Query: 819 SSDGSILLLDDTDM 832
+ G L + T++
Sbjct: 596 TPAGMRLCVISTNV 609
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 174 (66.3 bits), Expect = 7.1e-21, Sum P(3) = 7.1e-21
Identities = 41/115 (35%), Positives = 68/115 (59%)
Query: 304 KVHIL--HSSVDTEQALMAMKICKS-HRKVILATNIAESSVTIPKVAYVIDSCRSLQVFW 360
++H+L +S + T++ L + R V+LATN+AE+S+TIP + YV DS RS + +
Sbjct: 674 RMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVFDSGRSKERKY 733
Query: 361 DVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAI 414
D + S E+ W+S++ A QR GR GRT G +RL + + + L++ P +
Sbjct: 734 DQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLDEFALPEL 788
Score = 170 (64.9 bits), Expect = 7.1e-21, Sum P(3) = 7.1e-21
Identities = 48/138 (34%), Positives = 72/138 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLA------ENMEP--ILCTQPRRF 79
V+S ++I+E + N + ++ G TG GK++Q+PQFL ++ P I TQPRR
Sbjct: 359 VVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPGMIGITQPRRV 418
Query: 80 XXXXXXXXXXXGRNCELGG---EVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNAL 136
ELG +VGY I +++ + + F T GVLL E+ + L
Sbjct: 419 AAVSMSKRVAE----ELGDHSQKVGYQIRFEGTVNKDTAVKFMTDGVLLREVA-QDLALR 473
Query: 137 KYKVIILDEVHERSVESD 154
KY I++DE HERSV +D
Sbjct: 474 KYSAIVVDEAHERSVNTD 491
Score = 46 (21.3 bits), Expect = 7.1e-21, Sum P(3) = 7.1e-21
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 602 EEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKF 636
E+WC H++ L +L + I+ + P F
Sbjct: 955 EKWCESHFVRFKVLKEAQKLRQQIVQLLKTNIPSF 989
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 201 (75.8 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 77/264 (29%), Positives = 119/264 (45%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM---EPILCTQPRRFXXXXX 84
+++ ++++E + EN + ++ GETG GK++Q+PQFL + I T+PRR
Sbjct: 262 ILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTEPRRVAAIAM 321
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
N EV Y I +++ ++I F T GVLL E+ L + KY VIILD
Sbjct: 322 SKRVAHEMNLP-ESEVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLLS-KYSVIILD 379
Query: 145 EVHERSVESDXXXXXXXXXXXXXND----LRVVLMSAT---ADITKYRDYFRDLGRGERV 197
E HERSV +D + L++++MSAT +D T+ F+ +V
Sbjct: 380 EAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTENTRLFKIPPPLLKV 439
Query: 198 EVLAIPSTNQRTIFQRRV--SYL-EQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIK 254
E P T FQ+R Y+ E + L + H E L + +G E+
Sbjct: 440 EARQFPVTIH---FQKRTPDDYVAEAYRKTLKI-HNKLPEGGILIFVTGQQ------EVN 489
Query: 255 PEVHKLIHDLVLHIHKNESDIEKS 278
V KL H H D+ K+
Sbjct: 490 QLVRKLRRTFPYH-HAPTKDVAKN 512
Score = 143 (55.4 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 34/109 (31%), Positives = 59/109 (54%)
Query: 308 LHSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 366
L+S + +E Q + + + R +++TN+AE+S+TIP + YV+D R +D +
Sbjct: 622 LYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGV 681
Query: 367 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAI 414
+ + + S++ A+QR GR GR G YRL + + + ED P I
Sbjct: 682 SAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDI 730
Score = 43 (20.2 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 693 PNQFQSNNVAEKLASIIKEIRVQYVEDVSGN 723
P +N + +K S ++++RVQ +++ N
Sbjct: 893 PEFCAANGLRQKAMSEVRKLRVQLTNEINLN 923
Score = 41 (19.5 bits), Expect = 1.8e-20, Sum P(3) = 1.8e-20
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 588 DETKVTASLLPKIEEEWCSLHYLVQSSLHHVSE 620
D TK+ + IE EW L+ + ++ V E
Sbjct: 1017 DSTKMFIRGITAIEPEWLLLYVPLLCNIREVRE 1049
Score = 39 (18.8 bits), Expect = 7.2e-10, Sum P(3) = 7.2e-10
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 256 EVHKLIHDLVLHIHKNESDIEKSI 279
EV KL L I+ N SD+E +
Sbjct: 908 EVRKLRVQLTNEINLNVSDVELGV 931
>UNIPROTKB|E2RNZ8 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 EMBL:AAEX03006064 EMBL:AAEX03006065
EMBL:AAEX03006066 Ensembl:ENSCAFT00000029096 Uniprot:E2RNZ8
Length = 1115
Score = 252 (93.8 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 72/213 (33%), Positives = 102/213 (47%)
Query: 278 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 335
S+LVFLP + L+ + +V+ LHSSV E Q + + +RK+IL+TN
Sbjct: 120 SVLVFLPGLGEINYMHELLTNMVHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN 179
Query: 336 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 395
IAESSVT+P V YVID C + + D + S L W S++ QR+GR GR G Y
Sbjct: 180 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSKGYCY 239
Query: 396 RLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVG 454
RLV + F+ ++ DH P + + + + +P+ LL AL PP +
Sbjct: 240 RLVHRDFWDSSIPDHVIPEMLRCPLGSTVLKVKLLD---MGEPRALLATALSPPSLSDIE 296
Query: 455 DALDLLDHKRALQKISPRGRYEP-----TFYGR 482
+ LL AL R P TF GR
Sbjct: 297 RTILLLKEVGALAVSGQREDENPHDGELTFLGR 329
Score = 78 (32.5 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 598 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 632
PK E +W LHY+ + V+ELYE++ N + +F
Sbjct: 416 PKDELDWGRLHYVQIKRIREVAELYEELKNRISQF 450
Score = 52 (23.4 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 170 LRVVLMSATADITKYRDYF 188
++V+LMSAT + ++ DYF
Sbjct: 14 VKVILMSATINCKEFADYF 32
>UNIPROTKB|J9P8U1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 EMBL:AAEX03006064 EMBL:AAEX03006065
EMBL:AAEX03006066 Ensembl:ENSCAFT00000043378 Uniprot:J9P8U1
Length = 1120
Score = 252 (93.8 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 72/213 (33%), Positives = 102/213 (47%)
Query: 278 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 335
S+LVFLP + L+ + +V+ LHSSV E Q + + +RK+IL+TN
Sbjct: 125 SVLVFLPGLGEINYMHELLTNMVHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN 184
Query: 336 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 395
IAESSVT+P V YVID C + + D + S L W S++ QR+GR GR G Y
Sbjct: 185 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSKGYCY 244
Query: 396 RLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVG 454
RLV + F+ ++ DH P + + + + +P+ LL AL PP +
Sbjct: 245 RLVHRDFWDSSIPDHVIPEMLRCPLGSTVLKVKLLD---MGEPRALLATALSPPSLSDIE 301
Query: 455 DALDLLDHKRALQKISPRGRYEP-----TFYGR 482
+ LL AL R P TF GR
Sbjct: 302 RTILLLKEVGALAVSGQREDENPHDGELTFLGR 334
Score = 78 (32.5 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 598 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 632
PK E +W LHY+ + V+ELYE++ N + +F
Sbjct: 421 PKDELDWGRLHYVQIKRIREVAELYEELKNRISQF 455
Score = 52 (23.4 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 170 LRVVLMSATADITKYRDYF 188
++V+LMSAT + ++ DYF
Sbjct: 19 VKVILMSATINCKEFADYF 37
