Query 001730
Match_columns 1019
No_of_seqs 300 out of 3198
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 07:57:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001730.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001730hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0959 N-arginine dibasic con 100.0 8E-121 2E-125 1053.3 90.5 946 1-1019 5-966 (974)
2 COG1025 Ptr Secreted/periplasm 100.0 6E-119 1E-123 1015.5 93.4 921 10-1014 10-935 (937)
3 PRK15101 protease3; Provisiona 100.0 1E-110 3E-115 1057.6 107.1 921 11-1015 31-957 (961)
4 PTZ00432 falcilysin; Provision 100.0 3E-60 6.5E-65 586.9 67.3 840 98-993 115-1110(1119)
5 TIGR02110 PQQ_syn_pqqF coenzym 100.0 1.1E-56 2.3E-61 519.5 64.4 678 25-891 1-695 (696)
6 COG1026 Predicted Zn-dependent 100.0 2.9E-54 6.3E-59 491.5 55.1 836 98-989 42-961 (978)
7 KOG2019 Metalloendoprotease HM 100.0 2.6E-53 5.6E-58 454.1 51.6 834 106-988 78-987 (998)
8 COG0612 PqqL Predicted Zn-depe 100.0 9.1E-47 2E-51 433.9 34.4 411 17-499 11-431 (438)
9 KOG0960 Mitochondrial processi 100.0 1.8E-45 3.9E-50 372.1 30.0 408 21-499 31-449 (467)
10 KOG0961 Predicted Zn2+-depende 100.0 9.1E-38 2E-42 334.5 47.2 832 98-971 41-972 (1022)
11 KOG2067 Mitochondrial processi 100.0 3.9E-38 8.3E-43 319.5 25.0 397 23-498 24-443 (472)
12 COG0612 PqqL Predicted Zn-depe 100.0 9.5E-31 2E-35 301.1 34.2 407 570-990 18-435 (438)
13 KOG2583 Ubiquinol cytochrome c 99.9 1.8E-23 3.9E-28 214.1 32.0 391 24-499 23-420 (429)
14 PRK15101 protease3; Provisiona 99.9 3.9E-24 8.4E-29 271.1 28.3 395 23-498 522-927 (961)
15 TIGR02110 PQQ_syn_pqqF coenzym 99.9 5.1E-22 1.1E-26 231.3 32.5 330 572-915 3-348 (696)
16 KOG0960 Mitochondrial processi 99.9 4.6E-21 9.9E-26 195.6 29.9 404 572-995 37-458 (467)
17 PF00675 Peptidase_M16: Insuli 99.9 3.9E-22 8.4E-27 193.0 13.6 137 98-235 12-148 (149)
18 KOG2067 Mitochondrial processi 99.9 1.2E-19 2.6E-24 185.5 27.8 401 572-995 28-453 (472)
19 PF05193 Peptidase_M16_C: Pept 99.8 1.1E-18 2.5E-23 176.3 17.1 178 248-433 2-184 (184)
20 PTZ00432 falcilysin; Provision 99.8 5E-17 1.1E-21 202.9 35.2 405 572-986 95-575 (1119)
21 PF05193 Peptidase_M16_C: Pept 99.6 4.6E-15 9.9E-20 149.8 17.1 180 726-913 1-184 (184)
22 COG1026 Predicted Zn-dependent 99.3 7.2E-10 1.6E-14 129.3 27.5 390 574-987 27-460 (978)
23 COG1025 Ptr Secreted/periplasm 99.2 1.5E-08 3.4E-13 118.0 32.4 402 568-988 23-443 (937)
24 KOG2583 Ubiquinol cytochrome c 99.1 3.6E-07 7.9E-12 95.4 32.1 378 574-989 28-423 (429)
25 KOG2019 Metalloendoprotease HM 99.1 1.1E-07 2.5E-12 104.9 27.8 391 572-987 57-497 (998)
26 KOG0959 N-arginine dibasic con 99.0 2.4E-07 5.2E-12 110.4 31.0 319 568-895 27-361 (974)
27 KOG0961 Predicted Zn2+-depende 98.6 5.1E-06 1.1E-10 92.1 22.5 308 647-969 100-444 (1022)
28 PF00675 Peptidase_M16: Insuli 98.6 4.5E-07 9.7E-12 87.6 11.5 133 579-713 1-138 (149)
29 PF03410 Peptidase_M44: Protei 98.1 5.4E-05 1.2E-09 80.9 14.0 170 101-297 20-196 (590)
30 PF08367 M16C_assoc: Peptidase 98.0 2.6E-05 5.7E-10 81.8 9.3 167 547-727 53-239 (248)
31 PHA03081 putative metalloprote 97.9 0.00015 3.3E-09 77.7 13.8 185 101-315 20-211 (595)
32 PF08367 M16C_assoc: Peptidase 94.6 0.28 6E-06 51.5 10.9 92 98-191 91-193 (248)
33 PF14812 PBP1_TM: Transmembran 65.5 2 4.4E-05 35.2 0.0 14 63-76 35-48 (81)
34 PF09026 CENP-B_dimeris: Centr 60.5 2.8 6.2E-05 35.1 0.0 8 119-126 46-53 (101)
35 PF09851 SHOCT: Short C-termin 50.0 26 0.00056 23.1 3.2 16 899-914 15-30 (31)
36 PF09186 DUF1949: Domain of un 38.4 92 0.002 23.4 5.4 50 133-182 4-53 (56)
37 PF14812 PBP1_TM: Transmembran 31.9 15 0.00033 30.2 0.0 15 66-80 34-48 (81)
38 KOG1832 HIV-1 Vpr-binding prot 29.2 26 0.00056 42.0 1.2 8 117-124 1466-1473(1516)
39 PRK11512 DNA-binding transcrip 27.9 1.9E+02 0.004 27.2 6.7 67 356-433 73-139 (144)
40 cd08317 Death_ank Death domain 25.4 4E+02 0.0088 22.3 9.1 74 880-964 7-83 (84)
41 PF05120 GvpG: Gas vesicle pro 22.8 2.4E+02 0.0053 23.4 5.3 39 878-918 28-66 (79)
42 PRK03573 transcriptional regul 22.7 2.6E+02 0.0056 26.2 6.6 66 356-433 65-130 (144)
No 1
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.5e-121 Score=1053.34 Aligned_cols=946 Identities=42% Similarity=0.703 Sum_probs=871.3
Q ss_pred CCCCCCccccCCccccCcCccccccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccc
Q 001730 1 MGGNGCVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDE 80 (1019)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1019)
|.|+..+.--+..+.|++.|.|.||+++|+|||+|++++||.. +
T Consensus 5 ~~~~~~~~~~~~~~~k~~~d~r~yr~~~L~Ngl~alLisDp~t--------------D---------------------- 48 (974)
T KOG0959|consen 5 MSGNIVLKREDVSIVKSLGDTREYRGIELTNGLRALLISDPKT--------------D---------------------- 48 (974)
T ss_pred cccchhhhhcccccccCCCCccceeEEEecCCceEEEecCCCC--------------C----------------------
Confidence 5566777777777999999999999999999999999999987 6
Q ss_pred cchhhhhcccccccccceeEEEEEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCce
Q 001730 81 NDTEKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHT 160 (1019)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t 160 (1019)
++++++.|++||+.||.+.+|||||+|||+|+||+|||.++.+.++|.++||+.||+|+.++|
T Consensus 49 -----------------~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~T~~e~T 111 (974)
T KOG0959|consen 49 -----------------KSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAYTDSEHT 111 (974)
T ss_pred -----------------ccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCccccccccccc
Confidence 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeChhhHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcch
Q 001730 161 CYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLI 240 (1019)
Q Consensus 161 ~~~~~~~~~~l~~~L~~l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~ 240 (1019)
+|+|.+..++|+.+|++|+++|.+|+|.+++++||+.+|.+|++++.+++.|+.+++.+.++.|+|||++|.+||.++|.
T Consensus 112 ~y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tGN~~tL~ 191 (974)
T KOG0959|consen 112 NYYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTGNKKTLL 191 (974)
T ss_pred eEEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhccccchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCccHHHHHHHHHHhccCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCCCCccccccccc---cceEEEEEe
Q 001730 241 GAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWK---ACKLFRLEA 317 (1019)
Q Consensus 241 ~~~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 317 (1019)
..-+.+ -+++.|++||++||++++|++||+|+.+++.++.++.+.|+.+++...+.|.+. .+|+. .++.+.+.+
T Consensus 192 ~~p~~~-~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f~--~~p~~~e~~~~~~~v~p 268 (974)
T KOG0959|consen 192 EGPREI-DLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVFP--EPPFLPEELKKLVRVVP 268 (974)
T ss_pred hccccc-hHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCccc--CCCCChHHhCcEEEEEe
Confidence 522212 569999999999999999999999999999999999999999999888887773 33333 567788889
Q ss_pred ccccceEEEEEecCCCchhhhcChHHHHHHHhcCCCCCcHHHHHHhcCccccccccccCCCCCCcccceEEEEEEEeChh
Q 001730 318 VKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDS 397 (1019)
Q Consensus 318 ~~~~~~v~i~~~~~~~~~~~~~~~~~~l~~lLg~~~~~~L~~~Lr~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~ 397 (1019)
.++...+.|.|++|+....|+..+.+++++++|++++|+|..+|+.+||+.++.++......+++ .|.|.+.+++.
T Consensus 269 ik~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~~gw~~sl~a~~~~~as~~~----~f~v~idLtd~ 344 (974)
T KOG0959|consen 269 IKDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLKRLGWATSLEAGIPEFASGYS----FFNVSIDLTDE 344 (974)
T ss_pred ccccceEEEEEecCCcccccccCcHHHHHHHhccCCcchHHHHHHHhhchheeecCCCccccccc----eEEEEEEeccc
Confidence 99999999999999999889999999999999999999999999999999999988876554554 99999999999
Q ss_pred hhhcHHHHHHHHHHHHHHHHHcCCchHHHHHHhhhcccceecccCCChHHHHHHHHHhccCCCccccccccccccCCCHH
Q 001730 398 GLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEE 477 (1019)
Q Consensus 398 g~~~~~~v~~~i~~~l~~l~~~~~~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~e 477 (1019)
|.+++++++..++++|+.++..|..++.+++...+-...|.++.+.++++.+..++.+++.+|+.+++.+...+..++++
T Consensus 345 G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq~~P~~~il~~~~ll~~~~p~ 424 (974)
T KOG0959|consen 345 GLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQYYPVEDVLTGSYLLTEFDPD 424 (974)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcccCChHHhhcchhhhhhcChH
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred HHHHHHhccCcCceEEEEEeCCCCCCCCccccceeccccccccCChhHHHhhcCCCCCCCCcCCCCCCCCCCCCceeccc
Q 001730 478 MIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRAN 557 (1019)
Q Consensus 478 ~i~~~~~~l~~~~~~i~i~~p~~~~~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~~~~~~~lP~~n~fip~~~~l~~~ 557 (1019)
.|+.++..|.|.|+++++++..+ .+.++..|+|||+.|.+++||+++++.|.+..+ +..+.||.+|.|||++|++...
T Consensus 425 ~i~~~~~~L~p~n~~v~~~s~~~-~~~~d~~E~~ygt~y~~e~i~~~~~~~~~~~~~-~~~l~lP~~nefI~t~f~~~~~ 502 (974)
T KOG0959|consen 425 LIQEVLSSLVPSNMRVILVSRSF-EGKTDKAEPWYGTAYKVEDIPAEIIKEWENSHL-NPELHLPTPNEFIPTDFSILPA 502 (974)
T ss_pred HHHHHHHhcCcccceeeeeeecc-ccccccccceeccccccccCCHHHHHHhhccCc-cccccCCCCCcccccccccccc
Confidence 99999999999999999999888 567899999999999999999999999966655 6889999999999999999876
Q ss_pred CCCCCCCCCCCCeEeeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhHhhhhcCc
Q 001730 558 DISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKL 637 (1019)
Q Consensus 558 ~~~~~~~~~~~P~~i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~e~~~~~~~~g~ 637 (1019)
+... ..+|.++++++..++||++|+.|+.|++.+.+.+.+|....++.+.+++.+|..++.+.+.++.|.|..||+
T Consensus 503 ~~~~----~~~P~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~~l~d~l~E~~Y~A~~aGl 578 (974)
T KOG0959|consen 503 PIPK----LEYPVLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYVRLLKDQLNEYLYPALLAGL 578 (974)
T ss_pred cCcc----ccCCeeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHHHHHHHHHhHHHHHHHhccc
Confidence 6532 358999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhccc-ChhhHHHHHHHHhhcCCCCC
Q 001730 638 ETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYD 716 (1019)
Q Consensus 638 ~~~~~~~~~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~-~p~~~a~~~~~~ll~~~~~~ 716 (1019)
.++++.+..|+.++++||+++++.++..+.+.|.+..+++++|+.+|+.+.+++++... +|+.+|.+.+..++.+..|+
T Consensus 579 ~~~~~~s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f~~~~~rf~iike~~~~~~~n~~~~~p~~~a~~~~~lll~~~~W~ 658 (974)
T KOG0959|consen 579 TYSLSSSSKGVELRVSGFNEKLPLLLEKVVQMMANFELDEDRFEIIKELLKRELRNHAFDNPYQLANDYLLLLLEESIWS 658 (974)
T ss_pred eEEeeecCCceEEEEeccCcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999554 59999999999999999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCC-----CCCccccccceeEECCCCC
Q 001730 717 VDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQ-----PLPIEMRHQECVICLPSGA 791 (1019)
Q Consensus 717 ~~~~~~~l~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 791 (1019)
....++.++.++++++..|...++++.+++++|+||++.++|.++++.+.+.++.. |....+....+.+.+|.|.
T Consensus 659 ~~e~~~al~~~~le~~~~F~~~~~~~~~~e~~i~GN~te~~A~~l~~~v~d~l~~~~~~~~p~~~~~~~~~~~~~lp~G~ 738 (974)
T KOG0959|consen 659 KEELLEALDDVTLEDLESFISEFLQPFHLELLIHGNLTEKEALQLLKSVLDILKSAAPNSRPLFRSEHLPRREIQLPNGD 738 (974)
T ss_pred hHHHHHHhhcccHHHHHHHHHHHhhhhheEEEEecCcchHHHHHHHHHHHhhhhccCCCCccccccccCcccceeccCCc
Confidence 99999999999999999999999999999999999999999999998888888322 2111234556677888888
Q ss_pred eEEEEecccCCCCccceeEEEEEEeccccCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEE
Q 001730 792 NLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCF 871 (1019)
Q Consensus 792 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~lss~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~ 871 (1019)
.+++... .+..+.|+++. .++|+ +..+..+.+.+.++.+++..++|+.||+|+||||.|+++.....|..++.+
T Consensus 739 ~~~~~~~-~n~~~~ns~i~-~~~Q~----~~~~~~~~~~~~L~~~li~ep~Fd~LRTkeqLGYiv~~~~r~~~G~~~~~i 812 (974)
T KOG0959|consen 739 YYFYRHL-LNKTDDNSCIE-VYYQI----GVQDTRDNAVLGLLEQLIKEPAFDQLRTKEQLGYIVSTGVRLNYGTVGLQI 812 (974)
T ss_pred eEEEEcc-cccCCCCceEE-EEEEc----ccchhHHHHHHHHHHHHhccchHHhhhhHHhhCeEeeeeeeeecCcceeEE
Confidence 8875443 67788999999 99998 788999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCChhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCchHHHHHH
Q 001730 872 CIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAED 951 (1019)
Q Consensus 872 ~v~s~~~~~~~~~~~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 951 (1019)
.||+. ++++.++.+|+.|++.+.+.+..|++++|+..+.+++......+.++.....++|.+|..+.|.|++.++.++.
T Consensus 813 ~Vqs~-~~~~~le~rIe~fl~~~~~~i~~m~~e~Fe~~~~~lI~~~~ek~~~l~~e~~~~w~ei~~~~y~f~r~~~~v~~ 891 (974)
T KOG0959|consen 813 TVQSE-KSVDYLEERIESFLETFLEEIVEMSDEEFEKHKSGLIASKLEKPKNLSEESSRYWDEIIIGQYNFDRDEKEVEA 891 (974)
T ss_pred EEccC-CCchHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHhhcCcchhHHHHHHHHHHHhhhhcchhhHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCCCcchhhc---c-c---cCcceecChHHHhhcCcccccCC
Q 001730 952 LKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEK---H-S---KSALVIKDLTAFKLSSEFYQSLC 1019 (1019)
Q Consensus 952 i~~vt~edv~~~~~~~l~p~~~~~~~~~v~v~G~~~~~~~~~~---~-~---~~~~~~~~~~~~~~~~~~~~~~~ 1019 (1019)
++.+|++|+..++..++..++..++++++.+.|+....+...- . . ....-|.|++.|++.+++||..+
T Consensus 892 l~~i~k~~~i~~f~~~~~~~a~~~~~lsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~d~~~fk~~~~l~~~~~ 966 (974)
T KOG0959|consen 892 LKKITKEDVINFFDEYIRKGAAKRKKLSVHVHGKQLDEEASSEKIKSQSENLLKIKEITDIVAFKRSLPLYPLVK 966 (974)
T ss_pred HHhhhHHHHHHHHHhhccccchhcceEEEEecCchhhhhhhcccchhhhhhcccccchHHHHHhhcccccccccc
Confidence 9999999999999999999999999999999998754331111 1 0 01122789999999999999863
No 2
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6e-119 Score=1015.53 Aligned_cols=921 Identities=31% Similarity=0.522 Sum_probs=841.9
Q ss_pred cCCccccCcCccccccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhcc
Q 001730 10 SDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKG 89 (1019)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (1019)
-...|.++..|.+.|+.++|+|||++++++||.. +
T Consensus 10 ~~~~i~~~~~d~r~y~~I~LpNGl~~LlisDP~a--------------~------------------------------- 44 (937)
T COG1025 10 IVLTIHKPALDDRKYRAIKLPNGLRALLVSDPQA--------------D------------------------------- 44 (937)
T ss_pred chhhcccCcccCcceeEEECCCCceEEEecCCCC--------------C-------------------------------
Confidence 3457899999999999999999999999999998 7
Q ss_pred cccccccceeEEEEEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChh
Q 001730 90 KGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKRE 169 (1019)
Q Consensus 90 ~~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~ 169 (1019)
++.++|.|++|+.+||.+.+|+|||+|||+|+||+|||.++.|..+|+++||+.||+|..++|+|+|++.++
T Consensus 45 --------ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhgGs~NA~T~~~~T~fyFeV~~~ 116 (937)
T COG1025 45 --------KSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGSHNASTAGERTAFYFEVEND 116 (937)
T ss_pred --------ccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcCCccccccCCCceeEEEEecHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcchhhhhcCccH
Q 001730 170 FLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINL 249 (1019)
Q Consensus 170 ~l~~~L~~l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~ 249 (1019)
+|+.+|++|+++|.+|+|+++.++||+.+|.+|+.++..++.+++++....++.++||++||++||.+||.. ..|..+
T Consensus 117 al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~srFs~GN~~TL~~--~p~~~v 194 (937)
T COG1025 117 ALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKFSTGNLETLSD--KPGLVV 194 (937)
T ss_pred HHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCccccCCCChhhhcc--CCCchH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999985 124478
Q ss_pred HHHHHHHHHhccCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCCCCccccccccc---cceEEEEEeccccceEEE
Q 001730 250 QEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWK---ACKLFRLEAVKDVHILDL 326 (1019)
Q Consensus 250 ~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~i 326 (1019)
.++|++||++||+|+||++||+|+.+++++.+++.++||.+|++....+.. +.|+.. .++++.+.+..+...+.|
T Consensus 195 ~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p~~--p~p~~~d~~t~~ii~i~p~~~~~~L~i 272 (937)
T COG1025 195 QQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPPI--PVPVVTDEQTGKIIHIVPAKPRPRLRI 272 (937)
T ss_pred HHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCCCC--CCCCCChHHhCceEEeccCCCCceEEE
Confidence 999999999999999999999999999999999999999999877665554 223332 678888888889999999
Q ss_pred EEecCCCchhhhcChHHHHHHHhcCCCCCcHHHHHHhcCccccccccccCCCCCCcccceEEEEEEEeChhhhhcHHHHH
Q 001730 327 TWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDII 406 (1019)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~lLg~~~~~~L~~~Lr~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~v~ 406 (1019)
.|++++....+...+..+++++||++++|+|...|.++||+.+++++......++ |.|.|+..+|++|+++.++|+
T Consensus 273 ~f~i~~~~~~~~~~~~~~~s~Lig~es~gsL~~~Lk~~Glit~l~a~~~~~~~n~----~~f~is~~LT~~Gl~~~~~VI 348 (937)
T COG1025 273 YFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWLKKQGLITELSAGLDPISGNY----GVFAISYELTDKGLAHYDRVI 348 (937)
T ss_pred EEEcCCcccccccCCHHHHHHHhccCCCchHHHHHHhccchhhhccccccccCCc----ceEEEEeehhhcchhhHHHHH
Confidence 9999998888888999999999999999999999999999999999877654444 599999999999999999999
Q ss_pred HHHHHHHHHHHHcCCchHHHHHHhhhcccceecccCCChHHHHHHHHHhccCCCccccccccccccCCCHHHHHHHHhcc
Q 001730 407 GFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFF 486 (1019)
Q Consensus 407 ~~i~~~l~~l~~~~~~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~e~i~~~~~~l 486 (1019)
..++++++.++.+|+..+.+++..+.....|.+...+.+++++..++.+|...+++.++.....+...++++++.++..+
T Consensus 349 ~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~m~~~p~~~~~~~~~~~~~yd~~~~~~~l~~~ 428 (937)
T COG1025 349 ALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADNMEREPVEHTLYASLVLPRYDPKAIQERLALM 428 (937)
T ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccccCChHHHHHHHHHhcccCChhhhhchhhcccccCHHHHHHHHHhh
Confidence 99999999999999999999999999999999999888999999999999888888888888899999999999999998
Q ss_pred CcCceEEEEEeCCCCCCCCccccceeccccccccCChhHHHhhcCCCCCCCCcCCCCCCCCCCCCceecccCCCCCCCCC
Q 001730 487 MPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTV 566 (1019)
Q Consensus 487 ~~~~~~i~i~~p~~~~~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~~~~~~~lP~~n~fip~~~~l~~~~~~~~~~~~ 566 (1019)
.|+|++++.+++. ...+..+.||+++|.+.++.++.++.|+.... ...+.||.+|+|||+++++.......
T Consensus 429 ~pen~R~~lis~~---~~~~~~a~~~~~py~v~~~~~~~~~~~~~~~~-~~~l~lP~~N~fIp~~~~~~~~~~~~----- 499 (937)
T COG1025 429 TPENARLWLISKL---EEHDKAAYFYGFPYQVDDYTAQPLDAWQQKAD-SIELSLPEPNPFIPDDVSLIKSEKKF----- 499 (937)
T ss_pred CccceEEEEecCC---CCccccceeecCcceecchhhhhhhhhhcccc-cccccCCCCCCCCCccccccccccCC-----
Confidence 8999999999996 34588899999999999999999999988765 56778999999999999985444333
Q ss_pred CCCeEeeccCCceEEEecCCCCCC-CeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhHhhhhcCcEEEEEEeC
Q 001730 567 TSPTCIIDEPLIRFWYKLDNTFKL-PRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFS 645 (1019)
Q Consensus 567 ~~P~~i~~~~g~~v~~~~~~~f~~-P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~e~~~~~~~~g~~~~~~~~~ 645 (1019)
+.|.++...+|.++||.+++.|.+ ||+.+++.|++|....++++.++..|++.+..+.+.+..|+|..+|+++++..+.
T Consensus 500 ~~p~ll~~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s~r~~Vl~~l~~~la~dal~~~~y~A~~aG~sfs~~~~~ 579 (937)
T COG1025 500 TFPQLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRSPRNQVLTELYAYLANDALDKLSYQASLAGLSFSLAANS 579 (937)
T ss_pred CCchhhhcCCCceEEEecCCccccCCcceeEEEEeCcccccCHHHHHHHHHHHHHHHHHHHhhhhHHHhcceEEEeecCC
Confidence 379999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccC-hhhHHHHHHHHhhcCCCCCHHHHHHHh
Q 001730 646 DKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMK-PLSHSSYLRLQVLCQSFYDVDEKLSIL 724 (1019)
Q Consensus 646 ~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~~-p~~~a~~~~~~ll~~~~~~~~~~~~~l 724 (1019)
+|+.++++||+++++.++..+++.+.+..+++++|..+|+++.+.+++...+ |+..+.+.+..++.++.|+..+.++.|
T Consensus 580 ~Gl~ltisGft~~lp~L~~~~l~~l~~~~~~~~~f~~~K~~~~~~~~~a~~~~p~~~~~~~l~~l~~~~~~s~~e~~~~l 659 (937)
T COG1025 580 NGLDLTISGFTQRLPQLLRAFLDGLFSLPVDEDRFEQAKSQLSEELKNALTGKPYRQALDGLTGLLQVPYWSREERRNAL 659 (937)
T ss_pred CceEEEeeccccchHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHhhhhhCCCCcCHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999887 999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEECCCCCeEEEEecccCCCC
Q 001730 725 HGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCE 804 (1019)
Q Consensus 725 ~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1019)
++++.+++.+|...++++.+++++|+||++.++|.++.+.....++..+.. ....+.+.++.+...++......+..
T Consensus 660 ~~v~~~e~~~f~~~l~~~~~lE~lv~Gn~~~~da~~l~~~~~~~l~~~~s~---~~~~~~~~~~~~~~~~~e~~~~~~~~ 736 (937)
T COG1025 660 ESVSVEEFAAFRDTLLNGVHLEMLVLGNLTEADATNLAETLQKKLPAIGST---WYRNPSVYLLKGGTRIFETVGGESDS 736 (937)
T ss_pred hhccHHHHHHHHHHhhhccceeeeeeccchHHHHHHHHHHHHhhhcccCCc---ccCCCceeccCCCeeEeeeccCCccc
Confidence 999999999999999999999999999999999999998777666654321 12233344455555554444555556
Q ss_pred ccceeEEEEEEeccccCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHHH
Q 001730 805 TNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQ 884 (1019)
Q Consensus 805 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~lss~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~v~s~~~~~~~~~ 884 (1019)
.+++++ +. . ...+++..++..|++++++..+|.+||+|+||||.|+|++....+..|+.|+|||+.+.|+++.
T Consensus 737 an~~i~--~~-~----~~~~~~~~a~s~Ll~~l~~~~ff~~LRTkeQLGY~Vfs~~~~v~~~~gi~f~vqS~~~~p~~L~ 809 (937)
T COG1025 737 ANAAIL--YP-Q----QYDEIKSSALSSLLGQLIHPWFFDQLRTKEQLGYAVFSGPREVGRTPGIGFLVQSNSKSPSYLL 809 (937)
T ss_pred ccceeE--ec-c----ccchHHHHHHHHHHHHHHhHHhHHHhhhhhhcceEEEecceeecCccceEEEEeCCCCChHHHH
Confidence 666655 32 2 3337889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHhcCCHHHHHHHH
Q 001730 885 ERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWY 964 (1019)
Q Consensus 885 ~~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~vt~edv~~~~ 964 (1019)
++|+.|++.+...+.+|++++|+..|.++++++...+.|+.+++.++|..+..+.++|+.+++.++.++.+|++++.+|+
T Consensus 810 ~r~~~F~~~~~~~l~~ms~e~Fe~~k~alin~il~~~~nl~e~a~r~~~~~~~g~~~Fd~~ek~i~~vk~LT~~~l~~f~ 889 (937)
T COG1025 810 ERINAFLETAEPELREMSEEDFEQIKKALINQILQPPQNLAEEASRLWKAFGRGNLDFDHREKKIEAVKTLTKQKLLDFF 889 (937)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHhccCCCCcCcHHHHHHHHHhcCHHHHHHHH
Confidence 99999999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCccEEEEEEecCCCCcchhhccccCcceecChHHHhhcCcc
Q 001730 965 KTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEF 1014 (1019)
Q Consensus 965 ~~~l~p~~~~~~~~~v~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1019)
..++... ++.+++++|.| +..-++.... .+|++|++..+++..++.
