Query 001730
Match_columns 1019
No_of_seqs 267 out of 3198
Neff 9.7
Searched_HMMs 29240
Date Tue Mar 26 16:35:46 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001730.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1027-1031//hhsearch_pdb/001730hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cww_A Insulysin, insulin-degr 1.0 1 1 980.6 110.6 943 4-1019 15-980 (990)
2 1q2l_A Protease III; hydrolase 1.0 1 1 979.9 104.6 925 10-1018 7-937 (939)
3 2fge_A Atprep2;, zinc metallop 1.0 1 1 713.4 54.5 860 13-992 27-981 (995)
4 3s5m_A Falcilysin; M16 metallo 1.0 1 1 673.8 49.5 873 16-994 79-1181(1193)
5 3eoq_A Putative zinc protease; 1.0 1 1 454.1 36.6 400 24-499 2-404 (406)
6 3ami_A Zinc peptidase; alpha/b 1.0 1 1 452.5 41.1 412 22-500 5-423 (445)
7 3hdi_A Processing protease; CA 1.0 1 1 435.9 38.0 402 23-500 1-405 (421)
8 1pp9_A Ubiquinol-cytochrome C 1.0 1 1 423.8 38.6 412 17-500 7-429 (446)
9 1hr6_B Beta-MPP, mitochondrial 1.0 1 1 414.7 38.3 408 22-499 5-428 (443)
10 1hr6_A Alpha-MPP, mitochondria 1.0 1 1 407.5 36.5 403 21-499 3-437 (475)
No 1
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ...
Probab=1.00 E-value=1 Score=980.59 Aligned_cols=943 Identities=36% Similarity=0.624 Sum_probs=819.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99744468863369686456217893689889999679999787754335897655334467456653355433444401
Q 001730 4 NGCVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDT 83 (1019)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1019)
+.++-.....|+||+.|.+.|+.++|+|||+|++++++.. +
T Consensus 15 ~~~~~~~~~~~~~~~~d~~~~~~~~L~NGl~v~~~~~~~~--------------~------------------------- 55 (990)
T 3cww_A 15 NPAIKRIGNHITKSPEDKREYRGLELANGIKVLLISDPTT--------------D------------------------- 55 (990)
T ss_dssp CTTEEEECSCCCCCTTCCCEEEEEEETTCCEEEEEECTTC--------------S-------------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCC--------------C-------------------------
T ss_conf 8351035776657988875559999479988999978899--------------8-------------------------
Q ss_pred HHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEE
Q ss_conf 12101456555444258999927778889999998349998760059767999007999999549961056479925999
Q 001730 84 EKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYH 163 (1019)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahllehllf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~d~t~~~ 163 (1019)
.+.++++|++|+++||.+.+|+||++|||+|+||++||.+++|.++++.+||.+||+|+.|+|+|+
T Consensus 56 --------------~~~~~l~v~~Gs~~ep~~~~GlAH~lEHmlf~GT~~~p~~~~~~~~l~~~Gg~~NA~T~~d~T~y~ 121 (990)
T 3cww_A 56 --------------KSSAALDVHIGSLSDPPNIAGLSHFLQHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYY 121 (990)
T ss_dssp --------------EEEEEEEESCCGGGSCTTSTTHHHHHHHHGGGCBSSSCSTTHHHHHHHTTTCEEEEEECSSCEEEE
T ss_pred --------------CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEE
T ss_conf --------------178999955258779999997399999988068877998056999999769950689889845999
Q ss_pred EEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHH-H
Q ss_conf 982922299999999961007899925799999899999985019979999999983089999998677675330000-4
Q 001730 164 FEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIG-A 242 (1019)
Q Consensus 164 ~~~~~~~l~~~L~~l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~-~ 242 (1019)
+++++++|+.+|+++++++.+|.|+++++++|+.+|.+|++...+++.+++++.+..+++++|||+++++|+.++|.. +
T Consensus 122 ~~~~~~~l~~~l~~~~d~~~~p~f~~~~~~~E~~~V~~E~~~~~~~~~~~~~~~~~~~~~~~~py~~~~~G~~~~l~~~~ 201 (990)
T 3cww_A 122 FDVSHEHLEGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRP 201 (990)
T ss_dssp EEEEGGGHHHHHHHHHGGGTCBCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTSCTTSGGGCCCSCCHHHHTHHH
T ss_pred EEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 99378999999999999985758998999999999999998553883999999999856899996347889899984020
Q ss_pred HHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCEEEEEEECC
Q ss_conf 205912899999999820687870999984999999999999870244589888987654543344---44089998636
Q 001730 243 MEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWK---ACKLFRLEAVK 319 (1019)
Q Consensus 243 ~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 319 (1019)
..++..++++|++||++||+|+||+|+++||+++++++++++++|+.|+++..+.+.+ +.++.. .+..+...+..
T Consensus 202 ~~~~~~~~~~l~~f~~~~Y~p~n~~l~v~Gd~~~~~~~~~i~~~f~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 279 (990)
T 3cww_A 202 NQEGIDVRQELLKFHSAYYSSNLMAVVVLGRESLDDLTNLVVKLFSEVENKNVPLPEF--PEHPFQEEHLKQLYKIVPIK 279 (990)
T ss_dssp HHTTCCHHHHHHHHHHHHCCGGGEEEEEEESSCHHHHHHHHHHHHTTSCCCCCCCCCC--CSCSSCGGGSSEEEEECCSS
T ss_pred CCCCCHHHHHHHHHHHHHCCHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC--CCCCCCHHHCCEEEEEEECC
T ss_conf 1046529999999999717786638999869999999999999713786578889988--88999967807699999878
Q ss_pred CCCEEEEEEECCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHH
Q ss_conf 65369999964897133203919999998448999808999985686340001116777887653018999999191224
Q 001730 320 DVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGL 399 (1019)
Q Consensus 320 ~~~~i~i~~~~~~~~~~~~~~~~~~l~~iL~~~~~~~L~~~Lr~~gl~y~i~~~~~~~~~~~~~~~g~~~i~~~~~~~g~ 399 (1019)
++..+.++|++|...+.++..++.+++++||+++.++|+..||++||+|+++++......+ .|.|.|++.+++.|.
T Consensus 280 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~lLg~~~~~sl~~~Lr~~g~~~~~~a~~~~~~~~----~~~f~i~~~~~~~g~ 355 (990)
T 3cww_A 280 DIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQKAGARG----FMFFIINVDLTEEGL 355 (990)
T ss_dssp SCCEEEEEEEECCCGGGTTTCHHHHHHHHHTCCSTTCHHHHHHHTTSCSCEEEEEEEEETT----EEEEEEEEECCHHHH
T ss_pred CCCEEEEEEECCCHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCCCCC----CCEEEEEEEECHHHH
T ss_conf 7748999997688056555588999999956999994899998779711256535667788----517999999884776
Q ss_pred HCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 10999999999999999972991489999965002322135689907999999985468995442223533657979999
Q 001730 400 EKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMI 479 (1019)
Q Consensus 400 ~~~~~v~~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~e~i 479 (1019)
++++++++.++++++.+++.|++++++++++.....++.+....++...+..++..+...++.+++.....+.++|+++|
T Consensus 356 ~~~~~~~~~i~~~l~~l~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~t~~~i 435 (990)
T 3cww_A 356 LHVEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLI 435 (990)
T ss_dssp HTHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTTSCGGGTTTTTTCCCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCHHHH
T ss_conf 54999999999999999857983899999999999736667769979999999999862799997326224531899999
Q ss_pred HHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
Q ss_conf 99984049576199998179778877620221212000113893689842499999987679999989998830001577
Q 001730 480 KHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDI 559 (1019)
Q Consensus 480 ~~~~~~l~~~~~~i~i~~p~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~lP~~n~~ip~~~~l~~~~~ 559 (1019)
+++++.+.+++.++++++|.+ .......++||+++|.+..++.+.++.|..... ...+.+|+.|+|+|+++.+.+...
T Consensus 436 ~~~~~~l~~~~~~~~~~~p~~-~~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~ip~~~~~~~~~~ 513 (990)
T 3cww_A 436 EMVLDKLRPENVRVAIVSKSF-EGKTDRTEEWYGTQYKQEAIPDAVIAKWQNAAL-NGKFKLPTKNEFIPTNFEILPLEA 513 (990)
T ss_dssp HHHHTTCSGGGCEEEEECGGG-TTCCCEECTTTCCEEEEEECCHHHHHHHHTCCC-CTTCCCCCCCTTCCCCCCCCCCCT
T ss_pred HHHHHHCCHHHEEEEEECCCC-CCCCCCCCCEECCEEEEECCCHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999984697677999973777-777673331637621562389999997645788-745569998877886650045777
Q ss_pred CCCCCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 88977789994863169826897237977897179999997179877999999999999999999978857653327289
Q 001730 560 SNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLET 639 (1019)
Q Consensus 560 ~~~~~~~~~P~~i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~ 639 (1019)
.. ...|..+...+|++||++++++|++|++.+++.+.++....+++..++..|++.++...+++..+.+.++|+++
T Consensus 514 ~~----~~~p~~~~~~ng~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~L~~~ll~~~~~~~~~~~~l~G~~~ 589 (990)
T 3cww_A 514 AA----TPYPALIKDTAMSKLWFKQDDKFFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSY 589 (990)
T ss_dssp TC----CSSCEEEEECSSEEEEEEECSSCCCSEEEEEEEEECGGGTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred CC----CCCCEEEECCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 88----89995654388716755168765788689999996897779999999999999999999878644898687489
Q ss_pred EEEEECCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 998717616999960499889999999999840799988999999999999982213-9145899999985137999998
Q 001730 640 SVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVD 718 (1019)
Q Consensus 640 ~~~~~~~gl~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~-~p~~~a~~~~~~ll~~~~~~~~ 718 (1019)
+++++.+++.++++|++++++.+++++.+.+.+|.|++++|+++|++++..+++... +|+..+...+..+++++.|...
T Consensus 590 ~~~~~~~~~~~~~~g~~~~l~~~l~ll~~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~~p~~~a~~~~~~~l~~~~~~~~ 669 (990)
T 3cww_A 590 DLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEARFEIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKD 669 (990)
T ss_dssp EEEEETTEEEEEEEEESTTHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHBSSCCCHH
T ss_pred EEEECCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHH
T ss_conf 99976875999998421868999999999986589899999999999999988666248599999999999678999999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHH---HHHHHHHCCC-CCCCCCCCCCEEEECCCCCEEE
Q ss_conf 99987315999999999999985011588873389999999999---9999461589-9982122453158779997289
Q 001730 719 EKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHIS---NIFKSIFSVQ-PLPIEMRHQECVICLPSGANLV 794 (1019)
Q Consensus 719 ~~~~~l~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 794 (1019)
+..+.|+.++++++.+|+++++.+.+++++|+||++.+++..++ ..+++.++.. +.+....+..+....+.+....