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 278 (102.9 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 90/285 (31%), Positives = 137/285 (48%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP--------ILCTQPRRF 79
V R+ IVE + +RV ++ GETG GKS+QVP FLL + + I+CTQPRR
Sbjct: 573 VFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIVCTQPRRI 632
Query: 80 XXXXXXXXXXXGRNCELG--GE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLN 134
CE G G GY I SE +++++ T GVLL ++++ GL
Sbjct: 633 SAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLL 692
Query: 135 ALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF------ 188
A +I+DEVHERSV+SD +DL ++LMSAT D K+ YF
Sbjct: 693 A-DVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPIL 751
Query: 189 RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQ-VTELLGVDHGMTSELSSLRYCSG-- 243
R GR VEV + + T + ++ Y ++ + E + +TS+ ++
Sbjct: 752 RISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGVKKYQEYI 811
Query: 244 PSPSMANAEIKPEVHKLI----HDLV-LHIHKNESDIEKSILVFL 283
P S A+ E+ P K H ++ ++ HK D+ +LV+L
Sbjct: 812 PVQSGASPELNPFYQKYSSRTQHAILYMNPHKINLDLILELLVYL 856
Score = 267 (99.0 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 85/274 (31%), Positives = 144/274 (52%)
Query: 218 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLH--IHKNES-- 273
+++ E + V G + EL+ Y S + +A + HK+ DL+L ++ ++S
Sbjct: 804 VKKYQEYIPVQSGASPELNPF-YQKYSSRTQ-HAILYMNPHKINLDLILELLVYLDKSPQ 861
Query: 274 --DIEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTE-QALMAMKICKS 326
+IE ++L+FLP ++Q + L+ F+ +V LHS + T+ QA M
Sbjct: 862 FRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPG 921
Query: 327 HRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRT 386
RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR
Sbjct: 922 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 981
Query: 387 GRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQKAL 445
GR DG +RL T+ F D+ P I +C K + P+ L KAL
Sbjct: 982 GRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEE----LCLHIMKCDLGSPEDFLSKAL 1037
Query: 446 DPPYPEVVGDALDLLDHKRALQ----KISPRGRY 475
DPP +V+ +A++LL A + K++P G++
Sbjct: 1038 DPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQH 1071
>UNIPROTKB|H0YJJ2 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:AL136001 EMBL:AL132712 HGNC:HGNC:20122
Ensembl:ENST00000557332 Uniprot:H0YJJ2
Length = 918
Score = 262 (97.3 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
Identities = 102/333 (30%), Positives = 150/333 (45%)
Query: 170 LRVVLMSATADITKYRDYFRDLGRGERVEVLAIPSTNQRT---IFQRRVSYLEQVTE--L 224
++VVLMSAT ++ DYF A+P N+ IF+ V E L
Sbjct: 8 VKVVLMSATISCKEFADYF------------AVPVQNKMNPAYIFEVE-GKPHSVEEYYL 54
Query: 225 LGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNES------DIEKS 278
++H S+LS P + E+ + ++ DL + N++ +E+S
Sbjct: 55 NDLEHIHHSKLSP-HLLEEPVITKDIYEVAVSLIQMFDDLDMKESGNKAWSGAQFVLERS 113
Query: 279 -ILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 335
+LVFLP + L+ L +V+ LHSSV E Q + + +RK+IL+TN
Sbjct: 114 SVLVFLPGLGEINYMHELLTSLVHKRLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTN 173
Query: 336 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 395
IAESSVT+P V YVID C + + D + S L W S++ QR+GR GR G Y
Sbjct: 174 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCY 233
Query: 396 RLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVG 454
RLV K F+ ++ DH P + + + + +P+ LL AL PP +
Sbjct: 234 RLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLD---MGEPRALLATALSPPGLSDIE 290
Query: 455 DALDLLDHKRALQKISPRGRYEP-----TFYGR 482
+ LL AL R P TF GR
Sbjct: 291 RTILLLKEVGALAVSGQREDENPHDGELTFLGR 323
Score = 65 (27.9 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 561 NLCAFQFWQHV--------FKDKQRLDHLQQVLKFDETKV---TASL-LPKIEEEWCSLH 608
N A F QH+ F + D + V F K T L PK E W L+
Sbjct: 361 NFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQTGELRYPKDELNWGRLN 420
Query: 609 YLVQSSLHHVSELYEDILNAVHRF 632
Y+ + V+ELYE++ + +F
Sbjct: 421 YIQIKRIREVAELYEELKTRISQF 444
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 276 (102.2 bits), Expect = 7.1e-20, P = 7.1e-20
Identities = 94/286 (32%), Positives = 137/286 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP--------ILCTQPRRF 79
V R IVE + +RV ++ GETG GKS+QVP FLL + + I+CTQPRR
Sbjct: 574 VFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARKCNIVCTQPRRI 633
Query: 80 XXXXXXXXXXXGRNCE--LGGE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLN 134
CE GG GY I SE +++++ T GVLL ++++ GL
Sbjct: 634 SAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLL 693
Query: 135 ALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF------ 188
A +I+DEVHERSV+SD +DL ++LMSAT D K+ YF
Sbjct: 694 A-DVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPIL 752
Query: 189 RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQ-VTELLGVDHGMTSELSSLR-Y--CS 242
R GR VEV + + T I ++ Y ++ + E + +TS+ ++ Y C
Sbjct: 753 RISGRSYPVEVFHLEDIVEETGFILEKDSEYCQKFLEEEEEITINVTSKAGGIKKYQECI 812
Query: 243 GPSPSMANAEIKPEVHKL---IHDLVLHI--HKNESDIEKSILVFL 283
P S A+ E+ P K VL++ HK D+ +LV+L
Sbjct: 813 -PVQSGASPELSPFYQKYSSRTQYAVLYMNPHKINLDLILELLVYL 857
Score = 274 (101.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 84/274 (30%), Positives = 142/274 (51%)
Query: 218 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLH--IHKNES-- 273
+++ E + V G + ELS A + P HK+ DL+L ++ ++S
Sbjct: 805 IKKYQECIPVQSGASPELSPFYQKYSSRTQYAVLYMNP--HKINLDLILELLVYLDKSPQ 862
Query: 274 --DIEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTE-QALMAMKICKS 326
+IE ++L+FLP ++Q + L+ F+ ++ LHS + T+ QA M
Sbjct: 863 FRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYQLIALHSVLSTQDQAAAFMLPPPG 922
Query: 327 HRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRT 386
RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR
Sbjct: 923 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 982
Query: 387 GRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQKAL 445
GR DG +RL T+ F ++ P I +C K + P+ L KAL
Sbjct: 983 GRVRDGFCFRLYTRERFEGFLEYSVPEILRVPLEE----LCLHIMKCDLGSPEDFLSKAL 1038
Query: 446 DPPYPEVVGDALDLLDHKRALQ----KISPRGRY 475
DPP P+V+ +A++LL A + K++P G++
Sbjct: 1039 DPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQH 1072
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 182 (69.1 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 53/181 (29%), Positives = 82/181 (45%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