T Consensus 890 ~~~l~~~--~g~~l~~~i~g-~~~e~~~~~~-~~~~~~~~~~~~~~~~~~ 935 (937)
T COG1025 890 ENALSYE--QGSKLLSHIRG-QNGEAEYAHP-EGWTVLENVSALQQTAPL 935 (937)
T ss_pred HHhhccc--ccceeeeeeec-cccccccccC-Cceeeehhhhhhcccccc
Confidence 9999644 88999999999 5666677765 999999999999988764
No 3
>PRK15101 protease3; Provisional
Probab=100.00 E-value=1.4e-110 Score=1057.62 Aligned_cols=921 Identities=26% Similarity=0.422 Sum_probs=801.6
Q ss_pred CCccccCcCccccccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhccc
Q 001730 11 DEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGK 90 (1019)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (1019)
...++||++|.+.|+.++|+|||+|++++++.. +
T Consensus 31 ~~~~~k~~~d~~~~~~~~L~NGL~v~l~~~~~~--------------~-------------------------------- 64 (961)
T PRK15101 31 QETIRKSEKDPRQYQAIRLDNGMTVLLVSDPQA--------------V-------------------------------- 64 (961)
T ss_pred cccCcCCCCCccceEEEEeCCCCEEEEEeCCCC--------------c--------------------------------
Confidence 346899999999999999999999999999988 7
Q ss_pred ccccccceeEEEEEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhh
Q 001730 91 GIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREF 170 (1019)
Q Consensus 91 ~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~ 170 (1019)
.+++++++++|+++||.+.+|+|||+|||+|+||++||..++|.++++.+||++||+|+.++|+|++++++++
T Consensus 65 -------~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~Gg~~NA~T~~d~T~y~~~~~~~~ 137 (961)
T PRK15101 65 -------KSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKHGGSHNASTASYRTAFYLEVENDA 137 (961)
T ss_pred -------ceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHhCCCccceECCCceEEEEEcCHHH
Confidence 9999999999999999999999999999999999999976799999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcchhhhhcCccHH
Q 001730 171 LKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQ 250 (1019)
Q Consensus 171 l~~~L~~l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~ 250 (1019)
|+.+|++|++++.+|.|+++++++||++|.+|++...++|.+++.+.+..++|++|||+++..|+.++|.... ...++
T Consensus 138 l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp~~~~~~G~~etl~~~~--~~~~~ 215 (961)
T PRK15101 138 LPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRDGMRMAQVSAETINPAHPGSRFSGGNLETLSDKP--GSKLQ 215 (961)
T ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhCCCCCCcccCCCCCHHHhhcCC--chHHH
Confidence 9999999999999999999999999999999999988999999999999999999999999999999999710 00289
Q ss_pred HHHHHHHHhccCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCCCCcccccccc---ccceEEEEEeccccceEEEE
Q 001730 251 EQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIW---KACKLFRLEAVKDVHILDLT 327 (1019)
Q Consensus 251 ~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~i~ 327 (1019)
++|++||++||+|+||+|+|+|++++++++++++++|+.||++..+.+... .++. ..+..+...+..++.++.+.
T Consensus 216 ~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~l~ 293 (961)
T PRK15101 216 DALVDFYQRYYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASVPEIT--VPVVTDAQKGIIIHYVPAQPRKVLRVE 293 (961)
T ss_pred HHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCCCCCC--CCCCCHHHcCeEEEEEECCCCcEEEEE
Confidence 999999999999999999999999999999999999999987654322221 1121 13344555566778899999
Q ss_pred EecCCCchhhhcChHHHHHHHhcCCCCCcHHHHHHhcCccccccccccCCCCCCcccceEEEEEEEeChhhhhcHHHHHH
Q 001730 328 WTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIG 407 (1019)
Q Consensus 328 ~~~~~~~~~~~~~~~~~l~~lLg~~~~~~L~~~Lr~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~v~~ 407 (1019)
|+.|.....+...+..+++.+||+++.++|+..|+++||+|+++++..... ..+.|.|.|++.+++.|.++++++++
T Consensus 294 ~~~p~~~~~~~~~~~~~l~~ll~~~~~g~l~~~L~~~gla~~v~s~~~~~~---~~~~g~f~i~~~~~~~~~~~~~~v~~ 370 (961)
T PRK15101 294 FRIDNNSAKFRSKTDEYISYLIGNRSPGTLSDWLQKQGLAEGISAGADPMV---DRNSGVFAISVSLTDKGLAQRDQVVA 370 (961)
T ss_pred EecCCcHHHHhhCHHHHHHHHhcCCCCCcHHHHHHHcCccceeeecccccc---CCCceEEEEEEEcChHHHHhHHHHHH
Confidence 999986655556678999999999999999999999999999988765321 11245999999999988779999999
Q ss_pred HHHHHHHHHHHcCCchHHHHHHhhhcccceecccCCChHHHHHHHHHhccCCCccccccccccccCCCHHHHHHHHhccC
Q 001730 408 FVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFM 487 (1019)
Q Consensus 408 ~i~~~l~~l~~~~~~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~e~i~~~~~~l~ 487 (1019)
.|+++|+.+++.|+++++++++|+....+|.+.....+.+.+..++..+..+++++++.....++.+++++|+++++.|.
T Consensus 371 ~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~l~ 450 (961)
T PRK15101 371 AIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTMLRVPVEHTLDAPYIADRYDPKAIKARLAEMT 450 (961)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHhhhCCHHHheeCchhhhcCCHHHHHHHHhhcC
Confidence 99999999999999999999999999999988776677788899999888888888999888999999999999999999
Q ss_pred cCceEEEEEeCCCCCCCCccccceeccccccccCChhHHHhhcCCCCCCCCcCCCCCCCCCCCCceecccCCCCCCCCCC
Q 001730 488 PENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVT 567 (1019)
Q Consensus 488 ~~~~~i~i~~p~~~~~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~~~~~~~lP~~n~fip~~~~l~~~~~~~~~~~~~ 567 (1019)
++|+++++++|++ .++..++||+++|++.+|+.++++.|....+ ...+.||.+|+|||++|++....... .
T Consensus 451 ~~n~~i~~~~~~~---~~~~~~~~~~~~Y~~~~i~~~~~~~~~~~~~-~~~l~lP~~n~fip~~~~~~~~~~~~-----~ 521 (961)
T PRK15101 451 PQNARIWYISPQE---PHNKTAYFVDAPYQVDKISEQTFADWQQKAQ-NIALSLPELNPYIPDDFSLIKADKAY-----K 521 (961)
T ss_pred HhHEEEEEEeCCC---CCCccccccCCcceeecCCHHHHHHHhcCCC-CccCCCCCCCCccCCCCeeccCCCCC-----C
Confidence 9999999999975 5678899999999999999999999987654 56799999999999999987654332 3
Q ss_pred CCeEeeccCCceEEEecCCCC-CCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhHhhhhcCcEEEEEEeCc
Q 001730 568 SPTCIIDEPLIRFWYKLDNTF-KLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSD 646 (1019)
Q Consensus 568 ~P~~i~~~~g~~v~~~~~~~f-~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~e~~~~~~~~g~~~~~~~~~~ 646 (1019)
.|.++.+++|++|||++|+.| .+|++.+++.|.+|....++.+.+++.|++.++...++++.|.+..+|++++++ +.+
T Consensus 522 ~p~~i~~~~g~~vw~~~d~~f~~~Pk~~i~~~~~~~~~~~~~~~~~l~~L~~~ll~~~l~e~~y~a~~aG~~~~~~-~~~ 600 (961)
T PRK15101 522 HPELIVDEPGLRVVYMPSQYFADEPKADISLVLRNPKAMDSARNQVLFALNDYLAGLALDQLSNQASVGGISFSTN-ANN 600 (961)
T ss_pred CCeEEEcCCCeEEEEeCCCccccCCCEEEEEEEeCCCccCCHHHHHHHHHHHHHHHHHHHHHhchHHhcCcEEEEc-cCC
Confidence 799999999999999999999 599999999999999999999999999999999999999999999999999999 789
Q ss_pred eeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccC-hhhHHHHHHHHhhcCCCCCHHHHHHHhc
Q 001730 647 KLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMK-PLSHSSYLRLQVLCQSFYDVDEKLSILH 725 (1019)
Q Consensus 647 ~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~~-p~~~a~~~~~~ll~~~~~~~~~~~~~l~ 725 (1019)
|+.++++|++++++.+++++.+.|.+|.|++++|+++|+++++++++..++ |+..+...+..+...+.+...++.+.|+
T Consensus 601 g~~i~v~g~s~~l~~ll~~l~d~l~~~~~~~~~fe~~k~~~~~~l~~~~~~~~~~~~~~~~~~~~~~py~~~~~~~~~l~ 680 (961)
T PRK15101 601 GLMVNANGYTQRLPQLLQALLEGYFSFTPTEEQLAQAKSWYREQLDSAEKGKAYEQAIMPAQMLSQVPYFERDERRKLLP 680 (961)
T ss_pred CEEEEEEecChhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhcccCcHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999988776 8777766554444444555788999999
Q ss_pred cCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEECCCCCeEEEEecccCCCCc
Q 001730 726 GLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCET 805 (1019)
Q Consensus 726 ~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1019)
++|++|+++|++++|.+.+++++|+||++.+++.++++++++.++..+.. ....+.+.++++....+. .......
T Consensus 681 ~it~edl~~f~~~~~~~~~~~~~v~GNi~~~ea~~l~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~ 755 (961)
T PRK15101 681 SITLKDVLAYRDALLSGATPEFLVVGNLTEEQVTTLARDVQKQLGADGTE---WWRGKDVVVDKKQSVNFE--KAGSSTD 755 (961)
T ss_pred cCCHHHHHHHHHHHHHhceEEEEEEcCCCHHHHHHHHHHHHHHhccCCcc---cccccceEeCCCCeEEEe--cCCCCCC
Confidence 99999999999999999999999999999999999999998888654321 111111223333222211 1112223
Q ss_pred cceeEEEEEEeccccCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHHHH
Q 001730 806 NSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQE 885 (1019)
Q Consensus 806 ~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~lss~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~v~s~~~~~~~~~~ 885 (1019)
++++. .+++. +..+....+++.||+++++||||++|||++||||+|+|+.....+.+++.+.+||+..+++.+..
T Consensus 756 ~~~~~-~~~~~----g~~~~~~~v~~~lLg~~~ssrlf~~LRtk~qLgY~V~s~~~~~~~~~~~~~~vqs~~~~~~~l~~ 830 (961)
T PRK15101 756 SALAA-VYVPT----GYDEYQSSAYSSLLGQIIQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPAYLWQ 830 (961)
T ss_pred CeEEE-EEEeC----CCCCHHHHHHHHHHHHHHhHHHHHHHHHHhhhceEEEEEeeccCCeeeEEEEEECCCCCHHHHHH
Confidence 45555 56666 55678999999999999999999999999999999999999999999999999999889999999
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHhcCCHHHHHHHHH
Q 001730 886 RIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYK 965 (1019)
Q Consensus 886 ~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~vt~edv~~~~~ 965 (1019)
+|++|++.+...+.+||++||+++|+++++++...++++.+++.++|.++..++++|++.+++++.|++||++||+++++
T Consensus 831 ~i~~f~~~~~~~l~~lt~eE~~~~k~~l~~~~~~~~~sl~~~a~~~~~~i~~~~~~fd~~~~~~~~i~~vT~edv~~~~~ 910 (961)
T PRK15101 831 RYQAFFPQAEAKLRAMKPEEFAQYQQALINQLLQAPQTLGEEASRLSKDFDRGNMRFDSRDKIIAQIKLLTPQKLADFFH 910 (961)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCcChHHHHHHHHHcCCHHHHHHHHH
Confidence 99999998766667899999999999999999999999999999999999888889999999999999999999999999
Q ss_pred Hh-cccCCCCccEEEEEEecCCCCcchhhccccCcceecChHHHhhcCccc
Q 001730 966 TY-LQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFY 1015 (1019)
Q Consensus 966 ~~-l~p~~~~~~~~~v~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1019)
+| +.++ +..++++|.|....-..... +.++..++|+..||+++++.
T Consensus 911 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 957 (961)
T PRK15101 911 QAVIEPQ---GLAILSQISGSQNGKADYAH-PKGWKTWENVSALQQTLPVM 957 (961)
T ss_pred HHhcCCC---CCEEEEEeeccCcccccccc-ccCCeeeCCHHHHhhcCccc
Confidence 98 6543 45889999988653221111 24577899999999998874
No 4
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=3e-60 Score=586.89 Aligned_cols=840 Identities=13% Similarity=0.063 Sum_probs=566.3
Q ss_pred eeEEEEEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcC--CcceeeeCCCceEEEEEeChh-hHHHH
Q 001730 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHG--GSSNAYTETEHTCYHFEIKRE-FLKGA 174 (1019)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g--~~~na~t~~~~t~~~~~~~~~-~l~~~ 174 (1019)
...++++|++|+ .+..|+||++|||+|+||++||.. ++...+.+.| +.+||+|+.|+|+|++++.++ +|..+
T Consensus 115 ~~~f~i~f~T~~----~d~~G~aH~LEH~~f~GS~k~p~~-~~~~~l~~~gl~~~lNA~T~~D~T~Y~~~~~~e~d~~~~ 189 (1119)
T PTZ00432 115 EMCFDFYVPTPP----HNDKGIPHILEHSVLSGSKKYNYK-DSFSLLVQGGFNSFLNAYTFKDRTSYLFASTNEKDFYNT 189 (1119)
T ss_pred eeEEEEEecCCC----CCCcchhHHHHHHHhCCCCCCCcc-cHHHHHHhcCcCCCccccCCCCceEEEeccCCHHHHHHH
Confidence 678999999996 456899999999999999999995 5666676644 889999999999999998764 79999
Q ss_pred HHHHHhhccCCCCChhHH--H---------HH--------------------HHHHHHHHHhhcCCHHHHHHHHHHhcCC
Q 001730 175 LMRFSQFFISPLMKVEAM--E---------RE--------------------VLAVDSEFNQALQNDACRLQQLQCHTSQ 223 (1019)
Q Consensus 175 L~~l~~~~~~P~~~~~~~--~---------~e--------------------~~~v~~E~~~~~~~~~~~~~~~~~~~~~ 223 (1019)
|+++++++++|.|+++++ . ++ +++|.+|+++..++|.+++++.+.+.+|
T Consensus 190 ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~~Emk~~~~~p~~~~~~~~~~~lf 269 (1119)
T PTZ00432 190 ADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVYSEMKKRFSDPLSFGYSVIYQNLF 269 (1119)
T ss_pred HHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 999999999999998863 2 21 7899999999999999999999999999
Q ss_pred CCCCCCcCCcCchhcchhhhhcCccHHHHHHHHHHhccCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCC----CC
Q 001730 224 LGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIK----PQ 299 (1019)
Q Consensus 224 ~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~----~~ 299 (1019)
+|||+++++|++++|.. +|+++|++||++||+|+||+|+++|++|++++.++++++|+.+|+..... +.
T Consensus 270 -~~pY~~~~~G~~~~I~~------lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~~~f~~~~~~~~~~~~~~~~ 342 (1119)
T PTZ00432 270 -SNVYKYDSGGDPKDIVE------LTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVDNYLTKHPKTGQLSHTAYRE 342 (1119)
T ss_pred -CCCCCCCCCCChHhhcc------CCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHHHHHhhcccccccccccccc
Confidence 99999999999999999 99999999999999999999999999999999999999998887652211 00
Q ss_pred -ccccc---cccccceEEEE---EeccccceEEEE-EecCCC-----------chhhhcChHHHHHHHhcCCCCCcHHHH
Q 001730 300 -FTVEG---TIWKACKLFRL---EAVKDVHILDLT-WTLPCL-----------HQEYLKKSEDYLAHLLGHEGRGSLHSF 360 (1019)
Q Consensus 300 -~~~~~---~~~~~~~~~~~---~~~~~~~~v~i~-~~~~~~-----------~~~~~~~~~~~l~~lLg~~~~~~L~~~ 360 (1019)
...+. +.+...+.+.. .....+..+.++ |.++.. .+..+..++.+|+++||+++.++|++.
T Consensus 343 ~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~VLs~lLggg~sS~L~q~ 422 (1119)
T PTZ00432 343 DADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYLALLVLNYLLLGTPESVLYKA 422 (1119)
T ss_pred cccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCccccccccccccCCHHHHHHHHHHHHHHcCCCccHHHHH
Confidence 00000 11222222221 112234556665 988422 223467899999999999999999999
Q ss_pred HHhcCccccccccccCCCCCCcccceEEEEEEEeCh-hh----hhcHHHHHHHHHHHHHHHHHcCCchHHHHHHhhhccc
Q 001730 361 LKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTD-SG----LEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNM 435 (1019)
Q Consensus 361 Lr~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~g----~~~~~~v~~~i~~~l~~l~~~~~~~~~l~~~k~~~~~ 435 (1019)
||++||+|++..+....... .+.|.|.+...+ .. .++++++.+.|+++|++++++|+++++++++++.+..
T Consensus 423 LrE~GLa~svv~~~~~~~~~----~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~l~~eGi~~eele~a~~qlef 498 (1119)
T PTZ00432 423 LIDSGLGKKVVGSGLDDYFK----QSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALTKVVTEGFNKSAVEASLNNIEF 498 (1119)
T ss_pred HHhcCCCcCCCcCcccCCCC----ceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999864322222222 348888875322 11 1347899999999999999999999999999988766
Q ss_pred ceecccCC---ChHHHHHHHHHhccC-CCccccccccccccC------CCHHHHHHHHhc-cCcCce-EEEEEeCCC--C
Q 001730 436 EFRFAEEQ---PQDDYAAELAGNLLI-YPAEHVIYGEYMYEV------WDEEMIKHLLGF-FMPENM-RIDVVSKSF--A 501 (1019)
Q Consensus 436 ~~~~~~~~---~~~~~~~~l~~~~~~-~~~~~~l~~~~~i~~------~t~e~i~~~~~~-l~~~~~-~i~i~~p~~--~ 501 (1019)
+++-.... ....++..++..+++ .+|.+.+.....++. .++..+++++++ |..++. .++++.|+. .
T Consensus 499 ~~rE~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~~~~~~y~e~Li~k~ll~N~h~~~v~~~p~~s~~ 578 (1119)
T PTZ00432 499 VMKELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRIDNESKYLEKLIEKHLLNNNHRVTVHLEAVESSK 578 (1119)
T ss_pred HhhhccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHHhcccHHHHHHHHHHccCCCeeeEEEEecCCccc
Confidence 65422110 135667777766654 567666555443332 244679999998 544433 445566653 1
Q ss_pred -CCCCccccceeccccccccCCh----------hHHHhhcCCCCCCCCcCCCCCCCCCCCCceecccCCCCCCCCCCCCe
Q 001730 502 -KSQDFHYEPWFGSRYTEEDISP----------SLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPT 570 (1019)
Q Consensus 502 -~~~~~~~e~~~~~~y~~~~i~~----------~~l~~~~~~~~~~~~~~lP~~n~fip~~~~l~~~~~~~~~~~~~~P~ 570 (1019)
..+....++. ..+-....+++ +.+++||+.++.+..+ ..+|. +++.++..+.. .+|.
T Consensus 579 ~~~~~~~~e~~-~L~~~~~~Ls~ee~~~i~~~~~~l~~~q~~~~~~e~l------~~lP~-l~~~DI~~~~~----~~~~ 646 (1119)
T PTZ00432 579 YEKEFNKLVKD-ELKERLSHLTKEQVDEMEKAYEKFKKEREADDDPEHL------DSFPI-LSLSDLNKETE----EIPT 646 (1119)
T ss_pred HHHHHHHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCChhHH------hhcCC-CcHHHcCCccc----CCcc
Confidence 0000011100 11111223332 2234455543211111 12232 33333322211 1232
Q ss_pred Ee---------------eccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHH--------
Q 001730 571 CI---------------IDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE-------- 627 (1019)
Q Consensus 571 ~i---------------~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~e-------- 627 (1019)
.. ...+++.+++.+.++ ++.+++.+.++....+.+...++.||+.+|....++
T Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T----nGi~y~~~~fdl~~l~~e~~~yl~L~~~~l~~~gT~~~s~~el~ 722 (1119)
T PTZ00432 647 KLYKLSSDSLKENMDLDSDGGSVTVLVHPIES----RGILYLDFAFSLDSLTVDELKYLNLFKALLKENGTDKLSSEEFT 722 (1119)
T ss_pred hhhhcccccccccccccccCCCcceEEEecCC----CCeEEEEEEecCCCCCHHHHhhHHHHHHHHHhcCCCCCCHHHHH
Confidence 21 234678887776444 578999998888888888999999999999875422
Q ss_pred HhHhhhhcCcEEEEEEeC--------------ceeEEEEeecCCCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHHHH
Q 001730 628 IIYQASVAKLETSVSIFS--------------DKLELKVYGFNDKLPVLLSKILAIAKSFLPSD-DRFKVIKEDVVRTLK 692 (1019)
Q Consensus 628 ~~~~~~~~g~~~~~~~~~--------------~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~-~~f~~~k~~~~~~l~ 692 (1019)
......++|+++++.... ..+.++++++.++++++++++.++|.++.|+. +++..+.++.+..+.
T Consensus 723 ~~i~~~tGg~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~f~d~~rl~~il~~~~~~~~ 802 (1119)
T PTZ00432 723 YKREKNLGGLSASTAFYSETNNLTYDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDADFSNSKKGVEILKRKINGMK 802 (1119)
T ss_pred HHHHHhCCCeEEEEEEeccccccccCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHH
Confidence 123446688887766533 25999999999999999999999999999985 558888888888888
Q ss_pred hcccC-hhhHHHHHHHHhhcCC-----CCC---HHHHHHHhc-c-C--C----HHHHHHHHHHHHhhhceEEEEecCCCH
Q 001730 693 NTNMK-PLSHSSYLRLQVLCQS-----FYD---VDEKLSILH-G-L--S----LADLMAFIPELRSQLYIEGLCHGNLSQ 755 (1019)
Q Consensus 693 ~~~~~-p~~~a~~~~~~ll~~~-----~~~---~~~~~~~l~-~-i--t----~~dl~~~~~~~~~~~~~~~~i~Gni~~ 755 (1019)
+...+ ++.+|..++..-+... .+. ....+..+. . . . .+.|...++++|++.++.+.|+|+.+.
T Consensus 803 ~~~~~~Gh~~A~~~~~s~~S~~~~~~e~~~G~~~~~fl~~l~~~~~e~~~~~v~~~L~~i~~~i~~~~~l~~~vt~~~~~ 882 (1119)
T PTZ00432 803 TVFSSKGHKFALKRMKSKFSVSDYADELVNGYSQLLFLKETLVPLAEKDWSKVESKLNEIRNKLLSMKNLTVNVTGDSEL 882 (1119)
T ss_pred HhhhhhHHHHHHHHHHhcCCHHHHHHHHhcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCcCCcEEEEEeCHHH
Confidence 88874 8888876665444321 111 122222221 1 1 1 345777888889999999999999754
Q ss_pred -HHHHHHHHHHHhhhcCC----CCCccccccc-eeEE---CC-CCCeEEEEecccCCCCccceeEEEEEEeccccCcccH
Q 001730 756 -EEAIHISNIFKSIFSVQ----PLPIEMRHQE-CVIC---LP-SGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELT 825 (1019)
Q Consensus 756 -~~a~~l~~~~~~~~~~~----~~~~~~~~~~-~~~~---~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 825 (1019)
+.+.+.+..+...++.. ..+....+.. ..+. .+ ...... ...+..++.+.. . |+ .-...+
T Consensus 883 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~----~~~p~~V~yv~~--~---~~-~~~~~~ 952 (1119)
T PTZ00432 883 LDSLLDDSTTFLKKLSSTFKENDNKSSDKVWVKEVLDKKLMESVDKNEF----IVLPTRVNFVGM--G---GK-LFDKSD 952 (1119)
T ss_pred HHHHHHHHHHHHHhcccccccccccccccccccccccccccCCcccceE----EEccCceeEEEE--e---cc-cccCCC
Confidence 34445555566655321 1000000000 0000 01 011111 112333333322 1 11 012234
Q ss_pred HHHHHHHHHHHHhc-hhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHHHHHHHHHHHHHHHHHh---CC
Q 001730 826 RLKALIDLFDEILE-EPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLE---GL 901 (1019)
Q Consensus 826 ~~~~~~~ll~~~ls-s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~v~s~~~~~~~~~~~i~~~l~~~~~~~~---~i 901 (1019)
+...++.++..+|+ +.||++||++ |+||++++.+.. .|...| .|. ++|. +.+.++.|-+-.....+ .+
T Consensus 953 ~~~~~l~Vl~~~L~~~yLw~~IR~~-GGAYG~~~~~~~-~G~~~f----~SY-RDPn-~~~Tl~~f~~~~~~l~~~~~~~ 1024 (1119)
T PTZ00432 953 KVDGSFQVIVHYLKNSYLWKTVRMS-LGAYGVFADLLY-TGHVIF----MSY-ADPN-FEKTLEVYKEVASALREAAETL 1024 (1119)
T ss_pred ccCHHHHHHHHHHccccchHHHccc-CCccccCCccCC-CCeEEE----EEe-cCCC-HHHHHHHHHHHHHHHHhcCCCC
Confidence 45677778888875 6899999997 679999877754 344333 233 4554 55677776665554433 49
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHhcCCHHHHHHHHHHhcccCCCCccEEEEE
Q 001730 902 DDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVR 981 (1019)
Q Consensus 902 se~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~vt~edv~~~~~~~l~p~~~~~~~~~v~ 981 (1019)
+++++++++-+.++.+.. +.++...+...+...+.+. ..+.++++++.|.++|++||+++|++|... ...-.++
T Consensus 1025 ~~~~l~~~iig~~~~~D~-p~~p~~~g~~~~~~~l~g~-t~e~rq~~R~~il~~t~edi~~~a~~~~~~----~~~~~~~ 1098 (1119)
T PTZ00432 1025 TDKDLLRYKIGKISNIDK-PLHVDELSKLALLRIIRNE-SDEDRQKFRKDILETTKEDFYRLADLMEKS----KEWEKVI 1098 (1119)
T ss_pred CHHHHHHHHHHHHhccCC-CCChHHHHHHHHHHHHcCC-CHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----hccCeEE
Confidence 999999999999999986 6778888777766666553 678899999999999999999999999853 2356788
Q ss_pred EecCCCCcchhh
Q 001730 982 VWGCNTNIKESE 993 (1019)
Q Consensus 982 v~G~~~~~~~~~ 993 (1019)
|+|.+..+.+..
