BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001731
(1019 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255550546|ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
gi|223544553|gb|EEF46070.1| ATP binding protein, putative [Ricinus communis]
Length = 1109
Score = 1341 bits (3470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 715/1012 (70%), Positives = 811/1012 (80%), Gaps = 18/1012 (1%)
Query: 12 DGPKFSDITVFDSPPKAKTVSENDNYKGGNEIRDILNDLSARLEILSIDKRRVPKTVDPE 71
D P F+DIT FDSP +K ++ + K NEI DIL+DLS+RL++LSI+K+R VD
Sbjct: 104 DEPSFADITDFDSPLPSKAMAGGKSNKDANEIMDILDDLSSRLDLLSIEKKR---GVDKA 160
Query: 72 DDFSRLVKNGDTGQGSKGNLPEYASAESSFSLTSDLSDSSSGVTKDNVGGVVESVADEYE 131
D + G G+ K +LPEYASA S S SS V +++ G ES D+Y+
Sbjct: 161 PDGPSELLPGRDGE-KKTDLPEYASA-GSSFSDIYDSSDSSSVLSNSIDGGPESFVDKYD 218
Query: 132 ES------KGDDVADEEQETENVGIGLK-RNEPRWVDNNLVSARESFESNLDGEEDGGSL 184
ES + D AD E GL N+ R VD+ LV+ SF SN++ EED +L
Sbjct: 219 ESQFLSKSRCDHFADNVHENNKNSRGLNMENKYRGVDDKLVAVGNSFVSNIEEEEDETNL 278
Query: 185 -SEVEGDEHLSRVHETKKHHQRQKKNEPKRVHDGERFNGQSFVSGGREEYDDEDD-CVIV 242
SE E + ++R ET K R K N+ KRVH+ R G+S VS R E DD+++ C+++
Sbjct: 279 RSESECESRVTRERETNKGTHRLKDNDSKRVHERSRVAGRSSVSILRNEEDDDEEDCLVL 338
Query: 243 SGKLVVNRPDRRDGKLNKSAH-SGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIG 301
S K VV + GK + + S +++LDD +DDSVL+D GSITLSGPRST+ LP KI
Sbjct: 339 SRKKVVEEAGKLGGKNKEPCNLSSPIDLLDDDTDDSVLDDGGSITLSGPRSTFELPSKIA 398
Query: 302 NMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPK 361
ML+PHQR+GL+WLWSLHC GKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPK
Sbjct: 399 TMLYPHQRDGLKWLWSLHCLGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPK 458
Query: 362 TLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRG 421
TLL+HWIKEL AVGLS K REYFGT +K RQYELQY+LQDKG+LLTTYDIVRNNSKSLRG
Sbjct: 459 TLLAHWIKELAAVGLSRKTREYFGTSLKARQYELQYILQDKGILLTTYDIVRNNSKSLRG 518
Query: 422 SSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKEL 481
+ +DE +D WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKEL
Sbjct: 519 DDYFADEESEDGYTWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKEL 578
Query: 482 WALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRR 541
W LFNF CP LLGD FK+KYE PILRGN+K+A REK +GS +AKELRERIQPYFLRR
Sbjct: 579 WTLFNFSCPNLLGDYNGFKKKYEHPILRGNEKNASAREKHVGSTIAKELRERIQPYFLRR 638
Query: 542 LKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTI 601
LKNEVF EDD+T +ATLSKKNEMIVWLRLTSCQR+LY AFL SE+VLSAFDGSPLAALTI
Sbjct: 639 LKNEVFKEDDLT-TATLSKKNEMIVWLRLTSCQRELYRAFLQSELVLSAFDGSPLAALTI 697
Query: 602 LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISC 661
LKKICDHPLLLTKRAAEDVL+GMD ++PEDA LAEKLA+H+ADVAEK +FQE+HDNISC
Sbjct: 698 LKKICDHPLLLTKRAAEDVLEGMD-FISPEDAGLAEKLALHVADVAEKAEFQEKHDNISC 756
Query: 662 KISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVN 721
KISFI+SLLD LIPEGHNVLIFSQ+RKMLNLIQ+S+ S GY+FLRIDGTTKASDRVKIVN
Sbjct: 757 KISFIMSLLDNLIPEGHNVLIFSQSRKMLNLIQDSLASNGYEFLRIDGTTKASDRVKIVN 816
Query: 722 DFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 781
DFQEG APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ+KDV+V
Sbjct: 817 DFQEGVGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQRKDVLV 876
Query: 782 YRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQ 841
YRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLREL SLPKQGFD+SLTQQ
Sbjct: 877 YRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELFSLPKQGFDISLTQQ 936
Query: 842 QLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVVQEEEEATRRKGTA 901
QLHEEH QH MDESLE H+ FL+ LGIAGVSHHSLLFSKTA VQVV EEE R K TA
Sbjct: 937 QLHEEHDHQHKMDESLETHVNFLERLGIAGVSHHSLLFSKTAPVQVVNIEEEEMRDKVTA 996
Query: 902 FVGNSSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISN 961
FVGNSS + V RNVDGA YA NP+D+KLNKKS SP+N KL ES+IKERI RLSQL+ N
Sbjct: 997 FVGNSSRT-TVERNVDGAVYALNPKDVKLNKKSCSPENVGKLTESEIKERISRLSQLLGN 1055
Query: 962 KVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPEPGVIDLDDVTGKLQRGL 1013
TV RLPD+G KLQKQI++LN EL+KI MEK + VIDLDD+TG+LQR L
Sbjct: 1056 MATVSRLPDRGAKLQKQISDLNLELDKINMEKSTKEEVIDLDDLTGELQRAL 1107
>gi|224093501|ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222852831|gb|EEE90378.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1108
Score = 1326 bits (3432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/1024 (68%), Positives = 813/1024 (79%), Gaps = 45/1024 (4%)
Query: 6 SRAVIDDGPKFSDITVFDSPPKAKTVSENDNYKGGNEIRDILNDLSARLEILSIDKRRVP 65
SR + D F DI FDSP +K+V + N KG NEI+DIL+DL++RL++LSI+K+RVP
Sbjct: 112 SREEVKDDSSFDDIADFDSPIPSKSVGDCGNNKGVNEIKDILSDLTSRLDLLSIEKKRVP 171
Query: 66 KTVDPEDDFSRLVKNGDTGQGSKGNLPEYASAESSFSLTSDLSDSSSGVTKDNVGGVVES 125
+ K ++ EYASAES FSL+S SDSS V K N GG ES
Sbjct: 172 EN---------------NNVVKKVHVVEYASAESLFSLSSSPSDSSLDVIK-NGGGDDES 215
Query: 126 VADEYEESKGDDVADEEQETENVGIGLKRNEPRWVDNNLVSARESFESNLDGEEDGGSLS 185
DEYEE GD ++ E + V GLK+NE VD LV + F SN+ +E +
Sbjct: 216 AVDEYEE--GDLLS--ESFDDEVSRGLKKNEYGRVDEKLVPVGKPFVSNVVEDESDVQI- 270
Query: 186 EVEGDEHLSRVHETKKHHQRQKKNEPKRVHDGERFNGQSFVSGGREEYDDEDD-CVIVSG 244
E DE+++RV +TK QR K+NEP ++ R G+S V R+E +D++D CV+++G
Sbjct: 271 ESNHDEYVTRVEKTKNVTQRVKENEPDGFNERLRSVGRSSVLSLRDESEDDEDDCVVLTG 330
Query: 245 KLVVNRPDRRDGKLNKSAHSGLVNVLDDYSDDSVLE------DEGSITLSGPRSTYMLPG 298
K VV + R G + K NVL S+ +VLE D+GSI L G +STY LPG
Sbjct: 331 KKVVKKVGR-PGAIAK------YNVLSGESETAVLENHAESEDDGSIILPGLKSTYKLPG 383
Query: 299 KIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVV 358
KI ML+PHQ EGLRWLWSLHC+GKGGILGDDMGLGKTMQIC FLAGLFHS+LIKR LVV
Sbjct: 384 KIAKMLYPHQCEGLRWLWSLHCKGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRVLVV 443
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
APKTLL+HWIKEL+ VGLS K REYFGT +K R YELQY+LQDKG+LLTTYDIVRNNSKS
Sbjct: 444 APKTLLTHWIKELSVVGLSGKTREYFGTSLKARDYELQYILQDKGILLTTYDIVRNNSKS 503
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNL 478
LRG + DE +D IWDYMILDEGHLIKNPSTQRAKSL+EIPSAH I+ISGTPIQNNL
Sbjct: 504 LRGDHYFLDEESEDSYIWDYMILDEGHLIKNPSTQRAKSLIEIPSAHCIVISGTPIQNNL 563
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
KELWALFNFCCP+LLGDNKWFK+ YE PILRGN+K+A DREKRIGS VA ELRERIQPYF
Sbjct: 564 KELWALFNFCCPDLLGDNKWFKQTYEHPILRGNEKNASDREKRIGSTVAMELRERIQPYF 623
Query: 539 LRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQ--------RQLYEAFLNSEIVLSA 590
LRR+KNEVF EDD T+ A LS+KNE+IVWLRLT+CQ RQLYEAFL SEIVLSA
Sbjct: 624 LRRMKNEVFKEDDATT-AKLSRKNEIIVWLRLTTCQQLRPLLCQRQLYEAFLRSEIVLSA 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
FDGSPLAALTILKKICDHPLLLTKRAAED+L+GM+SMLNPED A+AEKLAMH+ADVAE+
Sbjct: 683 FDGSPLAALTILKKICDHPLLLTKRAAEDLLEGMESMLNPEDVAVAEKLAMHVADVAERT 742
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
DFQE+HD+ISCKISF+LSLLD LIPEGHNVLIFSQTRKMLNLI+ES+ S GY+FLRIDGT
Sbjct: 743 DFQEKHDSISCKISFVLSLLDNLIPEGHNVLIFSQTRKMLNLIEESLVSNGYEFLRIDGT 802
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
TK +DR KIV+DFQEG+ APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA
Sbjct: 803 TKVTDRAKIVDDFQEGNGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 862
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLP 830
YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLF+TATE+KEQIRYFSQQDLREL SLP
Sbjct: 863 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFRTATENKEQIRYFSQQDLRELFSLP 922
Query: 831 KQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVVQE 890
KQGF++SLTQQQLHEEH QH MDE LE+HI+FL++ GIAGVSHHSLLFSKT VQ+ QE
Sbjct: 923 KQGFNISLTQQQLHEEHDSQHKMDEYLESHIKFLESQGIAGVSHHSLLFSKTETVQLAQE 982
Query: 891 EEEATRRKGTAFVGNSSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKLKESDIKE 950
EE+ R+K + VGNSSSSY + RNVDGA AFNP+D+ LNKK+SSP + KL ES+I E
Sbjct: 983 EEDEIRKKVSTMVGNSSSSYSLERNVDGAARAFNPKDVNLNKKTSSPDSVGKLTESEILE 1042
Query: 951 RIKRLSQLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPE-PGVIDLDDVTGKL 1009
RI RLSQL+ NKVTV RLPD+G KLQKQI+ELNS L +++MEK E GVI LDD+TG+
Sbjct: 1043 RINRLSQLLGNKVTVLRLPDQGAKLQKQISELNSVLIELRMEKATEREGVISLDDLTGEF 1102
Query: 1010 QRGL 1013
+RGL
Sbjct: 1103 ERGL 1106
>gi|224081014|ref|XP_002306264.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222855713|gb|EEE93260.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1058
Score = 1318 bits (3412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/1022 (68%), Positives = 803/1022 (78%), Gaps = 66/1022 (6%)
Query: 5 ESRAVIDDGPKFSDITVFDSPPKAKTVSENDNYKGGNEIRDILNDLSARLEILSIDKRRV 64
ESR + F I FDSP +K V + DN +G NEI+DILNDL++RL++LSI+KRR+
Sbjct: 88 ESREEVKTDSSFDGIADFDSPIPSKNVGDCDNNRGVNEIKDILNDLTSRLDLLSIEKRRM 147
Query: 65 PKTVDPEDDFSRLVKNGDTGQGSKGNLPEYASAESSFSLTSDLSDSSSGVTKDNVGG--- 121
P+ NG+ + K ++ EYASAESSFS +S SDSSS V K+ V
Sbjct: 148 PE-------------NGNVVK--KVDVVEYASAESSFSSSSGPSDSSSNVNKNFVEAYED 192
Query: 122 ---VVESVADEYEESKGDDVADEEQETENVGIGLKRNEPRWVDNNLVSARESFESNLDGE 178
+ ES ADE + SKG+D+ GLK+NE VD LV +S SN+ E
Sbjct: 193 GHLLSESFADEVD-SKGNDICK----------GLKKNEYGRVDEKLVPVGKSIASNV-VE 240
Query: 179 EDGGSLSEVEGDEHLSRVHETKKHHQRQKKNEPKRVHDGERFNGQSFVSGGREEYDDE-D 237
E+G + D++++RV +T K + KKNEP R H+ R G+S + R+E +D+ D
Sbjct: 241 EEGDVQIVSDRDDYVTRVEKTNKVALKVKKNEPTRFHEKLRSVGRSSLLSLRDEPEDKGD 300
Query: 238 DCVIVSGKLVVNRPDRRDG--KLNK-SAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTY 294
DC +++ K VV + R D K N S S + +VLD+++D ED+ ITL GP+STY
Sbjct: 301 DCEVLTSKKVVKKVGRPDAIAKYNLLSDESSVTDVLDNHADS---EDDSCITLPGPKSTY 357
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR 354
L G I ML+PHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQIC FLAGLFHS+LIKR
Sbjct: 358 KLSGTIAKMLYPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKR 417
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
ALVVAPKTLLSHWIKEL+ VGLSAK REYFGT +K R YELQY+LQDKG+LLTTYDIVRN
Sbjct: 418 ALVVAPKTLLSHWIKELSVVGLSAKTREYFGTSLKARDYELQYILQDKGILLTTYDIVRN 477
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
NSKSLRG + D+ +D IWDYMILDEGHLIKNPSTQRAKSLLEIPSAH I+ISGTPI
Sbjct: 478 NSKSLRGDHYFIDDESEDSYIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHCIVISGTPI 537
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
QNNLKELWALFNFCCP LLGDNKWFKE YE PILRGN+K+A DREKRIGS VAKELRERI
Sbjct: 538 QNNLKELWALFNFCCPGLLGDNKWFKETYEHPILRGNEKNASDREKRIGSTVAKELRERI 597
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS 594
QPYFLRR+KNEVF EDD T +A LS+KNE+IVWLRLT+CQRQLYEAFL SEIVLSAFDGS
Sbjct: 598 QPYFLRRMKNEVFKEDDAT-TAKLSRKNEIIVWLRLTACQRQLYEAFLRSEIVLSAFDGS 656
Query: 595 PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEK--DDF 652
PLAALTILKKICDHPLLLTKRAAED+L+GM+SMLNPEDAA+AEKLAMH+ADVA++ DF
Sbjct: 657 PLAALTILKKICDHPLLLTKRAAEDLLEGMESMLNPEDAAVAEKLAMHLADVADRTDTDF 716
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
QE+HDNISCKISFILSLLD LIPEGHNVLIFSQTRKMLNLIQES+ S GY+F+RIDGTTK
Sbjct: 717 QEKHDNISCKISFILSLLDNLIPEGHNVLIFSQTRKMLNLIQESLVSNGYEFIRIDGTTK 776
Query: 713 ASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYR 772
A+DR KIV+DFQEG+ APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYR
Sbjct: 777 ATDRTKIVSDFQEGNGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYR 836
Query: 773 IGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQ 832
IGQ KDVVVYRLMTCG+VEEKIYRKQIFKGGLF+TATE+KEQIRYFSQQDLREL SLPKQ
Sbjct: 837 IGQMKDVVVYRLMTCGSVEEKIYRKQIFKGGLFRTATENKEQIRYFSQQDLRELFSLPKQ 896
Query: 833 GFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVVQEEE 892
GF++SLTQQQLHEEH QH MDE LE+HI+FL+T GIAGVSHHSLLFSKTA VQV QEEE
Sbjct: 897 GFNISLTQQQLHEEHDSQHKMDEFLESHIKFLETQGIAGVSHHSLLFSKTATVQVAQEEE 956
Query: 893 EATRRKGTAFVGNSSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKLKESDIKERI 952
+ R A +AFNP+D+ L KKSSSP + KL ES+IKERI
Sbjct: 957 DEIR----------------------AVHAFNPKDVNLKKKSSSPDSVGKLTESEIKERI 994
Query: 953 KRLSQLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPE-PGVIDLDDVTGKLQR 1011
RLSQ++ NKVT+ RLPD+G KLQKQI ELNSELNK++ME E G+I LDD+TG+ +R
Sbjct: 995 NRLSQILGNKVTISRLPDQGAKLQKQIGELNSELNKLRMETATEREGIISLDDLTGEFER 1054
Query: 1012 GL 1013
L
Sbjct: 1055 RL 1056
>gi|225431683|ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
gi|296088517|emb|CBI37508.3| unnamed protein product [Vitis vinifera]
Length = 1043
Score = 1269 bits (3283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/1008 (67%), Positives = 776/1008 (76%), Gaps = 65/1008 (6%)
Query: 14 PKFSDITVFDSPPKAKTVSENDNYKGGNEIRDILNDLSARLEILSIDKRRVPKTVD-PED 72
PKFS+I+ FDSP GGNEIR ILNDLS+RLE LSI+ +R PK D +
Sbjct: 95 PKFSEISDFDSPHHCSNA-------GGNEIRGILNDLSSRLESLSIETKRNPKRADQTRE 147
Query: 73 DFSRLVKNGDTGQGSKGNLPEYASAESSFSLTSDLSDSSSGVTKDNVGGVVESVADEYEE 132
+ + Q K ++PEYASA SSFS+TSD +DSS VG V++V D++E
Sbjct: 148 SLNFAAADVAINQEKKLDVPEYASASSSFSVTSDGADSSPDAAW--VGDGVDNVVDDHE- 204
Query: 133 SKGDDVADEEQETENVGIGLKRNEPRWVDNNLVSARESFESNLDGEEDGGSLSEVEGDEH 192
G +V GS+ +V D
Sbjct: 205 -AGSEV-------------------------------------------GSVHDV--DNF 218
Query: 193 LSRVHETKKHHQRQKKNEPKRVHDGERFNGQSFVSGGREEYDD--EDDCVIVSGKLVVNR 250
+SRVH + H + N +RV+ GQS V EE +D DDCVI+SGK VV
Sbjct: 219 ISRVHGNR--HNGEAANS-RRVNVNSVPMGQSSVCDFEEEEEDGNSDDCVILSGKKVVEA 275
Query: 251 PDRRDGKLNKS-AHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQR 309
R K + S +V+VLDD +D SVLEDE +ITLSGPRSTY LPGKI ML+PHQR
Sbjct: 276 AVSRGSKFKEEYDDSDVVDVLDDCTDGSVLEDESAITLSGPRSTYKLPGKIAKMLYPHQR 335
Query: 310 EGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIK 369
+GL+WLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS L++RA+VVAPKTLLSHWIK
Sbjct: 336 DGLKWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSCLLRRAVVVAPKTLLSHWIK 395
Query: 370 ELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEA 429
EL+AVGLS K REY+GTC KTRQYELQYVLQDKGVLLTTYDIVRNNSKSL G ++ D+
Sbjct: 396 ELSAVGLSEKTREYYGTCTKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLCGGNYFHDKR 455
Query: 430 GDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCC 489
+DD WDYMILDEGHLIKNPSTQRAKSL+EIP AHRI++SGTPIQNNLKELWALF+FCC
Sbjct: 456 SEDDFTWDYMILDEGHLIKNPSTQRAKSLMEIPCAHRIVVSGTPIQNNLKELWALFSFCC 515
Query: 490 PELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHE 549
PELLGD WFK KYE PILRGNDK+A DREK I S VAKELRERIQPYFLRRLKNEVFHE
Sbjct: 516 PELLGDKNWFKVKYESPILRGNDKNASDREKHISSRVAKELRERIQPYFLRRLKNEVFHE 575
Query: 550 DDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTILKKICDHP 609
DD + +A LSKKNE+IVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAA+TILKKICDHP
Sbjct: 576 DDASETAKLSKKNEIIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAAITILKKICDHP 635
Query: 610 LLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSL 669
LLLTKRA EDVL+GMDSMLN ED +A KLAMH+A E+DDF E++DN+S K+SFIL+L
Sbjct: 636 LLLTKRAVEDVLEGMDSMLNQEDLGMASKLAMHLATAYERDDFLEKNDNVSSKMSFILAL 695
Query: 670 LDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVA 729
LD LIPEGHNVLIFSQTRKMLNLI+E + S GYKFLRIDGTTKA+DRVKIVNDFQ+G A
Sbjct: 696 LDTLIPEGHNVLIFSQTRKMLNLIEELLISNGYKFLRIDGTTKANDRVKIVNDFQDGVGA 755
Query: 730 PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGT 789
PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ KDV+VYRLMTCGT
Sbjct: 756 PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTCGT 815
Query: 790 VEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGD 849
+EEKIYRKQIFKGGLF+TATEHKEQ RYFSQQDL+EL SLPK GFDVS+TQQQLHEEH
Sbjct: 816 IEEKIYRKQIFKGGLFRTATEHKEQTRYFSQQDLQELFSLPKHGFDVSVTQQQLHEEHDH 875
Query: 850 QHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVVQEEEEATR--RKGTAFVGNSS 907
QHNMDESL+ HI+FL+T GIAGVSHH+LLFSKTARV VV EEEE R R GT V N S
Sbjct: 876 QHNMDESLKEHIKFLETQGIAGVSHHNLLFSKTARVLVVDEEEEVARASRTGTTSVMNKS 935
Query: 908 SSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISNKVTVER 967
+ ++V+ A+YAF P+++ L+K +SS + KL ES+IK RI RLSQ+++NK TV +
Sbjct: 936 AGSSHEQDVEWAQYAFKPKEVNLHKTNSSADSAGKLTESEIKGRINRLSQILANKATVSK 995
Query: 968 LPDKGTKLQKQIAELNSELNKIKMEKRPEPGVIDLDDVTGKLQRGLFL 1015
LPDKG ++QKQIAELN EL+K++M KR E VIDLDDVTGKL+ L L
Sbjct: 996 LPDKGERIQKQIAELNLELDKMRMTKRIETEVIDLDDVTGKLENVLNL 1043
>gi|356527520|ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
Length = 1030
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/734 (75%), Positives = 635/734 (86%), Gaps = 7/734 (0%)
Query: 280 EDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQI 339
E +GSIT +GPRSTY L KI ML+PHQREGL+WLWSLHC GKGGILGDDMGLGKTMQ+
Sbjct: 302 ETDGSITFTGPRSTYKLQAKIAKMLYPHQREGLKWLWSLHCLGKGGILGDDMGLGKTMQM 361
Query: 340 CGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVL 399
CGFLAGLFHSRLI+R L+VAPKTLL HWIKEL+AVGLS K REYFGT K R+YELQY+L
Sbjct: 362 CGFLAGLFHSRLIRRVLIVAPKTLLPHWIKELSAVGLSEKTREYFGTSTKLREYELQYIL 421
Query: 400 QDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLL 459
QD GVLLTTYDIVRNNSKSL+G+++ DE ++ A WDYMILDEGHLIKNPSTQRAKSLL
Sbjct: 422 QDNGVLLTTYDIVRNNSKSLQGNNYFDDEDNEEGATWDYMILDEGHLIKNPSTQRAKSLL 481
Query: 460 EIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDRE 519
EIPSAHRIIISGTP+QNNLKELWALFNFCCPELLGD+KWFKE++E PILRGNDKHA DRE
Sbjct: 482 EIPSAHRIIISGTPLQNNLKELWALFNFCCPELLGDHKWFKERFENPILRGNDKHASDRE 541
Query: 520 KRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYE 579
KR+GS+VAKELR+RI PYFLRRLK+EVF++DD ++A LS+K E+IVWLRLTS QR LYE
Sbjct: 542 KRVGSSVAKELRDRIHPYFLRRLKSEVFNQDDEKTTAKLSQKQEIIVWLRLTSVQRHLYE 601
Query: 580 AFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKL 639
AFL SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVL+GMDSML PE+A +AEKL
Sbjct: 602 AFLKSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDSMLKPEEANVAEKL 661
Query: 640 AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGS 699
AMHIADVA D F+++ D +SCKISFI+SLLD LIPEGH VLIFSQTRKMLNLIQE + S
Sbjct: 662 AMHIADVAGTDKFKDEQD-VSCKISFIMSLLDNLIPEGHCVLIFSQTRKMLNLIQECLVS 720
Query: 700 KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
+GY FLRIDGTTKA+DR+KIVNDFQEG APIFLLTSQVGGLGLTLT+ADRVIVVDPAWN
Sbjct: 721 EGYDFLRIDGTTKATDRLKIVNDFQEGFGAPIFLLTSQVGGLGLTLTRADRVIVVDPAWN 780
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFS 819
PSTDNQSVDRAYRIGQKKDV+VYRLMTCGTVEEKIYRKQ++KGGLFKTATEHKEQIRYFS
Sbjct: 781 PSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQVYKGGLFKTATEHKEQIRYFS 840
Query: 820 QQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLF 879
QQDLREL SLPK+GFDVS+TQ+QL+EEH QH +D+S AH++FL + IAGVSHHSLLF
Sbjct: 841 QQDLRELFSLPKEGFDVSVTQRQLNEEHDRQHTVDDSFRAHLEFLKSHSIAGVSHHSLLF 900
Query: 880 SKTARVQVVQEEEEATRRKGTAFVGNSSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKN 939
SKTA V+ E++E TR G +VG S S G E+AFNP+D++L+KK SSP +
Sbjct: 901 SKTAPVRTDPEDDEVTRNHGAKYVGTSRSPS-NEHAAYGPEFAFNPKDVRLSKKGSSPSS 959
Query: 940 EAKLKESDIKERIKRLSQLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPEPGV 999
KL ES+IK++IK +SQ +SN + +LPDKG KLQK++AELN EL ++K E+R V
Sbjct: 960 AGKLTESEIKDKIKSISQTLSNMAS--KLPDKGEKLQKRLAELNLELAELKREER---NV 1014
Query: 1000 IDLDDVTGKLQRGL 1013
+DLDD T + QR L
Sbjct: 1015 VDLDDFTTEFQRVL 1028
>gi|297797399|ref|XP_002866584.1| hypothetical protein ARALYDRAFT_496587 [Arabidopsis lyrata subsp.
lyrata]
gi|297312419|gb|EFH42843.1| hypothetical protein ARALYDRAFT_496587 [Arabidopsis lyrata subsp.
lyrata]
Length = 1097
Score = 1152 bits (2981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/1012 (61%), Positives = 744/1012 (73%), Gaps = 38/1012 (3%)
Query: 14 PKFSDITVFDSP-PKAKTVSENDNYKGGNEIRDILNDLSARLEILSIDKRRVPKTVDPED 72
P FS IT F SP P+ K E G NEI DIL+DL+++L +SI K++ D
Sbjct: 114 PNFSIITDFSSPSPQLKQNEEMQGDGGRNEIMDILDDLTSKLGTMSIQKKK--------D 165
Query: 73 DFSRLVKNGDTGQGSKGNLPEYASAESSFSLTSDLSDSSSGVTKDNVGGVVESVADEYEE 132
+ S G G S+ + ++ A+SSFSL SDLS SS +VG + + ++
Sbjct: 166 NQSNDFDGG--GVKSRVDKFDFEDAKSSFSLISDLSQSSL-----DVGTTCSAGVNSLKD 218
Query: 133 SKGD-DVADEEQETENVGIGLKRNEPRWVD---NNLVSARESFESNLDGEEDGGSLSEVE 188
+G+ A E++T N + E R D N S R F+ N + G +L
Sbjct: 219 KQGNAGFAIREEKTSNEFS--RELEERISDVGKQNSYSGRH-FDDNSEYNRQGYNL---- 271
Query: 189 GDEHLSRVHETKKHHQRQKKNEPKRVHDGERFNGQSFVSGGREEYDDEDD-CVIVSGKLV 247
D S+ E K Q K V + R G+S + R+ D+DD CVI+SGK
Sbjct: 272 -DRGKSQRKEEKTMGQSLKTTRHIEVSEKLRTVGRSNAAKLRDLDKDDDDDCVILSGKKA 330
Query: 248 VNRPDRRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPH 307
+ K K A S N D+ LEDEGSITL+G + +Y LPGKI ML+PH
Sbjct: 331 AEMKIHHE-KPKKPARS--YNTERHGYDERSLEDEGSITLTGLKLSYTLPGKIATMLYPH 387
Query: 308 QREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHW 367
QR+GL+WLWSLH QGKGGILGDDMGLGKTMQIC FLAGLFHS+LIKRALVVAPKTLL HW
Sbjct: 388 QRDGLKWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRALVVAPKTLLPHW 447
Query: 368 IKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISD 427
+KEL VGLS REY+GT K R+Y+L ++LQ KGVLLTTYDIVRNN+K+L+G +D
Sbjct: 448 MKELATVGLSKMTREYYGTSTKAREYDLHHILQGKGVLLTTYDIVRNNTKALQGDDHYTD 507
Query: 428 EAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNF 487
E +D WDYMILDEGHLIKNP+TQRAKSLLEIPS+HRIIISGTPIQNNLKELWALFNF
Sbjct: 508 EDDEDGIKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLKELWALFNF 567
Query: 488 CCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVF 547
CP LLGD WFK+ YE ILRG DK+A DRE+RIGS VAK LRE IQP+FLRRLK+EVF
Sbjct: 568 SCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFLRRLKSEVF 627
Query: 548 HEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTILKKICD 607
+D TS LSKK+E++VWLRLT+CQRQLYEAFLNSEIVLSAFDGSPLAALTILKKICD
Sbjct: 628 GDDGATSK--LSKKDEIVVWLRLTACQRQLYEAFLNSEIVLSAFDGSPLAALTILKKICD 685
Query: 608 HPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFIL 667
HPLLLTKRAAEDVL+GMDS L PE+A +AE+LAMHIAD + DDFQ ++D+ISCK+SFI+
Sbjct: 686 HPLLLTKRAAEDVLEGMDSTLTPEEAGVAERLAMHIADNVDTDDFQTKNDSISCKLSFIM 745
Query: 668 SLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGD 727
SLLD LIPEGH VLIFSQTRKMLNLIQ+S+ S GY FLRIDGTTKA DR+K V +FQEG
Sbjct: 746 SLLDNLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGH 805
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ KDV+VYRLMT
Sbjct: 806 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTS 865
Query: 788 GTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEH 847
TVEEKIYRKQ++KGGLFKTATEHKEQIRYFSQQDLREL SLPK GFDVS TQQQL+EEH
Sbjct: 866 ATVEEKIYRKQVYKGGLFKTATEHKEQIRYFSQQDLRELFSLPKGGFDVSPTQQQLYEEH 925
Query: 848 GDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVVQ-EEEEATRRKGTAFVGNS 906
+Q +DE LE+H++FL+TLGIAGVSHHSLLFSKTA +Q +Q +EEE RR+ F G
Sbjct: 926 YNQIKLDEKLESHVKFLETLGIAGVSHHSLLFSKTAPIQAIQKDEEEEIRRETALFSGRP 985
Query: 907 SSSYLVARNVDGAEYAFNPRDIKLNKK-SSSPKNEAKLKESDIKERIKRLSQLISNKVTV 965
S+S ++GA+YAF P+D+ L+KK + SP ++ +L ES+IK R+ RL+ L+ NK TV
Sbjct: 986 SASISQDTVINGADYAFKPKDVNLDKKINISPIDDKELSESEIKARLNRLTILLQNKDTV 1045
Query: 966 ERLPDKGTKLQKQIAELNSELNKIKMEKRPE-PGVIDL-DDVTGKLQRGLFL 1015
RLPD G K+QKQIAEL EL +K +R P VIDL +D++ K+ +GL L
Sbjct: 1046 SRLPDGGAKIQKQIAELTRELKDLKAAERINMPQVIDLEEDISQKMHKGLNL 1097
>gi|22328039|ref|NP_201200.2| protein chromatin remodeling 24 [Arabidopsis thaliana]
gi|18087573|gb|AAL58917.1|AF462829_1 AT5g63950/MBM17_5 [Arabidopsis thaliana]
gi|22655364|gb|AAM98274.1| At5g63950/MBM17_5 [Arabidopsis thaliana]
gi|332010436|gb|AED97819.1| protein chromatin remodeling 24 [Arabidopsis thaliana]
Length = 1090
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/781 (70%), Positives = 639/781 (81%), Gaps = 14/781 (1%)
Query: 239 CVIVSGKLVVNRPDRRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPG 298
C+I+SGK + K+NK A S N D+ LEDEGSITL+G +Y LPG
Sbjct: 320 CLILSGKKAA------EMKINKPARS--YNAKRHGYDERSLEDEGSITLTGLNLSYTLPG 371
Query: 299 KIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVV 358
KI ML+PHQREGL WLWSLH QGKGGILGDDMGLGKTMQIC FLAGLFHS+LIKRALVV
Sbjct: 372 KIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRALVV 431
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
APKTLL HW+KEL VGLS REY+GT K R+Y+L ++LQ KG+LLTTYDIVRNN+K+
Sbjct: 432 APKTLLPHWMKELATVGLSQMTREYYGTSTKAREYDLHHILQGKGILLTTYDIVRNNTKA 491
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNL 478
L+G +DE +D WDYMILDEGHLIKNP+TQRAKSLLEIPS+HRIIISGTPIQNNL
Sbjct: 492 LQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNL 551
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
KELWALFNF CP LLGD WFK+ YE ILRG DK+A DRE+RIGS VAK LRE IQP+F
Sbjct: 552 KELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFF 611
Query: 539 LRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAA 598
LRRLK+EVF +D TS LSKK+E++VWLRLT+CQRQLYEAFLNSEIVLSAFDGSPLAA
Sbjct: 612 LRRLKSEVFGDDGATSK--LSKKDEIVVWLRLTACQRQLYEAFLNSEIVLSAFDGSPLAA 669
Query: 599 LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDN 658
LTILKKICDHPLLLTKRAAEDVL+GMDS L E+A +AE+LAMHIAD + DDFQ ++D+
Sbjct: 670 LTILKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAERLAMHIADNVDTDDFQTKNDS 729
Query: 659 ISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVK 718
ISCK+SFI+SLL+ LIPEGH VLIFSQTRKMLNLIQ+S+ S GY FLRIDGTTKA DR+K
Sbjct: 730 ISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLK 789
Query: 719 IVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKD 778
V +FQEG VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ KD
Sbjct: 790 TVEEFQEGHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKD 849
Query: 779 VVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSL 838
V+VYRLMT TVEEKIYRKQ++KGGLFKTATEHKEQIRYFSQQDLREL SLPK GFDVS
Sbjct: 850 VIVYRLMTSATVEEKIYRKQVYKGGLFKTATEHKEQIRYFSQQDLRELFSLPKGGFDVSP 909
Query: 839 TQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVVQ-EEEEATRR 897
TQQQL+EEH +Q +DE LE+H++FL+TLGIAGVSHHSLLFSKTA +Q +Q +EEE RR
Sbjct: 910 TQQQLYEEHYNQIKLDEKLESHVKFLETLGIAGVSHHSLLFSKTAPIQAIQKDEEEQIRR 969
Query: 898 KGTAFVGNSSSSYLVARNVDGAEYAFNPRDIKLNKK-SSSPKNEAKLKESDIKERIKRLS 956
+ +G +S+S ++GA+YAF P+D+ L+K+ + SP ++ +L ES IK R+ RL+
Sbjct: 970 ETALLLGRASASISQDTVINGADYAFKPKDVNLDKRINISPVDDKELSESVIKARLNRLT 1029
Query: 957 QLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPE-PGVIDL-DDVTGKLQRGLF 1014
L+ NK TV RLPD G K+QKQIAEL EL +K +R P VIDL +D++ K+Q+GL
Sbjct: 1030 MLLQNKGTVSRLPDGGAKIQKQIAELTRELKDMKAAERINMPQVIDLEEDISRKMQKGLN 1089
Query: 1015 L 1015
L
Sbjct: 1090 L 1090
>gi|357520033|ref|XP_003630305.1| DNA excision repair protein ERCC-6-like protein [Medicago truncatula]
gi|355524327|gb|AET04781.1| DNA excision repair protein ERCC-6-like protein [Medicago truncatula]
Length = 1129
Score = 1113 bits (2878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/756 (71%), Positives = 625/756 (82%), Gaps = 11/756 (1%)
Query: 267 VNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGI 326
V VLD + E++GSITL+ PRSTY L KI ML+PHQREGL+WLWSLH +GKGGI
Sbjct: 352 VQVLDHFEP----ENDGSITLNDPRSTYKLQPKIAKMLYPHQREGLKWLWSLHVRGKGGI 407
Query: 327 LGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGT 386
LGDDMGLGKTMQICGFLAGLFHSRLI+R LVVAPKTLL HWIKEL+ VGLS K +EYFG
Sbjct: 408 LGDDMGLGKTMQICGFLAGLFHSRLIRRVLVVAPKTLLPHWIKELSVVGLSEKTKEYFGA 467
Query: 387 CVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
C K R+YELQY+LQDKGVLLTTYDIVRNN+KSL+G + DE +D WDYMILDEGHL
Sbjct: 468 CAKLREYELQYILQDKGVLLTTYDIVRNNTKSLKGHRYFDDEDNEDGPTWDYMILDEGHL 527
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
IKNPSTQRAKSLLEIPSAHRIIISGTP+QNNLKELWALFNFCCP+LLGD KWFK+KYE P
Sbjct: 528 IKNPSTQRAKSLLEIPSAHRIIISGTPLQNNLKELWALFNFCCPDLLGDKKWFKDKYETP 587
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
IL+GNDK+A REK IGS+VAKELR+ IQPYFLRRLK+EVF++D ++A LS+K E+IV
Sbjct: 588 ILKGNDKNASAREKCIGSSVAKELRDHIQPYFLRRLKSEVFNQDTEKTTAKLSQKREIIV 647
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
WLRLT+ QR LYEAFL SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDG++S
Sbjct: 648 WLRLTNVQRHLYEAFLKSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGLES 707
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQT 686
ML PE+ +AEKLAMHIADVAE D F+++HD +SCKI FI+SLLD LIPEGH VLIFSQT
Sbjct: 708 MLKPEEVNVAEKLAMHIADVAETDKFEDKHD-VSCKIVFIMSLLDNLIPEGHRVLIFSQT 766
Query: 687 RKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLT 746
RKMLNLIQE I S+GY FLRIDGTTK+ DR+KIV+DFQ+G APIFLLTSQVGGLGLTLT
Sbjct: 767 RKMLNLIQECITSQGYDFLRIDGTTKSCDRIKIVDDFQDGVGAPIFLLTSQVGGLGLTLT 826
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
+ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDV+VYRLMT GTVEEKIYRKQ++KGGLFK
Sbjct: 827 RADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVIVYRLMTSGTVEEKIYRKQVYKGGLFK 886
Query: 807 TATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDT 866
T +E KEQ RYFSQ+DL+ELLSLPK GFDVS+TQQQL + H QH +D S +AH++FL +
Sbjct: 887 TVSEQKEQTRYFSQKDLKELLSLPKDGFDVSVTQQQLDQTHDSQHIVDASFQAHLEFLKS 946
Query: 867 LGIAGVSHHSLLFSKTARVQ---VVQEEEEATRRKGTAFVGNSSSSYLVARNVDGAEYAF 923
GIAG+SHHSLLFSKT VQ + E + A +SSS + VDGA +AF
Sbjct: 947 QGIAGISHHSLLFSKTEPVQEAPAYEVENNHWKPNPNARYTGTSSSSSHEQVVDGAAFAF 1006
Query: 924 NPRDIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISNKVTVERLPDKGTKLQKQIAELN 983
NP+D+ + KK SSP + KL E +IK+RI RLS ++SN V + +LPD G KL+K+IAELN
Sbjct: 1007 NPKDVNVRKKESSPSSVGKLTELEIKDRIDRLSLMLSNTVMISKLPDNGEKLKKRIAELN 1066
Query: 984 SELNKIKMEKRPEPGVIDLDDVTGKLQRGLFLTQQF 1019
L K+KME+ ++DLDD+ G+ +R L + F
Sbjct: 1067 RALTKLKMEQT---NIVDLDDIAGEFERVLNGVENF 1099
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 85/160 (53%), Gaps = 17/160 (10%)
Query: 6 SRAVIDDGPKF-SDITVFDSP-PKAKTVSENDNYKGGNEIRDILNDLSARLEILSIDKRR 63
S++V DD P F D+ FDSP P K V E + +G N+IRDILN+LS++ + LS++K +
Sbjct: 223 SKSVADDEPTFDGDLVDFDSPIPVWKNVIEIEESRGRNDIRDILNELSSKFDELSVEKTK 282
Query: 64 V-----PKTVDPEDDFSRLVKNGDTGQGSKGNLPEYASAESSFSLTSDLSDSSSGVTKDN 118
PKTV ++ V+ G +G E+ SA SSFS D D SS TK++
Sbjct: 283 PKTVTKPKTVTKPKTVTKPVERGKEIFEDEGL--EFGSAGSSFSPKQDPHDISSKDTKND 340
Query: 119 VGGVVESVADEYEESKGDDVADEEQETENVGIGLKRNEPR 158
GG+ EYE V D E EN G + N+PR
Sbjct: 341 SGGL------EYESDDSVQVLD-HFEPENDG-SITLNDPR 372
>gi|356511188|ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
Length = 938
Score = 1101 bits (2848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/719 (74%), Positives = 619/719 (86%), Gaps = 13/719 (1%)
Query: 274 SDDSVLE-------DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGI 326
+DDSV E ++GSITL+GPRSTY L +I NML+PHQREGL+WLWSLHC GKGGI
Sbjct: 224 ADDSVQELDHFEPENDGSITLTGPRSTYKLQARIANMLYPHQREGLKWLWSLHCLGKGGI 283
Query: 327 LGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGT 386
LGDDMGLGKTMQ+CGFLAGLFHSRLI+RAL+VAPKTLL HWIKEL+AVGLS K REYFGT
Sbjct: 284 LGDDMGLGKTMQMCGFLAGLFHSRLIRRALIVAPKTLLPHWIKELSAVGLSEKTREYFGT 343