T Consensus 670 ~~~~~l~~lt~~~l~~~~~~~~~~~~~~~~v~Gn~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (990)
T 3cww_A 670 ELKEALADVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLAAYREVQLPDRGWFV 749 (990)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHEEEEEEEEEESCCHHHHHHHHHHHHHHHHHHHCCEECCGGGCCCCCBBCCCTTEEEE
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEECCCCCEEE
T ss_conf 99998852999999999999986411899997588999999999999999834677788743331335448838998699
Q ss_pred EEECCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEEE
Q ss_conf 97324687886642688999722356856189999999999985134368742011232699933345378336999996
Q 001730 795 RNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQ 874 (1019)
Q Consensus 795 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~lss~lf~~LR~~~~LgY~v~s~~~~~~~~~~~~~~v~ 874 (1019)
+. ...+..+++++. ++++. +..+.++.+++.+|+++|++++|++||+++||||+|+|++....+..++.+.+|
T Consensus 750 ~~--~~~~~~~~~~v~-~~~~~----~~~~~~~~~~l~ll~~il~~~lf~~LRek~~lgY~v~s~~~~~~g~~~~~~~vq 822 (990)
T 3cww_A 750 YQ--QRNEVHNNSGIE-IYYQT----DMQSTSENMFLELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQ 822 (990)
T ss_dssp EE--EECSSCSSEEEE-EEEEE----EECCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSEEEEEEEEETTEEEEEEEEE
T ss_pred EE--ECCCCCCCCEEE-EEEEC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEEE
T ss_conf 97--068888883799-99967----999999999999999998889999987112775799888786389788999993
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC
Q ss_conf 89999567999999999999999707998999999999999870899997899999999984288888840899999915
Q 001730 875 SSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKS 954 (1019)
Q Consensus 875 s~~~~~~~l~~~i~~~l~~~~~~~~~ise~el~~~K~~li~~~~~~~~s~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~ 954 (1019)
|+ ++|+.+.++++.|++.+...+.++|++||+++|.++++++...+.++..++.++|..+..+.+.++.++++++.|++
T Consensus 823 s~-~dp~~~~~~i~~f~~~~~~l~~~~te~el~~~k~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~~~~~i~~ 901 (990)
T 3cww_A 823 SE-KPPHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNTEVAYLKT 901 (990)
T ss_dssp ES-SCHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCCCSSHHHHHHHHHHHHHTTCCCTTHHHHHHHHHTT
T ss_pred CC-CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 79-99999999999999999999985699999999999999851799889999999999997489887767999999982
Q ss_pred CCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCC----------HHH----CCCCCCCEECCHHHHHHCCCCCCCCC
Q ss_conf 999999999998613489985579999944888941----------000----02567513069488860384233689
Q 001730 955 IKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIK----------ESE----KHSKSALVIKDLTAFKLSSEFYQSLC 1019 (1019)
Q Consensus 955 iT~edv~~~~~~~l~~~~~~~~~~~~~v~G~~~~~~----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 1019 (1019)
||++||++++++++.+.++.+++++++|+|+..... ++. ...+++..|.||.+||+++|+||..|
T Consensus 902 vT~~di~~~a~~~l~~~~~~~~~~~v~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 980 (990)
T 3cww_A 902 LTKADIIKFYKEMLAVDAPRRHKVSVHVLAREMDSNPVVGEFPAQNDINLSQAPALPQPEVIQNMTAFKRGLPLFPLVK 980 (990)
T ss_dssp CCHHHHHHHHHHHTSTTCTTCEEEEEEEECTTC----------------CCCCCCCCCCEECSCHHHHHHTSCBCCCCC
T ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCHHHHHHCCCCCCCCC
T ss_conf 8999999999998603688777799999777875333322222201222101224788707168999952586534677
No 2
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Probab=1.00 E-value=1 Score=979.89 Aligned_cols=925 Identities=24% Similarity=0.399 Sum_probs=806.5
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 68863369686456217893689889999679999787754335897655334467456653355433444401121014
Q 001730 10 SDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKG 89 (1019)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (1019)
..+.|+||+.|.+.|+.++|+|||+|++++++.. +
T Consensus 7 ~~~~~~~~~~d~~~~~~~~L~NGl~v~~~~~~~~--------------~------------------------------- 41 (939)
T 1q2l_A 7 IQETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQA--------------V------------------------------- 41 (939)
T ss_dssp CCSCCCCCTTCCCEEEEEEETTSCEEEEEECTTC--------------S-------------------------------
T ss_pred CCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCC--------------C-------------------------------
T ss_conf 5566727988886548999369998999978898--------------8-------------------------------
Q ss_pred CCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHH
Q ss_conf 56555444258999927778889999998349998760059767999007999999549961056479925999982922
Q 001730 90 KGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKRE 169 (1019)
Q Consensus 90 ~~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahllehllf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~d~t~~~~~~~~~ 169 (1019)
.+++++++++|+++||.+.+|+||++|||+|+||++||..+++.++++.+||.+||+|+.|+|+|+++++++
T Consensus 42 --------~~~~~l~v~~Gs~~e~~~~~GlAH~lEHmlf~Gt~~~p~~~~~~~~l~~~Gg~~NA~T~~d~T~y~~~~~~~ 113 (939)
T 1q2l_A 42 --------KSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFYLEVEND 113 (939)
T ss_dssp --------SEEEEEEESCCGGGCCGGGTTHHHHHHHHTTSCBSSSCSTTHHHHHHHTTTCEEEEEECSSCEEEEEEECGG
T ss_pred --------CEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHH
T ss_conf --------168999967258889999985699999878068887999365999999769951579889867999994789
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHCCCCH
Q ss_conf 29999999996100789992579999989999998501997999999998308999999867767533000042059128
Q 001730 170 FLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINL 249 (1019)
Q Consensus 170 ~l~~~L~~l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~ 249 (1019)
+|+.+|+++++++.+|.|+++++++|+++|.+|++...+++.+++.+.+..++|++|||+++++|+.++|.+ ..+.++
T Consensus 114 ~l~~~L~~l~d~~~~p~f~~~~~~~Er~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~--~~~~~~ 191 (939)
T 1q2l_A 114 ALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSD--KPGNPV 191 (939)
T ss_dssp GHHHHHHHHHHHHHCBCCCSTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHSSCTTSGGGSCCSCCHHHHSC--BTTBCH
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHC--CCCCHH
T ss_conf 999999999999857799989999999999999985649879999999997568999976678899999716--788459
Q ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCEEEEEEECCCCCEEEE
Q ss_conf 99999999820687870999984999999999999870244589888987654543344---440899986366536999
Q 001730 250 QEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWK---ACKLFRLEAVKDVHILDL 326 (1019)
Q Consensus 250 ~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~i 326 (1019)
+++|++||++||+|+||+|+|+||+++++++++++++|+.||++..+.+.+. .+++. .+..+...+..++..+.+
T Consensus 192 ~~~l~~f~~~~Y~p~n~~l~v~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~i 269 (939)
T 1q2l_A 192 QQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEIT--VPVVTDAQKGIIIHYVPALPRKVLRV 269 (939)
T ss_dssp HHHHHHHHHHHCCTTTCEEEEEESSCHHHHHHHHHHTGGGSCCCCCCCCCCC--SCSCCGGGSSEEEEECCSSCCCEEEE
T ss_pred HHHHHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCHHHCCEEEEEEECCCCCEEEE
T ss_conf 9999999996158735699997499999999999998643335887899788--89999789477999982787718999
Q ss_pred EEECCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHCHHHHH
Q ss_conf 99648971332039199999984489998089999856863400011167778876530189999991912241099999
Q 001730 327 TWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDII 406 (1019)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~iL~~~~~~~L~~~Lr~~gl~y~i~~~~~~~~~~~~~~~g~~~i~~~~~~~g~~~~~~v~ 406 (1019)
+|++|...+.++..++.+++++||+++.|+|+..||++||+|+++++..... ..+.|.|.|++.+++.|.+++++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~l~~lLg~~~~s~L~~~L~~~gl~~~~~a~~~~~~---~~~~g~f~i~~~~~~~~~~~~~~~~ 346 (939)
T 1q2l_A 270 EFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIV---NGNSGVLAISASLTDKGLANRDQVV 346 (939)
T ss_dssp EEEEECCGGGGGGCHHHHHHHHHHCCCTTSHHHHHHHTTCEEEEEEEEESST---TSSEEEEEEEEEECHHHHHTHHHHH
T ss_pred EEECCCHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHCCCCHHEEECCCCCC---CCCCEEEEEEEEECHHHHHHHHHHH
T ss_conf 9976872776654789999999568998719999987697121243345556---8885189999998946665299999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 99999999999729914899999650023221356899079999999854689954422235336579799999998404
Q 001730 407 GFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFF 486 (1019)
Q Consensus 407 ~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~e~i~~~~~~l 486 (1019)
+.++++++.+++.|+++++++++|+....++.+....++...+..++..+..+++++++.....++++|+++|+++++++
T Consensus 347 ~~i~~~l~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~vt~~~i~~~~~~l 426 (939)
T 1q2l_A 347 AAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMM 426 (939)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHTTSCGGGTTTTTTCCCCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCHHHHHHHHHHC
T ss_conf 99999999998679859999999999872203457788599999999986508999971172213106999999999846
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
Q ss_conf 95761999981797788776202212120001138936898424999999876799999899988300015778897778
Q 001730 487 MPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTV 566 (1019)
Q Consensus 487 ~~~~~~i~i~~p~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~lP~~n~~ip~~~~l~~~~~~~~~~~~ 566 (1019)
.++++++++++|. ...+..++||+++|.+..++.+.++.|....+ ...+.+|.+|+|+|.++.+..... ..
T Consensus 427 ~~~~~~~~~~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~n~~~~~~~~~~~~~~-----~~ 497 (939)
T 1q2l_A 427 TPQNARIWYISPK---EPHNKTAYFVDAPYQVDKISAQTFADWQKKAA-DIALSLPELNPYIPDDFSLIKSEK-----KY 497 (939)
T ss_dssp SGGGCEEEEECTT---CCCCEECTTTCCEEEEEECCHHHHHHHHHHHH-TCCCCCCCCCTTCCCCCCCCCCSS-----CC
T ss_pred CHHHCEEEEECCC---CCCCCCCCEECCEEEEEECCHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCC-----CC
T ss_conf 9877489998278---88773345437742563089999998754686-535669997767886753056767-----89
Q ss_pred CCCEEEECCCCCEEEEECCCCCCCC-EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 9994863169826897237977897-179999997179877999999999999999999978857653327289998717
Q 001730 567 TSPTCIIDEPLIRFWYKLDNTFKLP-RANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFS 645 (1019)
Q Consensus 567 ~~P~~i~~~~g~~v~~~~~~~f~~P-~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 645 (1019)
..|..+..++|++||+++++.|++| ++.+++.+.++....++++.++..|++.++...+.++.+.+.++|++++++. .
T Consensus 498 ~~p~~~~l~ng~~v~~~~~~~f~~pp~~~i~l~~~~~~~~~~~~~~~~~~l~~~ll~~g~~~~~~~~~l~G~~~~~~~-~ 576 (939)
T 1q2l_A 498 DHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNA-N 576 (939)
T ss_dssp SSCEEEEEETTEEEEEECCSSCTTSSEEEEEEEEECGGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-S
T ss_pred CCCEEEEECCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE-C
T ss_conf 999799977981685557875589986799999958965589999999999999999999987527997694899960-8
Q ss_pred CEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 616999960499889999999999840799988999999999999982213-9145899999985137999998999873
Q 001730 646 DKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEKLSIL 724 (1019)
Q Consensus 646 ~gl~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~-~p~~~a~~~~~~ll~~~~~~~~~~~~~l 724 (1019)
+|+.++++|++++++.+++++.+.+.+|.|++++|+++|++++..+++... +|...+...+..+++.+.++..+..+.|
T Consensus 577 ~g~~~~~~g~~~~l~~~l~ll~~~l~~p~~~~~~f~~~k~~~~~~l~~~~~~~p~~~a~~~l~~~l~~~~~~~~~~~~~l 656 (939)
T 1q2l_A 577 NGLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKIL 656 (939)
T ss_dssp SEEEEEEEEESSSHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHTTSSSCCCHHHHHHHG
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 95799997656769999999999974789899999999999999976342068399999999999668999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCC
Q ss_conf 15999999999999985011588873389999999999999946158999821224531587799972899732468788
Q 001730 725 HGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCE 804 (1019)
Q Consensus 725 ~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1019)
++++++++++|+++++.+.+++++|+||++.++++.+++.+++.++..+.+ ....+....+.+....+. ...+ .