T Consensus 1099 v~g~~~~~~~~~ 1110 (1119)
T PTZ00432 1099 AVVNSKTSDTAP 1110 (1119)
T ss_pred EEECHHHhhhcc
Confidence 888877766543
No 5
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=1.1e-56 Score=519.49 Aligned_cols=678 Identities=21% Similarity=0.233 Sum_probs=459.5
Q ss_pred cEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhcccccccccceeEEEEE
Q 001730 25 RVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAAMC 104 (1019)
Q Consensus 25 ~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 104 (1019)
+.++|+|||+|++++++.. + .+++.++
T Consensus 1 r~~tL~NGLrVllv~~p~~--------------p---------------------------------------~vav~l~ 27 (696)
T TIGR02110 1 RRITLPNGLRVHLYHQPDA--------------K---------------------------------------RAAALLR 27 (696)
T ss_pred CeEEcCCCCEEEEEECCCC--------------C---------------------------------------EEEEEEE
Confidence 3579999999999999988 7 9999999
Q ss_pred eCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHHHHhhccC
Q 001730 105 VGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFIS 184 (1019)
Q Consensus 105 ~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~l~~~~~~ 184 (1019)
|++||.+||.+.+|+|||+|||+|+||++++..++|.+.++.+||++||+|+.|+|+|++++++++++.+|+++++++.+
T Consensus 28 v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~d~T~y~~~v~~~~l~~aL~lLaD~l~~ 107 (696)
T TIGR02110 28 VAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLERTTAFFFELPAAALAAGLARLCDMLAR 107 (696)
T ss_pred EeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcCCeEEEEEEecHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999998557999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcchhhhhcCccHHHHHHHHHHhccCCC
Q 001730 185 PLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGG 264 (1019)
Q Consensus 185 P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~p~ 264 (1019)
|.|+++++++||+++.+|++...++|..+..+.+.+.+|++|||+++..|+.++|.... .++.++|++||++||+|+
T Consensus 108 P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~esL~~it---~~t~edL~~F~~~~Y~p~ 184 (696)
T TIGR02110 108 PLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRDSLALPN---TAFQQALRDFHRRHYQAG 184 (696)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHHHHhCcc---cchHHHHHHHHHHhcchh
Confidence 99999999999999999999999999999999999999999999999999999998610 045999999999999999
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHcccccCCCCCCCCccccccccccceEEEEEeccccceEEEEEecCCCchhhhcChHHH
Q 001730 265 LMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDY 344 (1019)
Q Consensus 265 n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~ 344 (1019)
||+|+|+||+++++++++++++|+.|+++..+.+.. +.+....++...... ...++.+.|..|..... +..++.+
T Consensus 185 NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~~~--~~p~~~~~~~~~~~~--~~~q~~l~~~~p~~~~~-d~~al~l 259 (696)
T TIGR02110 185 NMQLWLQGPQSLDELEQLAARFGASLAAGGECAQAP--PAPLLRFDRLTLAGG--SEPRLWLLFALAGLPAT-ARDNVTL 259 (696)
T ss_pred cEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCCCC--CCCCCCCceeEEEec--CcceEEEEEeecCCCCC-ChHHHHH
Confidence 999999999999999999999999998765432221 112222232222222 33567777777654322 2235899
Q ss_pred HHHHhcCCCCCcHHHHHHhcCccccccccccCCCCCCcccceEEEEEEEeChhhhhcHHHHHHHHHHHHHHHHHc--CCc
Q 001730 345 LAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQV--SPQ 422 (1019)
Q Consensus 345 l~~lLg~~~~~~L~~~Lr~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~v~~~i~~~l~~l~~~--~~~ 422 (1019)
++++||++++|+|+.+||++||+|+++++......+ .+.|.|++.+++.+.++.+++++.|+++|++++++ +++
T Consensus 260 L~~iLg~g~sSrL~~~LRe~GLaysV~s~~~~~~~g----~~lf~I~~~lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~ 335 (696)
T TIGR02110 260 LCEFLQDEAPGGLLAQLRERGLAESVAATWLYQDAG----QALLALEFSARCISAAAAQQIEQLLTQWLGALAEQTWAEQ 335 (696)
T ss_pred HHHHhCCCcchHHHHHHHHCCCEEEEEEeccccCCC----CcEEEEEEEEcCCCccCHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999999999865432222 34999999987655578999999999999999988 889
Q ss_pred hHHHHHHhhhcccceecccCCChHHHHHHHHHhccCCCccccccccccccCCCHHHHHHHHhccCcCceEEEEEeCCCCC
Q 001730 423 KWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAK 502 (1019)
Q Consensus 423 ~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~e~i~~~~~~l~~~~~~i~i~~p~~~~ 502 (1019)
.+|++++|+. +|.+... ++.+.+..-+ ..+++... ..-...++...+..+. ++ .
T Consensus 336 ~eel~rlk~~---~~~~~~~-~~l~~~r~~~---~~~~~~~~-------~~~~~~~~~~~l~~~~-~~-~---------- 389 (696)
T TIGR02110 336 LEHYAQLAQR---RFQTLAL-SPLAQLRGRA---LGFALGCA-------LPDALTDFLAALQDCP-RT-R---------- 389 (696)
T ss_pred HHHHHHHHHh---hhhhccc-ChHHHHhhhc---cCCCCccc-------CcchHHHHHHHHhhcc-cc-c----------
Confidence 9999999875 3332222 3333333111 11111100 0001122222222221 00 0
Q ss_pred CCCccccceeccccccccCChhHHHhhcCCCCCCCCcCCCCCCCCCCCCceeccc-------CCCCCC--C---CCCCCe
Q 001730 503 SQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRAN-------DISNDL--V---TVTSPT 570 (1019)
Q Consensus 503 ~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~~~~~~~lP~~n~fip~~~~l~~~-------~~~~~~--~---~~~~P~ 570 (1019)
..+.+|+.|||...-+..... ...... . ....|.
T Consensus 390 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (696)
T TIGR02110 390 ----------------------------------LLTQQQPGAPFAHSGLHAPVARLARAVVQARSVSLTLAASRCSAPK 435 (696)
T ss_pred ----------------------------------ccccCCCCcchhhhhccccccccccccccccccccccccccccccc
Confidence 012223333332100000000 000000 0 000000
Q ss_pred EeeccCCce-EEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhHhhhhcCcEEEEEEeCceeE
Q 001730 571 CIIDEPLIR-FWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLE 649 (1019)
Q Consensus 571 ~i~~~~g~~-v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~e~~~~~~~~g~~~~~~~~~~~~~ 649 (1019)
...-.. .+..++.. ..+.+++++..|...... +...+...+....-++..+|.+.+++...+.+.
T Consensus 436 ---~~~~~~~~~~~~~~~---~~~~l~l~w~~~~~~~~~--------~~~~l~~~l~~l~~~~~~~g~~~~~~~~~~~w~ 501 (696)
T TIGR02110 436 ---SPTRCAFLAALPSDK---TERALALRWGFPSHPPEE--------LALALQRQLRPLLADARHAGVNGSWQATGASWQ 501 (696)
T ss_pred ---ccccchhhhccCCCC---cccceeeeccCCCCcchH--------HHHHHHHHHHHHHHHHHhcCceeEEEEcCCeEE
Confidence 000000 01122211 245677777776632221 445566677777777888999999999999999
Q ss_pred EEEeecCCCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCCCCCHHHHHHHhccC
Q 001730 650 LKVYGFNDKLPVLLSKILAIAKSFLPS--DDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGL 727 (1019)
Q Consensus 650 l~~~g~s~~l~~~l~~l~~~l~~~~~~--~~~f~~~k~~~~~~l~~~~~~p~~~a~~~~~~ll~~~~~~~~~~~~~l~~i 727 (1019)
+.+.|..+-++.++..+...|..|... ...=. ...|..++.+.+...+-... .....+.
T Consensus 502 l~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------------~~~~~~i~ir~ll~~lp~~~------~~~~~~~ 562 (696)
T TIGR02110 502 LLLNGPRSPMRAVFSVALALLALAAPMLAQPAAN-------------RASAPSIPIRQLLAALPERL------LKSLPAQ 562 (696)
T ss_pred EEcCCCchhHHHHHHHHHHHHhCCCccccccccc-------------CCCCccchHHHHHHhchHhh------ccCcccc
Confidence 999999999999999999999987431 11000 00022222222222111100 0000000
Q ss_pred CHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEECCCCCeEEEEecccCCCCccc
Q 001730 728 SLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNS 807 (1019)
Q Consensus 728 t~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (1019)
.+. +.. .....+ + ..+ +......++..+.. ..+.+... . .+.. +..+..++..++
T Consensus 563 --~~~--~~~-----~~~~~~-----~-~~~---~~~~l~~~~~~~~~--~~~~~~~~-~-~~~~---~~~~~~~~~e~a 617 (696)
T TIGR02110 563 --QDD--WLA-----ARWGAA-----T-QLA---QRVALQLSPGTADL--ARPTPLPA-R-LGRG---WVPLACDGGEQA 617 (696)
T ss_pred --ccc--hhh-----hhcccc-----h-hHH---HHHHHHhCCCCCcc--CCCCCCCc-c-cccc---eEeccCCCCCcE
Confidence 000 100 011111 1 112 22333333322110 00000000 0 1111 122344444444
Q ss_pred eeEEEEEEeccccCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHHHHHH
Q 001730 808 VIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERI 887 (1019)
Q Consensus 808 ~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~lss~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~v~s~~~~~~~~~~~i 887 (1019)
. + .+|+. +..+..+.++..+|++++..+||+.||.+.||||+|+|++....|..|+.|.+||+..++.++...|
T Consensus 618 l-l-lf~p~----~~~~~~~~aa~rlla~l~~~~f~qrlRve~qlGY~v~~~~~~~~~~~gllf~~QSP~~~~~~l~~h~ 691 (696)
T TIGR02110 618 L-L-LFCPL----PTADVASEAAWRLLAQLLEPPFFQRLRVELQLGYVVFCRYRRVADRDGLLFALQSPDASARELLQHI 691 (696)
T ss_pred E-E-EEecC----CCCCHHHHHHHHHHHHHhchhHHHHHHHhhccceEEEEeeEEcCCcceeEEEEeCCCCCHHHHHHHH
Confidence 4 4 48888 7889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 001730 888 DNFI 891 (1019)
Q Consensus 888 ~~~l 891 (1019)
+.|+
T Consensus 692 ~~fl 695 (696)
T TIGR02110 692 KRFL 695 (696)
T ss_pred HHHh
Confidence 9987
No 6
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=100.00 E-value=2.9e-54 Score=491.53 Aligned_cols=836 Identities=16% Similarity=0.137 Sum_probs=564.4
Q ss_pred eeEEEEEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHh-cCCcceeeeCCCceEEEEEe-ChhhHHHHH
Q 001730 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSK-HGGSSNAYTETEHTCYHFEI-KREFLKGAL 175 (1019)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~-~g~~~na~t~~~~t~~~~~~-~~~~l~~~L 175 (1019)
...++++|++ .|.+..|+||.|||++||||++||-++.|..++.+ ++..+||+|+.|+|+|.+++ ..++|-++|
T Consensus 42 ~~vFsi~F~T----~p~dstGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~NA~T~~D~T~YP~sS~~~~Df~NLl 117 (978)
T COG1026 42 NNVFSIAFKT----EPHDSTGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLNAFTFPDKTVYPASSANEKDFYNLL 117 (978)
T ss_pred CceEEEEeec----CCCCCCCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHhhccCCCcceeeccccCcchHHHHH
Confidence 6677777765 78889999999999999999999999999999976 56779999999999999985 568999999
Q ss_pred HHHHhhccCCCCChhHHHHH--------------HHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcchh
Q 001730 176 MRFSQFFISPLMKVEAMERE--------------VLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIG 241 (1019)
Q Consensus 176 ~~l~~~~~~P~~~~~~~~~e--------------~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~ 241 (1019)
+++.|.+++|.+.++.|.+| +++|.+||++...++..++++.+++.+||+..|+..++|.+..|..
T Consensus 118 ~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~~~~~~~slfp~~ty~~~SGG~P~~I~~ 197 (978)
T COG1026 118 SVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVLSRAMQQSLFPGTTYGVNSGGDPKNIPD 197 (978)
T ss_pred HHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHHHHHHHHhhCCCccccccCCCCcccccc
Confidence 99999999999999999988 6899999999999999999999999999999999999999999999
Q ss_pred hhhcCccHHHHHHHHHHhccCCCCcEEEEEcCCCHHHHHHHHHHH-cccccCCCCCCCCcccccccccc-ceEEE---E-
Q 001730 242 AMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVEL-FANVRKGPQIKPQFTVEGTIWKA-CKLFR---L- 315 (1019)
Q Consensus 242 ~~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~-f~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~- 315 (1019)
++++++++||++||+|+|++++++|+++++++...+++. +...+......+.. ....+.. .+... +
T Consensus 198 ------LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~~~~i~--~~~~~~~~~~~~~~ypi~ 269 (978)
T COG1026 198 ------LTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKRELDVPIP--DQKAFKKPRRKVLEYPIS 269 (978)
T ss_pred ------cCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhccccccccCCCCC--cccccCcccccceeeccC
Confidence 999999999999999999999999999999999999876 66655444222111 1122221 11111 1
Q ss_pred --EeccccceEEEEEecCCCchhhhcChHHHHHHHhcCCCCCcHHHHHHhcCcc-ccccccccCCCCCCcccceEEEEEE
Q 001730 316 --EAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWA-TSISAGVGDEGMHRSSIAYIFVMSI 392 (1019)
Q Consensus 316 --~~~~~~~~v~i~~~~~~~~~~~~~~~~~~l~~lLg~~~~~~L~~~Lr~~gl~-~~i~~~~~~~~~~~~~~~~~~~i~~ 392 (1019)
..+..+..+.+.|..+...+.++..++.+|..+|-+...+.|.+.|.+.|+. ..++..+.. +.. .+.|.|.+
T Consensus 270 ~~~~de~q~~~~lsWl~~~~~d~~~~lal~vL~~iLl~~~asPl~~~liesglg~~~~~g~~~~---~~~--~~~f~v~~ 344 (978)
T COG1026 270 FDEEDEDQGLLSLSWLGGSASDAEDSLALEVLEEILLDSAASPLTQALIESGLGFADVSGSYDS---DLK--ETIFSVGL 344 (978)
T ss_pred CCCCCCceeEEEEEEecCCcccHHHHHHHHHHHHHHccCcccHHHHHHHHcCCCcccccceecc---ccc--eeEEEEEe
Confidence 1234577888999999988888999999999999987777799999988887 333321221 111 22555554
Q ss_pred EeChhhhhcHHHHHHHHHHHHHHHHHcCCchHHHHHHhhhcccceecccCCChHHHH--HHHH-HhccCCCccccccccc
Q 001730 393 HLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYA--AELA-GNLLIYPAEHVIYGEY 469 (1019)
Q Consensus 393 ~~~~~g~~~~~~v~~~i~~~l~~l~~~~~~~~~l~~~k~~~~~~~~~~~~~~~~~~~--~~l~-~~~~~~~~~~~l~~~~ 469 (1019)
+....++++++.+.+++.++.+.+.|++++.++.++.+...+.+-. ...+.... ..+. ..++..+|.+.|....
T Consensus 345 --~gv~~ek~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~-~s~pfgl~l~~~~~~gw~~G~dp~~~Lr~~~ 421 (978)
T COG1026 345 --KGVSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEV-KSYPFGLGLMFRSLYGWLNGGDPEDSLRFLD 421 (978)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhh-cCCCccHHHHHHhccccccCCChhhhhhhHH
Confidence 3333368999999999999999999999999999988776665432 22332222 2222 2233456776665544
Q ss_pred cccC---CCHH--HHHHHHhc-cCcCc-eEEEEEeCCCC-CCCCccccceeccccccccCChhHHHhhcCCCC----CCC
Q 001730 470 MYEV---WDEE--MIKHLLGF-FMPEN-MRIDVVSKSFA-KSQDFHYEPWFGSRYTEEDISPSLMELWRNPPE----IDV 537 (1019)
Q Consensus 470 ~i~~---~t~e--~i~~~~~~-l~~~~-~~i~i~~p~~~-~~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~----~~~ 537 (1019)
.++. .-.. .+++++++ +..++ ..++++.|+.. ..+..+.+.. .+.--...+.++.++++.+... .+
T Consensus 422 ~~~~Lr~~le~~~~fe~LI~ky~l~N~h~~~v~~~Ps~~~~~~~ekee~e-~L~~~~~~l~de~~~ki~~~~~~lke~Q- 499 (978)
T COG1026 422 YLQNLREKLEKGPYFEKLIRKYFLDNPHYVTVIVLPSPELEEKLEKEERE-LLQKRSSELTDEDLEKIIKDSKKLKERQ- 499 (978)
T ss_pred HHHHHHHhhhcChHHHHHHHHHhhcCCccEEEEEecChHHHHHHHHHHHH-HHHHHHhhcCHHHHHHHHHHHHHHHHhh-
Confidence 3332 2222 38999998 44444 66677788752 0111111110 0111123333333332211000 00
Q ss_pred CcCCC-CCCCCCCCCceecccCCCCCCCCCCCCeEeeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHH
Q 001730 538 SLQLP-SQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTEL 616 (1019)
Q Consensus 538 ~~~lP-~~n~fip~~~~l~~~~~~~~~~~~~~P~~i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l 616 (1019)
.-..| ..+..+|+ +.+.++....+ +.+......+..+|.+++-.+ ...+++++..+....+.....++.|
T Consensus 500 ~~~dse~~~~~lP~-l~~~dvp~~~~----k~~l~~~~~~~~~v~~~~~~t----n~i~yl~~~~~~~~l~~~llpyL~L 570 (978)
T COG1026 500 DQPDSEEDLATLPT-LKLGDVPDPIE----KTSLETEVSNEAKVLHHDLFT----NGITYLRLYFDLDMLPSELLPYLPL 570 (978)
T ss_pred cCCCchhhhhhccc-cchhcCCCccc----ccceeeeccCCcceEEeecCC----CCeEEEEEEeecCCCChhhhhhHHH
Confidence 00011 22234554 44444433322 244445556777775554322 5678888888877777888899999
Q ss_pred HHHHHHHHHHH-H-------hHhhhhcCcEEEEEEeC---------ceeEEEEeecCCCHHHHHHHHHHHHhcCCC-CHH
Q 001730 617 FIHLLKDELNE-I-------IYQASVAKLETSVSIFS---------DKLELKVYGFNDKLPVLLSKILAIAKSFLP-SDD 678 (1019)
Q Consensus 617 ~~~~l~~~l~e-~-------~~~~~~~g~~~~~~~~~---------~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~-~~~ 678 (1019)
|+.++....++ + ......+|++.+.++.. ..+.|++..++.+..++++++.++|.+..| |.+
T Consensus 571 ~~~~l~~lgt~~~~y~e~~~~i~~~TGgis~~~~~~~~~~~~~~~~~~~~i~~K~l~~k~~~~~~~i~~~l~~~~F~D~~ 650 (978)
T COG1026 571 FAFALTNLGTETYSYKELLNQIERHTGGISVSLSVDTDPGDDGEYRPSFSISGKALRSKVEKLFELIREILANTDFHDRE 650 (978)
T ss_pred HHHHHHhcCCCCcCHHHHHHHHHHHhCCceeeEeeccCCCccccccceEEEEEEehhhhhhHHHHHHHHHHhcCCcCcHH
Confidence 99999886543 1 12234578888877754 358888999999999999999999999999 788
Q ss_pred HHHHHHHHHHHHHHhcccC-hhhHHHHHHHHhhcCC--------CCCHHHHHHHhcc-----CC---HHHHHHHHHHHHh
Q 001730 679 RFKVIKEDVVRTLKNTNMK-PLSHSSYLRLQVLCQS--------FYDVDEKLSILHG-----LS---LADLMAFIPELRS 741 (1019)
Q Consensus 679 ~f~~~k~~~~~~l~~~~~~-p~~~a~~~~~~ll~~~--------~~~~~~~~~~l~~-----it---~~dl~~~~~~~~~ 741 (1019)
++..+.++.+..+.+...+ ++.+|.....+-++.. +.+....+..|.+ .. .+.|++.+++++.
T Consensus 651 Rlkell~q~~~~l~~~vr~sG~~~A~~~~~s~~~~~~~l~e~~~Gl~q~k~i~~l~~~~~~~~~~ei~~kL~~l~~~i~~ 730 (978)
T COG1026 651 RLKELLEQYLSDLTSSVRNSGHSIASSLANSRLSSAGALKELLNGLSQVKFLRELSSNFEENFEKEIADKLQALRKKIFQ 730 (978)
T ss_pred HHHHHHHHHHhhhHHhhhccchHHHHHHhhcccccchhHHHHhcChhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhh
Confidence 9999999999999999888 8888877766655432 1111222222221 11 4578888889999
Q ss_pred hhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCc---cccccceeEECCC--CCeEEEEecccCCCCccceeEEEEEEe
Q 001730 742 QLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPI---EMRHQECVICLPS--GANLVRNVSVKNKCETNSVIEVLYFQI 816 (1019)
Q Consensus 742 ~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~ 816 (1019)
..++.+++.|+++.... .+++-+..+.+.-.+. ...+......+.. ....+ .+.|.+.+.... .+..
T Consensus 731 ~~n~~i~i~~~~~~~~~--~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----i~~p~a~~~l~f--s~~~ 802 (978)
T COG1026 731 TNNLRIAIIGDIDKILD--LLENPLLKFLEHLLPGFELPTPPKNPHLDLISSLSEATI----IPSPVAYNALAF--SIGG 802 (978)
T ss_pred cCceEEEEecChhhhHH--HHHHHhhhhhcccCcccccCCCCCCcchhhhccccceEE----eccHHHHHHHhh--hccC
Confidence 99998999999765432 2223222222110000 0001111111111 11111 122222222222 1112
Q ss_pred ccccCcccHHHHHHHHHHHHHhch-hhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHHHHHHHHHHHHHH
Q 001730 817 EQEKGMELTRLKALIDLFDEILEE-PFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLD 895 (1019)
Q Consensus 817 ~~~~~~~~~~~~~~~~ll~~~lss-~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~v~s~~~~~~~~~~~i~~~l~~~~ 895 (1019)
....+++.+++.++..++++ .|+..||++ |+||+.+++.....|..++. |. ++|+ +.+..+.+.+.+.
T Consensus 803 ----~~y~hpd~~~l~vls~~L~~~~lw~~IR~~-GGAYGa~as~~~~~G~f~f~----sY-RDPn-~~kt~~v~~~~v~ 871 (978)
T COG1026 803 ----LPYTHPDYAALQVLSEYLGSGYLWNKIREK-GGAYGASASIDANRGVFSFA----SY-RDPN-ILKTYKVFRKSVK 871 (978)
T ss_pred ----CCCCCccchHHHHHHHHhccchhHHHHHhh-ccccccccccccCCCeEEEE----ec-CCCc-HHHHHHHHHHHHH
Confidence 45677888999999998865 788999997 77999999888877765543 32 4454 4455555555555
Q ss_pred HHH-hCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHH-HHHHHhcCCCCCCchHHHHHHHhcCCHHHHHHHHHHhcccCCC
Q 001730 896 ELL-EGLDDESFENYRSGLMAKLLEKDPSLTYESNR-FWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSP 973 (1019)
Q Consensus 896 ~~~-~~ise~el~~~k~~l~~~~~~~~~s~~~~~~~-~~~~i~~~~~~~~~~~~~~~~i~~vt~edv~~~~~~~l~p~~~ 973 (1019)
.+. +.++++++++++-++++.+... .++..++.. +...... ...+.++.++++|.+||++||.++.++|+.+-
T Consensus 872 ~l~s~~~~~~d~~~~ilg~i~~~d~p-~sp~~~~~~s~~~~~sg--~~~~~~qa~re~~l~vt~~di~~~~~~yl~~~-- 946 (978)
T COG1026 872 DLASGNFDERDLEEAILGIISTLDTP-ESPASEGSKSFYRDLSG--LTDEERQAFRERLLDVTKEDIKEVMDKYLLNF-- 946 (978)
T ss_pred HHHcCCCCHHHHHHHHHHhhcccccc-cCCcceehhhHHHHHhc--CCHHHHHHHHHHHhcCcHHHHHHHHHHHHhcc--
Confidence 444 4899999999999999998763 444444432 2233322 24578899999999999999999999999642
Q ss_pred CccEEEEEEecCCCCc
Q 001730 974 KCRRLAVRVWGCNTNI 989 (1019)
Q Consensus 974 ~~~~~~v~v~G~~~~~ 989 (1019)
...-+++|+|.+..+
T Consensus 947 -~~e~~i~~~~~~e~~ 961 (978)
T COG1026 947 -SSENSIAVFAGEEKP 961 (978)
T ss_pred -cccceEEEEechhhh
Confidence 234455555544433
No 7
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-53 Score=454.13 Aligned_cols=834 Identities=14% Similarity=0.071 Sum_probs=586.7
Q ss_pred CCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHh-cCCcceeeeCCCceEEEEE-eChhhHHHHHHHHHhhcc
Q 001730 106 GMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSK-HGGSSNAYTETEHTCYHFE-IKREFLKGALMRFSQFFI 183 (1019)
Q Consensus 106 ~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~-~g~~~na~t~~~~t~~~~~-~~~~~l~~~L~~l~~~~~ 183 (1019)
.++.+..|++..|+.|+|||.++|||.|||-++.|.++|.+ +...+||+|..|+|.|.|+ +.+++|.++.+++.|..+
T Consensus 78 sI~FrTpp~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmNAfT~pD~T~yPfattN~kDf~NL~dVYLDAtf 157 (998)
T KOG2019|consen 78 SIVFRTPPKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMNAFTAPDYTFYPFATTNTKDFYNLRDVYLDATF 157 (998)
T ss_pred EEEeecCCCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHhhccCCCcceeecccCChHHHHHHHHHhhhccc
Confidence 33445678899999999999999999999999999999986 4668999999999999997 567899999999999999
Q ss_pred CCCCChhHHHHH------------------HHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcchhhhhc
Q 001730 184 SPLMKVEAMERE------------------VLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEK 245 (1019)
Q Consensus 184 ~P~~~~~~~~~e------------------~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~ 245 (1019)
.|.+.+.+|.+| +++|.+||++..+++.+.+++.++..++|++.|+-.+.|++-.|+.
T Consensus 158 fPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~~~Qq~L~p~~tYgv~SGGDPl~Ipd---- 233 (998)
T KOG2019|consen 158 FPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYIFGMLFQQALFPENTYGVNSGGDPLDIPD---- 233 (998)
T ss_pred chHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccChhHHHHHHHHHhhCccccccccCCCCcccCcc----
Confidence 999999999988 7899999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHhccCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCCCCccccccccccceEEEEE-------ec
Q 001730 246 GINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLE-------AV 318 (1019)
Q Consensus 246 ~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 318 (1019)
++.++|++||++||||+|+.++.+|+++++++.+++++.|....+.....+.. ....+...+.++.. ..
T Consensus 234 --Lt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~kv~--~qk~f~kp~rvve~~p~d~~~~p 309 (998)
T KOG2019|consen 234 --LTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSSKVT--FQKLFDKPRRVVEKGPADPGDLP 309 (998)
T ss_pred --ccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhcccccccccCccc--cccccccCceeeeecCCCCCCCc
Confidence 99999999999999999999999999999999999998776654433222211 12334333333221 12
Q ss_pred cccceEEEEEecCCCchhhhcChHHHHHHHhcCCCCCcHHHHHHhcCccccccccccCCCCCCcccceEEEEEEEeChhh
Q 001730 319 KDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSG 398 (1019)
Q Consensus 319 ~~~~~v~i~~~~~~~~~~~~~~~~~~l~~lLg~~~~~~L~~~Lr~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~g 398 (1019)
..+....+.|-.+...+.++..++.+|++++-++..+.+++.|.+.|+....+...+... .+..+.|+|.+.--.
T Consensus 310 ~Kq~~~s~s~L~~~p~d~~etfaL~~L~~Ll~~gpsSp~yk~LiESGLGtEfsvnsG~~~---~t~~~~fsVGLqGvs-- 384 (998)
T KOG2019|consen 310 KKQTKCSNSFLSNDPLDTYETFALKVLSHLLLDGPSSPFYKALIESGLGTEFSVNSGYED---TTLQPQFSVGLQGVS-- 384 (998)
T ss_pred cceeEEEEEeecCCchhHHHHHHHHHHHHHhcCCCccHHHHHHHHcCCCcccccCCCCCc---ccccceeeeeecccc--
Confidence 345667788888888888899999999999999888889999999998866554433321 123458888774322
Q ss_pred hhcHHHHHHHHHHHHHHHHHcCCchHHHHHHhhhcccceecccCCChHHHHHHHHHhc-cCCCccccccccccccC----
Q 001730 399 LEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNL-LIYPAEHVIYGEYMYEV---- 473 (1019)
Q Consensus 399 ~~~~~~v~~~i~~~l~~l~~~~~~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~l~~~~~i~~---- 473 (1019)
.++++.+.+.|...++++...||+.+.+++..+++..+.+.+...-...++..++..+ +..+|-+++.....++.
T Consensus 385 eediekve~lV~~t~~~lae~gfd~drieAil~qiEislk~qst~fGL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~ 464 (998)
T KOG2019|consen 385 EEDIEKVEELVMNTFNKLAETGFDNDRIEAILHQIEISLKHQSTGFGLSLMQSIISKWINDMDPFEPLKFEEQLKKLKQR 464 (998)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhhhhhccccchhHHHHHHHhhhhccCCCccchhhhhhHHHHHHHH
Confidence 2689999999999999999999999999999888777766544322234444555444 34567777766544432
Q ss_pred ---CCHHHHHHHHhc-cC-cCceEEEEEeCCCC-CCCCccccceeccccccccCChhHHHhhcCCCC-CCCCcCCCCCCC
Q 001730 474 ---WDEEMIKHLLGF-FM-PENMRIDVVSKSFA-KSQDFHYEPWFGSRYTEEDISPSLMELWRNPPE-IDVSLQLPSQNE 546 (1019)
Q Consensus 474 ---~t~e~i~~~~~~-l~-~~~~~i~i~~p~~~-~~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~-~~~~~~lP~~n~ 546 (1019)
-+..-++.++++ +. +....++-+-|+.+ .....++|+ -..+-.+..+.++.+..+..... ....-+-|..-.