Query: 387 CVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
K R+YELQY+LQDKGVLLTTYDIVRNNSKSL+G+++ DE ++ WDYMILDEGHL
Sbjct: 344 STKLREYELQYILQDKGVLLTTYDIVRNNSKSLQGNNYFDDEDNEEGVTWDYMILDEGHL 403
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
IKNPSTQRAKSLLEIPSAH IIISGTP+QNNLKELWALFNFCCPELLGD++WFKE++E P
Sbjct: 404 IKNPSTQRAKSLLEIPSAHCIIISGTPLQNNLKELWALFNFCCPELLGDHEWFKERFENP 463
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRGNDKHA REKR+GS+VAKELR+ I PYFLRRLK+E+F++DD ++ LS+K E+IV
Sbjct: 464 ILRGNDKHASYREKRVGSSVAKELRDCIHPYFLRRLKSEIFNQDDEKTTTKLSQKQEIIV 523
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
WLRLTS QR LYEAFLNS+IVLSA DGSPLAA+TILKKICDHP LLTKRAAE VL+G+DS
Sbjct: 524 WLRLTSVQRHLYEAFLNSKIVLSAIDGSPLAAITILKKICDHPHLLTKRAAEGVLEGIDS 583
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQT 686
ML PE+A +AEKLAMHIADVA KD F+++ D +SCKISFI+SLLD LIPEGH VLIFSQT
Sbjct: 584 MLKPEEANVAEKLAMHIADVAGKDKFKDKQD-VSCKISFIMSLLDNLIPEGHCVLIFSQT 642
Query: 687 RKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLT 746
RKMLNLI+E + S+GY FLRIDGTTKASDR+KIVNDFQEG APIFLLTSQVGGLGLTLT
Sbjct: 643 RKMLNLIEECLVSEGYDFLRIDGTTKASDRLKIVNDFQEGFGAPIFLLTSQVGGLGLTLT 702
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
+ADRVIVVDP+WNPSTDNQSVDRAYRIGQKKDV+VYRLMTCGTVEEKIYRKQ++KGGLFK
Sbjct: 703 RADRVIVVDPSWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQVYKGGLFK 762
Query: 807 TATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDT 866
ATEHKEQIRYFSQQDLR L SLPK+GFDVS+TQ+QL+EEH QH +D+S +AHI+FL +
Sbjct: 763 IATEHKEQIRYFSQQDLRGLFSLPKEGFDVSVTQRQLNEEHDRQHTVDDSFKAHIKFLKS 822
Query: 867 LGIAGVSHHSLLFSKTARVQVVQEEEEATRRKGTAFVGN--SSSSYLVARNVDGAEYAFN 924
GIAGVSHHSLLFSK V+ E++E TR +VG SSS+ VA G E+AFN
Sbjct: 823 QGIAGVSHHSLLFSKAEPVRADHEDDEVTRNHRVKYVGTSRSSSNEHVAY---GPEFAFN 879
Query: 925 PRDIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISNKVTVERLPDKGTKLQKQIAELN 983
P+D+ L+KK SSP + KL ES+IK++IK +SQ +SN V ++P KG KL+K++AELN
Sbjct: 880 PKDVGLSKKGSSPSSAGKLTESEIKDKIKSISQTLSNMVCFSQIPGKGEKLKKRLAELN 938
>gi|449451303|ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis sativus]
Length = 1016
Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/999 (59%), Positives = 719/999 (71%), Gaps = 69/999 (6%)
Query: 12 DGPKFSDITVFDSPPKAKTVSENDNYKGGNEIRDILNDLSARLEILSIDKRR-VPKTVDP 70
+ P FS IT FDSP + + G+EIRDILNDLSARLE+LS++KRR PK VD
Sbjct: 73 NAPNFSGITDFDSPSPPPPLPVENRVNKGSEIRDILNDLSARLELLSVEKRREKPKKVDS 132
Query: 71 EDDFSRLVKNGDTGQGSKGNLPEYASAESSFSLTSDLSDSSSGVTKD----NVGGVVESV 126
+DFS + +K + E S + S ++ L S V K NVGG
Sbjct: 133 IEDFSASSGGKGNEEANKADDREVESLKFSTKPSNSLLGESVKVEKAVKTLNVGG----- 187
Query: 127 ADEYEESKGDDVADEEQETENVGIGLKRNEPRWVDNNLVSARESFESNLDGEEDGGSLSE 186
+ EY G+++ + + + G+ + + D+
Sbjct: 188 SGEY----GEEILPNKVKVDVFDEGIHKVDTCGKDS------------------------ 219
Query: 187 VEGDEHLSRVHETKKHHQRQKKNEPKRVHDGERFNGQSFVSGGREEYDDEDDCVIVSGKL 246
E L + KH + + K + V G+S V E +DEDDCV+++ +
Sbjct: 220 ----EQLLNLEHGNKHDKGRDKCRSQDVQKTYNSLGKSPVLIDEGEVEDEDDCVVLNHET 275
Query: 247 V-VNRPDRRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLF 305
N R+DGK + + LD +D +LE + S +G ST+ L G+I ML+
Sbjct: 276 RDFNEVRRQDGKYEEKDDGS--DGLDKSCEDFILEGKSS---AGRNSTFKLQGRIATMLY 330
Query: 306 PHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLS 365
PHQR+GL+WLWSLHC GKGGILGDDMGLGKTMQICGFLAGLF+SRLIKR LVVAPKTLL
Sbjct: 331 PHQRDGLQWLWSLHCLGKGGILGDDMGLGKTMQICGFLAGLFYSRLIKRVLVVAPKTLLP 390
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
HWIKEL+ VGLS K REY+GT K RQYEL Y+LQDKGVLLTTYDIVRNNSKSL+G+ F
Sbjct: 391 HWIKELSVVGLSEKTREYYGTSAKLRQYELNYILQDKGVLLTTYDIVRNNSKSLQGNCFS 450
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALF 485
DE +D WDYMILDEGHLIKNPSTQRAKSLL+IPSAHRIIISGTP+QNNLKELWALF
Sbjct: 451 EDEETEDGTTWDYMILDEGHLIKNPSTQRAKSLLDIPSAHRIIISGTPLQNNLKELWALF 510
Query: 486 NFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNE 545
NFCCP+LLGD WFKE YE ILRGNDK A +R+KRIGS VAK LRERIQPYFLRR+K+E
Sbjct: 511 NFCCPDLLGDKHWFKEHYESAILRGNDKKASERDKRIGSVVAKGLRERIQPYFLRRMKSE 570
Query: 546 VFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTILKKI 605
VF+ED+ ++ LSKKN++IVWLRLTSCQRQLYEAFL S++ LSAFDGS LAALTILKKI
Sbjct: 571 VFNEDNDQAATKLSKKNDIIVWLRLTSCQRQLYEAFLKSDLALSAFDGSVLAALTILKKI 630
Query: 606 CDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISF 665
CDHPLLLTKRAAE+VL+GM+++L+PEDA +AEKLA +ADV ++D ++ DN+SCKISF
Sbjct: 631 CDHPLLLTKRAAEEVLEGMETVLSPEDAGVAEKLAKRLADVVDRDFYEVYDDNVSCKISF 690
Query: 666 ILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQE 725
I+SLLD L+P+GH++LIFSQTRKML+L+++S+ S Y+FLRIDGTTKA DRVKIVNDFQE
Sbjct: 691 IMSLLDNLVPKGHSILIFSQTRKMLSLLEKSLLSNDYEFLRIDGTTKAMDRVKIVNDFQE 750
Query: 726 GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLM 785
G A IFLLTSQVGGLGLTLT+ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDV+VYRLM
Sbjct: 751 GRGASIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVIVYRLM 810
Query: 786 TCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHE 845
TCGTVEEKIYRKQ++KGGLFKTATEHKEQIRYFSQQDLREL SLP++GFD S+TQQQ+HE
Sbjct: 811 TCGTVEEKIYRKQVYKGGLFKTATEHKEQIRYFSQQDLRELFSLPEEGFDTSVTQQQMHE 870
Query: 846 EHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVVQEEEEATRRKGTAFVGN 905
EH Q MDESL +HI+FL+T GIAGVSHH+LLFSKTA V EEE T +
Sbjct: 871 EHDQQLAMDESLRSHIKFLETQGIAGVSHHNLLFSKTAPEPVYALEEEDTSFR------- 923
Query: 906 SSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISNKVTV 965
A YAFNP+D+KLN+ +++ + K +++K RI RLSQ + NKV +
Sbjct: 924 -------------ARYAFNPKDVKLNRSTTNSSSPGKPTVNELKYRINRLSQTLENKVLI 970
Query: 966 ERLPDKGTKLQKQIAELNSELNKIKMEKRPEPGVIDLDD 1004
RLPD+G ++ KQI ELN +L++++ K E VI++ D
Sbjct: 971 SRLPDRGERIHKQIDELNLQLSELR-RKEHESEVIEIAD 1008
>gi|8777308|dbj|BAA96898.1| unnamed protein product [Arabidopsis thaliana]
Length = 1053
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/781 (66%), Positives = 605/781 (77%), Gaps = 51/781 (6%)
Query: 239 CVIVSGKLVVNRPDRRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPG 298
C+I+SGK + K+NK A S N D+ LEDEGSITL+G +Y LPG
Sbjct: 320 CLILSGKKAA------EMKINKPARS--YNAKRHGYDERSLEDEGSITLTGLNLSYTLPG 371
Query: 299 KIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVV 358
KI ML+PHQREGL WLWSLH QGKGGILGDDMGLGKTMQIC FLAGLFHS+LIKRALVV
Sbjct: 372 KIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRALVV 431
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
APKTLL HW+KEL VGLS REY+GT K R+Y+L ++LQ KG+LLTTYDIVRNN+K+
Sbjct: 432 APKTLLPHWMKELATVGLSQMTREYYGTSTKAREYDLHHILQGKGILLTTYDIVRNNTKA 491
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNL 478
L+G +DE +D WDYMILDEGHLIKNP+TQRAKSLLEIPS+HRIIISGTPIQNNL
Sbjct: 492 LQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNL 551
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
K L FN FK+ YE ILRG DK+A DRE+RIGS VAK LRE IQP+F
Sbjct: 552 KALS--FN-----------RFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFF 598
Query: 539 LRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAA 598
LRRLK+EVF +D TS LSKK+E++VWLRLT+CQRQLYEAFLNSEIVLSAFDGSPLAA
Sbjct: 599 LRRLKSEVFGDDGATSK--LSKKDEIVVWLRLTACQRQLYEAFLNSEIVLSAFDGSPLAA 656
Query: 599 LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDN 658
LTILKKICDHPLLLTKRAAEDVL+GMDS L E+A +AE+LAMHIAD + DDFQ ++D+
Sbjct: 657 LTILKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAERLAMHIADNVDTDDFQTKNDS 716
Query: 659 ISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVK 718
ISCK+SFI+SLLD S+ S GY FLRIDGTTKA DR+K
Sbjct: 717 ISCKLSFIMSLLD------------------------SLTSNGYSFLRIDGTTKAPDRLK 752
Query: 719 IVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKD 778
V +FQEG VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ KD
Sbjct: 753 TVEEFQEGHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKD 812
Query: 779 VVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSL 838
V+VYRLMT TVEEKIYRKQ++KGGLFKTATEHKEQIRYFSQQDLREL SLPK GFDVS
Sbjct: 813 VIVYRLMTSATVEEKIYRKQVYKGGLFKTATEHKEQIRYFSQQDLRELFSLPKGGFDVSP 872
Query: 839 TQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVVQ-EEEEATRR 897
TQQQL+EEH +Q +DE LE+H++FL+TLGIAGVSHHSLLFSKTA +Q +Q +EEE RR
Sbjct: 873 TQQQLYEEHYNQIKLDEKLESHVKFLETLGIAGVSHHSLLFSKTAPIQAIQKDEEEQIRR 932
Query: 898 KGTAFVGNSSSSYLVARNVDGAEYAFNPRDIKLNKK-SSSPKNEAKLKESDIKERIKRLS 956
+ +G +S+S ++GA+YAF P+D+ L+K+ + SP ++ +L ES IK R+ RL+
Sbjct: 933 ETALLLGRASASISQDTVINGADYAFKPKDVNLDKRINISPVDDKELSESVIKARLNRLT 992
Query: 957 QLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPE-PGVIDL-DDVTGKLQRGLF 1014
L+ NK TV RLPD G K+QKQIAEL EL +K +R P VIDL +D++ K+Q+GL
Sbjct: 993 MLLQNKGTVSRLPDGGAKIQKQIAELTRELKDMKAAERINMPQVIDLEEDISRKMQKGLN 1052
Query: 1015 L 1015
L
Sbjct: 1053 L 1053
>gi|222629845|gb|EEE61977.1| hypothetical protein OsJ_16754 [Oryza sativa Japonica Group]
Length = 1678
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/713 (64%), Positives = 562/713 (78%), Gaps = 15/713 (2%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
R Y LPG+I NML+PHQREGLRWLW LHC+G GGILGDDMGLGKTMQ+ FLAGLFHSR
Sbjct: 267 RKPYNLPGRIFNMLYPHQREGLRWLWVLHCRGTGGILGDDMGLGKTMQVSAFLAGLFHSR 326
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
LIKR LVVAPKTLL+HW KEL+ V L KIR+Y G R YEL+Y ++ G+LLTTYD
Sbjct: 327 LIKRVLVVAPKTLLTHWTKELSVVSLKDKIRDYSGPNANARNYELKYAFKEGGILLTTYD 386
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
IVRNN K ++G+ F +D +++ +W+Y+ILDEGH+IKNP TQRA+SL EIP AHRI+IS
Sbjct: 387 IVRNNFKMIKGN-FTNDFDDEEETLWNYVILDEGHIIKNPKTQRAQSLFEIPCAHRIVIS 445
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTPIQNNLKE+WALF FCCPE+LGD + FK +YE I++GNDK+A +R+K IGS VAKEL
Sbjct: 446 GTPIQNNLKEMWALFYFCCPEVLGDKEQFKARYEHAIIQGNDKNATNRQKHIGSNVAKEL 505
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RERI+PYFLRR+KNEVF + L+KKNE+I+WL+LTSCQRQLYEAFLNSE+V S+
Sbjct: 506 RERIKPYFLRRMKNEVFLDSGTGEDKKLAKKNELIIWLKLTSCQRQLYEAFLNSELVHSS 565
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
GSPLAA+TILKKICDHPLLLTK+AAE VL+GMD+MLN ++ + EK+AM++AD+A D
Sbjct: 566 MQGSPLAAITILKKICDHPLLLTKKAAEGVLEGMDAMLNNQEMGMVEKMAMNLADMAHDD 625
Query: 651 DFQEQH--DNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRID 708
D E ++SCK+SF++SLL L+ EGHNVLIFSQTRKMLN+IQE+I +GYKFLRID
Sbjct: 626 DDVELQVGQDVSCKLSFMMSLLQNLVSEGHNVLIFSQTRKMLNIIQEAIILEGYKFLRID 685
Query: 709 GTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
GTTK S+R +IV DFQEG APIFLLT+QVGGLGLTLTKA RVIVVDPAWNPSTDNQSVD
Sbjct: 686 GTTKISERERIVKDFQEGPGAPIFLLTTQVGGLGLTLTKAARVIVVDPAWNPSTDNQSVD 745
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLS 828
RAYRIGQ KDV+VYRLMT GT+EEKIY+ Q+FKG LF+TATEHKEQ RYFS++D++EL S
Sbjct: 746 RAYRIGQMKDVIVYRLMTSGTIEEKIYKLQVFKGALFRTATEHKEQTRYFSKRDIQELFS 805
Query: 829 LPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVV 888
LP+QGFDVSLTQ+QL EEHG Q MD+SL HIQFL+ GIAGVSHHSLLFSKTA + +
Sbjct: 806 LPEQGFDVSLTQKQLQEEHGQQLVMDDSLRKHIQFLEQQGIAGVSHHSLLFSKTAILPTL 865
Query: 889 QEEEEATRRKGTA----FVGNSSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKLK 944
+ + R+ + +SS Y+ +GA YA P++ ++ SP + +
Sbjct: 866 NDNDGLDSRRAMPMAKHYYKGASSDYV----ANGAAYAMKPKE--FIARTYSPNSTSTES 919
Query: 945 ESDIKERIKRLSQLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPEP 997
+IK +I RLSQ ++N V V +LPD+G K+++QI EL+ +L I E PEP
Sbjct: 920 PEEIKAKINRLSQTLANTVLVAKLPDRGDKIRRQINELDEKLTVI--ESSPEP 970
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/316 (62%), Positives = 237/316 (75%), Gaps = 10/316 (3%)
Query: 574 QRQLYEAFLNSEIVLS---AFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP 630
+R+LYEAFLN + V S A GS L A TIL+KICDHPLLLTKR +D L+ M +MLN
Sbjct: 1213 KRRLYEAFLNKDPVRSQTGALKGSSLEASTILRKICDHPLLLTKRDTDDFLEEMGAMLNN 1272
Query: 631 EDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKML 690
D + E++ + D D + SCKI+FIL LL L+ EGH VLIFSQTR ML
Sbjct: 1273 RDMCMVERI---LEDNLYADKRLQIVQGASCKIAFILPLLRNLVEEGHYVLIFSQTRVML 1329
Query: 691 NLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADR 750
NLIQ+++ +G+KFLRIDGTTK S+R KI+ DFQEG +PI LLTS VGGLG TLTKADR
Sbjct: 1330 NLIQDAVSIEGHKFLRIDGTTKISERKKILKDFQEGLDSPILLLTSHVGGLGNTLTKADR 1389
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE 810
VIVVDPAWNPS DNQSVDRAYRIGQ KDV+VYRL+TCGT+EEKIY++QIFKGGLF+TATE
Sbjct: 1390 VIVVDPAWNPSIDNQSVDRAYRIGQTKDVIVYRLVTCGTIEEKIYKQQIFKGGLFRTATE 1449
Query: 811 HKEQIRYFSQ----QDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDT 866
KEQ ++++Q Q+ +E SLP GFD SLTQ ++ E+G Q MDESL+ HIQFL+
Sbjct: 1450 CKEQPQFYNQDLYLQNEQEYSSLPPHGFDASLTQHKMQVENGQQLVMDESLKKHIQFLEQ 1509
Query: 867 LGIAGVSHHSLLFSKT 882
GIAGV+ H +LF KT
Sbjct: 1510 QGIAGVNRHGVLFCKT 1525
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 395 LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDD-AIWDYMILDEGHLIKNPSTQ 453
L +Q+ G+LLT+Y IVRNN LRG+ ++ +++ +WDY+ILDEGH++KN TQ
Sbjct: 1128 LGKTIQEGGILLTSYHIVRNNYMLLRGNGNGNNVDNNEEEPLWDYVILDEGHIVKNTKTQ 1187
Query: 454 RAKSLLEIPSAHRIIISGTPIQNNLK 479
RA+SL +IPSAHRI+++GTPIQN LK
Sbjct: 1188 RAQSLFQIPSAHRIVLTGTPIQNKLK 1213
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH 348
+P ++ L+PHQR+GL WLW+LHC GGIL DDMGLGKT+Q G L +H
Sbjct: 1091 IPRRVLGSLYPHQRDGLAWLWALHCTATGGILADDMGLGKTIQEGGILLTSYH 1143
>gi|218195896|gb|EEC78323.1| hypothetical protein OsI_18057 [Oryza sativa Indica Group]
Length = 987
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/730 (63%), Positives = 570/730 (78%), Gaps = 23/730 (3%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
R Y LPG+I NML+PHQREGLRWLW LHC+G GGILGDDMGLGKTMQ+ FLAGLFHSR
Sbjct: 266 RKPYNLPGRIFNMLYPHQREGLRWLWVLHCRGTGGILGDDMGLGKTMQVSAFLAGLFHSR 325
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
LIKR LVVAPKTLL+HW KEL+ VGL KIR+Y G R YEL+Y ++ G+LLTTYD
Sbjct: 326 LIKRVLVVAPKTLLTHWTKELSVVGLKDKIRDYSGPNANARNYELKYAFKEGGILLTTYD 385
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
IVRNN K ++G+ F +D +++ +W+Y+ILDEGH+IKNP TQRA+SL EIP HRI+IS
Sbjct: 386 IVRNNFKMIKGN-FTNDFDDEEETLWNYVILDEGHIIKNPKTQRAQSLFEIPCVHRIVIS 444
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTPIQNNLKE+WALF FCCPE+LGD + FK +YE I++GNDK+A +R+K IGS VAKEL
Sbjct: 445 GTPIQNNLKEMWALFYFCCPEVLGDKEQFKARYEHAIIQGNDKNATNRQKHIGSNVAKEL 504
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RERI+PYFLRR+KNEVF + L+KKNE+I+WL+LTSCQRQLYEAFLNSE+V S+
Sbjct: 505 RERIKPYFLRRMKNEVFLDSGTGEDKKLAKKNELIIWLKLTSCQRQLYEAFLNSELVHSS 564
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
GSPLAA+TILKKICDHPLLLTK+AAE VL+GMD MLN ++ + EK+AM++AD+A D
Sbjct: 565 MQGSPLAAITILKKICDHPLLLTKKAAEGVLEGMDVMLNNQEMGMVEKMAMNLADMAHDD 624
Query: 651 DFQEQH--DNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRID 708
D E ++SCK+SF++SLL L+ EGHNVLIFSQTRKMLN+IQE+I +GYKFLRID
Sbjct: 625 DDVELQVGQDVSCKLSFMMSLLQNLVSEGHNVLIFSQTRKMLNIIQEAIILEGYKFLRID 684
Query: 709 GTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
GTTK S+R +IV DFQEG APIFLLT+QVGGLGLTLTKA RVIVVDPAWNPSTDNQSVD
Sbjct: 685 GTTKISERERIVKDFQEGPGAPIFLLTTQVGGLGLTLTKAARVIVVDPAWNPSTDNQSVD 744
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLS 828
RAYRIGQ KDV+VYRLMT GT+EEKIY+ Q+FKG LF+TATEHKEQ RYFS++D++EL S
Sbjct: 745 RAYRIGQMKDVIVYRLMTSGTIEEKIYKLQVFKGALFRTATEHKEQTRYFSKRDIQELFS 804
Query: 829 LPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVV 888
LP+QGFDVSLTQ+QL EEHG Q MD+SL HIQFL+ GIAGVSHHSLLFSKTA + +
Sbjct: 805 LPEQGFDVSLTQKQLQEEHGQQLVMDDSLRKHIQFLEQQGIAGVSHHSLLFSKTAILPTL 864
Query: 889 QEEE--EATRRK---GTAFVGNSSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKL 943
+ + +++RR + +SS Y +GA YA P++ ++ SP + +
Sbjct: 865 NDNDGLDSSRRAMPMAKHYYKGASSDYA----ANGAAYAMKPKE--FIARTYSPNSTSTE 918
Query: 944 KESDIKERIKRLSQLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPEP------ 997
+IK +I RLSQ ++N V V +LPD+G K+++QI EL+ +L I E PEP
Sbjct: 919 SPEEIKAKINRLSQTLANTVLVAKLPDRGDKIRRQINELDEKLTVI--ESSPEPLERKGP 976
Query: 998 -GVIDLDDVT 1006
VI LDD++
Sbjct: 977 AEVICLDDLS 986
>gi|357162876|ref|XP_003579552.1| PREDICTED: DNA excision repair protein ERCC-6-like [Brachypodium
distachyon]
Length = 999
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/745 (62%), Positives = 567/745 (76%), Gaps = 25/745 (3%)
Query: 274 SDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGL 333
++D +E GS ++ P Y LPG+I ML+PHQREGLRWLW LHC+G GGILGDDMGL
Sbjct: 262 TEDFKMEPTGSGVMAKP---YKLPGRIFKMLYPHQREGLRWLWVLHCRGTGGILGDDMGL 318
Query: 334 GKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQY 393
GKTMQ+ FLAGLFHSRLI+R LVVAPKTLL+HW+KEL+ VGL KIR+Y G V R
Sbjct: 319 GKTMQVSAFLAGLFHSRLIRRVLVVAPKTLLTHWMKELSVVGLKEKIRDYSGPSVNIRNS 378
Query: 394 ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQ 453
ELQY + G+LLTTYDIVRNN K +RG + + ++ +WDY+ILDEGH+IKNP TQ
Sbjct: 379 ELQYAFRVGGILLTTYDIVRNNYKLMRGDFYNDADDEEEGRLWDYVILDEGHIIKNPKTQ 438
Query: 454 RAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDK 513
RA+SLL+IP HRI+ISGTPIQNNLKE+WALF FCCPE+LGD FK +YELPILRGNDK
Sbjct: 439 RAQSLLQIPCVHRIVISGTPIQNNLKEMWALFFFCCPEILGDKDEFKTRYELPILRGNDK 498
Query: 514 HALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSC 573
A +REK IGS VAKELRERI+PYFLRR+K+EVF + T LSKKNE+I+WL+LT+C
Sbjct: 499 SATNREKHIGSNVAKELRERIKPYFLRRMKSEVFLDTGSTDDKKLSKKNELIIWLKLTAC 558
Query: 574 QRQLYEAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSM--LNPE 631
QRQLYEAFLNSE+V S+ GSPLAA+TILKKICDHPL+LTKRAAE +L+GM+ M LN +
Sbjct: 559 QRQLYEAFLNSELVHSSMQGSPLAAITILKKICDHPLILTKRAAEGILEGMEGMDGLNNQ 618
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
+ + EK+A ++AD+A DD + +SCK+SFI+SLL KL+ EGH+VLIFSQTRKMLN
Sbjct: 619 EIGMVEKMAKNLADMAHDDDALQVDQEVSCKLSFIMSLLRKLLEEGHHVLIFSQTRKMLN 678
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
LIQE+I +GYKFLRIDGTTK S+R +IV DFQEG A IFLLT+QVGGLGLTLTKA RV
Sbjct: 679 LIQEAILLEGYKFLRIDGTTKISERERIVKDFQEGPGAQIFLLTTQVGGLGLTLTKAARV 738
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH 811
IVVDPAWNPSTDNQSVDRAYRIGQ KDV+VYRLMT GT+EEKIY+ Q+FKG LF+TATE
Sbjct: 739 IVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSGTIEEKIYKLQVFKGALFRTATEQ 798
Query: 812 KEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAG 871
KEQ RYFS++D++EL SLP+QGFDVSLTQ+QL EEH Q MDESL HI FL+ GIAG
Sbjct: 799 KEQTRYFSKRDIQELFSLPEQGFDVSLTQKQLQEEHEQQLVMDESLREHILFLEQQGIAG 858
Query: 872 VSHHSLLFSKTARVQVVQEEEEATRRKGT-AFVGN----SSSSYLVARNVDGAEYAFNPR 926
VSHHSLLF+K A + + E E + T +G SSS Y+ +GA +AF P+
Sbjct: 859 VSHHSLLFTKAAILPTLSENEALDNKPPTMPMMGRQYKASSSDYV----ANGAAHAFKPK 914
Query: 927 DIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISNKVTVERLPDKGTKLQKQIAELNSEL 986
+ ++ SP N + +IK +I RLSQ ++N V RLPD+G KL+KQI +L+ +L
Sbjct: 915 E--FTPRTYSPINTSSESPEEIKAKINRLSQTLANTTLVSRLPDRGDKLKKQIHDLDEKL 972
Query: 987 NKIKMEKRPEPG-------VIDLDD 1004
I E PE VI LDD
Sbjct: 973 TVI--ESSPESAASKGATEVICLDD 995
>gi|414586257|tpg|DAA36828.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea mays]
Length = 1048
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/742 (61%), Positives = 558/742 (75%), Gaps = 18/742 (2%)
Query: 274 SDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGL 333
++D ++ G+ S P Y LPGKI MLF HQREGLRWLW LHC+G GGILGDDMGL
Sbjct: 314 TEDFKMDPTGTAATSKP---YKLPGKIFKMLFAHQREGLRWLWVLHCRGTGGILGDDMGL 370
Query: 334 GKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQY 393
GKTMQ+ FLAGLFHSRL+KR L+VAPKTLL+HW KEL+ VGL KIR+Y G R Y
Sbjct: 371 GKTMQVAAFLAGLFHSRLVKRVLIVAPKTLLAHWTKELSIVGLKEKIRDYSGPSTNIRNY 430
Query: 394 ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDD--AIWDYMILDEGHLIKNPS 451
ELQY ++ G+L+TTYDIVRNN K +RG+S+ + DD+ +W+Y+ILDEGHLIKN
Sbjct: 431 ELQYAFKEGGILITTYDIVRNNYKLIRGNSYNNSNDDDDEEGTLWNYVILDEGHLIKNNK 490
Query: 452 TQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGN 511
TQRA+SL EIP AHRI+ISGTPIQNNLKE+W LFNFCCP++LGD + FK +YE ILRGN
Sbjct: 491 TQRAQSLYEIPCAHRIVISGTPIQNNLKEMWTLFNFCCPDVLGDKQQFKIRYETAILRGN 550
Query: 512 DKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLT 571
DK+A REK +GS VAKELRERI+PYFLRRLK+EV + + TL+KKNE+IVWL+LT
Sbjct: 551 DKNATAREKHVGSNVAKELRERIKPYFLRRLKSEVVFDTGASEEKTLAKKNELIVWLKLT 610
Query: 572 SCQRQLYEAFLNSEIVLSAFD--GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLN 629
CQR+LYEAFLNSE+V A SPLAA+TILKKICDHPLLLTK+ AE VL+GM MLN
Sbjct: 611 PCQRKLYEAFLNSELVHLALQPKASPLAAITILKKICDHPLLLTKKGAEGVLEGMGEMLN 670
Query: 630 PEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKM 689
+D + EK+AM++AD+A D+ E ++SCK+SFI+SLL L+ EGH+VLIFSQTRKM
Sbjct: 671 DQDIGMVEKMAMNLADMAHDDNALEVGQDVSCKLSFIMSLLRNLVGEGHHVLIFSQTRKM 730
Query: 690 LNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKAD 749
LNLIQE+I +GY FLRIDGTTK SDR +IV DFQEG AP+FLLT+QVGGLGLTLTKA
Sbjct: 731 LNLIQEAIILEGYAFLRIDGTTKVSDRERIVKDFQEGCGAPVFLLTTQVGGLGLTLTKAT 790
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
RVIVVDPAWNPSTDNQSVDRAYRIGQ K+V+VYRLMT T+EEKIY+ Q+ KG LF+TAT
Sbjct: 791 RVIVVDPAWNPSTDNQSVDRAYRIGQTKNVIVYRLMTSATIEEKIYKLQVLKGALFRTAT 850
Query: 810 EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGI 869
E KEQ RYFS+ +++EL SLP+QGFDVSLT +QL EEHG Q +DESL HIQFL+ GI
Sbjct: 851 EQKEQTRYFSKSEIQELFSLPQQGFDVSLTHKQLQEEHGQQVVLDESLRKHIQFLEQQGI 910
Query: 870 AGVSHHSLLFSKTARVQVVQEEEEA-TRRKGTA-----FVGNSSSSYLVARNVDGAEYAF 923
AGVSHHSLLFSKTA + + E + ++ +G + SSS Y+ +GA +A
Sbjct: 911 AGVSHHSLLFSKTATLPTLSENDALDSKPRGMPMMPQQYYKGSSSDYV----ANGASFAL 966
Query: 924 NPRDIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISNKVTVERLPDKGTKLQKQIAELN 983
P+D ++ P N + +IK RI RLSQ +SN V + +LPD G K+++QI EL+
Sbjct: 967 KPKDESFTVRNYIPSNRSAESPEEIKARINRLSQTLSNAVLLSKLPDGGEKIRRQINELD 1026
Query: 984 SELNKI-KMEKRPEPGVIDLDD 1004
+L K K VI LDD
Sbjct: 1027 EKLTSAEKGLKEGGTEVISLDD 1048
>gi|326520307|dbj|BAK07412.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1148
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/756 (60%), Positives = 560/756 (74%), Gaps = 30/756 (3%)
Query: 257 KLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLW 316
K N++A +V + ++D +E G + P Y LPG I ML+PHQREGL+WLW
Sbjct: 372 KENRAADDAEDDVGWEKTEDFKMEPTGCGKMVKP---YKLPGSIFEMLYPHQREGLKWLW 428
Query: 317 SLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGL 376
LHC+G GGILGDDMGLGKTMQ+ FLAGLFH RLIKR LVVAPKTLL+HW KEL+ VGL
Sbjct: 429 VLHCRGTGGILGDDMGLGKTMQVSSFLAGLFHCRLIKRVLVVAPKTLLAHWTKELSVVGL 488
Query: 377 SAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAG------ 430
KIR+Y G V R ELQY ++ G+LLTTYDIVRNN K +RG + + G
Sbjct: 489 KHKIRDYSGPSVNVRNSELQYAFKEGGILLTTYDIVRNNYKLIRGDFYNGNVEGKYDKLI 548
Query: 431 -----------DDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
+D W+Y+ILDEGH+IKNPSTQRA+SLLEIP HRI+ISGTPIQNNLK
Sbjct: 549 RGDSYNDADEDEDGKFWNYVILDEGHIIKNPSTQRARSLLEIPCVHRIVISGTPIQNNLK 608
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
E+WALF FCCPE+LGD FK +YE I+RGNDK+A +REK GS VAK LRERI+PYFL
Sbjct: 609 EMWALFYFCCPEVLGDKDEFKSRYESAIIRGNDKNATNREKHTGSTVAKALRERIKPYFL 668
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAAL 599
RR+K+EVF + LSKKNE+IVWLRLT+CQRQLYEAFLNS++V S+ GSPLAA+
Sbjct: 669 RRMKSEVFVDTGSADDKKLSKKNELIVWLRLTACQRQLYEAFLNSDLVHSSMQGSPLAAI 728
Query: 600 TILKKICDHPLLLTKRAAEDVLDGMDSM---LNPEDAALAEKLAMHIADVAEKDDFQEQH 656
T+LKKICDHPL+LTKRAAED+L+GM+ M L+ +D + EK+AM++AD+A + +
Sbjct: 729 TVLKKICDHPLILTKRAAEDILEGMEGMDVKLDNKDMGMVEKMAMNLADMAHDGEALQVD 788
Query: 657 DNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDR 716
+ +SCKI FI+SLL KL+ EGH+VL+FSQTRKMLNLIQE+I +GYKFLRIDGTTK ++R
Sbjct: 789 EEVSCKIIFIMSLLRKLLEEGHHVLVFSQTRKMLNLIQEAILLEGYKFLRIDGTTKIAER 848
Query: 717 VKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQK 776
+IV DFQEG A IFLLT+QVGGLGLTLTKA RVIVVDPAWNPSTD+QSVDRAYRIGQ
Sbjct: 849 ERIVKDFQEGPGAQIFLLTTQVGGLGLTLTKAARVIVVDPAWNPSTDSQSVDRAYRIGQT 908
Query: 777 KDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDV 836
KDV+VYRLMT GT+EEKIY+ Q+ KG LF+TATE KEQ RYFS++D++EL SLP QGFDV
Sbjct: 909 KDVIVYRLMTSGTIEEKIYKMQVLKGALFRTATEQKEQTRYFSKRDIQELFSLPAQGFDV 968
Query: 837 SLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVVQEEEEATR 896
SLTQ+QL EEHG Q +MDESL HI+FL+ GIAGVSHHSLLFSKTA + ++ + ++
Sbjct: 969 SLTQKQLQEEHGHQLDMDESLREHIEFLERQGIAGVSHHSLLFSKTAVLPSLEPDAMESK 1028
Query: 897 RKGTAFVG---NSSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKLKESDIKERIK 953
+ N +SS N GA +AF P+D ++ S N + +IK +I
Sbjct: 1029 NPTMPMMARQYNKASSMDYVAN--GAAHAFKPKD--FTPRAYSASNTSSESPEEIKAKIN 1084
Query: 954 RLSQLISNKVTVERLPDKGTKLQKQIAELNSELNKI 989
RLSQ +SN V RLPD+G KL+KQI +L+ +L I
Sbjct: 1085 RLSQTLSNTTLVSRLPDRGEKLKKQIHDLDEKLMVI 1120
>gi|242077806|ref|XP_002448839.1| hypothetical protein SORBIDRAFT_06g034160 [Sorghum bicolor]
gi|241940022|gb|EES13167.1| hypothetical protein SORBIDRAFT_06g034160 [Sorghum bicolor]
Length = 1042
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/744 (59%), Positives = 548/744 (73%), Gaps = 31/744 (4%)
Query: 274 SDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGL 333
++D ++ G+ S P Y LPGKI MLF HQREGLRWLW LHC+G GGILGDDMGL
Sbjct: 307 TEDFKMDPTGTAATSKP---YKLPGKIFKMLFSHQREGLRWLWVLHCRGTGGILGDDMGL 363
Query: 334 GKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQY 393
GKTMQ+ FLAGLFHSRL+KR L+VAPKTLL+HW KEL+ VGL KIR+Y G R Y
Sbjct: 364 GKTMQVAAFLAGLFHSRLVKRVLIVAPKTLLAHWTKELSIVGLKEKIRDYSGPSTNIRSY 423
Query: 394 ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQ 453
ELQY ++ G+LLTTYDIVRNN K +RG+S+ +D+ ++ +W+Y+ILDEGHLIKN TQ
Sbjct: 424 ELQYAFKEGGILLTTYDIVRNNYKLIRGNSYNNDDE-EEGTLWNYIILDEGHLIKNNKTQ 482
Query: 454 RAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDK 513
RA+SL EIP AHRI+ISGTPIQNNLKE+W LFNFCCP++LGD + FK ++E PILRGNDK
Sbjct: 483 RAQSLYEIPCAHRIVISGTPIQNNLKEMWTLFNFCCPDVLGDKQQFKIRFETPILRGNDK 542
Query: 514 HALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSC 573
+A REK +GS VAKELRERI+PYFLRR+K+EV + + TL+KKNE+IVWL+LT C
Sbjct: 543 NATAREKHVGSNVAKELRERIKPYFLRRMKSEVVFDTGASEEKTLAKKNELIVWLKLTPC 602
Query: 574 QRQLYEAFLNSEIVLSAFD--GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
QR+LY AFLNSE+V A SPLAA+TILKKICDHPLLLTK+ AE VL+GMD MLN +
Sbjct: 603 QRKLYTAFLNSELVHLALQPKASPLAAITILKKICDHPLLLTKKGAEGVLEGMDEMLNDQ 662
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
D + EK+AM++AD+A DD + ++SCK+SFI+SLL L+ EGH+VLIFSQTRKMLN
Sbjct: 663 DIGMVEKMAMNLADMAHDDDALQVGQDVSCKLSFIMSLLRNLVGEGHHVLIFSQTRKMLN 722
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
LIQE+I +GY+FLRIDGTTK S+R +IV DFQEG APIFLLT+QVGGLGLTLTKA RV
Sbjct: 723 LIQEAIILEGYEFLRIDGTTKVSERERIVKDFQEGRGAPIFLLTTQVGGLGLTLTKAARV 782
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH 811
IVVDPAWNPSTDNQSVDRAYRIGQ K+V+VYRLMT T+EEKIY+ Q+
Sbjct: 783 IVVDPAWNPSTDNQSVDRAYRIGQTKNVIVYRLMTSATIEEKIYKLQV-----------Q 831
Query: 812 KEQIRYFSQQ---DLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLG 868
+ ++ Q D+++L SLP+QGFDVSLTQ+QL EEHG Q MDESL HIQFL+ G
Sbjct: 832 ISLLTFWLMQLLADIQDLFSLPQQGFDVSLTQKQLQEEHGQQLVMDESLRKHIQFLEQQG 891
Query: 869 IAGVSHHSLLFSKTARVQVVQEEE------EATRRKGTAFVGNSSSSYLVARNVDGAEYA 922
IAGVSHHSLLFSKTA + + E + A + SSS Y+ + GA +A
Sbjct: 892 IAGVSHHSLLFSKTATLPTLSENDALDSKPRAMPMMPQHYYKRSSSDYVAS----GAAFA 947
Query: 923 FNPRDIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISNKVTVERLPDKGTKLQKQIAEL 982
P+D + SP N + +IK RI RLSQ +SN V +LPD G K+++QI+EL
Sbjct: 948 LKPKDESFTVRKYSPSNRSAESPEEIKARINRLSQTLSNAALVSKLPDGGEKIRRQISEL 1007
Query: 983 NSELNKI-KMEKRPEPGVIDLDDV 1005
+ +L K +K VI LDD+
Sbjct: 1008 DEKLASAEKGQKEEATEVISLDDL 1031
>gi|414586258|tpg|DAA36829.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea mays]
Length = 961
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/623 (67%), Positives = 498/623 (79%), Gaps = 7/623 (1%)
Query: 274 SDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGL 333
++D ++ G+ S P Y LPGKI MLF HQREGLRWLW LHC+G GGILGDDMGL
Sbjct: 314 TEDFKMDPTGTAATSKP---YKLPGKIFKMLFAHQREGLRWLWVLHCRGTGGILGDDMGL 370
Query: 334 GKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQY 393
GKTMQ+ FLAGLFHSRL+KR L+VAPKTLL+HW KEL+ VGL KIR+Y G R Y
Sbjct: 371 GKTMQVAAFLAGLFHSRLVKRVLIVAPKTLLAHWTKELSIVGLKEKIRDYSGPSTNIRNY 430
Query: 394 ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDD--AIWDYMILDEGHLIKNPS 451
ELQY ++ G+L+TTYDIVRNN K +RG+S+ + DD+ +W+Y+ILDEGHLIKN
Sbjct: 431 ELQYAFKEGGILITTYDIVRNNYKLIRGNSYNNSNDDDDEEGTLWNYVILDEGHLIKNNK 490
Query: 452 TQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGN 511
TQRA+SL EIP AHRI+ISGTPIQNNLKE+W LFNFCCP++LGD + FK +YE ILRGN
Sbjct: 491 TQRAQSLYEIPCAHRIVISGTPIQNNLKEMWTLFNFCCPDVLGDKQQFKIRYETAILRGN 550
Query: 512 DKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLT 571
DK+A REK +GS VAKELRERI+PYFLRRLK+EV + + TL+KKNE+IVWL+LT
Sbjct: 551 DKNATAREKHVGSNVAKELRERIKPYFLRRLKSEVVFDTGASEEKTLAKKNELIVWLKLT 610
Query: 572 SCQRQLYEAFLNSEIVLSAFD--GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLN 629
CQR+LYEAFLNSE+V A SPLAA+TILKKICDHPLLLTK+ AE VL+GM MLN
Sbjct: 611 PCQRKLYEAFLNSELVHLALQPKASPLAAITILKKICDHPLLLTKKGAEGVLEGMGEMLN 670
Query: 630 PEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKM 689
+D + EK+AM++AD+A D+ E ++SCK+SFI+SLL L+ EGH+VLIFSQTRKM
Sbjct: 671 DQDIGMVEKMAMNLADMAHDDNALEVGQDVSCKLSFIMSLLRNLVGEGHHVLIFSQTRKM 730
Query: 690 LNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKAD 749
LNLIQE+I +GY FLRIDGTTK SDR +IV DFQEG AP+FLLT+QVGGLGLTLTKA
Sbjct: 731 LNLIQEAIILEGYAFLRIDGTTKVSDRERIVKDFQEGCGAPVFLLTTQVGGLGLTLTKAT 790
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
RVIVVDPAWNPSTDNQSVDRAYRIGQ K+V+VYRLMT T+EEKIY+ Q+ KG LF+TAT
Sbjct: 791 RVIVVDPAWNPSTDNQSVDRAYRIGQTKNVIVYRLMTSATIEEKIYKLQVLKGALFRTAT 850
Query: 810 EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGI 869
E KEQ RYFS+ +++EL SLP+QGFDVSLT +QL EEHG Q +DESL HIQFL+ GI
Sbjct: 851 EQKEQTRYFSKSEIQELFSLPQQGFDVSLTHKQLQEEHGQQVVLDESLRKHIQFLEQQGI 910
Query: 870 AGVSHHSLLFSKTARVQVVQEEE 892
AGVSHHSLLFSKTA + + E +
Sbjct: 911 AGVSHHSLLFSKTATLPTLSEND 933
>gi|38567839|emb|CAE05788.2| OSJNBb0020J19.17 [Oryza sativa Japonica Group]
Length = 1634
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/714 (60%), Positives = 527/714 (73%), Gaps = 61/714 (8%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
R Y LPG+I NML+PHQREGLRWLW LHC+G GGILGDDMGLGKTMQ+ FLAGLFHSR
Sbjct: 267 RKPYNLPGRIFNMLYPHQREGLRWLWVLHCRGTGGILGDDMGLGKTMQVSAFLAGLFHSR 326
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
LIKR LVVAPKTLL+HW KEL+ V L KIR+Y G R YEL+Y ++ G+LLTTYD
Sbjct: 327 LIKRVLVVAPKTLLTHWTKELSVVSLKDKIRDYSGPNANARNYELKYAFKEGGILLTTYD 386