T Consensus 657 ~~it~~~l~~f~~~~~~~~~~~~~vvGn~~~~~~~~l~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~-~ 730 (939)
T 1q2l_A 657 PSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSE---WCRNKDVVVDKKQSVIFE--KAGN-S 730 (939)
T ss_dssp GGCCHHHHHHHHHHHHTTCEEEEEEEESCCHHHHHHHHHHHHHHHTCCCSC---CCCCEEECCCSCEEEEEE--ECCS-S
T ss_pred HCCCHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCC---CCCCCEEEECCCCEEEEE--CCCC-C
T ss_conf 518999999999999864208999975989999999999999997368865---554535870799548996--6899-9
Q ss_pred CCCEE-EEEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEEECCCCCHHHH
Q ss_conf 66426-88999722356856189999999999985134368742011232699933345378336999996899995679
Q 001730 805 TNSVI-EVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYL 883 (1019)
Q Consensus 805 ~~~~v-~~~~~~~~~~~~~~~~~~~~~~~ll~~~lss~lf~~LR~~~~LgY~v~s~~~~~~~~~~~~~~v~s~~~~~~~l 883 (1019)
.++++ . ++++. +..+.+..+++.+|+++++++||++||+++||||+|+|+.....+..|+.|.+|++..+++.+
T Consensus 731 ~~~~~~~-~~~~~----~~~~~~~~~~~~lL~~~~~s~lf~~LRek~gl~Y~v~s~~~~~~~~~g~~~~i~s~~~~p~~~ 805 (939)
T 1q2l_A 731 TDSALAA-VFVPT----GYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFL 805 (939)
T ss_dssp SCEEEEE-EEECS----SCCHHHHHHHHHHHHHHHHHHHTHHHHTSCCSSSCEEEEEEEETTEEEEEEEEEESSSCHHHH
T ss_pred CCCEEEE-EEEEC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEEEECCCCCHHHH
T ss_conf 8742699-99966----999999999999999998888899999998747155346765397568999998799998999
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHH
Q ss_conf 99999999999999707998999999999999870899997899999999984288888840899999915999999999
Q 001730 884 QERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISW 963 (1019)
Q Consensus 884 ~~~i~~~l~~~~~~~~~ise~el~~~K~~li~~~~~~~~s~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~iT~edv~~~ 963 (1019)
.++++.|++.+...+.++|++||+++|+++++++.....++...++++|..+..+.+.+++.+++++.|++||++||+++
T Consensus 806 ~~~i~~~~~~~~~~~~~~t~~el~~~k~~l~~~~~~~~~s~~~~~~~~w~~i~~~~~~~d~~~~~~~~i~~vT~~dv~~~ 885 (939)
T 1q2l_A 806 WERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADF 885 (939)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH
T ss_conf 99999999999999986899999999999999861799989999999999985389887868999999860899999999
Q ss_pred HHHHCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCEECCHHHHHHCCCCCCCC
Q ss_conf 9986134899855799999448889410000256751306948886038423368
Q 001730 964 YKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSL 1018 (1019)
Q Consensus 964 ~~~~l~~~~~~~~~~~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1019)
+++|+. .+.+.+++++|+|+.....+++.. +++..|.+|.+||+++|+||.+
T Consensus 886 a~~~l~--~~~~~~l~v~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 937 (939)
T 1q2l_A 886 FHQAVV--EPQGMAILSQISGSQNGKAEYVHP-EGWKVWENVSALQQTMPLMSEK 937 (939)
T ss_dssp HHHHTT--SCSSEEEEEEECCSSHHHHCCCCC-TTCEECSCHHHHHTTSCEEECC
T ss_pred HHHHHC--CCCCCEEEEEEECCCCCCCCCCCC-CCCCEECCHHHHHHCCCCCCCC
T ss_conf 999844--777777999996678875310146-7770707899984347665314
No 3
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Probab=1.00 E-value=1 Score=713.44 Aligned_cols=860 Identities=12% Similarity=0.067 Sum_probs=631.3
Q ss_pred CCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
Q ss_conf 63369686456217893689889999679999787754335897655334467456653355433444401121014565
Q 001730 13 IVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGI 92 (1019)
Q Consensus 13 ~~~~~~~~~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (1019)
....+..+.+.|++.+|+||++|++++++.. +
T Consensus 27 ~~~~~~~~~~~~~~~~l~nGl~v~~~~~~~~--------------~---------------------------------- 58 (995)
T 2fge_A 27 EEFISECKSKAILFKHKKTGCEVMSVSNEDE--------------N---------------------------------- 58 (995)
T ss_dssp EEEETTTTEEEEEEEETTTCCEEEEEECSCS--------------S----------------------------------
T ss_pred EEECCCCCCEEEEEEECCCCCEEEEEECCCC--------------C----------------------------------
T ss_conf 8703211545799999789988999976998--------------6----------------------------------
Q ss_pred CCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHH-CCCCCEEEECCCCEEEEEEEC-HHH
Q ss_conf 554442589999277788899999983499987600597679990079999995-499610564799259999829-222
Q 001730 93 FSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSK-HGGSSNAYTETEHTCYHFEIK-REF 170 (1019)
Q Consensus 93 ~~~~~~~~~~l~~~~Gs~~ep~~~~Glahllehllf~Gs~~~~~~~~~~~~l~~-~g~~~na~t~~d~t~~~~~~~-~~~ 170 (1019)
. ++.+|++.+|.+..|+||++|||+|+||++||..+.+.+++.. .|+.+||+|+.|+|+|++.+. .++
T Consensus 59 -----~-----~~~vg~~~e~~~~~GlAH~lEHm~f~Gt~~~p~~~~~~~~l~~~~g~~~NA~T~~d~T~y~~~~~~~~~ 128 (995)
T 2fge_A 59 -----K-----VFGVVFRTPPKDSTGIPHILQHSVLCGSRKYPVKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNTKD 128 (995)
T ss_dssp -----E-----EEEEEEECCCSSSSCHHHHHHHHTTSCBTTBCSSCHHHHHHHHCCEEEECCEECSSEEEEEEEESSHHH
T ss_pred -----C-----EEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCEEEEEECCCHHH
T ss_conf -----1-----799996789869987689999997178878998467999997551887420677983599984488899
Q ss_pred HHHHHHHHHHHCCCCCC--CHHHHHHH---------------HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99999999961007899--92579999---------------98999999850199799999999830899999986776
Q 001730 171 LKGALMRFSQFFISPLM--KVEAMERE---------------VLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFW 233 (1019)
Q Consensus 171 l~~~L~~l~~~~~~P~~--~~~~~~~e---------------~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 233 (1019)
|+.+|+++++++.+|.| +++.|++| +++|.+|++...++|.+++++.+...+|++|||+++++
T Consensus 129 ~~~~l~~~~d~~~~p~~~~~~~~~~~E~~~~e~~~~~~~~~~r~vV~~E~~~~~~~p~~~~~~~~~~~~~~~~py~~~~~ 208 (995)
T 2fge_A 129 FYNLVDVYLDAVFFPKCVDDAHTFQQEGWHYELNDPSEDISYKGVVFNEMKGVYSQPDNILGRIAQQALSPENTYGVDSG 208 (995)
T ss_dssp HHHHHHHHHHHHHSBGGGTSSHHHHHHTCEEECSCTTSCCEEECHHHHHHHHHTTSHHHHHHHHHHHHHCTTSGGGSCTT
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999999758787799899987666640456554321223199998750488899999999997189998877799
Q ss_pred CCHHCCHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCCCCE
Q ss_conf 7533000042059128999999998206878709999849999999999998702445--89888987654543344440
Q 001730 234 GNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVR--KGPQIKPQFTVEGTIWKACK 311 (1019)
Q Consensus 234 G~~~~l~~~~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~--~~~~~~~~~~~~~~~~~~~~ 311 (1019)
|+.++|.+ +++++|++||++||+|+||+|+++||+++++++++++++|+.|+ +...+.+.. +.+++....
T Consensus 209 G~~~~i~~------~t~~~l~~f~~~~Y~p~n~~l~v~Gd~d~~~~~~~i~~~f~~~~~~~~~~~~~~~--~~~~~~~~~ 280 (995)
T 2fge_A 209 GDPKDIPN------LTFEEFKEFHRQYYHPSNARIWFYGDDDPVHRLRVLSEYLDMFEASPSPNSSKIK--FQKLFSEPV 280 (995)
T ss_dssp CCTTTGGG------CCHHHHHHHHHHHSSGGGEEEEEEESSCHHHHHHHHHHHHTTCCCCSHHHHSCCC--CCCCCSSCE
T ss_pred CCHHHHHH------CCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC--CCCCCCCCC
T ss_conf 99676321------5899999999981884216999986999999999999998517754567776657--777888870
Q ss_pred ----EEEE---EECCCCCEEEEEEECCCCC-HHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC-CCCCCCCCC
Q ss_conf ----8999---8636653699999648971-332039199999984489998089999856863400011-167778876
Q 001730 312 ----LFRL---EAVKDVHILDLTWTLPCLH-QEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAG-VGDEGMHRS 382 (1019)
Q Consensus 312 ----~~~~---~~~~~~~~i~i~~~~~~~~-~~~~~~~~~~l~~iL~~~~~~~L~~~Lr~~gl~y~i~~~-~~~~~~~~~ 382 (1019)
.+.+ .+..+++.+.++|++|... +..+..++.+++++||++..++|++.||++||+|+++++ +.. ...
T Consensus 281 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~vl~~~Lg~~~~S~L~~~l~e~gl~~~~~~~~~~~-~~~-- 357 (995)
T 2fge_A 281 RLVEKYPAGRDGDLKKKHMLCVNWLLSEKPLDLQTQLALGFLDHLMLGTPASPLRKILLESGLGEALVSSGLSD-ELL-- 357 (995)
T ss_dssp EEEEEEECCSSSCGGGCEEEEEEEECCSSCCCHHHHHHHHHHHHHHHSSTTSHHHHHHHHTTSCSEECSCEEEC-SSS--
T ss_pred EEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEECCCCC-CCC--
T ss_conf 58886056778876676089999976887679889899999999976799878999998638875426515356-666--
Q ss_pred CCCEEEEEEE-EECHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCC-CCHH--HHHHHHHHHCCC
Q ss_conf 5301899999-91912241099999999999999997299148999996500232213568-9907--999999985468
Q 001730 383 SIAYIFVMSI-HLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEE-QPQD--DYAAELAGNLLI 458 (1019)
Q Consensus 383 ~~~g~~~i~~-~~~~~g~~~~~~v~~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~-~~~~--~~~~~l~~~~~~ 458 (1019)
.|.|.|.+ .+.+ ++++++++.++++|+++++.|+++++++++|+.+...+..... +.+. .++..++..+..
T Consensus 358 --~~~f~i~~~~~~~---~~~~~~~~~i~~~l~~l~~~g~~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (995)
T 2fge_A 358 --QPQFGIGLKGVSE---ENVQKVEELIMDTLKKLAEEGFDNDAVEASMNTIEFSLRENNTGSFPRGLSLMLQSISKWIY 432 (995)
T ss_dssp --SCEEEEEEEEECG---GGHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCTTSCHHHHHHHHHHHHHTT
T ss_pred --CEEEEEEEEECCH---HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
T ss_conf --7079999994888---78999999999999999873989999999999999997741578896179999999998766
Q ss_pred -CCCCCCCCCCCCCCCCCH----H----HHHHHHHC-CCCC-CEEEEEEECCCCC-CCCCCCCCEECCCCCCCCCCHHH-
Q ss_conf -995442223533657979----9----99999840-4957-6199998179778-87762022121200011389368-
Q 001730 459 -YPAEHVIYGEYMYEVWDE----E----MIKHLLGF-FMPE-NMRIDVVSKSFAK-SQDFHYEPWFGSRYTEEDISPSL- 525 (1019)
Q Consensus 459 -~~~~~~l~~~~~i~~~t~----e----~i~~~~~~-l~~~-~~~i~i~~p~~~~-~~~~~~~~~~~~~y~~~~i~~~~- 525 (1019)
.++...+.....++++++ + +|++++++ +.++ +..+++++|+... ......++|+...|. ..+.++.
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~e~~~l~~~~-~~~~~~~~ 511 (995)
T 2fge_A 433 DMDPFEPLKYTEPLKALKTRIAEEGSKAVFSPLIEKLILNNSHRVTIEMQPDPEKATQEEVEEKNILEKVK-AAMTEEDL 511 (995)
T ss_dssp TSCSSGGGCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTTCCCEEEEEEEEETTHHHHHHHHHHHHHHHHH-HTSCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH-HHCCHHHH
T ss_conf 99967876459999999987507860799999999981579945899998380289999999999999998-73899999
Q ss_pred ---------HHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEE
Q ss_conf ---------98424999999876799999899988300015778897778999486316982689723797789717999
Q 001730 526 ---------MELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTY 596 (1019)
Q Consensus 526 ---------~~~~~~~~~~~~~~~lP~~n~~ip~~~~l~~~~~~~~~~~~~~P~~i~~~~g~~v~~~~~~~f~~P~~~i~ 596 (1019)
++.|+.... . |+...++|.. .+.++.... ...|..+...+|++||++++ +..|.+.+.
T Consensus 512 ~~~~~~~~~l~~~~~~~~-~-----~~~~~~~p~~-~~~~i~~~~----~~~~~~~~~~nG~~v~~~~~--~~~~~v~~~ 578 (995)
T 2fge_A 512 AELARATEELKLKQETPD-P-----PEALRCVPSL-NLGDIPKEP----TYVPTEVGDINGVKVLRHDL--FTNDIIYTE 578 (995)
T ss_dssp HHHHHHHHHHHHHHTSCC-C-----HHHHTTSCCC-CGGGSCSSC----CCCCCEEEESSSSEEEEEEC--CCSSEEEEE
T ss_pred HHHHHHHHHHHHHHCCCC-C-----HHHHHHCCCC-CHHHCCCCC----CCCCCEEEECCCCEEEEEEC--CCCCEEEEE
T ss_conf 999999999999855899-8-----6788744779-976667667----87884356408924999866--989869999
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHH-HHHH-------HHHHHCCCEE-EE--EEEC-----CEEEEEEEECCCCHH
Q ss_conf 99971798779999999999999999999-7885-------7653327289-99--8717-----616999960499889
Q 001730 597 FRINLKGGYDNVKNCILTELFIHLLKDEL-NEII-------YQASVAKLET-SV--SIFS-----DKLELKVYGFNDKLP 660 (1019)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~-------~~~~~~g~~~-~~--~~~~-----~gl~l~~~g~s~~l~ 660 (1019)
+.+ +....+.+..+++.+++.++.... ..+. .....+|+++ ++ +.+. .++.+++++++++++
T Consensus 579 ~~~--~~~~~~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~ggl~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~ 656 (995)
T 2fge_A 579 VVF--DIGSLKHELLPLVPLFCQSLLEMGTKDLTFVQLNQLIGRKTGGISVYPLTSSVRGKDEPCSKIIVRGKSMAGRAD 656 (995)
T ss_dssp EEE--ECTTSCTTTGGGHHHHHHHHHHSCCSSSCHHHHHHHHHHHSSEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHH
T ss_pred EEE--ECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEEEEHHHHH
T ss_conf 996--178899788343799999998489988889999999997317648411454667654556269999998364199
Q ss_pred HHHHHHHHHHHCCCCCHH-HHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCCCC--------HHHHH--------H
Q ss_conf 999999999840799988-999999999999982213-91458999999851379999--------98999--------8
Q 001730 661 VLLSKILAIAKSFLPSDD-RFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYD--------VDEKL--------S 722 (1019)
Q Consensus 661 ~~l~~l~~~l~~~~~~~~-~f~~~k~~~~~~l~~~~~-~p~~~a~~~~~~ll~~~~~~--------~~~~~--------~ 722 (1019)
.+++++.+.+.+|.|+++ +|+++|++++..+++... +++..|...+..++.+.++. ....+ +
T Consensus 657 ~~l~ll~e~l~~p~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~gl~~~~~~~~l~~~~~e 736 (995)
T 2fge_A 657 DLFNLMNCLLQEVQFTDQQRFKQFVSQSRARMENRLRGSGHGIAAARMDAMLNIAGWMSEQMGGLSYLEFLHTLEKKVDE 736 (995)
T ss_dssp HHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTTCHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf 99999999997388891899999999999878875442699999999987379468999997359999999999986541
Q ss_pred HHCCCCHHHHHHHHHHHHHHHCEEEEEECCCCH-HHHHHHHHHHHHHH-CCCCCCCCCCCCCEEEECCCCCEEEEEECCC
Q ss_conf 731599999999999998501158887338999-99999999999461-5899982122453158779997289973246
Q 001730 723 ILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQ-EEAIHISNIFKSIF-SVQPLPIEMRHQECVICLPSGANLVRNVSVK 800 (1019)
Q Consensus 723 ~l~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~-~~a~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1019)
.++.+ .+++++|++++|.+.+++++|+||++. +++.++++.+++.+ +....+.. ....+.+.... . ..