T Consensus 465 l~ek~~~lfq~lIkkYilnn~h~~t~smqpd~e~~~~~~~eE~-tkL~ek~~alteeD~~ei~k~~~eL~~kQ~tp~dls 543 (998)
T KOG2019|consen 465 LAEKSKKLFQPLIKKYILNNPHCFTFSMQPDPEFAEKLEQEEA-TKLEEKKAALTEEDLAEIAKAGEELREKQSTPEDLS 543 (998)
T ss_pred HhhhchhHHHHHHHHHHhcCCceEEEEecCCchhhHHHHHHHH-HHHHHHHhhCCHHHHHHHHHHHHHHHHhhCCccccc
Confidence 245668889998 43 33344455566531 011111111 12333445565555554432110 011222345556
Q ss_pred CCCCCceecccCCCCCCCCCCCCeEeeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 001730 547 FIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN 626 (1019)
Q Consensus 547 fip~~~~l~~~~~~~~~~~~~~P~~i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~ 626 (1019)
|+|+ +.+.++....+ -.|..+.+.+|+++.++-..+ .+.+|++..++....+.+...+..|||+.+.....
T Consensus 544 ClPt-L~vsDIp~~~~----~~~~~v~dingvkv~~~dl~t----ngi~Y~r~~~~l~~~p~eL~PylPlfc~sll~lGt 614 (998)
T KOG2019|consen 544 CLPT-LNVSDIPKTIP----YTKLEVGDINGVKVQRCDLFT----NGITYTRVVFDLNSLPEELLPYLPLFCQSLLNLGT 614 (998)
T ss_pred cccc-cccccCCCCCC----ccceeeeeccCceeEEeeccC----CceEEEEEeeccccCcHHhhcchHHHHHHHHhcCC
Confidence 7775 66655544432 246667888999995554333 57899999998888888888999999998877532
Q ss_pred ------H--HhHhhhhcCcEEEEEEeC--------ceeEEEEeecCCCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHH
Q 001730 627 ------E--IIYQASVAKLETSVSIFS--------DKLELKVYGFNDKLPVLLSKILAIAKSFLPS-DDRFKVIKEDVVR 689 (1019)
Q Consensus 627 ------e--~~~~~~~~g~~~~~~~~~--------~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~-~~~f~~~k~~~~~ 689 (1019)
+ .......+|++.+..+.. -++.++-+++..+.+.+++++..++.++.|. ++.|.....+...
T Consensus 615 ~~lsf~el~qqI~rkTGGiS~~p~~~s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkfkvlvk~s~s 694 (998)
T KOG2019|consen 615 GDLSFVELEQQIGRKTGGISVSPLVSSDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKFKVLVKQSAS 694 (998)
T ss_pred CcccHHHHHHHhhhhcCceeecceeccCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHHHHHHHHHHH
Confidence 2 233456789988887764 2344555556678999999999999999996 6889999999999
Q ss_pred HHHhcccC-hhhHHHHHHHHhhcCCCCCHH--------HHHHHhccCC-------HHHHHHHHHHHHhhhceEEEEecCC
Q 001730 690 TLKNTNMK-PLSHSSYLRLQVLCQSFYDVD--------EKLSILHGLS-------LADLMAFIPELRSQLYIEGLCHGNL 753 (1019)
Q Consensus 690 ~l~~~~~~-p~~~a~~~~~~ll~~~~~~~~--------~~~~~l~~it-------~~dl~~~~~~~~~~~~~~~~i~Gni 753 (1019)
++.+...+ .+..|...+...+....|-.+ ..+..|.... .+.|.+..+.++..+++.+.|..+-
T Consensus 695 ~~~n~i~dsGH~~A~~rs~a~l~~ag~i~EqlgGl~ql~fl~~L~~~~d~d~~~i~~kL~eIrk~ll~~ng~~~~itAd~ 774 (998)
T KOG2019|consen 695 RMTNGIADSGHGFAAARSAAMLTPAGWISEQLGGLSQLEFLHRLEEKVDNDWEPIVSKLTEIRKSLLNTNGMIVNITADP 774 (998)
T ss_pred HhhccCCcccchhHhhhhhcccCcccchHhHhcchHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence 99998887 788887777777766555322 2233333322 3456666777888999999998774
Q ss_pred -CHHHHHHHHHHHHhhhc-CCCCCccccccceeEECCCCCeEEEEecccCCCCccceeEEEEEEeccccCcccHHHHHHH
Q 001730 754 -SQEEAIHISNIFKSIFS-VQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALI 831 (1019)
Q Consensus 754 -~~~~a~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 831 (1019)
....+.+.+++++..++ +.|.+....-. ..++-....+ .+..+. ..++.+-- .+.. .+..+++-+.+
T Consensus 775 ~q~~~vEkav~kFl~~lp~e~p~g~~st~d---~r~p~~~~~i-~~~~P~-fqvnyvgk--a~~~----vpyt~~d~asl 843 (998)
T KOG2019|consen 775 KQLTNVEKAVEKFLDSLPRENPSGSKSTWD---ARLPLRSEAI-RVVIPT-FQVNYVGK--AGLG----VPYTHPDGASL 843 (998)
T ss_pred ccchhHHHHHHHHHHhccccCCCCCccCcc---ccCCCCceeE-EEeccc-cchhhhhh--hccc----ccCCCCCCcHH
Confidence 33566788899998887 43332111111 1122222111 111111 11222211 2212 45566777888
Q ss_pred HHHHHHhch-hhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHHHHHHHHHHHHHHHHH-hCCCHHHHHHH
Q 001730 832 DLFDEILEE-PFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELL-EGLDDESFENY 909 (1019)
Q Consensus 832 ~ll~~~lss-~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~v~s~~~~~~~~~~~i~~~l~~~~~~~-~~ise~el~~~ 909 (1019)
.+|+.+++. .|+.++|++ |.+|+-+|.+....|+.+|. |. ++|.- .+.++.|=..-.-.+ ..++++++.+|
T Consensus 844 ~vlS~~lt~k~Lh~evRek-GGAYGgg~s~~sh~GvfSf~----SY-RDpn~-lktL~~f~~tgd~~~~~~~~~~dldeA 916 (998)
T KOG2019|consen 844 QVLSKLLTNKWLHDEVREK-GGAYGGGCSYSSHSGVFSFY----SY-RDPNP-LKTLDIFDGTGDFLRGLDVDQQDLDEA 916 (998)
T ss_pred HHHHHHHHHHHHHHHHHHh-cCccCCccccccccceEEEE----ec-cCCch-hhHHHhhcchhhhhhcCCccccchhhh
Confidence 999998876 577999998 56999999999988885553 43 55553 345555443333233 36999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCCC
Q 001730 910 RSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTN 988 (1019)
Q Consensus 910 k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~vt~edv~~~~~~~l~p~~~~~~~~~v~v~G~~~~ 988 (1019)
|-++++..... ..+.... +...++ +...+.++..++.|.+++..|+.++|.+|+. ...+...|.|.|+++.
T Consensus 917 kl~~f~~VDap-~~P~~kG--~~~fl~--gvtDemkQarREqll~vSl~d~~~vae~yl~---~~~~~~~vav~g~E~~ 987 (998)
T KOG2019|consen 917 KLGTFGDVDAP-QLPDAKG--LLRFLL--GVTDEMKQARREQLLAVSLKDFKAVAEAYLG---VGDKGVAVAVAGPEDI 987 (998)
T ss_pred hhhhcccccCC-cCCcccc--hHHHHh--cCCHHHHHHHHHHHHhhhHHHHHHHHHHHhc---cCCcceEEEeeCccCc
Confidence 99999997753 3443333 212222 2346788899999999999999999999994 3445788888888765
No 8
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=9.1e-47 Score=433.86 Aligned_cols=411 Identities=21% Similarity=0.217 Sum_probs=341.5
Q ss_pred CcCccccccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhccccccccc
Q 001730 17 SPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQT 96 (1019)
Q Consensus 17 ~~~~~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (1019)
.+.+.. ++.++|+||+++++.+++.. +
T Consensus 11 ~~~~~~-~~~~~L~nGl~~~~~~~~~~--------------~-------------------------------------- 37 (438)
T COG0612 11 LPALPG-LQVFTLPNGLRVITYPNPTA--------------P-------------------------------------- 37 (438)
T ss_pred cccccc-ceEEEcCCCCEEEEEeCCCC--------------C--------------------------------------
Confidence 344444 89999999999999999987 6
Q ss_pred ceeEEEEEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHH
Q 001730 97 KKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALM 176 (1019)
Q Consensus 97 ~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~ 176 (1019)
.+++.+++++|+.+++.+..|+|||+|||+|.|+++++. .++.+.++..||..||+|+.|+|.|++++.+++++.+|+
T Consensus 38 -~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~-~~i~~~~~~~G~~~na~ts~d~t~y~~~~l~~~~~~~l~ 115 (438)
T COG0612 38 -TVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPS-AELAEAFEKLGGQLNAFTSFDYTVYYLSVLPDNLDKALD 115 (438)
T ss_pred -EEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCCh-HHHHHHHHHhcCeeeccccchhhhhhhhhchhhhHHHHH
Confidence 999999999999999999999999999999999999997 489999999999999999999999999988999999999
Q ss_pred HHHhhccCCCCChhHHHHHHHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcchhhhhcCccHHHHHHHH
Q 001730 177 RFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKL 256 (1019)
Q Consensus 177 ~l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f 256 (1019)
++++++.+|.|++++|++||+++.+|++...++|.+++...+...+|++|||++++.|+.++|.+ +++++|++|
T Consensus 116 llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~e~I~~------it~~dl~~f 189 (438)
T COG0612 116 LLADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTEESIEA------ITREDLKDF 189 (438)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCHHHHHh------CCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHhccCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCCCCccccccccccceEEEEE----eccccceEEEEEecCC
Q 001730 257 YMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLE----AVKDVHILDLTWTLPC 332 (1019)
Q Consensus 257 ~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~i~~~~~~ 332 (1019)
|++||+|+||+|+|+||++.+++.++++++|+.|+. ..++.... ..++....+++.+. +...+..+.++++.+.
T Consensus 190 ~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 267 (438)
T COG0612 190 YQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPG-AAPPPKIP-PEPPLGPERVVRVNDPEQPDLEQAWLALGYPGPD 267 (438)
T ss_pred HHHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCc-cCCCCCCC-CccccCCCceEEecCCCCchhhhhhhhccccCcC
Confidence 999999999999999999999999999999999997 22222211 21333344444432 2233456666666665
Q ss_pred CchhhhcChHHHHHHHhcCCCCCcHHHHHH-hcCccccccccccCCCCCCcccceEEEEEEEeChhhhhcHHHHHHHHHH
Q 001730 333 LHQEYLKKSEDYLAHLLGHEGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQ 411 (1019)
Q Consensus 333 ~~~~~~~~~~~~l~~lLg~~~~~~L~~~Lr-~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~v~~~i~~ 411 (1019)
.....++.++.+++.+||++..++|+..+| ++|++|++++...... +.|.+.+.+.+.. .+.+.+.+.|.+
T Consensus 268 ~~~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~i~~ 339 (438)
T COG0612 268 YDSPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFLS-----DSGLFSIYAGTAP---ENPEKTAELVEE 339 (438)
T ss_pred cCcchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeecccccccc-----ccCCceEEEEecC---CChhhHHHHHHH
Confidence 443235578899999999988999999999 8899999987444321 2347777777766 567777777777
Q ss_pred HHHHHHHcC---CchHHHHHHhhhcccceecccCCChHHHHHHHHHhccC-CCccccccccccccCCCHHHHHHHHhc-c
Q 001730 412 YIKLLRQVS---PQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLI-YPAEHVIYGEYMYEVWDEEMIKHLLGF-F 486 (1019)
Q Consensus 412 ~l~~l~~~~---~~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~l~~~~~i~~~t~e~i~~~~~~-l 486 (1019)
.+..+++.+ +++++++.+|......+....+ ++...+..+...... .+..........++++|+++|++++++ +
T Consensus 340 ~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~~~ 418 (438)
T COG0612 340 ILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLD-SPSSIAELLGQYLLLGGSLITLEELLERIEAVTLEDVNAVAKKLL 418 (438)
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccC-CHHHHHHHHHHHHHhcCCccCHHHHHHHHHhcCHHHHHHHHHHhc
Confidence 777776664 8999999999888887766554 556566666655444 344555555678999999999999999 7
Q ss_pred CcCceEEEEEeCC
Q 001730 487 MPENMRIDVVSKS 499 (1019)
Q Consensus 487 ~~~~~~i~i~~p~ 499 (1019)
.+++..+++++|.
T Consensus 419 ~~~~~~~~~~~p~ 431 (438)
T COG0612 419 APENLTIVVLGPE 431 (438)
T ss_pred CCCCcEEEEEccc
Confidence 7778999999986
No 9
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-45 Score=372.13 Aligned_cols=408 Identities=15% Similarity=0.128 Sum_probs=342.7
Q ss_pred cccccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhcccccccccceeE
Q 001730 21 KRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAA 100 (1019)
Q Consensus 21 ~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (1019)
.+..++.+|+||++|..-++ .. . ..+
T Consensus 31 ~P~t~vttL~NGlrVaTE~~-~a--------------~---------------------------------------TAT 56 (467)
T KOG0960|consen 31 VPETEVTTLPNGLRVATEHN-SA--------------S---------------------------------------TAT 56 (467)
T ss_pred CCcceEEEcCCCcEEEeccC-CC--------------c---------------------------------------ceE
Confidence 45678899999999999888 44 3 999
Q ss_pred EEEEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHHHHh
Q 001730 101 AAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQ 180 (1019)
Q Consensus 101 ~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~l~~ 180 (1019)
+.+++.+||++|.+...|.|||||||+|+|+++.+. ..+...+++.|+.+||||++|+|+|++.+.+++++.++++|+|
T Consensus 57 VGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~-~alElEieniGahLNAytSReqT~yyakal~~dv~kavdiLaD 135 (467)
T KOG0960|consen 57 VGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQ-AALELEIENIGAHLNAYTSREQTVYYAKALSKDVPKAVDILAD 135 (467)
T ss_pred EEEEeccCccccccccccHHHHHHHHHhcCCCcchh-HHHHHHHHHHHHHhcccccccceeeehhhccccchHHHHHHHH
Confidence 999999999999999999999999999999999998 5899999999999999999999999999999999999999999
Q ss_pred hccCCCCChhHHHHHHHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcchhhhhcCccHHHHHHHHHHhc
Q 001730 181 FFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNY 260 (1019)
Q Consensus 181 ~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~ 260 (1019)
++.+..+.+..|++||++|..|++....+...++++.++..+|+++|+++.+.|..+.|++ ++++||.+|-++|
T Consensus 136 Ilqns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~enI~s------i~r~DL~~yi~th 209 (467)
T KOG0960|consen 136 ILQNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPSENIKS------ISRADLKDYINTH 209 (467)
T ss_pred HHHhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChhhhhhh------hhHHHHHHHHHhc
Confidence 9999999999999999999999998888888899999999999999999999999999999 9999999999999
Q ss_pred cCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCCCCccccccccccceEEEEEeccccceEEEEEecCCCchhhhcC
Q 001730 261 YQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKK 340 (1019)
Q Consensus 261 y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 340 (1019)
|.++||+|+.+|.++++++.+++++|||+++....+......+.+.+.+..+....+..|..++.|++.+.+.... ++.
T Consensus 210 Y~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~~~~~~~~~~~~~~FtgsEvR~rdd~lP~a~~AiAVEG~~w~~p-D~~ 288 (467)
T KOG0960|consen 210 YKASRMVLAAAGGVKHEELVKLAEKYFGDLSKLQTGDKVPLVPPARFTGSEVRVRDDDLPLAHIAIAVEGVSWAHP-DYF 288 (467)
T ss_pred ccCccEEEEecCCcCHHHHHHHHHHHcCCCcccccCcCCCCCCCccccCceeeecCCCCchhheeeeEecCCcCCc-cHH
Confidence 9999999999999999999999999999987533222211112234555555555566788899999988886543 678
Q ss_pred hHHHHHHHhcCC---------CCCcHHHHHHhcCccccccccccCCCCCCcccceEEEEEEEeChhhhhcHHHHHHHHHH
Q 001730 341 SEDYLAHLLGHE---------GRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQ 411 (1019)
Q Consensus 341 ~~~~l~~lLg~~---------~~~~L~~~Lr~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~v~~~i~~ 411 (1019)
++.+.+.++|+. .+++|.+.+-...++-++.+ ++.++. +.|+|++++.+.+ ...++.++..+..
T Consensus 289 ~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~~l~~sfqs-Fnt~Yk----DTGLwG~y~V~~~--~~~iddl~~~vl~ 361 (467)
T KOG0960|consen 289 ALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQDQLCHSFQS-FNTSYK----DTGLWGIYFVTDN--LTMIDDLIHSVLK 361 (467)
T ss_pred HHHHHHHHhhhhhcccCCccCCccHHHHHHHHHHHHHHHhh-hhcccc----cccceeEEEEecC--hhhHHHHHHHHHH
Confidence 999999999873 23456666666667766554 333333 4569999999843 2689999999999
Q ss_pred HHHHHHHcCCchHHHHHHhhhcccceecccCCChHHHHHHHHHhccCCCcc-ccccccccccCCCHHHHHHHHhc-cCcC
Q 001730 412 YIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAE-HVIYGEYMYEVWDEEMIKHLLGF-FMPE 489 (1019)
Q Consensus 412 ~l~~l~~~~~~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~i~~~t~e~i~~~~~~-l~~~ 489 (1019)
++.+|+. .+++.|++++|++++.++....+. ....+..++..++.++.. ..-+....|+++|..+|++++.+ +-..
T Consensus 362 eW~rL~~-~vteaEV~RAKn~Lkt~Lll~ldg-ttpi~ediGrqlL~~Grri~l~El~~rId~vt~~~Vr~va~k~iyd~ 439 (467)
T KOG0960|consen 362 EWMRLAT-SVTEAEVERAKNQLKTNLLLSLDG-TTPIAEDIGRQLLTYGRRIPLAELEARIDAVTAKDVREVASKYIYDK 439 (467)
T ss_pred HHHHHHh-hccHHHHHHHHHHHHHHHHHHhcC-CCchHHHHHHHHhhcCCcCChHHHHHHHhhccHHHHHHHHHHHhhcC
Confidence 9999976 699999999999999997765543 334688899888776532 33334668999999999999998 6677
Q ss_pred ceEEEEEeCC
Q 001730 490 NMRIDVVSKS 499 (1019)
Q Consensus 490 ~~~i~i~~p~ 499 (1019)
.+.+..+||.
T Consensus 440 ~iAia~vG~i 449 (467)
T KOG0960|consen 440 DIAIAAVGPI 449 (467)
T ss_pred Ccceeeeccc
Confidence 8888888885
No 10
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.1e-38 Score=334.51 Aligned_cols=832 Identities=14% Similarity=0.127 Sum_probs=500.9
Q ss_pred eeEEEEEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEe-ChhhHHHHHH
Q 001730 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEI-KREFLKGALM 176 (1019)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~-~~~~l~~~L~ 176 (1019)
.+.-++.|.+-..+ ..|+.|-|||++|+||++||-.+-+..+-...=+..||+|+.|+|.|.+++ -.+.|-.+|.
T Consensus 41 ~vhG~f~v~TEa~~----d~G~PHTLEHL~FMGSKkYP~kGvLd~~anr~l~dtNAwTDtD~T~YtLStag~dGFlklLP 116 (1022)
T KOG0961|consen 41 MVHGAFSVVTEADS----DDGLPHTLEHLVFMGSKKYPFKGVLDVIANRCLADTNAWTDTDHTAYTLSTAGSDGFLKLLP 116 (1022)
T ss_pred ceeeeEEeeeeecC----CCCCchhHHHHhhhccccCCcccHHHHhhcchhcccccccccCcceEEeecccccchHHHhH
Confidence 78878877765444 569999999999999999998644444444445789999999999999985 5788999999
Q ss_pred HHHhhccCCCCChhHHHHH----------HHHHHHHHHhhcCCHHHHHHHHHHhcCCC-CCCCCcCCcCchhcchhhhhc
Q 001730 177 RFSQFFISPLMKVEAMERE----------VLAVDSEFNQALQNDACRLQQLQCHTSQL-GHAFNKFFWGNKKSLIGAMEK 245 (1019)
Q Consensus 177 ~l~~~~~~P~~~~~~~~~e----------~~~v~~E~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~G~~~~l~~~~~~ 245 (1019)
++.+.+..|.++.+++..| .++|.+||+...+.-...+.+..++..|| .++|+..++|-...|+.
T Consensus 117 vy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~sgY~~eTGG~~knLR~---- 192 (1022)
T KOG0961|consen 117 VYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYPPFSGYAVETGGRLKNLRE---- 192 (1022)
T ss_pred HHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecCCCCCceeccCCChhhHHH----
Confidence 9999999999999999988 58999999988887778888888888875 89999999999999999
Q ss_pred CccHHHHHHHHHHhccCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCC-CCcccc----ccccc-cceEE-EEE--
Q 001730 246 GINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIK-PQFTVE----GTIWK-ACKLF-RLE-- 316 (1019)
Q Consensus 246 ~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~-~~~~~~----~~~~~-~~~~~-~~~-- 316 (1019)
+|.+.+++||+++|+++|||++++|.++.+++.......-..++...... +.+..| ..+.. ....+ .++
T Consensus 193 --lt~ekIR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~rPf~~tn~~~~i~e~t~~tVefp 270 (1022)
T KOG0961|consen 193 --LTLEKIRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPRPFSFTNALSDIKESTVHTVEFP 270 (1022)
T ss_pred --hhHHHHHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCCCcccccCcccCCccceeeeecC
Confidence 99999999999999999999999999999999988776544444322211 112100 01111 11111 121
Q ss_pred -eccccceEEEEEecCCCchhhhcChHHHHHHHhcCCCCCcHHHHHH--hcCccccccccccCCCCCCcccceEEEEEEE
Q 001730 317 -AVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLK--GRGWATSISAGVGDEGMHRSSIAYIFVMSIH 393 (1019)
Q Consensus 317 -~~~~~~~v~i~~~~~~~~~~~~~~~~~~l~~lLg~~~~~~L~~~Lr--~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~ 393 (1019)
.+..+..|.++|.+++..+-+...++.+|..+|....-..+.+.+. +..++.++++.....-+- .+.+.+.
T Consensus 271 ~~Des~G~v~~aW~g~s~sD~~t~~a~~vL~dyls~savapf~~~fVeieDP~assv~f~~~~~vrc------~i~L~f~ 344 (1022)
T KOG0961|consen 271 TDDESRGAVEVAWFGHSPSDLETHSALHVLFDYLSNSAVAPFQKDFVEIEDPLASSVSFHIAEGVRC------DIRLNFA 344 (1022)
T ss_pred CcccccceEEEEEcCCCHHHhhhHHHHHHHHHHhccccccccccceEEecCccccceeeeeecccce------eEEEeec
Confidence 2445789999999999887777789999999999755555555554 677888887776653321 4444443
Q ss_pred eChhhhhcHHHHHHHHHHHHHHHHHcCCchHHHHHHhhhcccceecccCC-ChHHHHHHHHHhccCCCcc--------cc
Q 001730 394 LTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQ-PQDDYAAELAGNLLIYPAE--------HV 464 (1019)
Q Consensus 394 ~~~~g~~~~~~v~~~i~~~l~~l~~~~~~~~~l~~~k~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~--------~~ 464 (1019)
.-| +++++.....+++.+. ....|+-+.......+-+.++....+. .+..+...+.....+.+.+ .-
T Consensus 345 gVP--~EKi~~~~~k~l~~l~--et~~iDm~Rm~~~i~~t~~~yL~nlE~n~~s~fms~ii~d~~ygnedg~~l~~~lk~ 420 (1022)
T KOG0961|consen 345 GVP--VEKIDECAPKFLDKLV--ETANIDMERMGYLIDQTILNYLVNLETNAPSDFMSHIIGDQLYGNEDGELLKKRLKE 420 (1022)
T ss_pred CCc--HHHhhhhhHHHHHHHH--HhcccCHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHhhhhhccCcchhHHHHHHHh
Confidence 333 2566666555555543 344576655554444444444433333 3445555555443332221 11
Q ss_pred ccccccccCCCHHHHHHHHhc-cCcCceEEEEEeCCCCCCCC---ccccceeccccccccCCh----hHHHhhcCCCCCC
Q 001730 465 IYGEYMYEVWDEEMIKHLLGF-FMPENMRIDVVSKSFAKSQD---FHYEPWFGSRYTEEDISP----SLMELWRNPPEID 536 (1019)
Q Consensus 465 l~~~~~i~~~t~e~i~~~~~~-l~~~~~~i~i~~p~~~~~~~---~~~e~~~~~~y~~~~i~~----~~l~~~~~~~~~~ 536 (1019)
+.....+.++...|+.+++++ +...+..+++.-|.+. ... .++++ ..+-.-+.+.+ +..+++.++.. .
T Consensus 421 l~~~~~L~~w~~kdW~~Llnk~Fven~s~tVia~Ps~e-m~e~i~kE~~~--~i~~r~~~lg~~gle~l~k~L~~ak~-~ 496 (1022)
T KOG0961|consen 421 LDFLKKLKSWPAKDWVQLLNKYFVENPSATVIAVPSEE-MVEKIAKEEEK--RIAARCEKLGKKGLEELGKSLEAAKL-E 496 (1022)
T ss_pred HHHHHHHhhccHHHHHHHHHHHhccCCCeEEEecCcHH-HHHHHHHHHHH--HHHHHHHHhChhhHHHHHHHHHHhhh-c
Confidence 233456778999999999999 5545556666678751 000 00000 00000011111 12222222110 0
Q ss_pred CCcCCCCCC--CC-C--CCCce------ecccCCCCCCCCCCCCeEeeccCCceEEEecCCCCCCCeEEEEEEEEcCCCC
Q 001730 537 VSLQLPSQN--EF-I--PTDFS------IRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGY 605 (1019)
Q Consensus 537 ~~~~lP~~n--~f-i--p~~~~------l~~~~~~~~~~~~~~P~~i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~ 605 (1019)
..-.+|..- .| | |+.++ +.....-.+--....|..-..-....++..-++ .|.-.|.+.|......