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
IVRNN K ++G+ F +D +++ +W+Y+ILDEGH+IKNP TQRA+SL EIP AHRI+IS
Sbjct: 387 IVRNNFKMIKGN-FTNDFDDEEETLWNYVILDEGHIIKNPKTQRAQSLFEIPCAHRIVIS 445
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTPIQNNLK +KEL
Sbjct: 446 GTPIQNNLK---------------------------------------------VQSKEL 460
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RERI+PYFLRR+KNEVF + L+KKNE+I+WL+LTSCQRQLYEAFLNSE+V S+
Sbjct: 461 RERIKPYFLRRMKNEVFLDSGTGEDKKLAKKNELIIWLKLTSCQRQLYEAFLNSELVHSS 520
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
GSPLAA+TILKKICDHPLLLTK+AAE VL+GMD+MLN ++ + EK+AM++AD+A D
Sbjct: 521 MQGSPLAAITILKKICDHPLLLTKKAAEGVLEGMDAMLNNQEMGMVEKMAMNLADMAHDD 580
Query: 651 DFQEQH--DNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRID 708
D E ++SCK+SF++SLL L+ EGHNVLIFSQTRKMLN+IQE+I +GYKFLRID
Sbjct: 581 DDVELQVGQDVSCKLSFMMSLLQNLVSEGHNVLIFSQTRKMLNIIQEAIILEGYKFLRID 640
Query: 709 GTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
GTTK S+R +IV DFQEG APIFLLT+QVGGLGLTLTKA RVIVVDPAWNPSTDNQSVD
Sbjct: 641 GTTKISERERIVKDFQEGPGAPIFLLTTQVGGLGLTLTKAARVIVVDPAWNPSTDNQSVD 700
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLS 828
RAYRIGQ KDV+VYRLMT GT+EEKIY+ Q+FKG LF+TATEHKEQ RYFS++D++EL S
Sbjct: 701 RAYRIGQMKDVIVYRLMTSGTIEEKIYKLQVFKGALFRTATEHKEQTRYFSKRDIQELFS 760
Query: 829 LPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVV 888
LP+QGFDVSLTQ+QL EEHG Q MD+SL HIQFL+ GIAGVSHHSLLFSKTA + +
Sbjct: 761 LPEQGFDVSLTQKQLQEEHGQQLVMDDSLRKHIQFLEQQGIAGVSHHSLLFSKTAILPTL 820
Query: 889 QEEE--EATRRK---GTAFVGNSSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKL 943
+ + +++RR + +SS Y+ +GA YA P++ ++ SP + +
Sbjct: 821 NDNDGLDSSRRAMPMAKHYYKGASSDYV----ANGAAYAMKPKE--FIARTYSPNSTSTE 874
Query: 944 KESDIKERIKRLSQLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPEP 997
+IK +I RLSQ ++N V V +LPD+G K+++QI EL+ +L I E PEP
Sbjct: 875 SPEEIKAKINRLSQTLANTVLVAKLPDRGDKIRRQINELDEKLTVI--ESSPEP 926
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/331 (59%), Positives = 242/331 (73%), Gaps = 10/331 (3%)
Query: 574 QRQLYEAFLNSEIVLS---AFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP 630
+R+LYEAFLN + V S A GS L A TIL+KICDHPLLLTKR +D L+ M +MLN
Sbjct: 1169 KRRLYEAFLNKDPVRSQTGALKGSSLEASTILRKICDHPLLLTKRDTDDFLEEMGAMLNN 1228
Query: 631 EDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKML 690
D + E++ + D D + SCKI+FIL LL L+ EGH VLIFSQTR ML
Sbjct: 1229 RDMCMVERI---LEDNLYADKRLQIVQGASCKIAFILPLLRNLVEEGHYVLIFSQTRVML 1285
Query: 691 NLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADR 750
NLIQ+++ +G+KFLRIDGTTK S+R KI+ DFQEG +PI LLTS VGGLG TLTKADR
Sbjct: 1286 NLIQDAVSIEGHKFLRIDGTTKISERKKILKDFQEGLDSPILLLTSHVGGLGNTLTKADR 1345
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE 810
VIVVDPAWNPS DNQSVDRAYRIGQ KDV+VYRL+TCGT+EEKIY++QIFKGGLF+TATE
Sbjct: 1346 VIVVDPAWNPSIDNQSVDRAYRIGQTKDVIVYRLVTCGTIEEKIYKQQIFKGGLFRTATE 1405
Query: 811 HKEQIRYFSQ----QDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDT 866
KEQ ++++Q Q+ +E SLP GFD SLTQ ++ E+G Q MDESL+ HIQFL+
Sbjct: 1406 CKEQPQFYNQDLYLQNEQEYSSLPPHGFDASLTQHKMQVENGQQLVMDESLKKHIQFLEQ 1465
Query: 867 LGIAGVSHHSLLFSKTARVQVVQEEEEATRR 897
GIAGV+ H +LF KT + ++ R+
Sbjct: 1466 QGIAGVNRHGVLFCKTETTATLGDDGAINRK 1496
Score = 96.7 bits (239), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 395 LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDD-AIWDYMILDEGHLIKNPSTQ 453
L +Q+ G+LLT+Y IVRNN LRG+ ++ +++ +WDY+ILDEGH++KN TQ
Sbjct: 1084 LGKTIQEGGILLTSYHIVRNNYMLLRGNGNGNNVDNNEEEPLWDYVILDEGHIVKNTKTQ 1143
Query: 454 RAKSLLEIPSAHRIIISGTPIQNNLK 479
RA+SL +IPSAHRI+++GTPIQN LK
Sbjct: 1144 RAQSLFQIPSAHRIVLTGTPIQNKLK 1169
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH 348
+P ++ L+PHQR+GL WLW+LHC GGIL DDMGLGKT+Q G L +H
Sbjct: 1047 IPRRVLGSLYPHQRDGLAWLWALHCTATGGILADDMGLGKTIQEGGILLTSYH 1099
>gi|414586259|tpg|DAA36830.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea mays]
Length = 894
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/581 (67%), Positives = 467/581 (80%), Gaps = 7/581 (1%)
Query: 274 SDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGL 333
++D ++ G+ S P Y LPGKI MLF HQREGLRWLW LHC+G GGILGDDMGL
Sbjct: 314 TEDFKMDPTGTAATSKP---YKLPGKIFKMLFAHQREGLRWLWVLHCRGTGGILGDDMGL 370
Query: 334 GKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQY 393
GKTMQ+ FLAGLFHSRL+KR L+VAPKTLL+HW KEL+ VGL KIR+Y G R Y
Sbjct: 371 GKTMQVAAFLAGLFHSRLVKRVLIVAPKTLLAHWTKELSIVGLKEKIRDYSGPSTNIRNY 430
Query: 394 ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDD--AIWDYMILDEGHLIKNPS 451
ELQY ++ G+L+TTYDIVRNN K +RG+S+ + DD+ +W+Y+ILDEGHLIKN
Sbjct: 431 ELQYAFKEGGILITTYDIVRNNYKLIRGNSYNNSNDDDDEEGTLWNYVILDEGHLIKNNK 490
Query: 452 TQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGN 511
TQRA+SL EIP AHRI+ISGTPIQNNLKE+W LFNFCCP++LGD + FK +YE ILRGN
Sbjct: 491 TQRAQSLYEIPCAHRIVISGTPIQNNLKEMWTLFNFCCPDVLGDKQQFKIRYETAILRGN 550
Query: 512 DKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLT 571
DK+A REK +GS VAKELRERI+PYFLRRLK+EV + + TL+KKNE+IVWL+LT
Sbjct: 551 DKNATAREKHVGSNVAKELRERIKPYFLRRLKSEVVFDTGASEEKTLAKKNELIVWLKLT 610
Query: 572 SCQRQLYEAFLNSEIVLSAFD--GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLN 629
CQR+LYEAFLNSE+V A SPLAA+TILKKICDHPLLLTK+ AE VL+GM MLN
Sbjct: 611 PCQRKLYEAFLNSELVHLALQPKASPLAAITILKKICDHPLLLTKKGAEGVLEGMGEMLN 670
Query: 630 PEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKM 689
+D + EK+AM++AD+A D+ E ++SCK+SFI+SLL L+ EGH+VLIFSQTRKM
Sbjct: 671 DQDIGMVEKMAMNLADMAHDDNALEVGQDVSCKLSFIMSLLRNLVGEGHHVLIFSQTRKM 730
Query: 690 LNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKAD 749
LNLIQE+I +GY FLRIDGTTK SDR +IV DFQEG AP+FLLT+QVGGLGLTLTKA
Sbjct: 731 LNLIQEAIILEGYAFLRIDGTTKVSDRERIVKDFQEGCGAPVFLLTTQVGGLGLTLTKAT 790
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
RVIVVDPAWNPSTDNQSVDRAYRIGQ K+V+VYRLMT T+EEKIY+ Q+ KG LF+TAT
Sbjct: 791 RVIVVDPAWNPSTDNQSVDRAYRIGQTKNVIVYRLMTSATIEEKIYKLQVLKGALFRTAT 850
Query: 810 EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQ 850
E KEQ RYFS+ +++EL SLP+QGFDVSLT +QL EEHG Q
Sbjct: 851 EQKEQTRYFSKSEIQELFSLPQQGFDVSLTHKQLQEEHGQQ 891
>gi|302789546|ref|XP_002976541.1| hypothetical protein SELMODRAFT_105336 [Selaginella moellendorffii]
gi|300155579|gb|EFJ22210.1| hypothetical protein SELMODRAFT_105336 [Selaginella moellendorffii]
Length = 788
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/737 (55%), Positives = 521/737 (70%), Gaps = 21/737 (2%)
Query: 285 ITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
+ L R ++LPG + ++L+ HQ EGLRWLW LH Q +GGILGDDMGLGKTMQI FL
Sbjct: 58 LVLGEGRWKFILPGNVSSILYEHQHEGLRWLWRLHLQRRGGILGDDMGLGKTMQIAAFLC 117
Query: 345 GLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGV 404
GLFHS+LIKRAL+VAPKTL+ HW KEL VGL K+++Y GT + R+ L +LQ GV
Sbjct: 118 GLFHSKLIKRALIVAPKTLIPHWGKELNVVGLGRKVKDYSGTSISVRESNLDRILQAGGV 177
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
LLTTYDIVR+N+ +L+G D DD WDY+ILDEGHLIKNPSTQRAKSL EIPSA
Sbjct: 178 LLTTYDIVRHNTNALKGEYNFDD----DDVTWDYVILDEGHLIKNPSTQRAKSLKEIPSA 233
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
HRIIISGTPIQNNL+E+WALF+FC PELLGD K FK KYE IL GNDK+A DR+KRIG+
Sbjct: 234 HRIIISGTPIQNNLREMWALFDFCYPELLGDRKEFKAKYETMILSGNDKNATDRQKRIGA 293
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS 584
AVA+EL++R PYFLRRLK +VF + + L+KKN++IVWLRL+ QRQ+Y AFL S
Sbjct: 294 AVAQELQDRFAPYFLRRLKKDVF-PNTGEETQQLAKKNDIIVWLRLSQRQRQMYTAFLRS 352
Query: 585 EIVLSAF----DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
E + GS LAALTILKKICDHPLLLTKRA +DV++G++ L+ D A AE +
Sbjct: 353 ETAQGSLAGSAKGSALAALTILKKICDHPLLLTKRATDDVVEGLE-YLDSTDIAAAEAMR 411
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK 700
+A +AE + + + + SCKI F+++LL+ L+ EGH L+F+QT KML++IQE I +
Sbjct: 412 KSLAGLAEPEPDSDGNKH-SCKIVFLMALLENLVQEGHRTLVFAQTLKMLDIIQEEITKR 470
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
Y F RIDG TK S+R +IV DFQ +G IFLLTSQVGGLGLTLT ADRV++VDPAWN
Sbjct: 471 RYSFCRIDGKTKGSERQRIVEDFQTDGCTVSIFLLTSQVGGLGLTLTAADRVVIVDPAWN 530
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFS 819
PS DNQSVDRAYRIGQ +DV+VYRLMT GT+EEKIYRKQ+FKGGL K ATE EQ RYFS
Sbjct: 531 PSKDNQSVDRAYRIGQLRDVIVYRLMTSGTLEEKIYRKQVFKGGLMKVATERAEQFRYFS 590
Query: 820 QQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLF 879
QQD RELL++PK GFD+S TQQQL+EEH Q +DE L HI+FL+ GIAGVSHH LLF
Sbjct: 591 QQDFRELLTVPKTGFDISPTQQQLYEEHASQFEVDEELAKHIKFLERQGIAGVSHHDLLF 650
Query: 880 SKTARVQVVQEEEEATRRKGTAFVGNSSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKN 939
SK A +EE + + + ++ +S L+ + A+ P+ K + N
Sbjct: 651 SKAAPELPPAADEEVSATASVSSIFSAFTSLLMYFGFSYSSAAYQPQSNYW--KGTQRVN 708
Query: 940 EAKLKESDIKER-----IKRLSQLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKR 994
L +S + R I RLS ++SN+ V +LPD G ++K++ +L EL + +
Sbjct: 709 LVDLDDSQMNVRHLQDNINRLSSMLSNRSLVSKLPDGGENIRKKMKDLEIELEEASRARE 768
Query: 995 PEPGVIDLDDVTGKLQR 1011
E ++D+D+ +
Sbjct: 769 KE--IVDVDEFASAFDK 783
>gi|357128713|ref|XP_003566014.1| PREDICTED: DNA excision repair protein ERCC-6-like [Brachypodium
distachyon]
Length = 673
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/686 (58%), Positives = 493/686 (71%), Gaps = 41/686 (5%)
Query: 288 SGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF 347
+G Y LP +I ML+PHQREGL WLW LHC+G GGILGDDMGLGKTMQ+ FLAGLF
Sbjct: 11 AGSGEAYRLPARIFKMLYPHQREGLGWLWFLHCRGTGGILGDDMGLGKTMQVSAFLAGLF 70
Query: 348 HSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLT 407
HS LI+R LV+APKTL+SHW+KEL+ VGL KI +Y G+ + R ELQ+ Q+ G+LLT
Sbjct: 71 HSGLIRRVLVLAPKTLISHWVKELSLVGLKHKISDYSGSNLNVRDDELQHAFQEGGILLT 130
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
TYDIVR N K +RG + + ++ +WDY+ILDE H IKNP TQRA+SL EIP HRI
Sbjct: 131 TYDIVRINYKLIRGDFYDGADDEEEGKLWDYVILDEAHFIKNPKTQRAQSLFEIPCVHRI 190
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
ISGTPIQNNLKE+WA+F+FCCPELLGD K F+ +YELPI+RGNDK A +R K IGS VA
Sbjct: 191 AISGTPIQNNLKEMWAIFHFCCPELLGDKKEFRTRYELPIIRGNDKDATNRAKHIGSHVA 250
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
KELRERI+PYFL R+K EV ++ + KKNE+I+WL+LT CQRQLY+AFLN +
Sbjct: 251 KELRERIKPYFLPRMKGEVSLDNGLADDQKFPKKNELIIWLKLTDCQRQLYKAFLNCCQL 310
Query: 588 LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSM---LNPEDAALAEKLAMHIA 644
LS S L A+T+LKKICDHP +LTKR+AED+L+GM+ M + +D + EK+A+++A
Sbjct: 311 LSG--TSYLNAITVLKKICDHPQILTKRSAEDILEGMEEMGEVSSSQDMEMVEKMALNLA 368
Query: 645 DVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKF 704
D+A+ DD + +SCK SFILSLL L+ EGHNVLIFSQTRKMLNL QE+I +GYKF
Sbjct: 369 DMAQDDDVVQVGQEVSCKFSFILSLLRNLLEEGHNVLIFSQTRKMLNLKQEAIFLEGYKF 428
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
LRIDG TK S+R +IV DFQEG IFLLT++V GLG TLTKA RV+VVDPAWNPSTDN
Sbjct: 429 LRIDGDTKISERDRIVKDFQEGPGNQIFLLTTKVSGLGFTLTKAARVVVVDPAWNPSTDN 488
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLR 824
QSVD YRIGQ KDV+VYRLM GTVEE IY+ Q+ KGGLF+TATE KEQ RYFSQ ++
Sbjct: 489 QSVDHVYRIGQTKDVIVYRLMRSGTVEETIYKIQVLKGGLFRTATEQKEQTRYFSQSEIE 548
Query: 825 ELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTAR 884
ELLSLP+QGFDVS+T +QL EEHG Q +DESL HI+FL+ GIAGVSHHSLL+SKT
Sbjct: 549 ELLSLPEQGFDVSITHKQLQEEHGQQLVLDESLSKHIEFLEQQGIAGVSHHSLLYSKTEV 608
Query: 885 VQVVQEEEEATRRKGTAFVGNSSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKLK 944
+ + E + +R + +ARN +
Sbjct: 609 LPTLNENDALDKR--------FTHGTCLARNTN--------------------------- 633
Query: 945 ESDIKERIKRLSQLISNKVTVERLPD 970
S+I E I RLS+ +++ RLPD
Sbjct: 634 -SEIPEEINRLSETLASTTLDSRLPD 658
>gi|302783170|ref|XP_002973358.1| hypothetical protein SELMODRAFT_50459 [Selaginella moellendorffii]
gi|300159111|gb|EFJ25732.1| hypothetical protein SELMODRAFT_50459 [Selaginella moellendorffii]
Length = 710
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/721 (56%), Positives = 517/721 (71%), Gaps = 21/721 (2%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
++LPG + ++L+ HQ EGLRWLW LH Q +GGILGDDMGLGKTMQI FL GLFHS+LIK
Sbjct: 1 FILPGNVASVLYEHQHEGLRWLWRLHLQRRGGILGDDMGLGKTMQIAAFLCGLFHSKLIK 60
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVR 413
RAL+VAPKTL+ HW KEL VGL K+++Y GT + R+ L +LQ GVLLTTYDIVR
Sbjct: 61 RALIVAPKTLIPHWGKELNVVGLGRKVKDYSGTSISVRESNLDRILQVGGVLLTTYDIVR 120
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
+N+ +L+G D DD WDY+ILDEGHLIKNPSTQRAKSL EIPSAHRIIISGTP
Sbjct: 121 HNTNALKGEYNFDD----DDVTWDYVILDEGHLIKNPSTQRAKSLKEIPSAHRIIISGTP 176
Query: 474 IQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRER 533
IQNNL+E+WALF+FC PELLGD K FK KYE IL GNDK+A DR+KRIG+AVA+EL++R
Sbjct: 177 IQNNLREMWALFDFCYPELLGDRKEFKAKYETMILSGNDKNATDRQKRIGAAVAQELQDR 236
Query: 534 IQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF-- 591
PYFLRRLK +VF + + L+KKN++IVWLRL+ QRQ+Y AFL SE +
Sbjct: 237 FAPYFLRRLKKDVF-PNTGEETQQLAKKNDIIVWLRLSQRQRQMYTAFLRSETAQGSLAG 295
Query: 592 --DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEK 649
GS LAALTILKKICDHPLLLTKRA +DV++G++ L+ D A AE + +A +AE
Sbjct: 296 SAKGSALAALTILKKICDHPLLLTKRATDDVVEGLE-YLDSTDIAAAEAMRKSLAGLAEP 354
Query: 650 DDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDG 709
+ + + + SCKI F+++LL+ L+ EGH L+F+QT KML++IQE I + Y F RIDG
Sbjct: 355 EPDSDGNKH-SCKIVFLMALLENLVQEGHRTLVFAQTLKMLDIIQEEITKRRYSFCRIDG 413
Query: 710 TTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
TK S+R +IV DFQ +G IFLLTSQVGGLGLTLT ADRV++VDPAWNPS DNQSVD
Sbjct: 414 KTKGSERQRIVEDFQTDGCTVSIFLLTSQVGGLGLTLTAADRVVIVDPAWNPSKDNQSVD 473
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLS 828
RAYRIGQ +DV+VYRLMT GT+EEKIYRKQ+FKGGL K ATE EQ RYFSQQD RELL+
Sbjct: 474 RAYRIGQLRDVIVYRLMTSGTLEEKIYRKQVFKGGLMKVATERAEQFRYFSQQDFRELLT 533
Query: 829 LPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVV 888
+PK GFD+S TQQQL+EEH Q +DE L HI+FL+ GIAGVSHH LLFSK A
Sbjct: 534 VPKTGFDISPTQQQLYEEHASQFEVDEELAKHIKFLERQGIAGVSHHDLLFSKAAPELPP 593
Query: 889 QEEEEATRRKGTAFVGNSSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKLKESDI 948
+EE + + + ++ +S L+ + A+ P+ K + N L +S +
Sbjct: 594 AADEEVSATASFSSIFSAFTSLLMYFGFSYSSGAYQPQSNYW--KGTQRVNLVDLDDSQM 651
Query: 949 KER-----IKRLSQLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPEPGVIDLD 1003
R I RLS ++SN+ V +LPD G ++K++ +L EL + + E ++D+D
Sbjct: 652 NVRHLQDNINRLSSMLSNRSLVSKLPDGGENIRKKMKDLEIELEEASRAREKE--IVDVD 709
Query: 1004 D 1004
+
Sbjct: 710 E 710
>gi|357154997|ref|XP_003576973.1| PREDICTED: DNA excision repair protein ERCC-6-like [Brachypodium
distachyon]
Length = 764
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/591 (62%), Positives = 458/591 (77%), Gaps = 8/591 (1%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y LP ++ ML+ HQ+EGLRWLW+LHC+ GGIL D+MGLGKTM + GFLAGLFHS LIK
Sbjct: 4 YKLPRRLFQMLYRHQQEGLRWLWALHCKATGGILADEMGLGKTMLVSGFLAGLFHSGLIK 63
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVR 413
R+L+VAPK++L+HW+KEL+AVGL KIR+Y GT + R ++LQ +L++ G+LLTTYDIVR
Sbjct: 64 RSLIVAPKSVLTHWVKELSAVGLEDKIRDYTGTSINDRSHQLQCILKEGGILLTTYDIVR 123
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
NNS +RG+ GD++ WDY+ILDEGH+++N TQRA+SL +I SAHRI+I+GTP
Sbjct: 124 NNSSLIRGNYCGDANNGDEEMPWDYVILDEGHIMRNLKTQRAQSLFQIRSAHRIVITGTP 183
Query: 474 IQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRER 533
QNNL E+WALF FCCP++LGD FK +YE P+L GNDK+A D+EK + A E +ER
Sbjct: 184 YQNNLMEMWALFYFCCPDILGDKDEFKVRYEKPLLCGNDKNATDQEKHMSLKAANEFKER 243
Query: 534 IQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLS---A 590
I+PYFLRRL++E+F L +KNE+ +WL+LTSCQRQLYEAFL ++V S A
Sbjct: 244 IKPYFLRRLESELFGNSFEEKDKILPQKNELTIWLKLTSCQRQLYEAFL--KLVHSQTEA 301
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
S L A+TILK ICDHPLLLT+RAAED+ +GM ++ N + L E++ + D D
Sbjct: 302 LKLSSLEAITILKTICDHPLLLTQRAAEDIREGMGTIWNNQAMCLVERI---LEDGLHVD 358
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
+ + ++SCKI FIL LL L+ EGHNVLIFSQ+RKMLN IQESI S+G+K LRIDG
Sbjct: 359 NVLQVVRDVSCKIGFILPLLKNLVEEGHNVLIFSQSRKMLNAIQESIVSEGHKLLRIDGN 418
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
TK S+R KIV DFQ+G API LL+SQVGGLG TLTKA+RVI+VDP+WNPSTDNQSV RA
Sbjct: 419 TKVSERAKIVKDFQDGSGAPILLLSSQVGGLGNTLTKANRVIIVDPSWNPSTDNQSVSRA 478
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLP 830
YRIGQ+KDV+VYRL+TCGT+EEKIY+ Q+FKGGLFKTA EH EQ +YF+Q+D+RE LS P
Sbjct: 479 YRIGQRKDVIVYRLVTCGTIEEKIYKLQVFKGGLFKTAVEHTEQAQYFNQEDMREYLSSP 538
Query: 831 KQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSK 881
+GFDVS TQ QL EEH Q MDESL HIQFL+ GIAGVSHHSLLF +
Sbjct: 539 TEGFDVSPTQHQLQEEHSQQLVMDESLRKHIQFLEQQGIAGVSHHSLLFQR 589
>gi|168012162|ref|XP_001758771.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162689908|gb|EDQ76277.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1211
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/809 (50%), Positives = 516/809 (63%), Gaps = 94/809 (11%)
Query: 264 SGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGK 323
S V L + SD V E + + LS + + L K NML+PHQR G+ WLWSLH +G
Sbjct: 287 SAAVGNLINESD--VPEKQQELVLSDGKHRFCLRPKTANMLYPHQRSGIEWLWSLHMKGM 344
Query: 324 GGILGDDMGLGKTMQ-----------------------------------------ICGF 342
GGILGDDMGLGKTMQ + F
Sbjct: 345 GGILGDDMGLGKTMQSYQHKPSRFYHHKGVTGHPVDVVVAHSNHDNAHRPIRCTGLVAAF 404
Query: 343 LAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK 402
LAGLF ++ IK AL+VAPKTL++HW+KEL VGLS K +Y GT VK R+Y LQ VLQ
Sbjct: 405 LAGLFCTQNIKCALIVAPKTLIAHWVKELKVVGLSRKTYDYSGTSVKAREYALQNVLQMG 464
Query: 403 GVLLTTYDIVRNNSKSLRGSSFISDEAGD--DDAI-WDYMILDEGHLIKNPSTQRAKSLL 459
GVLLTTYD+VR N K+LRG D GD DD I WDYMILDEGHL+KNP+TQRAKSL
Sbjct: 465 GVLLTTYDMVRCNFKALRGDFDGRDGYGDTSDDIITWDYMILDEGHLVKNPNTQRAKSLR 524
Query: 460 EIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNK------------------WFKE 501
EIP+AHRI+ISGTPIQN+L+E+WALF+FCCP+LLGD K FK+
Sbjct: 525 EIPAAHRIVISGTPIQNHLQEMWALFDFCCPDLLGDRKEYAFTLNLFYFDDGRLKNMFKD 584
Query: 502 KYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKK 561
KYE IL G DK+A DR+KRIG VA+ELR++ P+FLRRLK+EVF + + LS+K
Sbjct: 585 KYERQILAGTDKNASDRQKRIGIQVAEELRQKFGPFFLRRLKSEVFPDSEDKKERKLSRK 644
Query: 562 NEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAED 619
N++IVWL L+ Q +LY AFLNS L+ALT++KKICDHP+LLTKRAA D
Sbjct: 645 NDLIVWLPLSEGQEKLYRAFLNSNTAEETLSTGTKVLSALTVMKKICDHPMLLTKRAAND 704
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
+ +GM+ L+ ED AE + +A + + D E SCKI F+++LLD L+ EGH
Sbjct: 705 IAEGMEGYLDAEDIQAAEAMTHSLAGMVQDD---EDMSATSCKIDFLMALLDNLVAEGHR 761
Query: 680 VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
LIF+QTRKMLN+IQ+ I +G+ F RIDGT KA+DR V +FQ D P+FLLTSQVG
Sbjct: 762 TLIFAQTRKMLNIIQDEILERGWIFRRIDGTIKAADRELCVQEFQSDDEIPLFLLTSQVG 821
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGLTLT ADRV++VDPAWNPSTDNQSVDRAYRIGQK DVV+YRLMTCGT+EEKIYRKQ+
Sbjct: 822 GLGLTLTGADRVVIVDPAWNPSTDNQSVDRAYRIGQKNDVVIYRLMTCGTIEEKIYRKQV 881
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEA 859
FKG L K ATE K Q+RYFSQ +L E+ +P+ GF VS TQ QLH+EH QH +DE L+
Sbjct: 882 FKGHLMKVATEKKNQMRYFSQGELGEMFKVPEVGFRVSETQLQLHKEHSSQHKIDEGLQK 941
Query: 860 HIQFLDTLGIAGVSHHSLLFSKTARVQVVQEEEE----AT-RRKGTAFVGNS-------- 906
HI+FLD LGIAGVSHH LLF+K A E+ AT + ++VG+
Sbjct: 942 HIEFLDGLGIAGVSHHDLLFTKEAEPLPPPGSEDQDLNATWEPRNPSYVGHRYKAASKPE 1001
Query: 907 ----SSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISNK 962
+S V R + A +S N LK ++ +++RLS+ + +K
Sbjct: 1002 KYSWEASQAVGRGILATATA--------GLQSQGVDNSNALKVEFLRGKLERLSRTLDDK 1053
Query: 963 VTVERLPDKGTKLQKQIAELNSELNKIKM 991
+ RLPD G L+K++ E EL + ++
Sbjct: 1054 AMIARLPDHGVGLEKKLKETQKELREAEL 1082
>gi|168027824|ref|XP_001766429.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162682338|gb|EDQ68757.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1343
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/750 (52%), Positives = 502/750 (66%), Gaps = 43/750 (5%)
Query: 281 DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQIC 340
+E + L + + L KI NML+PHQR+GL W WSLH +G GGILGDDMGLGKT+Q+
Sbjct: 295 EEKDMVLIKGKHRFTLRAKIANMLYPHQRKGLEWFWSLHTKGMGGILGDDMGLGKTLQVA 354
Query: 341 GFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
FLAGLF ++ IK AL+VAPKTL++HW+KEL VGLS K ++Y GT VK R+ L +VLQ
Sbjct: 355 SFLAGLFCTQNIKCALIVAPKTLIAHWVKELKVVGLSRKTQDYSGTSVKVRESALSHVLQ 414
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISD---EAGDDDAIWDYMILDEGHLIKNPSTQRAKS 457
GVLLTTYD+VR N K+LRG D +A DD WDY+ILDEGHL+KNP+TQRAKS
Sbjct: 415 MGGVLLTTYDMVRCNFKALRGDYNGRDGFGDASDDIITWDYIILDEGHLVKNPNTQRAKS 474
Query: 458 LLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALD 517
L IP+AHRI+ISGTPIQN+L+E+WALF+FCCP LLGD K F+EKYE IL G DK+A D
Sbjct: 475 LRAIPAAHRIVISGTPIQNHLQEMWALFDFCCPNLLGDRKEFREKYERQILAGTDKNASD 534
Query: 518 REKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQL 577
R+KRIG VA+ELR++ PYFLRRLK+EVF E + LSKKN++IVWL L+ CQ +L
Sbjct: 535 RQKRIGIQVAEELRQKFAPYFLRRLKSEVFPESNNLEERKLSKKNDLIVWLPLSKCQERL 594
Query: 578 YEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAAL 635
Y AFLNS L+ALT++KKICDHP LLTKRAA D+ +GM+ L+ ED
Sbjct: 595 YRAFLNSNAAEETLSTGTRVLSALTVMKKICDHPSLLTKRAAIDIAEGMEGYLDGEDIQA 654
Query: 636 AEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQE 695
AE + +A + E D SCKI F+++LL+ L+ EGH LIF+QTRKML++IQ+
Sbjct: 655 AEAMTRSLAGMVEDDRVH----GASCKIDFLMALLENLVTEGHRTLIFAQTRKMLDIIQD 710
Query: 696 SIGSKGYKFLRIDGTTKASDRVKIVN------------------------DFQEGDVAPI 731
I +G+ F RIDGT KA+DR + V +FQ + P+
Sbjct: 711 EILDRGWIFRRIDGTIKAADREQCVQASGVHGAEIEARCELIVRPRVAVWEFQSDNDIPL 770
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
FLLTSQVGGLGLTLT A+RV++VDPAWNPSTDNQSVDRAYRIGQKK+VVVYRLMTCGT+E
Sbjct: 771 FLLTSQVGGLGLTLTGANRVVIVDPAWNPSTDNQSVDRAYRIGQKKNVVVYRLMTCGTIE 830
Query: 792 EKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQH 851
EKIYRKQ+FKG L K ATE K Q+RYFSQ +L E+ +P+ GF VSLTQQQLH+EH Q+
Sbjct: 831 EKIYRKQVFKGHLMKVATEKKNQMRYFSQGELGEMFKVPEAGFRVSLTQQQLHKEHFRQY 890
Query: 852 NMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVVQEEEE-----ATRRKGTAFV--- 903
+DE L HI FL LGIAGVSHH LLF+K + +E+ + + +++V
Sbjct: 891 KIDEELGEHIHFLAELGIAGVSHHDLLFTKAEPLPPPGYDEDEDLKASWEPRNSSYVEQH 950
Query: 904 --GNSSSSYLVARNVDGAEYAFNPRDIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISN 961
S S V + R + S N+ LK ++ +++RL + + +
Sbjct: 951 FKAASKSEKYVQETSQAVGRSILSRSAPKGLQPRSNANDNLLKVQFLRSKLERLYRTLDD 1010
Query: 962 KVTVERLPDKGTKLQKQIAELNSELNKIKM 991
K + R+ GT L K+I E +L + ++
Sbjct: 1011 KALLSRVQVHGTSLDKKINETEHDLREAEL 1040
>gi|449526977|ref|XP_004170489.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial [Cucumis
sativus]
Length = 516
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/509 (68%), Positives = 422/509 (82%), Gaps = 4/509 (0%)
Query: 499 FKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATL 558
FKE YE ILRGNDK A +R+KRIGS VAK LRERIQPYFLRR+K+EVF+ED+ ++ L
Sbjct: 1 FKEHYESAILRGNDKKASERDKRIGSVVAKGLRERIQPYFLRRMKSEVFNEDNDQAATKL 60
Query: 559 SKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAE 618
SKKN++IVWLRLTSCQRQLYEAFL S++ LSAFDGS LAALTILKKICDHPLLLTKRAAE
Sbjct: 61 SKKNDIIVWLRLTSCQRQLYEAFLKSDLALSAFDGSVLAALTILKKICDHPLLLTKRAAE 120
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
+VL+GM+++L+PEDA +AEKLA +ADV ++D ++ DN+SCKISFI+SLLD L+P+GH
Sbjct: 121 EVLEGMETVLSPEDAGVAEKLAKRLADVVDRDFYEVYDDNVSCKISFIMSLLDNLVPKGH 180
Query: 679 NVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
++LIFSQTRKMLNL+++S+ S Y+FLRIDGTTKA DRVKIVNDFQEG A IFLLTSQV
Sbjct: 181 SILIFSQTRKMLNLLEKSLLSNDYEFLRIDGTTKAMDRVKIVNDFQEGRGASIFLLTSQV 240
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLGLTLT+ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDV+VYRLMTCGTVEEKIYRKQ
Sbjct: 241 GGLGLTLTRADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVIVYRLMTCGTVEEKIYRKQ 300
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLE 858
++KGGLFKTATEHKEQIRYFSQQDLREL SLP++GFD S+TQQQ+HEEH Q MDESL
Sbjct: 301 VYKGGLFKTATEHKEQIRYFSQQDLRELFSLPEEGFDTSVTQQQMHEEHDQQLAMDESLR 360
Query: 859 AHIQFLDTLGIAGVSHHSLLFSKTARVQVVQEEEEAT---RRKGTAFVGNSSSSYLVARN 915
+HI+FL+T GIAGVSHH+LLFSKTA V EEE T R + F +SS +
Sbjct: 361 SHIKFLETQGIAGVSHHNLLFSKTAPEPVYALEEEDTSFRRNREFGFRDRPTSSSSSDHD 420
Query: 916 VDGAEYAFNPRDIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISNKVTVERLPDKGTKL 975
++GA YAFNP+D+KLN+ +++ + K +++K RI RLSQ + NKV + RLPD+G ++
Sbjct: 421 INGARYAFNPKDVKLNRSTTNSSSPGKPTVNELKYRINRLSQTLENKVLISRLPDRGERI 480
Query: 976 QKQIAELNSELNKIKMEKRPEPGVIDLDD 1004
KQI ELN +L++++ K E VI++ D
Sbjct: 481 HKQIDELNLQLSELR-RKEHESEVIEIAD 508
>gi|302830326|ref|XP_002946729.1| hypothetical protein VOLCADRAFT_120362 [Volvox carteri f.
nagariensis]
gi|300267773|gb|EFJ51955.1| hypothetical protein VOLCADRAFT_120362 [Volvox carteri f.
nagariensis]
Length = 1229
Score = 554 bits (1427), Expect = e-154, Method: Compositional matrix adjust.
Identities = 319/784 (40%), Positives = 457/784 (58%), Gaps = 104/784 (13%)
Query: 281 DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQIC 340
+ GS+ L G Y+L + L+PHQ +G++WLW+L +GGILGDDMGLGKTMQI
Sbjct: 352 EPGSLVL-GEDQQYVLGAHVAQKLYPHQVQGVKWLWNLFSMQRGGILGDDMGLGKTMQIS 410
Query: 341 GFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
FLAGLF S+L++RA+++APKTLL HWIKELT GL E+FG R L+ V+
Sbjct: 411 AFLAGLFGSQLVRRAIIIAPKTLLPHWIKELTVCGLRNLTHEFFGNSESERSAALRGVVS 470
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+GV++TTY +V++NS+ L + S D WD M+LDEGH IKNP + + L +
Sbjct: 471 GRGVIVTTYGMVQHNSEQLARPAHSSR---DHAFTWDVMLLDEGHKIKNPKMKLVEHLNK 527
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+P+ R+IISGTPIQNNL E+ +LF+F LLGD K FK+ YE PI +G DK A RE+
Sbjct: 528 LPARVRVIISGTPIQNNLMEMHSLFDFTTTGLLGDAKTFKKNYERPITKGLDKEATARER 587
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFH------------EDDVTSSAT----------- 557
+ G+A+A ELR+R++PYFLRR K +V D TS +
Sbjct: 588 QTGAAIAAELRQRVEPYFLRREKKDVLRNDSSSSSNDVGGRGDATSESGPSSSSGSAAGV 647
Query: 558 ----------LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD--GSPLAALTILKKI 605
L +KN+M R++Y AFL+++ V + SPLAA+T+LKKI
Sbjct: 648 APQVGQRARGLPRKNDM----------RKIYTAFLHTDSVRQVLNEKASPLAAITVLKKI 697
Query: 606 CDHPLLLTKRAAEDVLDG--------------MDSMLNPEDAAL---------------- 635
CDHP LL++RAA +V+ G MD + D +
Sbjct: 698 CDHPALLSQRAANNVIKGAHRWAKHGGSQRREMDDFIVYSDEDIVDSSDSDDAEGGKHGD 757
Query: 636 AEKLAMHIADVAEKD-----DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKML 690
E A + D A D + +++ SCK +F+L+LL +L EGH LIFSQ++ ML
Sbjct: 758 GEPPAGWLEDGAGLDTELARELEQRGAEASCKSAFVLALLGRLHAEGHRTLIFSQSKVML 817
Query: 691 NLIQESIGSKGYKFLRIDG-TTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKAD 749
++++ + + + RIDG A +R V FQ ++ P+FLLTSQVGGLGLTLT AD
Sbjct: 818 SILEAGVKAMKLSYCRIDGDVASAEERQAHVQRFQNSNI-PVFLLTSQVGGLGLTLTAAD 876
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
RVI+VDPAWNPS D+QSVDRAYR+GQ +DVVVYRL+TCGTVEEKIYR+Q+FKGGL KT T
Sbjct: 877 RVIIVDPAWNPSVDDQSVDRAYRMGQTRDVVVYRLITCGTVEEKIYRRQVFKGGLSKTGT 936
Query: 810 EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTL-G 868
E Q RYF+Q +LR+L S+ +G S+TQ QLHE HG Q + E + H++ + +
Sbjct: 937 EEGIQFRYFTQTELRDLFSVTTEGLQQSVTQSQLHEMHGHQRDASEDVRRHLEQVRRMDS 996
Query: 869 IAGVSHHSLLFSKTARVQVVQEEEEATRRKGTAFVGNSSSSYLVARNVDGAEYAFNPRDI 928
+AG+ H+LLF++ +E + ++G A + + S V + A+ +
Sbjct: 997 VAGIHDHNLLFTRRP------DEHVPSAQEGRAILNQMTGSGPVGLDALTAKLGSG---L 1047
Query: 929 KLNKKSSSPKNEAKLKESDIKERIKRLSQLISNKVT------VERLPDKGTKLQKQIAEL 982
KL+ + K +A++ E ++ + + I+N + +PD+G K++ + E+
Sbjct: 1048 KLDSRVEDTKRQAQINE--LRNEVVKSKNAIANYESFISSGKAGAMPDRGAKVRAVLQEV 1105
Query: 983 NSEL 986
++L
Sbjct: 1106 RTKL 1109
>gi|241074609|ref|XP_002408725.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492547|gb|EEC02188.1| conserved hypothetical protein [Ixodes scapularis]
Length = 1216
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 285/667 (42%), Positives = 404/667 (60%), Gaps = 41/667 (6%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y+ G I L+ +QREGL W+W L+ + +GG+LGDDMGLGKT+Q+ FL+G+F + LIK
Sbjct: 9 YVYEG-IEKKLYAYQREGLLWMWGLYLKKRGGVLGDDMGLGKTVQVIAFLSGMFDADLIK 67
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVR 413
L++ P +L+ +W KE A ++ +Y + K ++ L V GVLLT+Y +V+
Sbjct: 68 SVLLIMPVSLIPNWKKEFQAWAPGIRVFDYHSSTKKEKERSLARVQNRGGVLLTSYGMVQ 127
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
+++ L G +W Y+ILDEGH IKNP T+ K++ E+P+ HR++++GT
Sbjct: 128 TSAEILSAQ-------GGRKFVWCYLILDEGHKIKNP-TKTTKAVYELPAKHRLVLTGTA 179
Query: 474 IQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
IQNNL+ELWAL+NF LLG FK +YE I R +K A E+ +G ++K L E
Sbjct: 180 IQNNLRELWALYNFAHQGTLLGSLATFKSQYETHINRSREKDATAGERLLGIEISKNLME 239
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSAT---------LSKKNEMIVWLRLTSCQRQLYEAFLN 583
+I P+FLRR K EV + T T +KKN+++VW+ L+ Q+++Y FL
Sbjct: 240 KISPFFLRRTKAEVLENKENTEQETDSLRPKLCFTAKKNDLVVWVYLSEVQKKIYREFLE 299
Query: 584 SEIVLSAF--DGSPLAALTILKKICDHPLLLTKRAAEDVLDGM-DSMLNPEDAALAEKL- 639
SE V + SPL LTILKKICDHP LL+KRA V GM D M + +K
Sbjct: 300 SEEVANILMTKKSPLVQLTILKKICDHPRLLSKRAC--VQMGMYDDMTQDQIEEFLDKEE 357
Query: 640 --AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESI 697
+M I+DV + E S K++F+L LL L EGH L FSQ+RK+L++IQ +
Sbjct: 358 GNSMTISDVPDDTLLAE-----SGKMTFVLELLLNLKSEGHRTLFFSQSRKILDIIQRIL 412
Query: 698 GSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDP 756
++G++ R+DGT TK +R ++V FQ +A IFLLT+QVGG+GLTLT ADRV++ DP
Sbjct: 413 LNRGFRVTRLDGTITKLCERDRLVTQFQTRSLADIFLLTTQVGGVGLTLTSADRVVIYDP 472
Query: 757 AWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT-EHKEQI 815
+WNP+TD Q+VDRAYRIGQ K+VVVYRL+TC TVEEKIYR+QIFK + K T + ++ +
Sbjct: 473 SWNPATDAQAVDRAYRIGQSKNVVVYRLVTCSTVEEKIYRRQIFKDSIIKQTTGKQRDPV 532
Query: 816 RYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHH 875
RYF++Q+LREL +L S TQ QL E H D L+ HI+F++ + GVSHH
Sbjct: 533 RYFTKQELRELFTLEDPSH--SATQVQLAEMHSHHKRTDHGLDVHIEFIERRNVFGVSHH 590
Query: 876 SLLFSKTARV----QVVQEEEEATR-RKGTAFVGNSSSSYLVARNVDGAEYAFNPRDIKL 930
L+FS+ V + V E+E R R A +S + V + E P +I +
Sbjct: 591 DLMFSEETAVDGPEEYVDGEKEHVRMRVEIAHRMVTSEADFVMGEIQNKESYTVPLNITV 650
Query: 931 NKKSSSP 937
+ P
Sbjct: 651 KTRQPVP 657
>gi|327286256|ref|XP_003227847.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 1310
Score = 504 bits (1298), Expect = e-139, Method: Compositional matrix adjust.