V S ++KI+ + + V ++ TG GK++Q+P L I TQPRR
Sbjct: 9 VYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIAVLSV 68
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVIILD 144
G VGY + H +KI T G+LL EM+ L + KY +I++D
Sbjct: 69 SEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLS-KYSIIMVD 127
Query: 145 EVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAIPS 204
E HERS+ D +D R+V+ SAT + + YF + +++ +A P
Sbjct: 128 EAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPV-IKIDAVAYPV 186
Query: 205 T 205
T
Sbjct: 187 T 187
Score = 140 (54.3 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 54/174 (31%), Positives = 81/174 (46%)
Query: 244 PSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEK-SILVFLPTYYALEQQWHLMKPLSSF 302
P + A+ K L+ +V + + + +K +IL+FLP +++ + F
Sbjct: 192 PPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITRLSHERWF 251
Query: 303 FKVHILH-----SSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQ 357
K+ +L S + EQ K RKV++ATNIAE+S+TI V VIDS L
Sbjct: 252 RKLFLLPLYGRLSKEEQEQVFNRAPFGK--RKVVIATNIAETSITIDDVTTVIDS--GLV 307
Query: 358 VFWDVNRKIDSAEL--VWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDH 409
N +A L +SQ+ QRRGR GR G YRL ++ F E +
Sbjct: 308 KLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQREPY 361
>UNIPROTKB|E2RNZ9 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 OMA:INDWFTI EMBL:AAEX03006064
EMBL:AAEX03006065 EMBL:AAEX03006066 Ensembl:ENSCAFT00000029095
Uniprot:E2RNZ9
Length = 1127
Score = 254 (94.5 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 101/360 (28%), Positives = 158/360 (43%)
Query: 146 VHERSVESDXXXXXXXXXXXXXND-LRVVLMSATADITKYRDYFRDLGRGERVEVLAIPS 204
VHER+ + D + ++V+LMSAT + ++ DYF A+P
Sbjct: 1 VHERTEDMDFLLLVVRKLLRTNSRFVKVILMSATINCKEFADYF------------AVPV 48
Query: 205 TNQRT---IFQ---RRVSYLEQVTELLG-VDHGMTSELSSLRYCSGPSPSMANAEIKPEV 257
N+ +F+ + S E + LG + HG S P E+ +
Sbjct: 49 QNKMNPAYVFEVEGKPHSIEEYYLDDLGHIHHGRLSP----HVLEEPVIPKNIYEVAVSL 104
Query: 258 HKLIHDLVLHIHKNES------DIEKS-ILVFLPTYYALEQQWHLMKPL-SSFFKVHILH 309
++ +L + +++ +E+S +LVFLP + L+ + +V+ LH
Sbjct: 105 IQIFDNLDMQESGSKTWSGAQFVLERSSVLVFLPGLGEINYMHELLTNMVHKRLQVYPLH 164
Query: 310 SSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDS 368
SSV E Q + + +RK+IL+TNIAESSVT+P V YVID C + + D + S
Sbjct: 165 SSVTLEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQS 224
Query: 369 AELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXIC 427
L W S++ QR+GR GR G YRLV + F+ ++ DH P + +
Sbjct: 225 LRLSWASKTSCNQRKGRAGRVSKGYCYRLVHRDFWDSSIPDHVIPEMLRCPLGSTVLKVK 284
Query: 428 CAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGR 482
+ + +P+ LL AL PP + + LL AL R P TF GR
Sbjct: 285 LLD---MGEPRALLATALSPPSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGR 341
Score = 71 (30.1 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 599 KIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 632
K E +W LHY+ + V+ELYE++ N + +F
Sbjct: 429 KDELDWGRLHYVQIKRIREVAELYEELKNRISQF 462
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 169 (64.5 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 37/97 (38%), Positives = 59/97 (60%)
Query: 308 LHSSVDTEQALMAMKICKSHRKV-ILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 366
L+S + T+Q + + ++ I+ATN+AE+S+TIP + YV+D RS + ++ +
Sbjct: 776 LYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQENGV 835
Query: 367 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF 403
S E+ WVS++ A QR GR GRT G YRL + + F
Sbjct: 836 QSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVF 872
Score = 159 (61.0 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 50/141 (35%), Positives = 67/141 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL-------LAENMEP--ILCTQPRR 78
V + +I+E V + ++ GETG GK++QVPQFL L ++ P I TQPRR
Sbjct: 445 VFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPGMIGVTQPRR 504
Query: 79 FXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSK-----IVFKTAGVLLDEMRDRGL 133
+ G VGY I + K + F T GVLL EM L
Sbjct: 505 VAAVSMAERVGSELG-DHGHRVGYQIRFDTTIKNEGKENGTALKFMTDGVLLREMMTDFL 563
Query: 134 NALKYKVIILDEVHERSVESD 154
A KY II+DE HER++ +D
Sbjct: 564 LA-KYSAIIIDEAHERNINTD 583
Score = 92 (37.4 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 36/129 (27%), Positives = 51/129 (39%)
Query: 74 TQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSK-----IVFKTAGVLLDEM 128
TQPRR + G VGY I + K + F T GVLL EM
Sbjct: 500 TQPRRVAAVSMAERVGSELG-DHGHRVGYQIRFDTTIKNEGKENGTALKFMTDGVLLREM 558
Query: 129 RDRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXND-----------LRVVLMSA 177
L A KY II+DE HER++ +D L++++MSA
Sbjct: 559 MTDFLLA-KYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLIIMSA 617
Query: 178 TADITKYRD 186
T ++ + +
Sbjct: 618 TLRVSDFSE 626
Score = 37 (18.1 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 31 LREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME 69
L EK+ E ++ + E G GK ++ + + A +E
Sbjct: 113 LLEKLAETKMDTSNFAALKELGKGKQTKKEEMIEALELE 151
Score = 37 (18.1 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 17/76 (22%), Positives = 33/76 (43%)
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDT 314
P+++K + +++ SD ++ +F + Q P+S F + +
Sbjct: 604 PQLYKPLKLIIMSATLRVSDFSENPALFKTPPPIINVQAR-QYPVSIHFNKKTNYDYL-- 660
Query: 315 EQALMAMKICKSHRKV 330
E+A K CK HRK+
Sbjct: 661 EEAFK--KTCKIHRKL 674
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 227 (85.0 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 101/364 (27%), Positives = 158/364 (43%)
Query: 71 ILCTQPRRFXXXXXXXXXXXGRNCELGG-----EVGYHIGHSKHLSERSKIVFKTAGVLL 125
I TQPRR LG +VGY + +S +++ F T G+LL
Sbjct: 213 IAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTSVSPSTRVKFLTEGMLL 272
Query: 126 DEM-RDRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXND------LRVVLMSAT 178
EM D L KY I++DEVHER V D + L+ V+MSAT
Sbjct: 273 QEMLHDPWLT--KYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREGRGGVPLKAVVMSAT 330
Query: 179 ADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSL 238
AD+ +++F + G + L +++ V +++ G + ++
Sbjct: 331 ADMESLQEFFVE---GYKARELQKEEKSEKDGIA--VCHIK----------GRQFPVKTI 375
Query: 239 RYCSGPSPSMANAEIKP--EVH---KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQW 293
Y P +A +K ++H + D+++ + E+ +E L L YA
Sbjct: 376 -YSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQET-VEA--LENLVNEYATG--- 428
Query: 294 HLMKPLSSFFKVHILHSSVDTEQALMAMKICKSH---RKVILATNIAESSVTIPKVAYVI 350
M P S K+ +L QA + RK+ILATNIAE+SVT+ V YV+