T Consensus 497 N~~~~p~~ll~~f~I~~peS~ef~~~~~v~t~~s~~pfdne~~~~~~T~~~~fp~fi~l~h---~ps~Fvel~fl~dss~ 573 (1022)
T KOG0961|consen 497 NTANHPSALLLDFLIVKPESLEFFDRFPVQTLTSNSPFDNELTPQQSTFLAQFPFFINLHH---CPSKFVELFFLLDSSN 573 (1022)
T ss_pred ccCCCCHHHHhheeccCchheeeeeccceeeccCCCCCCccccceeecccccCCceeeccc---CchHHHhHhhhhcccc
Confidence 000111100 00 0 11111 100000000000001111111111222222211 2344455555444433
Q ss_pred CCHHHHHHHHHHHHHHHHH---HHH------------HhHhh--hhcCcEEEEEEeC---ceeEEEEeecCCCHHHHHHH
Q 001730 606 DNVKNCILTELFIHLLKDE---LNE------------IIYQA--SVAKLETSVSIFS---DKLELKVYGFNDKLPVLLSK 665 (1019)
Q Consensus 606 ~~~~~~~l~~l~~~~l~~~---l~e------------~~~~~--~~~g~~~~~~~~~---~~~~l~~~g~s~~l~~~l~~ 665 (1019)
.+.....+..+|..++... +++ ..... .....+++.++.+ +-+.+.+..-.++++..+.+
T Consensus 574 i~~sl~pYl~~f~~l~~~~pa~ldgtiptp~~~s~~~v~~~~~s~~id~si~~g~~G~~~~lvn~~Ikv~a~~Y~~~v~W 653 (1022)
T KOG0961|consen 574 ISISLRPYLFLFTDLLFESPAMLDGTIPTPVLTSADDVAKHFTSDLIDHSIQVGVSGLYDRLVNLRIKVGADKYPLLVKW 653 (1022)
T ss_pred CchhhhhHHHHHHHHHhcCHHHhcCCCCcchhhhHHHHHHHHHhhhhhhhhcccccccchhheeEEEEEccCCcchhHHH
Confidence 3344455666666665442 111 11111 1122233333322 44888888889999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCC---CCC-----HHHHHHHh----ccC---CHH
Q 001730 666 ILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS---FYD-----VDEKLSIL----HGL---SLA 730 (1019)
Q Consensus 666 l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~~p~~~a~~~~~~ll~~~---~~~-----~~~~~~~l----~~i---t~~ 730 (1019)
+.-++....||++++....++++.+++.++.|.-..+.......+|.. .++ .+..++.| +.= -++
T Consensus 654 i~~~l~~~VfD~~Ri~~~~~~~l~~i~~~KRdg~~vlss~~~~~lY~~~slk~s~d~L~~Ek~l~ei~~~v~n~~~~Il~ 733 (1022)
T KOG0961|consen 654 IQIFLQGVVFDPSRIHQCAQKLLGEIRDRKRDGCTVLSSAVASMLYGKNSLKISFDELVLEKLLEEISKDVMNNPEAILE 733 (1022)
T ss_pred HHHHhhhhccCHHHHHHHHHHHHhhhhhhhcCccEehHHHHHHHHhcccchhhcccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999999999999999999999999998886555555555556532 111 12222222 111 123
Q ss_pred HHHHHHHHHHhhhceEEEEecCCCHH-HHHHHHHHHHhhhcCCCCCcccccc------ceeEECCCCC-eEEEEecccCC
Q 001730 731 DLMAFIPELRSQLYIEGLCHGNLSQE-EAIHISNIFKSIFSVQPLPIEMRHQ------ECVICLPSGA-NLVRNVSVKNK 802 (1019)
Q Consensus 731 dl~~~~~~~~~~~~~~~~i~Gni~~~-~a~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~ 802 (1019)
.+.+..+-.+..+.+.+.|+|||+.- +...-++........+ .|..+... ......-++. ..+ +..|
T Consensus 734 ~~e~mR~y~l~~n~~~ihvvgDI~kid~~~~~Wn~l~~~~~~~-nP~~~f~~tf~~~~~~s~e~gsssk~~~----I~~p 808 (1022)
T KOG0961|consen 734 KLEQMRSYALFSNGVNIHVVGDIDKIDPKMLSWNWLQADPRFG-NPGHQFSATFEAGENVSLELGSSSKELL----IGVP 808 (1022)
T ss_pred HHHHHHHHHHhhcceEEEEEeehhcCCccccCchhhhcCcccC-CchhhcccccccCcccceeccCCcceeE----ecCC
Confidence 33333332345568899999998863 3333343333332221 11111111 1112222222 222 2334
Q ss_pred CCccceeEEEEEEeccccCcccHHHHHHHHHHHHHh---chhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCC
Q 001730 803 CETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEIL---EEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYN 879 (1019)
Q Consensus 803 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~l---ss~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~v~s~~~~ 879 (1019)
....+-+. ...+.. .....+..+...|+++++ ..+|++.||-. ||+|+.........+..++.++-. .+
T Consensus 809 ~sESs~l~-~sip~~---~~w~dpel~~~~l~~~YL~~~eGPfW~~IRG~-GLAYGanm~~~~d~~~~~~~iyr~---ad 880 (1022)
T KOG0961|consen 809 GSESSFLY-QSIPLD---ANWNDPELIPAMLFGQYLSQCEGPFWRAIRGD-GLAYGANMFVKPDRKQITLSIYRC---AD 880 (1022)
T ss_pred Ccccccee-eecccc---cccCCcchhHHHHHHHHHHhcccchhhhhccc-chhccceeEEeccCCEEEEEeecC---Cc
Confidence 44444333 222221 334556777777888876 57999999986 899998888887777767666533 55
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHH-HHHhcCCCCCCchHHHHHHHhcCCH
Q 001730 880 PIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKD-PSLTYESNRFW-NQITDKRYMFDQSQKEAEDLKSIKK 957 (1019)
Q Consensus 880 ~~~~~~~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~~~~-~s~~~~~~~~~-~~i~~~~~~~~~~~~~~~~i~~vt~ 957 (1019)
+....++-..+++.+..--..+++.+|+.||.+.+..+.... ......+..+- ..+... +-+....+.++|.+||.
T Consensus 881 ~~kaye~~rdiV~~~vsG~~e~s~~~~egAk~s~~~~~~~~Eng~~~~a~~~~~l~~~~q~--~~~fn~~~leri~nvT~ 958 (1022)
T KOG0961|consen 881 PAKAYERTRDIVRKIVSGSGEISKAEFEGAKRSTVFEMMKRENGTVSGAAKISILNNFRQT--PHPFNIDLLERIWNVTS 958 (1022)
T ss_pred HHHHHHHHHHHHHHHhcCceeecHHHhccchHHHHHHHHHHhccceechHHHHHHHHHHhc--CCcccHHHHHHHHHhhH
Confidence 777788888888877653357999999999999998876533 33344444442 333333 34556688999999999
Q ss_pred HHHHHHHHHhcccC
Q 001730 958 NDVISWYKTYLQQW 971 (1019)
Q Consensus 958 edv~~~~~~~l~p~ 971 (1019)
+|+.+..+.|+.|-
T Consensus 959 ~~~~~~~~~y~~~~ 972 (1022)
T KOG0961|consen 959 EEMVKIGGPYLARL 972 (1022)
T ss_pred HHHHHhcccceehh
Confidence 99999999988654
No 11
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.9e-38 Score=319.50 Aligned_cols=397 Identities=14% Similarity=0.126 Sum_probs=333.8
Q ss_pred cccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhcccccccccceeEEE
Q 001730 23 LYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAA 102 (1019)
Q Consensus 23 ~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (1019)
..++-+|+|||+|..-..+.. -+++.
T Consensus 24 ~~kvttL~NGlkvase~~pg~------------------------------------------------------f~~vG 49 (472)
T KOG2067|consen 24 NTKVTTLPNGLKVASENTPGQ------------------------------------------------------FCTVG 49 (472)
T ss_pred cceeeecCCccEEeccCCCCC------------------------------------------------------ceEEE
Confidence 788899999999998777654 99999
Q ss_pred EEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHHHHhhc
Q 001730 103 MCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFF 182 (1019)
Q Consensus 103 l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~l~~~~ 182 (1019)
+++.+|+++|.....|++||+|.|+|..|.+++.. ++..-|+++||.+.+.+++|.+.|.+++.+++++.++.+|+|.+
T Consensus 50 lyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~-ei~~~LE~~GGn~~cqsSRetm~Yaas~~~~~v~sm~~lLadtV 128 (472)
T KOG2067|consen 50 LYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSK-EILAELEKLGGNCDCQSSRETMMYAASADSDGVDSMVELLADTV 128 (472)
T ss_pred EEEecCccccCcCcccHHHHHHHHhhccccCCcHH-HHHHHHHHhCCcccccccHhhhHHHHHhhhcccHHHHHHHHHHH
Confidence 99999999999999999999999999999999995 99999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcchhhhhcCccHHHHHHHHHHhccC
Q 001730 183 ISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQ 262 (1019)
Q Consensus 183 ~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~ 262 (1019)
.+|.|.+++++.++.++.-|+...-..|.-.+.+.++.++|.+.+.+.+..+..+.+.. ++.+.|.+|.+++|+
T Consensus 129 ~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl~cp~~~i~~------I~~~~l~~yl~~~yt 202 (472)
T KOG2067|consen 129 LNPKFTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPLLCPEENIDK------INREVLEEYLKYFYT 202 (472)
T ss_pred hcccccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCcccccccCChhhhhh------hhHHHHHHHHHhcCC
Confidence 99999999999999999999987777898889999999999999999988888888988 999999999999999
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCCCCccccccccccceEEEEE------e-ccccceEEEEEecCCCch
Q 001730 263 GGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLE------A-VKDVHILDLTWTLPCLHQ 335 (1019)
Q Consensus 263 p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~v~i~~~~~~~~~ 335 (1019)
|+||++..+| ++++++.+.++++|+++|+...|+... +...++++ ...++ + ...-.++.++|..++..+
T Consensus 203 p~rmVlA~vG-V~heelv~~~~~~~~~~~s~~~p~i~~--~~aQYtGG-~~~~~~d~~~~~~g~EltHv~lg~Eg~~~~d 278 (472)
T KOG2067|consen 203 PERMVLAGVG-VEHEELVEIAEKLLGDLPSTKVPPIDE--SKAQYTGG-ELKIDTDAPQVTGGPELTHVVLGFEGCSWND 278 (472)
T ss_pred hhheEeeecC-CCHHHHHHHHHHHhccCCccCCCCccc--chhhcccc-ccccCCCCccccCccceeeeeEeeccCCCCC
Confidence 9999999999 899999999999999999865443322 21223333 11111 1 124578999999998765
Q ss_pred hhhcChHHHHHHHhcCCCC-----------CcHHHHHH-hcCccccccccccCCCCCCcccceEEEEEEEeChhhhhcHH
Q 001730 336 EYLKKSEDYLAHLLGHEGR-----------GSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIF 403 (1019)
Q Consensus 336 ~~~~~~~~~l~~lLg~~~~-----------~~L~~~Lr-~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 403 (1019)
. +..++.+|+.+||||++ +|||-.+- +..|+|+..++... | ++.|+|.|++.+.| +.+.
T Consensus 279 e-D~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhs----y-~DtGlfgi~~s~~P---~~a~ 349 (472)
T KOG2067|consen 279 E-DFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHS----Y-SDTGLFGIYASAPP---QAAN 349 (472)
T ss_pred h-hHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhcc----c-cCCceeEEeccCCH---HHHH
Confidence 5 77899999999998654 45776555 77899988775443 2 35679999999999 8899
Q ss_pred HHHHHHHHHHHHHHHcCCchHHHHHHhhhcccceecccCCChHHHHHHHHHhccCC----CccccccccccccCCCHHHH
Q 001730 404 DIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIY----PAEHVIYGEYMYEVWDEEMI 479 (1019)
Q Consensus 404 ~v~~~i~~~l~~l~~~~~~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~l~~~~~i~~~t~e~i 479 (1019)
+++..+-+++..+. .+++++|+++||.+++..+.++.++.+ -..+.++.+.+.+ +|++++ ..|+++|++||
T Consensus 350 ~aveli~~e~~~~~-~~v~~~el~RAK~qlkS~LlMNLESR~-V~~EDvGRQVL~~g~rk~p~e~~---~~Ie~lt~~DI 424 (472)
T KOG2067|consen 350 DAVELIAKEMINMA-GGVTQEELERAKTQLKSMLLMNLESRP-VAFEDVGRQVLTTGERKPPDEFI---KKIEQLTPSDI 424 (472)
T ss_pred HHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHhcccccc-hhHHHHhHHHHhccCcCCHHHHH---HHHHhcCHHHH
Confidence 99999999998875 569999999999999998888777544 3556677665433 334444 45899999999
Q ss_pred HHHHhccCcCceEEEEEeC
Q 001730 480 KHLLGFFMPENMRIDVVSK 498 (1019)
Q Consensus 480 ~~~~~~l~~~~~~i~i~~p 498 (1019)
.++++++...++.+.-.|.
T Consensus 425 ~rva~kvlt~~p~va~~Gd 443 (472)
T KOG2067|consen 425 SRVASKVLTGKPSVAAFGD 443 (472)
T ss_pred HHHHHHHhcCCceeccCCc
Confidence 9999997777877765554
No 12
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=9.5e-31 Score=301.08 Aligned_cols=407 Identities=14% Similarity=0.075 Sum_probs=318.4
Q ss_pred eEeeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHH-----HHhHhhhhcCcEEEEEEe
Q 001730 570 TCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN-----EIIYQASVAKLETSVSIF 644 (1019)
Q Consensus 570 ~~i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~-----e~~~~~~~~g~~~~~~~~ 644 (1019)
......+|++++..+.++ .|.+.+.+.+..+....+....+++.++..++..... ++.......|...+...+
T Consensus 18 ~~~~L~nGl~~~~~~~~~--~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~i~~~~~~~G~~~na~ts 95 (438)
T COG0612 18 QVFTLPNGLRVITYPNPT--APTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAELAEAFEKLGGQLNAFTS 95 (438)
T ss_pred eEEEcCCCCEEEEEeCCC--CCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHHHHHHHHHhcCeeecccc
Confidence 456778999999999876 6789999999877777888888899999998876532 344555667888888888
Q ss_pred CceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCC---CCCHHHHH
Q 001730 645 SDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS---FYDVDEKL 721 (1019)
Q Consensus 645 ~~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~~p~~~a~~~~~~ll~~~---~~~~~~~~ 721 (1019)
.+.....++.++++++.+++++++++.+|.|++++|+++|..++++++...++|..++...+...+++. .++..|+.
T Consensus 96 ~d~t~y~~~~l~~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~ 175 (438)
T COG0612 96 FDYTVYYLSVLPDNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTE 175 (438)
T ss_pred chhhhhhhhhchhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCH
Confidence 888888888788999999999999999999999999999999999999999999999999999988753 34568899
Q ss_pred HHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEECCCCCeEEEEeccc-
Q 001730 722 SILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVK- 800 (1019)
Q Consensus 722 ~~l~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 800 (1019)
+.|+++|.+||++||++||+|.|++++|+||++.+++..++++.++.|+....+. ..+..+ .. .+.... .....
T Consensus 176 e~I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~~~~~-~~~~~~--~~-~~~~~~-~~~~~~ 250 (438)
T COG0612 176 ESIEAITREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGAAPPP-KIPPEP--PL-GPERVV-RVNDPE 250 (438)
T ss_pred HHHHhCCHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCccCCCC-CCCCcc--cc-CCCceE-EecCCC
Confidence 9999999999999999999999999999999999999999999999998621111 111100 01 111111 11111
Q ss_pred CCCCccceeEEEEEEeccccCc-ccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCC
Q 001730 801 NKCETNSVIEVLYFQIEQEKGM-ELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYN 879 (1019)
Q Consensus 801 ~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~ll~~~lss~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~v~s~~~~ 879 (1019)
.+......+. ..++..+.... +.....+++.++++.++||||+++|+++||+|++++........+.+.+++.+...+
T Consensus 251 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (438)
T COG0612 251 QPDLEQAWLA-LGYPGPDYDSPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFLSDSGLFSIYAGTAPEN 329 (438)
T ss_pred Cchhhhhhhh-ccccCcCcCcchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeeccccccccccCCceEEEEecCCC
Confidence 1222233333 33333100000 124455556666667789999999999999999998776666655666666666678
Q ss_pred hhHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHhcCCHH
Q 001730 880 PIYLQERIDNFISGLDELL-EGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKN 958 (1019)
Q Consensus 880 ~~~~~~~i~~~l~~~~~~~-~~ise~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~vt~e 958 (1019)
++.+.+.+.+.+..+...+ +.+++++++.+|..+.+.+....+++...++.++.....+. .....+++++.|++||++
T Consensus 330 ~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~vt~~ 408 (438)
T COG0612 330 PEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLDSPSSIAELLGQYLLLGG-SLITLEELLERIEAVTLE 408 (438)
T ss_pred hhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHhcC-CccCHHHHHHHHHhcCHH
Confidence 8888889999888887643 24899999999999999999999999999999987776543 578899999999999999
Q ss_pred HHHHHHHHhcccCCCCccEEEEEEecCCCCcc
Q 001730 959 DVISWYKTYLQQWSPKCRRLAVRVWGCNTNIK 990 (1019)
Q Consensus 959 dv~~~~~~~l~p~~~~~~~~~v~v~G~~~~~~ 990 (1019)
||++++++++.+. ..+++++|+.....
T Consensus 409 dv~~~a~~~~~~~-----~~~~~~~~p~~~~~ 435 (438)
T COG0612 409 DVNAVAKKLLAPE-----NLTIVVLGPEKALK 435 (438)
T ss_pred HHHHHHHHhcCCC-----CcEEEEEccccccc
Confidence 9999999999765 58999999876544
No 13
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.93 E-value=1.8e-23 Score=214.14 Aligned_cols=391 Identities=14% Similarity=0.111 Sum_probs=287.1
Q ss_pred ccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhcccccccccceeEEEE
Q 001730 24 YRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAAM 103 (1019)
Q Consensus 24 ~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 103 (1019)
-..-+|.|||+|.-+..+.. .+.+.+
T Consensus 23 ~~~~kl~ngL~Vas~e~~~~------------------------------------------------------is~l~l 48 (429)
T KOG2583|consen 23 SKTTKLVNGLTVASREAPTA------------------------------------------------------ISSLSL 48 (429)
T ss_pred hhhhccccceEEEeccCCCc------------------------------------------------------ceEEEE
Confidence 44568999999999998875 999999
Q ss_pred EeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHHHHhhcc
Q 001730 104 CVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFI 183 (1019)
Q Consensus 104 ~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~l~~~~~ 183 (1019)
.|++||+++|.+++|++|+++...++-++.++. ..+.+-++..||.++.++++|+..|.++++.++++-.|.+|.+.+.
T Consensus 49 ~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sa-l~ivr~se~~GG~Lss~~tRe~~~~tvt~lrd~~~~~l~~L~~V~~ 127 (429)
T KOG2583|consen 49 AFRAGSRYEPADQQGLSHLLRNFVGRDTQERSA-LKIVRESEQLGGTLSSTATRELIGLTVTFLRDDLEYYLSLLGDVLD 127 (429)
T ss_pred EEecCccCCccccccHHHHHHHhcccCccccch-hhhhhhhHhhCceeeeeeecceEEEEEEEecccHHHHHHHHHHhhc
Confidence 999999999999999999999999999999998 7999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHH-HHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcchhhhhcCccHHHHHHHHHHhccC
Q 001730 184 SPLMKVEAMEREV-LAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQ 262 (1019)
Q Consensus 184 ~P~~~~~~~~~e~-~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~ 262 (1019)
.|.|.+.+++.+. ..+..+.. ..+|..+..+.+++.+|.+ .++...+-..-.+.+ ++.++|.+|-+++|.
T Consensus 128 ~paFkPwEl~D~~~~ti~~~l~--~~t~~~~a~e~lH~aAfRn-gLgnslY~p~~~vg~------vss~eL~~Fa~k~fv 198 (429)
T KOG2583|consen 128 APAFKPWELEDVVLATIDADLA--YQTPYTIAIEQLHAAAFRN-GLGNSLYSPGYQVGS------VSSSELKDFAAKHFV 198 (429)
T ss_pred ccCcCchhhhhhhhhhhHHHhh--hcChHHHHHHHHHHHHHhc-ccCCcccCCcccccC------ccHHHHHHHHHHHhh
Confidence 9999999999998 67766665 4789999999999998865 555554433334555 889999999999999
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCCCCccccccccccceEEEEEeccccceEEEEEecCC--CchhhhcC
Q 001730 263 GGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPC--LHQEYLKK 340 (1019)
Q Consensus 263 p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~--~~~~~~~~ 340 (1019)
.+||+++-+| +|++.+..+.++++ .++......+. + ..+.++.. .... ......+.+...+ ..+.+...
T Consensus 199 ~gn~~lvg~n-vd~~~L~~~~~~~~-~~~~~~~~k~a---~-a~~~gGe~-Rk~~--~g~~~~v~vagegAAa~~~k~~~ 269 (429)
T KOG2583|consen 199 KGNAVLVGVN-VDHDDLKQFADEYA-PIRDGLPLKPA---P-AKYSGGEA-RKDA--RGNRVHVAVAGEGAAAGNLKVLA 269 (429)
T ss_pred ccceEEEecC-CChHHHHHHHHHhc-cccCCCCCCCC---C-ccccCCcc-cccc--CCceeEEEEecCcccccchHHHH
Confidence 9999999999 89999999999983 33322211111 0 12222222 1111 2233344444443 22344556
Q ss_pred hHHHHHHHhcCCCC----CcHHHHHHhcCccccccccccCCCCCCcccceEEEEEEEeChhhhhcHHHHHHHHHHHHHHH
Q 001730 341 SEDYLAHLLGHEGR----GSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLL 416 (1019)
Q Consensus 341 ~~~~l~~lLg~~~~----~~L~~~Lr~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~v~~~i~~~l~~l 416 (1019)
+..++.+.||...+ .+++..+-..-.-+++++..... .| ++.|+|+|++..+. .++.++++.....++..
T Consensus 270 a~av~~~~Lg~~~~~k~~t~~~~~aa~~a~~~~~s~sA~~a--~y-sDsGL~gv~~~~~~---~~a~~~v~s~v~~lks~ 343 (429)
T KOG2583|consen 270 AQAVLLAALGNSAPVKRGTGLLSEAAGAAGEQGASASAFNA--PY-SDSGLFGVYVSAQG---SQAGKVVSSEVKKLKSA 343 (429)
T ss_pred HHHHHHHHHhcccccccccchHHHHHhhccccCceeeeecc--cc-cCCceEEEEEEecC---ccHHHHHHHHHHHHHHH
Confidence 77889999998664 45665555222223333322221 12 35679999998876 68899999988888888
Q ss_pred HHcCCchHHHHHHhhhcccceecccCCChHHHHHHHHHhccCCCccccccccccccCCCHHHHHHHHhccCcCceEEEEE
Q 001730 417 RQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVV 496 (1019)
Q Consensus 417 ~~~~~~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~e~i~~~~~~l~~~~~~i~i~ 496 (1019)
...+++-.....+.+.++....... ...........++ ..+++.++. .|+++++.||++.++++...++.+.-+
T Consensus 344 ~~~~id~~~~~a~~~~l~~~~~ss~--~a~~~~~~~~a~~-~~~~d~~i~---~id~Vt~sdV~~a~kk~~s~kls~aA~ 417 (429)
T KOG2583|consen 344 LVSDIDNAKVKAAIKALKASYLSSV--EALELATGSQANL-VSEPDAFIQ---QIDKVTASDVQKAAKKFLSGKLSLAAY 417 (429)
T ss_pred HhcCCcchHHHHHHHHHHHHhhcch--HHHHHhhHHHhcC-CCChHHHHH---HhccccHHHHHHHHHHhccCcceeeee
Confidence 8888887776776666555433221 1111111222111 124555554 489999999999999998888888887
Q ss_pred eCC
Q 001730 497 SKS 499 (1019)
Q Consensus 497 ~p~ 499 (1019)
|.-
T Consensus 418 Gnl 420 (429)
T KOG2583|consen 418 GNL 420 (429)
T ss_pred ccc
Confidence 764
No 14
>PRK15101 protease3; Provisional
Probab=99.93 E-value=3.9e-24 Score=271.13 Aligned_cols=395 Identities=10% Similarity=0.003 Sum_probs=285.2
Q ss_pred cccEEEecCCCEEEEEeCC---CCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhccccccccccee
Q 001730 23 LYRVIELENRLCALLVHDP---EIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKA 99 (1019)
Q Consensus 23 ~~~~~~L~Ngl~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (1019)
....+.++||++|++++|+ .. | ++
T Consensus 522 ~p~~i~~~~g~~vw~~~d~~f~~~--------------P---------------------------------------k~ 548 (961)
T PRK15101 522 HPELIVDEPGLRVVYMPSQYFADE--------------P---------------------------------------KA 548 (961)
T ss_pred CCeEEEcCCCeEEEEeCCCccccC--------------C---------------------------------------CE
Confidence 3577899999999999998 45 6 99
Q ss_pred EEEEEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHHHH
Q 001730 100 AAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFS 179 (1019)
Q Consensus 100 ~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~l~ 179 (1019)
.+.+.+.+|...++....|++.++..|+.. . ..++....+..|.+++.. +.+.+.+++++.+++++.+|+++.
T Consensus 549 ~i~~~~~~~~~~~~~~~~~l~~L~~~ll~~-----~-l~e~~y~a~~aG~~~~~~-~~~g~~i~v~g~s~~l~~ll~~l~ 621 (961)
T PRK15101 549 DISLVLRNPKAMDSARNQVLFALNDYLAGL-----A-LDQLSNQASVGGISFSTN-ANNGLMVNANGYTQRLPQLLQALL 621 (961)
T ss_pred EEEEEEeCCCccCCHHHHHHHHHHHHHHHH-----H-HHHHhchHHhcCcEEEEc-cCCCEEEEEEecChhHHHHHHHHH
Confidence 999999999999988999999999988721 1 124444455678889888 689999999999999999999999
Q ss_pred hhccCCCCChhHHHHHHHHHHHHHHhhcCCHHHHHHHHHHh-cCCCCCCCCcCCcCchhcchhhhhcCccHHHHHHHHHH
Q 001730 180 QFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCH-TSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYM 258 (1019)
Q Consensus 180 ~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~ 258 (1019)
+.+.+|.|++++|+++|..+.+++++...+ ..+.+.+.. ..+.+|||+.. .|..++|.. +|.++|++||+
T Consensus 622 d~l~~~~~~~~~fe~~k~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~py~~~-~~~~~~l~~------it~edl~~f~~ 692 (961)
T PRK15101 622 EGYFSFTPTEEQLAQAKSWYREQLDSAEKG--KAYEQAIMPAQMLSQVPYFER-DERRKLLPS------ITLKDVLAYRD 692 (961)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHhhhccc--CcHHHHHHHHHHHhcCCCCCH-HHHHHHHhc------CCHHHHHHHHH
Confidence 999999999999999999999999865432 223333322 24578999864 578889988 99999999999
Q ss_pred hccCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCCCCccccccccccceE-EEEEeccccceEEEEEecCCCchhh
Q 001730 259 NYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKL-FRLEAVKDVHILDLTWTLPCLHQEY 337 (1019)
Q Consensus 259 ~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~~~~~~~~~~~ 337 (1019)
++|+|.|++++|+||++.+++.++++++++.++.......... .......... +...+...+..+.+.|..++..
T Consensus 693 ~~~~~~~~~~~v~GNi~~~ea~~l~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--- 768 (961)
T PRK15101 693 ALLSGATPEFLVVGNLTEEQVTTLARDVQKQLGADGTEWWRGK-DVVVDKKQSVNFEKAGSSTDSALAAVYVPTGYD--- 768 (961)
T ss_pred HHHHhceEEEEEEcCCCHHHHHHHHHHHHHHhccCCccccccc-ceEeCCCCeEEEecCCCCCCCeEEEEEEeCCCC---
Confidence 9999999999999999999999999999888865322110000 0000011112 2212223345555666443332
Q ss_pred hcChHHHHHHHhcCCCCCcHHHHHH-hcCccccccccccCCCCCCcccceEEEEEEEeChhhhhcHHHHHHHHHHHHHHH
Q 001730 338 LKKSEDYLAHLLGHEGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLL 416 (1019)
Q Consensus 338 ~~~~~~~l~~lLg~~~~~~L~~~Lr-~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~v~~~i~~~l~~l 416 (1019)
..+..+++.+||++..++|+..|| ++||+|.++++..... + .+.+.+.++....+.+.++..++.+...+...
T Consensus 769 -~~~~~v~~~lLg~~~ssrlf~~LRtk~qLgY~V~s~~~~~~-~----~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~ 842 (961)
T PRK15101 769 -EYQSSAYSSLLGQIIQPWFYNQLRTEEQLGYAVFAFPMSVG-R----QWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAK 842 (961)
T ss_pred -CHHHHHHHHHHHHHHhHHHHHHHHHHhhhceEEEEEeeccC-C----eeeEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 245688999999988899999999 8999999998765431 1 22445555444323344555555555554322
Q ss_pred HHcCCchHHHHHHhhhcccceecccCCChHHHHHHHHHhcc--CCCccccccccccccCCCHHHHHHHHhc--cCcCceE
Q 001730 417 RQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLL--IYPAEHVIYGEYMYEVWDEEMIKHLLGF--FMPENMR 492 (1019)
Q Consensus 417 ~~~~~~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~l~~~~~i~~~t~e~i~~~~~~--l~~~~~~ 492 (1019)
. .++++++|+++|+.+..++....+ +..+.+..+...+. .++.+........++++|+++|.+++++ +.+++.+
T Consensus 843 l-~~lt~eE~~~~k~~l~~~~~~~~~-sl~~~a~~~~~~i~~~~~~fd~~~~~~~~i~~vT~edv~~~~~~~~~~~~~~~ 920 (961)
T PRK15101 843 L-RAMKPEEFAQYQQALINQLLQAPQ-TLGEEASRLSKDFDRGNMRFDSRDKIIAQIKLLTPQKLADFFHQAVIEPQGLA 920 (961)
T ss_pred H-HhCCHHHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHHhcCCCCcChHHHHHHHHHcCCHHHHHHHHHHHhcCCCCCE
Confidence 2 489999999999999998877665 45556666655543 3344444455667899999999999988 3566655
Q ss_pred E-EEEeC
Q 001730 493 I-DVVSK 498 (1019)
Q Consensus 493 i-~i~~p 498 (1019)
+ +.+.+
T Consensus 921 ~~~~~~~ 927 (961)
T PRK15101 921 ILSQISG 927 (961)
T ss_pred EEEEeec
Confidence 5 34444
No 15
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=99.91 E-value=5.1e-22 Score=231.30 Aligned_cols=330 Identities=11% Similarity=-0.023 Sum_probs=245.7
Q ss_pred eeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHH------HHhHhhhhcCcEEEEEEeC
Q 001730 572 IIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN------EIIYQASVAKLETSVSIFS 645 (1019)
Q Consensus 572 i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~------e~~~~~~~~g~~~~~~~~~ 645 (1019)
+...||++|++.+++. .|.+.+.+.+..+...++....+++.++..++..... ++.......|.+++.+.+.