Identities = 283/688 (41%), Positives = 419/688 (60%), Gaps = 60/688 (8%)
Query: 225 FVSGGREEYDD---EDDCVIVSGKLVVNRPDRRDGKLNKSAHSGLVNVLDDYSDDSVLED 281
+VS G++E D E+ + L ++ ++ + K + LD +DS ++
Sbjct: 11 YVSKGKQEARDGNLEESIRLFRQALAIHPSEKLTKNIKKMEEALASLALDQEEEDSFVD- 69
Query: 282 EGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGK-GGILGDDMGLGKTMQIC 340
+ SG M+ G++ + LF HQREG+ +L+ L+ GK GGIL DDMGLGKT+QI
Sbjct: 70 ---VCQSG----LMMYGEMYDKLFEHQREGVAFLYGLYRDGKKGGILADDMGLGKTIQII 122
Query: 341 GFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
FL+G+F IK L++ P TL+S+W KE + +++ + GTC+ R L+++ +
Sbjct: 123 AFLSGMFDEEHIKSVLLIVPTTLISNWTKEFASWTPGLRVKVFHGTCIAERNRNLEWIQR 182
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+LLTTY +V NN + L +SF G+ + +WDY ILDE H IK PS + KS+
Sbjct: 183 RHGILLTTYQMVLNNWQQL--ASF-----GNKEFVWDYAILDEAHKIKTPSAKTTKSVHA 235
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDRE 519
IPS +RI+++GTP+QNNLKELWALF+F C LLG K F+ +YE PI R K A E
Sbjct: 236 IPSKNRILLTGTPVQNNLKELWALFDFACQGSLLGTMKTFRMEYENPITRARAKDATPGE 295
Query: 520 KRIGSAVAKELRERIQPYFLRRLKNEVFH---------------EDDVTSSATLSKKNEM 564
K +G +++ L I+PYFLRR K+E+ +D +L +KN+
Sbjct: 296 KALGLKISENLMSIIKPYFLRRSKDELKKTVNLEQKSNLPALQSKDAAPPMPSLPRKNDF 355
Query: 565 IVWLRLTSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDV 620
IVW+ L Q ++Y F++ E++++ SPLA L ILKK+CDHP LL+ RA +
Sbjct: 356 IVWVYLAPIQEEIYRKFISLDHIKELLMTT--RSPLAELNILKKLCDHPRLLSARACSQL 413
Query: 621 LDGMDSM----LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
G+++ L+ ++ + L +I ++++ +E S K+ F+++LLD+L E
Sbjct: 414 --GLETSSCYDLDGDENEANDVLHQNIEHLSDQVLIEE-----SGKLLFLVALLDRLQEE 466
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLT 735
GH L+FSQ+RKML++I+ + + +K +RIDGT T ++R K + FQ+ +FLLT
Sbjct: 467 GHRTLVFSQSRKMLDIIERILTRRRFKLMRIDGTVTHLTEREKRIGMFQKNSEYSVFLLT 526
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDRAYRIGQK +VV+YRL+TCGTVEEKIY
Sbjct: 527 TQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRAYRIGQKANVVIYRLITCGTVEEKIY 586
Query: 796 RKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSL--PKQGFDVSLTQQQLHEEHGDQHN 852
R+Q+FK L + +T E K RYFS Q+LREL +L P+ S TQ QL H Q
Sbjct: 587 RRQVFKDSLIRQSTGEKKNPYRYFSNQELRELFTLEDPRS----SSTQLQLQSLHSSQRK 642
Query: 853 MDESLEAHIQFLDTLGIAGVSHHSLLFS 880
D L+ HI +L +L I G+S H L+++
Sbjct: 643 TDTQLDEHIAYLHSLEIFGISDHDLMYT 670
>gi|363732948|ref|XP_420137.3| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Gallus gallus]
Length = 1280
Score = 498 bits (1281), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/639 (42%), Positives = 397/639 (62%), Gaps = 40/639 (6%)
Query: 280 EDEGS-ITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGK-GGILGDDMGLGKTM 337
ED+G+ + + G S +L G++ LF HQREG+ +L+ LH +G+ GGIL DDMGLGKT+
Sbjct: 69 EDDGNFVDVCG--SGLLLYGEMHAKLFQHQREGVAFLYRLHREGRPGGILADDMGLGKTI 126
Query: 338 QICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQY 397
QI FL+G+F S LI+ L++ P TL+S W+ E +++E+ GT R L+
Sbjct: 127 QIIAFLSGMFDSELIRHVLLIMPTTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNLEK 186
Query: 398 VLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKS 457
+ + G+++T+Y ++ NN K L D +WDY+ILDE H IK PS + K
Sbjct: 187 IQRKNGIVITSYQMLINNWKQLAS-------CHGQDFVWDYIILDEAHKIKCPSNKTTKC 239
Query: 458 LLEIPSAHRIIISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHAL 516
+ IP+ HR++++GTP+QNNL+E+W+LF+F C LLG K F+ +YE PI R +K A
Sbjct: 240 VYAIPAKHRLLLTGTPLQNNLQEMWSLFDFACQGSLLGTAKTFRMEYENPITRAREKDAT 299
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEV-----------FHEDDVTSSA----TLSKK 561
EK +G +++ L I+PYFLRR K+++ ED SA +L++K
Sbjct: 300 VGEKALGLKISENLMTIIKPYFLRRTKDDIKKNHAEKSDTPLPEDPREPSAPVMPSLTRK 359
Query: 562 NEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAED 619
N+ +VW+ L Q ++Y FL + V SPLA LT+LKK+CDHP LL+ RA
Sbjct: 360 NDFVVWVYLAPVQEKIYRNFLCLDHVKEVLTTTRSPLAELTVLKKLCDHPRLLSARACTQ 419
Query: 620 V-LDGMDSM-LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
+ LDG + + + E A A I ++++ QE S K+ F++ LL +L EG
Sbjct: 420 LDLDGQEYLEQDHESEAAVLSGANKIDHLSDETLIQE-----SGKMLFLVGLLGRLREEG 474
Query: 678 HNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTS 736
H L+FSQ+RKML++I+ + S+ +K +RIDGT T ++R K +N FQ +FLLT+
Sbjct: 475 HRTLVFSQSRKMLDIIERVLSSRQFKIMRIDGTVTHLTEREKRINAFQSNKDYSVFLLTT 534
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
QVGG+G+TLT A+RV++ DP+WNP+TD Q+VDRAYRIGQK++VV+YRL+TCGTVEEKIYR
Sbjct: 535 QVGGVGITLTAANRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYR 594
Query: 797 KQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDE 855
+Q+FK L + T + K RYFS+Q+LREL +L + S TQ QL H Q D
Sbjct: 595 RQVFKDSLIRQTTGDKKNPFRYFSKQELRELFTL--EDTRTSTTQIQLQSLHATQRQTDV 652
Query: 856 SLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVVQEEEEA 894
L+ HI +L +L + G+S H L+F++ + E EEA
Sbjct: 653 QLDEHIAYLHSLEMFGISDHDLIFTREVTHEEQAESEEA 691
>gi|351705605|gb|EHB08524.1| DNA excision repair protein ERCC-6-like protein [Heterocephalus
glaber]
Length = 1181
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 279/668 (41%), Positives = 408/668 (61%), Gaps = 59/668 (8%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHC-QGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF HQ+EG+ +L+SL+ + KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 28 SGLLLYRELYNQLFEHQKEGVAFLYSLYKDKRKGGILADDMGLGKTVQIIAFLSGMFDAS 87
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ AL++ P L+S W+KE + +++ + G R L V Q GV++TTY
Sbjct: 88 LVNHALLIMPTNLISMWVKEFSKWTPGMRVKTFHGPSKDERTRSLNRVQQRNGVVITTYQ 147
Query: 411 IVRNNSKSL---RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + L G F+ WDY+ILDE H IK+ ST+ A IP+++R+
Sbjct: 148 MLINNWQQLSSCNGQVFV----------WDYVILDEAHKIKSSSTKSAICARAIPASNRL 197
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI+R +K A EK +G +
Sbjct: 198 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIVRAREKDATPGEKALGLKI 257
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L E I+PYFLRR K EV D + +LS+KN++I+W+RL
Sbjct: 258 SENLMEIIKPYFLRRTKEEVQKTKSNIPEVRPTEKNSGVDAICEMPSLSRKNDLIIWIRL 317
Query: 571 TSCQRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDV------LD 622
Q ++Y F++ + + L SPLA L +LKK+CDHP LL+ R + +
Sbjct: 318 VPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSTRVCHLLHLGTAKIS 377
Query: 623 GMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLI 682
G D N ED++ + +A H+ D D E+ S K+ F++ LL +L EGH L+
Sbjct: 378 GQDG--NEEDSSDVDAIA-HVTD----DTLMEE----SGKMIFLIDLLKRLRDEGHQTLV 426
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
FSQ+R++LN+I+ + +K +K LRIDGT T +R K +N FQ+ +FLLT+QVGG+
Sbjct: 427 FSQSRQILNIIERLLRNKHFKILRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGV 486
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK
Sbjct: 487 GLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFK 546
Query: 802 GGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAH 860
G L + T + K RYF++Q+LREL ++ + S TQ QL H Q D++L+ H
Sbjct: 547 GSLIRQTTGDKKNPYRYFNKQELRELFTV--EDLQNSATQLQLQSLHAAQRRSDKTLDEH 604
Query: 861 IQFLDTLGIAGVSHHSLLFSKTARVQ----VVQEEEEATRRKGTA-FVGNSSSSYLVARN 915
I +L +LGIAG+S H L++++ V+ V++E + +R A F+ S V +
Sbjct: 605 ITYLHSLGIAGISDHDLIYTRDLSVKEELDVIEESQYIQQRVQKAQFLVEFESQNTVEKQ 664
Query: 916 VDGAEYAF 923
G E A+
Sbjct: 665 RTGNEGAW 672
>gi|348578047|ref|XP_003474795.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia
porcellus]
Length = 1242
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 274/642 (42%), Positives = 393/642 (61%), Gaps = 52/642 (8%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF HQ+EG+ +L+SL+ G KGG+L DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELYNQLFEHQKEGVAFLYSLYRDGRKGGVLADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L+S W+KE + + + G R L V Q GVL+TTY
Sbjct: 144 LVTHVLLIMPTNLISMWVKEFAKWTPGMRAKTFHGPSKGERTRSLLRVQQKTGVLITTYQ 203
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ NN + L SSF +WDY+ILDE H IK+ ST+ A +P+++R++++
Sbjct: 204 MLINNWQQL--SSF-----NGQAFVWDYVILDEAHKIKSSSTKSATYARAVPASNRLLLT 256
Query: 471 GTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
GTPIQNNL+ELW+LF+F C LLG K FK +YE PI+RG +K A EK +G +++
Sbjct: 257 GTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYETPIVRGREKDATSGEKALGLKMSEN 316
Query: 530 LRERIQPYFLRRLKNEV----------------FHEDDVTSSATLSKKNEMIVWLRLTSC 573
L E I+PYFLRR K E+ D + +LS+KN++I+W+RL
Sbjct: 317 LMEIIKPYFLRRTKEEIQKNRLNIPEVGPTEKNLGVDTIYRMPSLSRKNDLIIWIRLVPL 376
Query: 574 QRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDV------LDGMD 625
Q ++Y+ F++ + + L SPLA L +LKK+CDHP LL+ RA + + D
Sbjct: 377 QEEIYKKFVSLDYIKELLMETHSPLAELGVLKKLCDHPRLLSARACRLLHLEAIKISAQD 436
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQ 685
N ED++ + LA H D ++ S K+ F++SLL +L EGH L+FSQ
Sbjct: 437 E--NEEDSSDVDNLA-HATDTTLMEE--------SGKMLFLISLLKRLRDEGHQTLVFSQ 485
Query: 686 TRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
+R++LN+I+ + +K +K LRIDGT T +R K ++ FQ+ +FLLT+QVGG GLT
Sbjct: 486 SRQILNIIERLLKNKHFKILRIDGTVTHLLEREKRISLFQQNKDYSVFLLTTQVGGAGLT 545
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
LT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+QIFK L
Sbjct: 546 LTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQIFKDSL 605
Query: 805 FKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQF 863
+ T + K RYFS+QDLREL ++ + S TQ QL H Q D++L+ HI +
Sbjct: 606 IRQTTGDKKNPFRYFSKQDLRELFTV--EDLQNSATQLQLQSLHAAQRRSDKNLDEHITY 663
Query: 864 LDTLGIAGVSHHSLL----FSKTARVQVVQEEEEATRRKGTA 901
L +LGIAG+S H L+ S + V++E + +R A
Sbjct: 664 LQSLGIAGISDHDLIHTGDLSAKEELDVIEESQYVQQRAQKA 705
>gi|348570656|ref|XP_003471113.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia
porcellus]
Length = 1263
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 277/665 (41%), Positives = 407/665 (61%), Gaps = 49/665 (7%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHC-QGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF HQ+EG+ +L+SL+ + KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 109 SGLLLYRELYNQLFEHQKEGIAFLYSLYRDERKGGILADDMGLGKTVQIIAFLSGMFDAS 168
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L+S W+KE + +++ + G R L V Q GV++TTY
Sbjct: 169 LVHHVLLIMPTNLISMWMKEFSKWTPGIRVKTFHGPSKNERTRSLNRVQQKNGVIITTYQ 228
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ NN + L SSF +WDY+ILDE H IK+ ST+ A + +P+ +R++++
Sbjct: 229 MLINNWQQL--SSF-----NGQAFVWDYVILDEAHKIKSSSTKSAICVRAVPARNRLLLT 281
Query: 471 GTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
GTPIQNNL+ELW+LF+F C LLG K FK +YE PI+R +K A E+ +G +++
Sbjct: 282 GTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIVRAREKDATPGERALGLKISEN 341
Query: 530 LRERIQPYFLRRLKNEV-----------FHE-----DDVTSSATLSKKNEMIVWLRLTSC 573
L E I+PYFLRR K V + E D + +LS+KNE+I+W+RL
Sbjct: 342 LMEIIKPYFLRRTKEVVQKKKSDISEVRYTEVNSGVDAICEMPSLSRKNELIIWIRLVPL 401
Query: 574 QRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
Q ++Y F++ + + L SPLA + +LKK+CDHP LL+ RA +L + + +
Sbjct: 402 QVEIYRKFVSLDHIKELLKETCSPLAEIGVLKKLCDHPRLLSTRACH-LLHLETAKTSAQ 460
Query: 632 DAALAEKLAM----HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
D L + H+ D D E+ S K+ F++ LL +L EGH L+FSQ+R
Sbjct: 461 DENKENSLGIDDISHVTD----DTLMEE----SGKMIFLIDLLKRLRDEGHQTLVFSQSR 512
Query: 688 KMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLT 746
++LN+I+ + +K +K LRIDGT T +R K +N FQ+ +FLLT+QVGG+GLTLT
Sbjct: 513 QILNIIERLLRNKHFKILRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLTLT 572
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FKG L +
Sbjct: 573 AATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKGSLIR 632
Query: 807 TAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLD 865
T + K RYFS+Q+LREL + + S TQ QL H Q + D++L+ HI +L
Sbjct: 633 QTTGDKKNPFRYFSKQELRELFMI--EDLQKSATQLQLQSLHAAQRSSDKTLDEHIVYLH 690
Query: 866 TLGIAGVSHHSLLFSKTARVQ----VVQEEEEATRRKGTA-FVGNSSSSYLVARNVDGAE 920
+LGIAG+S H L+++ V+ V+QE + +R A F+ S S + + G+E
Sbjct: 691 SLGIAGISDHDLIYTCDLSVKEELDVIQESQYIQQRVQKAQFLVESESQNTLEKQRMGSE 750
Query: 921 YAFNP 925
+ P
Sbjct: 751 GVWPP 755
>gi|301780254|ref|XP_002925544.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda
melanoleuca]
Length = 1240
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/624 (42%), Positives = 383/624 (61%), Gaps = 49/624 (7%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHNQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAT 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L+S WIKE +++ + G R L + Q GV++TTY
Sbjct: 144 LVSHVLLIMPTNLISTWIKEFVKWTPGMRVKAFHGPSKDERTRNLSRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + SL G F+ WDY+ILDE H IK ST+ A +P+ +RI
Sbjct: 204 MLINNWQQLSSLNGQEFV----------WDYVILDEAHKIKTSSTKSAICARAVPARNRI 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K EV + D + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEEVQKKKASTPEVRLGEKNPDVDAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
Q ++Y F++ + + L SPLA L +LKK+CDHP LL+ RA +L
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACH--------LL 425
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLIFS 684
N + + A D ++ D + D+ S K+ F++ LL +L EGH L+FS
Sbjct: 426 NLGSVKFSVQGANEGEDASDVDHIDQITDDTLMEESGKMIFLIELLKRLRDEGHQTLVFS 485
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
Q+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT+QVGG+GL
Sbjct: 486 QSRQILNIIEHLLKNRHFKILRIDGTVTHLVEREKRINLFQQNKDYSVFLLTTQVGGVGL 545
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
TLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK
Sbjct: 546 TLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDS 605
Query: 804 LFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQ 862
L + T + K RYF++Q+LREL ++ + F S TQ QL H Q D++L+ HI
Sbjct: 606 LIRQTTGDKKNPFRYFTKQELRELFTI--EDFQNSATQLQLQSLHAAQRRSDKTLDEHIA 663
Query: 863 FLDTLGIAGVSHHSLLFSKTARVQ 886
+L +LGIAG+S H L++++ V+
Sbjct: 664 YLHSLGIAGISDHDLMYTRDLSVK 687
>gi|344281916|ref|XP_003412722.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Loxodonta africana]
Length = 1280
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/614 (43%), Positives = 377/614 (61%), Gaps = 47/614 (7%)
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+L ++ N LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F + L+
Sbjct: 135 LLYRELHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAALVN 194
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVR 413
L++ P L+S W+KE +++ + G R L + Q GV++TTY ++
Sbjct: 195 HVLLIMPTNLISTWVKEFVKWTPGMRVKAFHGPSKDERTRNLSRIQQRNGVIITTYQMLI 254
Query: 414 NNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
NN + SL G F+ WDY+ILDE H IK ST+ A IP+ +RI+++
Sbjct: 255 NNWQQLSSLNGQEFV----------WDYVILDEAHKIKTSSTKSATCARAIPAKNRILLT 304
Query: 471 GTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
GTPIQNNL+ELW+LF+F C LLG K FK +YE PI++ +K A EK +G +++
Sbjct: 305 GTPIQNNLQELWSLFDFACQGSLLGTLKTFKMQYENPIIKAREKDATPGEKALGFKISEN 364
Query: 530 LRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRLTSC 573
L I+PYFLRR K EV + D + +LS+KN++I+W+RL
Sbjct: 365 LMAIIKPYFLRRTKEEVQEKKLSNPEIRHSKKNPDVDAICEMPSLSRKNDLIIWIRLVPL 424
Query: 574 QRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDV-LDGMDSML 628
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA + L G
Sbjct: 425 QEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACCLLNLKGSKFSS 482
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRK 688
E+ HI V + E S K+ F++ LL +L EGH L+FSQ+R+
Sbjct: 483 QNENEGEGSSDVGHIDQVTDATLINE-----SGKMIFLMELLKRLRDEGHQTLVFSQSRQ 537
Query: 689 MLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
+LN I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT+QVGG+GLTLT
Sbjct: 538 ILNFIEHVLKNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTA 597
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+QIFK L +
Sbjct: 598 ATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQIFKDSLRRQ 657
Query: 808 AT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDT 866
T + K RYFS+Q+LREL ++ + F S TQ QL H DQ D+ L+ HI +L +
Sbjct: 658 TTGDKKNPFRYFSKQELRELFTI--EDFQNSATQLQLQSLHADQRRSDKKLDEHIAYLHS 715
Query: 867 LGIAGVSHHSLLFS 880
LGIAG+S H L+++
Sbjct: 716 LGIAGISDHDLIYT 729
>gi|281338942|gb|EFB14526.1| hypothetical protein PANDA_015067 [Ailuropoda melanoleuca]
Length = 1218
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/624 (42%), Positives = 383/624 (61%), Gaps = 49/624 (7%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 64 SGLLLYRELHNQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAT 123
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L+S WIKE +++ + G R L + Q GV++TTY
Sbjct: 124 LVSHVLLIMPTNLISTWIKEFVKWTPGMRVKAFHGPSKDERTRNLSRIQQRNGVIITTYQ 183
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + SL G F+ WDY+ILDE H IK ST+ A +P+ +RI
Sbjct: 184 MLINNWQQLSSLNGQEFV----------WDYVILDEAHKIKTSSTKSAICARAVPARNRI 233
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 234 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 293
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K EV + D + +LS+KN++I+W+RL
Sbjct: 294 SENLMAIIKPYFLRRTKEEVQKKKASTPEVRLGEKNPDVDAICEMPSLSRKNDLIIWIRL 353
Query: 571 TSCQRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
Q ++Y F++ + + L SPLA L +LKK+CDHP LL+ RA +L
Sbjct: 354 VPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACH--------LL 405
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLIFS 684
N + + A D ++ D + D+ S K+ F++ LL +L EGH L+FS
Sbjct: 406 NLGSVKFSVQGANEGEDASDVDHIDQITDDTLMEESGKMIFLIELLKRLRDEGHQTLVFS 465
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
Q+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT+QVGG+GL
Sbjct: 466 QSRQILNIIEHLLKNRHFKILRIDGTVTHLVEREKRINLFQQNKDYSVFLLTTQVGGVGL 525
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
TLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK
Sbjct: 526 TLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDS 585
Query: 804 LFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQ 862
L + T + K RYF++Q+LREL ++ + F S TQ QL H Q D++L+ HI
Sbjct: 586 LIRQTTGDKKNPFRYFTKQELRELFTI--EDFQNSATQLQLQSLHAAQRRSDKTLDEHIA 643
Query: 863 FLDTLGIAGVSHHSLLFSKTARVQ 886
+L +LGIAG+S H L++++ V+
Sbjct: 644 YLHSLGIAGISDHDLMYTRDLSVK 667
>gi|410988871|ref|XP_004000700.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Felis catus]
Length = 1241
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/623 (42%), Positives = 379/623 (60%), Gaps = 48/623 (7%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYQELHNQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAT 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L+S WIKE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLISTWIKEFVKWTPGMRVKTFHGPSKNERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + SL G F+ WDY+ILDE H IK+ ST+ A IP+ +RI
Sbjct: 204 MLINNWQQLSSLNGQEFV----------WDYVILDEAHKIKSSSTKSAICARAIPTRNRI 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATQGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEV----------------FHEDDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K EV D + +LS+KN+ I+W+RL
Sbjct: 314 SENLMTIIKPYFLRRTKEEVQKKKSSNPEVRLREKNLDVDAICEMPSLSRKNDFIIWIRL 373
Query: 571 TSCQRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
Q ++Y F++ + + L SPLA L +LKK+CDHP LL+ RA +L
Sbjct: 374 APLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARAC--------LLL 425
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLIFS 684
N + D ++ D + D+ S K+ F++ LL++L EGH L+FS
Sbjct: 426 NLGSVKFSVPGENEGEDSSDVDQIDQITDDTLMAESGKMLFLIELLERLRDEGHQTLVFS 485
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
Q+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT+Q+GG+GL
Sbjct: 486 QSRQILNIIECLLKNRHFKILRIDGTITHLVEREKRINLFQQNKDYSVFLLTTQIGGVGL 545
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
TLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK
Sbjct: 546 TLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDS 605
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQF 863
L + T K RYF++Q+LREL ++ + F S TQ QL H Q D+ L+ HI +
Sbjct: 606 LIRQTTGDKNPFRYFTKQELRELFTI--EDFQNSATQLQLQSLHAAQRRSDKKLDEHIAY 663
Query: 864 LDTLGIAGVSHHSLLFSKTARVQ 886
L +LGIAG+S H L++++ V+
Sbjct: 664 LHSLGIAGISDHDLMYTRDLSVK 686
>gi|291235335|ref|XP_002737602.1| PREDICTED: DNA excision repair protein ERCC-6-like [Saccoglossus
kowalevskii]
Length = 2298
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/612 (43%), Positives = 378/612 (61%), Gaps = 51/612 (8%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTL 363
L+P+QRE + W W LH + GGILGDDMGLGKT+Q+ FL+GLF + +K L+V P TL
Sbjct: 99 LYPYQRESILWFWGLHKKKSGGILGDDMGLGKTIQVIAFLSGLFDAERVKSILIVLPATL 158
Query: 364 LSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSS 423
+ +W +E ++ Y G+ + R+ L V + G LL+TY I+ NN + +
Sbjct: 159 IINWEREFDKWAPGIRVLTYHGSNKRERERALSKVQRRGGALLSTYGIISNNWQEV---- 214
Query: 424 FISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWA 483
+++ D +WDY+ILDEGH IKN S + +K++ IP+ RII++GTPIQNNLKELWA
Sbjct: 215 -ATNDRDGRDFVWDYVILDEGHKIKNKSNKSSKAVHAIPAKRRIILTGTPIQNNLKELWA 273
Query: 484 LFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRL 542
LF+F +LLG K F +YE PI+R K A E R+G+ +A+ LR+ I+PYF RR
Sbjct: 274 LFDFVTQGQLLGTLKTFCLEYEGPIVRARQKDARPSEMRLGTEMAENLRQIIEPYFKRRT 333
Query: 543 KNEVFHE-------DDV--------------TSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
K E + DD T + +L++KN++I+W+ L+ Q+++Y+ F
Sbjct: 334 KAETLEKNKENQTKDDTREEMDGNTTASSTSTPTPSLTRKNDLILWVFLSKVQQKIYQDF 393
Query: 582 LNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLN--PEDAALAE 637
+ + V L SPLA LT+LKKICDHP LL KRA MLN E+
Sbjct: 394 VETPEVRQLLMTTRSPLAMLTMLKKICDHPRLLNKRAC--------GMLNLEGEECDPYG 445
Query: 638 KLAMHIADVAEKDDFQEQHDNISC--------KISFILSLLDKLIPEGHNVLIFSQTRKM 689
+ + ++ + + DN+S K+ ++SLL+ L EGH L+FSQ++KM
Sbjct: 446 DYSDTASQISSSECAADNIDNVSISALVEESGKLVVLISLLENLRDEGHRTLVFSQSKKM 505
Query: 690 LNLIQESIGSKGYKFLRIDGTT-KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKA 748
L+++Q+ + K +K +RIDG+ K DR K++N FQ +FLLT+ VGG+GLTLT A
Sbjct: 506 LDIMQKVLEEKNFKLIRIDGSIRKLEDREKLINKFQRNSSYSVFLLTTGVGGIGLTLTAA 565
Query: 749 DRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA 808
DRV++ DP+WNP+TD+Q+VDRAYR+GQKK VV+YRL+TCG+VEEKIYR+QIFK + K A
Sbjct: 566 DRVVIFDPSWNPATDSQAVDRAYRLGQKKTVVIYRLITCGSVEEKIYRRQIFKDSITKQA 625
Query: 809 T-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTL 867
T K+ RYF++ D++EL L VS TQ QL + H + D SL+ HI +L +L
Sbjct: 626 TGSSKDPYRYFTRLDMKELFKLDDPT--VSTTQIQLEQLHSAKRKTDTSLDMHIAYLYSL 683
Query: 868 GIAGVSHHSLLF 879
I G+S H L+F
Sbjct: 684 AIFGISDHDLMF 695
>gi|296235754|ref|XP_002763033.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial
[Callithrix jacchus]
Length = 1229
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 260/619 (42%), Positives = 379/619 (61%), Gaps = 52/619 (8%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 60 SGLLLYRELHDQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 119
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L ++ Q GV++TTY
Sbjct: 120 LVNHVLLIMPTNLMNTWLKEFVKWTPGMRVKTFHGPSKDERTRNLNWIQQRNGVIITTYQ 179
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A +P+++R+
Sbjct: 180 MLINNWQQLSSFRGQEFL----------WDYVILDEAHKIKTSSTKSAICARAVPASNRL 229
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K F+ +YE PI R +K A EK +G +
Sbjct: 230 LLTGTPIQNNLRELWSLFDFACQGSLLGTLKTFRMEYENPITRAREKDATPGEKALGFKI 289
Query: 527 AKELRERIQPYFLRRLKNEVFHE---------------DDVTSSATLSKKNEMIVWLRLT 571
++ L I+PYFLRR K EV + D + +LS+KN++I+W+RL
Sbjct: 290 SENLMAIIKPYFLRRTKEEVQKKTSNPDVKLNEKNPDVDAICEMPSLSRKNDLIIWIRLV 349
Query: 572 SCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSM 627
Q ++Y F++ E+++ SPLA L ILKK+CDHP LL+ RA +
Sbjct: 350 PLQEEIYRKFVSLDHIKELLMET--RSPLAELGILKKLCDHPRLLSARAC--------GL 399
Query: 628 LNPEDAALAEKLAMHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLIF 683
LN + + D + D + D+ S K+ F++ LL +L EGH L+F
Sbjct: 400 LNLGTVTFSAQDGNEGEDSPDMDHIDQITDDTLMEESGKMIFLMGLLKRLRDEGHQTLVF 459
Query: 684 SQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
SQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT+QVGG+G
Sbjct: 460 SQSRQILNIIERLLKNRHFKILRIDGTITHLLEREKRINLFQQNKDYSVFLLTTQVGGVG 519
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
LTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK
Sbjct: 520 LTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKD 579
Query: 803 GLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHI 861
L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D L+ HI
Sbjct: 580 SLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSDTKLDEHI 637
Query: 862 QFLDTLGIAGVSHHSLLFS 880
+L +LGIAG+S H L+++
Sbjct: 638 AYLQSLGIAGISDHDLMYT 656
>gi|224098212|ref|XP_002194690.1| PREDICTED: DNA excision repair protein ERCC-6-like [Taeniopygia
guttata]
Length = 1170
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/631 (40%), Positives = 385/631 (61%), Gaps = 47/631 (7%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGK-GGILGDDMGLGKTMQICGFLAGLFHSR 350
S ++ G++ LF HQREG+ +L+ LH + K GGIL DDMGLGKT+Q+ FL+G+F +
Sbjct: 91 SGLLIYGEMHRKLFQHQREGVAFLYRLHRERKPGGILADDMGLGKTIQVIAFLSGMFDAE 150
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
LI+ L++ P TL+S W+ E +++E+ GT R L+ V + G+++T+Y
Sbjct: 151 LIQHVLLIMPTTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNLERVQRKNGIVITSYQ 210
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ NN K L + + +WDY+ILDE H IK PS + K + IP+ +RI+++
Sbjct: 211 MLINNWKQLASRH-------EQEFVWDYIILDEAHKIKCPSNKTTKCVYAIPAHYRILLT 263
Query: 471 GTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
GTP+QNNL+E+W+LF+F C LLG K FK +YE PI R +K A EK +G +++
Sbjct: 264 GTPVQNNLREMWSLFDFACQGSLLGTAKTFKMEYENPITRAREKDATPGEKALGLKISEN 323
Query: 530 LRERIQPYFLRRLKNEV--FHEDDVTSS-------------ATLSKKNEMIVWLRLTSCQ 574
L I+PYFLRR K ++ +H D S +L++KN+ +VW+ L Q
Sbjct: 324 LMSIIKPYFLRRTKEDIKKYHADKADSPLSEDPSENKAPVMPSLTRKNDFVVWVYLAPVQ 383
Query: 575 RQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
++Y FL + V + + SPLA LTILKK+CDHP LL+ RA + G++ + E
Sbjct: 384 EEIYRNFLCLDHVKEVLMMNRSPLAELTILKKLCDHPRLLSTRACTQL--GLEEEEDSEQ 441
Query: 633 AALAEKLAM-------HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQ 685
E + H++D ++ S K+ F++ LL++L EGH L+FSQ
Sbjct: 442 DYRMEAIMFSGKNKIDHLSDETVIEE--------SGKMQFLVGLLERLREEGHRTLVFSQ 493
Query: 686 TRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
+RKML++I+ + + ++ LRIDGT T ++R + +N FQ +FLLT+QVGG+G+T
Sbjct: 494 SRKMLDIIELVLSRRQFQILRIDGTVTHLTERERRINAFQTNTTYSVFLLTTQVGGVGIT 553
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
LT A RV++ DP+WNP+TD Q+VDRAYRIGQK++VV+YRL+TCGTVEEKIYR+Q+FK L
Sbjct: 554 LTAASRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSL 613
Query: 805 FKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQF 863
+ T + K RYFS+Q+LREL L + S TQ QL H Q D L+ H+ +
Sbjct: 614 IRQTTGDKKNPFRYFSKQELRELFIL--EDTRTSATQIQLQSLHAMQRKSDLQLDEHLAY 671
Query: 864 LDTLGIAGVSHHSLLFSKTARVQVVQEEEEA 894
L +L + G+S H L++++ + E EEA
Sbjct: 672 LHSLAMFGISDHDLIYTREMAHEEQVESEEA 702
>gi|354493473|ref|XP_003508866.1| PREDICTED: DNA excision repair protein ERCC-6 [Cricetulus griseus]
gi|344257931|gb|EGW14035.1| DNA excision repair protein ERCC-6-like [Cricetulus griseus]
Length = 1249
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/653 (41%), Positives = 394/653 (60%), Gaps = 52/653 (7%)
Query: 304 LFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKT 362
LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F + L+ R L++ P +
Sbjct: 100 LFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLSGMFDASLVNRVLLIMPTS 159
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGS 422
L++ W+KE +++ + G+ R L + Q GV++TTY ++ NN + L +
Sbjct: 160 LINTWVKEFAKWTPGMRVKTFHGSSKDERTRNLTRIQQRNGVIITTYQMLINNWQQL--A 217
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELW 482
SF E +WDY+ILDE H IK+ ST+ A +P++HR++++GTPIQNNL+ELW
Sbjct: 218 SFNGQEF-----VWDYVILDEAHKIKSASTKSAICARAVPASHRLLLTGTPIQNNLQELW 272
Query: 483 ALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRR 541
+LF+F C LLG K FK +YE PI+R +K A EK +G +++ L E I+PYFLRR
Sbjct: 273 SLFDFACQGSLLGTLKTFKMEYENPIIRAREKDATPGEKALGLKISENLMEIIKPYFLRR 332
Query: 542 LKNEV----------------FHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN-- 583
K EV + + +L++KN+ IVW+RL Q ++Y F++
Sbjct: 333 TKEEVQTKKADNPEAGLSEKNLGVEAICEMPSLTRKNDFIVWIRLVPLQEEIYRKFVSLD 392
Query: 584 --SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAM 641
E+++ SPLA L +LKK+CDHP LL+ R +LN A + +
Sbjct: 393 HIKELLMET--RSPLAELGVLKKLCDHPRLLSARVCH--------LLNLGTATFSVQDEN 442
Query: 642 HIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESI 697
+ D DN S K+ F+++LL++L EGH L+FSQ+R++LN+I+ +
Sbjct: 443 EQEVAPDVDSIHHLTDNALMQESGKMIFLVALLERLQDEGHQTLVFSQSRQILNIIERLL 502
Query: 698 GSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDP 756
++ +K LRIDGT T +R K + FQ+ +FLLT+QVGG+GLTLT A RV++ DP
Sbjct: 503 RNRHFKTLRIDGTITHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTAATRVVIFDP 562
Query: 757 AWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT-EHKEQI 815
+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK L + T E K
Sbjct: 563 SWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPF 622
Query: 816 RYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHH 875
RYFS+Q+LREL ++ S TQ QL H Q DE L+ HI +L +L IAG+S H
Sbjct: 623 RYFSKQELRELFTV--GDLQNSATQMQLQSLHAAQRRSDEKLDEHIAYLHSLDIAGISDH 680
Query: 876 SLLFSKTARVQ----VVQEEEEATRRKGTA-FVGNSSSSYLVARNVDGAEYAF 923
L+F++ V+ +V++ +R A ++ S S + R G E A+
Sbjct: 681 DLMFTRDLSVKEELAMVEDSPYIQQRVQKAQYLVESESQNTMERQRTGTEEAW 733
>gi|338729291|ref|XP_001488364.3| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Equus
caballus]
Length = 1286
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/660 (41%), Positives = 398/660 (60%), Gaps = 47/660 (7%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF +Q+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 126 SGLLLYRELHNQLFEYQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 185
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ WIKE +++ + G R L + Q GV++TTY
Sbjct: 186 LVNHVLLIMPTNLINMWIKEFAKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 245
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ NN + L SS S + +WDY+ILDE H IK ST+ A IP+++RI+++
Sbjct: 246 MLINNWQQL--SSLNSQQF-----VWDYVILDEAHKIKTSSTKSAICARAIPASNRILLT 298
Query: 471 GTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
GTPIQNNL+ELW+LF+F C LLG K F+ +YE PI R +K A EK +G +++
Sbjct: 299 GTPIQNNLQELWSLFDFACQGSLLGTLKTFRMEYENPITRAREKDATPGEKALGFKISEN 358
Query: 530 LRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRLTSC 573
L I+PYFLRR K EV + D + +LS+KN++I+W+RL
Sbjct: 359 LMAIIKPYFLRRTKEEVQKKKSSNPEVRLDEKNPDADAICEMPSLSRKNDLIIWIRLVPL 418
Query: 574 QRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDV-LDGMDSML 628
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA + L + +
Sbjct: 419 QEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACHLLNLGAVKFSV 476
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRK 688
E+ H+ + + +E S K+ F++ LL +L EGH L+FSQ+R+
Sbjct: 477 QDENEGEDSSDVDHLDKITDDTLMEE-----SGKMIFLMDLLQRLRDEGHQTLVFSQSRQ 531
Query: 689 MLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
+LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT+QVGG+GLTLT
Sbjct: 532 ILNIIERLLKNRHFKILRIDGTITHLVEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTA 591
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK L +
Sbjct: 592 ATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQ 651
Query: 808 AT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDT 866
T + K RYFS+Q+LREL ++ + F S TQ QL H Q D+ L+ HI +L +
Sbjct: 652 TTGDKKNPFRYFSKQELRELFTI--EDFQNSATQLQLQSLHAAQRRSDKKLDEHIAYLHS 709
Query: 867 LGIAGVSHHSLLFSK----TARVQVVQEEEEATRR--KGTAFVGNSSSSYLVARNVDGAE 920
LGIAG+S H L++++ + V++E +R K VG S + + R G E
Sbjct: 710 LGIAGISDHDLMYTRDLSDKEELDVIEESHYIQQRVQKAQFLVGLESQNTEMERERAGIE 769
>gi|326924270|ref|XP_003208353.1| PREDICTED: DNA excision repair protein ERCC-6-like [Meleagris
gallopavo]
Length = 1273
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/627 (42%), Positives = 390/627 (62%), Gaps = 39/627 (6%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGK-GGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L G++ LF HQREG+ +L+ L+ +G+ GGIL DDMGLGKT+QI FL+G+F S
Sbjct: 70 SGLLLYGEMHEKLFQHQREGVAFLYRLYREGRPGGILADDMGLGKTIQIIAFLSGMFDSE 129
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
LI+ L++ P TL+S W+ E +++E+ GT R L+ + + G+++T+Y
Sbjct: 130 LIRHVLLIVPTTLISSWLAEFARWTPGLRVKEFHGTSKIERTRNLEKIQRKNGIVITSYQ 189
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ NN K L D IWDY+ILDE H IK PS + K + IP+ HR++++
Sbjct: 190 MLINNWKQLAS-------CHGQDFIWDYIILDEAHKIKCPSNKTTKCVYAIPAKHRLLLT 242
Query: 471 GTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
GTP+QNNL+E+W+LF+F C LLG K F+ +YE PI R +K A EK +G +++
Sbjct: 243 GTPLQNNLQEMWSLFDFACQGSLLGTAKTFRMEYENPITRAREKDATVGEKALGLKISEN 302
Query: 530 LRERIQPYFLRRLKNEV---------------FHEDDVTSSATLSKKNEMIVWLRLTSCQ 574
L I+PYFLRR K+++ HE +L++KN+ +VW+ L Q
Sbjct: 303 LMTIIKPYFLRRTKDDIKKNHTEKSDTPLPEDPHEPSAPVMPSLTRKNDFVVWVYLAPVQ 362
Query: 575 RQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDV-LDGMDSMLNPE 631
++Y FL + V L SPLA LT+LKK+CDHP LL+ RA + LDG + L +
Sbjct: 363 EKIYRNFLCLDHVKELLTTTRSPLAELTVLKKLCDHPRLLSARACTQLDLDGQE-YLEQD 421
Query: 632 DAALAEKL--AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKM 689
+ A L A I ++++ QE S K+ F+L LL++L EGH L+FSQ+RKM
Sbjct: 422 HGSEAAVLSGANKIDHLSDESLIQE-----SGKMLFLLGLLERLREEGHRTLVFSQSRKM 476
Query: 690 LNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKA 748
L++I+ + S+ +K +RIDGT T ++R K +N FQ +FLLT+QVGG+G+TLT A
Sbjct: 477 LDIIERVLSSRRFKIMRIDGTVTHLTEREKRINAFQSNKDYSVFLLTTQVGGVGITLTAA 536
Query: 749 DRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA 808
+RV++ DP+WNP+TD Q+VDRAYRIGQK++VV+YRL+TCGTVEEKIYR+Q+FK L +
Sbjct: 537 NRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIRQT 596
Query: 809 T-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTL 867
T + K RYFS+Q+LREL +L + S TQ QL H Q D L+ HI +L +L
Sbjct: 597 TGDKKNPFRYFSKQELRELFTL--EDTRTSTTQIQLQSLHATQRQTDVQLDEHIAYLHSL 654
Query: 868 GIAGVSHHSLLFSKTARVQVVQEEEEA 894
+ G+S H L+F++ + E EEA
Sbjct: 655 EMFGISDHDLIFTREVTHEEQAESEEA 681
>gi|431914423|gb|ELK15680.1| DNA excision repair protein ERCC-6-like protein [Pteropus alecto]
Length = 1265
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/623 (42%), Positives = 384/623 (61%), Gaps = 57/623 (9%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 113 SGLLLYRELHDQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 172
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P +L+S W+KE +++ + G R L+ + GV++TTY
Sbjct: 173 LVNHVLLIMPTSLISTWVKEFDKWTPGMRVKTFHGPSKDERTRNLRRIQHRNGVIITTYQ 232
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + SL G F+ WDY+ILDE H IK ST+ A +P+++RI
Sbjct: 233 MLINNWQQLSSLDGQEFV----------WDYVILDEAHKIKTSSTKSALCARAVPASNRI 282
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 283 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGLKI 342
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K EV + D +LS+KN++I+W+RL
Sbjct: 343 SENLMAIIKPYFLRRTKEEVQKKQPGDPEVRLSEKNPGVDATNEMPSLSRKNDLIIWIRL 402
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
Q ++Y F++ E+++ SPLA L ILKK+CDHP LL+ RA
Sbjct: 403 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGILKKLCDHPRLLSARACH-------- 452
Query: 627 MLNPEDAALA------EKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
+LN ED +K A + +++ D + S K+ F++ LL++L EGH
Sbjct: 453 LLNLEDVTFPVEDEGEDKEASDVDHISQVTDVTLMKE--SGKMIFLMDLLERLRDEGHQT 510
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FL+T+QVG
Sbjct: 511 LVFSQSRQILNIIERLLKNRHFKILRIDGTITHLVEREKRINLFQQNKDYSVFLITTQVG 570
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G+GLTLT A RV++ DP+WNP+TD Q+VDRA+RIGQ+++VVVYRL+TCGTVEEKIYR+Q+
Sbjct: 571 GVGLTLTAATRVVIFDPSWNPATDAQAVDRAHRIGQRENVVVYRLITCGTVEEKIYRRQV 630
Query: 800 FKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLE 858
FK L + T + K RYFS+Q+LREL ++ + F S TQ QL H Q D L+
Sbjct: 631 FKDSLIRQTTGDKKNPFRYFSKQELRELFAI--EDFQKSATQLQLQSLHAAQRRSDRRLD 688
Query: 859 AHIQFLDTLGIAGVSHHSLLFSK 881
HI +L TLGIAGVS H L++++
Sbjct: 689 EHIAYLHTLGIAGVSDHDLMYTQ 711
>gi|332861007|ref|XP_003317563.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Pan troglodytes]
Length = 1250
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/626 (42%), Positives = 382/626 (61%), Gaps = 67/626 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R+
Sbjct: 204 MLINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRL 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEDVQKKKSSNPEDRLNEKNPDVDAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRA---------- 616
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACCLLNLGTFS 431
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A+D +G DS P+ HI V + +E S K+ F++ LL +L E
Sbjct: 432 AQDGNEGEDS---PD--------VDHIDQVTDDTLMEE-----SGKMIFLMDLLKRLRDE 475
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLT 735
GH L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT
Sbjct: 476 GHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLT 535
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIY
Sbjct: 536 TQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 595
Query: 796 RKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMD 854
R+Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 596 RRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSD 653
Query: 855 ESLEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 654 IKLDEHIAYLQSLGIAGISDHDLMYT 679
>gi|410257904|gb|JAA16919.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Pan troglodytes]
gi|410349947|gb|JAA41577.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Pan troglodytes]
Length = 1250
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/626 (42%), Positives = 382/626 (61%), Gaps = 67/626 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R+
Sbjct: 204 MLINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRL 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEDVQKKKSSNPEDRLNEKNPDVDAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRA---------- 616
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACCLLNLGTFS 431
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A+D +G DS P+ HI V + +E S K+ F++ LL +L E
Sbjct: 432 AQDGNEGEDS---PD--------VDHIDQVTDDTLMEE-----SGKMIFLMDLLKRLRDE 475
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLT 735
GH L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT
Sbjct: 476 GHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLT 535
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIY
Sbjct: 536 TQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 595
Query: 796 RKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMD 854
R+Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 596 RRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSD 653
Query: 855 ESLEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 654 IKLDEHIAYLQSLGIAGISDHDLMYT 679
>gi|58331268|ref|NP_060139.2| DNA excision repair protein ERCC-6-like [Homo sapiens]
gi|121948339|sp|Q2NKX8.1|ERC6L_HUMAN RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like; AltName:
Full=PLK1-interacting checkpoint helicase; AltName:
Full=Tumor antigen BJ-HCC-15
gi|84798788|gb|AAI11487.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Homo sapiens]
gi|155675838|gb|ABU25227.1| Plk1-interacting checkpoint helicase [Homo sapiens]
Length = 1250
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/626 (42%), Positives = 382/626 (61%), Gaps = 67/626 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R+
Sbjct: 204 MLINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRL 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRA---------- 616
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACCLLNLGTFS 431
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A+D +G DS P+ HI V + +E S K+ F++ LL +L E
Sbjct: 432 AQDGNEGEDS---PD--------VDHIDQVTDDTLMEE-----SGKMIFLMDLLKRLRDE 475
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLT 735
GH L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT
Sbjct: 476 GHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLT 535
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIY
Sbjct: 536 TQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 595
Query: 796 RKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMD 854
R+Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 596 RRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSD 653
Query: 855 ESLEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 654 IKLDEHIAYLQSLGIAGISDHDLMYT 679
>gi|301614708|ref|XP_002936822.1| PREDICTED: DNA excision repair protein ERCC-6-like [Xenopus
(Silurana) tropicalis]
Length = 1361
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/601 (44%), Positives = 383/601 (63%), Gaps = 45/601 (7%)
Query: 302 NMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAP 360
N LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+Q+ GFL+G+F S LIK L+V P
Sbjct: 105 NKLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTIQVIGFLSGMFDSELIKYVLLVMP 164
Query: 361 KTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL- 419
TL+S+W+KE ++ E+ GT K R L+ + + G+++TTY ++ NN + L
Sbjct: 165 TTLISNWVKEFQKWTPGLRVAEFHGTSKKERTRNLEKIQRMSGIIITTYQMLINNWQQLA 224
Query: 420 --RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
G F WDY+ILDE H IK ST+ AKS IP+ +RI+++GTPIQNN
Sbjct: 225 TYNGREFE----------WDYIILDEAHKIKTSSTKTAKSCHSIPAKNRILLTGTPIQNN 274
Query: 478 LKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQP 536
L+E+WAL++F C LLG +K FK +YE PI R +K A EK +G +++ L + IQP
Sbjct: 275 LREMWALYDFACQGTLLGTSKTFKMEYENPITRAREKDATPGEKALGLKISENLMKIIQP 334
Query: 537 YFLRRLKNEVFHEDDVTSSA----------TLSKKNEMIVWLRLTSCQRQLYEAFLN--- 583
YFLRR K++V ++ + A +L++KN+ IVW+ L++ Q +Y F++
Sbjct: 335 YFLRRTKSDVQNKKTERTRAQDTSQGPSMPSLTRKNDFIVWVYLSTIQEDVYRKFISLDQ 394
Query: 584 -SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDV-LDGMDSMLNPE-DAALAEKLA 640
E++++ SPLA L ILKK+CDHP LL+ RA + L+G D N E D L K
Sbjct: 395 IKELLMTT--RSPLAELNILKKLCDHPRLLSARACIQLGLEGDDYHSNEEGDHELVTKFD 452
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK 700
H++D ++ S K+ ++ LL KL EGH L+FSQ+RKML++I + +K
Sbjct: 453 -HLSDEILIEE--------SGKLLLLIDLLHKLKEEGHRTLVFSQSRKMLDMIDRILQNK 503
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
+K +RIDGT +R K ++ FQ + + LLT+QVGG+GLTLT ADRV++ DP+WNP
Sbjct: 504 NFKVMRIDGTVALPEREKRISIFQSNNNYSVLLLTTQVGGVGLTLTAADRVVIFDPSWNP 563
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT-EHKEQIRYFS 819
+TD Q+VDRAYRIGQ+++VV+YRL+TCGTVEEKIYR+QIFK L + T + K RYFS
Sbjct: 564 ATDAQAVDRAYRIGQQENVVIYRLITCGTVEEKIYRRQIFKESLIRQTTGDKKNPFRYFS 623
Query: 820 QQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLF 879
+Q+L+EL SL + S TQ QL H + D L+ HI +L TL I G+S H L++
Sbjct: 624 KQELKELFSL--EDTRTSSTQIQLQNMHAAERKTDTRLDEHIAYLHTLQIFGISDHDLVY 681
Query: 880 S 880
+
Sbjct: 682 A 682
>gi|397467179|ref|XP_003805304.1| PREDICTED: DNA excision repair protein ERCC-6-like [Pan paniscus]
Length = 1250
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/626 (42%), Positives = 382/626 (61%), Gaps = 67/626 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R+
Sbjct: 204 MLINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRL 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEDVQKKKSSNPEDRLNEKNPDVDAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRA---------- 616
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACCLLNLGTFS 431
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A+D +G DS P+ HI V + +E S K+ F++ LL +L E
Sbjct: 432 AQDGNEGEDS---PD--------VDHIDQVTDDTLMEE-----SGKMIFLMDLLKRLRDE 475
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLT 735
GH L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT
Sbjct: 476 GHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLT 535
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIY
Sbjct: 536 TQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 595
Query: 796 RKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMD 854
R+Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 596 RRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSD 653
Query: 855 ESLEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 654 IKLDEHIAYLQSLGIAGISDHDLMYT 679
>gi|297710314|ref|XP_002831842.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Pongo abelii]
Length = 1250
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 265/626 (42%), Positives = 382/626 (61%), Gaps = 67/626 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHDQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R+
Sbjct: 204 MLINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRL 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRA---------- 616
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACGLLNLGTFS 431
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A+D +G DS P+ HI V + +E S K+ F++ LL +L E
Sbjct: 432 AQDGNEGEDS---PD--------VDHIDQVTDDTLMEE-----SGKMIFLMDLLKRLRDE 475
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLT 735
GH L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT
Sbjct: 476 GHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLT 535
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIY
Sbjct: 536 TQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 595
Query: 796 RKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMD 854
R+Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 596 RRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSD 653
Query: 855 ESLEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 654 TKLDEHIAYLQSLGIAGISDHDLMYT 679
>gi|426257224|ref|XP_004022232.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ovis aries]
Length = 1242
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 283/730 (38%), Positives = 427/730 (58%), Gaps = 74/730 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N L+ +Q+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYQELHNQLYEYQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P +L+S W++E +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTSLISIWLREFVKWTPGMRVKTFHGPSKDERTRNLCRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + SL G F+ WDY+ILDE H IK ST+ A IP+++RI
Sbjct: 204 MLINNWQQLSSLNGQEFL----------WDYVILDEAHKIKTSSTKSAICARAIPASNRI 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG + FK +YE PI R +K A +EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPQEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHEDDVTSSA----------------TLSKKNEMIVWLRL 570
++ L I+PYFLRR K EV + A +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEEVQKKKSSNPEAQLSEKSPDVGAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARAC--------G 423
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLI 682
+LN A + + + D ++ D + D+ S K+ F++ LL KL EGH L+
Sbjct: 424 LLNLGAAKFSVQDEIEGEDSSDVDHIDQISDDTLMEESGKMVFLMDLLKKLRDEGHQTLV 483
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
FSQ+R++LN+I+ + ++ +K LRIDGT T +R K ++ FQ+ +FLLT+QVGG+
Sbjct: 484 FSQSRRILNIIERLLKNRHFKILRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGV 543
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK
Sbjct: 544 GLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFK 603
Query: 802 GGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAH 860
L + T + K RYFS+Q+LREL ++ + F S TQ QL H Q D++L+ H
Sbjct: 604 DSLIRQTTGDKKNPFRYFSKQELRELFTI--EDFQNSATQLQLQSLHAAQRRSDKNLDEH 661
Query: 861 IQFLDTLGIAGVSHHSLLFSKTARVQ----VVQEEEEATRR--KGTAFVGNSS--SSYLV 912
I FL +L IAG+S H L++++ V+ V+++ +R K V S + L+
Sbjct: 662 IAFLHSLRIAGISDHDLMYTRDLSVKEELDVIKDSHYIQQRVQKAQFLVECESQNTELLM 721
Query: 913 ARNVDGAE--------YAFNPRDIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISNKVT 964
R G E Y + ++NK P + + + +E +S L+++ V
Sbjct: 722 ERQKTGNEGIWLREPVYQTKKKHPEVNKPQPQPSSRLPIYHTQEEE----ISSLMAS-VI 776
Query: 965 VERLPDKGTK 974
++ LP +G K
Sbjct: 777 IDDLPKEGEK 786
>gi|335306182|ref|XP_003360412.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sus scrofa]
Length = 1247
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/625 (42%), Positives = 390/625 (62%), Gaps = 51/625 (8%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGK-GGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF +Q+EG+ +L+SL+ G+ GGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHNQLFEYQKEGVAFLYSLYRDGRRGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P +L+S W++E +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTSLISTWLREFVKWTPGMRVKTFHGPSKDERTRNLSRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + SL G F+ WDY+ILDE H IK ST+ A IP+ +RI
Sbjct: 204 MLINNWQQLSSLNGREFV----------WDYVILDEAHKIKTSSTKSAICARAIPARNRI 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEV-----------FHEDDVTSSA-----TLSKKNEMIVWLRL 570
++ L I+PYFLRR K EV E+D + A +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEEVQKKKSSNPEVRLSEEDPDADAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAE-----DVLDG 623
Q ++Y F++ + + L SPLA L +LKK+CDHP LL+ RA + V
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACQLLNLGAVRFS 433
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIF 683
+ + ED++ + HI V+++ +E S K++F++ LL +L EGH L+F
Sbjct: 434 VQDEIEGEDSSGVD----HIDQVSDETLMEE-----SGKMTFLMDLLKRLRDEGHQTLVF 484
Query: 684 SQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
SQ+R++LN+++ + ++ +K LRIDGT T +R K ++ FQ+ +FLLT+QVGG+G
Sbjct: 485 SQSRQILNILERLLKNRHFKILRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGVG 544
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
LTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK
Sbjct: 545 LTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKD 604
Query: 803 GLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHI 861
L + T + K RYFS+Q+LREL ++ + F S TQ QL H Q D++L+ HI
Sbjct: 605 SLIRQTTGDKKNPFRYFSKQELRELFTI--EDFQNSATQLQLQSLHASQRRSDKNLDEHI 662
Query: 862 QFLDTLGIAGVSHHSLLFSKTARVQ 886
+L +L IAG+S H L++++ V+
Sbjct: 663 AYLHSLRIAGISDHDLMYTRDLSVK 687
>gi|148886758|ref|NP_001092144.1| DNA excision repair protein ERCC-6-like [Rattus norvegicus]
gi|149042163|gb|EDL95870.1| similar to SNF2/RAD54 family protein (predicted) [Rattus
norvegicus]
Length = 1230