Sbjct: 429 --MDP--SLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAETSVTVSGVRYVV 484
Query: 351 DSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHE 410
D ++ + +DS + +S+S A QR+GR GR GQ YRL T+ + L++
Sbjct: 485 DCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEKDYLALDEVN 544
Query: 411 CPAI 414
P I
Sbjct: 545 TPEI 548
Score = 93 (37.8 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 33 EKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAEN 67
++I + + +N V L++GETG GKS+Q+PQFL+ E+
Sbjct: 154 DEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVDES 188
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 269 (99.8 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 82/274 (29%), Positives = 144/274 (52%)
Query: 218 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHI--HKNES-- 273
+++ E + V G +++L+ Y S + +A + HK+ DL+L + + + S
Sbjct: 802 IKKYQEYIPVQTGTSADLNPF-YQKYSSRTQ-HAILYMNPHKINLDLILELLTYLDRSPQ 859
Query: 274 --DIEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKIC-KS 326
++E ++L+FLP ++Q + L+ FF KV LHS + T+ A + +
Sbjct: 860 FKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQG 919
Query: 327 HRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRT 386
RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR
Sbjct: 920 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 979
Query: 387 GRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQKAL 445
GR DG +R+ T+ F D+ P I +C K + P+ L KAL
Sbjct: 980 GRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLSKAL 1035
Query: 446 DPPYPEVVGDALDLLDHKRALQ----KISPRGRY 475
DPP +V+ +A++LL A + K++P G++
Sbjct: 1036 DPPQLQVISNAMNLLRKIGACELNEPKLTPLGQH 1069
Score = 263 (97.6 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 85/285 (29%), Positives = 136/285 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM--E------PILCTQPRRF 79
V R +VE + +RV ++ GETG GKS+QVP FLL + + E I+CTQPRR
Sbjct: 571 VFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTTKCNIVCTQPRRI 630
Query: 80 XXXXXXXXXXXGRNCELG--GE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLN 134
CE G G+ GY I SE +++++ T GVLL ++++ GL
Sbjct: 631 SAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGL- 689
Query: 135 ALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF------ 188
+I+DEVHERSV+SD +DL ++LMSAT D K+ YF
Sbjct: 690 LTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDCEKFSTYFTHCPIL 749
Query: 189 RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQ-VTELLGVDHGMTSELSSLRYCSG-- 243
R GR VEV + + T + ++ Y ++ + E + +T++ ++
Sbjct: 750 RISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTTKAGGIKKYQEYI 809
Query: 244 PSPSMANAEIKPEVHKLI----HDLV-LHIHKNESDIEKSILVFL 283
P + +A++ P K H ++ ++ HK D+ +L +L
Sbjct: 810 PVQTGTSADLNPFYQKYSSRTQHAILYMNPHKINLDLILELLTYL 854
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 190 (71.9 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 52/165 (31%), Positives = 80/165 (48%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL--AENMEPILC-TQPRRFXXXXX 84
V R +I E + +N+V ++ GETG GK++Q+P+ L ++ + TQPRR
Sbjct: 76 VSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQGYIGHTQPRRIAARSV 135
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIIL 143
LG VGY + S I T G+LL E + DR L+ +Y +I+
Sbjct: 136 AARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLD--QYDTLIV 193
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ D +DL++V+ SAT D ++ +F
Sbjct: 194 DEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHF 238
Score = 138 (53.6 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 59/232 (25%), Positives = 100/232 (43%)
Query: 238 LRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWH-LM 296
+RY S + E + + I D V +H+ + IL+FL + L
Sbjct: 255 IRYRPPDSAEEESDETERGEQQAILDAVDELHRENTG---DILIFLSGEREIRDTAESLR 311
Query: 297 KPLSSFFKVHILHSSVDTEQALMAMKICKSH--RKVILATNIAESSVTIPKVAYVIDSCR 354
K + +V L+S + + KI K H R+++LATN+AE+S+T+P + VID+
Sbjct: 312 KHHPADCEVLPLYSRLTVSEQ---EKIFKPHGRRRIVLATNVAETSLTVPGIRGVIDAGY 368
Query: 355 SLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 414
+ + K+ + +S++ A QR GR GR G RL ++ F + P I
Sbjct: 369 ARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQDFLNRPEFTDPEI 428
Query: 415 XXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL 466
+ KA++ + + ++PP +V D L L AL
Sbjct: 429 LRTNLAAVIL-----QMKALNLGDIRVFPFVEPPDERLVRDGLRTLQEINAL 475
Score = 45 (20.9 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 565 FQFWQHVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEW---CSLHYL 610
FQ + F K R + + + ++V A + +IE EW C H L
Sbjct: 647 FQIFPGSFLFKTRPVWIISAEQVETSRVYARTVARIEPEWIEKCGAHLL 695
>UNIPROTKB|Q9KUC1 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 162 (62.1 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 46/139 (33%), Positives = 75/139 (53%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVD--TEQALMAMK 322
+ H+ ++E+ S+L FLP ++ Q + L+S ++ L+ ++ +Q +A
Sbjct: 204 IRHLLQHETG---SLLAFLPGAASINQLTEQLSDLASEVEICPLYGQMEFAAQQRAIA-P 259
Query: 323 ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQR 382
RKV+LATNIAE+S+TI + V+DS +D+ I E V ++QS AEQR
Sbjct: 260 TAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQR 319
Query: 383 RGRTGRTCDGQVYRLVTKS 401
GR GR G RL +++
Sbjct: 320 AGRAGRLEPGICVRLYSEA 338
Score = 157 (60.3 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 51/206 (24%), Positives = 88/206 (42%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVP-QFLLAENME-PILCTQPRRFXXXXXX 85
++ + K++ + + ++ G GKS+ P Q L A I+ +PRR
Sbjct: 6 IIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGKIIMLEPRRLAARNIA 65
Query: 86 XXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIILD 144
E+G VGY + +S +++ T G++ ++ D L+ + V+I D
Sbjct: 66 RYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVD--VLIFD 123
Query: 145 EVHERSVESDXXXXXXXXXXXXXN-DLRVVLMSATAD------ITKYRDYFRDLGRGERV 197
E HERS+ +D DL++V+MSAT D + Y GRG +
Sbjct: 124 EFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFPI 183
Query: 198 EVLAIPSTNQR---TIFQRRVSYLEQ 220
E+ P + T QR++ +L Q
Sbjct: 184 EIRYQPLRSDEPLVTAMQRQIRHLLQ 209
>TIGR_CMR|VC_0601 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 162 (62.1 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 46/139 (33%), Positives = 75/139 (53%)
Query: 265 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVD--TEQALMAMK 322
+ H+ ++E+ S+L FLP ++ Q + L+S ++ L+ ++ +Q +A
Sbjct: 204 IRHLLQHETG---SLLAFLPGAASINQLTEQLSDLASEVEICPLYGQMEFAAQQRAIA-P 259
Query: 323 ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQR 382