T Consensus 3 ~tL~NGLrVllv~~p~--~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~ 80 (696)
T TIGR02110 3 ITLPNGLRVHLYHQPD--AKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLE 80 (696)
T ss_pred EEcCCCCEEEEEECCC--CCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcC
Confidence 4568999999999775 5789999999888877777788999999999876532 2344445678899999999
Q ss_pred ceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcC-CCC--CHHHHHH
Q 001730 646 DKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQ-SFY--DVDEKLS 722 (1019)
Q Consensus 646 ~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~~p~~~a~~~~~~ll~~-~~~--~~~~~~~ 722 (1019)
+...++++..+++++.+++++.+++.+|.|++++|+++|+++++++++..++|...+.+.+...++. ++| ...|+.+
T Consensus 81 d~T~y~~~v~~~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~e 160 (696)
T TIGR02110 81 RTTAFFFELPAAALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRD 160 (696)
T ss_pred CeEEEEEEecHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999999999999999999888999999888888874 333 3567888
Q ss_pred HhccCC---HHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEECCCCCeEEEEecc
Q 001730 723 ILHGLS---LADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSV 799 (1019)
Q Consensus 723 ~l~~it---~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1019)
+|+.++ .+++++||+++|.++|++++|+||++.++++++++++++.|+....+....+. .........+. .
T Consensus 161 sL~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~~~~~----p~~~~~~~~~~--~ 234 (696)
T TIGR02110 161 SLALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECAQAPPA----PLLRFDRLTLA--G 234 (696)
T ss_pred HHhCcccchHHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCCCCCC----CCCCCceeEEE--e
Confidence 888765 99999999999999999999999999999999999999988765332111110 00011111111 1
Q ss_pred cCCCCccceeEEEEEEeccccCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeee-CCeeeEEEEEeC---
Q 001730 800 KNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVT-YRVFGFCFCIQS--- 875 (1019)
Q Consensus 800 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~lss~lf~~LRek~~L~Y~v~s~~~~~-~~~~~~~~~v~s--- 875 (1019)
....+..+. +.+.. .. ..+.....++..+|++.++|+||.+||+ +||+|+|++++... .+.+.|.+++..
T Consensus 235 --~~~~q~~l~-~~~p~-~~-~~d~~al~lL~~iLg~g~sSrL~~~LRe-~GLaysV~s~~~~~~~g~~lf~I~~~lt~~ 308 (696)
T TIGR02110 235 --GSEPRLWLL-FALAG-LP-ATARDNVTLLCEFLQDEAPGGLLAQLRE-RGLAESVAATWLYQDAGQALLALEFSARCI 308 (696)
T ss_pred --cCcceEEEE-EeecC-CC-CCChHHHHHHHHHhCCCcchHHHHHHHH-CCCEEEEEEeccccCCCCcEEEEEEEEcCC
Confidence 112233333 22222 11 1223334566677777788999999996 89999999966322 233356666654
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q 001730 876 SKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMA 915 (1019)
Q Consensus 876 ~~~~~~~~~~~i~~~l~~~~~~~~~ise~el~~~k~~l~~ 915 (1019)
+..+.+++.+.|.++++.+.+..-+++.+|+.++|+.=..
T Consensus 309 ~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~~~~ 348 (696)
T TIGR02110 309 SAAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQRRFQ 348 (696)
T ss_pred CccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhh
Confidence 2346777777887887777652227899999999987443
No 16
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=4.6e-21 Score=195.57 Aligned_cols=404 Identities=10% Similarity=0.048 Sum_probs=301.1
Q ss_pred eeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHH-----HhHhhhhcCcEEEEEEeCc
Q 001730 572 IIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE-----IIYQASVAKLETSVSIFSD 646 (1019)
Q Consensus 572 i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~e-----~~~~~~~~g~~~~~~~~~~ 646 (1019)
....+|.+|---.+ ..+.++|.+-|..+.-..+.++.+.+.++-.+....... .-.+.+--|..++...+++
T Consensus 37 ttL~NGlrVaTE~~---~a~TATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEieniGahLNAytSRe 113 (467)
T KOG0960|consen 37 TTLPNGLRVATEHN---SASTATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEIENIGAHLNAYTSRE 113 (467)
T ss_pred EEcCCCcEEEeccC---CCcceEEEEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHhccccccc
Confidence 45678888865553 356789999999988889999999999888866554322 1122334677888888889
Q ss_pred eeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCC---CCCHHHHHHH
Q 001730 647 KLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS---FYDVDEKLSI 723 (1019)
Q Consensus 647 ~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~~p~~~a~~~~~~ll~~~---~~~~~~~~~~ 723 (1019)
.....+++++++++++++.+.|++++..+.+..++++|..++++.+....+--...++.+....|.+ ..+..|..+.
T Consensus 114 qT~yyakal~~dv~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~en 193 (467)
T KOG0960|consen 114 QTVYYAKALSKDVPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPSEN 193 (467)
T ss_pred ceeeehhhccccchHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChhhh
Confidence 9999999999999999999999999999999999999999999999887775556677777777644 4567889999
Q ss_pred hccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEECCCCCeEEEEecccCCC
Q 001730 724 LHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKC 803 (1019)
Q Consensus 724 l~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 803 (1019)
|++|+.+||++|.+.+|.+.++++..+|.++.++..++++++++.++..+.+... +....... .+..+. ..++.
T Consensus 194 I~si~r~DL~~yi~thY~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~~~~~~~-~~~~~~~F-tgsEvR----~rdd~ 267 (467)
T KOG0960|consen 194 IKSISRADLKDYINTHYKASRMVLAAAGGVKHEELVKLAEKYFGDLSKLQTGDKV-PLVPPARF-TGSEVR----VRDDD 267 (467)
T ss_pred hhhhhHHHHHHHHHhcccCccEEEEecCCcCHHHHHHHHHHHcCCCcccccCcCC-CCCCCccc-cCceee----ecCCC
Confidence 9999999999999999999999999999999999999999999997653322100 00000000 122222 22333
Q ss_pred CccceeEEEEEEe-ccccCcccHHHHHHHHHHHHH---------hchhhhHHhhhccccceEEEeeeeeeCCeeeEEEEE
Q 001730 804 ETNSVIEVLYFQI-EQEKGMELTRLKALIDLFDEI---------LEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCI 873 (1019)
Q Consensus 804 ~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~ll~~~---------lss~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~v 873 (1019)
-+...+. +..-. ++. .+++....++.+++|.+ .+|+|-+.+-.. +|+-+.-++.-.+.+.|-+.+|+
T Consensus 268 lP~a~~A-iAVEG~~w~-~pD~~~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~-~l~~sfqsFnt~YkDTGLwG~y~ 344 (467)
T KOG0960|consen 268 LPLAHIA-IAVEGVSWA-HPDYFALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQD-QLCHSFQSFNTSYKDTGLWGIYF 344 (467)
T ss_pred Cchhhee-eeEecCCcC-CccHHHHHHHHHHhhhhhcccCCccCCccHHHHHHHHH-HHHHHHhhhhcccccccceeEEE
Confidence 3444444 33322 111 44556666677777765 367888888776 77877766666666666666666
Q ss_pred eCCCCChhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHh
Q 001730 874 QSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLK 953 (1019)
Q Consensus 874 ~s~~~~~~~~~~~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~ 953 (1019)
.+. ++..+...+..++.+..++-..+|+.|.++||+.|..++....++...+++.+..+++..+. --.+.+.-++|+
T Consensus 345 V~~--~~~~iddl~~~vl~eW~rL~~~vteaEV~RAKn~Lkt~Lll~ldgttpi~ediGrqlL~~Gr-ri~l~El~~rId 421 (467)
T KOG0960|consen 345 VTD--NLTMIDDLIHSVLKEWMRLATSVTEAEVERAKNQLKTNLLLSLDGTTPIAEDIGRQLLTYGR-RIPLAELEARID 421 (467)
T ss_pred Eec--ChhhHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHhhcCC-cCChHHHHHHHh
Confidence 552 45556666666666655544589999999999999999999888888889999898887663 335567788999
Q ss_pred cCCHHHHHHHHHHhcccCCCCccEEEEEEecCCCCcchhhcc
Q 001730 954 SIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKH 995 (1019)
Q Consensus 954 ~vt~edv~~~~~~~l~p~~~~~~~~~v~v~G~~~~~~~~~~~ 995 (1019)
+||.++|++++.+|+- -+.+.+..+|+-....++..+
T Consensus 422 ~vt~~~Vr~va~k~iy-----d~~iAia~vG~ie~lpdy~~i 458 (467)
T KOG0960|consen 422 AVTAKDVREVASKYIY-----DKDIAIAAVGPIEGLPDYNRI 458 (467)
T ss_pred hccHHHHHHHHHHHhh-----cCCcceeeecccccCchHHHH
Confidence 9999999999999993 358999999998777776654
No 17
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.88 E-value=3.9e-22 Score=192.97 Aligned_cols=137 Identities=27% Similarity=0.380 Sum_probs=131.8
Q ss_pred eeEEEEEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHH
Q 001730 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMR 177 (1019)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~ 177 (1019)
.+++++++++|+.+||.+.+|+||+++||+++||.+++. .++.+.++.+|+.+++.|+.++|.|.+++++++++.+|++
T Consensus 12 ~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~-~~l~~~l~~~G~~~~~~t~~d~t~~~~~~~~~~~~~~l~~ 90 (149)
T PF00675_consen 12 VVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSS-DELQEELESLGASFNASTSRDSTSYSASVLSEDLEKALEL 90 (149)
T ss_dssp EEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBH-HHHHHHHHHTTCEEEEEEESSEEEEEEEEEGGGHHHHHHH
T ss_pred EEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhh-hhhHHHhhhhccccceEecccceEEEEEEecccchhHHHH
Confidence 999999999999999999999999999999999999998 7999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCChhHHHHHHHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCc
Q 001730 178 FSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGN 235 (1019)
Q Consensus 178 l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~ 235 (1019)
+++++.+|.|++++|+++|..+..|++....+|...+.+.+++.+|.+|||+++..|+
T Consensus 91 l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~~~~~~~ 148 (149)
T PF00675_consen 91 LADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHPYGNPLLGP 148 (149)
T ss_dssp HHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGGSHSS-T
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCCCCCCCC
Confidence 9999999999999999999999999999989998999999999999999999998875
No 18
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=1.2e-19 Score=185.49 Aligned_cols=401 Identities=9% Similarity=0.029 Sum_probs=303.7
Q ss_pred eeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHH-----HHHhHhhhhcCcEEEEEEeCc
Q 001730 572 IIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDEL-----NEIIYQASVAKLETSVSIFSD 646 (1019)
Q Consensus 572 i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l-----~e~~~~~~~~g~~~~~~~~~~ 646 (1019)
....||++|--.+. ++ +-..+.+.+.++..+....-.+...++-.+--.+. .+.....+..|-.++.+.+++
T Consensus 28 ttL~NGlkvase~~--pg-~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~LE~~GGn~~cqsSRe 104 (472)
T KOG2067|consen 28 TTLPNGLKVASENT--PG-QFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAELEKLGGNCDCQSSRE 104 (472)
T ss_pred eecCCccEEeccCC--CC-CceEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHHHHhCCcccccccHh
Confidence 35678998866543 32 35778888888887777666666666655433321 245555677888999999999
Q ss_pred eeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCC---CCCHHHHHHH
Q 001730 647 KLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS---FYDVDEKLSI 723 (1019)
Q Consensus 647 ~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~~p~~~a~~~~~~ll~~~---~~~~~~~~~~ 723 (1019)
...-.++.+++.++.++.+++|.+..|.|++++++.+|..+.-++...-.+|..+..+++....|.. ..+.....+.
T Consensus 105 tm~Yaas~~~~~v~sm~~lLadtV~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl~cp~~~ 184 (472)
T KOG2067|consen 105 TMMYAASADSDGVDSMVELLADTVLNPKFTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPLLCPEEN 184 (472)
T ss_pred hhHHHHHhhhcccHHHHHHHHHHHhcccccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCcccccccCChhh
Confidence 9999999999999999999999999999999999999998888887777779777778887777654 3333445688
Q ss_pred hccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEECCCCCeEEEEeccc--C
Q 001730 724 LHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVK--N 801 (1019)
Q Consensus 724 l~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 801 (1019)
+..|+.+.|..|.+.+|.|.++++..+| ++.+++.+++++++..++....|....+..+.. |....+..+.. .
T Consensus 185 i~~I~~~~l~~yl~~~ytp~rmVlA~vG-V~heelv~~~~~~~~~~~s~~~p~i~~~~aQYt----GG~~~~~~d~~~~~ 259 (472)
T KOG2067|consen 185 IDKINREVLEEYLKYFYTPERMVLAGVG-VEHEELVEIAEKLLGDLPSTKVPPIDESKAQYT----GGELKIDTDAPQVT 259 (472)
T ss_pred hhhhhHHHHHHHHHhcCChhheEeeecC-CCHHHHHHHHHHHhccCCccCCCCcccchhhcc----ccccccCCCCcccc
Confidence 9999999999999999999999999888 899999999999999998854332111111100 11000000000 0
Q ss_pred CCCccceeEEEEEEeccccCcccHHHHHHHHHHHHH---------------hchhhhHHhhhccccceEEEeeeeeeCCe
Q 001730 802 KCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEI---------------LEEPFFNQLRTKEQLGYVVECSPRVTYRV 866 (1019)
Q Consensus 802 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~---------------lss~lf~~LRek~~L~Y~v~s~~~~~~~~ 866 (1019)
-...-..++ +.+-. .....++.+++.+|..+ |.||||.++=.+.++.|++-|+.+++.+.
T Consensus 260 ~g~EltHv~-lg~Eg----~~~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy~Dt 334 (472)
T KOG2067|consen 260 GGPELTHVV-LGFEG----CSWNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSYSDT 334 (472)
T ss_pred Cccceeeee-Eeecc----CCCCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhccccCC
Confidence 010122233 34433 44555566666666554 45799999999999999999999999988
Q ss_pred eeEEEEEeCCCCChhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCchH
Q 001730 867 FGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQ 946 (1019)
Q Consensus 867 ~~~~~~v~s~~~~~~~~~~~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~ 946 (1019)
+-|.++..+. |+.+.+.++-+.+++..+..+++++|+++||.++.+.+..+.+|---.+.-..++++..+ .-..++
T Consensus 335 Glfgi~~s~~---P~~a~~aveli~~e~~~~~~~v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL~~g-~rk~p~ 410 (472)
T KOG2067|consen 335 GLFGIYASAP---PQAANDAVELIAKEMINMAGGVTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQVLTTG-ERKPPD 410 (472)
T ss_pred ceeEEeccCC---HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHHHhcc-CcCCHH
Confidence 8887776655 888999999999998887778999999999999999999888776666777888888776 456889
Q ss_pred HHHHHHhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCCCcchhhcc
Q 001730 947 KEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKH 995 (1019)
Q Consensus 947 ~~~~~i~~vt~edv~~~~~~~l~p~~~~~~~~~v~v~G~~~~~~~~~~~ 995 (1019)
++++.|+++|++||.+++.+.|. .+.++.-.|+....+.+..+
T Consensus 411 e~~~~Ie~lt~~DI~rva~kvlt------~~p~va~~Gd~~~lpt~~~i 453 (472)
T KOG2067|consen 411 EFIKKIEQLTPSDISRVASKVLT------GKPSVAAFGDGTGLPTYDHI 453 (472)
T ss_pred HHHHHHHhcCHHHHHHHHHHHhc------CCceeccCCcccCCcchhhh
Confidence 99999999999999999999993 36778888887777766665
No 19
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.80 E-value=1.1e-18 Score=176.27 Aligned_cols=178 Identities=20% Similarity=0.232 Sum_probs=140.4
Q ss_pred cHHHHHHHHHHhccCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCC---CCCCCccccccccccceEEEEEe-ccccce
Q 001730 248 NLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGP---QIKPQFTVEGTIWKACKLFRLEA-VKDVHI 323 (1019)
Q Consensus 248 ~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 323 (1019)
+|.++|++||++||+|+||+++|+||++.++++++++++|+.|+... ...+......+.....+.+.... ..+...
T Consensus 2 it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
T PF05193_consen 2 ITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIVIPSKDESQSI 81 (184)
T ss_dssp --HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEEEEESSSSSEE
T ss_pred CCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhccccccccccccccccccccccccccccccccccccc
Confidence 78999999999999999999999999999999999999999999764 22221110111112233333333 337889
Q ss_pred EEEEEecCCCchhhhcChHHHHHHHhcCCCCCcHHHHHH-hcCccccccccccCCCCCCcccceEEEEEEEeChhhhhcH
Q 001730 324 LDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKI 402 (1019)
Q Consensus 324 v~i~~~~~~~~~~~~~~~~~~l~~lLg~~~~~~L~~~Lr-~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 402 (1019)
+.++|+.+...+..+..++.++..+|+++..++|+..|| ++|++|+++++..... +.|.|.|.+.+++ +++
T Consensus 82 v~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~~-----~~~~~~i~~~~~~---~~~ 153 (184)
T PF05193_consen 82 VSIAFPGPPIKDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSYR-----DSGLFSISFQVTP---ENL 153 (184)
T ss_dssp EEEEEEEEETGTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEES-----SEEEEEEEEEEEG---GGH
T ss_pred cccccccccccccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeeccc-----cceEEEEEEEcCc---ccH
Confidence 999999998844456788999999999999999999999 9999999988754321 2459999999988 689
Q ss_pred HHHHHHHHHHHHHHHHcCCchHHHHHHhhhc
Q 001730 403 FDIIGFVYQYIKLLRQVSPQKWIFKELQDIG 433 (1019)
Q Consensus 403 ~~v~~~i~~~l~~l~~~~~~~~~l~~~k~~~ 433 (1019)
+++++.+.++++.+++.|+++++++++|+++
T Consensus 154 ~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 154 DEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp HHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 9999999999999999999999999999753
No 20
>PTZ00432 falcilysin; Provisional
Probab=99.80 E-value=5e-17 Score=202.92 Aligned_cols=405 Identities=11% Similarity=0.032 Sum_probs=258.4
Q ss_pred eeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHH-----HhHhhhhcC--cEEEEEEe
Q 001730 572 IIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE-----IIYQASVAK--LETSVSIF 644 (1019)
Q Consensus 572 i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~e-----~~~~~~~~g--~~~~~~~~ 644 (1019)
.+..+|.+|++.+.+....|.+.+.+.|.++... ..+++.++..++..+... ........| ..++...+
T Consensus 95 ~H~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~~d----~~G~aH~LEH~~f~GS~k~p~~~~~~~l~~~gl~~~lNA~T~ 170 (1119)
T PTZ00432 95 SHKKTGLQVISLKTNDSSGKEMCFDFYVPTPPHN----DKGIPHILEHSVLSGSKKYNYKDSFSLLVQGGFNSFLNAYTF 170 (1119)
T ss_pred EEcCCCCEEEEEecCCCccceeEEEEEecCCCCC----CcchhHHHHHHHhCCCCCCCcccHHHHHHhcCcCCCccccCC
Confidence 4667899999888654334567777888887632 246777777777554332 222222344 34567777
Q ss_pred CceeEEEEeecCC-CHHHHHHHHHHHHhcCCCCHHHH--HH---------H--------------------HHHHHHHHH
Q 001730 645 SDKLELKVYGFND-KLPVLLSKILAIAKSFLPSDDRF--KV---------I--------------------KEDVVRTLK 692 (1019)
Q Consensus 645 ~~~~~l~~~g~s~-~l~~~l~~l~~~l~~~~~~~~~f--~~---------~--------------------k~~~~~~l~ 692 (1019)
.+...+.++..++ ++..+++++++.+.+|.|+++++ .+ . |..+.++++
T Consensus 171 ~D~T~Y~~~~~~e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~~Emk 250 (1119)
T PTZ00432 171 KDRTSYLFASTNEKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVYSEMK 250 (1119)
T ss_pred CCceEEEeccCCHHHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHHHHHHH
Confidence 7899999999886 59999999999999999987653 21 1 667899999
Q ss_pred hcccChhhHHHHHHHHhhcCCCC--CHHHHHHHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhc
Q 001730 693 NTNMKPLSHSSYLRLQVLCQSFY--DVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFS 770 (1019)
Q Consensus 693 ~~~~~p~~~a~~~~~~ll~~~~~--~~~~~~~~l~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~ 770 (1019)
...++|...+.+.+.+.++.++| ...|..+.|..+|.+++++||+++|.|.|+.++|+||++.+++.++++++++.++
T Consensus 251 ~~~~~p~~~~~~~~~~~lf~~pY~~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~~~f~~~~ 330 (1119)
T PTZ00432 251 KRFSDPLSFGYSVIYQNLFSNVYKYDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVDNYLTKHP 330 (1119)
T ss_pred HhhCCHHHHHHHHHHHHHhCCCCCCCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHHHHHhhcc
Confidence 99888999999988877764443 4578999999999999999999999999999999999999999999999997776
Q ss_pred CCCCCcc-ccc--cceeEEC--CCCCeEEEEecccCCCCccceeEEEEEEeccccC--------cccHHHHHHHHHHHHH
Q 001730 771 VQPLPIE-MRH--QECVICL--PSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKG--------MELTRLKALIDLFDEI 837 (1019)
Q Consensus 771 ~~~~~~~-~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~ 837 (1019)
....... ..+ ....... .......+..........+..+++..|.++|... ..+..+..++.+|+.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~VLs~l 410 (1119)
T PTZ00432 331 KTGQLSHTAYREDADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYLALLVLNYL 410 (1119)
T ss_pred cccccccccccccccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCccccccccccccCCHHHHHHHHHHHHH
Confidence 4421000 000 0000000 0011111111122222223334413365532100 1234566666666655
Q ss_pred h----chhhhHHhhhccccceEE-EeeeeeeCCeeeEEEEEeCCC--------CChhHHHHHHHHHHHHHHHHHhCCCHH
Q 001730 838 L----EEPFFNQLRTKEQLGYVV-ECSPRVTYRVFGFCFCIQSSK--------YNPIYLQERIDNFISGLDELLEGLDDE 904 (1019)
Q Consensus 838 l----ss~lf~~LRek~~L~Y~v-~s~~~~~~~~~~~~~~v~s~~--------~~~~~~~~~i~~~l~~~~~~~~~ise~ 904 (1019)
| +|+|++.||+ +||||.+ ++++......+.|.++++... ...+++.+.|.+.|+.+.. ++++++
T Consensus 411 Lggg~sS~L~q~LrE-~GLa~svv~~~~~~~~~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~l~~--eGi~~e 487 (1119)
T PTZ00432 411 LLGTPESVLYKALID-SGLGKKVVGSGLDDYFKQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALTKVVT--EGFNKS 487 (1119)
T ss_pred HcCCCccHHHHHHHh-cCCCcCCCcCcccCCCCceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHHHHHH--hCCCHH
Confidence 4 7899999996 7999995 455555555666666665321 1234566666666666654 689999
Q ss_pred HHHHHHHHHHHHHcCCCCC----HHHHHHHHHHHHhcCCCCCCc--hHHHHHHHhc-C--CHHHHHHHHHHhcccCCCCc
Q 001730 905 SFENYRSGLMAKLLEKDPS----LTYESNRFWNQITDKRYMFDQ--SQKEAEDLKS-I--KKNDVISWYKTYLQQWSPKC 975 (1019)
Q Consensus 905 el~~~k~~l~~~~~~~~~s----~~~~~~~~~~~i~~~~~~~~~--~~~~~~~i~~-v--t~edv~~~~~~~l~p~~~~~ 975 (1019)
+++++++.+.-++.....+ ....+......+..+.-+++. .+..++.|+. + +..-+.+..++||-. +.
T Consensus 488 ele~a~~qlef~~rE~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~~~~~~y~e~Li~k~ll~---N~ 564 (1119)
T PTZ00432 488 AVEASLNNIEFVMKELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRIDNESKYLEKLIEKHLLN---NN 564 (1119)
T ss_pred HHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHHhcccHHHHHHHHHHccC---CC
Confidence 9999999998888764321 112222222233222212221 2233344432 2 224588899999953 34
Q ss_pred cEEEEEEecCC
Q 001730 976 RRLAVRVWGCN 986 (1019)
Q Consensus 976 ~~~~v~v~G~~ 986 (1019)
..+.+++.|.+
T Consensus 565 h~~~v~~~p~~ 575 (1119)
T PTZ00432 565 HRVTVHLEAVE 575 (1119)
T ss_pred eeeEEEEecCC
Confidence 46777777776
No 21
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.64 E-value=4.6e-15 Score=149.85 Aligned_cols=180 Identities=21% Similarity=0.312 Sum_probs=118.1
Q ss_pred cCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCC--CccccccceeEECCCCCeEEEEecccCCC
Q 001730 726 GLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPL--PIEMRHQECVICLPSGANLVRNVSVKNKC 803 (1019)
Q Consensus 726 ~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 803 (1019)
++|.++|++||+++|.|.|+.++|+||++.+++.++++++++.++..+. +............+.....+ .....
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 76 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIV----IPSKD 76 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEE----EEESS
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhccccccccccccccccccccccccccc----ccccc
Confidence 4799999999999999999999999999999999999999999986531 00000000000011111111 11112
Q ss_pred CccceeEEEEEEeccc-cCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhH
Q 001730 804 ETNSVIEVLYFQIEQE-KGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIY 882 (1019)
Q Consensus 804 ~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~ll~~~lss~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~v~s~~~~~~~ 882 (1019)
..+..+. ++++..+. ...+.....++..+|+..++++||..||++++++|+|+++.....+.+.+.+++++. ++.
T Consensus 77 ~~~~~v~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~~~~~~~~i~~~~~---~~~ 152 (184)
T PF05193_consen 77 ESQSIVS-IAFPGPPIKDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSYRDSGLFSISFQVT---PEN 152 (184)
T ss_dssp SSSEEEE-EEEEEEETGTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEESSEEEEEEEEEEE---GGG
T ss_pred ccccccc-cccccccccccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeeccccceEEEEEEEcC---ccc
Confidence 2455555 56655322 123344555566666666677899999999999999999988777777777777665 334
Q ss_pred HHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHH
Q 001730 883 LQERIDNFISGLDELL-EGLDDESFENYRSGL 913 (1019)
Q Consensus 883 ~~~~i~~~l~~~~~~~-~~ise~el~~~k~~l 913 (1019)
+.+.++.+++.+.... .+++++||+++|+.|
T Consensus 153 ~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 153 LDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 4555555555555444 469999999999875
No 22
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.30 E-value=7.2e-10 Score=129.34 Aligned_cols=390 Identities=15% Similarity=0.077 Sum_probs=239.5
Q ss_pred ccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHH-----HHH--------HHHHHHHHHHHHHHHHhHhhhhcCcEEE
Q 001730 574 DEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVK-----NCI--------LTELFIHLLKDELNEIIYQASVAKLETS 640 (1019)
Q Consensus 574 ~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~-----~~~--------l~~l~~~~l~~~l~e~~~~~~~~g~~~~ 640 (1019)
...|.++.+...+ .|....+|.|.++....+.- ..+ +...|-.+++.+++-++- .+-+-.+.