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/609 (42%), Positives = 381/609 (62%), Gaps = 55/609 (9%)
Query: 304 LFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKT 362
LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F + L+ L++ P
Sbjct: 96 LFEHQKEGIAFLYSLYKNGRKGGILADDMGLGKTVQIIAFLSGMFDASLVNHVLLIMPTN 155
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSK---SL 419
L++ W+KE +++ + G+ R L + Q GV++TTY ++ NN + S
Sbjct: 156 LINTWVKEFAKWTPGMRVKTFHGSSKNERIRNLTRIQQRNGVVITTYQMLLNNWQQLASF 215
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
G +F+ WDY+ILDE H IK+ ST+ A +P+++R++++GTPIQNNL+
Sbjct: 216 NGQAFV----------WDYVILDEAHKIKSASTKSAVCARAVPASNRLLLTGTPIQNNLQ 265
Query: 480 ELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
ELW+LF+F C LLG K FK +YE PI+R +K A EK +G +++ L E I+PYF
Sbjct: 266 ELWSLFDFACQGSLLGTLKTFKMEYENPIIRAREKDATPGEKALGFKMSENLMEIIKPYF 325
Query: 539 LRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL 582
LRR K EV + +D+ +L++KN++IVW+RL Q ++Y F+
Sbjct: 326 LRRTKEEVHMKKADKPEVRPGEKNSGVEDICEMLSLTRKNDLIVWIRLVPLQEEIYRKFV 385
Query: 583 N----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
+ E+++ SPLA L +LKK+CDHP LL+ RA +L+ + ED E
Sbjct: 386 SLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACH-LLNLGTVTFSAEDENEQED 442
Query: 639 LAM-----HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLI 693
+ H++D A QE S K+ F+++LL++L EGH L+FSQ+R++LN+I
Sbjct: 443 ASNMGSIDHLSDNAL---MQE-----SGKMIFLMALLERLQDEGHQTLVFSQSRQILNII 494
Query: 694 QESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVI 752
+ + +K +K LRIDGT T +R K + FQ+ +FLLT+QVGG+GLTLT A RV+
Sbjct: 495 ERLLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTAASRVV 554
Query: 753 VVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT-EH 811
+ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK L + T +
Sbjct: 555 IFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDK 614
Query: 812 KEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAG 871
K RYF++Q+L+EL ++ S TQ QL H Q DE L+ HI +L +LGIAG
Sbjct: 615 KNPFRYFTKQELKELFTV--GDLLNSATQMQLQCLHAAQRKSDEKLDEHIAYLHSLGIAG 672
Query: 872 VSHHSLLFS 880
+S H L+F+
Sbjct: 673 ISDHDLMFT 681
>gi|148682181|gb|EDL14128.1| mCG2900 [Mus musculus]
Length = 1217
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/653 (41%), Positives = 392/653 (60%), Gaps = 58/653 (8%)
Query: 304 LFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKT 362
LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F + L+ L++ P
Sbjct: 74 LFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLSGMFDASLVNHVLLIMPTN 133
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSK---SL 419
L++ W+ E +++ + G+ R L + Q GV++TTY ++ NN + S
Sbjct: 134 LINTWVNEFAKWTPGMRVKTFHGSSKSERTRSLTRIQQRNGVVITTYQMLLNNWQQLASF 193
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
G +F+ WDY+ILDE H IK+ ST+ A IP+++R++++GTP+QNNL+
Sbjct: 194 NGQAFV----------WDYVILDEAHKIKSASTKSAVCARAIPASNRLLLTGTPVQNNLQ 243
Query: 480 ELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
ELW+LF+F C LLG K FK +YE PI+R +K A EK +G +++ L E I+PYF
Sbjct: 244 ELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISENLMEIIKPYF 303
Query: 539 LRRLKNEV-----------FHEDDVTSSA-----TLSKKNEMIVWLRLTSCQRQLYEAFL 582
LRR K EV E + A +L++KN++IVW+RL Q ++Y F+
Sbjct: 304 LRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPLQEEIYRKFV 363
Query: 583 N----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
+ E+++ SPLA L +LKK+CDHP LL+ RA +LN A + +
Sbjct: 364 SLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACR--------LLNLGTATFSAQ 413
Query: 639 LAMHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQ 694
DV+ + D S K+ F++SLL++L EGH L+FSQ+ K+LN+I+
Sbjct: 414 DENEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIE 473
Query: 695 ESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIV 753
+ +K +K LRIDGT T +R K + FQ+ +FLLT+QVGG+GLTLT A RV++
Sbjct: 474 RLLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTAATRVVI 533
Query: 754 VDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT-EHK 812
DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK L + T E K
Sbjct: 534 FDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKK 593
Query: 813 EQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGV 872
RYF++Q+L+EL ++ S TQ QL H Q DE L+ HI +L LGIAG+
Sbjct: 594 NPFRYFTKQELKELFTV--GDLQKSATQMQLQCLHAAQRRSDEKLDEHIAYLHLLGIAGI 651
Query: 873 SHHSLLFSKTARVQ----VVQEEEEATRRKGTA-FVGNSSSSYLVARNVDGAE 920
S H L+F++ V+ ++++ + +R A F+ S S V R G E
Sbjct: 652 SDHDLMFTRDLSVKEELDMLEDSQYIHQRVQKAQFLVESESQNTVQRQTTGIE 704
>gi|426396380|ref|XP_004064422.1| PREDICTED: DNA excision repair protein ERCC-6-like [Gorilla gorilla
gorilla]
Length = 1249
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 265/626 (42%), Positives = 382/626 (61%), Gaps = 67/626 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHDQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R+
Sbjct: 204 MLINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRL 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRA---------- 616
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACCLLNLGTFS 431
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A+D +G DS P+ HI V + +E S K+ F++ LL +L E
Sbjct: 432 AQDGNEGEDS---PD--------VDHIDQVTDDTLMEE-----SGKMIFLMDLLKRLRDE 475
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLT 735
GH L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT
Sbjct: 476 GHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLT 535
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIY
Sbjct: 536 TQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 595
Query: 796 RKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMD 854
R+Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 596 RRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSD 653
Query: 855 ESLEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 654 IKLDEHIAYLQSLGIAGISDHDLMYT 679
>gi|403308077|ref|XP_003944505.1| PREDICTED: DNA excision repair protein ERCC-6-like [Saimiri
boliviensis boliviensis]
Length = 1253
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/617 (42%), Positives = 380/617 (61%), Gaps = 48/617 (7%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHDQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLINTWLKEFVKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A +P+++R+
Sbjct: 204 MLINNWQQLSSFRGQEFL----------WDYVILDEAHKIKTSSTKSAICARAVPASNRL 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLRELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATAGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHE---------------DDVTSSATLSKKNEMIVWLRLT 571
++ L I+PYFLRR K EV + D + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEEVQKKTSNPDVKLNENNPDVDAICEMPSLSRKNDLIIWIRLV 373
Query: 572 SCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSM 627
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA +L+
Sbjct: 374 PLQEEIYRKFVSLDHIKELLMET--QSPLAELGVLKKLCDHPRLLSTRAC-GLLNLRTVT 430
Query: 628 LNPEDAALAEKLA--MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQ 685
+ D E HI +++ +E S K+ F++ LL +L EGH L+FSQ
Sbjct: 431 FSARDENEGEDSPDMGHIDQISDDTLMEE-----SGKMIFLMGLLKRLRDEGHQTLVFSQ 485
Query: 686 TRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT+QVGG+GLT
Sbjct: 486 SRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLT 545
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
LT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK L
Sbjct: 546 LTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 605
Query: 805 FKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQF 863
+ T E K RYFS+Q+LREL ++ + S+TQ QL H Q D L+ HI +
Sbjct: 606 IRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSDTKLDEHIAY 663
Query: 864 LDTLGIAGVSHHSLLFS 880
L +LGIAG+S H L+++
Sbjct: 664 LQSLGIAGISDHDLMYT 680
>gi|345325793|ref|XP_001505482.2| PREDICTED: DNA excision repair protein ERCC-6 [Ornithorhynchus
anatinus]
Length = 1292
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 265/634 (41%), Positives = 384/634 (60%), Gaps = 49/634 (7%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGK-GGILGDDMGLGKTMQICGFLAGLFHSR 350
S ML ++ + LF HQREG+ +L+SL GK GGIL DDMGLGKT+QI FL+G+F +
Sbjct: 85 SGLMLYRELHHQLFEHQREGVAFLYSLFRDGKKGGILADDMGLGKTIQIIAFLSGMFDAE 144
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L+V P TL+S W +E +++ + G R L+ + + GV++TTY
Sbjct: 145 LVNYVLLVMPTTLISTWTREFAKWTPGIRVKNFHGASKTERTKNLERIQRKTGVIITTYQ 204
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + SL G F+ WDY+I DE H IK +++ A IP+ +RI
Sbjct: 205 MLINNWQQLSSLNGREFV----------WDYLIFDEAHKIKTSASKTAICARSIPAHNRI 254
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTP+QNNL+ELW+LF+ C LLG + FK +YE PI R +K A EK +G +
Sbjct: 255 LLTGTPVQNNLQELWSLFDVACQGSLLGTSTTFKMEYENPITRAREKDATPGEKALGFKI 314
Query: 527 AKELRERIQPYFLRRLKNEV---------------FHEDDVTSS-ATLSKKNEMIVWLRL 570
++ L I+P+FLRR K +V +DD+ +LS+KN+ I+W+RL
Sbjct: 315 SENLMTIIKPHFLRRTKEDVQKRTASQPKSNLSEKSQDDDLAPEMPSLSRKNDFIIWVRL 374
Query: 571 TSCQRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
TS Q +Y F++ + + L SPLA L +LKK+CDHP LL+ RA ++L
Sbjct: 375 TSLQEDIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARAC--------TLL 426
Query: 629 NPEDAALA---EKLAMHIADVAEKDDFQEQH-DNISCKISFILSLLDKLIPEGHNVLIFS 684
E + E H +D+ +Q S K+ F+++LL +L EGH L+FS
Sbjct: 427 GLEGGGFSDQDENGTDHYSDINRIGQLPDQTLMEESGKLMFLMALLKRLQREGHQTLVFS 486
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
Q+RKML++I+ + + +K LR+DGT + +R K ++ FQ+ +FLLT+QVGG+GL
Sbjct: 487 QSRKMLDIIERLLTNTHFKILRVDGTIAQLGEREKRISLFQKNKDYSVFLLTTQVGGVGL 546
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
TLT A RV++ DP+WNP+TD Q+VDRAYRIGQK++VV+YRL+TCGTVEEKIYR+Q+FK
Sbjct: 547 TLTAATRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDS 606
Query: 804 LFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQ 862
L + T + K RYFS+Q+LREL + + F +S TQQQL H Q DE L+ HI
Sbjct: 607 LVRQTTGDKKNPFRYFSKQELRELFVI--EDFRLSKTQQQLQSLHSAQRKTDEELDGHIA 664
Query: 863 FLDTLGIAGVSHHSLLFSKTARVQVVQEEEEATR 896
+L TL IAG+S H L++++ A +E E R
Sbjct: 665 YLHTLKIAGISDHDLMYTRDAAAHEEAQEMEERR 698
>gi|26324980|dbj|BAC26244.1| unnamed protein product [Mus musculus]
Length = 1240
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/653 (41%), Positives = 392/653 (60%), Gaps = 58/653 (8%)
Query: 304 LFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKT 362
LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F + L+ L++ P
Sbjct: 97 LFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLSGMFDASLVNHVLLIMPTN 156
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSK---SL 419
L++ W+ E +++ + G+ R L + Q GV++TTY ++ NN + S
Sbjct: 157 LINTWVNEFAKWTPGMRVKTFHGSSKSERTRSLTRIQQRNGVVITTYQMLLNNWQQLASF 216
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
G +F+ WDY+ILDE H IK+ ST+ A IP+++R++++GTP+QNNL+
Sbjct: 217 NGQAFV----------WDYVILDEAHKIKSASTKSAVCARAIPASNRLLLTGTPVQNNLQ 266
Query: 480 ELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
ELW+LF+F C LLG K FK +YE PI+R +K A EK +G +++ L E I+PYF
Sbjct: 267 ELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISENLMEIIKPYF 326
Query: 539 LRRLKNEV-----------FHEDDVTSSA-----TLSKKNEMIVWLRLTSCQRQLYEAFL 582
LRR K EV E + A +L++KN++IVW+RL Q ++Y F+
Sbjct: 327 LRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPLQEEIYRKFV 386
Query: 583 N----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
+ E+++ SPLA L +LKK+CDHP LL+ RA +LN A + +
Sbjct: 387 SLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACR--------LLNLGTATFSAQ 436
Query: 639 LAMHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQ 694
DV+ + D S K+ F++SLL++L EGH L+FSQ+ K+LN+I+
Sbjct: 437 DENEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIE 496
Query: 695 ESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIV 753
+ +K +K LRIDGT T +R K + FQ+ +FLLT+QVGG+GLTLT A RV++
Sbjct: 497 RLLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTAATRVVI 556
Query: 754 VDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT-EHK 812
DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK L + T E K
Sbjct: 557 FDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKK 616
Query: 813 EQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGV 872
RYF++Q+L+EL ++ S TQ QL H Q DE L+ HI +L LGIAG+
Sbjct: 617 NPFRYFTKQELKELFTV--GDLQKSATQMQLQCLHAAQRRSDEKLDEHIAYLHLLGIAGI 674
Query: 873 SHHSLLFSKTARVQ----VVQEEEEATRRKGTA-FVGNSSSSYLVARNVDGAE 920
S H L+F++ V+ ++++ + +R A F+ S S V R G E
Sbjct: 675 SDHDLMFTRDLSVKEELDMLEDSQYIHQRVQKAQFLVESESQNTVQRQTTGIE 727
>gi|27414501|ref|NP_666347.2| DNA excision repair protein ERCC-6-like [Mus musculus]
gi|81873794|sp|Q8BHK9.1|ERC6L_MOUSE RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like
gi|22902399|gb|AAH37660.1| Excision repair cross-complementing rodent repair deficiency
complementation group 6 - like [Mus musculus]
gi|27368137|gb|AAN87172.1| excision repair cross-complementing rodent repair deficiency
complementation group 6 C-like [Mus musculus]
Length = 1240
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/653 (41%), Positives = 392/653 (60%), Gaps = 58/653 (8%)
Query: 304 LFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKT 362
LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F + L+ L++ P
Sbjct: 97 LFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLSGMFDASLVNHVLLIMPTN 156
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSK---SL 419
L++ W+ E +++ + G+ R L + Q GV++TTY ++ NN + S
Sbjct: 157 LINTWVNEFAKWTPGMRVKTFHGSSKSERTRSLTRIQQRNGVVITTYQMLLNNWQQLASF 216
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
G +F+ WDY+ILDE H IK+ ST+ A IP+++R++++GTP+QNNL+
Sbjct: 217 NGQAFV----------WDYVILDEAHKIKSASTKSAVCARAIPASNRLLLTGTPVQNNLQ 266
Query: 480 ELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
ELW+LF+F C LLG K FK +YE PI+R +K A EK +G +++ L E I+PYF
Sbjct: 267 ELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISENLMEIIKPYF 326
Query: 539 LRRLKNEV-----------FHEDDVTSSA-----TLSKKNEMIVWLRLTSCQRQLYEAFL 582
LRR K EV E + A +L++KN++IVW+RL Q ++Y F+
Sbjct: 327 LRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPLQEEIYRKFV 386
Query: 583 N----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
+ E+++ SPLA L +LKK+CDHP LL+ RA +LN A + +
Sbjct: 387 SLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACR--------LLNLGTATFSAQ 436
Query: 639 LAMHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQ 694
DV+ + D S K+ F++SLL++L EGH L+FSQ+ K+LN+I+
Sbjct: 437 DENEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIE 496
Query: 695 ESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIV 753
+ +K +K LRIDGT T +R K + FQ+ +FLLT+QVGG+GLTLT A RV++
Sbjct: 497 RLLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTAATRVVI 556
Query: 754 VDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT-EHK 812
DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK L + T E K
Sbjct: 557 FDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKK 616
Query: 813 EQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGV 872
RYF++Q+L+EL ++ S TQ QL H Q DE L+ HI +L LGIAG+
Sbjct: 617 NPFRYFTKQELKELFTV--GDLQKSATQMQLQCLHAAQRRSDEKLDEHIAYLHLLGIAGI 674
Query: 873 SHHSLLFSKTARVQ----VVQEEEEATRRKGTA-FVGNSSSSYLVARNVDGAE 920
S H L+F++ V+ ++++ + +R A F+ S S V R G E
Sbjct: 675 SDHDLMFTRDLSVKEELDMLEDSQYIHQRVQKAQFLVESESQNTVQRQTTGIE 727
>gi|156523172|ref|NP_001096000.1| DNA excision repair protein ERCC-6-like [Bos taurus]
gi|182645386|sp|A6QQR4.1|ERC6L_BOVIN RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like
gi|151554062|gb|AAI49964.1| ERCC6L protein [Bos taurus]
gi|296470840|tpg|DAA12955.1| TPA: DNA excision repair protein ERCC-6-like [Bos taurus]
Length = 1242
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/626 (41%), Positives = 386/626 (61%), Gaps = 53/626 (8%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGK-GGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N L+ +Q+EG+ +L+SL+ G+ GGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYQELHNQLYEYQKEGIAFLYSLYRDGRRGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P +L+S W++E +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTSLISTWLREFVKWTPGMRVKTFHGPSKDERTRNLCRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + SL G F+ WDY+ILDE H IK+ ST+ A IP+++RI
Sbjct: 204 MLINNWQQLSSLNGQEFL----------WDYVILDEAHKIKSSSTKSAICARAIPASNRI 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG + FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHEDD----------------VTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K EV + + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEEVQKKKSSNPEVQLSEKSPDVGAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARAC--------G 423
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLI 682
+LN A + + + D ++ D + D+ S K+ F++ LL KL EGH L+
Sbjct: 424 LLNLGAAKFSVQDEIEGEDSSDVDHIDQISDDTLMEESGKMLFLMDLLKKLRDEGHQTLV 483
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
FSQ+R++LN+I+ + ++ +K LRIDGT T +R K ++ FQ+ +FLLT+QVGG+
Sbjct: 484 FSQSRRILNIIERLLKNRHFKILRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGV 543
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK
Sbjct: 544 GLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFK 603
Query: 802 GGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAH 860
L + T + K RYFS+Q+LREL ++ + F S TQ QL H Q D++L+ H
Sbjct: 604 DSLIRQTTGDKKNPFRYFSKQELRELFTI--EDFQNSATQLQLQSLHAAQRRSDKNLDEH 661
Query: 861 IQFLDTLGIAGVSHHSLLFSKTARVQ 886
I FL +L IAG+S H L++++ V+
Sbjct: 662 IAFLHSLRIAGISDHDLMYTRDLSVK 687
>gi|383419435|gb|AFH32931.1| DNA excision repair protein ERCC-6-like [Macaca mulatta]
Length = 1252
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/626 (42%), Positives = 381/626 (60%), Gaps = 67/626 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ +L+ L+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHDQLFEHQKEGIAFLYRLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R+
Sbjct: 204 MLINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRL 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRA---------- 616
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACCLLNLGTFS 431
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A+D +G DS P+ HI + + +E S K+ F++ LL +L E
Sbjct: 432 AQDGNEGEDS---PD--------VDHIDQITDNTLMEE-----SGKMIFLMDLLKRLRDE 475
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLT 735
GH L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT
Sbjct: 476 GHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLT 535
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIY
Sbjct: 536 TQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLITCGTVEEKIY 595
Query: 796 RKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMD 854
R+Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 596 RRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSD 653
Query: 855 ESLEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 654 TKLDEHIAYLQSLGIAGISDHDLMYT 679
>gi|109131186|ref|XP_001092609.1| PREDICTED: DNA excision repair protein ERCC-6-like isoform 2
[Macaca mulatta]
Length = 1252
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/626 (42%), Positives = 381/626 (60%), Gaps = 67/626 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ +L+ L+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHDQLFEHQKEGIAFLYRLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R+
Sbjct: 204 MLINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRL 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRA---------- 616
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACCLLNLGTFS 431
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A+D +G DS P+ HI + + +E S K+ F++ LL +L E
Sbjct: 432 AQDGNEGEDS---PD--------VDHIDQITDNTLMEE-----SGKMIFLMDLLKRLRDE 475
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLT 735
GH L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT
Sbjct: 476 GHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLT 535
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIY
Sbjct: 536 TQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLITCGTVEEKIY 595
Query: 796 RKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMD 854
R+Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 596 RRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSD 653
Query: 855 ESLEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 654 TKLDEHIAYLQSLGIAGISDHDLMYT 679
>gi|395548628|ref|XP_003775239.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sarcophilus
harrisii]
Length = 1438
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 268/625 (42%), Positives = 387/625 (61%), Gaps = 40/625 (6%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S ML ++ + LF +Q+EG+ +L+SL+ + KGGIL DDMGLGKT+QI FL+ +F +
Sbjct: 121 SGLMLYRELHDQLFEYQKEGVAFLYSLYKENRKGGILADDMGLGKTIQIIAFLSAMFDAE 180
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+K L++ P +L+S WIKE ++ + G+ R L + + GV +TTY
Sbjct: 181 LVKYVLLIMPTSLISTWIKEFGKWTPGMRVATFHGSSKSERTRNLNRIQRKNGVAVTTYQ 240
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
+V NN + L + ++ +WDY+ILDE H IK+ ST+ + + IP +R++++
Sbjct: 241 MVINNWQQL-------SQLDGNEFVWDYLILDEAHKIKSSSTKSSIAARAIPVKNRLLLT 293
Query: 471 GTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
GTP+QNNL ELW+LF+F C LLG +K FK +YE PI R +K A EK +G +++
Sbjct: 294 GTPVQNNLYELWSLFDFACQGSLLGTSKTFKMEYENPITRAREKDATSGEKALGLKISEN 353
Query: 530 LRERIQPYFLRRLKNEV----------------FHEDDVTSSATLSKKNEMIVWLRLTSC 573
L I+PYFLRR K++V +D V +LS+KNE+I+W+ L
Sbjct: 354 LMTLIKPYFLRRTKDDVQKKNNTKAQSSLPEKKLGDDVVCEIPSLSRKNELIIWVYLVPL 413
Query: 574 QRQLYEAF--LNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
Q ++Y F LN L SPLA LTILKK+CDHP LL+ RA +L + + +
Sbjct: 414 QEEIYRKFVSLNHIKQLLMETRSPLAELTILKKLCDHPRLLSARAC-SLLGLKEGIFFNK 472
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
+ + I V + +E S K+ F+++LL +L EGH L+FSQ+R++L+
Sbjct: 473 GKNQEGQSEIQIDQVPPESLMKE-----SGKVIFLMALLKRLQDEGHQTLVFSQSRRLLD 527
Query: 692 LIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADR 750
+I+ + + +K LRIDGT T+ +R + ++ FQ+ A +FLLTSQVGG+GLTLT A R
Sbjct: 528 IIEHLLKKENFKTLRIDGTVTQLPERQRRIDLFQQSQDASVFLLTSQVGGVGLTLTAASR 587
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT- 809
V++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK L + T
Sbjct: 588 VVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTG 647
Query: 810 EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGI 869
+ K +RYFS+Q+LREL ++ F S TQ QLH H D++LE HI +L TLGI
Sbjct: 648 DQKNPVRYFSKQELRELFTI--GDFRSSPTQVQLHSLHAGHRKTDKTLEDHIAYLHTLGI 705
Query: 870 AGVSHHSLLFSKTARVQVVQEEEEA 894
AG+S H L+F+ VQEE EA
Sbjct: 706 AGISDHDLMFTHDVS---VQEESEA 727
>gi|402910520|ref|XP_003917922.1| PREDICTED: DNA excision repair protein ERCC-6-like [Papio anubis]
Length = 1256
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/626 (42%), Positives = 381/626 (60%), Gaps = 67/626 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ +L+ L+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 88 SGLLLYRELHDQLFEHQKEGIAFLYRLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 147
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 148 LVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 207
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R+
Sbjct: 208 MLINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRL 257
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 258 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 317
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 318 SENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRL 377
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRA---------- 616
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 378 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACCLLNLGTFS 435
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A+D +G DS P+ HI + + +E S K+ F++ LL +L E
Sbjct: 436 AQDGNEGEDS---PD--------VDHIDQITDNTLMEE-----SGKMIFLMDLLKRLRDE 479
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLT 735
GH L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT
Sbjct: 480 GHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLT 539
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIY
Sbjct: 540 TQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLITCGTVEEKIY 599
Query: 796 RKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMD 854
R+Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 600 RRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSD 657
Query: 855 ESLEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 658 TKLDEHIAYLQSLGIAGISDHDLMYT 683
>gi|355757463|gb|EHH60988.1| DNA excision repair protein ERCC-6-like protein [Macaca
fascicularis]
Length = 1252
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/626 (42%), Positives = 381/626 (60%), Gaps = 67/626 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ +L+ L+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHDQLFEHQKEGIAFLYRLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R+
Sbjct: 204 MLINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRL 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRA---------- 616
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACCLLNLGTFS 431
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A+D +G DS P+ HI + + +E S K+ F++ LL +L E
Sbjct: 432 AQDGNEGEDS---PD--------VDHIDQITDNTLMEE-----SGKMIFLMDLLKRLRDE 475
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLT 735
GH L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT
Sbjct: 476 GHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLT 535
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIY
Sbjct: 536 TQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLITCGTVEEKIY 595
Query: 796 RKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMD 854
R+Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 596 RRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSD 653
Query: 855 ESLEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 654 TKLDEHIAYLQSLGIAGISDHDLMYT 679
>gi|332263741|ref|XP_003280911.1| PREDICTED: DNA excision repair protein ERCC-6-like [Nomascus
leucogenys]
Length = 1250
Score = 477 bits (1228), Expect = e-131, Method: Compositional matrix adjust.
Identities = 263/626 (42%), Positives = 381/626 (60%), Gaps = 67/626 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHDQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ WIKE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLINTWIKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R+
Sbjct: 204 MLINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRL 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDIDAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRA---------- 616
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACCLLNLRTFS 431
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A+D +G DS P+ HI + + +E S K+ F++ LL +L E
Sbjct: 432 AQDGNEGEDS---PD--------VDHIDQITDDTLMEE-----SGKMIFLMDLLKRLRDE 475
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLT 735
GH L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ + +LT
Sbjct: 476 GHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVLMLT 535
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIY
Sbjct: 536 TQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 595
Query: 796 RKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMD 854
R+Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 596 RRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSD 653
Query: 855 ESLEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 654 TKLDEHIAYLQSLGIAGISDHDLMYT 679
>gi|395855223|ref|XP_003800069.1| PREDICTED: DNA excision repair protein ERCC-6-like [Otolemur
garnettii]
Length = 1253
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 264/622 (42%), Positives = 383/622 (61%), Gaps = 57/622 (9%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHDQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIIPTNLINTWVKEFVEWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ NN + L SSF E +WDY+ILDE H IK ST+ A IP+ +R++++
Sbjct: 204 MLINNWRQL--SSFNGQEF-----VWDYVILDEAHKIKTSSTKSAICARAIPAINRLLLT 256
Query: 471 GTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R K A EK +G +++
Sbjct: 257 GTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRARQKDATPGEKALGFKISEN 316
Query: 530 LRERIQPYFLRRLKNEVFHED-------------DVTSSA---TLSKKNEMIVWLRLTSC 573
L I+PYFLRR K E+ + DV ++ +LS+KN++I+W+RL
Sbjct: 317 LMAIIKPYFLRRTKEEIQKKKSSNLEVRISEKNPDVGATCEMPSLSRKNDLIIWIRLVPL 376
Query: 574 QRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAE---------DV 620
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA +
Sbjct: 377 QEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACQLLNLGTVKFSA 434
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
LDG + P+ HI + ++ +E S K+ F++ LL +L EGH
Sbjct: 435 LDGNEGEDFPD--------MDHIDQITDETLMEE-----SGKMIFLMDLLKRLRDEGHQT 481
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT+QVG
Sbjct: 482 LVFSQSRQILNIIEHLLKNRHFKTLRIDGTITHLLEREKRINLFQKNKDYSVFLLTTQVG 541
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+
Sbjct: 542 GVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQV 601
Query: 800 FKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLE 858
FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D+ L+
Sbjct: 602 FKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRRSDKKLD 659
Query: 859 AHIQFLDTLGIAGVSHHSLLFS 880
HI +L +LGIAG+S H L+++
Sbjct: 660 EHIAYLHSLGIAGISDHDLMYT 681
>gi|355704915|gb|EHH30840.1| DNA excision repair protein ERCC-6-like protein [Macaca mulatta]
Length = 1399
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 263/624 (42%), Positives = 380/624 (60%), Gaps = 63/624 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ +L+ L+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 231 SGLLLYRELHDQLFEHQKEGIAFLYRLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 290
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 291 LVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 350
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R+
Sbjct: 351 MLINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRL 400
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G +
Sbjct: 401 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKI 460
Query: 527 AKELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 461 SENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRL 520
Query: 571 TSCQRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRA----------AE 618
Q ++Y F++ + + L SPLA L +LKK+CDHP LL+ RA A+
Sbjct: 521 VPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACCLLNLGTFSAQ 580
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
D +G DS P+ HI + + +E S K+ F++ LL +L EGH
Sbjct: 581 DGNEGEDS---PD--------VDHIDQITDNTLMEE-----SGKMIFLMDLLKRLRDEGH 624
Query: 679 NVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT+Q
Sbjct: 625 QTLVFSQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLTTQ 684
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+
Sbjct: 685 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLITCGTVEEKIYRR 744
Query: 798 QIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDES 856
Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 745 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSDTK 802
Query: 857 LEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 803 LDEHIAYLQSLGIAGISDHDLMYT 826
>gi|395862525|ref|XP_003803497.1| PREDICTED: DNA excision repair protein ERCC-6-like [Otolemur
garnettii]
Length = 1252
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 263/622 (42%), Positives = 382/622 (61%), Gaps = 57/622 (9%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ + LF HQ+EG+ + +SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYRELHDQLFEHQKEGVAFFYSLYRDGRKGGILADDMGLGKTIQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L++ W+KE +++ + G R L + Q GV++TTY
Sbjct: 144 LVNHVLLIMPTNLINTWVKEFVKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQ 203
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ NN + L SSF E +WDY+ILDE H IK ST+ A IP+ +R++++
Sbjct: 204 MLINNWRQL--SSFNGQEF-----VWDYVILDEAHKIKTSSTKSAICARAIPAINRLLLT 256
Query: 471 GTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R K A EK +G +++
Sbjct: 257 GTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRARQKDATPGEKALGFKISEN 316
Query: 530 LRERIQPYFLRRLKNEVFHED-------------DVTSSA---TLSKKNEMIVWLRLTSC 573
L I+PYFLRR K E+ + DV ++ +LS+KN++I+W+RL
Sbjct: 317 LMAIIKPYFLRRTKEEIQKKKSSNLEVRISEKNPDVGATCEMPSLSRKNDLIIWIRLVPL 376
Query: 574 QRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAE---------DV 620
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA +
Sbjct: 377 QEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACQLLNLGTVKFSA 434
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
LDG + P+ HI + ++ +E S K+ F++ LL +L EGH
Sbjct: 435 LDGNEGEDFPD--------MDHIDQITDETLMEE-----SGKMIFLMDLLKRLRDEGHQT 481
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT+QVG
Sbjct: 482 LVFSQSRQILNIIEHLLKNRHFKTLRIDGTITHLLEREKRINLFQKNKDYSVFLLTTQVG 541
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+
Sbjct: 542 GVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQV 601
Query: 800 FKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLE 858
FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D+ L+
Sbjct: 602 FKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRRSDKKLD 659
Query: 859 AHIQFLDTLGIAGVSHHSLLFS 880
HI +L +LGIAG+S H L+++
Sbjct: 660 EHIAYLHSLGIAGISDHDLMYT 681
>gi|74007793|ref|XP_549075.2| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Canis lupus
familiaris]
Length = 1268
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 262/621 (42%), Positives = 383/621 (61%), Gaps = 43/621 (6%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F +
Sbjct: 106 SGLLLYRELHNQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAT 165
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L+ L++ P L+S WIKE +++ + G+ R L + Q GV++TTY
Sbjct: 166 LVSHVLLIMPTNLISTWIKEFVKWTPGMRVKTFHGSSKDERTRNLNRIQQRNGVIITTYQ 225
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + SL G F+ WDY+ILDE H IK ST+ A +P+ +RI
Sbjct: 226 MLINNWQQLSSLNGQEFV----------WDYVILDEAHKIKTSSTKSAICARAVPARNRI 275
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI+R +K A EK +G +
Sbjct: 276 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKIEYENPIMRAREKDATPGEKALGLKI 335
Query: 527 AKELRERIQPYFLRRLKNEV-----------FHE-----DDVTSSATLSKKNEMIVWLRL 570
++ L I+ +FLRR K EV F E D + +LS+KN++I+W+RL
Sbjct: 336 SENLMAIIKSHFLRRTKEEVQKKSSTPEEIRFSEKNPDGDAICKMPSLSRKNDLIIWIRL 395
Query: 571 TSCQRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDV-LDGMDSM 627
Q ++Y F++ + + L SPLA L +LKK+CDHP LL+ RA + L +
Sbjct: 396 RPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARARHLLSLGSVKFS 455
Query: 628 LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
+ E+ HI V + +E S K+ F++ LL +L EGH L+FSQ+R
Sbjct: 456 VQGENEGEDASDVDHIDHVTDDTLMEE-----SGKMIFLIELLRRLRDEGHQTLVFSQSR 510
Query: 688 KMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLT 746
++LN+I+ + ++ +K LR+DGT T +R K ++ FQ+ +FLLT+QVGG+GLTLT
Sbjct: 511 QILNIIERLLKNRHFKILRVDGTVTHLVEREKRIHLFQQNKDYSVFLLTTQVGGVGLTLT 570
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
A RV++ DP+WNP+TD Q+VDR YRIGQK+++VVYRL+TCGTVEEKIYR+Q+FK L +
Sbjct: 571 AATRVVIFDPSWNPATDAQAVDRVYRIGQKENIVVYRLITCGTVEEKIYRRQVFKDSLIR 630
Query: 807 TAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLD 865
T + K RYF++Q+LREL ++ + F S TQ QL H Q D+ L+ HI +L
Sbjct: 631 QTTGDKKNPFRYFTKQELRELFTI--EDFQNSATQLQLQSLHAAQRRSDKILDEHIAYLH 688
Query: 866 TLGIAGVSHHSLLFSKTARVQ 886
+LGIAG+S H L++++ V+
Sbjct: 689 SLGIAGISDHDLMYTRDLSVK 709
>gi|327290729|ref|XP_003230074.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 697
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 258/615 (41%), Positives = 387/615 (62%), Gaps = 45/615 (7%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSL-HCQGKGGILGDDMGLGKTMQICGFLAGLFHS 349
+S M+ ++ + LF HQ+EG+ +L++L H + +GGIL DDMGLGKT+QI FL+G+F +
Sbjct: 54 QSGLMICRELHDKLFEHQKEGVAFLYNLYHKKRQGGILADDMGLGKTIQIIAFLSGMFDA 113
Query: 350 RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
L++ L++ P TL+++W++E +++ + GT K R+ L+ + + GVLLT+Y
Sbjct: 114 GLVRSVLLIMPVTLVNNWMREFANWVPGIRVKVFHGTSKKEREQNLEQIQRRTGVLLTSY 173
Query: 410 DIVRNNSKSLR---GSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHR 466
+V N + L G F+ W+Y+ILDE H IK+PS + KS+ IP+ +R
Sbjct: 174 QMVLANWEQLSNLDGQPFV----------WNYVILDEAHKIKSPSAKTTKSVYGIPAVNR 223
Query: 467 IIISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSA 525
I+++GTP+QNNL+ELWALF+F C LLG K FK +YE PI++ +K A EK +G
Sbjct: 224 ILLTGTPVQNNLRELWALFDFACQGSLLGTAKTFKMEYESPIMKAREKDATLGEKALGLK 283
Query: 526 VAKELRERIQPYFLRRLKNEVFHEDDVTSSA--------------TLSKKNEMIVWLRLT 571
+++ L I+PYFLRR K E+ + S +L +KN+ IVW+ L
Sbjct: 284 ISQNLMAIIKPYFLRRSKGEILKLNSERSVCLTGEERDYIALEMPSLPRKNDFIVWVYLA 343
Query: 572 SCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSM 627
Q +Y FL+ E++++ SPLA LT+LKK+CDHP LL+ +A ++ +
Sbjct: 344 PMQEDIYRNFLSLDHIKELLMTT--RSPLAELTVLKKLCDHPRLLSAQACANLGLEVSEY 401
Query: 628 LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
P D + + I V++K +E S K+ F+++LL+KL EGH L+FSQ+R
Sbjct: 402 SEPTDQSTLS-MTQDIKRVSDKLLIEE-----SGKLVFLVALLEKLQEEGHQTLVFSQSR 455
Query: 688 KMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLT 746
KML++I+ + + ++ +R+DGT T ++R K V FQ +FLLT+QVGG+GLTLT
Sbjct: 456 KMLDIIEHILTKRSFRLMRVDGTVTCLAEREKRVRQFQMDKSYSVFLLTTQVGGVGLTLT 515
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
A RV++ DP+WNP+TD Q+VDRAYRIGQK++VV+YRL+TCGTVEEKIYR+Q+FK L +
Sbjct: 516 SATRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIQ 575
Query: 807 TAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLD 865
+T + K RYF+QQ+LREL +L + S TQ QL H Q N D L+ HI +L
Sbjct: 576 QSTGDKKNPYRYFTQQELRELFTL--EDTTSSATQLQLQSLHATQRNSDLELDEHIAYLH 633
Query: 866 TLGIAGVSHHSLLFS 880
TL + G+S H L+++
Sbjct: 634 TLEMFGISDHDLMYT 648
>gi|153792503|ref|NP_001093563.1| DNA excision repair protein ERCC-6-like [Danio rerio]
gi|182645387|sp|A2BGR3.1|ERC6L_DANRE RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like
Length = 1451
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/607 (41%), Positives = 382/607 (62%), Gaps = 45/607 (7%)
Query: 304 LFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKT 362
L+ HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+Q+ FL+G++ + L L+V P +
Sbjct: 105 LYDHQKEGVAFLYSLYRDGRKGGILADDMGLGKTIQVISFLSGMYDAELANHTLLVMPTS 164
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGS 422
L+ +W++E +++E+ G+ R L+ + + GV++TTY ++ NN + L GS
Sbjct: 165 LIKNWVREFAKWTPGMRVKEFHGSSKTERNRNLERIQRKGGVIITTYQMLINNYEQL-GS 223
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELW 482
+ G + WDY+ILDE H IK ST+ AKS IP+ +R++++GTP+QNNL+E+W
Sbjct: 224 N------GHREFKWDYVILDEAHKIKTSSTKTAKSAHAIPAKNRVLLTGTPVQNNLREMW 277
Query: 483 ALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRR 541
ALF+F C LLG +K FK +YE PI R +K A EK +G +++ L + I+PYFLRR
Sbjct: 278 ALFDFACQGSLLGTSKTFKTEYENPITRAREKDATPGEKALGLRISQNLTDIIKPYFLRR 337
Query: 542 LK---------------------NEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
K N+ + + +L++KN++IVW L+S Q +Y
Sbjct: 338 TKADVQQKKLKLEEGFEEEEDQENKCPNAREGVEMPSLTRKNDLIVWTYLSSVQEDIYNK 397
Query: 581 FLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDV--LDGMDSMLNPEDAALA 636
F++ + + L SPLA LT+LKK+CDHP LL++RA + G DS L D +
Sbjct: 398 FISLDQIKELLTTTRSPLAELTVLKKLCDHPRLLSQRAVIQLGLERGSDSELVHSDES-- 455
Query: 637 EKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQES 696
E I ++++ +E S K+ F++SL++ L EGH LIFSQ+RKML++++
Sbjct: 456 ESAVSQIDNISDHTLIEE-----SGKLQFVVSLMECLREEGHRTLIFSQSRKMLDIMERV 510
Query: 697 IGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVD 755
+ ++ ++ LR+DGT T+ ++R K ++ FQ IFLLT+QVGG+G+TLT A+RV++ D
Sbjct: 511 LRNRNFRLLRLDGTVTQLAEREKRISLFQTDKRYTIFLLTTQVGGVGITLTGANRVVIFD 570
Query: 756 PAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT-EHKEQ 814
P+WNP+TD Q+VDRAYRIGQ ++V++YRL+TCGTVEEKIYR+Q+FK L + T + K
Sbjct: 571 PSWNPATDAQAVDRAYRIGQTENVIIYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNP 630
Query: 815 IRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSH 874
RYFS+Q+LREL L + S TQQQL H D SL+ HI L ++ + G+S
Sbjct: 631 FRYFSKQELRELFKL--EDTRSSSTQQQLQAMHAQSRRSDTSLDHHIARLHSMEMFGISD 688
Query: 875 HSLLFSK 881
H L+F+K
Sbjct: 689 HDLMFTK 695
>gi|327290056|ref|XP_003229740.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 697
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 258/615 (41%), Positives = 386/615 (62%), Gaps = 45/615 (7%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSL-HCQGKGGILGDDMGLGKTMQICGFLAGLFHS 349
+S M+ ++ + LF HQ+EG+ +L++L H + +GGIL DDMGLGKT+QI FL+G+F +
Sbjct: 54 QSGLMICRELHDKLFEHQKEGVAFLYNLYHKKRQGGILADDMGLGKTIQIIAFLSGMFDA 113
Query: 350 RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
L++ L++ P TL+++W++E +++ + GT K R+ L+ + + GVLLT+Y
Sbjct: 114 GLVRSVLLIMPVTLVNNWMREFANWVPGIRVKVFHGTSKKEREQNLEQIQRRTGVLLTSY 173
Query: 410 DIVRNNSKSLR---GSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHR 466
+V N + L G F+ W+Y+ILDE H IK+PS + KS+ IP+ +R
Sbjct: 174 QMVLANWEQLSNLDGQPFV----------WNYVILDEAHKIKSPSAKTTKSVYGIPAVNR 223
Query: 467 IIISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSA 525
I+++GTP+QNNL+ELWALF+F C LLG K FK +YE PI++ +K A EK +G
Sbjct: 224 ILLTGTPVQNNLRELWALFDFACQGSLLGTAKTFKMEYESPIMKAREKDATLGEKALGLK 283
Query: 526 VAKELRERIQPYFLRRLKNEVFHEDDVTSSA--------------TLSKKNEMIVWLRLT 571
+++ L I+PYFLRR K E+ + S +L +KN+ IVW+ L
Sbjct: 284 ISQNLMAIIKPYFLRRSKGEILKLNSERSVCLTGEERDYIALEMPSLPRKNDFIVWVYLA 343
Query: 572 SCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSM 627
Q +Y FL+ E++++ SPLA LT+LKK+CDHP LL+ +A + +
Sbjct: 344 PMQEDIYRNFLSLDHIKELLMTT--RSPLAELTVLKKLCDHPRLLSAQACASLGLEVSEY 401
Query: 628 LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
P D + + I V++K +E S K+ F+++LL+KL EGH L+FSQ+R
Sbjct: 402 SEPTDQSTLS-MTQDIKRVSDKLLIEE-----SGKLVFLVALLEKLQEEGHQTLVFSQSR 455
Query: 688 KMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLT 746
KML++I+ + + ++ +R+DGT T ++R K V FQ +FLLT+QVGG+GLTLT
Sbjct: 456 KMLDIIEHILTKRSFRLMRVDGTVTCLAEREKRVRQFQMDKSYSVFLLTTQVGGVGLTLT 515
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
A RV++ DP+WNP+TD Q+VDRAYRIGQK++VV+YRL+TCGTVEEKIYR+Q+FK L +
Sbjct: 516 SATRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIQ 575
Query: 807 TAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLD 865
+T + K RYF+QQ+LREL +L + S TQ QL H Q N D L+ HI +L
Sbjct: 576 QSTGDKKNPYRYFTQQELRELFTL--EDTTSSATQLQLQSLHATQRNSDLELDEHIAYLH 633
Query: 866 TLGIAGVSHHSLLFS 880
TL + G+S H L+++
Sbjct: 634 TLEMFGISDHDLMYT 648
>gi|432950140|ref|XP_004084404.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oryzias
latipes]
Length = 1121
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 266/628 (42%), Positives = 397/628 (63%), Gaps = 52/628 (8%)
Query: 280 EDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQ 338
EDE ++ S +ML ++ + L+ +QREG+ +L+ L+ G KGGIL DDMGLGKT+Q
Sbjct: 116 EDEDDEFVNVNNSGFMLYKELHDKLYGYQREGVSFLYGLYRDGRKGGILADDMGLGKTIQ 175
Query: 339 ICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
+ FL+G++ + LIK L++ P +L+++WIKE + +++E+ G R L+ V
Sbjct: 176 VISFLSGMYDNELIKHTLLIMPTSLITNWIKEFSRWTPGMRVKEFHGASKAERTRSLEKV 235
Query: 399 LQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL 458
+ GV++TTY+++ NN + L SS+ E WDY+ILDE H IKN S++ AKS
Sbjct: 236 QRRSGVVITTYNMLLNNWQQL--SSYQGKEF-----CWDYVILDEAHKIKNTSSKTAKSA 288
Query: 459 LEIPSAHRIIISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALD 517
IPS +R++++GTP+QNNL+E+WALF+F C LLG K FK +YE PI R +K A
Sbjct: 289 YAIPSKNRVLLTGTPVQNNLREMWALFDFACQGTLLGTGKTFKTEYENPITRAREKDATP 348
Query: 518 REKRIGSAVAKELRERIQPYFLRRLK-----NEVFHEDDVTSSA--------------TL 558
EK +GS ++ L I+PYFLRR K NE+ ++ + SSA L
Sbjct: 349 GEKALGSRMSDNLMAIIKPYFLRRTKAEVQRNELCEKEKLHSSAENQEDQPDPAAAMPQL 408
Query: 559 SKKNEMIVWLRLTSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTK 614
+KN++IVW L++ Q ++Y F++ E++L+ SPLA LT+LKK+CDHP LL+
Sbjct: 409 KRKNDLIVWTYLSAVQEEIYRQFIDLDCIKELLLTT--RSPLAELTVLKKLCDHPRLLST 466
Query: 615 RAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLI 674
D + + E+AA A IADV + E S K++F+++LL++L
Sbjct: 467 -------DALARLGLEENAADAAAHG--IADVPDHTLISE-----SGKLAFLVALLERLR 512
Query: 675 PEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFL 733
EG LIF+ RK+L++I+ + ++G+K LR+DGT T+ ++R ++++ FQ+ +FL
Sbjct: 513 EEGQRTLIFAHYRKVLDIIERILNNRGFKVLRLDGTITQITERERLISLFQKDRSYSVFL 572
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT+QVGG+G+TLT A+RV++ DP+WNP+TD Q+VDRAYRIGQ ++VV+YRL+TCGTVEEK
Sbjct: 573 LTTQVGGVGITLTAANRVVIYDPSWNPATDAQAVDRAYRIGQTENVVIYRLITCGTVEEK 632
Query: 794 IYRKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHN 852
IYR+Q+FK L + T + K RYFS+Q+L+EL +L + S TQ QL H
Sbjct: 633 IYRRQVFKDSLIRQNTGDKKNPFRYFSKQELKELFTL--EDTRSSSTQLQLQALHSRHRQ 690
Query: 853 MDESLEAHIQFLDTLGIAGVSHHSLLFS 880
D L+ HI L T+ I G+S H L+FS
Sbjct: 691 TDPQLDQHIAHLHTMEIFGISDHDLMFS 718
>gi|395519787|ref|XP_003764023.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sarcophilus
harrisii]
Length = 1197
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 263/611 (43%), Positives = 376/611 (61%), Gaps = 37/611 (6%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S ML + + LF HQ+EG+ +L+SL+ + KGGIL DDMGLGKT+QI FL+ +F +
Sbjct: 88 SGLMLYRDLHDRLFEHQKEGVAFLYSLYKERRKGGILADDMGLGKTVQILAFLSAMFDAE 147
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L++ L++ P +L+S W KE ++ + G+ R L + ++ GV +TTY
Sbjct: 148 LVRFVLLIMPTSLISTWTKEFDKWTPGMRVATFHGSSKNERIRNLNRIQRNNGVAITTYQ 207
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ NN + L + + +WDY+ILDE H IK+ ST+ + + IP +RI+++
Sbjct: 208 MLVNNWQQL-------SQLDGKEFVWDYLILDEAHKIKSSSTKSSIAARAIPVKNRILLT 260
Query: 471 GTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
GTPIQNNL ELW+LF+F C LLG +K FK +YE PI R +K A EK +G +++
Sbjct: 261 GTPIQNNLYELWSLFDFACQGSLLGTSKTFKIEYENPITRAREKDATPGEKVLGLKISEN 320
Query: 530 LRERIQPYFLRRLKNEV----------------FHEDDVTSSATLSKKNEMIVWLRLTSC 573
L I+PYFLRR K ++ +D + LS+KNE+I+W+ L
Sbjct: 321 LMALIKPYFLRRTKEDIQKKSTNKPLRNLPEKNLDDDIIYEIPFLSRKNELIIWVYLVPL 380
Query: 574 QRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
Q ++Y FL+ + L SPLA LT+LKK+CDHP LL+ RA +L + + E
Sbjct: 381 QEEIYRKFLSLNHIKQLLMETHSPLAELTVLKKLCDHPRLLSARAC-SLLGLKEGNFSGE 439
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
D + + I V + QE S K+ F+++LL +L EGH L+FSQ+RK+L+
Sbjct: 440 DESQMAHSNIQIDQVPHESLMQE-----SGKVIFLMALLKRLQDEGHQTLVFSQSRKLLD 494
Query: 692 LIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADR 750
+I+ + + +K LRIDGT T S+R + ++ FQ+ +FLLTSQVGGLGLTLT A R
Sbjct: 495 IIEHLLKKENFKTLRIDGTVTHLSERQRRIDLFQQSQDVSVFLLTSQVGGLGLTLTSATR 554
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT- 809
VI+ DP+WNP+TD Q+VDR YRIGQK++VVVYRL++CGTVEEKIYR+Q+FK L + T
Sbjct: 555 VIIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLISCGTVEEKIYRRQVFKDSLIRQTTG 614
Query: 810 EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGI 869
+ K RYFS+Q+LREL ++ F S TQ QLH H D+ LE HI +L TLGI
Sbjct: 615 DQKNPARYFSKQELRELFTIG--DFRSSATQLQLHSLHAGHRKTDKKLEEHIAYLHTLGI 672
Query: 870 AGVSHHSLLFS 880
AG+S H L+F+
Sbjct: 673 AGISDHDLMFT 683
>gi|308802858|ref|XP_003078742.1| DNA repair protein, SNF2 family (ISS) [Ostreococcus tauri]
gi|116057195|emb|CAL51622.1| DNA repair protein, SNF2 family (ISS) [Ostreococcus tauri]
Length = 851
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 277/767 (36%), Positives = 411/767 (53%), Gaps = 85/767 (11%)
Query: 289 GPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH 348
GP+ + L ++ L+ HQR+G+RW+W LH G+GGIL DDMGLGKT+Q C F+ GL
Sbjct: 38 GPK--FELHAELATRLYDHQRDGIRWMWGLHLAGRGGILADDMGLGKTLQACAFVTGLLR 95
Query: 349 SRLIKRALVVAPKTLLSHWIKELTAVGL--SAKIREYFGTCVKTRQYELQYVLQDKGVLL 406
S KR LV+AP TLL HW+KE GL + +Y+ +R+ L+ + +GVLL
Sbjct: 96 SGAAKRVLVLAPTTLLPHWLKEFETCGLKEGKTVFKYYSGTQSSRERNLRACVSGRGVLL 155
Query: 407 TTYDIVRNNSKSLRGSSFISDEAGDDDAI--------------------WDYMILDEGHL 446
+Y +V + L S DD+A+ WD++++DEGH
Sbjct: 156 ASYGMVTTRASELGAPS------DDDEAMKAMGREGRGGVPRDFAGTFRWDWVVMDEGHT 209
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KNP+TQ A+ + +IP+ R+I++GTP+QN L ELW+L++ CP LLG F+ ++
Sbjct: 210 LKNPATQLAQKVRQIPANLRMIVTGTPVQNVLSELWSLYDLTCPGLLGGENDFRRQFANK 269
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT--------- 557
I G A +++ + LR+ +PYFLRR K+E+ +DD T
Sbjct: 270 ITAGQAASATQKQRAESKELTMTLRQLTRPYFLRREKSEILAKDDAKEEVTEDLSKASSS 329
Query: 558 --------------LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD--GSPLAALTI 601
L +KN+ I W+ L QR LY FL S + A + GS +A +
Sbjct: 330 SMTSWKNVKNVPSALGQKNDFIAWIPLDPAQRALYTKFLASRPIQDAINKTGSAIACMNT 389
Query: 602 LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMH--IADVAEKDDFQEQHDNI 659
LKKICDHP L AED D + + P D A+ E + + + A + + ++
Sbjct: 390 LKKICDHPSLCVGAQAEDDSDAVTTE-GPVDHAVEEDVELRKSCSGEAAAAACRGRSPSL 448
Query: 660 SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKI 719
S K F++S+L++ EGH L+FSQ++ L++I+ +I F+RIDG +R +
Sbjct: 449 SAKSKFLMSMLERFRIEGHRTLVFSQSQATLDIIEANIREANIDFVRIDGKVNVDERDRR 508
Query: 720 VNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDV 779
V F+ D P+ LLT++VGGLGLTLT+A RVI+ DPAWNP+TDNQSVDRAYRIGQ KDV
Sbjct: 509 VTKFRSQDDIPVMLLTARVGGLGLTLTEATRVIIFDPAWNPTTDNQSVDRAYRIGQTKDV 568
Query: 780 VVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLT 839
VVYR++TCGT+EEK+YR+Q+FKG L K T+ +YF D ++ + + S T
Sbjct: 569 VVYRMVTCGTIEEKVYRRQVFKGSLSKACTDGVSGRQYFDADDASQMFEITEHAASSSET 628
Query: 840 QQQLHEEHGDQHNMDESLEAHIQFLDTL-GIAGVSHHSLLFSK----TARVQVVQEEEEA 894
+QL+ H L I ++++L + GVS H LLFSK A Q ++
Sbjct: 629 MKQLNMLHAIDRKWTNELRREIPYVESLPCVCGVSDHDLLFSKEDEAVAPSQAAPKQSTG 688
Query: 895 ---TRRKGTAFVG------NSS---------SSYLVARNVD-GAEYAFNPRDIKLNKKSS 935
T KG A G NS+ ++L A G A ++I +++KS
Sbjct: 689 GVTTTPKGKAPGGAAWKDVNSAWGGDGGLLGGAFLRALTPSKGPSSAAKVKNIDVDEKSP 748
Query: 936 S-PKNEAKLKESD--IKERIKRLSQLISNKVTVERLPDKGTKLQKQI 979
EAKL+ I +++ ++S V+++PDKG ++K I
Sbjct: 749 EHVSGEAKLRAKIDLIASDVEKQRVILSMPDVVDKIPDKGESVRKAI 795
>gi|126342880|ref|XP_001372665.1| PREDICTED: DNA excision repair protein ERCC-6-like [Monodelphis
domestica]
Length = 1189
Score = 471 bits (1211), Expect = e-129, Method: Compositional matrix adjust.