T Consensus 737 ~~~~i-~~~L~~~~~~~~~~~~~~~~v~Gd~~~~~~~~~~~~~~~~~l~p~~~~~~~------~~~~~~~~~~~-~--~~ 806 (995)
T 2fge_A 737 DWEGI-SSSLEEIRRSLLARNGCIVNMTADGKSLTNVEKSVAKFLDLLPENPSGGLV------TWDGRLPLRNE-A--IV 806 (995)
T ss_dssp CHHHH-HHHHHHHHHHHCCSTTCEEEEEECHHHHHHHHHHHHHHHHTSCSSCSSCSC------CCCCCCCCCCE-E--EE
T ss_pred CHHHH-HHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCC------CCCCCCCCCCE-E--EE
T ss_conf 89999-999999999972868848999948899988999999999852756777777------65556776544-8--99
Q ss_pred CCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHC-HHHHHHHHHCCCCCEEEEEEEEEECCEEE-EEEEEECCCC
Q ss_conf 878866426889997223568561899999999999851-34368742011232699933345378336-9999968999
Q 001730 801 NKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILE-EPFFNQLRTKEQLGYVVECSPRVTYRVFG-FCFCIQSSKY 878 (1019)
Q Consensus 801 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~ls-s~lf~~LR~~~~LgY~v~s~~~~~~~~~~-~~~~v~s~~~ 878 (1019)
.+...+. .++.++. ...++++.+++.+++++|+ ++||++||+ +|++|++++++.. .|..+ +. ...+
T Consensus 807 ~~~~v~~-----~~~~~~~-~~~~~~d~~al~vl~~iLg~~~L~~~iRe-~g~aYg~~s~~~~-~G~~~~~~--s~~d-- 874 (995)
T 2fge_A 807 IPTQVNY-----VGKAGNI-YSTGYELDGSAYVISKHISNTWLWDRVRV-SGGAYGGFCDFDS-HSGVFSYL--SYRD-- 874 (995)
T ss_dssp CSCSSBE-----EEEEEEG-GGGTCCCCTHHHHHHHHHHHTHHHHHTTT-TTCCSEEEEEEET-TTTEEEEE--EESB--
T ss_pred ECCCEEE-----EEEECCC-CCCCCCCCHHHHHHHHHHCCCCCHHHHHH-CCCCCCCCEEECC-CCCEEEEE--EECC--
T ss_conf 5574189-----9974477-78898664999999999777702788631-4877221317179-95689999--9728--
Q ss_pred CHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCH
Q ss_conf 95679999999999999997-07998999999999999870899997899999999984288888840899999915999
Q 001730 879 NPIYLQERIDNFISGLDELL-EGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKK 957 (1019)
Q Consensus 879 ~~~~l~~~i~~~l~~~~~~~-~~ise~el~~~K~~li~~~~~~~~s~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~iT~ 957 (1019)
+ .+.++++.|...+.... .++|++||+++|.++++++. .+.++...+.++|..+..+. .+++.+++++.|.+||+
T Consensus 875 -p-~~~~~~~~~~~~~~~l~~~~~te~el~~ak~~li~~~~-~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~i~~vT~ 950 (995)
T 2fge_A 875 -P-NLLKTLDIYDGTGDFLRGLDVDQETLTKAIIGTIGDVD-SYQLPDAKGYSSLLRHLLGV-TDEERQRKREEILTTSL 950 (995)
T ss_dssp -S-CSHHHHHHHHTHHHHHHTCCCCHHHHHHHHHHHHHHHT-CCCCHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHTCCH
T ss_pred -C-CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHCCCH
T ss_conf -9-98999999999999996299899999999999987336-88898999999999997495-99999999999982999
Q ss_pred HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHH
Q ss_conf 99999999861348998557999994488894100
Q 001730 958 NDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKES 992 (1019)
Q Consensus 958 edv~~~~~~~l~~~~~~~~~~~~~v~G~~~~~~~~ 992 (1019)
+||++++++|+.+- .+..++|+|+.+.+.+.
T Consensus 951 edv~~~a~~~~~~~----~~~~~~vvG~~~~i~~~ 981 (995)
T 2fge_A 951 KDFKDFAQAIDVVR----DKGVAVAVASAEDIDAA 981 (995)
T ss_dssp HHHHHHHHHHHHHH----HHCEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHH----CCCCEEEECCHHHHHHH
T ss_conf 99999999998653----36988998899999762
No 4
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A
Probab=1.00 E-value=1 Score=673.81 Aligned_cols=873 Identities=12% Similarity=0.073 Sum_probs=614.8
Q ss_pred CCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 69686456217893689889999679999787754335897655334467456653355433444401121014565554
Q 001730 16 KSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQ 95 (1019)
Q Consensus 16 ~~~~~~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (1019)
.|..+.+.|++..|+||++|++++++.. +
T Consensus 79 ~p~~~~~~~~~~~l~nGl~vl~i~~~~~--------------~------------------------------------- 107 (1193)
T 3s5m_A 79 NEEFKMTYTVYQHKKAKTQVISLGTNDP--------------L------------------------------------- 107 (1193)
T ss_dssp ETTTTEEEEEEEETTTCCEEEEEEECCT--------------T-------------------------------------
T ss_pred CCCCCCCCEEEEECCCCCEEEEEECCCC--------------C-------------------------------------
T ss_conf 8876665269999799988999998998--------------7-------------------------------------
Q ss_pred CCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHH--CCCCCEEEECCCCEEEEEEECH-HHHH
Q ss_conf 442589999277788899999983499987600597679990079999995--4996105647992599998292-2299
Q 001730 96 TKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSK--HGGSSNAYTETEHTCYHFEIKR-EFLK 172 (1019)
Q Consensus 96 ~~~~~~~l~~~~Gs~~ep~~~~Glahllehllf~Gs~~~~~~~~~~~~l~~--~g~~~na~t~~d~t~~~~~~~~-~~l~ 172 (1019)
.+. .++.+|+..+|.+..|+||++|||+|+||++||.. ++...+.. .|+.+||+|+.|+|+|++++.+ ++|+
T Consensus 108 --~~~--~~f~vg~~tep~~~~GvAH~lEHmlf~GS~k~p~~-e~~~~l~~~slG~~lNA~T~~D~T~Y~~~~~~~~~l~ 182 (1193)
T 3s5m_A 108 --DVE--QAFAFYVKTLTHSGKGIPHILEHSVLSGSKNYNYK-NSIGLLEKGTLHTHLNAYTFNDRTVYMAGSMNNKDFF 182 (1193)
T ss_dssp --CCC--EEEEEEEECCCSSSSCHHHHHHHHTTSCBTTBCCT-THHHHHHHSCCEEEEEEEECSSEEEEEEEESSHHHHH
T ss_pred --EEE--EEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHH-HHHHHHHHHCCCCEEEEEECCCEEEEEEEECCHHHHH
T ss_conf --078--99999978999997119999999983799898856-6999999754482487687687599999945788899
Q ss_pred HHHHHHHHHCCCCCCCHHH--HHHH-----------------------------HHHHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 9999999610078999257--9999-----------------------------98999999850199799999999830
Q 001730 173 GALMRFSQFFISPLMKVEA--MERE-----------------------------VLAVDSEFNQALQNDACRLQQLQCHT 221 (1019)
Q Consensus 173 ~~L~~l~~~~~~P~~~~~~--~~~e-----------------------------~~~v~~E~~~~~~~~~~~~~~~~~~~ 221 (1019)
.+|+++++++++|.|++++ |.+| +++|.+|+++..++|..++++.+...
T Consensus 183 ~~L~l~~D~v~~P~l~~~~~~F~qE~~~~E~e~~~~~Er~~~~~~~~~~~~l~~k~vV~~E~k~~~~~p~~~~~~~l~~~ 262 (1193)
T 3s5m_A 183 NIMGVYMDSVFQPNVLENKYIFETEGWTYEVEKLKEDEKGKAEIPQMKDYKVSFNGIVYNEMKGALSSPLEDLYHEEMKY 262 (1193)
T ss_dssp HHHHHHHHHHHSBGGGTCHHHHHHHTCEEEEEECCTTTTTCTTSCEETTEEEEEECHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99999999985878763211022456665431110011012222222210045899999999975589999999999998
Q ss_pred CCCCCCCCCCCCCCHHCCHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC--C
Q ss_conf 89999998677675330000420591289999999982068787099998499999999999987024458988898--7
Q 001730 222 SQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKP--Q 299 (1019)
Q Consensus 222 ~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~--~ 299 (1019)
+|++|||+++++|++++|.+ +++++|++||++||+|+||+|+++||++++++.++++++|+.|+.+..+.. .
T Consensus 263 lf~~hpY~~~~~G~~e~I~~------lt~edl~~F~~~~Y~P~Na~l~v~Gdid~~~~~~~v~~~f~~~~~~~~~~~~~~ 336 (1193)
T 3s5m_A 263 MFPDNVHSNNSGGDPKEITN------LTYEEFKEFYYKNYNPKKVKVFFFSKNNPTELLNFVDQYLGQLDYSKYRDDAVE 336 (1193)
T ss_dssp HCTTSGGGSCTTCCHHHHTT------CCHHHHHHHHHHHSCTTTCEEEEEESSCTHHHHHHHHHHHTTCCGGGCCCCCCC
T ss_pred HCCCCCCCCCCCCCHHHHHH------CCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 57999998899999999851------899999999998609566699999268899999999998605887777766666
Q ss_pred CCCCCCCCCCCEEEEEE----ECCCCCEEEEEEECCCC----CH-----------------------------HHHCCHH
Q ss_conf 65454334444089998----63665369999964897----13-----------------------------3203919
Q 001730 300 FTVEGTIWKACKLFRLE----AVKDVHILDLTWTLPCL----HQ-----------------------------EYLKKSE 342 (1019)
Q Consensus 300 ~~~~~~~~~~~~~~~~~----~~~~~~~i~i~~~~~~~----~~-----------------------------~~~~~~~ 342 (1019)
..+..+++...+.+... ....+..+.++|++|.. .+ ..+..++
T Consensus 337 ~~~~~~~~~~~~~v~~~~~~~~~~~q~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~d~~al 416 (1193)
T 3s5m_A 337 SVEYQTYKKGPFYIKKKYGDHSEEKENLVSVAWLLNPKVDKTNNHNNNHSNNQSSENNGYSNGSHSSDLSLENPTDYFVL 416 (1193)
T ss_dssp CCCCCBCCCCCEEEEEEEECCCSSCCEEEEEEEESSCBCC----------------------CCCCSTTCCCSHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 66777877888699994689998651389999982675444445322344310001111123321112245686279999
Q ss_pred HHHHHHHCCCCCCCHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCEEEEEEEEECHHH------HHCH-HHHHHHHHHHHH
Q ss_conf 99999844899980899998568634000-111677788765301899999919122------4109-999999999999
Q 001730 343 DYLAHLLGHEGRGSLHSFLKGRGWATSIS-AGVGDEGMHRSSIAYIFVMSIHLTDSG------LEKI-FDIIGFVYQYIK 414 (1019)
Q Consensus 343 ~~l~~iL~~~~~~~L~~~Lr~~gl~y~i~-~~~~~~~~~~~~~~g~~~i~~~~~~~g------~~~~-~~v~~~i~~~l~ 414 (1019)
.+++++||++.+++|++.||++|++|+++ +++.... . .+.|.|.+...+.+ .+++ +++.+.|.++|+
T Consensus 417 ~vL~~iLggg~sSrL~~~L~e~gLa~~v~~~~~~~~~-~----~~~f~i~~~g~~~~~~~~~~~~~~~~~~~~~I~~~L~ 491 (1193)
T 3s5m_A 417 LIINNLLIHTPESVLYKALTDCGLGNNVIDRGLNDSL-V----QYIFSIGLKGIKRNNEKIKNFDKVHYEVEDVIMNALK 491 (1193)
T ss_dssp HHHHHHHHSSTTSHHHHHHHHHCSCSEEEEEEEECSS-S----SCEEEEEEEEECTTCTTCSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCCC-C----CCEEEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999997799987799999966980354665456556-7----8689999965783431453102489999999999999
Q ss_pred HHHHCCCCHHHHHHHHHHCCCCEECCCCCCHH--HHHHHHHHHC-CCCCCCCCCCCCCCCCCCCH------HHHHHHHHC
Q ss_conf 99972991489999965002322135689907--9999999854-68995442223533657979------999999840
Q 001730 415 LLRQVSPQKWIFKELQDIGNMEFRFAEEQPQD--DYAAELAGNL-LIYPAEHVIYGEYMYEVWDE------EMIKHLLGF 485 (1019)
Q Consensus 415 ~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~--~~~~~l~~~~-~~~~~~~~l~~~~~i~~~t~------e~i~~~~~~ 485 (1019)
+++++||++++++++++.+...+.......+. .++..++..+ +..+|...+.+...++.+.. +++++++++
T Consensus 492 ~l~~~gi~~~ele~a~~~le~~~re~~~~~~~gl~~~~~~~~~w~~~~dp~~~l~~~~~l~~l~~~~~~~~~~~~~li~~ 571 (1193)
T 3s5m_A 492 KVVKEGFNKSAVEASINNIEFILKEANLKTSKSIDFVFEMTSKLNYNRDPLLIFEFEKYLNIVKNKIKNEPMYLEKFVEK 571 (1193)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHTTCCTTTTTSHHHHHHHHHHHHHHSTTHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 99872989999999999999987751379970999999987887807998998778999999999861084999999999
Q ss_pred -CCCC-CEEEEEEECCCC-CCCCCCCCCEECCCCCCCCCCHH----------HHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -4957-619999817977-88776202212120001138936----------8984249999998767999998999883
Q 001730 486 -FMPE-NMRIDVVSKSFA-KSQDFHYEPWFGSRYTEEDISPS----------LMELWRNPPEIDVSLQLPSQNEFIPTDF 552 (1019)
Q Consensus 486 -l~~~-~~~i~i~~p~~~-~~~~~~~~~~~~~~y~~~~i~~~----------~~~~~~~~~~~~~~~~lP~~n~~ip~~~ 552 (1019)
|..+ +..++++.|+.. ..+....++- ..+-....++++ .++.|++..+....+ .++|+ +
T Consensus 572 yll~n~~~~~~~~~P~~~~~~~~~~~e~~-~L~~~~~~ls~~~~~~i~~~~~~L~~~q~~~~~~e~l------~~lP~-l 643 (1193)
T 3s5m_A 572 HFINNAHRSVILLEGDENYAQEQENLEKQ-ELKKRIENFNEQEKEQVIKNFEELSKYKNAEESPEHL------NKFPI-I 643 (1193)
T ss_dssp HTTTCCCEEEEEEEEESSHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHH------TTSCC-C
T ss_pred HHCCCCCEEEEEEECCCCHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHH------HHCCC-C
T ss_conf 83349963899997288777899999999-9999986389999999999999999987377975469------74784-7
Q ss_pred EECCCCCCCCCCCCCCCEEE------------------------------------------------------------
Q ss_conf 00015778897778999486------------------------------------------------------------
Q 001730 553 SIRANDISNDLVTVTSPTCI------------------------------------------------------------ 572 (1019)
Q Consensus 553 ~l~~~~~~~~~~~~~~P~~i------------------------------------------------------------ 572 (1019)
++.+++.... ..|...