T Consensus 27 ~~TGa~l~hi~~~---d~~~vFsi~F~T~p~dstGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~N--A~T~~D~T 101 (978)
T COG1026 27 EKTGAELAHIKNE---DPNNVFSIAFKTEPHDSTGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLN--AFTFPDKT 101 (978)
T ss_pred ccCCceEEEecCC---CcCceEEEEeecCCCCCCCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHh--hccCCCcc
Confidence 3468888777654 35778889988876543321 111 122344455555553321 11222222
Q ss_pred EEEeCceeEEEEee-cCCCHHHHHHHHHHHHhcCCCCHHHHHHH--------------HHHHHHHHHhcccChhhHHHHH
Q 001730 641 VSIFSDKLELKVYG-FNDKLPVLLSKILAIAKSFLPSDDRFKVI--------------KEDVVRTLKNTNMKPLSHSSYL 705 (1019)
Q Consensus 641 ~~~~~~~~~l~~~g-~s~~l~~~l~~l~~~l~~~~~~~~~f~~~--------------k~~~~~~l~~~~~~p~~~a~~~ 705 (1019)
+.. ++. -.+.+-.+++..+|.+.+|...++.|.++ +..+-.+.+....+|..+.++.
T Consensus 102 ~YP--------~sS~~~~Df~NLl~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~~~~ 173 (978)
T COG1026 102 VYP--------ASSANEKDFYNLLSVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVLSRA 173 (978)
T ss_pred eee--------ccccCcchHHHHHHHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHHHHH
Confidence 222 222 23678899999999999999888887655 3344567888888899999999
Q ss_pred HHHhhcCC-C--CCHHHHHHHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHH-HhhhcCCCCCcccccc
Q 001730 706 RLQVLCQS-F--YDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIF-KSIFSVQPLPIEMRHQ 781 (1019)
Q Consensus 706 ~~~ll~~~-~--~~~~~~~~~l~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~-~~~~~~~~~~~~~~~~ 781 (1019)
+.+.+++. . +..-|....|-.+|+|++++||+++|.|.|+.++++||++.++..+.++.. +..+..... ....+.
T Consensus 174 ~~~slfp~~ty~~~SGG~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~-~~~i~~ 252 (978)
T COG1026 174 MQQSLFPGTTYGVNSGGDPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKREL-DVPIPD 252 (978)
T ss_pred HHHhhCCCccccccCCCCcccccccCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhcccccccc-CCCCCc
Confidence 99999865 2 233457788999999999999999999999999999999999998877654 444433221 111111
Q ss_pred ceeEECCCCCeEEEEecccCCCCccceeEEEEEEeccccCcccHHHHHHHHHHHHHh----chhhhHHhhhccccc-eEE
Q 001730 782 ECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEIL----EEPFFNQLRTKEQLG-YVV 856 (1019)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~l----ss~lf~~LRek~~L~-Y~v 856 (1019)
...+.-+......+.+........+..+. +.|-.+ ...+..+..++.+|..++ .|+|.+.|-+. |+| +.+
T Consensus 253 ~~~~~~~~~~~~~ypi~~~~~de~q~~~~-lsWl~~---~~~d~~~~lal~vL~~iLl~~~asPl~~~lies-glg~~~~ 327 (978)
T COG1026 253 QKAFKKPRRKVLEYPISFDEEDEDQGLLS-LSWLGG---SASDAEDSLALEVLEEILLDSAASPLTQALIES-GLGFADV 327 (978)
T ss_pred ccccCcccccceeeccCCCCCCCceeEEE-EEEecC---CcccHHHHHHHHHHHHHHccCcccHHHHHHHHc-CCCcccc
Confidence 11111111111121222223333444444 556554 566778888899999886 46899999876 788 555
Q ss_pred EeeeeeeCCeeeEEEEEeCC-CCChhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCCCCHHHHHH--HHHH
Q 001730 857 ECSPRVTYRVFGFCFCIQSS-KYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESN--RFWN 933 (1019)
Q Consensus 857 ~s~~~~~~~~~~~~~~v~s~-~~~~~~~~~~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~~~~~s~~~~~~--~~~~ 933 (1019)
...+....-...|.+.+++- ....+.+.+.+.+.++++.+ .+++.+.++.++.++.=++......+.+.+- ++..
T Consensus 328 ~g~~~~~~~~~~f~v~~~gv~~ek~~~~k~lV~~~L~~l~~--~gi~~~~ie~~~~q~E~s~ke~~s~pfgl~l~~~~~~ 405 (978)
T COG1026 328 SGSYDSDLKETIFSVGLKGVSEEKIAKLKNLVLSTLKELVK--NGIDKKLIEAILHQLEFSLKEVKSYPFGLGLMFRSLY 405 (978)
T ss_pred cceeccccceeEEEEEecCCCHHHHHHHHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHhhhhhcCCCccHHHHHHhcc
Confidence 44455544445555555542 23455666666677766654 5799999999998888777764343333322 2222
Q ss_pred HHhcCCCCCCch--HHHHHHHhc-CCHHH-HHHHHHHhcccCCCCccEEEEEEecCCC
Q 001730 934 QITDKRYMFDQS--QKEAEDLKS-IKKND-VISWYKTYLQQWSPKCRRLAVRVWGCNT 987 (1019)
Q Consensus 934 ~i~~~~~~~~~~--~~~~~~i~~-vt~ed-v~~~~~~~l~p~~~~~~~~~v~v~G~~~ 987 (1019)
....+.-+++.+ ...++.|++ +.... +.+..++||-- +...+.|.+.+...
T Consensus 406 gw~~G~dp~~~Lr~~~~~~~Lr~~le~~~~fe~LI~ky~l~---N~h~~~v~~~Ps~~ 460 (978)
T COG1026 406 GWLNGGDPEDSLRFLDYLQNLREKLEKGPYFEKLIRKYFLD---NPHYVTVIVLPSPE 460 (978)
T ss_pred ccccCCChhhhhhhHHHHHHHHHhhhcChHHHHHHHHHhhc---CCccEEEEEecChH
Confidence 222232233322 234444433 44444 88999999953 33367777776653
No 23
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=1.5e-08 Score=117.97 Aligned_cols=402 Identities=11% Similarity=0.014 Sum_probs=248.8
Q ss_pred CCeEeeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHH------HhHhhhhcCcEEEE
Q 001730 568 SPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE------IIYQASVAKLETSV 641 (1019)
Q Consensus 568 ~P~~i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~e------~~~~~~~~g~~~~~ 641 (1019)
.-..+...||+++.+..|+. .++...-+.+..+...++.+..+++.++-.|+--+..+ +..-...-|.+.+.
T Consensus 23 ~y~~I~LpNGl~~LlisDP~--a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhgGs~NA 100 (937)
T COG1025 23 KYRAIKLPNGLRALLVSDPQ--ADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGSHNA 100 (937)
T ss_pred ceeEEECCCCceEEEecCCC--CCccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcCCcccc
Confidence 34678899999999999876 66888888888888888888889999888887743322 22233445666777
Q ss_pred EEeCceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCC-CCCH--H
Q 001730 642 SIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS-FYDV--D 718 (1019)
Q Consensus 642 ~~~~~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~~p~~~a~~~~~~ll~~~-~~~~--~ 718 (1019)
....+...+.+....+.++.+++.+++++.+|.|+++..++++..+-.++.....+=.+........++.+. +++. .
T Consensus 101 ~T~~~~T~fyFeV~~~al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~srFs~ 180 (937)
T COG1025 101 STAGERTAFYFEVENDALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKFST 180 (937)
T ss_pred ccCCCceeEEEEecHHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCccccCC
Confidence 777777788888888999999999999999999999999999999999999887763333333444444433 2221 3
Q ss_pred HHHHHhcc----CCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEECCCCCeEE
Q 001730 719 EKLSILHG----LSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLV 794 (1019)
Q Consensus 719 ~~~~~l~~----it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1019)
|.+++|.. ...+++..||+++|++++|.++|.|+=+.+++.++...+++.++......+..+.+.......+. ++
T Consensus 181 GN~~TL~~~p~~~v~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p~~p~p~~~d~~t~~-ii 259 (937)
T COG1025 181 GNLETLSDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPPIPVPVVTDEQTGK-II 259 (937)
T ss_pred CChhhhccCCCchHHHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCChHHhCc-eE
Confidence 44555544 56899999999999999999999999999999999999999998764332222211111111111 11
Q ss_pred EEecccCCCCccceeEEEEEEeccccCcc-cHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeee-EEEE
Q 001730 795 RNVSVKNKCETNSVIEVLYFQIEQEKGME-LTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFG-FCFC 872 (1019)
Q Consensus 795 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~ll~~~lss~lf~~LRek~~L~Y~v~s~~~~~~~~~~-~~~~ 872 (1019)
. ..|..+...+. +++++....... .....+...|||.==..-|-..|. ++||+-.+.++.....+-.+ +.+.
T Consensus 260 ~----i~p~~~~~~L~-i~f~i~~~~~~~~~~~~~~~s~Lig~es~gsL~~~Lk-~~Glit~l~a~~~~~~~n~~~f~is 333 (937)
T COG1025 260 H----IVPAKPRPRLR-IYFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWLK-KQGLITELSAGLDPISGNYGVFAIS 333 (937)
T ss_pred E----eccCCCCceEE-EEEEcCCcccccccCCHHHHHHHhccCCCchHHHHHH-hccchhhhccccccccCCcceEEEE
Confidence 1 11222344445 566663111111 223445555555433334445555 56899999988887654333 5444
Q ss_pred E---eCCCCChhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHhcCCCCCCchHHH
Q 001730 873 I---QSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDP-SLTYESNRFWNQITDKRYMFDQSQKE 948 (1019)
Q Consensus 873 v---~s~~~~~~~~~~~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~~~~~-s~~~~~~~~~~~i~~~~~~~~~~~~~ 948 (1019)
+ ..+....+++...+-++++-+.. .++....|++...-.--.+..... .......++.... ..++.+..-..
T Consensus 334 ~~LT~~Gl~~~~~VI~~~F~yl~~l~~--~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~m--~~~p~~~~~~~ 409 (937)
T COG1025 334 YELTDKGLAHYDRVIALTFQYLNLLRE--KGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADNM--EREPVEHTLYA 409 (937)
T ss_pred eehhhcchhhHHHHHHHHHHHHHHHHh--ccchhhHHHHHHHHHHhhhcccccCChHHHHHHHHHhc--ccCChhhhhch
Confidence 3 23334555555555555555443 456666666554443333333222 2223333332222 22222222222
Q ss_pred HHHHhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCCC
Q 001730 949 AEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTN 988 (1019)
Q Consensus 949 ~~~i~~vt~edv~~~~~~~l~p~~~~~~~~~v~v~G~~~~ 988 (1019)
.-.+..-..++++.++.-.. |+ ...+...++...
T Consensus 410 ~~~~~~yd~~~~~~~l~~~~-pe-----n~R~~lis~~~~ 443 (937)
T COG1025 410 SLVLPRYDPKAIQERLALMT-PE-----NARLWLISKLEE 443 (937)
T ss_pred hhcccccCHHHHHHHHHhhC-cc-----ceEEEEecCCCC
Confidence 22345566788888888655 66 455555555443
No 24
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.09 E-value=3.6e-07 Score=95.43 Aligned_cols=378 Identities=11% Similarity=0.050 Sum_probs=234.6
Q ss_pred ccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHH-----HHhHhhhhcCcEEEEEEeCcee
Q 001730 574 DEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN-----EIIYQASVAKLETSVSIFSDKL 648 (1019)
Q Consensus 574 ~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~-----e~~~~~~~~g~~~~~~~~~~~~ 648 (1019)
..+|+.|--...+ .|...+.+.|+.+.-+.+..+.++..++-........ .+....+..|..++....++.+
T Consensus 28 l~ngL~Vas~e~~---~~is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~se~~GG~Lss~~tRe~~ 104 (429)
T KOG2583|consen 28 LVNGLTVASREAP---TAISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRESEQLGGTLSSTATRELI 104 (429)
T ss_pred cccceEEEeccCC---CcceEEEEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhhHhhCceeeeeeecceE
Confidence 4567777666543 4788999999999888877766776655443332222 2455667789999999999999
Q ss_pred EEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHhcccChhhHHHHHHHHhhcCCCCCHHHHH--HHhc
Q 001730 649 ELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIK-EDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKL--SILH 725 (1019)
Q Consensus 649 ~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k-~~~~~~l~~~~~~p~~~a~~~~~~ll~~~~~~~~~~~--~~l~ 725 (1019)
.+++..+.++++-.+.++.+++..|.|.+=+++... ..+...+ ...+|+..+++.+.+..+.+.....-.. -.+.
T Consensus 105 ~~tvt~lrd~~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l--~~~t~~~~a~e~lH~aAfRngLgnslY~p~~~vg 182 (429)
T KOG2583|consen 105 GLTVTFLRDDLEYYLSLLGDVLDAPAFKPWELEDVVLATIDADL--AYQTPYTIAIEQLHAAAFRNGLGNSLYSPGYQVG 182 (429)
T ss_pred EEEEEEecccHHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHh--hhcChHHHHHHHHHHHHHhcccCCcccCCccccc
Confidence 999999999999999999999999999886665554 3333332 2335999999999888876533221111 2378
Q ss_pred cCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEECCCCCeEEEEecccCCCCc
Q 001730 726 GLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCET 805 (1019)
Q Consensus 726 ~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1019)
+++.++|..|.++.|...|+.++-+ |++.+..+...+++.......+.. +.. .....+ .. +. .....
T Consensus 183 ~vss~eL~~Fa~k~fv~gn~~lvg~-nvd~~~L~~~~~~~~~~~~~~~~k----~a~--a~~~gG-e~--Rk---~~~g~ 249 (429)
T KOG2583|consen 183 SVSSSELKDFAAKHFVKGNAVLVGV-NVDHDDLKQFADEYAPIRDGLPLK----PAP--AKYSGG-EA--RK---DARGN 249 (429)
T ss_pred CccHHHHHHHHHHHhhccceEEEec-CCChHHHHHHHHHhccccCCCCCC----CCC--ccccCC-cc--cc---ccCCc
Confidence 8999999999999999999887654 578888888887763222111110 000 000111 10 10 01112
Q ss_pred cceeEEEEEEeccccCcccHHHHHHHHHHHHHhc--------hhhhHHhhhcc-ccceEEEeeeeeeCCeeeEEEEEeCC
Q 001730 806 NSVIEVLYFQIEQEKGMELTRLKALIDLFDEILE--------EPFFNQLRTKE-QLGYVVECSPRVTYRVFGFCFCIQSS 876 (1019)
Q Consensus 806 ~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~ls--------s~lf~~LRek~-~L~Y~v~s~~~~~~~~~~~~~~v~s~ 876 (1019)
...++ ...-|. ...+.+...+..++-+.+. .-++.++--.- +-|-++.+...++.+.+-+.+++...
T Consensus 250 ~~~v~--vagegA--Aa~~~k~~~a~av~~~~Lg~~~~~k~~t~~~~~aa~~a~~~~~s~sA~~a~ysDsGL~gv~~~~~ 325 (429)
T KOG2583|consen 250 RVHVA--VAGEGA--AAGNLKVLAAQAVLLAALGNSAPVKRGTGLLSEAAGAAGEQGASASAFNAPYSDSGLFGVYVSAQ 325 (429)
T ss_pred eeEEE--EecCcc--cccchHHHHHHHHHHHHHhcccccccccchHHHHHhhccccCceeeeecccccCCceEEEEEEec
Confidence 22222 221110 1233444444445544442 12333333221 12445555555666555555554332
Q ss_pred CCChhHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHhcC
Q 001730 877 KYNPIYLQERIDNFISGLDELL-EGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSI 955 (1019)
Q Consensus 877 ~~~~~~~~~~i~~~l~~~~~~~-~~ise~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~v 955 (1019)
.. ...+.+......+...+ .+++-..-+.+++.+...+......+......... . ......+++.|++|
T Consensus 326 ~~---~a~~~v~s~v~~lks~~~~~id~~~~~a~~~~l~~~~~ss~~a~~~~~~~~a~-----~--~~~~d~~i~~id~V 395 (429)
T KOG2583|consen 326 GS---QAGKVVSSEVKKLKSALVSDIDNAKVKAAIKALKASYLSSVEALELATGSQAN-----L--VSEPDAFIQQIDKV 395 (429)
T ss_pred Cc---cHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcchHHHHHhhHHHhc-----C--CCChHHHHHHhccc
Confidence 12 23445555555555443 57887777778888888777655554333332211 0 12667899999999
Q ss_pred CHHHHHHHHHHhcccCCCCccEEEEEEecCCCCc
Q 001730 956 KKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNI 989 (1019)
Q Consensus 956 t~edv~~~~~~~l~p~~~~~~~~~v~v~G~~~~~ 989 (1019)
|..||++++++++. .++++.-+|+-+.+
T Consensus 396 t~sdV~~a~kk~~s------~kls~aA~Gnl~~v 423 (429)
T KOG2583|consen 396 TASDVQKAAKKFLS------GKLSLAAYGNLSNV 423 (429)
T ss_pred cHHHHHHHHHHhcc------CcceeeeeccccCC
Confidence 99999999999872 37899988886543
No 25
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=1.1e-07 Score=104.88 Aligned_cols=391 Identities=13% Similarity=0.060 Sum_probs=231.7
Q ss_pred eeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCH-----H--------HHHHHHHHHHHHHHHHHHHhHhhhhcCcE
Q 001730 572 IIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNV-----K--------NCILTELFIHLLKDELNEIIYQASVAKLE 638 (1019)
Q Consensus 572 i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~-----~--------~~~l~~l~~~~l~~~l~e~~~~~~~~g~~ 638 (1019)
.+...|.++.+...+. ++..+++.|++|....+. + +.....=|..||+.++.-++- .+.+-.
T Consensus 57 kH~~Tgae~lhl~reD---~N~vFsI~FrTpp~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmN--AfT~pD 131 (998)
T KOG2019|consen 57 KHKKTGAEVLHLDRED---ENNVFSIVFRTPPKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMN--AFTAPD 131 (998)
T ss_pred eecCCCceeEeeccCC---CCceeEEEeecCCCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHh--hccCCC
Confidence 3556688886665433 356788888887653221 1 111223355666666653321 111111
Q ss_pred EEEEEeCceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHH------------------HHHHHHHHHHhcccChhh
Q 001730 639 TSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKV------------------IKEDVVRTLKNTNMKPLS 700 (1019)
Q Consensus 639 ~~~~~~~~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~------------------~k~~~~~~l~~~~~~p~~ 700 (1019)
+.+.. -.+.-...+..+.+..+|....|..-+..|.. .|..+-.+.+....+|.+
T Consensus 132 ~T~yP-------fattN~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~ 204 (998)
T KOG2019|consen 132 YTFYP-------FATTNTKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDY 204 (998)
T ss_pred cceee-------cccCChHHHHHHHHHhhhcccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccChhH
Confidence 22221 12223356778888888888887654444443 255666778888888888
Q ss_pred HHHHHHHHhhcCC-CCCH--HHHHHHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCcc
Q 001730 701 HSSYLRLQVLCQS-FYDV--DEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIE 777 (1019)
Q Consensus 701 ~a~~~~~~ll~~~-~~~~--~~~~~~l~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~ 777 (1019)
+....+.+.+++. .|+. -|..-.|-.++++++++||+++|.|.|+.++-+||+..++....++.-+..+......
T Consensus 205 if~~~~Qq~L~p~~tYgv~SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s-- 282 (998)
T KOG2019|consen 205 IFGMLFQQALFPENTYGVNSGGDPLDIPDLTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELS-- 282 (998)
T ss_pred HHHHHHHHhhCccccccccCCCCcccCccccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhccccccccc--
Confidence 8888888877754 4443 3466778999999999999999999999999999999999887776544443322111
Q ss_pred ccccceeEECCCCCeEEEEeccc--CCCCccceeEEEEEEeccccCcccHHHHHHHHHHHHHh----chhhhHHhhhccc
Q 001730 778 MRHQECVICLPSGANLVRNVSVK--NKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEIL----EEPFFNQLRTKEQ 851 (1019)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~l----ss~lf~~LRek~~ 851 (1019)
..... .....+...++...... ..-..+.... +.+..+ ...+.....++.+|+.+| +|+|++.|-|. |
T Consensus 283 ~kv~~-qk~f~kp~rvve~~p~d~~~~p~Kq~~~s-~s~L~~---~p~d~~etfaL~~L~~Ll~~gpsSp~yk~LiES-G 356 (998)
T KOG2019|consen 283 SKVTF-QKLFDKPRRVVEKGPADPGDLPKKQTKCS-NSFLSN---DPLDTYETFALKVLSHLLLDGPSSPFYKALIES-G 356 (998)
T ss_pred Ccccc-ccccccCceeeeecCCCCCCCccceeEEE-EEeecC---CchhHHHHHHHHHHHHHhcCCCccHHHHHHHHc-C
Confidence 10000 01111111111111111 1111233333 344343 344556778888888876 78999999986 7
Q ss_pred cc--eEEEeeeeeeCCeeeEEEEEeCC-CCChhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCCCCHHH-H
Q 001730 852 LG--YVVECSPRVTYRVFGFCFCIQSS-KYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTY-E 927 (1019)
Q Consensus 852 L~--Y~v~s~~~~~~~~~~~~~~v~s~-~~~~~~~~~~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~~~~~s~~~-~ 927 (1019)
|| ..|.+++....-...|.+.+|.- ..+.+.+++.|...++.+.. .+++.+.++.....+--++.......+- .
T Consensus 357 LGtEfsvnsG~~~~t~~~~fsVGLqGvseediekve~lV~~t~~~lae--~gfd~drieAil~qiEislk~qst~fGL~L 434 (998)
T KOG2019|consen 357 LGTEFSVNSGYEDTTLQPQFSVGLQGVSEEDIEKVEELVMNTFNKLAE--TGFDNDRIEAILHQIEISLKHQSTGFGLSL 434 (998)
T ss_pred CCcccccCCCCCcccccceeeeeeccccHHHHHHHHHHHHHHHHHHHH--hccchHHHHHHHHHhhhhhhccccchhHHH
Confidence 77 77888888766666666666652 24667777777777777765 5788888887777766666654433221 1
Q ss_pred HHHHHHHHhcCCCCCCchH------HHHHHHhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCC
Q 001730 928 SNRFWNQITDKRYMFDQSQ------KEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNT 987 (1019)
Q Consensus 928 ~~~~~~~i~~~~~~~~~~~------~~~~~i~~vt~edv~~~~~~~l~p~~~~~~~~~v~v~G~~~ 987 (1019)
+......+..+.-+|++.. ...+.+..-...=++...++|+. ++..++++.+.+...
T Consensus 435 ~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~~lfq~lIkkYil---nn~h~~t~smqpd~e 497 (998)
T KOG2019|consen 435 MQSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSKKLFQPLIKKYIL---NNPHCFTFSMQPDPE 497 (998)
T ss_pred HHHHhhhhccCCCccchhhhhhHHHHHHHHHhhhchhHHHHHHHHHHh---cCCceEEEEecCCch
Confidence 2222222222222454332 22333333345558888999994 356689999988764
No 26
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=2.4e-07 Score=110.36 Aligned_cols=319 Identities=12% Similarity=-0.025 Sum_probs=204.3
Q ss_pred CCeEeeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHh------HhhhhcCcEEEE
Q 001730 568 SPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEII------YQASVAKLETSV 641 (1019)
Q Consensus 568 ~P~~i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~e~~------~~~~~~g~~~~~ 641 (1019)
.-..+...||+++.+..|+... +....+.+.-+...++....+++.+.-.|+-.+..++. .-..--|.+.+.
T Consensus 27 ~yr~~~L~Ngl~alLisDp~tD--~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA 104 (974)
T KOG0959|consen 27 EYRGIELTNGLRALLISDPKTD--KSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNA 104 (974)
T ss_pred ceeEEEecCCceEEEecCCCCC--ccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCcccc
Confidence 3456788999999999987633 55666666677777778888999988888875443321 222224445555
Q ss_pred EEeCceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCC-CCC--HH
Q 001730 642 SIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS-FYD--VD 718 (1019)
Q Consensus 642 ~~~~~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~~p~~~a~~~~~~ll~~~-~~~--~~ 718 (1019)
....+.....+..-.+.++.+|+.+++++.+|.|.++..++++..+..++++...+-.+.-....+.+..+. ++. ..
T Consensus 105 ~T~~e~T~y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~t 184 (974)
T KOG0959|consen 105 YTDSEHTNYYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFST 184 (974)
T ss_pred ccccccceEEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhccc
Confidence 555566666666667889999999999999999999999999999999999988775554444444444433 222 24
Q ss_pred HHHHHhccCC-----HHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEECCCCCeE
Q 001730 719 EKLSILHGLS-----LADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANL 793 (1019)
Q Consensus 719 ~~~~~l~~it-----~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1019)
|..+.|...- .+.|.+||+++|..++|.++|+|+-+.+....++...|+..++...+.+..+..+ ...+.-...
T Consensus 185 GN~~tL~~~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f~~~p-~~~e~~~~~ 263 (974)
T KOG0959|consen 185 GNKKTLLEGPREIDLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVFPEPP-FLPEELKKL 263 (974)
T ss_pred cchhhhhhccccchHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCcccCCC-CChHHhCcE
Confidence 5666666665 8999999999999999999999999999888888888888877654432222220 100111112
Q ss_pred EEEecccCCCCccceeEEEEEEecccc-CcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeee-eCCeeeEEE
Q 001730 794 VRNVSVKNKCETNSVIEVLYFQIEQEK-GMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRV-TYRVFGFCF 871 (1019)
Q Consensus 794 ~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~ll~~~lss~lf~~LRek~~L~Y~v~s~~~~-~~~~~~~~~ 871 (1019)
+..+++. .-..+. +.|.+++-. .-...+......|+|.--.+-|...||.+ |++-+..++... ..+.+.+.+
T Consensus 264 ~~v~pik----~~~~l~-is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~~-gw~~sl~a~~~~~as~~~~f~v 337 (974)
T KOG0959|consen 264 VRVVPIK----DGRSLM-ISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLKRL-GWATSLEAGIPEFASGYSFFNV 337 (974)
T ss_pred EEEEecc----ccceEE-EEEecCCcccccccCcHHHHHHHhccCCcchHHHHHHHh-hchheeecCCCccccccceEEE
Confidence 2111121 223333 345553210 01233556666677765567788999964 666666666653 334444545
Q ss_pred EEeCCCCChhHHHHHHHHHHHHHH
Q 001730 872 CIQSSKYNPIYLQERIDNFISGLD 895 (1019)
Q Consensus 872 ~v~s~~~~~~~~~~~i~~~l~~~~ 895 (1019)
.+.-+..--+.+.+.|....+.+.
T Consensus 338 ~idLtd~G~e~~~~ii~~~f~yi~ 361 (974)
T KOG0959|consen 338 SIDLTDEGLEHVDEIIGLVFNYIK 361 (974)
T ss_pred EEEeccccchhHHHHHHHHHHHHH
Confidence 443322333444444444444443
No 27
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=5.1e-06 Score=92.06 Aligned_cols=308 Identities=13% Similarity=0.118 Sum_probs=182.2
Q ss_pred eeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHH----------HHHHHHHHhcccChhhHHHHHHHHhhcCC--C
Q 001730 647 KLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIK----------EDVVRTLKNTNMKPLSHSSYLRLQVLCQS--F 714 (1019)
Q Consensus 647 ~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k----------~~~~~~l~~~~~~p~~~a~~~~~~ll~~~--~ 714 (1019)
..+++..| .+.+-+++...++-+.+|.+++++|-.+. ..+-.+.++...+......+..+.++|+. +
T Consensus 100 ~YtLStag-~dGFlklLPvy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~sg 178 (1022)
T KOG0961|consen 100 AYTLSTAG-SDGFLKLLPVYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYPPFSG 178 (1022)
T ss_pred eEEeeccc-ccchHHHhHHHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecCCCCC
Confidence 34444444 36788999999999999999999987663 33344555544444444555666677754 2
Q ss_pred C--CHHHHHHHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccc-ccc-ceeE----E
Q 001730 715 Y--DVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEM-RHQ-ECVI----C 786 (1019)
Q Consensus 715 ~--~~~~~~~~l~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~-~~~-~~~~----~ 786 (1019)
| ..-|....|..+|.+.+++||+++|.+.|+-+.|+|+++.++.....+.+-..+...+...+. .+. .... .
T Consensus 179 Y~~eTGG~~knLR~lt~ekIR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~rPf~~tn~~~~ 258 (1022)
T KOG0961|consen 179 YAVETGGRLKNLRELTLEKIRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPRPFSFTNALSD 258 (1022)
T ss_pred ceeccCCChhhHHHhhHHHHHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCCCcccccCccc
Confidence 2 234677888889999999999999999999999999999999998877776655443221111 111 1111 1
Q ss_pred CCCCCeEEEEecccCCCCccceeEEEEEEeccccCcccHHHHHHHHHHHHHhch----hhhHHhhh-ccccceEEEeeee
Q 001730 787 LPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEE----PFFNQLRT-KEQLGYVVECSPR 861 (1019)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~lss----~lf~~LRe-k~~L~Y~v~s~~~ 861 (1019)
++..+ +..++++..+..+..+. ..| .|+ ++.+.....++.+|-.+++. +|-+.+.+ +.-+|-.|++...