Identities = 266/617 (43%), Positives = 384/617 (62%), Gaps = 49/617 (7%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHC-QGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
S ML G++ + LF +Q+EG+ +L+SL+ + KGGIL DDMGLGKT+QI FL+ +F +
Sbjct: 85 SGLMLYGELHDRLFEYQKEGVAFLYSLYKDKRKGGILADDMGLGKTVQIIAFLSAMFDAE 144
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L++ L++ P +L+S W+KE ++ + G+ R L + + GV +TTY
Sbjct: 145 LVRHVLLIMPSSLISTWVKEFAKWTPGMRVATFHGSSKSERTKNLTRIQRKSGVAITTYQ 204
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ NN + L + + +WDY+ILDE H IK+ ST+ +K IP +RI+++
Sbjct: 205 MLINNWQQL-------SQMDGKEFVWDYLILDEAHKIKSSSTKSSKIARCIPVKNRILLT 257
Query: 471 GTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
GTPIQNNL ELW+LF+F C LLG +K FK +YE PI+R +K A EK +G +++
Sbjct: 258 GTPIQNNLYELWSLFDFACQGSLLGTSKTFKMEYENPIIRAREKDATIGEKALGFKISEN 317
Query: 530 LRERIQPYFLRRLKNEVFHED----------------DVTSSATLSKKNEMIVWLRLTSC 573
L I+PYFLRR K +V + D +LS+KNE+I+W+RL
Sbjct: 318 LMTLIKPYFLRRTKEDVQKKSANNKQSSLPEKDPGGADFCEMPSLSRKNELIIWVRLVPL 377
Query: 574 QRQLYEAF--LNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
Q ++Y F LN L SPLA L +LKK+CDHP LL+ R S+L +
Sbjct: 378 QEEIYRKFVSLNHIKQLMIETRSPLAELNVLKKLCDHPRLLSARVC--------SLLGLK 429
Query: 632 DAALA---EKLAMHIADVAEKDDFQEQHDNI---SCKISFILSLLDKLIPEGHNVLIFSQ 685
++L+ E +H +D+ Q HD++ S K+ F+++LL +L EGH L+FSQ
Sbjct: 430 GSSLSGGDESQLVH-SDIQMD---QIPHDSLMQESGKVIFLMALLKRLQDEGHQTLVFSQ 485
Query: 686 TRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
+RK+L++I+ + ++ +K LRIDGT T S+R + ++ FQ+ +FLLTSQVGG+GLT
Sbjct: 486 SRKLLDIIEHLLKAEHFKTLRIDGTVTHLSERQRRIDLFQQSRGVSVFLLTSQVGGVGLT 545
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
LT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK L
Sbjct: 546 LTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 605
Query: 805 FKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQF 863
+ T + K RYF++Q+LREL +L F S TQ QLH H D+ LE HI +
Sbjct: 606 VRQTTGDKKNPFRYFTKQELRELFTL--GDFRSSATQLQLHSLHAGHRKTDKKLEEHIAY 663
Query: 864 LDTLGIAGVSHHSLLFS 880
L TLGIAG+S H L+F+
Sbjct: 664 LHTLGIAGISDHDLMFT 680
>gi|348536122|ref|XP_003455546.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oreochromis
niloticus]
Length = 1270
Score = 461 bits (1186), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/623 (40%), Positives = 377/623 (60%), Gaps = 54/623 (8%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR 350
S ML ++ + L+ +QR+G+ +L+SL+ G KGGIL DDMGLGKT+Q+ FL+G++ +
Sbjct: 96 SGLMLFKELYDKLYDYQRDGVAFLYSLYRDGRKGGILADDMGLGKTIQVISFLSGMYDNE 155
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L K L++ P +L+++W KE + +++E+ G R L+ V + GV++TTY
Sbjct: 156 LAKHTLLIMPTSLITNWTKEFSKWTPGMRVKEFHGISKGERTRNLEKVQRRGGVIITTYT 215
Query: 411 IVRNNSKSL---RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + L G F WDYMILDE H IK+ +T+ AKS IPS +R+
Sbjct: 216 MLLNNWQQLSTHNGKEFT----------WDYMILDEAHKIKSTTTKTAKSAYAIPSKNRV 265
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++GTP+QNNL+E+WALF+F C LLG K FK +YE I R +K A EK +GS +
Sbjct: 266 LLTGTPVQNNLREMWALFDFACQGTLLGTAKTFKAEYENSITRAREKDATPGEKALGSRM 325
Query: 527 AKELRERIQPYFLRRLKNEV-----------------------FHEDDVTSSATLSKKNE 563
++ L I+PYFLRR K+EV D L++KN+
Sbjct: 326 SENLMAIIKPYFLRRTKSEVQKNKTNRTHNKEHLEDKEDHVPNLEADSGAVMPKLTRKND 385
Query: 564 MIVWLRLTSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAED 619
+IVW L++ Q +Y F++ E++L+ SPLA L ILKK+CDHP LL+ AA
Sbjct: 386 LIVWTYLSAIQEDIYRQFISLDHIRELLLTT--RSPLAELNILKKLCDHPRLLSA-AAIA 442
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
L +S ++ E I V + E S K+ F+ SLL++L EGH
Sbjct: 443 KLGLEESAAECQETTDTEPSDHSITSVPDDTLISE-----SGKMVFLFSLLERLRQEGHR 497
Query: 680 VLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQV 738
L+F+ RK+L++I+ + ++G+K LR+DGT T+ ++R ++++ FQ +FLLT+QV
Sbjct: 498 TLVFAHYRKVLDIIERILSNRGFKVLRLDGTITQITERERLISLFQTDKRYSVFLLTTQV 557
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG+G+TLT A+RV++ DP+WNP+TD Q+VDRAYRIGQ ++VV+YRL+TCGTVEEKIYR+Q
Sbjct: 558 GGVGITLTAANRVVIYDPSWNPATDAQAVDRAYRIGQTENVVIYRLITCGTVEEKIYRRQ 617
Query: 799 IFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESL 857
+FK L + T + K RYFS+Q+L+EL +L + S TQ QL H D L
Sbjct: 618 VFKDSLIRQNTGDKKNPFRYFSKQELKELFTL--EDTRSSSTQLQLQALHARHRRTDPEL 675
Query: 858 EAHIQFLDTLGIAGVSHHSLLFS 880
+ HI L T+ + G+S H L+F+
Sbjct: 676 DKHIAHLHTMEMFGISDHDLMFT 698
>gi|410922411|ref|XP_003974676.1| PREDICTED: DNA excision repair protein ERCC-6-like [Takifugu
rubripes]
Length = 1289
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 262/648 (40%), Positives = 398/648 (61%), Gaps = 68/648 (10%)
Query: 275 DDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQG-KGGILGDDMGL 333
+DS +D+ + ++G S ML + L+ +QR+G+ +L+SL+ G KGGIL DDMGL
Sbjct: 53 NDSEEDDDEFVNVNG--SGLMLFKDLHEKLYNYQRQGVAFLYSLYRDGLKGGILADDMGL 110
Query: 334 GKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQY 393
GKT+Q+ FL+G++ S L+K L++ P +L+++W KE +++E+ GT R
Sbjct: 111 GKTIQVISFLSGMYDSELVKHTLLIMPTSLITNWTKEFAKWTPGMRVKEFHGTSKGERSR 170
Query: 394 ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQ 453
L V + G+++TTY ++ NN + L SS+ E WDY+ILDE H IK +T+
Sbjct: 171 NLGKVQRRGGIVITTYTMLMNNWQQL--SSYNGKEF-----TWDYVILDEAHKIKTTTTK 223
Query: 454 RAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGND 512
AKS IPS HR++++GTP+QNNLKE+W+LF+F C LLG K FK +YE PI R +
Sbjct: 224 TAKSAYAIPSKHRVLLTGTPVQNNLKEMWSLFDFACQGTLLGTAKTFKTEYENPITRARE 283
Query: 513 KHALDREKRIGSAVAKELRERIQPYFLRRLKNEV---------FHEDDVTSSA------- 556
K A EK +GS +++ L I+P+FLRR K ++ F +++ T+ A
Sbjct: 284 KDATPGEKVLGSRMSENLMTIIKPHFLRRTKADIRKNKVDSVYFCKEETTAKAHADIPET 343
Query: 557 ---------TLSKKNEMIVWLRLTSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILK 603
TL++KN++IVW L+S Q +Y F++ E++L+ SPLA LTILK
Sbjct: 344 PQTSGAVMPTLTRKNDLIVWTYLSSIQEDIYRQFISLDHIKELLLTT--RSPLAELTILK 401
Query: 604 KICDHPLLLTKRA---------AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQE 654
K+CDHP LL+ A E+ L G D+ ++ E A I++V+++ E
Sbjct: 402 KLCDHPRLLSAAAITKLGLEERGENALVGDDTAVDAE--------AQGISNVSDETLISE 453
Query: 655 QHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKA- 713
S K+ F+ LL++L EG L+F+ RK+L++++ +G++G+K +R+DGT K
Sbjct: 454 -----SGKLVFLFRLLERLREEGCRTLVFAHYRKVLDILERILGNRGFKVMRLDGTIKQI 508
Query: 714 SDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRI 773
++R + ++ FQ +FLLT+QVGG+G+TLT A+RV++ DP+WNP+TD Q+VDRAYRI
Sbjct: 509 TERERRISLFQMDRSYSVFLLTTQVGGVGITLTAANRVVIYDPSWNPATDAQAVDRAYRI 568
Query: 774 GQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQ 832
GQ ++VV+YRL+TCGTVEEKIYR+Q+FK L + +T + K RYFS+Q+L+EL +L +
Sbjct: 569 GQTENVVIYRLITCGTVEEKIYRRQVFKDSLIRQSTGDKKNPFRYFSKQELKELFTLEET 628
Query: 833 GFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFS 880
S TQ QL H D L+ HI L + + G+S H L+FS
Sbjct: 629 R--SSSTQLQLQALHSRHRWTDPQLDEHIAHLHGMEMFGISDHDLMFS 674
>gi|391348669|ref|XP_003748567.1| PREDICTED: DNA excision repair protein ERCC-6-like [Metaseiulus
occidentalis]
Length = 966
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 261/636 (41%), Positives = 375/636 (58%), Gaps = 41/636 (6%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y L KI + LFP+Q + L+W++ LH + KGG+LGDDMGLGKT+Q+ +LAGLF +K
Sbjct: 12 YYLHKKIQSRLFPYQIDALKWMYRLHQRKKGGVLGDDMGLGKTIQVIAYLAGLFDMEKVK 71
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVR 413
L++ P +L+ +W E + +Y + ++ L+ V+ GV+LTTY +V
Sbjct: 72 SVLLIMPVSLIGNWCTEFEKWAPGITVYDYHSATKREKELFLKKVMNRGGVILTTYGMVT 131
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
+ LR + G IWDY+ILDEGH IKNP T+ ++ +P+ HR++++GT
Sbjct: 132 TRHEDLRNN-------GSRRFIWDYVILDEGHKIKNP-TKTQSAVFGLPAHHRLVLTGTA 183
Query: 474 IQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
+QNNL ELW+L++F L G+ FK+ +E PI RG ++ A E+ +G +AK+L+E
Sbjct: 184 VQNNLSELWSLYHFTHQGTLFGNLAGFKQDFETPINRGRERDAKPGEREMGVQLAKQLKE 243
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF- 591
I PYFLRR K EVF T ++K ++++W L+ Q++LY FL S+ V +
Sbjct: 244 MIAPYFLRRTKAEVFRSG--TGPRIEAQKEDLVLWTYLSETQQELYRDFLQSDDVKAILL 301
Query: 592 -DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAE---KLAMHIADVA 647
SPL L ILKKICDHP LL K+A L D M E E I DV+
Sbjct: 302 TSKSPLVQLNILKKICDHPRLLPKKACVQ-LGLCDDMTEAEIQEFLEDDKHCPFSIDDVS 360
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRI 707
++D E S K+ +L L ++L EGH LIFS +R++L++IQ + S + R+
Sbjct: 361 DEDLLNE-----SGKMRLMLKLTEQLREEGHRTLIFSTSRRILDMIQRILRSHRFTISRL 415
Query: 708 DGTT-KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
DGT K ++R +IV+ FQ+ + +FLLT+QVGG+GLTLT ADRVI+ DP WNP+TD Q+
Sbjct: 416 DGTIHKTAERKRIVDTFQKQG-SDVFLLTTQVGGVGLTLTNADRVIIYDPNWNPATDAQA 474
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH-KEQIRYFSQQDLRE 825
VDRA+RIGQ +DV+VYRL+TCGTVEEKIY +QIFK + K T + + RYF++ LR+
Sbjct: 475 VDRAFRIGQTRDVLVYRLITCGTVEEKIYARQIFKDSIIKQTTGNVADPTRYFTRSQLRD 534
Query: 826 LLSL--PKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFL-DTLGIAGVSHHSLLFSKT 882
L L P + S TQ QL + H + + +E H FL T + GVSHH L+FS
Sbjct: 535 LFVLNDPLR----SETQVQLEQMHTKL--LSKEIEIHKSFLMSTNMVFGVSHHDLMFS-- 586
Query: 883 ARVQVVQEEEEATRRKGTAFVGNSSSSYLVARNVDG 918
+EE+E + F+ + V R D
Sbjct: 587 -----TEEEKEDVSEQQREFITHQVQRARVLREKDA 617
>gi|315439410|gb|ADU19844.1| excision repair cross-complementing rodent repair deficiency
complementation group 6-like protein [Cervus hortulorum]
Length = 1243
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 275/745 (36%), Positives = 425/745 (57%), Gaps = 80/745 (10%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGK-GGILGDDMGLGKTMQICGFLAGLFHSR 350
S +L ++ N L+ +Q+EG+ +L++L+ G+ GGIL DDMGLGKT+QI FL+G+F +
Sbjct: 84 SGLLLYQELHNQLYEYQKEGVAFLYTLYRDGRRGGILADDMGLGKTVQIIAFLSGMFDAS 143
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L L++ P +L+S W++E +++ + G R L + Q GV++TTY
Sbjct: 144 LGNHVLLIMPTSLISIWLREFVKWTPGMRVKTFLGPSKDERTKNLCRIQQRNGVIITTYH 203
Query: 411 IVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
++ NN + SL G F+ WDY+ILDE H IK ST+ A + + + I
Sbjct: 204 MLINNWQHLSSLNGQEFL----------WDYVILDEAHKIKTSSTKSAVCARALSAGNPI 253
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+++G+PI N L+ELW+LF+F G + FK +YE PI R +K A EK +G +
Sbjct: 254 LLTGSPIHNILQELWSLFDFAVKGSCYGTLRTFKMEYENPITRAREKDATPGEKALGFKI 313
Query: 527 AKELRERIQPYFLRRLKNEVFHEDD----------------VTSSATLSKKNEMIVWLRL 570
++ L I+PYFLRR K EV + + +LS+KN++I+W+RL
Sbjct: 314 SENLMAIIKPYFLRRTKEEVQKKRSSNPEVQLSEKRPDVGAICEMPSLSRKNDLIIWIRL 373
Query: 571 TSCQRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
Q ++Y F++ + + L SPLA L++LKK+CDHP LL+ RA +L
Sbjct: 374 VPLQEEIYRKFVSLDHIKELLMETRSPLAELSVLKKLCDHPRLLSARAC--------GLL 425
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLIFS 684
N A L+ + + D ++ D + D+ S K+ F++ LL +L EGH L+FS
Sbjct: 426 NLGAAKLSVQDEIEGEDSSDVDHIDQISDDTLMEESGKMVFLMDLLKELRDEGHQTLVFS 485
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
Q+R++LN+I+ + ++ +K LRIDGT T +R K ++ FQ+ +FLLT+QVGG+GL
Sbjct: 486 QSRRILNIIERLLKNRHFKILRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGVGL 545
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
TLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK
Sbjct: 546 TLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDS 605
Query: 804 LFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQ 862
L + T + K RYFS+Q+LREL ++ + F S TQ QL H Q D++L+ HI
Sbjct: 606 LIRQTTGDKKNPFRYFSKQELRELFTV--EDFQNSATQLQLQSLHAAQRRSDKNLDEHIA 663
Query: 863 FLDTLGIAGVSHHSLLF----SKTARVQVVQEEEEATRRKGTA-FVGNSSSS---YLVAR 914
FL +L IAG+S H L++ S + V+++ +R A F+ S S L+ R
Sbjct: 664 FLHSLRIAGISDHDLMYTHDLSFKEELDVIEDSHYIQQRVQKAQFLVESESQNTELLMER 723
Query: 915 NVDGAE--------YAFNPRDIKLNKKSSSPKNEAKLKESDIKERIKRLSQLISNKVTVE 966
G+E + + ++NK P + + + +E +S L+++ V ++
Sbjct: 724 QKPGSEGIWLREPVFQTKKKRAEVNKPQPQPSSRLPIYHTQEEE----ISSLMAS-VIID 778
Query: 967 RLPDKGTKLQKQIAELNSELNKIKM 991
LP +G K +L++IKM
Sbjct: 779 DLPKEGEK----------DLSRIKM 793
>gi|145345466|ref|XP_001417230.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577457|gb|ABO95523.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 898
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/650 (38%), Positives = 359/650 (55%), Gaps = 60/650 (9%)
Query: 289 GPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH 348
GP+ + L + + L+ HQR+G+RW+W LH G+GGIL DDMGLGKT+Q C F+AGL
Sbjct: 74 GPK--FELDAALASRLYDHQRDGVRWMWGLHLAGRGGILADDMGLGKTLQACAFVAGLLR 131
Query: 349 SRLIKRALVVAPKTLLSHWIKELTAVGL--SAKIREYFGTCVKTRQYELQYVLQDKGVLL 406
S KR LV+AP TLL HW+KEL GL + +Y+G +L+ +G LL
Sbjct: 132 SGAAKRVLVLAPTTLLPHWLKELETCGLRRGETVFKYYGGSRGALDKQLRACATGRGALL 191
Query: 407 TTYDIVRNNSKSLRGSSFISDEAGDDDAI---------------WDYMILDEGHLIKNPS 451
+Y +V + + L G+ DEA A WD++++DEGH +KN +
Sbjct: 192 ASYGMVTSRASEL-GAPSDEDEAERASAREGRGVAPKDFAGEFRWDWIVMDEGHALKNAT 250
Query: 452 TQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGN 511
T+ A+ + ++P+ R+I++GTP+QN L ELW+L++ CP LLG F+ ++ I G
Sbjct: 251 TRLAQKVRQLPANLRMIVTGTPVQNALGELWSLYDLTCPGLLGGENEFRRRFANKIAAGQ 310
Query: 512 DKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVF-HEDDV----------TSSAT--- 557
A +++ + LR+ +PYFLRR K EV ++DV +++AT
Sbjct: 311 AASATQKQRSESKELTATLRQMTRPYFLRRDKKEVLLAKEDVAPVDDAKKPNSAAATSWK 370
Query: 558 --------LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD--GSPLAALTILKKICD 607
L +KN+ I W+ L Q LY FL S+ V A + GS ++ + LK+ICD
Sbjct: 371 HVKNAPSALGQKNDFIAWIPLEPAQSALYSKFLASKPVQDAINKTGSAISCMNALKRICD 430
Query: 608 HPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE---------------KDDF 652
HP L + +D E+ E + + E D
Sbjct: 431 HPTLCVAARDDADVDASPPAEEEEEIEDEEDAELKKSCAGEAAAAAAAAVRECDFDADAL 490
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
++S K F++++LD+ EG L+FSQ++ LN+++ I KF+RIDG
Sbjct: 491 ARGASSLSAKSRFLMAMLDRFRAEGRRTLVFSQSQATLNVVEACIREANIKFVRIDGKVN 550
Query: 713 ASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYR 772
+R + V F+ P+ LLT++VGGLGLTLT+A RVI+ DPAWNP+TDNQSVDRAYR
Sbjct: 551 VDERDRRVTQFRSNADIPVMLLTARVGGLGLTLTEATRVIIYDPAWNPTTDNQSVDRAYR 610
Query: 773 IGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQ 832
IGQ KDVVVYRL+TCGTVEEKIYR+Q+FKGG+ K+AT+ +YF D +L +
Sbjct: 611 IGQTKDVVVYRLVTCGTVEEKIYRRQVFKGGVSKSATDGVSGKQYFGADDATQLFETREN 670
Query: 833 GFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLG-IAGVSHHSLLFSK 881
S T +QL+ H + L A + ++++L + GVS H LLFSK
Sbjct: 671 AMRASDTMKQLNALHAADRKWTDELRAELPYVESLPFVCGVSDHDLLFSK 720
>gi|320170477|gb|EFW47376.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 1345
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 259/630 (41%), Positives = 366/630 (58%), Gaps = 51/630 (8%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P +FPHQREG+ WL+SL + GGILGDDMGLGKT+QI FL GLF S+ IK
Sbjct: 226 FFVPHATVERMFPHQREGVIWLYSLFQRKTGGILGDDMGLGKTIQIVSFLQGLFCSKQIK 285
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVR 413
RAL+V P LL +W KE + ++ +K R L+ + + GV LTTY IV
Sbjct: 286 RALIVVPLALLDNWKKEFEKWAPEVAVWQFHDGDLKQRHQVLRSLRKRGGVCLTTYGIVC 345
Query: 414 NNSKSLR-------GSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHR 466
+ + LR G S SD D +WD MILDEGH IKN +T+ A+++ I + +
Sbjct: 346 SRNDGLRTIDERVDGGSAQSD----DSTVWDCMILDEGHRIKNCNTKLARAVYNIMATTK 401
Query: 467 IIISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSA 525
+I+SGTPIQNNLKE+WALFNF C +LLG + F + + PI++ +DK A D E+ G+
Sbjct: 402 VILSGTPIQNNLKEMWALFNFVCDGKLLGTIQSFGKLFNQPIVQASDKSATDAERLQGAT 461
Query: 526 VAKELRERIQPYFLRRLKNEVFHEDDVTS----------------SATLSKKNEMIVWLR 569
VA LR+RI PYFLRR K +V H DD T + L +K+++IVWL+
Sbjct: 462 VAAVLRDRIAPYFLRREKKQVLHADDGTVFAAQAAADLADAPGTIAIKLERKDDLIVWLK 521
Query: 570 LTSCQRQLYEAFL-NSEIVLSAFDGSP-LAALTILKKICDHPLLL----TKRAAEDV--- 620
L Q +LY AFL N++I +GS L+AL +LKK+CDHP LL K +D+
Sbjct: 522 LAQPQLKLYTAFLENTDIDELINEGSTVLSALVMLKKLCDHPQLLKLTTNKSDTKDLRIL 581
Query: 621 -------LDGMDSMLNPEDAALAEKLAMHIADVAEK---DDFQEQHDNI--SCKISFILS 668
D + A A+ A+ + + + ++ D I S K+SF+ +
Sbjct: 582 AAKKCDDDDEDEERQQERQTARAKLTALEVKKLWQSFLPRTAEQIEDTIQASVKLSFLTT 641
Query: 669 LLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDV 728
L + L +GH VLIFSQ+ +ML+LIQE + + Y +RIDG+ +R ++ F D
Sbjct: 642 LCENLKQDGHRVLIFSQSTRMLDLIQEVLTYQKYSLIRIDGSVTGHERQHRIDKFNTDDS 701
Query: 729 APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCG 788
FLLT+QVGG+G+TLT ADRVI+VDP+WNP+ D Q+VDRAYRIGQ ++VV+YRL+TCG
Sbjct: 702 IFGFLLTTQVGGVGITLTSADRVIIVDPSWNPAIDTQAVDRAYRIGQTRNVVIYRLITCG 761
Query: 789 TVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHG 848
T+EEKIY +Q++K + R+F +L +L + + F S TQ++L ++
Sbjct: 762 TIEEKIYCRQVYKSDFSHVMIDKHAPSRHFDASELYQLFEIGETSF--STTQKELSAKYD 819
Query: 849 DQHNMDESLEAHIQFLDTLGIAGVSHHSLL 878
+ L H L L + G + H LL
Sbjct: 820 GAKIIPPWLADHFATLKRLDVRGTNFHDLL 849
>gi|119592219|gb|EAW71813.1| FLJ20105 protein, isoform CRA_a [Homo sapiens]
Length = 1127
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/586 (41%), Positives = 354/586 (60%), Gaps = 66/586 (11%)
Query: 331 MGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKT 390
MGLGKT+QI FL+G+F + L+ L++ P L++ W+KE +++ + G
Sbjct: 1 MGLGKTVQIIAFLSGMFDASLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDE 60
Query: 391 RQYELQYVLQDKGVLLTTYDIVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLI 447
R L + Q GV++TTY ++ NN + S RG F+ WDY+ILDE H I
Sbjct: 61 RTRNLNRIQQRNGVIITTYQMLINNWQQLSSFRGQEFV----------WDYVILDEAHKI 110
Query: 448 KNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELP 506
K ST+ A IP+++R++++GTPIQNNL+ELW+LF+F C LLG K FK +YE P
Sbjct: 111 KTSSTKSAICARAIPASNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENP 170
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHE----------------D 550
I R +K A EK +G +++ L I+PYFLRR K +V + D
Sbjct: 171 ITRAREKDATPGEKALGFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVD 230
Query: 551 DVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKIC 606
+ +LS+KN++I+W+RL Q ++Y F++ E+++ SPLA L +LKK+C
Sbjct: 231 AICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLC 288
Query: 607 DHPLLLTKRA----------AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQH 656
DHP LL+ RA A+D +G DS P+ HI V + +E
Sbjct: 289 DHPRLLSARACCLLNLGTFSAQDGNEGEDS---PD--------VDHIDQVTDDTLMEE-- 335
Query: 657 DNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASD 715
S K+ F++ LL +L EGH L+FSQ+R++LN+I+ + ++ +K LRIDGT T +
Sbjct: 336 ---SGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLE 392
Query: 716 RVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ 775
R K +N FQ+ +FLLT+QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQ
Sbjct: 393 REKRINLFQQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQ 452
Query: 776 KKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGF 834
K++VVVYRL+TCGTVEEKIYR+Q+FK L + T E K RYFS+Q+LREL ++ +
Sbjct: 453 KENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDL 510
Query: 835 DVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFS 880
S+TQ QL H Q D L+ HI +L +LGIAG+S H L+++
Sbjct: 511 QNSVTQLQLQSLHAAQRKSDIKLDEHIAYLQSLGIAGISDHDLMYT 556
>gi|198434690|ref|XP_002126745.1| PREDICTED: similar to DNA excision repair protein ERCC-6-like
(ATP-dependent helicase ERCC6-like) (PLK1-interacting
checkpoint helicase) (Tumor antigen BJ-HCC-15) [Ciona
intestinalis]
Length = 1159
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 257/613 (41%), Positives = 372/613 (60%), Gaps = 47/613 (7%)
Query: 299 KIGNMLFPHQREGLRWLWSL-HCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALV 357
K+ L+PHQ EG++W++ L + KGGIL DDMGLGKT+Q+ ++ LF ++LIK L+
Sbjct: 97 KLVERLYPHQIEGIKWMYDLFQNKRKGGILADDMGLGKTIQVIALISALFDAKLIKHVLL 156
Query: 358 VAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSK 417
V P +L+ +W E K+ EY G K R+ LQ + + V +TTY ++ +
Sbjct: 157 VLPLSLIPNWTNEFANWAPGIKVEEYHGPVAK-RKAILQQCMHRRSVCITTYGLIVTKWE 215
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
+L G + E +WDY+ILDEGH IKN S + K L +IPS +RII++GTP+QN
Sbjct: 216 TL-GETLDGREF-----VWDYIILDEGHRIKNAS-KTTKGLHKIPSRNRIILTGTPVQNK 268
Query: 478 LKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQP 536
++++WAL ++ LLG K FK YE+PI K A + R+G+ +++ LR+ P
Sbjct: 269 VRDMWALMDWVTQGSLLGTQKTFKSSYEIPIECARQKGATSGQIRLGNMMSESLRKLTDP 328
Query: 537 YFLRRLKNEVFHED----------DVTSSAT----------LSKKNEMIVWLRLTSCQRQ 576
+ LRR K+ + + D T LS KN+ +VW+ L+ Q+Q
Sbjct: 329 FILRRTKDGLTRNEKENRGNLACVDGAQDPTVLNKQPRFPKLSTKNDFVVWVYLSDIQQQ 388
Query: 577 LYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDV-LDGMDSML-NPED 632
+Y F+ + V L SPL LT+LKKICDHP LL+ +A ++ L+ DSM N +
Sbjct: 389 IYSDFIQLDSVKELLLTHRSPLVHLTVLKKICDHPRLLSTKACIELGLESNDSMTENLDQ 448
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNL 692
A+ A I +++++ +E S K+ F++ LL +L EGH LIFS +RKMLN+
Sbjct: 449 EAIEGCAANRINNISDQVLMEE-----SGKLQFLIPLLLRLREEGHRTLIFSMSRKMLNI 503
Query: 693 IQESIGSKGYKFLRIDG-TTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
IQ + + +K +R+DG TK S+R K V FQE +FLLT+QVGG+GLTLT ADRV
Sbjct: 504 IQRILMNLKFKVMRMDGLVTKLSEREKRVKLFQEDSSYSVFLLTTQVGGVGLTLTAADRV 563
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT-E 810
++ DP+WNP+TD+Q+VDR YRIGQKK V VYRL+TCG+VEEKIYR+QIFK + + +T +
Sbjct: 564 VIYDPSWNPATDSQAVDRIYRIGQKKSVAVYRLITCGSVEEKIYRRQIFKNSVIQQSTGQ 623
Query: 811 HKEQIRYFSQQDLRELLSLPKQGFDV--SLTQQQLHEEHGDQHNMDESLEAHIQFLDTLG 868
+ RYFS+Q+L EL L DV S TQ QL + H Q +D+ L+ H+ +L L
Sbjct: 624 CDDPYRYFSKQELAELFQLD----DVLSSSTQIQLSQLHSHQRKLDDHLQEHMDYLHELK 679
Query: 869 IAGVSHHSLLFSK 881
+ GVS H L+FS+
Sbjct: 680 MFGVSDHDLMFSQ 692
>gi|119592220|gb|EAW71814.1| FLJ20105 protein, isoform CRA_b [Homo sapiens]
Length = 1080
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/560 (42%), Positives = 341/560 (60%), Gaps = 61/560 (10%)
Query: 331 MGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKT 390
MGLGKT+QI FL+G+F + L+ L++ P L++ W+KE +++ + G
Sbjct: 1 MGLGKTVQIIAFLSGMFDASLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDE 60
Query: 391 RQYELQYVLQDKGVLLTTYDIVRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLI 447
R L + Q GV++TTY ++ NN + S RG F+ WDY+ILDE H I
Sbjct: 61 RTRNLNRIQQRNGVIITTYQMLINNWQQLSSFRGQEFV----------WDYVILDEAHKI 110
Query: 448 KNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELP 506
K ST+ A IP+++R++++GTPIQNNL+ELW+LF+F C LLG K FK +YE P
Sbjct: 111 KTSSTKSAICARAIPASNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENP 170
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
I R +K A EK +G +++ L I+PYFLRR K +V + KKN++I+
Sbjct: 171 ITRAREKDATPGEKALGFKISENLMAIIKPYFLRRTKEDVQKK----------KKNDLII 220
Query: 567 WLRLTSCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLD 622
W+RL Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA D
Sbjct: 221 WIRLVPLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARAYVD--- 275
Query: 623 GMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLI 682
HI V + +E S K+ F++ LL +L EGH L+
Sbjct: 276 -------------------HIDQVTDDTLMEE-----SGKMIFLMDLLKRLRDEGHQTLV 311
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT+QVGG+
Sbjct: 312 FSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGV 371
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR+Q+FK
Sbjct: 372 GLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFK 431
Query: 802 GGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAH 860
L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D L+ H
Sbjct: 432 DSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSDIKLDEH 489
Query: 861 IQFLDTLGIAGVSHHSLLFS 880
I +L +LGIAG+S H L+++
Sbjct: 490 IAYLQSLGIAGISDHDLMYT 509
>gi|405973253|gb|EKC37977.1| DNA excision repair protein ERCC-6-like protein [Crassostrea gigas]
Length = 1838
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/534 (44%), Positives = 341/534 (63%), Gaps = 45/534 (8%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTL 363
L+ HQ++G+ W+W LH + KGGILGDDMGLGKT+Q+ FL+GLF + L+V P ++
Sbjct: 577 LYAHQKQGVLWMWGLHQKRKGGILGDDMGLGKTIQVISFLSGLFDMEKVHSVLIVMPVSV 636
Query: 364 LSHWIKELT---------AVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
+ +W KE A G+ K+ Y G+ K ++ L + + GVLLT+Y +V
Sbjct: 637 IGNWEKEFGKWYGFYDTGAPGI--KVESYHGS-KKEKERSLAKIRRKGGVLLTSYGLV-- 691
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+ +S + G WDY+ILDEGH IKNP T+ K + +IP+ HRI+++GTPI
Sbjct: 692 ----VTSWEMMSQQDGRP-FRWDYLILDEGHKIKNP-TKTTKGVHQIPAGHRILLTGTPI 745
Query: 475 QNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRER 533
QNNL+E+W+LF+F LLG + FK +YE PI R ++ A E+R+G +A+ L++
Sbjct: 746 QNNLREMWSLFDFVHQGTLLGTARTFKMEYENPITRARERDATANERRLGMEMAESLKQI 805
Query: 534 IQPYFLRRLKNEVF----HEDDVTSSAT-------LSKKNEMIVWLRLTSCQRQLYEAFL 582
I PYFLRR K EV E +SS+T +++KN+ I+WL LT Q+++Y FL
Sbjct: 806 ISPYFLRRTKAEVTDNEAREGQNSSSSTRTLKMPTMTRKNDFIIWLFLTPDQQRIYGDFL 865
Query: 583 NSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
+ + V L SPL ALT+LKKICDHP LL++RA + G+D D+AL +
Sbjct: 866 SLDTVKELLMTKKSPLVALTVLKKICDHPRLLSRRACAQL--GLDGEHGLNDSALESEEG 923
Query: 641 MHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQES 696
A + + DN+ S K+ I+ LLD++ +GH L+FSQ+RKML++I +
Sbjct: 924 YQCA----ANQIKNMPDNVLIQESGKLIVIMDLLDQMKRDGHRCLVFSQSRKMLDIIHQL 979
Query: 697 IGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVD 755
I ++G+K +R+DGT T+ S+R K + FQE +FLLT+QVGG+GLTLT ADRVI+ D
Sbjct: 980 ITNRGHKVMRLDGTITQLSERDKRIATFQEDMSYSVFLLTTQVGGVGLTLTAADRVIIYD 1039
Query: 756 PAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
P+WNP+TD Q+VDR +RIGQ K+VV+YRL+TCGTVEEKIYR+QIFK + + T
Sbjct: 1040 PSWNPATDAQAVDRVFRIGQDKNVVIYRLITCGTVEEKIYRRQIFKDSITRQTT 1093
>gi|449670505|ref|XP_002157301.2| PREDICTED: DNA excision repair protein ERCC-6-like, partial [Hydra
magnipapillata]
Length = 662
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 258/639 (40%), Positives = 389/639 (60%), Gaps = 46/639 (7%)
Query: 254 RDGKLNKSA--HSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREG 311
RDG N + +S L+ +++ S D EG + ++L I N L+ +Q+EG
Sbjct: 41 RDGASNMTGCKNSELMLNMENSSHDE--NQEGDSDMIDLGENFLLHQSIANQLYSYQKEG 98
Query: 312 LRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKEL 371
+ W W L+ + KGGILGDDMGLGKT+Q+ FLAG+F + LI + L+VAP +L +W KEL
Sbjct: 99 VLWFWKLYKKKKGGILGDDMGLGKTIQVIAFLAGMFDAELIHKILIVAPVAVLVNWEKEL 158
Query: 372 TAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGD 431
+++ + G+ +R LQ V Q GVLLTTY ++ +N +S F D+ G+
Sbjct: 159 HKWAPGIRVKTFHGSTKLSRLRNLQKVQQSDGVLLTTYGMIVSNYES-----FGRDQNGE 213
Query: 432 DDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCP- 490
+ +WDY+ILDEGH IKNP + +K + +P+ ++ I++GTP+QNNL ELWALF++
Sbjct: 214 E-FVWDYIILDEGHKIKNPC-KTSKCVRMVPAKYQYILTGTPVQNNLSELWALFDYTQKG 271
Query: 491 ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHED 550
LLG K FK ++E PI++ +K A ++ G+ ++ +LRE I P+FLRR K+E+F ++
Sbjct: 272 TLLGTEKTFKMEFENPIIKAREKGATPYQQDYGNQLSIKLREIIAPFFLRRTKDEIFSKN 331
Query: 551 DVTSSAT-------LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTI 601
V T SKK +++VW+ L+ Q++LY F+ SE V SPLA L +
Sbjct: 332 IVQQKETEKNLNRLKSKKYDLVVWVYLSELQQKLYHGFIQSERVKQTLMSTRSPLAELQL 391
Query: 602 LKKICDHPLL---LTK--RAAED----VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
LKKI DHP L L+K +E+ ++ G++ + K+ + D++ +
Sbjct: 392 LKKISDHPRLQSTLSKLLTGSEEHETRLILGINDETEDDLDEEENKVNERVDDLSVESLI 451
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
++ S K+ F++ L+D L E H +IFSQ+ KML++IQ+ + G+ LR+DG K
Sbjct: 452 KD-----SGKMVFLVYLMDNLKAENHRTVIFSQSIKMLDIIQKVLSELGHLILRVDGRMK 506
Query: 713 -ASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
DR +++ F+E + L+T+Q+G +G+TLT A+R+++ DP+WNP TD Q+VDR Y
Sbjct: 507 NPQDRENVLDKFKEDLRYNVLLMTTQIGSVGITLTCANRLVIFDPSWNPGTDAQAVDRVY 566
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQ-IRYFSQQDLRELLSL- 829
RIGQ+KDVVVYRL+TCG+VEEKIYRKQIFK + K T + RYF+ +LREL SL
Sbjct: 567 RIGQEKDVVVYRLVTCGSVEEKIYRKQIFKNAIMKQTTGASDNPYRYFTNLELRELFSLD 626
Query: 830 -PKQGFDVSLTQQQLHEEHGDQHNMDESL--EAHIQFLD 865
P+ +S TQ QL E H + ES+ E H+QFL+
Sbjct: 627 NPR----ISTTQIQLQEMH-PYRKVSESIEFERHLQFLN 660
>gi|449493369|ref|XP_004159269.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis
sativus]
Length = 565
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 252/494 (51%), Positives = 310/494 (62%), Gaps = 48/494 (9%)
Query: 12 DGPKFSDITVFDSPPKAKTVSENDNYKGGNEIRDILNDLSARLEILSIDKRR-VPKTVDP 70
+ P FS IT FDSP + + G+EIRDILNDLSARLE+LS++KRR PK VD
Sbjct: 73 NAPNFSGITDFDSPSPPPPLPVENRVNKGSEIRDILNDLSARLELLSVEKRREKPKKVDS 132
Query: 71 EDDFSRLVKNGDTGQGSKGNLPEYASAESSFSLTSDLSDSSSGVTKD----NVGGVVESV 126
+DFS + +K + E S + S ++ L S V K NVGG
Sbjct: 133 IEDFSASYGGKGNEEANKADDREVESLKFSTKPSNSLLGESVKVEKAVKTLNVGG----- 187
Query: 127 ADEYEESKGDDVADEEQETENVGIGLKRNEPRWVDNNLVSARESFESNLDGEEDGGSLSE 186
+ EY G+++ + + + G+ + VD ++S
Sbjct: 188 SGEY----GEEILPNKVKVDVFDEGIHK-----VD---TCGKDS---------------- 219
Query: 187 VEGDEHLSRVHETKKHHQRQKKNEPKRVHDGERFNGQSFVSGGREEYDDEDDCVIVSGKL 246
E L + KH + + K + V G+S V E +DEDDCV+++ +
Sbjct: 220 ----EQLLNLEHGNKHDKGRDKCRSQDVQKTYNSLGKSPVLIDEGEVEDEDDCVVLNHET 275
Query: 247 V-VNRPDRRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLF 305
N R+DGK + G + LD +D +LE + S +G ST+ L G+I ML+
Sbjct: 276 RDFNEVRRQDGKYEEK--DGGSDGLDKSCEDFILEGKSS---AGRNSTFKLQGRIATMLY 330
Query: 306 PHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLS 365
PHQR+GL+WLWSLHC GKGGILGDDMGLGKTMQICGFLAGLF+SRLIKR LVVAPKTLL
Sbjct: 331 PHQRDGLQWLWSLHCLGKGGILGDDMGLGKTMQICGFLAGLFYSRLIKRVLVVAPKTLLP 390
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
HWIKEL+ VGLS K REY+GT K RQYEL Y+LQDKGVLLTTYDIVRNNSKSL+G+ F
Sbjct: 391 HWIKELSVVGLSEKTREYYGTSAKLRQYELNYILQDKGVLLTTYDIVRNNSKSLQGNCFS 450
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALF 485
DE +D WDYMILDEGHLIKNPSTQRAKSLL+IPSAHRIIISGTP+QNNLKELWALF
Sbjct: 451 EDEETEDGTTWDYMILDEGHLIKNPSTQRAKSLLDIPSAHRIIISGTPLQNNLKELWALF 510
Query: 486 NFCCPELLGDNKWF 499
NFCCP+LLGD W+
Sbjct: 511 NFCCPDLLGDKHWY 524
>gi|22760345|dbj|BAC11160.1| unnamed protein product [Homo sapiens]
Length = 1106
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/565 (41%), Positives = 336/565 (59%), Gaps = 66/565 (11%)
Query: 352 IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDI 411
+ L++ P L++ W+KE ++ + G R L + Q GV++TTY +
Sbjct: 1 MNHVLLIMPTNLINTWVKEFIKWTPGMGVKTFHGPSKDERTRNLNRIQQRNGVIITTYQM 60
Query: 412 VRNNSK---SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRII 468
+ NN + S RG F+ WDY+ILDE H IK ST+ A IP+++R++
Sbjct: 61 LINNWQQLSSFRGQEFV----------WDYVILDEAHKIKTSSTKSAICARAIPASNRLL 110
Query: 469 ISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
++GTPIQNNL+ELW+LF+F C LLG K FK +YE PI R +K A EK +G ++
Sbjct: 111 LTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKIS 170
Query: 528 KELRERIQPYFLRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRLT 571
+ L I+PYFLRR K +V + D + +LS+KN++I+W+RL
Sbjct: 171 ENLMAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLIIWIRLV 230
Query: 572 SCQRQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRA----------A 617
Q ++Y F++ E+++ SPLA L +LKK+CDHP LL+ RA A
Sbjct: 231 PLQEEIYRKFVSLDHIKELLMET--RSPLAELGVLKKLCDHPRLLSARACCLLNLGTFSA 288
Query: 618 EDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
+D +G DS P+ HI V + +E S K+ F++ LL +L EG
Sbjct: 289 QDGNEGEDS---PD--------VDHIDQVTDDTLMEE-----SGKMIFLMDLLKRLRDEG 332
Query: 678 HNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTS 736
H L+FSQ+R++LN+I+ + ++ +K LRIDGT T +R K +N FQ+ +FLLT+
Sbjct: 333 HQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTT 392
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
QVGG+GLTLT A RV++ DP+WNP+TD Q+VDR YRIGQK++VVVYRL+TCGTVEEKIYR
Sbjct: 393 QVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYR 452
Query: 797 KQIFKGGLFKTAT-EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDE 855
+Q+FK L + T E K RYFS+Q+LREL ++ + S+TQ QL H Q D
Sbjct: 453 RQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTI--EDLQNSVTQLQLQSLHAAQRKSDI 510
Query: 856 SLEAHIQFLDTLGIAGVSHHSLLFS 880
L+ HI +L +LGIAG+S H L+++
Sbjct: 511 KLDEHIAYLQSLGIAGISDHDLMYT 535
>gi|222618922|gb|EEE55054.1| hypothetical protein OsJ_02753 [Oryza sativa Japonica Group]
Length = 755
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/558 (40%), Positives = 314/558 (56%), Gaps = 95/558 (17%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQ-GKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
++LP +I + LFPHQ++GL WLW LHC+ GGIL DDMGLGKT Q FLAGLF+S L
Sbjct: 196 FLLPSEIFSSLFPHQKDGLEWLWRLHCEKSGGGILADDMGLGKTRQASAFLAGLFYSDLT 255
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIV 412
+R L+VAP T+L WI ELT VG + + F C KTR L VL++ GVLL TYD+V
Sbjct: 256 QRVLIVAPGTILHQWIAELTKVGFNEDLIHSFW-CAKTRHDSLAQVLKEGGVLLITYDLV 314
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGT 472
R ++ L G S S + WDY+ILDEGH++KNP+T+ A +L + ++++GT
Sbjct: 315 RLYNEELNGMSSKSSKMRRACPSWDYVILDEGHVLKNPNTKNAAALKSLSRGQTVVLTGT 374
Query: 473 PIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
P+QNNL E R+
Sbjct: 375 PVQNNLSE-------------------------------------------------FRK 385
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD 592
++PYFLRR K + + L K ++++WL+LT Q
Sbjct: 386 MVRPYFLRRTKESI--------ESLLPNKADLVIWLKLTPYQ------------------ 419
Query: 593 GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
+L+KIC+HP LT +D + L ++ + + + + K+
Sbjct: 420 --------LLQKICNHPQNLT------AVDSCEEQLALKENRTLQGIVKKLEALIAKNTT 465
Query: 653 QEQHDNISCKISFILSLL----DKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRID 708
+ + SCK++FIL LL +KL EGH VLIFSQTR ML+ I+E++ +KG F R+D
Sbjct: 466 KTSNCLKSCKLTFILQLLKTWQEKLKEEGHKVLIFSQTRLMLDEIEEALTNKGVHFARMD 525
Query: 709 GTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
GT AS R I+ FQ D PIFL+T++VGG+GL LT A RVI+ DP+WNPS DNQ VD
Sbjct: 526 GTVTASKREAIIKGFQSKDGPPIFLMTTKVGGIGLNLTNASRVIIADPSWNPSLDNQCVD 585
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLS 828
R YRIGQ+K+V++YRL+T T+EE+IY KQ+ K G+FK ATE ++ RY ++ +E L
Sbjct: 586 RVYRIGQEKNVIIYRLITSCTIEERIYEKQVSKEGIFKAATEERDFRRYINKLGYKEFLK 645
Query: 829 LPKQGFDVSLTQQQLHEE 846
LP+ GF SL Q++L E
Sbjct: 646 LPEMGFGTSLLQKRLEIE 663
>gi|290980924|ref|XP_002673181.1| predicted protein [Naegleria gruberi]
gi|284086763|gb|EFC40437.1| predicted protein [Naegleria gruberi]
Length = 1101
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 246/617 (39%), Positives = 340/617 (55%), Gaps = 65/617 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGK----GGILGDDMGLGKTMQICGFLAGLFHS 349
+ L KI N L+ +Q+EGL W W H + GGIL DDMGLGKT FL+GLF
Sbjct: 225 FKLSSKIYNQLYDYQKEGLLWYWGKHISIRNDISGGILADDMGLGKTATTISFLSGLFSG 284
Query: 350 RLIKRALVVAPKTLLSHWIKELTAVGLS-AKIREYFGTCVKTRQYELQYVLQDKGVLLTT 408
+K L+ P +L+ +W KE I + K R L Q+ GVLLTT
Sbjct: 285 DSVKHVLIAMPVSLVENWRKEFNVWSEGDFNIFIFHSLTKKQRTDILDQYKQEGGVLLTT 344
Query: 409 YDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH-RI 467
Y + + +D D +DY+ILDEGH +KNPST +K L ++PS RI
Sbjct: 345 YGTISSQI------DLFTDSYVKDGYQFDYIILDEGHKLKNPSTLLSKCLHKLPSTMCRI 398
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+ISGTP+QNNL E+ AL ++ LLGD K FK+++E I+R N+K A E+++G+ +
Sbjct: 399 VISGTPVQNNLMEMHALMDWIFKGTLLGDRKTFKDEFEKKIVRANEKDATSFEQKLGAEI 458
Query: 527 AKELRERIQPYFLRRLKNEVFHEDDVTSSATL------------SKKNEMIVWLRLTSCQ 574
+ RE I P+ LRR K++V + L SKKN++++W++ T+ Q
Sbjct: 459 LRRFREVISPHMLRREKSQVLQRIQPADANNLRKSIGGSLQKKISKKNDLVIWIKSTNYQ 518
Query: 575 RQLYEAFLNSEIVLSAF--DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
+LY FL SE V SPLAA+TILK+IC HP LL K + +
Sbjct: 519 LELYREFLKSEDVHEVIHESTSPLAAITILKQICCHPDLLPK-------------VQKKS 565
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNL 692
+ E +AM S K+ F+ L+ +L E LIFSQ+ KML++
Sbjct: 566 KNIKEMIAM------------------SGKMIFLRKLVQQLYEEDEKCLIFSQSSKMLDM 607
Query: 693 IQESIGSKGYKFLRIDGTTK-ASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADR 750
I + + RIDGT +R + V+ F E FLLTSQ G +GLTLT A R
Sbjct: 608 IASMLKYINISYTRIDGTINDTKERQRRVDSFNSENSPYFCFLLTSQTGSVGLTLTAATR 667
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE 810
VI+ DP+WNP+ DNQ+ DR YRIGQ KDVVVYRL++C T+EEK+YRKQ+FK +F++ TE
Sbjct: 668 VILFDPSWNPTQDNQAADRCYRIGQLKDVVVYRLISCSTIEEKVYRKQVFKDAIFRSTTE 727
Query: 811 HKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHN-MDESLEAHIQFLDTLG- 868
+ Q RYF++ +L+EL SLP Q + S TQ QL H N E L+ H++ + L
Sbjct: 728 KENQYRYFTKSELKELFSLP-QNPNASETQLQLENIHTPSPNHHSEKLKQHLETIKNLAK 786
Query: 869 --IAGVSHHSLLFSKTA 883
+ G S+H LL+SK A
Sbjct: 787 DVMTGFSNHDLLYSKEA 803
>gi|358339518|dbj|GAA29438.2| DNA excision repair protein ERCC-6-like, partial [Clonorchis
sinensis]
Length = 1661
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 259/691 (37%), Positives = 375/691 (54%), Gaps = 105/691 (15%)
Query: 268 NVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGIL 327
N + +DD V EG L PR+ Y L+ +Q++G++WLW LH + GGIL
Sbjct: 514 NQMGSRADDVVNVAEG---LRLPRALY-------EKLYEYQKDGVKWLWDLHTRAPGGIL 563
Query: 328 GDDMGLGKTMQICGFLAGLFHS---RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYF 384
DDMGLGKT+Q+ FL+GLF S RL AL++ P ++L W EL + ++ +
Sbjct: 564 ADDMGLGKTVQVIAFLSGLFISSSKRLT--ALILMPVSVLVTWEAELKRWAPALRVVVFH 621
Query: 385 GTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL-----RGSSFISDEAGD------DD 433
R L + ++ G++LTTY +V ++ L F+S + + +
Sbjct: 622 DGNRSQRLRSLSMIQRNGGIVLTTYGMVAAGAEDLIVDFHANPQFMSAKLSNLEGRMAPE 681
Query: 434 AIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPE-- 491
+WDY+ILDE H IKNPS + K++L I + HR++++GT +QNNL ELW+L+N C
Sbjct: 682 FVWDYLILDEAHKIKNPSAKTTKAVLSIAAEHRVLLTGTAVQNNLLELWSLYN--CTHSG 739
Query: 492 -LLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHED 550
LLG + FK +YE PI R +K A E+ G +A+ LR I PYFLRR K E+
Sbjct: 740 RLLGRMQTFKNEYEKPIKRAREKDASRAERAHGQLMAQSLRRIIDPYFLRRTKEEILPSG 799
Query: 551 D---------------VTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN----SEIVLSAF 591
VT + KK E+++W+ L Q + Y FL E+++
Sbjct: 800 VDKKASVSPADPDIGLVTPVEPMPKKTELVLWIYLREVQERSYRDFLELDQVKELLIGTT 859
Query: 592 DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA-EKLAMHIADVAEKD 650
SPL L ILKK+CDHP LL+ + LN E ++ E+ + H A +
Sbjct: 860 RRSPLMELLILKKLCDHPRLLSPHQC--------ASLNLEVTSVPDERYSKHSLPPASQL 911
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGH-------NVLIFSQTRKMLNLIQESIGS---- 699
QE S K++F+ L+ + E LIFSQ+ + L++ ++ I S
Sbjct: 912 -VQE-----SGKLTFLSLLMSSFLREKQPGSGTVPKTLIFSQSIRFLDMAEKVILSINNR 965
Query: 700 -------KGYKFLRIDG-TTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+G++ LR+DG TK +R+ ++ F+ + LLT+QVGG+GLTLT A RV
Sbjct: 966 PETTSQFRGHRVLRLDGRLTKVEERLDVIRLFERDPSYTVMLLTTQVGGVGLTLTAASRV 1025
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH 811
I++DP+WNP+TD Q+VDRAYRIGQK DV+VYRL+TCGTVEEKIYR+QIFK + + T
Sbjct: 1026 IILDPSWNPATDAQAVDRAYRIGQKSDVIVYRLLTCGTVEEKIYRRQIFKNSVIRQTTTT 1085
Query: 812 ------KEQIRYFSQQDLRELLSL--PKQGFDVSLTQQQLHEEHGDQHNM-DESLEAHIQ 862
++ RYF+ QDLREL SL P+ +S TQQQL H + DE++ H+
Sbjct: 1086 GQNKADQDPYRYFTNQDLRELFSLGDPR----ISTTQQQLAALHKEAEKWSDETIRPHLL 1141
Query: 863 FL------DTLGIAGVSHHSLLFSKTARVQV 887
+L DT + G+S H LLFS+ VQ
Sbjct: 1142 YLTGQDHKDT--VFGLSFHDLLFSRKEAVQC 1170
>gi|303276775|ref|XP_003057681.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226460338|gb|EEH57632.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 509
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/515 (41%), Positives = 300/515 (58%), Gaps = 43/515 (8%)
Query: 289 GPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH 348
GP+ + L G++ L+ HQR+G+RW+W+L +GGIL DDMGLGKT+Q+ F AGL
Sbjct: 9 GPK--FELAGELAARLYDHQRDGVRWMWNLQLNNRGGILADDMGLGKTLQVAAFAAGLLR 66
Query: 349 SRLIKRALVVAPKTLLSHWIKELTAVGL--SAKIREYFGTCVKT-RQYELQYVLQDKGVL 405
S+ KR LV+AP TLL HW KE GL + + G KT R L VL GVL
Sbjct: 67 SKAAKRVLVLAPTTLLPHWGKEFIVAGLKEGVNLHRFAGGGSKTDRDKALSKVLTHGGVL 126
Query: 406 LTTYDIVRNNSKSLRGSSFISDEA--GDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
LTTY +V +N+ RGS + G WD+++ DEGH +KNP+ Q + + IP+
Sbjct: 127 LTTYGMVTHNATG-RGSIVAGQDLPDGGTGLSWDWVVCDEGHKLKNPNAQLPRKIRTIPA 185
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
++R+II+GTPIQN+L ELWAL++ CCP LLGD F+ +Y I G + A R++ G
Sbjct: 186 SYRLIITGTPIQNHLAELWALYDLCCPGLLGDEVEFRREYSKKIGLGQSRDATQRQREAG 245
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT-------------------LSKKNEM 564
+ + ELR + +P+ LRR K+ V + + T L KN++
Sbjct: 246 ARASDELRTKCRPFMLRREKSSVLAKAAADEAGTTSGEESNETAAAAAHAPSQLGSKNDL 305
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLSAFD--GSPLAALTILKKICDHPLL---LTKRAAED 619
IVWL L QR+LY+ FL S V +A + GS L+A+ +LKKICDHP L +T +A D
Sbjct: 306 IVWLPLRPAQRRLYQQFLKSGPVRAALNKTGSALSAINVLKKICDHPALCCAITGASAAD 365
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
+P + K A D + S K +F++ +L L GH
Sbjct: 366 AAASSTFTRSPSKSPGGSKSADLGGD-----------PSASGKAAFLMDMLRHLASNGHR 414
Query: 680 VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
L+FSQ+R ML++++++ ++G+K +RIDG A +R V FQ P+ LLTSQVG
Sbjct: 415 TLVFSQSRAMLDVLEKAAAAEGHKLVRIDGNVPADERHARVERFQSDASIPLALLTSQVG 474
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIG 774
GLGLTLT ADRV++ DP+WNP++D+QSVDRAYRIG
Sbjct: 475 GLGLTLTAADRVVIYDPSWNPASDSQSVDRAYRIG 509
>gi|412985838|emb|CCO17038.1| predicted protein [Bathycoccus prasinos]
Length = 1063
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 244/680 (35%), Positives = 350/680 (51%), Gaps = 98/680 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ L + L+ HQR+ +RWLW L + +GGIL DDMGLGKTM F+AG S+ IK
Sbjct: 247 FSLDHSVAMKLYDHQRDAVRWLWDLQLKNRGGILADDMGLGKTMSSAAFIAGSLKSKTIK 306
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFG-TCVKTRQYELQYVLQDK----GVLLTT 408
RAL++AP TLL HW KE GL+ K RE F T K ++ ++ +Q + VLL T
Sbjct: 307 RALILAPTTLLPHWRKEFIVCGLNEK-REIFSYTGTKEQRAKVLKKVQSREGEGSVLLCT 365
Query: 409 YDIVRNNSKSL-----------------------RGSSFISDEAGDDDAIWDYMILDEGH 445
Y ++ +N + RG + D + ++++DEGH
Sbjct: 366 YGMLSHNPEEFGIVLENDEGTNYRQIEDIERREGRGFEVSAKSYSGDGVRFGWVVMDEGH 425
Query: 446 LIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYEL 505
+KNP+T+ A+ + +P R+++SGTPIQN+L ELWAL++ P LLG + F++ +
Sbjct: 426 QMKNPNTKIAQFVRRLPCDLRLVVSGTPIQNHLGELWALYDLAAPGLLGSEEQFRKNFAR 485
Query: 506 PILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHE---------------- 549
I G + A + E+ ++K LR+ PYFLRR K V +
Sbjct: 486 KITSGRSRDASESERHEARELSKMLRKMCAPYFLRREKEGVLRDGEPNKEKKDGVEKDKE 545
Query: 550 --DDVTSSAT-----------------LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
+ V+ +A L KKN+++ W+ L+ Q+ LYEAFL S +
Sbjct: 546 KNETVSEAAARAGNITKWASTHNAPKKLGKKNDLVAWIPLSKAQKTLYEAFLKSPTIQKV 605
Query: 591 FD--GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
+ GS LAAL+ LKKICD P L R E V D P + + + +VA
Sbjct: 606 LNKTGSALAALSALKKICDDPYLAF-RELESV--NADEREEPNEDTRSINTTDALREVAS 662
Query: 649 K-----DDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN---LIQESIGSK 700
D +E S K+ + +LL + G VL+FSQ+R L+ +I I
Sbjct: 663 SIGLDVDQLRENPLLFSAKLKRLHALLSEFKKNGKKVLVFSQSRYALDRCEVIARKIFDV 722
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
+ RIDG A+ R V FQE G + LLT++VGGLG+TLT A RVI+ DP+WN
Sbjct: 723 DNQVTRIDGNVSANVRHDRVTAFQESGSPNQLMLLTTRVGGLGITLTAATRVIIFDPSWN 782
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA----------- 808
P+TDNQSVDRAYRIGQ ++VVVYR++T GTVEEK YRKQ+FK G+ A
Sbjct: 783 PTTDNQSVDRAYRIGQTENVVVYRMITVGTVEEKTYRKQVFKQGIANDAQKGGGNEDFSP 842
Query: 809 -----TEHKEQIRYFS--QQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHI 861
E +++ RYFS + D + + + +VS T + L+ H DE L+ +
Sbjct: 843 SKESNNEEEDEFRYFSTAETDGNVMFTFDVKNSEVSSTAKTLNSLHAHHREYDEQLKREL 902
Query: 862 QFLDTLGIAGVSHHSLLFSK 881
+ T G+ VS H LLFS+
Sbjct: 903 E--STKGMFEVSDHDLLFSQ 920
>gi|327281442|ref|XP_003225457.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 1441
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/552 (38%), Positives = 317/552 (57%), Gaps = 56/552 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++
Sbjct: 476 FKVPGFLFKKLFKYQQTGVRWLWELHCQQVGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 535
Query: 354 R-----------ALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ 400
R +L+V P T++ W+KE + G+ +K + ++ +
Sbjct: 536 RGSNYRFTGLGPSLIVCPTTVMHQWVKEFHNWWPPFRVAVLHETGSYIKKKVKLIREIAA 595
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+L+T+Y VR +S+ + W Y+ILDEGH I+NP+ + +
Sbjct: 596 CNGILITSYSYVRLLQESIHRYN------------WHYVILDEGHKIRNPNAAVTLACKQ 643
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HRII+SG+PIQNNLKELW+LF+F P LG F E++ +PI G +A +
Sbjct: 644 FSTPHRIILSGSPIQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYCNASPVQV 703
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+K +V S +L KNE +++ RLT Q ++Y+
Sbjct: 704 KTAYKCACILRDTINPYLLRRMKA------NVKMSLSLPDKNEQVLFCRLTDEQHEVYKR 757
Query: 581 FLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGM-DSMLNPEDAALAE 637
F++S+ V +G + LT L+KIC+HP + + +L G+ D LN ED
Sbjct: 758 FIDSKEVYQILNGEMQIFSGLTALRKICNHPDIFS--GGPKILKGVPDEELNEED----- 810
Query: 638 KLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESI 697
H F ++ S K+ + SLL +GH VL+F+Q+R+ML++I+ +
Sbjct: 811 ----HFG-------FWKR----SGKMIVVESLLKIWYKQGHRVLLFTQSRQMLHIIEAFL 855
Query: 698 GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPA 757
+ Y ++++DGTT + R +++ F E IFLLT++VGGLG+ LT ADRVI+ DP
Sbjct: 856 KQRSYSYVKMDGTTTVASRQPLISRFNEDTSIFIFLLTTRVGGLGVNLTGADRVIIYDPD 915
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRY 817
WNPSTD Q+ +RA+RIGQ K+V VYRL+T GT+EEKIY +QIFK L + +Q R+
Sbjct: 916 WNPSTDTQARERAWRIGQTKEVTVYRLLTAGTIEEKIYHRQIFKQFLTNRILKDPKQRRF 975
Query: 818 FSQQDLRELLSL 829
F DL EL SL
Sbjct: 976 FKSNDLYELFSL 987
>gi|118092751|ref|XP_421656.2| PREDICTED: DNA excision repair protein ERCC-6 [Gallus gallus]
Length = 1495