T Consensus 644 ~~~Di~~~~~----~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (1193)
T 3s5m_A 644 SISDLNKKTL----EVPVNVYFTNINENNNIMETYNKLKTNEHMLKDNMDVFLKKYVLKNDKHNTNNNNNNNNNMDYSFT 719 (1193)
T ss_dssp CGGGSCSSCC----CCCCEEEEECTTTCSCHHHHHHHHHTCHHHHHHHHHHHHHHHTTC---------------------
T ss_pred CHHHCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 0987688766----676301122222112210001111111111222110000000012222222322222332222221
Q ss_pred --ECCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH--------HHHHHHHCCCEEEEE
Q ss_conf --3169826897237977897179999997179877999999999999999999978--------857653327289998
Q 001730 573 --IDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE--------IIYQASVAKLETSVS 642 (1019)
Q Consensus 573 --~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--------~~~~~~~~g~~~~~~ 642 (1019)
...+|+++|+++.++ ++.+|+++.++....+.+...++.||+.+|....++ .......+|++++++
T Consensus 720 ~~~~~~gv~v~~~~~~T----NGIvY~~l~fdl~~l~~e~l~yl~Lf~~~L~~lGT~~~sy~el~~~i~~~tGGis~s~~ 795 (1193)
T 3s5m_A 720 ETKYEGNVPILVYEMPT----TGIVYLQFVFSLDHLTVDELAYLNLFKTLILENKTNKRSSEDFVILREKNIGSMSANVA 795 (1193)
T ss_dssp CCTTTTCEEEEEEECCC----TTEEEEEEEEECTTCCHHHHTTHHHHHHHTTTCCBSSSCHHHHHHHHHHHCSEEEEEEE
T ss_pred CCCCCCCEEEEEEECCC----CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEE
T ss_conf 11344983799998799----98699999987999997887569999999984799999999999999985885588766
Q ss_pred EE--------------CCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHCCCC-HHHHHHHHH
Q ss_conf 71--------------761699996049988999999999984079998-89999999999999822139-145899999
Q 001730 643 IF--------------SDKLELKVYGFNDKLPVLLSKILAIAKSFLPSD-DRFKVIKEDVVRTLKNTNMK-PLSHSSYLR 706 (1019)
Q Consensus 643 ~~--------------~~gl~l~~~g~s~~l~~~l~~l~~~l~~~~~~~-~~f~~~k~~~~~~l~~~~~~-p~~~a~~~~ 706 (1019)
+. ...+.++..+++++++++++++.++|.++.|++ +++..+..+.+..+.+...+ ++.+|..++
T Consensus 796 ~~~~~~~~~~~~~~~~~~~~~vs~kaL~~n~~~~~~Ll~eiL~~~~F~d~eRlk~ll~~~ks~le~~i~~sGH~~A~~ra 875 (1193)
T 3s5m_A 796 LYSKDDHLNVTDKYNAQALFNLEMHVLSHKCNDALNIALEAVKESDFSNKKKVIDILKRKINGMKTTFSEKGYAILMKYV 875 (1193)
T ss_dssp EECCCBTTBCCCTTCCEEEEEEEEEEEGGGHHHHHHHHHHHHHSBCTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHT
T ss_pred EECCCCCCCCCCCCCCCCEEEEEEEEHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 50365544556655656469999997442699999999999857999968999999999999887314246689999999
Q ss_pred HHHHCCCCCC--------HHHHHHH--------HCCCCHHHHHHHHHHHHHHHCEEEEEECCCCH-HHHHHHHHHHHHHH
Q ss_conf 9851379999--------9899987--------31599999999999998501158887338999-99999999999461
Q 001730 707 LQVLCQSFYD--------VDEKLSI--------LHGLSLADLMAFIPELRSQLYIEGLCHGNLSQ-EEAIHISNIFKSIF 769 (1019)
Q Consensus 707 ~~ll~~~~~~--------~~~~~~~--------l~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~-~~a~~l~~~~~~~~ 769 (1019)
.+.+.+.++- ....+.. ++.+ .++|+++++++|++.++.+.++|+.+. +++...++.+++.+
T Consensus 876 ~s~~s~~~~~~e~~~Gl~~~~fl~~l~~~~e~~~~~l-~~~L~~i~~~if~~~nl~vsvtg~~~~~~~~~~~l~~~l~~l 954 (1193)
T 3s5m_A 876 KAHLNSKHYAHNIIYGYENYLKLQEQLELAENDFKTL-ENILVRIRNKIFNKKNLMVSVTSDYGALKHLFVNSNESLKNL 954 (1193)
T ss_dssp TTTTCHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHH-HHHHHHHHHHHSCSTTEEEEEEECGGGTHHHHTTTHHHHHHH
T ss_pred HHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_conf 9864750223442078579999999998667559999-999999999981878839999947656999999999999751
Q ss_pred CC----CCC----------CC--CCC----CCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCHHHHH
Q ss_conf 58----999----------82--122----45315877999728997324687886642688999722356856189999
Q 001730 770 SV----QPL----------PI--EMR----HQECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKA 829 (1019)
Q Consensus 770 ~~----~~~----------~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 829 (1019)
+. ... +. ..+ ........+...+.. ...+..++.+.. .+.. ....+++.+
T Consensus 955 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~----~~~p~~v~yv~~--~~~~----~~~~~~d~~ 1024 (1193)
T 3s5m_A 955 VSYFEENDKYINDMQNKVNDPTVMGWNEEIKSKKLFDEEKVKKEF----FVLPTFVNSVSM--SGIL----FKPGEYLDP 1024 (1193)
T ss_dssp HHHHHHGGGGSCCCCSSSCCCCCCCHHHHHHHTTCCCTTCCEEEE----EECCCSSBEEEE--EEEC----SCTTCBCCT
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE----EECCCCCEEEEE--EECC----CCCCCCCHH
T ss_conf 210255664322222334454433222222332223555555506----742786469999--7247----777987609
Q ss_pred HHHHHHHHHC-HHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 9999999851-343687420112326999333453783369999968999956799999999999999970799899999
Q 001730 830 LIDLFDEILE-EPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFEN 908 (1019)
Q Consensus 830 ~~~ll~~~ls-s~lf~~LR~~~~LgY~v~s~~~~~~~~~~~~~~v~s~~~~~~~l~~~i~~~l~~~~~~~~~ise~el~~ 908 (1019)
++.+++.+|+ ++||++||++.| +|+++|++. ..|. +.|+...+ -.+.+..+.+.+.+..+....+++|++||++
T Consensus 1025 al~Vl~~iLg~~~L~~eIREkgG-AYg~~s~~~-~~G~--f~~~syrd-p~~~~tl~~~~~~~~~l~~~~~~~teeEL~~ 1099 (1193)
T 3s5m_A 1025 SFTVIVAALKNSYLWDTVRGLNG-AYGVFADIE-YDGS--VVFLSARD-PNLEKTLATFRESAKGLRKMADTMTENDLLR 1099 (1193)
T ss_dssp HHHHHHHHHHHTHHHHHHTTTTC-CSEEEEEEC-TTSE--EEEEEESB-SCSHHHHHHHHTHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHCCC-EEEEEEECC-CCCC--EEEEEEEC-CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 99999999782477999976187-268877616-7886--79999807-9879999999999999996358989999999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCC---CCCCCCEEEEEEECC
Q ss_conf 99999998708999978999999999842888888408999999159999999999986134---899855799999448
Q 001730 909 YRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQ---WSPKCRRLAVRVWGC 985 (1019)
Q Consensus 909 ~K~~li~~~~~~~~s~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~iT~edv~~~~~~~l~~---~~~~~~~~~~~v~G~ 985 (1019)
+|.++++++. .+.++...+.+.+.....| .+.++.+++++.|.+||.+||++++++|+.+ . ...++|+|+
T Consensus 1100 ak~~~~~~~d-~p~~p~~~a~~~~~~~~~G-l~~d~~~~~~~~I~aVT~edv~~vA~~~~~~l~~~-----~~~~vvvG~ 1172 (1193)
T 3s5m_A 1100 YIINTIGTID-KPRRGIELSKLSFLRLISN-ESEQDRVEFRKRIMNTKKEDFYKFADLLESKVNEF-----EKNIVIITT 1172 (1193)
T ss_dssp HHHHHHHHHS-CCCCTHHHHHHHHHHHHTT-CCHHHHHHHHHHHHTCCHHHHHHHHHHHHHTHHHH-----TTEEEEEEC
T ss_pred HHHHHHHCCC-CCCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC-----CCEEEEECC
T ss_conf 9999983666-6689699999999999819-59999999999998099999999999985132136-----736999858
Q ss_pred CCCCCHHHC
Q ss_conf 889410000
Q 001730 986 NTNIKESEK 994 (1019)
Q Consensus 986 ~~~~~~~~~ 994 (1019)
...+.+...