RKV+LATNIAE+S+TI + V+DS +D+ I E V ++QS AEQR
Sbjct: 260 TAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQR 319
Query: 383 RGRTGRTCDGQVYRLVTKS 401
GR GR G RL +++
Sbjct: 320 AGRAGRLEPGICVRLYSEA 338
Score = 157 (60.3 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 51/206 (24%), Positives = 88/206 (42%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVP-QFLLAENME-PILCTQPRRFXXXXXX 85
++ + K++ + + ++ G GKS+ P Q L A I+ +PRR
Sbjct: 6 IIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGKIIMLEPRRLAARNIA 65
Query: 86 XXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DRGLNALKYKVIILD 144
E+G VGY + +S +++ T G++ ++ D L+ + V+I D
Sbjct: 66 RYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVD--VLIFD 123
Query: 145 EVHERSVESDXXXXXXXXXXXXXN-DLRVVLMSATAD------ITKYRDYFRDLGRGERV 197
E HERS+ +D DL++V+MSAT D + Y GRG +
Sbjct: 124 EFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFPI 183
Query: 198 EVLAIPSTNQR---TIFQRRVSYLEQ 220
E+ P + T QR++ +L Q
Sbjct: 184 EIRYQPLRSDEPLVTAMQRQIRHLLQ 209
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 267 (99.0 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 87/285 (30%), Positives = 136/285 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM--E------PILCTQPRRF 79
V R IVE + +RV ++ GETG GKS+QVP FLL + + E I+CTQPRR
Sbjct: 571 VFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRI 630
Query: 80 XXXXXXXXXXXGRNCELG--GE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLN 134
CE G G GY I SE +++++ T GVLL ++++ GL
Sbjct: 631 SAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGL- 689
Query: 135 ALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF------ 188
+I+DEVHERSV+SD +DL ++LMSAT D K+ YF
Sbjct: 690 LTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPIL 749
Query: 189 RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQ-VTELLGVDHGMTSELSSLRYCSG-- 243
R GR VEV + + T + ++ Y ++ + E + +TS+ ++
Sbjct: 750 RISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGIKKHQEYI 809
Query: 244 PSPSMANAEIKPEVHKLIHD-----LVLHIHKNESDIEKSILVFL 283
P + ++A++ P K + L ++ HK D+ +L++L
Sbjct: 810 PVNTGSSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLIYL 854
Score = 264 (98.0 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 79/250 (31%), Positives = 131/250 (52%)
Query: 223 ELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLH--IHKNES----DIE 276
E + V+ G +++L+ + S +A + HK+ DL+L I+ + S +IE
Sbjct: 807 EYIPVNTGSSADLNP--FYQKYSNRTQHAILYMNPHKINLDLILELLIYLDRSPQFRNIE 864
Query: 277 KSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKICKSH-RKVI 331
++L+FLP ++Q + L+ FF KV LHS + T+ A + RK++
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIV 924
Query: 332 LATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCD 391
LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR GR D
Sbjct: 925 LATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRD 984
Query: 392 GQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQKALDPPYP 450
G +R+ T+ F D+ P I +C K + P+ L KALDPP
Sbjct: 985 GFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLSKALDPPQL 1040
Query: 451 EVVGDALDLL 460
+V+ +A++LL
Sbjct: 1041 QVISNAMNLL 1050
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 267 (99.0 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 88/285 (30%), Positives = 137/285 (48%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM----EP----ILCTQPRRF 79
V R+ IVE + +RV ++ GETG GKS+QVP FLL + + E I+CTQPRR
Sbjct: 574 VFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIVCTQPRRI 633
Query: 80 XXXXXXXXXXXGRNCELG--GE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLN 134
CE G G GY I E +++++ T GVLL ++++ GL
Sbjct: 634 SAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKLQEDGLL 693
Query: 135 ALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF------ 188
+ +I+DEVHERSV+SD +DL ++LMSAT D K+ YF
Sbjct: 694 S-NVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPIL 752
Query: 189 RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQ-VTELLGVDHGMTSELSSLRYCSG-- 243
R GR VEV + + T + ++ Y ++ + E V +TS+ ++
Sbjct: 753 RISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEVTINVTSKAGGIKKYQEYI 812
Query: 244 PSPSMANAEIKPEVHKLI----HDLV-LHIHKNESDIEKSILVFL 283
P + A+A++ P K H ++ ++ HK D+ +L +L
Sbjct: 813 PVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLDLILELLAYL 857
Score = 262 (97.3 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 82/274 (29%), Positives = 143/274 (52%)
Query: 218 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHI--HKNES-- 273
+++ E + V G ++L+ Y S + +A + HK+ DL+L + + ++S
Sbjct: 805 IKKYQEYIPVQTGAHADLNPF-YQKYSSRTQ-HAILYMNPHKINLDLILELLAYLDKSPQ 862
Query: 274 --DIEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKICKSH 327
+IE ++L+FLP ++Q + L+ F+ KV LHS + T+ A +
Sbjct: 863 FRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPG 922
Query: 328 -RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRT 386
RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR
Sbjct: 923 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 982
Query: 387 GRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQKAL 445
GR DG +R+ T+ F D+ P I +C K + P+ L KAL
Sbjct: 983 GRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLSKAL 1038
Query: 446 DPPYPEVVGDALDLLDHKRALQ----KISPRGRY 475
DPP +V+ +A++LL A + K++P G++
Sbjct: 1039 DPPQLQVISNAMNLLRKIGACELNEPKLTPLGQH 1072
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 267 (99.0 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 87/285 (30%), Positives = 136/285 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM--E------PILCTQPRRF 79
V R IVE + +RV ++ GETG GKS+QVP FLL + + E I+CTQPRR
Sbjct: 571 VFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRI 630
Query: 80 XXXXXXXXXXXGRNCELG--GE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLN 134
CE G G GY I SE +++++ T GVLL ++++ GL
Sbjct: 631 SAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGL- 689
Query: 135 ALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF------ 188
+I+DEVHERSV+SD +DL ++LMSAT D K+ YF
Sbjct: 690 LTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPIL 749
Query: 189 RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQ-VTELLGVDHGMTSELSSLRYCSG-- 243
R GR VEV + + T + ++ Y ++ + E + +TS+ ++
Sbjct: 750 RISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGIKKHQEYI 809
Query: 244 PSPSMANAEIKPEVHKLIHD-----LVLHIHKNESDIEKSILVFL 283
P + ++A++ P K + L ++ HK D+ +L++L