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/551 (38%), Positives = 308/551 (55%), Gaps = 54/551 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++
Sbjct: 492 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 551
Query: 354 RA-----------LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ 400
R ++V P T++ W+KE I G+ + ++ +
Sbjct: 552 RGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKLIREIAS 611
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+L+T+Y +R + D D W Y+ILDEGH I+NP+ + +
Sbjct: 612 CHGILITSYSYIR----------LMQDNIHSYD--WHYVILDEGHKIRNPNAAVTLACKQ 659
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HRII+SG+P+QNNLKELW+LF+F P LG F E++ +PI G +A +
Sbjct: 660 FRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 719
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+K DV S +L KNE +++ RLT QRQ+Y+
Sbjct: 720 KTAYKCACVLRDAINPYLLRRMKA------DVKMSLSLPDKNEQVLFCRLTDEQRQVYQN 773
Query: 581 FLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
F++S+ V +G + L L+KIC+HP D+ G +L
Sbjct: 774 FIDSKEVYQILNGDMQVFSGLVALRKICNHP---------DLFSGGPKILK--------- 815
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
+ AD+ E D F + S K+ + SLL +GH VL F+Q+R+ML +++ +
Sbjct: 816 -CVPDADLEEADQFG--YWKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFLR 872
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
+ Y +LR+DGTT + R ++ + E IFLLT++VGG+G+ LT ADRVI+ DP W
Sbjct: 873 DRNYSYLRMDGTTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDW 932
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 933 NPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFF 992
Query: 819 SQQDLRELLSL 829
DL EL +L
Sbjct: 993 KSNDLYELFTL 1003
>gi|126272865|ref|XP_001366076.1| PREDICTED: DNA excision repair protein ERCC-6 [Monodelphis domestica]
Length = 1492
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/551 (38%), Positives = 316/551 (57%), Gaps = 54/551 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++
Sbjct: 491 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 550
Query: 354 RA-----------LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ 400
R ++V P T++ W++E I G+ + +Q + +
Sbjct: 551 RGSNYRFEGLGPTVIVCPTTVMHQWVREFHTWWPPFRVAILHETGSYTNKKVKLIQEIAR 610
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+L+T+Y +R + D + D W Y+ILDEGH I+NP+ + +
Sbjct: 611 CHGILITSYSYIR----------LMQDNINNHD--WHYVILDEGHKIRNPNAAVTLACKQ 658
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HRII+SG+P+QNNLKELW+LF+F P LG F E++ +PI G +A +
Sbjct: 659 FRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 718
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+K+ DV S +L KNE +++ RLT QR++Y+
Sbjct: 719 KTAYKCACVLRDTINPYLLRRMKS------DVKMSLSLPDKNEQVLFCRLTDEQRKVYQN 772
Query: 581 FLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
F++S+ V +G + L L+KIC+HP L + ++ G+ P+D
Sbjct: 773 FIDSKEVYRILNGEMQVFSGLVALRKICNHPDLFS--GGPKIIKGI-----PDD------ 819
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
++ E D F + S K+ + SLL +GH VL+FSQ+R+ML+L++ +
Sbjct: 820 ------ELEEADQFG--YWKRSGKMIVVESLLKIWHKQGHRVLLFSQSRQMLHLLEVFLR 871
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
++ Y +L++DGTT + R ++ + E +FLLT++VGG+G+ LT A+RVI+ DP W
Sbjct: 872 ARDYSYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDW 931
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 932 NPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRILKDPKQRRFF 991
Query: 819 SQQDLRELLSL 829
DL EL +L
Sbjct: 992 KSNDLYELFTL 1002
>gi|326923687|ref|XP_003208066.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial
[Meleagris gallopavo]
Length = 1498
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/551 (38%), Positives = 308/551 (55%), Gaps = 54/551 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++
Sbjct: 494 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 553
Query: 354 RA-----------LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ 400
R ++V P T++ W+KE I G+ + ++ +
Sbjct: 554 RGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKLIREIAS 613
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+L+T+Y +R + D D W Y+ILDEGH I+NP+ + +
Sbjct: 614 CHGILITSYSYIR----------LMQDNIHSYD--WHYVILDEGHKIRNPNAAVTLACKQ 661
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HRII+SG+P+QNNLKELW+LF+F P LG F E++ +PI G +A +
Sbjct: 662 FRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 721
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+K DV S +L KNE +++ RLT QR++Y+
Sbjct: 722 KTAYKCACVLRDAINPYLLRRMKA------DVKMSLSLPDKNEQVLFCRLTDEQRRVYQN 775
Query: 581 FLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
F++S+ V +G + L L+KIC+HP D+ G +L
Sbjct: 776 FIDSKEVYQILNGDMQVFSGLVALRKICNHP---------DLFSGGPKILK--------- 817
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
+ AD+ E D F + S K+ + SLL +GH VL F+Q+R+ML +++ +
Sbjct: 818 -CLPDADLEEADQFG--YWKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFVR 874
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
+ Y +LR+DGTT + R ++ + E IFLLT++VGG+G+ LT ADRVI+ DP W
Sbjct: 875 DRNYSYLRMDGTTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDW 934
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 935 NPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFF 994
Query: 819 SQQDLRELLSL 829
DL EL +L
Sbjct: 995 KSNDLYELFTL 1005
>gi|256086324|ref|XP_002579350.1| excision repair helicase ercc-6-related [Schistosoma mansoni]
Length = 1299
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 243/640 (37%), Positives = 352/640 (55%), Gaps = 66/640 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLI 352
+ +P + + L+ +Q+ G++WLWSLH + GGIL DDMGLGKT+Q+ FL+GLF S+
Sbjct: 237 FSVPKLLYDKLYDYQKYGVKWLWSLHQRNSGGILADDMGLGKTVQVIAFLSGLFVSSKFS 296
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIV 412
L+V P ++L W EL ++ + R L V + G+LLTTY +
Sbjct: 297 CTVLIVMPVSVLVTWEAELKRWAPGLRVIVFHDNSRADRLKSLVSVQRHGGILLTTYGTL 356
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGT 472
++ + + + E W Y+ILDEGH +KN S + K+ I + H I+++GT
Sbjct: 357 VSSIRDFDILARMGKEFH-----WTYLILDEGHKVKNSSAKTTKAAQAIYADHCILLTGT 411
Query: 473 PIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
+QNNLKELW+L+N LLG K F +Y+ PI RG ++ A EK G +A+ LR
Sbjct: 412 AVQNNLKELWSLYNVTHRGRLLGTQKTFSIEYDKPITRGRERDATRAEKVHGQLMAESLR 471
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSAT-----LSKKNEMIVWLRLTSCQRQLYEAFLN--- 583
I PYFLRR K+EV + ++ + +K E+++W+ L+S Q Y FL
Sbjct: 472 RIIDPYFLRRTKSEVLSKQYNMNAVVPMKDKMPRKTEIVLWVYLSSIQESTYRDFLQLDN 531
Query: 584 -SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMH 642
E+++ SPL L ILKK+CDHP LL+ ++ LN +D ++ H
Sbjct: 532 VKELLMQRTKRSPLMELVILKKLCDHPRLLSTEQC------LNLNLNYDDGN-SKGDNFH 584
Query: 643 IAD-VAEKDDF--QEQHDNISCKISFILSLLDKLIPE--------GHNVLIFSQTRKMLN 691
I + V+ K F EQ S K F+ L+ + + E LIFSQ+ K L+
Sbjct: 585 INEIVSHKIHFPPSEQLIKESGKFLFLHCLMKQFLLELQSNPQRDSPRTLIFSQSIKFLD 644
Query: 692 LIQESI------------------GSKGYKFLRIDG-TTKASDRVKIVNDFQEGDVAPIF 732
+ ++ I ++ LR+DG T K DR+ I+N FQ +
Sbjct: 645 MAEKVILDIKCPVNNHTFGDDNIHYPTQHRILRLDGRTAKVCDRLSIINKFQNDKSYTVM 704
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LLT+QVGG+GLT+T A+RVI++DP+WNP+ D+Q+VDRAYRIGQK DVVVYRL+TC TVEE
Sbjct: 705 LLTTQVGGVGLTITSANRVIILDPSWNPAVDSQAVDRAYRIGQKLDVVVYRLITCATVEE 764
Query: 793 KIYRKQIFKGGLFKTATEHKEQ------IRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
KIYR+QIFK + + T + RYFS+Q+L EL SL +S T++QL
Sbjct: 765 KIYRRQIFKDSVIRQTTSTGQNKTDLDPYRYFSRQELVELFSLGDTR--ISETKRQLDML 822
Query: 847 H-GDQHNMDESLEAHIQFL--DTLG--IAGVSHHSLLFSK 881
H G D S+ H++FL D L + G+S H L+FSK
Sbjct: 823 HDGSDRWSDSSISPHLKFLSSDALKHVVYGLSFHDLMFSK 862
>gi|353231104|emb|CCD77522.1| excision repair helicase ercc-6-related [Schistosoma mansoni]
Length = 1299
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 243/640 (37%), Positives = 352/640 (55%), Gaps = 66/640 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLI 352
+ +P + + L+ +Q+ G++WLWSLH + GGIL DDMGLGKT+Q+ FL+GLF S+
Sbjct: 237 FSVPKLLYDKLYDYQKYGVKWLWSLHQRNSGGILADDMGLGKTVQVIAFLSGLFVSSKFS 296
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIV 412
L+V P ++L W EL ++ + R L V + G+LLTTY +
Sbjct: 297 CTVLIVMPVSVLVTWEAELKRWAPGLRVIVFHDNSRADRLKSLVSVQRHGGILLTTYGTL 356
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGT 472
++ + + + E W Y+ILDEGH +KN S + K+ I + H I+++GT
Sbjct: 357 VSSIRDFDILARMGKEFH-----WTYLILDEGHKVKNSSAKTTKAAQAIYADHCILLTGT 411
Query: 473 PIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
+QNNLKELW+L+N LLG K F +Y+ PI RG ++ A EK G +A+ LR
Sbjct: 412 AVQNNLKELWSLYNVTHRGRLLGTQKTFSIEYDKPITRGRERDATRAEKVHGQLMAESLR 471
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSAT-----LSKKNEMIVWLRLTSCQRQLYEAFLN--- 583
I PYFLRR K+EV + ++ + +K E+++W+ L+S Q Y FL
Sbjct: 472 RIIDPYFLRRTKSEVLSKQYNMNAVVPMKDKMPRKTEIVLWVYLSSIQESTYRDFLQLDN 531
Query: 584 -SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMH 642
E+++ SPL L ILKK+CDHP LL+ ++ LN +D ++ H
Sbjct: 532 VKELLMQRTKRSPLMELVILKKLCDHPRLLSTEQC------LNLNLNYDDGN-SKGDNFH 584
Query: 643 IAD-VAEKDDF--QEQHDNISCKISFILSLLDKLIPE--------GHNVLIFSQTRKMLN 691
I + V+ K F EQ S K F+ L+ + + E LIFSQ+ K L+
Sbjct: 585 INEIVSHKIHFPPSEQLIKESGKFLFLHCLMKQFLLELQSNPQRDSPRTLIFSQSIKFLD 644
Query: 692 LIQESI------------------GSKGYKFLRIDG-TTKASDRVKIVNDFQEGDVAPIF 732
+ ++ I ++ LR+DG T K DR+ I+N FQ +
Sbjct: 645 MAEKVILDIKCPVNNHTFGDDNIHYPTQHRILRLDGRTAKVCDRLSIINKFQNDKSYTVM 704
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LLT+QVGG+GLT+T A+RVI++DP+WNP+ D+Q+VDRAYRIGQK DVVVYRL+TC TVEE
Sbjct: 705 LLTTQVGGVGLTITSANRVIILDPSWNPAVDSQAVDRAYRIGQKLDVVVYRLITCATVEE 764
Query: 793 KIYRKQIFKGGLFKTATEHKEQ------IRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
KIYR+QIFK + + T + RYFS+Q+L EL SL +S T++QL
Sbjct: 765 KIYRRQIFKDSVIRQTTSTGQNKTDLDPYRYFSRQELVELFSLGDTR--ISETKRQLDML 822
Query: 847 H-GDQHNMDESLEAHIQFL--DTLG--IAGVSHHSLLFSK 881
H G D S+ H++FL D L + G+S H L+FSK
Sbjct: 823 HDGSDRWSDSSISPHLKFLSSDALKHVVYGLSFHDLMFSK 862
>gi|224052526|ref|XP_002188227.1| PREDICTED: DNA excision repair protein ERCC-6 [Taeniopygia guttata]
Length = 1449
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/551 (37%), Positives = 307/551 (55%), Gaps = 54/551 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S +
Sbjct: 454 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSNMRT 513
Query: 354 RA-----------LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ 400
R ++V P T+L W+KE + G+ K++ + +
Sbjct: 514 RGSNYRYQGLGPTVIVCPATVLHQWVKEFHTWWPPFRVAVLHETGSYTKSKVKLIHEIAS 573
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+L+T+Y +R + D+ D W Y+ILDEGH I+NP+ + +
Sbjct: 574 CHGILITSYSYIR----------LMQDDIHTYD--WHYVILDEGHKIRNPNAAVTLACKQ 621
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HRII+SG+P+QNNLKELW+LF+F P LG F E++ +PI G +A +
Sbjct: 622 FRTPHRIILSGSPMQNNLKELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYCNASPVQV 681
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+K DV S +L KNE +++ RLT QRQ+Y+
Sbjct: 682 KTAYKCACVLRDTINPYLLRRMKA------DVKMSLSLPDKNEQVLFCRLTEEQRQIYQN 735
Query: 581 FLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
++NS+ V +G L L+ L+KIC+HP + A + +
Sbjct: 736 YINSKEVYQILNGDMQILLGLSTLRKICNHPDFV---------------------ADSPR 774
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
+ + D +D Q + S K+ + SLL +GH VL F+Q+R+M+ +++ +
Sbjct: 775 ILKSVPDAEAEDPNQFGYWKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMMQILEVFVR 834
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
+ Y +LR+DGTT + R +V + E +FLLT++VGG+G+ L ADRVI+ DP W
Sbjct: 835 YRNYSYLRMDGTTAVASRQPLVTKYNEDKSIFLFLLTTRVGGIGVNLVGADRVIIYDPDW 894
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPS D Q+ +RA+RIGQKK+V VYRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 895 NPSVDTQARERAWRIGQKKEVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQNRFF 954
Query: 819 SQQDLRELLSL 829
DL EL +L
Sbjct: 955 KSNDLYELFTL 965
>gi|348507212|ref|XP_003441150.1| PREDICTED: DNA excision repair protein ERCC-6 [Oreochromis
niloticus]
Length = 1436
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/572 (37%), Positives = 322/572 (56%), Gaps = 65/572 (11%)
Query: 274 SDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMG 332
+DDS E DEG + +PG + L+ +Q+ G+RW+W LHCQ GGILGD+MG
Sbjct: 476 TDDSDAEFDEG----------FKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMG 525
Query: 333 LGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTAVG--LSAK 379
LGKT+Q+ FLAGL +S+L R ++V P T++ W+KE
Sbjct: 526 LGKTIQVISFLAGLSYSKLRTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPLFRVA 585
Query: 380 IREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYM 439
+ G+ ++ + + G+L+T+Y VRN ++L+ + D W Y+
Sbjct: 586 VLHETGSFTSNKEKLIPEIAACHGILITSYSAVRNMQETLQ----LYD--------WHYI 633
Query: 440 ILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWF 499
ILDEGH I+NP+ + + + HR I+SG+P+QNNLKELW+LF+F P LG F
Sbjct: 634 ILDEGHKIRNPNAGVTVACKQFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVF 693
Query: 500 KEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLS 559
E++ +PI G +A + + A LR+ I PY LRR+K DV ++ +L
Sbjct: 694 MEQFSVPITMGGYSNASPVQVQTAFKCACVLRDTINPYLLRRMKA------DVKANLSLP 747
Query: 560 KKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAA 617
KNE +++ RLT QRQ+Y++FL+S+ V +G + L L+KIC+HP L +
Sbjct: 748 DKNEQVLFCRLTEEQRQVYQSFLDSKEVYQILNGDMQVFSGLIALRKICNHPDLFS--GG 805
Query: 618 EDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
+L G+ PED E E F ++ S K+ + SLL +
Sbjct: 806 PRILRGI-----PEDQLTEE----------EHFGFWKR----SGKLIVVESLLRLWFRQS 846
Query: 678 HNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
H VL+F+Q+R+ML++++ + Y +L++DGTT S R ++ + E IFLLT++
Sbjct: 847 HRVLLFTQSRQMLDILEVFVRENNYSYLKMDGTTTISSRQPLIARYNEDKSIFIFLLTTK 906
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQK+ V +YRL+T GT+EEKIY +
Sbjct: 907 VGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYRLLTAGTIEEKIYHR 966
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
QIFK L + +Q R+F D+ EL +L
Sbjct: 967 QIFKQFLTNRVLKDPKQRRFFKSNDIYELFTL 998
>gi|345327989|ref|XP_001508174.2| PREDICTED: DNA excision repair protein ERCC-6 [Ornithorhynchus
anatinus]
Length = 882
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/612 (36%), Positives = 335/612 (54%), Gaps = 62/612 (10%)
Query: 239 CVIVSGKLVVNRPDRRDGKLNKS--AHSGLVN--VLDDYSDDSVLEDEGSITLSGPRSTY 294
C SG L N R G+L + +H N L + + V ED+ + + +
Sbjct: 46 CSYASGPLYFNILSRNHGRLKCAFYSHGRRWNGRRLKEKEERRVAEDDTEESDAEFDEGF 105
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR 354
+PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++ R
Sbjct: 106 RVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTR 165
Query: 355 A-----------LVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQYELQYVLQD 401
++V P T++ W+KE I G+ + + +
Sbjct: 166 GSNYRFKGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTNKKVKLIHEIAGC 225
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+G+L+T+Y +R + D + D W Y+ILDEGH I+NP+ + +
Sbjct: 226 QGILITSYSYIR----------LMQDNINNYD--WHYVILDEGHKIRNPNAAVTLACKQF 273
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HRII+SG+P+QNNL+ELW+LF+F P LG F E++ +PI G +A + +
Sbjct: 274 RTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVK 333
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
A LR+ I PY LRR+K DV S +L KNE +++ RLT+ QR++Y+ F
Sbjct: 334 TAYKCACVLRDTINPYLLRRMKA------DVKMSLSLPDKNEQVLFCRLTAEQREVYQNF 387
Query: 582 LNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLN--PEDAALAE 637
++S+ V S G L L+K+C+HP D+ G +L P+D
Sbjct: 388 IDSKEVYSILSGEMQIFPGLMALRKMCNHP---------DLFSGGPKILKNVPDD----- 433
Query: 638 KLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESI 697
++ E+D F + S K+ + SLL +GH VL+FSQ+R+ML++++ +
Sbjct: 434 -------ELEEEDQFG--YWKRSGKMIVVESLLKIWHKQGHRVLLFSQSRQMLHILEVFL 484
Query: 698 GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPA 757
+ Y +L++DGTT + R ++ + E +FLLT++VGG+G+ LT A+RVI+ DP
Sbjct: 485 RGQKYSYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPD 544
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRY 817
WNPSTD Q+ +RA+RIGQK+ V VYRL+T GT+EEKIY +QIFK L + +Q R+
Sbjct: 545 WNPSTDTQARERAWRIGQKRQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRF 604
Query: 818 FSQQDLRELLSL 829
F DL EL +L
Sbjct: 605 FKSNDLYELFTL 616
>gi|410901417|ref|XP_003964192.1| PREDICTED: DNA excision repair protein ERCC-6-like [Takifugu
rubripes]
Length = 1421
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/551 (37%), Positives = 312/551 (56%), Gaps = 54/551 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+Q+ FLAGL +S+L
Sbjct: 493 FKVPGFLWKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQVISFLAGLSYSKLRT 552
Query: 354 RA-----------LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ 400
R ++V P T++ W+KE + G+ ++ + +
Sbjct: 553 RGSNYRYAGLGPTIIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTSNKKKLIPEIAS 612
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+L+T+Y VR +L+G W Y+ILDEGH I+NP+ + + +
Sbjct: 613 CHGILITSYSAVRIMQDTLQGWD------------WHYVILDEGHKIRNPNARVTTACKQ 660
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HR I+SG+P+QNNLKELW+LF+F P LG F E++ +PI G +A +
Sbjct: 661 FRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 720
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+K DV ++ +L KNE +++ +LT QRQ+Y++
Sbjct: 721 QTAFKCACVLRDTINPYLLRRMKA------DVKANLSLPDKNEQVLFCKLTEEQRQVYQS 774
Query: 581 FLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
FL+S+ V +G + L L+KIC+HP L + +L G+ PED E
Sbjct: 775 FLDSKEVYQILNGDMQVFSGLIALRKICNHPDLFS--GGPRLLRGI-----PEDQLTEE- 826
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
E F ++ S K+ + SLL +G VL+F+Q+R+MLN+++ +
Sbjct: 827 ---------EHFGFWKR----SGKLIVVESLLRLWFRQGQRVLLFTQSRQMLNILEVFVR 873
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
Y ++++DGTT S R ++ + E IFLLT++VGGLG+ LT A+RVI+ DP W
Sbjct: 874 ENKYSYVKMDGTTPISSRQPLIACYNEDKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDW 933
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQK+ V +YRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 934 NPSTDTQARERAWRIGQKQQVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFF 993
Query: 819 SQQDLRELLSL 829
D+ EL +L
Sbjct: 994 KSNDIYELFTL 1004
>gi|449281011|gb|EMC88207.1| DNA excision repair protein ERCC-6-like protein, partial [Columba
livia]
Length = 519
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/509 (40%), Positives = 315/509 (61%), Gaps = 42/509 (8%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGK-GGILGDDMGLGKTMQICGFLAGLFHSR 350
S ++ G++ LF HQREG+ +L+ LH +G+ G IL DDMGLGKT+Q+ FL+G+F +
Sbjct: 27 SGLLIYGQMHEKLFQHQREGVAFLYRLHREGRPGSILADDMGLGKTIQVIAFLSGVFDAE 86
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
LI+ L++ P TL+S W+ E +++E+ GT R L+ V + G+++T+Y
Sbjct: 87 LIRHVLLIVPTTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNLERVQRKNGIVITSYQ 146
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ NN K L + + + +WDY+ILDE H IK PS + K + IP+ HR++++
Sbjct: 147 MLINNWKQLASCN-------EQEFVWDYVILDEAHKIKCPSNKTTKCVYAIPAKHRLLLT 199
Query: 471 GTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
GTP+QNNL+E+W+LF+F C LLG K FK +YE PI R K A EK +G +++
Sbjct: 200 GTPVQNNLQEMWSLFDFACQGSLLGTAKTFKMEYENPITRARQKDATPGEKALGLKMSEN 259
Query: 530 LRERIQPYFLRRLKNEV-----------FHED---DVTS-SATLSKKNEMIVWLRLTSCQ 574
L I+PYFLRR K ++ F +D +VT +L++KN+ +VW+ L Q
Sbjct: 260 LMTIIKPYFLRRTKEDIKNNCADKPDAPFLKDPTENVTPVMPSLTRKNDFVVWVYLAPVQ 319
Query: 575 RQLYEAFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP 630
++Y FL+ E++++ SPLA LT+LKK+CDHP LL+ RA + G++ +
Sbjct: 320 EEIYRNFLSLDHVKEVLMTT--RSPLAELTVLKKLCDHPRLLSARACIQL--GLEEQESS 375
Query: 631 EDAALAEK----LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQT 686
E +E A I ++++ QE S K+ F++ LL++L EGH L+FSQ+
Sbjct: 376 EQDHGSEAGMLPCANKIDHLSDETLIQE-----SGKMLFLIGLLERLREEGHRTLVFSQS 430
Query: 687 RKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTL 745
RKML++I+ + + +K +RIDGT T ++R K +N FQ +FLLT+QVGG+G+TL
Sbjct: 431 RKMLDIIEHVLSCRQFKVMRIDGTVTHLTEREKRINAFQSNKDYSVFLLTTQVGGVGITL 490
Query: 746 TKADRVIVVDPAWNPSTDNQSVDRAYRIG 774
T A RV++ DP+WNP+TD Q+VDRAYRIG
Sbjct: 491 TAASRVVIFDPSWNPATDAQAVDRAYRIG 519
>gi|124487019|ref|NP_001074690.1| DNA excision repair protein ERCC-6 [Mus musculus]
gi|189442813|gb|AAI67234.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6 [synthetic construct]
Length = 1481
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/576 (37%), Positives = 326/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 478 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 527
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTAVGLS 377
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 528 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPP 587
Query: 378 AKIREYFGTCVKTRQYE--LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
++ T T + E ++ ++ GVL+T+Y +R + D+ D
Sbjct: 588 FRVAVLHETGSYTHKKERLIRDIVYCHGVLITSYSYIR----------LMQDDISRHD-- 635
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 636 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 695
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 696 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 749
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP
Sbjct: 750 LSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNGENQIFSGLVALRKICNHP---- 805
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
D+ G P++A+ + D E++ F H S K+ + SLL
Sbjct: 806 -----DLFSG-----GPKNASGPPE------DELEEEQFG--HWRRSGKMIVVESLLKIW 847
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + + Y +L++DGTT + R ++ + E +FL
Sbjct: 848 HRQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFL 907
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 908 LTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 967
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 968 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1003
>gi|126522468|gb|AAI32448.1| Ercc6 protein [Mus musculus]
Length = 1157
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/576 (37%), Positives = 322/576 (55%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 154 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 203
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTAVGLS 377
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 204 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPP 263
Query: 378 AKIREYFGTCVKTRQYE--LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
++ T T + E ++ ++ GVL+T+Y +R + D+ D
Sbjct: 264 FRVAVLHETGSYTHKKERLIRDIVYCHGVLITSYSYIR----------LMQDDISRHD-- 311
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 312 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 371
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 372 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 425
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 426 LSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNGENQIFSGLVALRKICNHPDLFS 485
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
G + P + L E+ Q H S K+ + SLL
Sbjct: 486 --------GGPKNASGPPEDELEEE--------------QFGHWRRSGKMIVVESLLKIW 523
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + + Y +L++DGTT + R ++ + E +FL
Sbjct: 524 HRQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFL 583
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 584 LTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 643
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 644 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 679
>gi|125833380|ref|XP_688972.2| PREDICTED: DNA excision repair protein ERCC-6 [Danio rerio]
Length = 1390
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/551 (37%), Positives = 312/551 (56%), Gaps = 54/551 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RW+W LHCQ GGILGD+MGLGKT+QI FLAGL +S+L
Sbjct: 474 FKIPGFLWKKLFKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKLKT 533
Query: 354 RA-----------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYE--LQYVLQ 400
R ++V P T++ W+KE ++ T T + E + ++
Sbjct: 534 RGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHDTGSFTSKKEKLIPEIVA 593
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+L+T+Y +R + D D W Y+ILDEGH I+NP+ + +
Sbjct: 594 SHGILITSYSYIR----------IMQDYIQRYD--WHYVILDEGHKIRNPNAGVTTACKQ 641
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HR I+SG+P+QNNLKELW+LF+F P LG F E++ +PI G +A +
Sbjct: 642 FRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQV 701
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+K DV ++ +L KNE +++ RLT QRQ+Y+
Sbjct: 702 QTAYKCACVLRDTINPYLLRRMKA------DVKANLSLPDKNEQVLFCRLTEDQRQVYQT 755
Query: 581 FLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
FL+S+ V +G + L L+KIC+HP L T +L G+ P D
Sbjct: 756 FLDSKEVYQILNGDMQVFSGLIALRKICNHPDLFT--GGPRLLRGI-----PHD------ 802
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
+ E++ F + S K+ + SLL +GH VL+F+Q+R+ML +++ +
Sbjct: 803 ------QLTEEEHFG--YWKRSGKMIVVESLLRLWHKQGHRVLLFTQSRQMLEILEVFVK 854
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
G+ +L++DGTT + R ++ F + +F+LT++VGGLG+ LT A+RV++ DP W
Sbjct: 855 ENGFSYLKMDGTTTIASRQPLIAQFNQNKDIFVFILTTRVGGLGVNLTGANRVVIYDPDW 914
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQK+ V VYRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 915 NPSTDTQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFF 974
Query: 819 SQQDLRELLSL 829
D+ EL +L
Sbjct: 975 KSNDIYELFTL 985
>gi|432905593|ref|XP_004077453.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oryzias
latipes]
Length = 1424
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/662 (35%), Positives = 349/662 (52%), Gaps = 83/662 (12%)
Query: 190 DEHLSRVHETKKHHQRQKK-NEPKRVH---DGERFNGQSFVSGGREEYDDEDDCVIVSGK 245
+E+ + ++ K H R+KK N+ + H E NG SG + Y D+ D +
Sbjct: 399 NEYELKPYKRKPEHWRKKKANDDEEYHPDSSDEEENG----SGKMKRYKDDGDVEYYRQR 454
Query: 246 LVVNRPDRRDGKLNKSAHSGLVNVLDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNML 304
+ RR + ++ SDDS E DEG + +PG + L
Sbjct: 455 I------RRWKRNRLREKEEKRERGEEMSDDSDAEFDEG----------FKVPGFLWKKL 498
Query: 305 FPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA--------- 355
+ +Q+ G+RW+W LHCQ GGILGD+MGLGKT+Q+ FLAGL +S+L R
Sbjct: 499 YKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVISFLAGLSYSKLRTRGSNYRYAGLG 558
Query: 356 --LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDI 411
++V P T++ W+KE + G+ ++ + + G+L+T+Y
Sbjct: 559 PTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTSKKEKLIPEIASCHGILITSYSA 618
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
VRN + D D W Y+ILDEGH I+NP+ + + + HR I+SG
Sbjct: 619 VRN----------LQDILIRYD--WHYIILDEGHKIRNPNAAVTAACKQFQTPHRFILSG 666
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
+P+QNNLKELW+LF+F P LG F E++ +PI G +A + + A LR
Sbjct: 667 SPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAYKCACVLR 726
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
+ I PY LRR+K DV ++ +L KNE +++ RLT QRQ+Y++FL+S+ V
Sbjct: 727 DTINPYLLRRMKA------DVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSKEVYQIL 780
Query: 592 DG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLN--PEDAALAEKLAMHIADVA 647
+G + L L+KIC+HP D+ G ML PED E
Sbjct: 781 NGDMQVFSGLIALRKICNHP---------DLFSGGPRMLKGIPEDQLTEE---------- 821
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRI 707
E F + S K+ + SLL +GH VL+FSQ+R+ML++++ + Y +L++
Sbjct: 822 EHFGFWRR----SGKLIVVESLLRLWFKQGHRVLLFSQSRQMLDILEVFVRENNYSYLKM 877
Query: 708 DGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSV 767
DGTT + R ++ + + IFLLT++VGGLG+ LT A+RVI+ DP WNPSTD Q+
Sbjct: 878 DGTTTIASRQPLIARYNQDRSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQAR 937
Query: 768 DRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELL 827
+RA+RIGQ V +YRL+T GT+EEKIY +QIFK L + +Q R+F D+ EL
Sbjct: 938 ERAWRIGQTLQVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELF 997
Query: 828 SL 829
+L
Sbjct: 998 TL 999
>gi|73997935|ref|XP_534944.2| PREDICTED: DNA excision repair protein ERCC-6 [Canis lupus
familiaris]
Length = 1486
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/555 (37%), Positives = 312/555 (56%), Gaps = 56/555 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++
Sbjct: 493 FKMPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 552
Query: 354 RA-----------LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ 400
R ++V P T++ W+KE I G+ + ++ ++ +
Sbjct: 553 RGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKEKLIRDIAH 612
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+L+T+Y +R + D+ D W Y+ILDEGH I+NP+ + +
Sbjct: 613 CHGILITSYSYIR----------LMQDDISRHD--WHYVILDEGHKIRNPNAAVTLACKQ 660
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HRII+SG+P+QNNL+ELW+LF+F P LG F E++ +PI G +A +
Sbjct: 661 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 720
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+K+ DV S +L KNE +++ RLT Q ++Y+
Sbjct: 721 KTAYKCACVLRDTINPYLLRRMKS------DVKMSLSLPDKNEQVLFCRLTEEQHKVYQN 774
Query: 581 FLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
F++S+ V +G + L L+KIC+HP D+ G L
Sbjct: 775 FIDSKEVYRILNGDMQIFSGLVALRKICNHP---------DLFSGGPKNLKT-------- 817
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
I D E+D F + S K+ + SLL +G VL+FSQ+R+ML++++ +
Sbjct: 818 ----IPDDDEEDQFG--YWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR 871
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
++ Y +L++DGTT + R ++ + E +FLLT++VGG+G+ LT A+RVI+ DP W
Sbjct: 872 AQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDW 931
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 932 NPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFF 991
Query: 819 SQQDLRELLSLPKQG 833
DL EL +L G
Sbjct: 992 KSNDLYELFTLTSPG 1006
>gi|431901320|gb|ELK08347.1| DNA excision repair protein ERCC-6 [Pteropus alecto]
Length = 1491
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/558 (37%), Positives = 313/558 (56%), Gaps = 62/558 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++
Sbjct: 492 FKIPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 551
Query: 354 RA------------------LVVAPKTLLSHWIKE--LTAVGLSAKIREYFGTCVKTRQY 393
R ++V P T++ W+KE + I G+C + ++
Sbjct: 552 RGSNYRQVLLCRLFDGLGPTIIVCPTTVMHQWVKEFHMWWPPFRVAILHESGSCTRKKEK 611
Query: 394 ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQ 453
++ + + G+L+T+Y +R + D+ D W Y+ILDEGH I+NP+
Sbjct: 612 LIRDIARCHGILITSYSYIR----------LMQDDISSHD--WHYVILDEGHKIRNPNAA 659
Query: 454 RAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDK 513
+ + + HRII+SG+P+QNNL+ELW+LF+F P LG F E++ +PI G
Sbjct: 660 ITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYS 719
Query: 514 HALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSC 573
+A + + A LR+ I PY LRR+K+ DV S +L KNE +++ RLT
Sbjct: 720 NASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMSLSLPDKNEQVLFCRLTDE 773
Query: 574 QRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
Q ++Y+ F++S+ V +G + L L+KIC+HP L + G ++
Sbjct: 774 QHKVYQNFIDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS--------GGPKNLKGIP 825
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
D L E D F + S K+ + SLL +G VL+FSQ+R+ML
Sbjct: 826 DDELGE------------DQFG--YWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLG 871
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+++ + ++ Y +L++DGTT + R ++ + E +FLLT++VGGLG+ LT A+RV
Sbjct: 872 ILEIFLRAQNYSYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRV 931
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH 811
I+ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKIY +QIFK L +
Sbjct: 932 IIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLINRVLKD 991
Query: 812 KEQIRYFSQQDLRELLSL 829
+Q R+F DL EL +L
Sbjct: 992 PKQRRFFKSNDLYELFTL 1009
>gi|417406531|gb|JAA49919.1| Putative snf2 family dna-dependent atpase domain-containing protein
[Desmodus rotundus]
Length = 1486
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/577 (37%), Positives = 327/577 (56%), Gaps = 68/577 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 476 LEDDSEESDAEFDEG----------FKIPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 525
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTAVGLS 377
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 526 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFQGLGPTVIVCPTTVMHQWVKEFHTWWPP 585
Query: 378 AKIREYFGTCVKTRQYE--LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
++ T T + E +Q ++ G+L+T+Y +R + D+ D
Sbjct: 586 FRVAVLHETGSSTHKKEKLIQDIVHCHGILITSYSYIR----------LMQDDISRHD-- 633
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 634 WHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 693
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 694 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 747
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + LT L+KIC+HP
Sbjct: 748 LSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGETQIFSGLTALRKICNHP---- 803
Query: 614 KRAAEDVLDGMDSMLNPED-AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
D+ G P++ +++ D E+D F + S K+ + SLL
Sbjct: 804 -----DLFSG-----GPKNHKGISD-------DELEEDRF--GYWKRSGKMIVVESLLKI 844
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIF 732
+ VL+FSQ+R+ML+L++ + ++ Y +L++DGTT + R ++ F + +F
Sbjct: 845 WHKQNQRVLLFSQSRQMLDLLEVFLRAQKYSYLKMDGTTTIASRQPLIARFNKETSIFVF 904
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LLT++VGGLG+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EE
Sbjct: 905 LLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEE 964
Query: 793 KIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
KIY +QIFK L + +Q R+F DL EL SL
Sbjct: 965 KIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFSL 1001
>gi|354465787|ref|XP_003495358.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cricetulus
griseus]
Length = 1478
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/576 (37%), Positives = 324/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 475 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 524
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKE--LTAVG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE +
Sbjct: 525 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHMWWPP 584
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ ++ GVL+T+Y +R + D+ D
Sbjct: 585 FRVAILHETGSYAHKKERLVRDIVHCHGVLITSYSYIR----------LMQDDISRHD-- 632
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 633 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 692
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 693 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 746
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 747 LSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGENQIFSGLVALRKICNHPDLFS 806
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ PED E+D F + S K+ + SLL
Sbjct: 807 --GGPKNLSGL-----PEDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 844
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + + Y +L++DGTT + R ++ + E +FL
Sbjct: 845 HKQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFL 904
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGG+G+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 905 LTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 964
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 965 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1000
>gi|344274673|ref|XP_003409139.1| PREDICTED: DNA excision repair protein ERCC-6 [Loxodonta africana]
Length = 1501
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/591 (37%), Positives = 328/591 (55%), Gaps = 74/591 (12%)
Query: 269 VLDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGIL 327
L+D S+DS E DEG + +PG + LF +Q+ G+RWLW LHCQ GGIL
Sbjct: 485 TLEDSSEDSDAEFDEG----------FKVPGFLFRKLFKYQQTGVRWLWELHCQQAGGIL 534
Query: 328 GDDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTAVGL 376
GD+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 535 GDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP 594
Query: 377 SAKIREYFGTCVKTRQYE--LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDA 434
++ T T + E ++ + + G+L+T+Y +R + D+ D
Sbjct: 595 PFRVAILHDTGSYTHKKEKLIRDIARYHGILITSYSYIR----------LMQDDISRHD- 643
Query: 435 IWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLG 494
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 644 -WHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLG 702
Query: 495 DNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTS 554
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV
Sbjct: 703 TLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKM 756
Query: 555 SATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLL 612
S +L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L
Sbjct: 757 SLSLPDKNEQVLFCRLTDEQHEVYQNFIDSKEVYRILNGEMQIFSGLVALRKICNHPDLF 816
Query: 613 T--KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL 670
+ R + DG +E+D F + S K+ + SLL
Sbjct: 817 SGGPRHLTGLPDGE----------------------SEEDQF--GYWKRSGKMIVVESLL 852
Query: 671 DKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP 730
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E
Sbjct: 853 KIWHKQGQRVLLFSQSRQMLDILEVFLRARKYSYLKMDGTTTIASRQPLITRYNEDTSIF 912
Query: 731 IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTV 790
+FLLT++VGG+G+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+
Sbjct: 913 VFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTI 972
Query: 791 EEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL----PKQGFDVS 837
EEKIY +QIFK L + +Q R+F DL EL +L P Q + S
Sbjct: 973 EEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDPSQSTETS 1023
>gi|300797826|ref|NP_001178272.1| DNA excision repair protein ERCC-6 [Bos taurus]
Length = 1481
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 228/656 (34%), Positives = 346/656 (52%), Gaps = 83/656 (12%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 472 LEDDSEESDAEFDEG----------FKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 521
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 522 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPA 581
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
+ G+ ++ ++ + + G+L+T+Y +R + D+ D
Sbjct: 582 FRVAVLHETGSFTHKKEKLVRDIARCHGILITSYSYIR----------LMQDDISRHD-- 629
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 630 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 689
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 690 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 743
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 744 LSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGEMQIFSGLVALRKICNHPDLFS 803
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
G ++ D L E D F + S K+ + SLL
Sbjct: 804 --------GGPKNLKGIPDEELGE------------DQFG--YWKRSGKMIVVESLLKIW 841
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 842 HKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFL 901
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 902 LTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 961
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPK---------------QGFDVSL 838
IY +QIFK L + +Q R+F DL EL +L G DV
Sbjct: 962 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDTSQSTETSAIFAGTGSDVQT 1021
Query: 839 TQQQLHEEHGDQHNMDESLEAHIQFLD--TLGIAGVSHHSLLFSKTARVQVVQEEE 892
++ L D+S+ QF D T A +S + + + V V ++
Sbjct: 1022 PKRHLKRRLQQACGTDQSVPVDRQFPDCKTSASAAMSSEEVCAASVSEVNAVTSDQ 1077
>gi|426255946|ref|XP_004021608.1| PREDICTED: DNA excision repair protein ERCC-6 [Ovis aries]
Length = 1481
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/551 (37%), Positives = 311/551 (56%), Gaps = 55/551 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++
Sbjct: 487 FKMPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 546
Query: 354 RA-----------LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ 400
R ++V P T++ W+KE + G+ ++ ++ +
Sbjct: 547 RGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSFTHKKERLVRDIAH 606
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+L+T+Y +R + D+ D W Y+ILDEGH I+NP+ + +
Sbjct: 607 CHGILITSYSYIR----------LMQDDISRHD--WHYVILDEGHKIRNPNAAITLACKQ 654
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HRII+SG+P+QNNL+ELW+LF+F P LG F E++ +PI G +A +
Sbjct: 655 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 714
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+K+ DV S +L KNE +++ RLT Q ++Y+
Sbjct: 715 KTAYKCACVLRDTINPYLLRRMKS------DVKMSLSLPDKNEQVLFCRLTDEQHKVYQN 768
Query: 581 FLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
F++S+ V +G + L L+KIC+HP L + G S+ D L E
Sbjct: 769 FIDSKEVYRILNGEMQIFSGLVALRKICNHPDLFS--------GGPKSLKGAPDEELGE- 819
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
D+F + S K+ + SLL +G VL+FSQ+R+ML++++ +
Sbjct: 820 -----------DEFG--YWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR 866
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
++ Y +L++DGTT + R ++ + E +FLLT++VGGLG+ LT A+RVI+ DP W
Sbjct: 867 AQKYSYLKMDGTTAIASRQPLIARYNEDTSVFVFLLTTRVGGLGVNLTGANRVIIYDPDW 926
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 927 NPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFF 986
Query: 819 SQQDLRELLSL 829
DL EL +L
Sbjct: 987 KSNDLYELFTL 997
>gi|395858719|ref|XP_003801707.1| PREDICTED: DNA excision repair protein ERCC-6 [Otolemur garnettii]
Length = 1490
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/551 (38%), Positives = 311/551 (56%), Gaps = 55/551 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++
Sbjct: 496 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 555
Query: 354 RA-----------LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ 400
R ++V P T++ W+KE I G+ ++ ++ +
Sbjct: 556 RGSNYRYEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDIAH 615
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+L+T+Y +R + D+ D W Y+ILDEGH I+NP+ + +
Sbjct: 616 CHGILITSYSYIR----------LMQDDISRYD--WHYVILDEGHKIRNPNAAVTLACKQ 663
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HRII+SG+P+QNNL+ELW+LF+F P LG F E++ +PI G +A +
Sbjct: 664 FRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQV 723
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+K+ DV S +L KNE +++ RLT Q ++Y+
Sbjct: 724 KTAYKCACVLRDTINPYLLRRMKS------DVKMSLSLPDKNEQVLFCRLTDEQHKIYQN 777
Query: 581 FLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
F++S+ V +G L L+KIC+HP L + L G+ PED
Sbjct: 778 FVDSKEVYGILNGEMQIFPGLIALRKICNHPDLFS--GGTKNLKGL-----PEDEL---- 826
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
E+D F + S K+ + SLL +G VL+FSQ+R+ML++++ +
Sbjct: 827 ---------EEDQFG--YWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR 875
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
++ Y +L++DGTT + R ++ + E +FLLT++VGGLG+ LT A+RVI+ DP W
Sbjct: 876 AQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDW 935
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 936 NPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFF 995
Query: 819 SQQDLRELLSL 829
DL EL SL
Sbjct: 996 KSNDLYELFSL 1006
>gi|301783501|ref|XP_002927161.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda
melanoleuca]
Length = 1481
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/551 (37%), Positives = 313/551 (56%), Gaps = 55/551 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++
Sbjct: 488 FKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 547
Query: 354 RA-----------LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ 400
R ++V P T++ W+KE I G+ + ++ ++ +
Sbjct: 548 RGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKEKLIRDIAH 607
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+L+T+Y +R + D+ D W Y+ILDEGH I+NP+ + +
Sbjct: 608 CHGILITSYSYIR----------LMQDDISRHD--WHYVILDEGHKIRNPNAAVTLACKQ 655
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HRII+SG+P+QNNL+ELW+LF+F P LG F E++ +PI G +A +
Sbjct: 656 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 715
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+K+ DV S +L KNE +++ RLT Q ++Y+
Sbjct: 716 KTAYKCACVLRDTINPYLLRRMKS------DVKMSLSLPDKNEQVLFCRLTEEQHRVYQN 769
Query: 581 FLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
F++S+ V +G + L L+KIC+HP D+ G NP+D E
Sbjct: 770 FIDSKEVYRILNGDMQIFSGLVALRKICNHP---------DLFSGGPK--NPKDIPDGE- 817
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
E+D F + S K+ + SLL +G VL+FSQ+R+ML++++ +
Sbjct: 818 --------LEEDQFG--YWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR 867
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
++ Y +L++DGTT + R ++ + E +FLLT++VGG+G+ LT A+RVI+ DP W
Sbjct: 868 AQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDW 927
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKI+ +QIFK L + +Q R+F
Sbjct: 928 NPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIFHRQIFKQFLTNRVLKDPKQRRFF 987
Query: 819 SQQDLRELLSL 829
DL EL +L
Sbjct: 988 KSNDLYELFTL 998
>gi|355782760|gb|EHH64681.1| hypothetical protein EGM_17967 [Macaca fascicularis]
Length = 1495
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 323/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 484 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 533
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 534 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 593
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 594 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 641
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 642 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 701
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 702 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 755