T Consensus 1173 ~~~i~~~l~ 1181 (1193)
T 3s5m_A 1173 KEKANEYIA 1181 (1193)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 888535776
No 5
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}
Probab=1.00 E-value=1 Score=454.10 Aligned_cols=400 Identities=20% Similarity=0.209 Sum_probs=349.4
Q ss_pred CCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEE
Q ss_conf 21789368988999967999978775433589765533446745665335543344440112101456555444258999
Q 001730 24 YRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAAM 103 (1019)
Q Consensus 24 ~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 103 (1019)
++..+|+||++|++++++.. + .+.+++
T Consensus 2 ~~~~~L~NGl~v~~~~~~~~--------------~---------------------------------------~~~~~l 28 (406)
T 3eoq_A 2 FREAELRNGLRVIAEVVPGA--------------R---------------------------------------SVALGY 28 (406)
T ss_dssp EEEEECTTSCEEEEEECTTC--------------S---------------------------------------CEEEEE
T ss_pred CEEEECCCCCEEEEEECCCC--------------C---------------------------------------EEEEEE
T ss_conf 64698689998999987999--------------7---------------------------------------699999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHHCC
Q ss_conf 92777888999999834999876005976799900799999954996105647992599998292229999999996100
Q 001730 104 CVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFI 183 (1019)
Q Consensus 104 ~~~~Gs~~ep~~~~Glahllehllf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~d~t~~~~~~~~~~l~~~L~~l~~~~~ 183 (1019)
++++|+.+||.+..|+||++|||+|+||++|+. .++.+.++.+|+.+||+|+.++|+|++++++++++.+|+++++++
T Consensus 29 ~~~~Gs~~e~~~~~G~ah~lehmlf~Gt~~~~~-~~~~~~l~~~G~~~na~t~~d~t~y~~~~~~~~l~~~l~ll~d~~- 106 (406)
T 3eoq_A 29 FVKTGARDETKEESGVSHFLEHMVFKGPEDMDA-LAVNRAFDRMGAQYNAFTSEEATVYYGAVLPEFAYDLLGLFAKLL- 106 (406)
T ss_dssp EESCSGGGSCGGGTTHHHHHHHHHTTCCTTCCH-HHHHHHHHHTTCEEEEEECSSCEEEEEEECGGGHHHHHHHHHHHT-
T ss_pred EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH-HHHHHHHHHHCCCCCCEECCCEEEEEEEECHHHHHHHHHHHHHHH-
T ss_conf 985425788999888999999987179999998-999999998488735264477489999955788999999999985-
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHCCCCHHHHHHHHHHHCCCC
Q ss_conf 78999257999998999999850199799999999830899999986776753300004205912899999999820687
Q 001730 184 SPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQG 263 (1019)
Q Consensus 184 ~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~p 263 (1019)
+|.|++++|++|++++.+|++...++|..++.+.+...+|++|||+++..|+.++|.+ ++.++|++||++||+|
T Consensus 107 ~p~f~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~i~~------~t~~~l~~f~~~~y~p 180 (406)
T 3eoq_A 107 RPALREEDFQTEKLVILEEIARYQDRPGFMAYEWARARFFQGHPLGNSVLGTRESITA------LTREGMAAYHRRRYLP 180 (406)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCGGGCCSSCCHHHHHH------CCHHHHHHHHHHHCCG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH------CCHHHHHHHHHHHCCC
T ss_conf 6899989999999999999987429978999999999843899998888689999963------8999999999984886
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC-CCCEEEEEEECCCCCHHHHCCHH
Q ss_conf 87099998499999999999987024458988898765454334444089998636-65369999964897133203919
Q 001730 264 GLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVK-DVHILDLTWTLPCLHQEYLKKSE 342 (1019)
Q Consensus 264 ~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~~~~~~~~~~~~~~~~ 342 (1019)
+||+|+++||++++++.++++++|+.|+..+.+.+ . + +....++.+...... +++.+.++|+.+...+. +..++
T Consensus 181 ~n~~l~v~Gd~~~~~~~~~i~~~f~~~~~~~~~~~-~--~-~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~-d~~~l 255 (406)
T 3eoq_A 181 KNMVLAATGRVDFDRLLAEAERLTEAWPEGEAERA-Y--P-PLTPAFGVEERPYEKARALYLVALFPGVAYQEE-ARFPG 255 (406)
T ss_dssp GGEEEEEEESCCHHHHHHHHHHHHTTCCCCCCCCC-C--C-CCCCCCEEEEEECTTCSSEEEEEEEECCCTTCT-THHHH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC-C--C-CCCCCCCEEEEECCCCCCEEEEEEECCCCCCCC-HHHHH
T ss_conf 67799998489999999999998357887888988-8--9-878888469983687350589999447998881-19999
Q ss_pred HHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999844899980899998568634000111677788765301899999919122410999999999999999972991
Q 001730 343 DYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQ 422 (1019)
Q Consensus 343 ~~l~~iL~~~~~~~L~~~Lr~~gl~y~i~~~~~~~~~~~~~~~g~~~i~~~~~~~g~~~~~~v~~~i~~~l~~l~~~~i~ 422 (1019)
.+++.+||+++.++|+..||++|++|+++++.... .+ .|.|.+++.+.+ ++++++++.+.+++++++++|++
T Consensus 256 ~vl~~iLgg~~~srL~~~lre~gl~y~~~s~~~~~-~~----~g~~~i~~~~~~---~~~~~~~~~i~~~l~~l~~~~~t 327 (406)
T 3eoq_A 256 QVLAHLLGEEGSGRLHFALVDKGLAEVASFGLEEA-DR----AGTFHAYVQADP---ARKGEVLAVLQEELDRLGREGVG 327 (406)
T ss_dssp HHHHHHHHCTTTSHHHHHTTTTTSEEEEEEEEEEC-SS----CEEEEEEEEECG---GGHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEECCC-CC----CEEEEEEEEECC---CHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999967996248899999759746999874056-78----637999998473---32999999999999999857999
Q ss_pred HHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHC-CCCCCEEEEEEECC
Q ss_conf 489999965002322135689907999999985468-995442223533657979999999840-49576199998179
Q 001730 423 KWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLI-YPAEHVIYGEYMYEVWDEEMIKHLLGF-FMPENMRIDVVSKS 499 (1019)
Q Consensus 423 ~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~l~~~~~i~~~t~e~i~~~~~~-l~~~~~~i~i~~p~ 499 (1019)
+++++++|+.+..++....+ ++...+..++..... .++.........++++|+++|++++++ +.+++. ++++||.
T Consensus 328 ~~el~~ak~~l~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~~l~~~~~-~~vvGp~ 404 (406)
T 3eoq_A 328 EEEVERAKTPLATGLVFAGE-TPMQRLFHLGMEYLYTGRYLSLEEVKARVQRVTSREVNALLERGFLEKGL-YYLVLPH 404 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-SHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHCCHHHHHHHHHTTTTTSCE-EEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCE-EEEECCC
T ss_conf 99999999999977877347-89999999999999669989999999999828999999999986585667-9997898
No 6
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=1.00 E-value=1 Score=452.53 Aligned_cols=412 Identities=13% Similarity=0.145 Sum_probs=354.9
Q ss_pred CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEE
Q ss_conf 56217893689889999679999787754335897655334467456653355433444401121014565554442589
Q 001730 22 RLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAA 101 (1019)
Q Consensus 22 ~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (1019)
..++.++|+||++|++++++.. + .+.+
T Consensus 5 ~~~~~~~L~NGl~v~~~~~~~~--------------~---------------------------------------~v~~ 31 (445)
T 3ami_A 5 ASTFETTLPNGLKVVVREDHRA--------------P---------------------------------------TLVH 31 (445)
T ss_dssp GGEEEEECTTSCEEEEEECTTS--------------S---------------------------------------EEEE
T ss_pred CCCEEEECCCCCEEEEEECCCC--------------C---------------------------------------EEEE
T ss_conf 6717999799998999977999--------------8---------------------------------------6999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHH
Q ss_conf 99927778889999998349998760059767999007999999549961056479925999982922299999999961
Q 001730 102 AMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQF 181 (1019)
Q Consensus 102 ~l~~~~Gs~~ep~~~~Glahllehllf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~d~t~~~~~~~~~~l~~~L~~l~~~ 181 (1019)
++++++|+.+||.+..|+||++|||+|+||++||. .++.+.++.+|+.+||+|+.++|+|++++++++++.+|++++++
T Consensus 32 ~~~~~~Gs~~e~~~~~Glah~lehmlf~Gt~~~~~-~~l~~~l~~~g~~~na~t~~d~t~y~~~~~~~~l~~~l~ll~d~ 110 (445)
T 3ami_A 32 MVWYRVGSMDETTGTTGVAHALEHMMFKGTKDVGP-GEFSKRVAAMGGRDNAFTTRDYTAYYQQVPSSRLSDVMGLEADR 110 (445)
T ss_dssp EEEESCCGGGCCTTCTTHHHHHHHHTTSCBSSSCT-THHHHHHHHTTCEEEEEECSSCEEEEEEEEGGGHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCH-HHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 99984556788988953899998701089988987-78999999829863301479857999978889999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHCCCCHHHHHHHHHHHC
Q ss_conf 00789992579999989999998-50199799999999830899999986776753300004205912899999999820
Q 001730 182 FISPLMKVEAMEREVLAVDSEFN-QALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNY 260 (1019)
Q Consensus 182 ~~~P~~~~~~~~~e~~~v~~E~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~ 260 (1019)
+.+|.|++++|++|++++.+|++ ...++|..++.+.+...+|++|||+++..|+.++|.+ ++.++|++||++|
T Consensus 111 ~~~p~f~~~~~~~e~~~v~~e~~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~e~l~~------it~~~l~~f~~~~ 184 (445)
T 3ami_A 111 MANLVVDDELFKKEIQVIAEERRWRTDDKPRSKAYEALMAASYVAHPYRVPVIGWMNDIQN------MTAQDVRDWYKRW 184 (445)
T ss_dssp HHCBCCCHHHHHHHHHHHHHHHHHTGGGCHHHHHHHHHHHHHCSSSGGGSCTTCCHHHHHH------CCHHHHHHHHHHH
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH------CCHHHHHHHHHHH
T ss_conf 6189999899999999999999854458847999999999860589877998889999865------7999999999971
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCC---CCHHH
Q ss_conf 687870999984999999999999870244589888987654543344440899986366536999996489---71332
Q 001730 261 YQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPC---LHQEY 337 (1019)
Q Consensus 261 y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~---~~~~~ 337 (1019)
|+|+||+|+++||++++++.++++++|+.||.+..+.+... ..+.....+.+.+.....++.+.++|+.|. ..+..
T Consensus 185 y~p~n~~l~vvGd~d~~~~~~~v~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~ 263 (445)
T 3ami_A 185 YGPNNATVVVVGDVEHEAVFRLAEQTYGKLARVEAPARKQQ-GEPQQAGVRRVTVKAPAELPYLALAWHVPAIVDLDKSR 263 (445)
T ss_dssp CSGGGEEEEEEESCCHHHHHHHHHHTGGGSCCCCCCCCCCC-CCCCCCSCEEEEEEEECSSCEEEEEEEECCCSSTTCCH
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCH
T ss_conf 88556699998289999999999998437988889987778-89887786589985687763799999768721256883
Q ss_pred HCCHHHHHHHHHCCCCCCCHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 0391999999844899980899998-568634000111677788765301899999919122410999999999999999
Q 001730 338 LKKSEDYLAHLLGHEGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLL 416 (1019)
Q Consensus 338 ~~~~~~~l~~iL~~~~~~~L~~~Lr-~~gl~y~i~~~~~~~~~~~~~~~g~~~i~~~~~~~g~~~~~~v~~~i~~~l~~l 416 (1019)
+..++.+++.+||++..++|+..|| ++|++|+++++......+ ..|.|.|++.+.+. .+++++++.+.++++++
T Consensus 264 ~~~~~~vl~~iLg~~~~srL~~~lre~~gl~y~v~~~~~~~~~~---~~g~~~i~~~~~~~--~~~~~~~~~i~~~l~~l 338 (445)
T 3ami_A 264 DAYALEILAAVLDGYDGARMTRQLVRGNKHAVSAGAGYDSLSRG---QQGLFILEGVPSKG--VTIAQLETDLRAQVRDI 338 (445)
T ss_dssp HHHHHHHHHHHHHSSTTCHHHHHTTTTSCCEEEEEEECCCCCSS---CCEEEEEEEEECTT--CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCC---CCCEEEEEEEECCC--CCHHHHHHHHHHHHHHH
T ss_conf 29999999999807723578999852588579998501233457---89759999997999--99999999999999999
Q ss_pred HHCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHC-CCCCCEEEE
Q ss_conf 9729914899999650023221356899079999999854689-95442223533657979999999840-495761999
Q 001730 417 RQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIY-PAEHVIYGEYMYEVWDEEMIKHLLGF-FMPENMRID 494 (1019)
Q Consensus 417 ~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~i~~~t~e~i~~~~~~-l~~~~~~i~ 494 (1019)
++.|+++++++++|+.+..++....+ ++..++..++.....+ ++.........++++|+++|++++++ |.++++.++
T Consensus 339 ~~~g~t~~el~~ak~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~~l~~~~~~~~ 417 (445)
T 3ami_A 339 AAKGVTEAELSRVKSQMVAGKVYEQD-SLMGQATQIGGLEVLGLSWRDDDRFYQQLRSVTAAEVKAAAARLLTDDTLTVA 417 (445)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHTTT-SHHHHHHHHHHHHTTTCCTTHHHHHHHHHHTCCHHHHHHHHHTTSCSTTEEEE
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 85398999999999999999999744-78999999999998179867899999999749999999999997185773999
Q ss_pred EEECCC
Q ss_conf 981797
Q 001730 495 VVSKSF 500 (1019)
Q Consensus 495 i~~p~~ 500 (1019)
+++|..
T Consensus 418 ~~~p~~ 423 (445)
T 3ami_A 418 NLVPLP 423 (445)
T ss_dssp EEEEEC
T ss_pred EECCCC
T ss_conf 975676
No 7
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125}
Probab=1.00 E-value=1 Score=435.95 Aligned_cols=402 Identities=16% Similarity=0.181 Sum_probs=348.5
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEE
Q ss_conf 62178936898899996799997877543358976553344674566533554334444011210145655544425899
Q 001730 23 LYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAA 102 (1019)
Q Consensus 23 ~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (1019)
.|+..+|+||++|++++++.. + .+.+.