Sbjct: 810 PVNTGSSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLIYL 854
Score = 254 (94.5 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 79/253 (31%), Positives = 129/253 (50%)
Query: 223 ELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLH--IHKNESD------ 274
E + V+ G +++L+ + S +A + HK+ DL+L I+ D
Sbjct: 807 EYIPVNTGSSADLNP--FYQKYSNRTQHAILYMNPHKINLDLILELLIYLEIPDRSPQFR 864
Query: 275 -IEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKICKSH-R 328
IE ++L+FLP ++Q + L+ FF KV LHS + T+ A + R
Sbjct: 865 NIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVR 924
Query: 329 KVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGR 388
K++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR GR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 389 TCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQKALDP 447
DG +R+ T+ F D+ P I +C K + P+ L KALDP
Sbjct: 985 VRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLSKALDP 1040
Query: 448 PYPEVVGDALDLL 460
P +V+ +A++LL
Sbjct: 1041 PQLQVISNAMNLL 1053
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 225 (84.3 bits), Expect = 8.3e-19, Sum P(2) = 8.3e-19
Identities = 88/327 (26%), Positives = 146/327 (44%)
Query: 98 GEVGYHIGHSKHLSERSKIVFKTAGVLLDEM-RDRGLNALKYKVIILDEVHERSVESDXX 156
G VGY + ++ + +KI F T G+LL E+ D L +Y +++DEVHER ++ D
Sbjct: 223 GLVGYSVRFDHNVPKGTKIKFLTEGMLLQELLHDPSLR--QYSAVVVDEVHERGIDVDLL 280
Query: 157 XXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDLGRGER-VEVLAIPSTNQRTIFQRRV 215
L+ +L+S GRG ++V+A+ +T +
Sbjct: 281 CGF----------LKQMLLSPDKP-----------GRGGLPLKVVAMSATANIETLENFF 319
Query: 216 SYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDI 275
S + + G + + P + + + P + + V IH E +
Sbjct: 320 SIPQDDRKAKAESDGKAEQTLKIEGRQFPVEIIHSPKPVPVLADEVVKTVFKIHCGEP-L 378
Query: 276 EKSILVFLPTYYALEQQWHLMKPLSSFFKVHI-------LHSSVDTEQALMAMKICKSH- 327
ILVFL +E+ L++ ++ + L + E A + K
Sbjct: 379 PGDILVFLYGQEPIEEIQRLIEEYAATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRV 438
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RKV+LATNIAE+SVT+P V YVID+ +S + + ++S + +S+S A QR GR G
Sbjct: 439 RKVVLATNIAETSVTVPGVRYVIDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAG 498
Query: 388 RTCDGQVYRLVTKSFFGTLEDHECPAI 414
R G+ YRL T+ + + D + P I
Sbjct: 499 REAPGKCYRLYTEDVYKEMRDADLPEI 525
Score = 90 (36.7 bits), Expect = 8.3e-19, Sum P(2) = 8.3e-19
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 35 IVEKVLENRVTLIVGETGCGKSSQVPQFLLAE 66
I E + +N V ++VGETG GKS+QVPQFL E
Sbjct: 126 IREHLRKNDVLILVGETGSGKSTQVPQFLADE 157
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 266 (98.7 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 87/285 (30%), Positives = 135/285 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM--E------PILCTQPRRF 79
V R IVE + +RV ++ GETG GKS+QVP FLL + + E I+CTQPRR
Sbjct: 571 VFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRI 630
Query: 80 XXXXXXXXXXXGRNCELG--GE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLN 134
CE G G+ GY I SE +++++ T GVLL ++++ GL
Sbjct: 631 SAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGL- 689
Query: 135 ALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF------ 188
+I+DEVHERSV+SD +DL ++LMSAT D K+ YF
Sbjct: 690 LTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPIL 749
Query: 189 RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQ-VTELLGVDHGMTSELSSLRYCSG-- 243
R GR VEV + + T + ++ Y ++ + E + +TS+ ++
Sbjct: 750 RISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGIKKYQEYI 809
Query: 244 PSPSMANAEIKPEVHKLIHD-----LVLHIHKNESDIEKSILVFL 283
P + +A++ P K + L ++ HK D+ +L +L
Sbjct: 810 PVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYL 854
Score = 258 (95.9 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 81/277 (29%), Positives = 141/277 (50%)
Query: 218 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHI--HKNESD- 274
+++ E + V G +++L+ + S +A + HK+ DL+L + + +D
Sbjct: 802 IKKYQEYIPVQTGTSADLNP--FYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDR 859
Query: 275 ------IEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKIC 324
+E ++L+FLP ++Q + L+ FF KV LHS + T+ A +
Sbjct: 860 SPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLP 919
Query: 325 -KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRR 383
+ RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+
Sbjct: 920 PQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 384 GRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQ 442
GR GR DG +R+ T+ F D+ P I +C K + P+ L
Sbjct: 980 GRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLS 1035
Query: 443 KALDPPYPEVVGDALDLLDHKRALQ----KISPRGRY 475
KALDPP +V+ +A+ LL A + K++P G++
Sbjct: 1036 KALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQH 1072
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 266 (98.7 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 87/285 (30%), Positives = 135/285 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM--E------PILCTQPRRF 79
V R IVE + +RV ++ GETG GKS+QVP FLL + + E I+CTQPRR
Sbjct: 571 VFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRI 630
Query: 80 XXXXXXXXXXXGRNCELG--GE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLN 134
CE G G+ GY I SE +++++ T GVLL ++++ GL
Sbjct: 631 SAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGL- 689
Query: 135 ALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF------ 188
+I+DEVHERSV+SD +DL ++LMSAT D K+ YF
Sbjct: 690 LTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPIL 749
Query: 189 RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQ-VTELLGVDHGMTSELSSLRYCSG-- 243
R GR VEV + + T + ++ Y ++ + E + +TS+ ++
Sbjct: 750 RISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGIKKYQEYI 809
Query: 244 PSPSMANAEIKPEVHKLIHD-----LVLHIHKNESDIEKSILVFL 283
P + +A++ P K + L ++ HK D+ +L +L
Sbjct: 810 PVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYL 854
Score = 258 (95.9 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 81/277 (29%), Positives = 141/277 (50%)
Query: 218 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHI--HKNESD- 274
+++ E + V G +++L+ + S +A + HK+ DL+L + + +D
Sbjct: 802 IKKYQEYIPVQTGTSADLNP--FYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDR 859
Query: 275 ------IEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKIC 324
+E ++L+FLP ++Q + L+ FF KV LHS + T+ A +
Sbjct: 860 SPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLP 919
Query: 325 -KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRR 383
+ RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+
Sbjct: 920 PQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 384 GRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQ 442
GR GR DG +R+ T+ F D+ P I +C K + P+ L
Sbjct: 980 GRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLS 1035
Query: 443 KALDPPYPEVVGDALDLLDHKRALQ----KISPRGRY 475
KALDPP +V+ +A+ LL A + K++P G++
Sbjct: 1036 KALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQH 1072
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 266 (98.7 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 87/285 (30%), Positives = 135/285 (47%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM--E------PILCTQPRRF 79
V R IVE + +RV ++ GETG GKS+QVP FLL + + E I+CTQPRR
Sbjct: 571 VFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRI 630
Query: 80 XXXXXXXXXXXGRNCELG--GE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLN 134
CE G G+ GY I SE +++++ T GVLL ++++ GL
Sbjct: 631 SAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGL- 689
Query: 135 ALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF------ 188
+I+DEVHERSV+SD +DL ++LMSAT D K+ YF
Sbjct: 690 LTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPIL 749
Query: 189 RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQ-VTELLGVDHGMTSELSSLRYCSG-- 243
R GR VEV + + T + ++ Y ++ + E + +TS+ ++
Sbjct: 750 RISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGIKKYQEYI 809
Query: 244 PSPSMANAEIKPEVHKLIHD-----LVLHIHKNESDIEKSILVFL 283
P + +A++ P K + L ++ HK D+ +L +L
Sbjct: 810 PVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYL 854
Score = 258 (95.9 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 81/277 (29%), Positives = 141/277 (50%)
Query: 218 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHI--HKNESD- 274
+++ E + V G +++L+ + S +A + HK+ DL+L + + +D
Sbjct: 802 IKKYQEYIPVQTGTSADLNP--FYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDR 859
Query: 275 ------IEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKIC 324
+E ++L+FLP ++Q + L+ FF KV LHS + T+ A +
Sbjct: 860 SPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLP 919
Query: 325 -KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRR 383
+ RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+
Sbjct: 920 PQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 384 GRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQ 442
GR GR DG +R+ T+ F D+ P I +C K + P+ L
Sbjct: 980 GRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLS 1035
Query: 443 KALDPPYPEVVGDALDLLDHKRALQ----KISPRGRY 475
KALDPP +V+ +A+ LL A + K++P G++
Sbjct: 1036 KALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQH 1072
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 279 (103.3 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 88/284 (30%), Positives = 138/284 (48%)
Query: 30 SLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRFXXXXX 84
+ RE+++ V +++V ++ GETGCGKS+QVP FLL + I CT+PRR
Sbjct: 695 AFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQGKACKIYCTEPRRISAISL 754
Query: 85 XXXXXX----GRNCELGGE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALK 137
GRN +LG VGY I + S +++VF T G+++ + G N L+
Sbjct: 755 ARRVSEELGEGRN-DLGTSRSLVGYSIRLEANTSRETRLVFATTGIVMRMLE--GSNDLR 811
Query: 138 -YKVIILDEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL----- 191
++LDEVHERS++SD DL+VVLMSAT D ++ +Y
Sbjct: 812 DITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVDADRFSNYLDGAPVLNV 871
Query: 192 -GRGERVEVLAIPSTNQRTIF--QRRVSY--LEQVTELLGVDHGMTSELSSLRYCSGPSP 246
GR V+V + + T + ++V L ++ E V+ +S+ L+ G S
Sbjct: 872 PGRTFPVQVNFLEDAVELTGYTIDQKVPQERLVEIDEDAEVEPESSSKTELLKSLKGYST 931
Query: 247 SMANAEIKPEVHKLIHDLVLHI------HKNESDIEKSILVFLP 284
N + + +K+ DL++ + N D K+ILVFLP
Sbjct: 932 RTRNTLAQMDEYKIDFDLIVQLISRIASDPNYQDYSKAILVFLP 975
Score = 242 (90.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 79/271 (29%), Positives = 131/271 (48%)
Query: 218 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHI------HKN 271
L ++ E V+ +S+ L+ G S N + + +K+ DL++ + N
Sbjct: 903 LVEIDEDAEVEPESSSKTELLKSLKGYSTRTRNTLAQMDEYKIDFDLIVQLISRIASDPN 962
Query: 272 ESDIEKSILVFLPTYYALEQQWHLMKPLSSF---FKVHILHSSVDTEQALMAMKICKSH- 327
D K+ILVFLP + L+ SF + V+ LHS++ TE+ A + H
Sbjct: 963 YQDYSKAILVFLPGIAEIRTLNDLLLGDRSFQQNWLVYPLHSTIATEEQEAAFLV-PPHG 1021
Query: 328 -RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRT 386
RK++LATNIAE+ +TIP V VID+ + ++ +D R++ ++S++ A+QRRGR
Sbjct: 1022 MRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRA 1081
Query: 387 GRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKAL 445
GR G + + TK + D + P + + + I + L KAL
Sbjct: 1082 GRVQQGLCFHMFTKYRHDAIMADQQTPEMLRLSLQDLAIRVKICKIGGIEET---LSKAL 1138
Query: 446 DPPYPEVVGDALDLLDHKRAL---QKISPRG 473
DPP + + A+D L RAL + ++P G
Sbjct: 1139 DPPSAKNIRRAIDALIDVRALTQGEDLTPLG 1169
Score = 38 (18.4 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 601 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFL 637
E ++C ++L Q +L ++ +L +L V KFL
Sbjct: 1258 EFQFCRKNFLSQQTLANIEDLKGQLL--VSLVDSKFL 1292
Score = 37 (18.1 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 925 IRMLADALYDTRVIITMNNIKFAQLQVEKLARDSF 959
IR DAL D R + ++ Q+ +L D F
Sbjct: 1146 IRRAIDALIDVRALTQGEDLTPLGNQLARLPLDVF 1180
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 165 (63.1 bits), Expect = 8.7e-18, Sum P(2) = 8.7e-18
Identities = 51/176 (28%), Positives = 86/176 (48%)
Query: 299 LSSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQ 357
L++ + + +LHS++ E Q + + RK IL+TN+AE+SVTI + +VIDS +
Sbjct: 317 LTNGWIILMLHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNL 376
Query: 358 VFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX 417
+ + WVS++ A QR+GR GRT G YRL ++ F ++D I
Sbjct: 377 IKHEPGTGTQKLTEFWVSKASANQRKGRAGRTGPGICYRLYSQEQFEKMDDFTVSEINRV 436
Query: 418 XXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRG 473
+ DP+ ++ P +V+ + L++L +R L+ S RG
Sbjct: 437 SLQEMALKMISLNLGL--DPRTF--PFIEKPSEDVLNEGLEVLKFQRVLR--SDRG 486
Score = 145 (56.1 bits), Expect = 8.7e-18, Sum P(2) = 8.7e-18
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 111 SERSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESDXXXXXXXXXXXXXNDL 170
S+++K++F T G+LL +M L KY VIILDEVHER + SD +DL
Sbjct: 158 SQKTKLLFLTEGLLLRQMEKDSLLE-KYNVIILDEVHERHLTSDLLIGLLRDLCTKRDDL 216
Query: 171 RVVLMSATADITKYRDYF 188
+++LMSAT ++ ++ YF
Sbjct: 217 KLILMSATINLDLFKGYF 234