T Consensus 259 i~e~t--~~tVefp~~Des~G~v~-~aW-~g~--s~sD~~t~~a~~vL~dyls~savapf~~~fVeieDP~assv~f~~~ 332 (1022)
T KOG0961|consen 259 IKEST--VHTVEFPTDDESRGAVE-VAW-FGH--SPSDLETHSALHVLFDYLSNSAVAPFQKDFVEIEDPLASSVSFHIA 332 (1022)
T ss_pred CCccc--eeeeecCCcccccceEE-EEE-cCC--CHHHhhhHHHHHHHHHHhccccccccccceEEecCccccceeeeee
Confidence 22222 22345565566667777 566 332 44556677778888887763 55454444 4456666665554
Q ss_pred e-eCCeeeEEEEEeCCCCChhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCC
Q 001730 862 V-TYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRY 940 (1019)
Q Consensus 862 ~-~~~~~~~~~~v~s~~~~~~~~~~~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~ 940 (1019)
. .++. +...+++ +..+++...-..+++.+.+. ..++=+.+......-+-++..+.+.. +...++.++.+++
T Consensus 333 ~~vrc~--i~L~f~g--VP~EKi~~~~~k~l~~l~et-~~iDm~Rm~~~i~~t~~~yL~nlE~n---~~s~fms~ii~d~ 404 (1022)
T KOG0961|consen 333 EGVRCD--IRLNFAG--VPVEKIDECAPKFLDKLVET-ANIDMERMGYLIDQTILNYLVNLETN---APSDFMSHIIGDQ 404 (1022)
T ss_pred ccccee--EEEeecC--CcHHHhhhhhHHHHHHHHHh-cccCHHHHHHHHHHHHHHHHHhhhcC---ChHHHHHHHhhhh
Confidence 3 2232 2233344 56777877777888777532 24554444444333333333222211 1112222222222
Q ss_pred CCCchH-----------HHHHHHhcCCHHHHHHHHHHhcc
Q 001730 941 MFDQSQ-----------KEAEDLKSIKKNDVISWYKTYLQ 969 (1019)
Q Consensus 941 ~~~~~~-----------~~~~~i~~vt~edv~~~~~~~l~ 969 (1019)
-++..+ .+.+.|++-...|-+...+|||.
T Consensus 405 ~ygnedg~~l~~~lk~l~~~~~L~~w~~kdW~~Llnk~Fv 444 (1022)
T KOG0961|consen 405 LYGNEDGELLKKRLKELDFLKKLKSWPAKDWVQLLNKYFV 444 (1022)
T ss_pred hccCcchhHHHHHHHhHHHHHHHhhccHHHHHHHHHHHhc
Confidence 121111 34556667778889999999995
No 28
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=98.57 E-value=4.5e-07 Score=87.55 Aligned_cols=133 Identities=12% Similarity=0.084 Sum_probs=112.3
Q ss_pred eEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHH-----HHHhHhhhhcCcEEEEEEeCceeEEEEe
Q 001730 579 RFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDEL-----NEIIYQASVAKLETSVSIFSDKLELKVY 653 (1019)
Q Consensus 579 ~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l-----~e~~~~~~~~g~~~~~~~~~~~~~l~~~ 653 (1019)
+|.+..++. .|.+.+.+.|..+...++....+++.|+..++.... .++.......|.+++...+.+.+.+.++
T Consensus 1 ~V~~~~~~~--~~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~l~~~l~~~G~~~~~~t~~d~t~~~~~ 78 (149)
T PF00675_consen 1 KVVLVEDPG--SPVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDELQEELESLGASFNASTSRDSTSYSAS 78 (149)
T ss_dssp EEEEEESTT--SSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHHHHHHHHHTTCEEEEEEESSEEEEEEE
T ss_pred CEEEEEcCC--CCEEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhhhHHHhhhhccccceEecccceEEEEE
Confidence 456666543 678999999988888888888889888888776542 2344445668999999999999999999
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCC
Q 001730 654 GFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS 713 (1019)
Q Consensus 654 g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~~p~~~a~~~~~~ll~~~ 713 (1019)
+++++++.+++++.+++.+|.|+++.|+++|..++.+++....+|..++.+.+.+.++.+
T Consensus 79 ~~~~~~~~~l~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~ 138 (149)
T PF00675_consen 79 VLSEDLEKALELLADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRG 138 (149)
T ss_dssp EEGGGHHHHHHHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred EecccchhHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999988889889999998888753
No 29
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=98.09 E-value=5.4e-05 Score=80.93 Aligned_cols=170 Identities=16% Similarity=0.213 Sum_probs=103.7
Q ss_pred EEEEe-CCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeC-hhhHHHHHHHH
Q 001730 101 AAMCV-GMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIK-REFLKGALMRF 178 (1019)
Q Consensus 101 ~~l~~-~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~-~~~l~~~L~~l 178 (1019)
+.+.+ ..|.-.|-.+..|+||+|||++-. |.. .++ -.||+|++.+..|..... ...-..++.-+
T Consensus 20 IYlGIs~FGFe~DI~~iLGiAHLLEHILIs----FD~----~~F------~ANASTaRsYMSFWC~si~g~~~~DAvrtl 85 (590)
T PF03410_consen 20 IYLGISNFGFENDIGEILGIAHLLEHILIS----FDS----SKF------LANASTARSYMSFWCKSIRGRTYIDAVRTL 85 (590)
T ss_pred eEEeecccccccchHHHHhHHHHHHHHeee----cch----HHh------hcccchhhhhhhhhhhhccCCChhHHHHHH
Confidence 44444 567778888899999999999972 222 222 358999999999887643 33344455555
Q ss_pred HhhccC-----CCCChhHHHHHHHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcchhhhhcCccHHHHH
Q 001730 179 SQFFIS-----PLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQI 253 (1019)
Q Consensus 179 ~~~~~~-----P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l 253 (1019)
..||+. -.|+...++.....+.+|+-- .+.-..+++.+.-+. +|.-|. +|-..-|.+-. ...+-|
T Consensus 86 iSWFF~~g~Lk~~F~~~~i~~hikELENEYYF--RnEvfHCmDvLtfL~-gGDLYN---GGRi~ML~~l~----~i~~mL 155 (590)
T PF03410_consen 86 ISWFFDNGKLKDNFSRSKIKNHIKELENEYYF--RNEVFHCMDVLTFLG-GGDLYN---GGRIDMLNNLN----DIRNML 155 (590)
T ss_pred HHHhhcCCcccccccHhHHHHHHHHHhhhhhh--hhhHHHHHHHHHHhc-CCcccC---CchHHHHhhhH----HHHHHH
Confidence 555543 347777777777778888753 345566777776544 444552 23333333200 122223
Q ss_pred HHHHHhccCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCC
Q 001730 254 MKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIK 297 (1019)
Q Consensus 254 ~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~ 297 (1019)
.+=-+ .....|.++++-- ++ +.+..++++.||.+|..+...
T Consensus 156 ~~RM~-~I~GpniVIFVk~-l~-~~~l~lL~~TFGtLP~cP~~I 196 (590)
T PF03410_consen 156 SNRMH-RIIGPNIVIFVKE-LN-PNILSLLSNTFGTLPSCPLTI 196 (590)
T ss_pred HHHHH-hhcCCcEEEEEec-cC-HHHHHHHHHhcCCCCCCcccc
Confidence 22222 2345555555544 66 678889999999999876543
No 30
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=97.97 E-value=2.6e-05 Score=81.78 Aligned_cols=167 Identities=14% Similarity=0.128 Sum_probs=106.2
Q ss_pred CCCCCceecccCCCCCCCCCCCCeEeeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 001730 547 FIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN 626 (1019)
Q Consensus 547 fip~~~~l~~~~~~~~~~~~~~P~~i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~ 626 (1019)
.+|. +++.+...... .+|......+|+.|++.+..+ ++.+|+++.++....+.+...+..|++.++.....
T Consensus 53 ~LP~-L~~~Di~~~~~----~~~~~~~~~~~~~v~~~~~~T----nGI~Y~~l~fdl~~l~~e~l~yl~Ll~~ll~~lgT 123 (248)
T PF08367_consen 53 TLPT-LSLSDIPREIE----KIPLEVEKLGGIPVLFHEQPT----NGIVYVRLYFDLSDLPEEDLPYLPLLTDLLGELGT 123 (248)
T ss_dssp TS-----GGGS-SS----------EECCCTTCEEEEEE-------TTEEEEEEEEE-TTS-CCCHCCHHHHHHHCCCS-B
T ss_pred HHcc-ccHHhcCCCCC----CCCceeeecCCccEEEEEcCC----CCeEEEEEEecCCCCCHHHHHhHHHHHHHHHhCCC
Confidence 3553 56655554432 356666667899998888665 67788888888776677777888999998876432
Q ss_pred H--------HhHhhhhcCcEEEEEEeC---------ceeEEEEeecCCCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHH
Q 001730 627 E--------IIYQASVAKLETSVSIFS---------DKLELKVYGFNDKLPVLLSKILAIAKSFLPSD-DRFKVIKEDVV 688 (1019)
Q Consensus 627 e--------~~~~~~~~g~~~~~~~~~---------~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~-~~f~~~k~~~~ 688 (1019)
+ ......++|+++++.+.. .++.|+.+++.++++++++++.++|.++.|++ +++..+..+..
T Consensus 124 ~~~sy~el~~~i~~~tGGis~~~~~~~~~~~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~rl~~ll~~~~ 203 (248)
T PF08367_consen 124 KNYSYEELSNEIDLYTGGISFSIEVYTDYDDDDKYRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKERLKELLKELK 203 (248)
T ss_dssp SSS-HHHHHHHHHHHSSEEEEEEEEEEEECTECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCeEEEeeeccCCCCccceeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH
Confidence 2 123456688988886653 36999999999999999999999999999975 56776667777
Q ss_pred HHHHhcccC-hhhHHHHHHHHhhcCCCCCHHHHHHH-hccC
Q 001730 689 RTLKNTNMK-PLSHSSYLRLQVLCQSFYDVDEKLSI-LHGL 727 (1019)
Q Consensus 689 ~~l~~~~~~-p~~~a~~~~~~ll~~~~~~~~~~~~~-l~~i 727 (1019)
..+.+...+ ++.+|..++. ..++..+.+.. +..+
T Consensus 204 s~~~~~i~~~Gh~~A~~ra~-----s~~s~~~~~~e~~~Gl 239 (248)
T PF08367_consen 204 SDMESSIISSGHSYAMSRAS-----SYLSRSGALDELWSGL 239 (248)
T ss_dssp HHHHHHHHH-HHHHHHHHCC-----CTT-HHHHHHHHHHSH
T ss_pred HHHHHhhhhhHHHHHHHHHH-----hcCCHHHHHHHHHcCH
Confidence 777766654 7777665542 34455554433 3444
No 31
>PHA03081 putative metalloprotease; Provisional
Probab=97.93 E-value=0.00015 Score=77.70 Aligned_cols=185 Identities=16% Similarity=0.224 Sum_probs=110.8
Q ss_pred EEEEe-CCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeC-hhhHHHHHHHH
Q 001730 101 AAMCV-GMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIK-REFLKGALMRF 178 (1019)
Q Consensus 101 ~~l~~-~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~-~~~l~~~L~~l 178 (1019)
+.+.+ ..|.-.|-.+..|+||++||.+-. |. -.++ -.||+|++.+..|..... ......++.-+
T Consensus 20 iy~gi~~fgfe~di~~~lg~ahllehili~----fd----~~~f------~anast~r~ymsfwc~sirg~~y~DAvrtl 85 (595)
T PHA03081 20 IYLGISNFGFENDIGEILGIAHLLEHILIS----FD----SSKF------VANASTARSYMSFWCKSIRGRSYIDAIRTL 85 (595)
T ss_pred eEEeecccccccchHHHHhHHHHHHHHeee----cc----hHHh------cccchhhhhhHhHhhHhhcCCchHHHHHHH
Confidence 34433 567777778899999999999862 22 1222 358899999988887543 33355777777
Q ss_pred HhhccCCC-----CChhHHHHHHHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcchhhhhcCccHHHHH
Q 001730 179 SQFFISPL-----MKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQI 253 (1019)
Q Consensus 179 ~~~~~~P~-----~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l 253 (1019)
..||+.+. |+...++..+..+.+|+-- .+....+++.+.-+. +|.-|. +|-..-|.+- . ...+-|
T Consensus 86 iSWFF~~~~Lr~~F~~~~ik~~ikELENEYYF--RnEvfHCmDvLTfL~-gGDLYN---GGRi~ML~~l-~---~i~~~L 155 (595)
T PHA03081 86 ISWFFDNGKLKDNFSLSKIRNHIKELENEYYF--RNEVFHCMDVLTFLG-GGDLYN---GGRIDMLDNL-N---DVRDML 155 (595)
T ss_pred HHHhccCCccccccchhhHHHHHHHHhhhhhh--hhhhHHHHHHHHHhc-CCcccC---CchHHHHhhh-H---HHHHHH
Confidence 77777664 6666677677777777753 345566777776544 444552 2333333320 0 112222
Q ss_pred HHHHHhccCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCCCCccccccccccceEEEE
Q 001730 254 MKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRL 315 (1019)
Q Consensus 254 ~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (1019)
.+ .-+.....|.++++-- ++ +.+..++.+.||.+|..+...+. +.....+++++..
T Consensus 156 ~~-RM~~I~GpniVIFVk~-ln-~~~l~lL~~TFGtLP~~P~~Ip~---~~~~~i~gKiVMm 211 (595)
T PHA03081 156 SN-RMHRISGPNIVIFVKE-LN-PNTLSLLNNTFGTLPSCPETIPP---PILVSIGGKIVMM 211 (595)
T ss_pred HH-HHHhhcCCcEEEEEec-cC-HHHHHHHHHhcCCCCCCccccCC---CCccCcCCeEEEe
Confidence 22 2222345555555544 66 67888999999999987654332 1122225666553
No 32
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=94.57 E-value=0.28 Score=51.55 Aligned_cols=92 Identities=9% Similarity=0.047 Sum_probs=62.8
Q ss_pred eeEEEEEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeee----CC-----C--ceEEEEEe
Q 001730 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYT----ET-----E--HTCYHFEI 166 (1019)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t----~~-----~--~t~~~~~~ 166 (1019)
.+.+.+.|..+...+ ++.+=++-|..-+.-.||++++. .++...+..+-|.+++++ +. . +..+.+.+
T Consensus 91 I~Y~~l~fdl~~l~~-e~l~yl~Ll~~ll~~lgT~~~sy-~el~~~i~~~tGGis~~~~~~~~~~~~~~~~~~l~is~k~ 168 (248)
T PF08367_consen 91 IVYVRLYFDLSDLPE-EDLPYLPLLTDLLGELGTKNYSY-EELSNEIDLYTGGISFSIEVYTDYDDDDKYRPYLVISAKC 168 (248)
T ss_dssp EEEEEEEEE-TTS-C-CCHCCHHHHHHHCCCS-BSSS-H-HHHHHHHHHHSSEEEEEEEEEEEECTECCCEEEEEEEEEE
T ss_pred eEEEEEEecCCCCCH-HHHHhHHHHHHHHHhCCCCCCCH-HHHHHHHHHhCCCeEEEeeeccCCCCccceeEEEEEEEEe
Confidence 999999999986553 45666666666555599999997 689999887644333332 11 1 12444557
Q ss_pred ChhhHHHHHHHHHhhccCCCCChhH
Q 001730 167 KREFLKGALMRFSQFFISPLMKVEA 191 (1019)
Q Consensus 167 ~~~~l~~~L~~l~~~~~~P~~~~~~ 191 (1019)
..+.++.+++++.+++.+|.|+...
T Consensus 169 L~~~~~~~~~ll~eil~~~~f~d~~ 193 (248)
T PF08367_consen 169 LDEKLDEAFELLSEILTETDFDDKE 193 (248)
T ss_dssp EGGGHHHHHHHHHHHHHCB-TT-HH
T ss_pred HhhhHHHHHHHHHHHHhccCCCcHH
Confidence 8899999999999999999998875
No 33
>PF14812 PBP1_TM: Transmembrane domain of transglycosylase PBP1 at N-terminal; PDB: 3FWL_A 3VMA_A.
Probab=65.51 E-value=2 Score=35.17 Aligned_cols=14 Identities=57% Similarity=1.227 Sum_probs=0.0
Q ss_pred ccCccccccccccc
Q 001730 63 FDDEYEDDEYEDEE 76 (1019)
Q Consensus 63 ~~~~~~~~~~~~~~ 76 (1019)
.+|+|+||+|+|++
T Consensus 35 ~ddd~~DDD~dDde 48 (81)
T PF14812_consen 35 YDDDYEDDDDDDDE 48 (81)
T ss_dssp --------------
T ss_pred cccccccccccchh
Confidence 44555555554443
No 34
>PF09026 CENP-B_dimeris: Centromere protein B dimerisation domain; InterPro: IPR015115 Centromere protein B (CENP-B) interacts with centromeric heterochromatin in chromosomes and binds to a specific subset of alphoid satellite DNA, called the CENP-B box. CENP-B may organise arrays of centromere satellite DNA into a higher order structure, which then directs centromere formation and kinetochore assembly in mammalian chromosomes. The CENP-B dimerisation domain is composed of two alpha-helices, which are folded into an antiparallel configuration. Dimerisation of CENP-B is mediated by this domain, in which monomers dimerise to form a symmetrical, antiparallel, four-helix bundle structure with a large hydrophobic patch in which 23 residues of one monomer form van der Waals contacts with the other monomer. This CENP-B dimer configuration may be suitable for capturing two distant CENP-B boxes during centromeric heterochromatin formation []. ; GO: 0003677 DNA binding, 0003682 chromatin binding, 0006355 regulation of transcription, DNA-dependent, 0000775 chromosome, centromeric region, 0005634 nucleus; PDB: 1UFI_A.
Probab=60.48 E-value=2.8 Score=35.07 Aligned_cols=8 Identities=0% Similarity=0.119 Sum_probs=3.5
Q ss_pred chHHHHHh
Q 001730 119 LAHFLEHM 126 (1019)
Q Consensus 119 lahlleh~ 126 (1019)
+++..++|
T Consensus 46 fgea~~~~ 53 (101)
T PF09026_consen 46 FGEAMAYF 53 (101)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhc
Confidence 44444443
No 35
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=50.03 E-value=26 Score=23.06 Aligned_cols=16 Identities=19% Similarity=0.524 Sum_probs=14.1
Q ss_pred hCCCHHHHHHHHHHHH
Q 001730 899 EGLDDESFENYRSGLM 914 (1019)
Q Consensus 899 ~~ise~el~~~k~~l~ 914 (1019)
+.||++||++.|..++
T Consensus 15 G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 15 GEISEEEYEQKKARLL 30 (31)
T ss_pred CCCCHHHHHHHHHHHh
Confidence 5699999999998875
No 36
>PF09186 DUF1949: Domain of unknown function (DUF1949); InterPro: IPR015269 Members of this entry are a set of functionally uncharacterised hypothetical bacterial proteins. They adopt a ferredoxin-like fold, with a beta-alpha-beta-beta-alpha-beta arrangement []. This entry contains the protein Impact, which is a translational regulator that ensures constant high levels of translation under amino acid starvation. It acts by interacting with Gcn1/Gcn1L1, thereby preventing activation of Gcn2 protein kinases (EIF2AK1 to 4) and subsequent down-regulation of protein synthesis. It is evolutionary conserved from eukaryotes to archaea []. ; PDB: 2CVE_A 1VI7_A.
Probab=38.43 E-value=92 Score=23.42 Aligned_cols=50 Identities=8% Similarity=0.130 Sum_probs=42.4
Q ss_pred CCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHHHHhhc
Q 001730 133 EFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFF 182 (1019)
Q Consensus 133 ~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~l~~~~ 182 (1019)
.|+.-+.+..+++.+|+.+--....+.-.+.+.++.+..+...+.+.++.
T Consensus 4 ~Y~~~~~v~~~l~~~~~~i~~~~y~~~V~~~v~v~~~~~~~f~~~l~~~t 53 (56)
T PF09186_consen 4 DYSQYGKVERLLEQNGIEIVDEDYTDDVTLTVAVPEEEVEEFKAQLTDLT 53 (56)
T ss_dssp -CCCHHHHHHHHHHTTTEEEEEEECTTEEEEEEEECCCHHHHHHHHHHHT
T ss_pred chhhHHHHHHHHHHCCCEEEcceecceEEEEEEECHHHHHHHHHHHHHHc
Confidence 35666789999999999988888888899999999999999998888764
No 37
>PF14812 PBP1_TM: Transmembrane domain of transglycosylase PBP1 at N-terminal; PDB: 3FWL_A 3VMA_A.
Probab=31.86 E-value=15 Score=30.22 Aligned_cols=15 Identities=47% Similarity=1.015 Sum_probs=0.0
Q ss_pred ccccccccccccccc
Q 001730 66 EYEDDEYEDEEEDDE 80 (1019)
Q Consensus 66 ~~~~~~~~~~~~~~~ 80 (1019)
+|+||.++|..++++
T Consensus 34 D~ddd~~DDD~dDde 48 (81)
T PF14812_consen 34 DYDDDYEDDDDDDDE 48 (81)
T ss_dssp ---------------
T ss_pred ccccccccccccchh
Confidence 344444444444434
No 38
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=29.17 E-value=26 Score=42.02 Aligned_cols=8 Identities=25% Similarity=0.177 Sum_probs=2.9
Q ss_pred CCchHHHH
Q 001730 117 QGLAHFLE 124 (1019)
Q Consensus 117 ~Glahlle 124 (1019)
+|=..|.+
T Consensus 1466 ~~D~df~~ 1473 (1516)
T KOG1832|consen 1466 LIDGDFME 1473 (1516)
T ss_pred CCChHHHH
Confidence 33333333
No 39
>PRK11512 DNA-binding transcriptional repressor MarR; Provisional
Probab=27.90 E-value=1.9e+02 Score=27.21 Aligned_cols=67 Identities=15% Similarity=0.078 Sum_probs=40.6
Q ss_pred cHHHHHHhcCccccccccccCCCCCCcccceEEEEEEEeChhhhhcHHHHHHHHHHHHHHHHHcCCchHHHHHHhhhc
Q 001730 356 SLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIG 433 (1019)
Q Consensus 356 ~L~~~Lr~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~v~~~i~~~l~~l~~~~~~~~~l~~~k~~~ 433 (1019)
++.+.|.++||+....... +.. .. .+.+|++|.+-.+++...+.+.+..-.-.++++++++.....+
T Consensus 73 r~l~~Le~~GlI~R~~~~~-----DrR----~~--~l~LT~~G~~~~~~~~~~~~~~~~~~l~~~ls~ee~~~l~~~L 139 (144)
T PRK11512 73 RMLDRLVCKGWVERLPNPN-----DKR----GV--LVKLTTSGAAICEQCHQLVGQDLHQELTKNLTADEVATLEHLL 139 (144)
T ss_pred HHHHHHHHCCCEEeccCcc-----cCC----ee--EeEEChhHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHH
Confidence 4666777999998653321 222 33 3466888876566655555433333234689999888876543
No 40
>cd08317 Death_ank Death domain associated with Ankyrins. Death Domain (DD) associated with Ankyrins. Ankyrins are modular proteins comprising three conserved domains, an N-terminal membrane-binding domain containing ANK repeats, a spectrin-binding domain and a C-terminal DD. Ankyrins function as adaptor proteins and they interact, through ANK repeats, with structurally diverse membrane proteins, including ion channels/pumps, calcium release channels, and cell adhesion molecules. They play critical roles in the proper expression and membrane localization of these proteins. In mammals, this family includes ankyrin-R for restricted (or ANK1), ankyrin-B for broadly expressed (or ANK2) and ankyrin-G for general or giant (or ANK3). They are expressed in different combinations in many tissues and play non-overlapping functions. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-associati
Probab=25.36 E-value=4e+02 Score=22.26 Aligned_cols=74 Identities=14% Similarity=0.197 Sum_probs=49.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCCCCHHHHHH-H--HHHHHhcCCCCCCchHHHHHHHhcCC
Q 001730 880 PIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESN-R--FWNQITDKRYMFDQSQKEAEDLKSIK 956 (1019)
Q Consensus 880 ~~~~~~~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~~~~~s~~~~~~-~--~~~~i~~~~~~~~~~~~~~~~i~~vt 956 (1019)
...+.+.|-.-+.++...+ ++++.+++.++..- +.+..+.+. . .|..-. + .--.....+++|..+.
T Consensus 7 l~~ia~~lG~dW~~LAr~L-g~~~~dI~~i~~~~-------~~~~~eq~~~mL~~W~~r~--g-~~at~~~L~~AL~~i~ 75 (84)
T cd08317 7 LADISNLLGSDWPQLAREL-GVSETDIDLIKAEN-------PNSLAQQAQAMLKLWLERE--G-KKATGNSLEKALKKIG 75 (84)
T ss_pred HHHHHHHHhhHHHHHHHHc-CCCHHHHHHHHHHC-------CCCHHHHHHHHHHHHHHhc--C-CcchHHHHHHHHHHcC
Confidence 4567778888888888765 79999998876521 223323332 2 244432 2 2345678899999999
Q ss_pred HHHHHHHH
Q 001730 957 KNDVISWY 964 (1019)
Q Consensus 957 ~edv~~~~ 964 (1019)
+.||.+-+
T Consensus 76 r~Di~~~~ 83 (84)
T cd08317 76 RDDIVEKC 83 (84)
T ss_pred hHHHHHHh
Confidence 99997653
No 41
>PF05120 GvpG: Gas vesicle protein G ; InterPro: IPR007804 Gas vesicles are intracellular, protein-coated, and hollow organelles found in cyanobacteria and halophilic archaea. They are permeable to ambient gases by diffusion and provide buoyancy, enabling cells to move upwards in water to access oxygen and/or light. Proteins containing this family are involved in the formation of gas vesicles [].
Probab=22.81 E-value=2.4e+02 Score=23.42 Aligned_cols=39 Identities=21% Similarity=0.490 Sum_probs=27.0
Q ss_pred CChhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHc
Q 001730 878 YNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLL 918 (1019)
Q Consensus 878 ~~~~~~~~~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~ 918 (1019)
++|..+...+.+.-..+. .+.||+++|++...-++..+.
T Consensus 28 ~Dp~~i~~~L~~L~~~~e--~GEIseeEf~~~E~eLL~rL~ 66 (79)
T PF05120_consen 28 YDPAAIRRELAELQEALE--AGEISEEEFERREDELLDRLE 66 (79)
T ss_pred cCHHHHHHHHHHHHHHHH--cCCCCHHHHHHHHHHHHHHHH
Confidence 456655555444433332 278999999999999998876
No 42
>PRK03573 transcriptional regulator SlyA; Provisional
Probab=22.68 E-value=2.6e+02 Score=26.17 Aligned_cols=66 Identities=12% Similarity=0.072 Sum_probs=42.9
Q ss_pred cHHHHHHhcCccccccccccCCCCCCcccceEEEEEEEeChhhhhcHHHHHHHHHHHHHHHHHcCCchHHHHHHhhhc
Q 001730 356 SLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIG 433 (1019)
Q Consensus 356 ~L~~~Lr~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~v~~~i~~~l~~l~~~~~~~~~l~~~k~~~ 433 (1019)
++...|.++||+....... +.. . ..+.+|++|.+-..++.....+....+ -.++++++++.....+
T Consensus 65 ~~v~~Le~~GlV~r~~~~~-----DrR----~--~~l~LT~~G~~~~~~~~~~~~~~~~~~-~~~l~~ee~~~l~~~l 130 (144)
T PRK03573 65 RTLDQLEEKGLISRQTCAS-----DRR----A--KRIKLTEKAEPLISEVEAVINKTRAEI-LHGISAEEIEQLITLI 130 (144)
T ss_pred HHHHHHHHCCCEeeecCCC-----CcC----e--eeeEEChHHHHHHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHH
Confidence 3556777899997653311 122 2 445668899776777666666555555 4689999888876543
Done!