T Consensus 1 ~~~~~~L~NGl~v~~~~~~~~--------------~---------------------------------------~~~~~ 27 (421)
T 3hdi_A 1 MINTMTLDNGVRIITEKMSTV--------------R---------------------------------------SVSIG 27 (421)
T ss_dssp -CEEEECTTSCEEEEEECTTC--------------S---------------------------------------EEEEE
T ss_pred CCEEEECCCCCEEEEEECCCC--------------C---------------------------------------EEEEE
T ss_conf 966798699988999987999--------------7---------------------------------------79999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHHC
Q ss_conf 99277788899999983499987600597679990079999995499610564799259999829222999999999610
Q 001730 103 MCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFF 182 (1019)
Q Consensus 103 l~~~~Gs~~ep~~~~Glahllehllf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~d~t~~~~~~~~~~l~~~L~~l~~~~ 182 (1019)
+++++|+.+||.+..|+||++|||+|+||++++. .++.+.++.+||.+||+|+.|+|+|++++++++++.+|+++++++
T Consensus 28 l~~~~Gs~~e~~~~~G~ah~leh~lf~gt~~~~~-~~~~~~l~~~G~~~na~t~~d~t~~~~~~~~~~l~~~l~ll~d~~ 106 (421)
T 3hdi_A 28 IWVGTGSRYESAEENGISHFLEHMFFKGTNTRSA-QEIAEFFDSIGGQVNAFTSKEYTCYYAKVLDDHAGQAIDTLSDMF 106 (421)
T ss_dssp EEESCCGGGCCGGGTTHHHHHHHHTTSBBSSSBH-HHHHHHHHTTTSCEEEEECSSCEEEEEEEEGGGHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCH-HHHHHHHHHHCCCEEEEECCCEEEEEEEECHHHHHHHHHHHHHHH
T ss_conf 9982345788999886799999986279899999-999999998488120243565699999964877999999999998
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHCCCCHHHHHHHHHHHCCC
Q ss_conf 07899925799999899999985019979999999983089999998677675330000420591289999999982068
Q 001730 183 ISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQ 262 (1019)
Q Consensus 183 ~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~ 262 (1019)
.+|.|+++++++|++++.+|++...++|..++.+.+...+|++|||+++..|+.++|.+ ++.++|++||++||+
T Consensus 107 ~~p~f~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~------it~~~l~~f~~~~y~ 180 (421)
T 3hdi_A 107 FHSTFQKEELEKERKVVFEEIKMVDDTPDDIVHDLLSSATYGKHSLGYPILGTVETLNS------FNEGMLRHYMDRFYT 180 (421)
T ss_dssp HSBCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTSGGGSCTTCCHHHHHH------CCHHHHHHHHHHHSS
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH------CCHHHHHHHHHHHCC
T ss_conf 68999989999999999999987568888999999999824899999988689899975------999999999998448
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHCCHH
Q ss_conf 78709999849999999999998702445898889876545433444408999863665369999964897133203919
Q 001730 263 GGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSE 342 (1019)
Q Consensus 263 p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~ 342 (1019)
|+||+|+++||++ +++.++++++|+.||....+.+ . ..+... +..+......++..+.++|+.+...+ .+..++
T Consensus 181 p~n~~l~v~Gd~~-~~~~~~v~~~f~~~~~~~~~~~-~--~~~~~~-~~~~~~~~~~~q~~v~~~~~~~~~~~-~d~~~l 254 (421)
T 3hdi_A 181 GDYVVISVAGNVH-DELIDKIKETFSQVKPTTYNYQ-G--EKPMFL-PNRIVRKKETEQAHLCLGYPGLPIGD-KDVYAL 254 (421)
T ss_dssp TTTEEEEEEESCC-HHHHHHHHHHTTSSCCCCCCCC-C--CCCCCC-CCEEEEECCCSEEEEEEEEECCCTTC-TTHHHH
T ss_pred CCCEEEEEEECCC-HHHHHHHHHHHCCCCCCCCCCC-C--CCCCCC-CCEEEECCCCCCEEEEEEEECCCCCC-CHHHHH
T ss_conf 4667999980887-9999999998368888888878-8--988778-85388607888458999976699898-169999
Q ss_pred HHHHHHHCCCCCCCHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999844899980899998-56863400011167778876530189999991912241099999999999999997299
Q 001730 343 DYLAHLLGHEGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSP 421 (1019)
Q Consensus 343 ~~l~~iL~~~~~~~L~~~Lr-~~gl~y~i~~~~~~~~~~~~~~~g~~~i~~~~~~~g~~~~~~v~~~i~~~l~~l~~~~i 421 (1019)
.+++.+||++..++|++.|| ++|++|+++++.... .+ .|.|.+++.+.+ ++++++++.+.++++++++.|+
T Consensus 255 ~vl~~iLgg~~~srL~~~lRe~~glay~~~s~~~~~-~~----~g~~~i~~~~~~---~~~~~~~~~i~~~l~~l~~~~~ 326 (421)
T 3hdi_A 255 VLLNNVLGGSMSSRLFQDIREKRGLCYSVFSYHSSF-RD----SGMLTIYAGTGH---DQLDDLVYSIQETTSALAEKGL 326 (421)
T ss_dssp HHHHHHHTSSSSSHHHHHHTTTTCCCSCEEEEEEEC-SS----CEEEEEEEEEEG---GGHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEECCC-CC----CCEEEEEEEECH---HHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999679963279999987359779999751466-78----836999998088---7899999999999999985799
Q ss_pred CHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHC-CCCCCEEEEEEECC
Q ss_conf 148999996500232213568990799999998546-8995442223533657979999999840-49576199998179
Q 001730 422 QKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLL-IYPAEHVIYGEYMYEVWDEEMIKHLLGF-FMPENMRIDVVSKS 499 (1019)
Q Consensus 422 ~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~l~~~~~i~~~t~e~i~~~~~~-l~~~~~~i~i~~p~ 499 (1019)
++++++++|+.+..++....+ ++...+..++.... .............++++|++||++++++ + +++..++++||.
T Consensus 327 t~~el~~ak~~l~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~~~-~~~~~~~vvgp~ 404 (421)
T 3hdi_A 327 TEKELENGKEQLKGSLMLSLE-STNSRMSRNGKNELLLKKHRSLDEMIEQINAVQKQDVSRLAKILL-SASPSISLINAN 404 (421)
T ss_dssp CHHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHTSCCCCHHHHHHHHHHCCHHHHHHHHHHHT-TSCCEEEEEESS
T ss_pred CHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHC-CCCCEEEEECCH
T ss_conf 999999999999999987068-999999999999996699899999999997089999999999970-527589998750
Q ss_pred C
Q ss_conf 7
Q 001730 500 F 500 (1019)
Q Consensus 500 ~ 500 (1019)
.
T Consensus 405 ~ 405 (421)
T 3hdi_A 405 G 405 (421)
T ss_dssp C
T ss_pred H
T ss_conf 0
No 8
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ...
Probab=1.00 E-value=1 Score=423.76 Aligned_cols=412 Identities=13% Similarity=0.080 Sum_probs=345.4
Q ss_pred CCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 96864562178936898899996799997877543358976553344674566533554334444011210145655544
Q 001730 17 SPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQT 96 (1019)
Q Consensus 17 ~~~~~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (1019)
+....+.++..+|+||++|++.+++. +
T Consensus 7 ~~~~~~~~~~~~L~NGl~v~~~~~~~---------------~-------------------------------------- 33 (446)
T 1pp9_A 7 ALQSVPETQVSQLDNGLRVASEQSSQ---------------P-------------------------------------- 33 (446)
T ss_dssp HHTTSCCCEEEECTTCCEEEEEECSC---------------S--------------------------------------
T ss_pred CCCCCCCCEEEECCCCCEEEEEECCC---------------C--------------------------------------
T ss_conf 21156674599999998899996799---------------8--------------------------------------
Q ss_pred CEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHH
Q ss_conf 42589999277788899999983499987600597679990079999995499610564799259999829222999999
Q 001730 97 KKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALM 176 (1019)
Q Consensus 97 ~~~~~~l~~~~Gs~~ep~~~~Glahllehllf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~d~t~~~~~~~~~~l~~~L~ 176 (1019)
.+.+.+++++|+.+||.+..|+||++|||+|+||++|+. .++.+.++.+||.+||+|+.++|.|++++++++++.+|+
T Consensus 34 -~~~~~l~~~~Gs~~e~~~~~Glahllehmlf~GT~~~~~-~~~~~~l~~~G~~~na~t~~d~t~~~~~~~~~~l~~~l~ 111 (446)
T 1pp9_A 34 -TCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPG-NALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVE 111 (446)
T ss_dssp -EEEEEEEESCSGGGCCTTTTTHHHHHHHHTTSCBSSSTT-THHHHHHHHTTCEEEEEECSSCEEEEEEEEGGGHHHHHH
T ss_pred -EEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCH-HHHHHHHHHCCCEEEEEECCCEEEEEEEECHHHHHHHHH
T ss_conf -799999975304889999873899999975178999998-999999997099799997687699999925788999999
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHCCCCHHHHHHHH
Q ss_conf 99961007899925799999899999985019979999999983089999998677675330000420591289999999
Q 001730 177 RFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKL 256 (1019)
Q Consensus 177 ~l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f 256 (1019)
++++++.+|.|+++++++|++++.+|++...+++..++.+.+...+|++|||+++..|+.++|.+ ++.++|++|
T Consensus 112 ll~d~~~~p~f~~~~~~~ek~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~------~~~~~l~~f 185 (446)
T 1pp9_A 112 LLADIVQNCSLEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRK------LSRADLTEY 185 (446)
T ss_dssp HHHHHHHHBCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTSGGGSCSSCCHHHHHH------CCHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH------CCHHHHHHH
T ss_conf 99999857999989999999999999986342888999999999862899999998588899974------799999999
Q ss_pred HHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHH
Q ss_conf 98206878709999849999999999998702445898889876545433444408999863665369999964897133
Q 001730 257 YMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQE 336 (1019)
Q Consensus 257 ~~~~y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~ 336 (1019)
|++||+|+||+|+++||++++++.++++++|+.|+....+.....+..+.+..+......+..+++.+.++|+.+...+.
T Consensus 186 ~~~~y~p~n~~l~v~Gd~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 265 (446)
T 1pp9_A 186 LSRHYKAPRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQICHREDGLPLAHVAIAVEGPGWAHP 265 (446)
T ss_dssp HHHHCCGGGEEEEEEESCCHHHHHHHHHHHHTTSCSCCCSSCCCCCCCCCCCCEEEEEEETTSSSEEEEEEEEECCTTCT
T ss_pred HHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCC
T ss_conf 99446788779999808999999999999823688888877666677888789658970588540589999734899995
Q ss_pred HHCCHHHHHHHHHCC---------CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHCHHHHHH
Q ss_conf 203919999998448---------99980899998568634000111677788765301899999919122410999999
Q 001730 337 YLKKSEDYLAHLLGH---------EGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIG 407 (1019)
Q Consensus 337 ~~~~~~~~l~~iL~~---------~~~~~L~~~Lr~~gl~y~i~~~~~~~~~~~~~~~g~~~i~~~~~~~g~~~~~~v~~ 407 (1019)
+..++.+++.+||+ +..++|+..||++|++|+++++.... .+ .|.|.+++.+.+ ++++++++
T Consensus 266 -d~~al~vl~~iLg~~~~~~~~g~~~~srL~~~lr~~glay~~~s~~~~~-~~----~g~~~i~~~~~~---~~~~~~~~ 336 (446)
T 1pp9_A 266 -DNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATNKLCQSFQTFNICY-AD----TGLLGAHFVCDH---MSIDDMMF 336 (446)
T ss_dssp -HHHHHHHHHHHHCEEETTCSCGGGCSSHHHHHHHHHTCCSEEEEEEEEC-SS----CEEEEEEEEECT---TSHHHHHH
T ss_pred -CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCC-CC----CEEEEEEEEECH---HHHHHHHH
T ss_conf -0999999999819986457888987779999998649838998850567-78----769999999778---77999999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHC-
Q ss_conf 9999999999729914899999650023221356899079999999854-68995442223533657979999999840-
Q 001730 408 FVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNL-LIYPAEHVIYGEYMYEVWDEEMIKHLLGF- 485 (1019)
Q Consensus 408 ~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~l~~~~~i~~~t~e~i~~~~~~- 485 (1019)
.+.+++++++. ++++++++++|.....++....+ ++...+..++..+ ....+.+.......+.++|+++|++++++
T Consensus 337 ~i~~~l~~l~~-~~t~~el~~ak~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~vt~edv~~~a~~~ 414 (446)
T 1pp9_A 337 VLQGQWMRLCT-SATESEVLRGKNLLRNALVSHLD-GTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKY 414 (446)
T ss_dssp HHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHTSSCCCHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 99999999864-69999999999999999988058-89999999999999738989999999999739999999999997
Q ss_pred CCCCCEEEEEEECCC
Q ss_conf 495761999981797
Q 001730 486 FMPENMRIDVVSKSF 500 (1019)
Q Consensus 486 l~~~~~~i~i~~p~~ 500 (1019)
+.+++..++++||..