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 8/56 (14%), Positives = 24/56 (42%)
Query: 285 TYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESS 340
T ++ ++W L K + + + +D + K+ +R+++ + E +
Sbjct: 562 TLISIFREWVLQKAFEGTARRWTMENGIDEHRLYEISKLRAQYRQILEDAGLVEKA 617
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 232 (86.7 bits), Expect = 8.9e-18, Sum P(3) = 8.9e-18
Identities = 63/204 (30%), Positives = 101/204 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ +++++++ + +N + ++VGETG GK++Q+ Q+L + I CTQPRR
Sbjct: 537 IFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSV 596
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
LG EVGY I SE + I + T G+LL E +R+ L+ Y II+
Sbjct: 597 AKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLD--NYSAIIM 654
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGERV 197
DE HERS+ +D +DL++V+ SAT D K+ +F ++ GR V
Sbjct: 655 DEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPV 714
Query: 198 EVLAIPSTNQRTIFQRRVSYLEQV 221
++L T Q + V QV
Sbjct: 715 DIL-FSKTPQEDYVEAAVKQALQV 737
Score = 86 (35.3 bits), Expect = 8.9e-18, Sum P(3) = 8.9e-18
Identities = 31/94 (32%), Positives = 48/94 (51%)
Query: 266 LHIHKNESDIEKSILVFLPTYYALE-QQWHLMKPLSSFFKVHIL-----HSSVDTE-QAL 318
L +H S ILVF+P +E +++ L K L +S + ++ QA
Sbjct: 735 LQVHL--SGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAK 792
Query: 319 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS 352
+ K RK I+ATNIAE+S+T+ + +VIDS
Sbjct: 793 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 826
Score = 39 (18.8 bits), Expect = 8.9e-18, Sum P(3) = 8.9e-18
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 604 WCSLHYLVQSSLHHVSEL 621
WC+ H++ ++ V E+
Sbjct: 964 WCNQHFIHAKAMRKVREV 981
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 232 (86.7 bits), Expect = 9.1e-18, Sum P(3) = 9.1e-18
Identities = 63/204 (30%), Positives = 101/204 (49%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ +++++++ + +N + ++VGETG GK++Q+ Q+L + I CTQPRR
Sbjct: 540 IFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSV 599
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
LG EVGY I SE + I + T G+LL E +R+ L+ Y II+
Sbjct: 600 AKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLD--NYSAIIM 657
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYFRDL------GRGERV 197
DE HERS+ +D +DL++V+ SAT D K+ +F ++ GR V
Sbjct: 658 DEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPV 717
Query: 198 EVLAIPSTNQRTIFQRRVSYLEQV 221
++L T Q + V QV
Sbjct: 718 DIL-FSKTPQEDYVEAAVKQALQV 740
Score = 86 (35.3 bits), Expect = 9.1e-18, Sum P(3) = 9.1e-18
Identities = 31/94 (32%), Positives = 48/94 (51%)
Query: 266 LHIHKNESDIEKSILVFLPTYYALE-QQWHLMKPLSSFFKVHIL-----HSSVDTE-QAL 318
L +H S ILVF+P +E +++ L K L +S + ++ QA
Sbjct: 738 LQVHL--SGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAK 795
Query: 319 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS 352
+ K RK I+ATNIAE+S+T+ + +VIDS
Sbjct: 796 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 829
Score = 39 (18.8 bits), Expect = 9.1e-18, Sum P(3) = 9.1e-18
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 604 WCSLHYLVQSSLHHVSEL 621
WC+ H++ ++ V E+
Sbjct: 970 WCNQHFIHAKAMRKVREV 987
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 171 (65.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 45/134 (33%), Positives = 71/134 (52%)
Query: 328 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 387
RK +++TNI+ +S+TI + YV+D Q+ + +D E+V +S+S+A QR GR G
Sbjct: 291 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 350
Query: 388 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 446
RT G+ +R+ +K F+ + DH P I + C AI D V+ LD
Sbjct: 351 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCL---AIHD--VIRFPYLD 405
Query: 447 PPYPEVVGDALDLL 460
PP ++ +AL L
Sbjct: 406 PPNERLILEALKQL 419
Score = 134 (52.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 37/120 (30%), Positives = 54/120 (45%)
Query: 74 TQPRRFXXXXXXXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGL 133
TQPR+ C LG +VGY + S+ + I + T G LL +
Sbjct: 5 TQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDP- 63
Query: 134 NALKYKVIILDEVHERSVESDXXXXXXXXXXXXXND-----LRVVLMSATADITKYRDYF 188
N K+ VIILDE HER++ +D + L+VV+MSAT ++ K +F
Sbjct: 64 NLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF 123
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 228 (85.3 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 53/165 (32%), Positives = 87/165 (52%)
Query: 28 VMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFXXXXX 84
+ +++++++ + +N + ++VGETG GK++Q+ Q+L + I CTQPRR
Sbjct: 534 IFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSV 593
Query: 85 XXXXXXGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKVIIL 143
LG EVGY I SE + I + T G+LL E +R+ L+ Y II+
Sbjct: 594 AKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLD--HYSAIIM 651
Query: 144 DEVHERSVESDXXXXXXXXXXXXXNDLRVVLMSATADITKYRDYF 188
DE HERS+ +D +DL++++ SAT D K+ +F
Sbjct: 652 DEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFF 696
Score = 88 (36.0 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 57/201 (28%), Positives = 93/201 (46%)
Query: 266 LHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL--HSSVDTE-QAL 318
L +H S IL+F+P +E Q ++ L + + +L +S + ++ QA
Sbjct: 732 LQVHL--SGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAK 789
Query: 319 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKIDSAELVWVSQ 376
+ K RK I+ATNIAE+S+T+ + +VIDS C+ L+V + + ++L + +
Sbjct: 790 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK-LKVS---SPSLGGSDLK-IME 844
Query: 377 SQAEQRRGRTGRTCDG----QVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAES 431
Q Q+ TG C G + RL T+S + L P I + +S
Sbjct: 845 IQKIQKNINTG--CSGCTSPRCCRLYTQSAYKNELLTTTVPEIQRTNLANV---VLLLKS 899
Query: 432 KAISDPKVLLQ-KALDPPYPE 451
+ D LLQ +DPP PE
Sbjct: 900 LGVQD---LLQFHFMDPP-PE 916
Score = 37 (18.1 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 604 WCSLHYLVQSSLHHVSEL 621
WC+ H++ ++ V E+
Sbjct: 1026 WCNDHFIHAKAMRKVREV 1043
WARNING: HSPs involving 76 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1020 944 0.00093 122 3 11 22 0.37 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 326
No. of states in DFA: 626 (67 KB)
Total size of DFA: 469 KB (2220 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 76.50u 0.10s 76.60t Elapsed: 00:00:04
Total cpu time: 76.56u 0.10s 76.66t Elapsed: 00:00:04
Start: Tue May 21 22:20:25 2013 End: Tue May 21 22:20:29 2013
WARNINGS ISSUED: 2