T Consensus 415 ~~~~~~~~~~~g~~~ 429 (446)
T 1pp9_A 415 FYDQCPAVAGFGPIE 429 (446)
T ss_dssp TTTCCCEEEEEESCT
T ss_pred CCCCCCEEEEECCCC
T ss_conf 388886799988744
No 9
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B*
Probab=1.00 E-value=1 Score=414.74 Aligned_cols=408 Identities=14% Similarity=0.107 Sum_probs=344.2
Q ss_pred CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEE
Q ss_conf 56217893689889999679999787754335897655334467456653355433444401121014565554442589
Q 001730 22 RLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAA 101 (1019)
Q Consensus 22 ~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (1019)
..++..+|+||++|++++++.. + .+.+
T Consensus 5 ~~~~~~~L~NGl~v~~~~~~~~--------------~---------------------------------------~~~~ 31 (443)
T 1hr6_B 5 PGTRTSKLPNGLTIATEYIPNT--------------S---------------------------------------SATV 31 (443)
T ss_dssp CCCEEEECTTSCEEEEEECSSC--------------S---------------------------------------EEEE
T ss_pred CCCEEEECCCCCEEEEEECCCC--------------C---------------------------------------EEEE
T ss_conf 8745899899888999977999--------------8---------------------------------------7999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHH
Q ss_conf 99927778889999998349998760059767999007999999549961056479925999982922299999999961
Q 001730 102 AMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQF 181 (1019)
Q Consensus 102 ~l~~~~Gs~~ep~~~~Glahllehllf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~d~t~~~~~~~~~~l~~~L~~l~~~ 181 (1019)
.+++++|+..||.+..|+||++|||+|+||++++. .++.+.++.+|+.+||+|+.++|.|++++++++++.+|++++++
T Consensus 32 ~~~~~~Gs~~e~~~~~G~ah~le~~~~~Gt~~~~~-~~l~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~l~ll~d~ 110 (443)
T 1hr6_B 32 GIFVDAGSRAENVKNNGTAHFLEHLAFKGTQNRPQ-QGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDI 110 (443)
T ss_dssp EEEEECSGGGCCTTTTTHHHHHHHHTTSBBSSCBH-HHHHHHHHHTTCEEEEEECSSEEEEEEEEEGGGHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH-HHHHHHHHHCCCEEEEEECCCEEEEEEEECHHHHHHHHHHHHHH
T ss_conf 99985113789999876899999875058889998-99999999759967899878768999996477799999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHCCCCHHHHHHHHHHHCC
Q ss_conf 00789992579999989999998501997999999998308999999867767533000042059128999999998206
Q 001730 182 FISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYY 261 (1019)
Q Consensus 182 ~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y 261 (1019)
+.+|.|+++++++|++++.+|++...+++..++.+.+...+|++|||+++..|+.++|.+ ++.++|++||++||
T Consensus 111 ~~~p~f~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~------~~~~~l~~f~~~~y 184 (443)
T 1hr6_B 111 LTKSVLDNSAIERERDVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKS------ITRTDLKDYITKNY 184 (443)
T ss_dssp HHSBCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTSGGGSCSSCCHHHHHH------CCHHHHHHHHHHHC
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH------CCHHHHHHHHHHCC
T ss_conf 857899999999999999999984127848899999999734799898888389999964------89999999999447
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHC
Q ss_conf 87870999984999999999999870244589888987654--5433444408999863665369999964897133203
Q 001730 262 QGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTV--EGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLK 339 (1019)
Q Consensus 262 ~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 339 (1019)
+|+||+++++||++++++.++++++|+.||....+.+.... +.+.+..+......+..+++.+.++|+.+.... .+.
T Consensus 185 ~~~n~~l~v~Gd~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~ 263 (443)
T 1hr6_B 185 KGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVFCRGERFIKENTLPTTHIAIALEGVSWSA-PDY 263 (443)
T ss_dssp CGGGEEEEEEESCCHHHHHHHHHHHHTTSCCCSSCCCTTSCCSSCCCCCCEEEEEECTTCSEEEEEEEEECCCTTC-TTH
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCC-CCH
T ss_conf 6777799998599999999999998357998888877654557888877876874268855058999970599999-418
Q ss_pred CHHHHHHHHHCC---------CCCCCHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC--HHHHHCHHHHHH
Q ss_conf 919999998448---------99980899998-568634000111677788765301899999919--122410999999
Q 001730 340 KSEDYLAHLLGH---------EGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLT--DSGLEKIFDIIG 407 (1019)
Q Consensus 340 ~~~~~l~~iL~~---------~~~~~L~~~Lr-~~gl~y~i~~~~~~~~~~~~~~~g~~~i~~~~~--~~g~~~~~~v~~ 407 (1019)
.++.+++.+||+ +..++|+..|| ++|++|++++..... .+ .|.|.+++.+. + ++++++++
T Consensus 264 ~~l~vl~~iLg~~~r~~~~g~~~~s~L~~~lre~~glay~~~~~~~~~-~~----~g~~~i~~~~~~~~---~~~~~~~~ 335 (443)
T 1hr6_B 264 FVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSY-AD----SGLWGMYIVTDSNE---HNVRLIVN 335 (443)
T ss_dssp HHHHHHHHHHCEEETTTBCSSSSCCHHHHHHHSTTCSCSEEEEEEEEC-SS----CEEEEEEEEEETTT---CCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCC-CC----CEEEEEEEEECCCH---HHHHHHHH
T ss_conf 999999998089865578888866689999998709748998652477-77----62799999826876---67999999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHC-
Q ss_conf 9999999999729914899999650023221356899079999999854-68995442223533657979999999840-
Q 001730 408 FVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNL-LIYPAEHVIYGEYMYEVWDEEMIKHLLGF- 485 (1019)
Q Consensus 408 ~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~l~~~~~i~~~t~e~i~~~~~~- 485 (1019)
.+.+++++++..++++++++++|.....++....+ ++..++..++..+ ....+.+.......+.++|+++|++++++
T Consensus 336 ~~~~~l~~l~~~~~t~~el~~ak~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~vt~~dv~~~a~~~ 414 (443)
T 1hr6_B 336 EILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLD-GSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYR 414 (443)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHHHHSSCCCHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99999999753898999999999999999997268-99999999999998548868999999999728999999999998
Q ss_pred CCCCCEEEEEEECC
Q ss_conf 49576199998179
Q 001730 486 FMPENMRIDVVSKS 499 (1019)
Q Consensus 486 l~~~~~~i~i~~p~ 499 (1019)
+.+++..+++++|.
T Consensus 415 l~~~~~~~~v~g~~ 428 (443)
T 1hr6_B 415 LQNKPVSMVALGNT 428 (443)
T ss_dssp SSSCCEEEEEEECG
T ss_pred HCCCCCEEEEECCC
T ss_conf 26688679998873
No 10
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A*
Probab=1.00 E-value=1 Score=407.54 Aligned_cols=403 Identities=11% Similarity=0.068 Sum_probs=338.0
Q ss_pred CCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEE
Q ss_conf 45621789368988999967999978775433589765533446745665335543344440112101456555444258
Q 001730 21 KRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAA 100 (1019)
Q Consensus 21 ~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (1019)
...++..+|+||++|++.+++. + .+.
T Consensus 3 ~~~~~~~~L~NGl~v~~~~~~~---------------~---------------------------------------~~~ 28 (475)
T 1hr6_A 3 TDNFKLSSLANGLKVATSNTPG---------------H---------------------------------------FSA 28 (475)
T ss_dssp TTCCEEEECTTSCEEEEESCCC---------------S---------------------------------------SEE
T ss_pred CCCCEEEECCCCCEEEEEECCC---------------C---------------------------------------EEE
T ss_conf 8884699878998899984899---------------8---------------------------------------799
Q ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHH
Q ss_conf 99992777888999999834999876005976799900799999954996105647992599998292229999999996
Q 001730 101 AAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQ 180 (1019)
Q Consensus 101 ~~l~~~~Gs~~ep~~~~Glahllehllf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~d~t~~~~~~~~~~l~~~L~~l~~ 180 (1019)
+.+++++|+++||++..|+||++|||+|+||++++. .++.+.++..|+.+||+|+.|+|+|++++++++++.+|+++++
T Consensus 29 ~~l~~~~Gs~~e~~~~~Glah~lehm~f~Gt~~~~~-~~~~~~le~~G~~~na~t~~d~t~y~~~~~~~~l~~~l~ll~d 107 (475)
T 1hr6_A 29 LGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVEG-RAMAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSE 107 (475)
T ss_dssp EEEEESCCGGGCTTTTTTHHHHHHHTTTSCBTTBCH-HHHHHHHHHTTSCEEEEECSSCEEEEEEECGGGHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH-HHHHHHHHHCCCEEEEEECCCEEEEEEEECHHHHHHHHHHHHH
T ss_conf 999982136788999875999999998378999999-9999999982997887974673999998057889999999999
Q ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHCCCCHHHHHHHHHHHC
Q ss_conf 10078999257999998999999850199799999999830899999986776753300004205912899999999820
Q 001730 181 FFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNY 260 (1019)
Q Consensus 181 ~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~ 260 (1019)
++.+|.|++++|++|++++.+|++...++|..++.+.+..++|++|||+++..|+.++|.+ ++.++|++||++|
T Consensus 108 ~~~~p~f~~~~~~~er~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~------it~~~l~~f~~~~ 181 (475)
T 1hr6_A 108 TVRFPKITEQELQEQKLSAEYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRGLIPS------ISKYYLLDYRNKF 181 (475)
T ss_dssp HHHCBCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTSGGGSCSSCCGGGGGG------CCHHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH------CCHHHHHHHHHHH
T ss_conf 9848899999999999999999987654988999999999854899999987389899844------6999999999973
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE------ECCCCCEEEEEEECCCCC
Q ss_conf 68787099998499999999999987024458988898765454334444089998------636653699999648971
Q 001730 261 YQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLE------AVKDVHILDLTWTLPCLH 334 (1019)
Q Consensus 261 y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~i~~~~~~~~ 334 (1019)
|+|+||+++++| +++++++++++++|+.|+....+... +.+.+..+ ...+. ...+++.+.++|+.++..
T Consensus 182 y~p~n~~l~v~G-~d~~~~~~~i~~~f~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 256 (475)
T 1hr6_A 182 YTPENTVAAFVG-VPHEKALELTGKYLGDWQSTHPPITK---KVAQYTGG-ESCIPPAPVFGNLPELFHIQIGFEGLPID 256 (475)
T ss_dssp CCGGGEEEEEES-SCHHHHHHHHHHHHTTCCCCCCCCCC---CCCCCCCE-EEEECCCCCCSSSCCCEEEEEEEECCCTT
T ss_pred CCCCCEEEEEEC-CCHHHHHHHHHHHHCCCCCCCCCCCC---CCCCCCCC-EEEEECCCCCCCCCCCEEEEEEEECCCCC
T ss_conf 895458999937-88999999999983568888887778---88887687-69995555567886514999999658999
Q ss_pred HHHHCCHHHHHHHHHCCC-----------CCCCHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHCH
Q ss_conf 332039199999984489-----------9980899998-5686340001116777887653018999999191224109
Q 001730 335 QEYLKKSEDYLAHLLGHE-----------GRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKI 402 (1019)
Q Consensus 335 ~~~~~~~~~~l~~iL~~~-----------~~~~L~~~Lr-~~gl~y~i~~~~~~~~~~~~~~~g~~~i~~~~~~~g~~~~ 402 (1019)
. .+..++.+++.+||++ +.++|+..|| ++|++|+++++.... .+ .|.|.|++.+.+ +++
T Consensus 257 ~-~d~~~l~vl~~iLg~~~~f~~gg~g~~~~s~L~~~lr~~~gl~y~v~s~~~~~-~~----~g~~~i~~~~~~---~~~ 327 (475)
T 1hr6_A 257 H-PDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYFVENCVAFNHSY-SD----SGIFGISLSCIP---QAA 327 (475)
T ss_dssp C-TTHHHHHHHHHHHCEEESSCCSSTTSCTTSHHHHHTTTTCSSEEEEEEEEEEC-SS----CEEEEEEEEECG---GGH
T ss_pred C-CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCC-CC----CCEEEEEEEECH---HHH
T ss_conf 9-66899999999968996555678887757789999998648706999740566-78----845999999678---889
Q ss_pred HHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCHHH
Q ss_conf 9999999999999997---299148999996500232213568990799999998546-899544222353365797999
Q 001730 403 FDIIGFVYQYIKLLRQ---VSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLL-IYPAEHVIYGEYMYEVWDEEM 478 (1019)
Q Consensus 403 ~~v~~~i~~~l~~l~~---~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~l~~~~~i~~~t~e~ 478 (1019)
+++++.+.++++++++ +++++++++++|+.+..++....+ +....+..++..+. ...+.+.......++++|+++
T Consensus 328 ~~~~~~~~~~l~~l~~~~~~~~t~~El~~ak~~l~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~vt~~d 406 (475)
T 1hr6_A 328 PQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLE-SKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDD 406 (475)
T ss_dssp HHHHHHHHHHHHTTTTCTTSCCCHHHHHHHHHHHHHHHHHHTT-SHHHHHHHHHHHHHHHSCCCCHHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH
T ss_conf 9999999999999973047998999999999999999998479-899999999999996599899999999997589999
Q ss_pred HHHHHHC-CCC---------CCEEEEEEECC
Q ss_conf 9999840-495---------76199998179
Q 001730 479 IKHLLGF-FMP---------ENMRIDVVSKS 499 (1019)
Q Consensus 479 i~~~~~~-l~~---------~~~~i~i~~p~ 499 (1019)
|++++++ +.+ +++.++++||.
T Consensus 407 v~~~a~~~l~~~~~~~~~~~~~~~~~v~g~~ 437 (475)
T 1hr6_A 407 ISRVAEMIFTGNVNNAGNGKGRATVVMQGDR 437 (475)
T ss_dssp HHHHHHHHHTTCCCCTTCCCCCCEEEEESCG
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
T ss_conf 9999999864104432246788379998884
Done!