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 756 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 815
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 816 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 853
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 854 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFL 913
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 914 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 973
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 974 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1009
>gi|402880149|ref|XP_003903675.1| PREDICTED: DNA excision repair protein ERCC-6 [Papio anubis]
Length = 1494
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 323/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 483 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 532
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 533 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 592
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 593 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 640
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 641 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 700
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 701 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 754
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 755 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 814
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 815 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 852
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 853 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFL 912
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 913 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 972
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 973 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1008
>gi|426364707|ref|XP_004049439.1| PREDICTED: piggyBac transposable element-derived protein 3-like
isoform 1 [Gorilla gorilla gorilla]
Length = 1493
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 323/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 482 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 531
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 532 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 591
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 592 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 639
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 640 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 699
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 700 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 753
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 754 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 813
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 814 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 851
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 852 HKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLITRYNEDTSIFVFL 911
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 912 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 971
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 972 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1007
>gi|383416487|gb|AFH31457.1| DNA excision repair protein ERCC-6 [Macaca mulatta]
Length = 1495
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 323/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 484 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 533
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 534 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 593
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 594 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 641
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 642 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 701
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 702 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 755
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 756 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 815
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 816 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 853
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 854 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFL 913
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 914 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 973
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 974 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1009
>gi|297686445|ref|XP_002820759.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6
[Pongo abelii]
Length = 1493
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 323/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 482 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 531
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 532 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 591
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 592 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 639
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 640 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 699
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 700 LPVFMEQFSVPITMGGYSNASSVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 753
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 754 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 813
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 814 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 851
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 852 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFL 911
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 912 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 971
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 972 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1007
>gi|355562411|gb|EHH19005.1| hypothetical protein EGK_19625 [Macaca mulatta]
Length = 1493
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 323/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 482 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 531
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 532 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 591
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 592 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 639
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 640 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 699
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 700 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 753
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 754 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 813
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 814 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 851
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 852 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFL 911
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 912 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 971
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 972 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1007
>gi|397475294|ref|XP_003809078.1| PREDICTED: DNA excision repair protein ERCC-6 [Pan paniscus]
Length = 1491
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/592 (36%), Positives = 324/592 (54%), Gaps = 65/592 (10%)
Query: 253 RRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGL 312
RR KL + + DD + DEG + +PG + LF +Q+ G+
Sbjct: 464 RRWNKLRLQDKEKCLKLEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGV 513
Query: 313 RWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPK 361
RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++ R ++V P
Sbjct: 514 RWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPT 573
Query: 362 TLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
T++ W+KE I G+ ++ ++ V G+L+T+Y +R
Sbjct: 574 TVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR------ 627
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
+ D+ D W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+
Sbjct: 628 ----LMQDDISRYD--WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLR 681
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
ELW+LF+F P LG F E++ +PI G +A + + A LR+ I PY L
Sbjct: 682 ELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLL 741
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LA 597
RR+K+ DV S +L KNE +++ RLT Q ++Y+ F++S+ V +G +
Sbjct: 742 RRMKS------DVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFS 795
Query: 598 ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHD 657
L L+KIC+HP L + L G+ P+D E+D F +
Sbjct: 796 GLIALRKICNHPDLFS--GGPKNLKGL-----PDDEL-------------EEDQFG--YW 833
Query: 658 NISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRV 717
S K+ + SLL +G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R
Sbjct: 834 KRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQ 893
Query: 718 KIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKK 777
++ + E +FLLT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK
Sbjct: 894 PLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKK 953
Query: 778 DVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
V VYRL+T GT+EEKIY +QIFK L + +Q R+F DL EL +L
Sbjct: 954 QVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1005
>gi|109088973|ref|XP_001107536.1| PREDICTED: DNA excision repair protein ERCC-6 [Macaca mulatta]
Length = 1496
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 323/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 485 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 534
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 535 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 594
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 595 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 642
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 643 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 702
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 703 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 756
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 757 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 816
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 817 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 854
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 855 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFL 914
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 915 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 974
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 975 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1010
>gi|291233864|ref|XP_002736872.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Saccoglossus
kowalevskii]
Length = 1503
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 227/665 (34%), Positives = 350/665 (52%), Gaps = 92/665 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL---- 351
+PG++ L+ +Q+ G++WLW LHCQ GGI+GD+MGLGKT+QI FL+GL +S+L
Sbjct: 525 IPGQVWCKLYKYQKTGVKWLWELHCQQTGGIVGDEMGLGKTIQIISFLSGLKYSKLQIKG 584
Query: 352 -----IKRALVVAPKTLLSHWIKELTAVGLSAKIREYF--GTCVKTRQYELQYVLQDKGV 404
+ L+V P T++ W++E ++ + G+ ++ + +++ +GV
Sbjct: 585 DKYIGLGPVLIVCPTTVMHQWVREFHTWYPDFRVAIFHDSGSYSGSKASLVYDIVKSRGV 644
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
L+T+Y VR L WDY+ILDEGH I+NP ++ + +
Sbjct: 645 LVTSYAAVRIQQDMLLRYQ------------WDYVILDEGHKIRNPDADVTQACKQFRTP 692
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
HRII+SG+P+QNNL+ELW+LF+F P LG F +++ +PI G +A D + +
Sbjct: 693 HRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMQEFSVPITMGGYSNASDVQVQTAY 752
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS 584
A LR+ I PY LRR+K DV + L KNE +++ RLT Q +Y+ +++S
Sbjct: 753 KCACVLRDTINPYLLRRMKQ------DVKVNLNLPDKNEQVLFCRLTPEQVDVYKEYIDS 806
Query: 585 EIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMH 642
+ G A L L+KIC+HP + T VL G
Sbjct: 807 GECHAILTGRYKVFAGLITLRKICNHPDIST--GGPRVLKG------------------- 845
Query: 643 IADVAEKDDFQEQ----HDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
D DD E+ + S K+ I SLL +GH VL+F+Q+++ML+++ +
Sbjct: 846 --DYEHDDDIPEEMRYGYWKKSGKLIVIESLLKLWKKQGHRVLLFTQSKQMLDILDSFVT 903
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
S+GY ++R+DG+T S R VN F + +FLLT++VGGLG+ L ADRV++ DP W
Sbjct: 904 SRGYNYMRMDGSTPISSRQPAVNRFNQDKSVFVFLLTTRVGGLGVNLIGADRVVIYDPDW 963
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQ K V +YRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 964 NPSTDMQARERAWRIGQNKQVTIYRLLTSGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFF 1023
Query: 819 SQQDLRELLSLPKQ---------------GFDVSL-----------TQQQLHEEHGDQHN 852
DL EL +L Q G D+++ + QQL EE Q +
Sbjct: 1024 KTNDLHELFTLTSQDTKQGTETHAIFAGTGSDITINLKKSKIRRSHSNQQLCEERNKQSS 1083
Query: 853 --MDESLEA--HIQFLDTLGIAGVSHHSLLFSKTARVQVVQEEEEATRR----KGTAFVG 904
+ SL A ++ LD + A + + L S T + + +E +A + +G G
Sbjct: 1084 PILHRSLTAPGSLKKLDEIHTAELGDNDTLNSATQSTEEMHQEPKAEKDGIVLEGAVLSG 1143
Query: 905 NSSSS 909
+S ++
Sbjct: 1144 DSKAA 1148
>gi|4557565|ref|NP_000115.1| DNA excision repair protein ERCC-6 [Homo sapiens]
gi|416959|sp|Q03468.1|ERCC6_HUMAN RecName: Full=DNA excision repair protein ERCC-6; AltName:
Full=ATP-dependent helicase ERCC6; AltName: Full=Cockayne
syndrome protein CSB
gi|182181|gb|AAA52397.1| excision repair protein [Homo sapiens]
gi|27501924|gb|AAO13487.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6 [Homo sapiens]
gi|119613500|gb|EAW93094.1| hCG32740, isoform CRA_a [Homo sapiens]
gi|119613503|gb|EAW93097.1| hCG32740, isoform CRA_a [Homo sapiens]
Length = 1493
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 323/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 482 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 531
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 532 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 591
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 592 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 639
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 640 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 699
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 700 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 753
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 754 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 813
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 814 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 851
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 852 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFL 911
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 912 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 971
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 972 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1007
>gi|117558161|gb|AAI27105.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6 [Homo sapiens]
Length = 1493
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 323/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 482 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 531
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 532 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 591
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 592 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 639
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 640 WHYVILDEGHKIRNPNAAVTLACKQFCTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 699
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 700 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 753
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 754 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 813
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 814 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 851
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 852 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFL 911
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 912 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 971
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 972 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1007
>gi|119613505|gb|EAW93099.1| hCG32740, isoform CRA_e [Homo sapiens]
Length = 1356
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 323/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 482 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 531
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 532 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 591
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 592 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 639
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 640 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 699
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 700 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 753
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 754 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 813
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 814 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 851
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 852 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFL 911
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 912 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 971
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 972 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1007
>gi|47228866|emb|CAG09381.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1286
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/573 (37%), Positives = 318/573 (55%), Gaps = 65/573 (11%)
Query: 273 YSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDM 331
++DDS E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILGD+M
Sbjct: 367 FTDDSDEEFDEG----------FKVPGFLWKKLFKYQQTGVRWLWELHCQQAGGILGDEM 416
Query: 332 GLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VGLSA 378
GLGKT+Q+ FLAGL +S+L R ++V P T++ W++E A
Sbjct: 417 GLGKTIQVISFLAGLSYSKLRTRGSNYRYAGLGPTIIVCPATVMHQWVREFHAWWPPFRV 476
Query: 379 KIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDY 438
+ G+ ++ + ++ G+L+T+Y VR +L+ W Y
Sbjct: 477 AVLHETGSFSSNKKKLIPEIVSCHGILITSYSAVRIMQDTLQRWD------------WHY 524
Query: 439 MILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKW 498
+ILDEGH I+NP+ + + + HR I+SG+P+QNNLKELW+LF+F P LG
Sbjct: 525 IILDEGHKIRNPNAGVTLACKQFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPV 584
Query: 499 FKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATL 558
F E++ +PI G +A + + A LR+ I PY LRR+K DV ++ +L
Sbjct: 585 FMEQFSVPITMGGYSNASPVQVQTAFKCACVLRDTINPYLLRRMKA------DVKANLSL 638
Query: 559 SKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF--DGSPLAALTILKKICDHPLLLTKRA 616
KNE +++ +LT QRQ+Y +FL+S+ V D L L+KIC+HP L +
Sbjct: 639 PDKNEQVLFCKLTEEQRQVYRSFLDSKEVYQILNRDMQVFPGLIALRKICNHPDLFS--G 696
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
L G+ PED +A++D F S K+ + SLL +
Sbjct: 697 GPQFLRGV-----PED------------QLAQEDRFGFWKR--SGKLIVVESLLRLWFRQ 737
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
G VL+F+Q+R+MLN+++ + Y +L++DGTT S R ++ + E + IFLLT+
Sbjct: 738 GQRVLLFTQSRQMLNILEVFVRENNYSYLKMDGTTSISSRQPLIARYNEDNSIFIFLLTT 797
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+VGGLG+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQ + V +YRL+T GT+EEKIY
Sbjct: 798 KVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQTQQVTIYRLLTAGTIEEKIYH 857
Query: 797 KQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
+QIFK L + +Q R+F D+ EL +L
Sbjct: 858 RQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTL 890
>gi|296220127|ref|XP_002756186.1| PREDICTED: DNA excision repair protein ERCC-6 [Callithrix jacchus]
Length = 1490
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 323/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 480 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 529
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 530 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 589
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 590 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 637
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 638 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 697
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 698 LPVFLEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 751
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 752 LSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 811
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 812 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 849
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 850 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDKSIFVFL 909
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 910 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 969
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 970 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1005
>gi|441657345|ref|XP_004091168.1| PREDICTED: piggyBac transposable element-derived protein 3-like
isoform 1 [Nomascus leucogenys]
Length = 1492
Score = 371 bits (953), Expect = e-99, Method: Compositional matrix adjust.
Identities = 213/576 (36%), Positives = 322/576 (55%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 481 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 530
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 531 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 590
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 591 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 638
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 639 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 698
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 699 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 752
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 753 LSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 812
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P++ A++ + S K+ + SLL
Sbjct: 813 --GGPKNLKGL-----PDEELEADQFG---------------YWKRSGKMIVVESLLKIW 850
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 851 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTVASRQPLITRYNEDTSIFVFL 910
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 911 LTTRVGGLGINLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 970
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 971 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1006
>gi|403276713|ref|XP_003930033.1| PREDICTED: DNA excision repair protein ERCC-6 [Saimiri boliviensis
boliviensis]
Length = 1492
Score = 371 bits (953), Expect = e-99, Method: Compositional matrix adjust.
Identities = 209/551 (37%), Positives = 312/551 (56%), Gaps = 55/551 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++
Sbjct: 496 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 555
Query: 354 RA-----------LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ 400
R ++V P T++ W+KE I G+ ++ ++ V
Sbjct: 556 RGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAH 615
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
G+L+T+Y +R + D+ D W Y+ILDEGH I+NP+ + +
Sbjct: 616 CHGILITSYSYIR----------LMQDDISRYD--WHYVILDEGHKIRNPNAAVTLACKQ 663
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HRII+SG+P+QNNL+ELW+LF+F P LG F E++ +PI G +A +
Sbjct: 664 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFLEQFSVPITMGGYSNASPVQV 723
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+K+ DV S +L KNE +++ RLT Q ++Y+
Sbjct: 724 KTAYKCACVLRDTINPYLLRRMKS------DVKMSLSLPDKNEQVLFCRLTDEQHKVYQN 777
Query: 581 FLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
F++S+ V +G + L L+KIC+HP L + L G+ P+D
Sbjct: 778 FIDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS--GGPKNLKGL-----PDDEL---- 826
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
E+D F + S K+ + SLL +G VL+FSQ+R+ML++++ +
Sbjct: 827 ---------EEDQFG--YWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR 875
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
++ Y +L++DGTT + R ++ + E +FLLT++VGGLG+ LT A+RVI+ DP W
Sbjct: 876 AQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDW 935
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 936 NPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFF 995
Query: 819 SQQDLRELLSL 829
DL EL +L
Sbjct: 996 KSNDLYELFTL 1006
>gi|281346214|gb|EFB21798.1| hypothetical protein PANDA_016920 [Ailuropoda melanoleuca]
Length = 1488
Score = 371 bits (952), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 207/558 (37%), Positives = 313/558 (56%), Gaps = 62/558 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + LF +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++
Sbjct: 488 FKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 547
Query: 354 RA------------------LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQY 393
R ++V P T++ W+KE I G+ + ++
Sbjct: 548 RGSNYRQVLLCRLFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKEK 607
Query: 394 ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQ 453
++ + G+L+T+Y +R + D+ D W Y+ILDEGH I+NP+
Sbjct: 608 LIRDIAHCHGILITSYSYIR----------LMQDDISRHD--WHYVILDEGHKIRNPNAA 655
Query: 454 RAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDK 513
+ + + HRII+SG+P+QNNL+ELW+LF+F P LG F E++ +PI G
Sbjct: 656 VTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYS 715
Query: 514 HALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSC 573
+A + + A LR+ I PY LRR+K+ DV S +L KNE +++ RLT
Sbjct: 716 NASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMSLSLPDKNEQVLFCRLTEE 769
Query: 574 QRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
Q ++Y+ F++S+ V +G + L L+KIC+HP D+ G NP+
Sbjct: 770 QHRVYQNFIDSKEVYRILNGDMQIFSGLVALRKICNHP---------DLFSGGPK--NPK 818
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
D E E+D F + S K+ + SLL +G VL+FSQ+R+ML+
Sbjct: 819 DIPDGE---------LEEDQFG--YWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLD 867
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+++ + ++ Y +L++DGTT + R ++ + E +FLLT++VGG+G+ LT A+RV
Sbjct: 868 ILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLTGANRV 927
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH 811
I+ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKI+ +QIFK L +
Sbjct: 928 IIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIFHRQIFKQFLTNRVLKD 987
Query: 812 KEQIRYFSQQDLRELLSL 829
+Q R+F DL EL +L
Sbjct: 988 PKQRRFFKSNDLYELFTL 1005
>gi|380796601|gb|AFE70176.1| DNA excision repair protein ERCC-6, partial [Macaca mulatta]
Length = 1101
Score = 371 bits (952), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 323/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 90 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 139
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTAVG-- 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 140 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPP 199
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ V G+L+T+Y +R + D+ D
Sbjct: 200 FRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIR----------LMQDDISRYD-- 247
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 248 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 307
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 308 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 361
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 362 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 421
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 422 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 459
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 460 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFL 519
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 520 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 579
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 580 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 615
>gi|350592895|ref|XP_003483566.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sus scrofa]
Length = 1481
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 216/592 (36%), Positives = 323/592 (54%), Gaps = 65/592 (10%)
Query: 253 RRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGL 312
RR KL + + DD + DEG + +PG + LF +Q+ G+
Sbjct: 455 RRWNKLRLQDKEKCLKLEDDSEESDAEFDEG----------FKMPGFLFKKLFKYQQTGV 504
Query: 313 RWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPK 361
RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++ R ++V P
Sbjct: 505 RWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPT 564
Query: 362 TLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
T++ W+KE I G+ ++ ++ + G+L+T+Y +R
Sbjct: 565 TVMHQWVKEFHTWWPPFRVAILHETGSFTHKKEKLVRDIAHCHGILITSYSYIR------ 618
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
+ D+ D W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+
Sbjct: 619 ----LMQDDISRHD--WHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLR 672
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
ELW+LF+F P LG F E++ +PI G +A + + A LR+ I PY L
Sbjct: 673 ELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLL 732
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LA 597
RR+K+ DV S +L KNE +++ RLT Q ++Y+ F++S+ V +G +
Sbjct: 733 RRMKS------DVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGEMQIFS 786
Query: 598 ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHD 657
L L+KIC+HP L + G+ E+L E+D F +
Sbjct: 787 GLVALRKICNHPDLFS--GGPKNFKGIP----------GEEL--------EEDQF--GYW 824
Query: 658 NISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRV 717
S K+ + SLL +G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R
Sbjct: 825 KRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQ 884
Query: 718 KIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKK 777
++ + E +FLLT++VGGLG+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQKK
Sbjct: 885 PLITRYNEDASIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKK 944
Query: 778 DVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
V VYRL+T GT+EEKIY +QIFK L + +Q R+F DL EL +L
Sbjct: 945 QVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 996
>gi|348560752|ref|XP_003466177.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia porcellus]
Length = 1477
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 213/576 (36%), Positives = 324/576 (56%), Gaps = 66/576 (11%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 486 LEDDSEESDAEFDEG----------FKVPGFLFRKLFKYQQTGVRWLWELHCQQAGGILG 535
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPKTLLSHWIKELTA--VG 375
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 536 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTMIVCPTTVMHQWVKEFHTWWPP 595
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
I G+ ++ ++ + G+L+T+Y VR + D+ D
Sbjct: 596 FRVAILHETGSYAHRKEKLIRDIAHCHGILITSYSYVR----------LMQDDISRHD-- 643
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 644 WHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGT 703
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 704 LPVFMEQFSVPITMGGYANASPVQVKTAYRCACVLRDTINPYLLRRMKS------DVKMS 757
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 758 LSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYQILNGEMQIFSGLVALRKICNHPDLFS 817
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P++ E ++ Q + S K+ + SLL
Sbjct: 818 --GGPKNLGGL-----PDE---------------ELEEGQFGYWKRSGKMIVVESLLKIW 855
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++GY +L++DG+T + R ++ + + +FL
Sbjct: 856 HRQGQRVLLFSQSRQMLHILEVFLRARGYSYLKMDGSTTIASRQPLITRYNQDTSIFVFL 915
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQK+ V VYRL+T GT+EEK
Sbjct: 916 LTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKRQVTVYRLLTAGTIEEK 975
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 976 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1011
>gi|440902038|gb|ELR52884.1| DNA excision repair protein ERCC-6 [Bos grunniens mutus]
Length = 1488
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 228/663 (34%), Positives = 346/663 (52%), Gaps = 90/663 (13%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 472 LEDDSEESDAEFDEG----------FKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 521
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA------------------LVVAPKTLLSHWIKE 370
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 522 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRQVLLCRLFEGLGPTIIVCPTTVMHQWVKE 581
Query: 371 LTA--VGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDE 428
+ G+ ++ ++ + + G+L+T+Y +R + D+
Sbjct: 582 FHTWWPAFRVAVLHETGSFTHKKEKLVRDIARCHGILITSYSYIR----------LMQDD 631
Query: 429 AGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFC 488
D W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F
Sbjct: 632 ISRHD--WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFI 689
Query: 489 CPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFH 548
P LG F E++ +PI G +A + + A LR+ I PY LRR+K+
Sbjct: 690 FPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS---- 745
Query: 549 EDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKIC 606
DV S +L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC
Sbjct: 746 --DVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGEMQIFSGLVALRKIC 803
Query: 607 DHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFI 666
+HP L + G ++ D L E D F + S K+ +
Sbjct: 804 NHPDLFS--------GGPKNLKGIPDEELGE------------DQFG--YWKRSGKMIVV 841
Query: 667 LSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEG 726
SLL +G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E
Sbjct: 842 ESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNED 901
Query: 727 DVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMT 786
+FLLT++VGGLG+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T
Sbjct: 902 TSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLT 961
Query: 787 CGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPK--------------- 831
GT+EEKIY +QIFK L + +Q R+F DL EL +L
Sbjct: 962 AGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDTSQSTETSAIFAG 1021
Query: 832 QGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLD--TLGIAGVSHHSLLFSKTARVQVVQ 889
G DV ++ L D+S+ QF D T A +S + + + V V
Sbjct: 1022 TGSDVQTPKRHLKRRLQQACGTDQSVPVDKQFPDCKTSASAAMSSEEVCAASVSEVNAVT 1081
Query: 890 EEE 892
++
Sbjct: 1082 SDQ 1084
>gi|432112497|gb|ELK35235.1| DNA excision repair protein ERCC-6 [Myotis davidii]
Length = 1489
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 219/599 (36%), Positives = 325/599 (54%), Gaps = 72/599 (12%)
Query: 253 RRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGL 312
RR KL + + DD + DEG + +PG + LF +Q+ G+
Sbjct: 456 RRWNKLRLQDKEKCLKLEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGV 505
Query: 313 RWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA----------------- 355
RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++ R
Sbjct: 506 RWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRQVLLCRLFEGLGP 565
Query: 356 -LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYE--LQYVLQDKGVLLTTYDIV 412
++V P T++ W+KE ++ T T + E ++ + G+L+T+Y +
Sbjct: 566 TIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSYTHRKEKLIRDIAHCHGILITSYSYI 625
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGT 472
R LR D+ D W Y+ILDEGH I+NP+ + + + HRII+SG+
Sbjct: 626 R-----LR-----QDDISRHD--WHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGS 673
Query: 473 PIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
P+QNNL+ELW+LF+F P LG F E++ +PI G +A + + A LR+
Sbjct: 674 PMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRD 733
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD 592
I PY LRR+K+ DV S +L KNE +++ RLT Q ++Y+ F++S+ V +
Sbjct: 734 TINPYLLRRMKS------DVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILN 787
Query: 593 G--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
G + L L+KIC+HP D+ G K I+D ++
Sbjct: 788 GEMQVFSGLIALRKICNHP---------DLFSG------------GPKTTRGISDNEPEE 826
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
D Q H S K+ + SLL +G VL+FSQ+R+ML++++ + ++ Y +L++DGT
Sbjct: 827 D-QFGHWRRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGT 885
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T + R ++ + E +FLLT++VGGLG+ LT A+RVI+ DP WNPSTD Q+ +RA
Sbjct: 886 TTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERA 945
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
+RIGQ+K V VYRL+T GT+EEKIY +QIFK L + +Q R+F DL EL +L
Sbjct: 946 WRIGQRKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 1004
>gi|351700010|gb|EHB02929.1| DNA excision repair protein ERCC-6 [Heterocephalus glaber]
Length = 1488
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 213/583 (36%), Positives = 324/583 (55%), Gaps = 73/583 (12%)
Query: 270 LDDYSDDSVLE-DEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
L+D S++S E DEG + +PG + LF +Q+ G+RWLW LHCQ GGILG
Sbjct: 480 LEDDSEESDAEFDEG----------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG 529
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRA------------------LVVAPKTLLSHWIKE 370
D+MGLGKT+QI FLAGL +S++ R ++V P T++ W+KE
Sbjct: 530 DEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRQVLLCRLFEGLGPTIIVCPTTVMHQWVKE 589
Query: 371 LTAVGLSAK--IREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDE 428
S + I G+C ++ ++ + G+L+T+Y +R + D+
Sbjct: 590 FHTWWPSFRVAILHETGSCTHRKENLIRDIAHCHGILITSYSYIR----------LMQDD 639
Query: 429 AGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFC 488
+ W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F
Sbjct: 640 FSRQN--WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFV 697
Query: 489 CPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFH 548
P LG F E++ +PI G +A + + A LR+ I PY LRR+K+
Sbjct: 698 FPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYKCACVLRDTINPYLLRRMKS---- 753
Query: 549 EDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKIC 606
DV S +L KNE +++ RLT Q ++Y+ F+NS+ V +G + + L+KIC
Sbjct: 754 --DVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFINSKEVYKILNGEMQLFSGIVALRKIC 811
Query: 607 DHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFI 666
+HP L + L G+ P+D E+D F + S K+ +
Sbjct: 812 NHPDLFS--GGPKNLGGL-----PDDEL-------------EEDQFG--YWKRSGKMIVV 849
Query: 667 LSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEG 726
SLL +G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E
Sbjct: 850 ESLLKIWHKQGQRVLLFSQSRQMLHILEVFLRAQKYSYLKMDGTTTIASRQPLIARYNED 909
Query: 727 DVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMT 786
+FLLT++VGG+G+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQK+ V VYRL+
Sbjct: 910 ASIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKRQVTVYRLLM 969
Query: 787 CGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
GT+EEKIY +QIFK L + + R+F DL EL +L
Sbjct: 970 AGTIEEKIYHRQIFKQFLTNRVLKDPKPRRFFKSNDLYELFTL 1012
>gi|194206164|ref|XP_001500332.2| PREDICTED: DNA excision repair protein ERCC-6 [Equus caballus]
Length = 1461
Score = 368 bits (945), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 208/592 (35%), Positives = 313/592 (52%), Gaps = 88/592 (14%)
Query: 253 RRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGL 312
RR KL + + DD + DEG + +PG + LF +Q+ G+
Sbjct: 458 RRWNKLRLQNKEKCLKLEDDSEESDAEFDEG----------FKMPGFLFRKLFKYQQTGV 507
Query: 313 RWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-----------LVVAPK 361
RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++ R ++V P
Sbjct: 508 RWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPT 567
Query: 362 TLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
T++ W+KE + G+C ++ ++ + G+L+T+Y +R
Sbjct: 568 TVMHQWVKEFHTWWPPFRVAVLHETGSCTHRKEKLIRDIAHCHGILITSYSYIR------ 621
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
+ D+ D W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+
Sbjct: 622 ----LMQDDISRHD--WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLR 675
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
ELW+LF+F P LG F E++ +PI G +A + + A LR+ I PY L
Sbjct: 676 ELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYKCACVLRDTINPYLL 735
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLA 597
RR+K+ DV S +L KNE +++ RLT Q ++Y+ F++S+ V +G +
Sbjct: 736 RRMKS------DVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYGILNGDMQVFS 789
Query: 598 ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHD 657
L L+KIC+HP +
Sbjct: 790 GLVALRKICNHPGYWKR------------------------------------------- 806
Query: 658 NISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRV 717
S K+ + SLL +G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R
Sbjct: 807 --SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTVASRQ 864
Query: 718 KIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKK 777
++ + E +FLLT++VGG+G+ LT A+RVI+ DP WNPSTD Q+ +RA+RIGQKK
Sbjct: 865 PLITRYNEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKK 924
Query: 778 DVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
V VYRL+T GT+EEKIY +QIFK L + +Q R+F DL EL +L
Sbjct: 925 QVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 976
>gi|281211032|gb|EFA85198.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 1376
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 214/544 (39%), Positives = 303/544 (55%), Gaps = 56/544 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI- 352
+ +P +I + LF +Q +RW+W LH Q GGI+GD+MGLGKT+QI FLA L +S+++
Sbjct: 590 FKVPFEIYHRLFEYQVTCVRWMWELHSQESGGIIGDEMGLGKTIQIISFLASLHYSKMLC 649
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV--LQDKG-VLLTTY 409
AL++AP TLLS+W+KE+ ++ F + T+Q + Q V + KG +LLTTY
Sbjct: 650 GPALIIAPATLLSNWVKEIHKWWPPFRVI-LFHSSNNTKQTQKQLVETIATKGHILLTTY 708
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
+ VR N L W+Y+ILDEGH I+NP S+ + P+ HRII+
Sbjct: 709 EGVRINQDILLKHH------------WEYVILDEGHKIRNPDADITLSVKQFPTCHRIIL 756
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
SG+PIQN L ELW+LF+F P LG F ++ +PI G +A + + A
Sbjct: 757 SGSPIQNKLTELWSLFDFIFPGKLGTLPIFMSQFSVPINLGGYANASSLQVQTAYKCAVA 816
Query: 530 LRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLS 589
LR+ I PY LRR+K +V +L KNE ++ LT Q +LY FL+S
Sbjct: 817 LRDLISPYMLRRVKADVLQ--------SLPSKNEQVLLCPLTPFQERLYMKFLSSNEAKD 868
Query: 590 AFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
DG L A+ ILKKIC+HP D+L H D
Sbjct: 869 VMDGKKNLLYAIDILKKICNHP---------DIL--------------------HKDDDD 899
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRI 707
+ + S K+ + +L +GH VL+F QTR+ML++++E I + Y++ R+
Sbjct: 900 KDKPDDYGNVERSSKLKVVQEILPMWQQQGHKVLLFCQTRQMLDIVEEFIKNSNYQYRRM 959
Query: 708 DGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSV 767
DGTT R +V +F + IFLLT++VGGLG+ LT A+RVI+ DP WNPSTD Q+
Sbjct: 960 DGTTSIKVRQTLVEEFNNDPILFIFLLTTKVGGLGINLTGANRVILFDPDWNPSTDIQAR 1019
Query: 768 DRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELL 827
+R YRIGQKK V +YRLMT GT+EEKIY +QI+K L + Q R+F + ++LL
Sbjct: 1020 ERVYRIGQKKTVTIYRLMTTGTIEEKIYHRQIYKQFLSNKILKDPRQKRFFQSKHFKDLL 1079
Query: 828 SLPK 831
S K
Sbjct: 1080 SYVK 1083
>gi|260801499|ref|XP_002595633.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae]
gi|229280880|gb|EEN51645.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae]
Length = 1464
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/551 (37%), Positives = 309/551 (56%), Gaps = 54/551 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LPG+ N L+ +Q+ G+RWLW LH Q GGI+GD+MGLGKT+Q FL GL + +
Sbjct: 505 FKLPGETWNKLYKYQQTGVRWLWELHSQQAGGIMGDEMGLGKTIQAIVFLYGLQYGNVRN 564
Query: 354 R-----------ALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ 400
R LVVAP T+L W++E + I GT ++ ++ + +
Sbjct: 565 RGIMTKYIGLGPCLVVAPVTVLHQWVREFHTWFPRVRVAILHESGTFTTSKDRLIREIAR 624
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
D+GVL+T+Y V +LR S + + W Y+ILDEGH I+NP + + +
Sbjct: 625 DRGVLVTSYQEV-----NLRQDSLLHYD-------WHYVILDEGHKIRNPDAKVTLACKQ 672
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HRII+SG+P+QNNL+ELW+L +F P LG F E++ +PI +G +A +
Sbjct: 673 FRTPHRIILSGSPMQNNLRELWSLCDFVFPGKLGTLPVFMEQFSVPITQGGYANATPVQV 732
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ A LR+ I PY LRR+KN DV + L K+E +++ R+T Q++ Y+
Sbjct: 733 QTAYKCACVLRDTINPYLLRRMKN------DVKMNLNLPNKSEQVLFCRITEEQKEAYKD 786
Query: 581 FLNSEIVLSAFDGS--PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
+L S DG A L L+KIC+HP L+T G M+ +++ L +
Sbjct: 787 YLGSRECQQILDGQYQVFAGLITLRKICNHPDLVT--------GGPRIMVGTDESTLTK- 837
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
D + S K+ + +LL +GH VL+FSQ+++ML+L++E +
Sbjct: 838 ------------DQHYGYWKRSGKMIVVNTLLKMWHKQGHRVLLFSQSKQMLDLMEEFVQ 885
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
+ Y ++R+DGTT S R + F + +FLLT++VGGLG+ LT A+RVI+ DP W
Sbjct: 886 DQSYTYMRMDGTTTISSRQPKITKFNKDTSIFVFLLTTRVGGLGVNLTGANRVIIFDPDW 945
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQ KDV +YRL+T GT+EEKIY +QIFK L + Q R+F
Sbjct: 946 NPSTDMQARERAWRIGQSKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVLKDPRQRRFF 1005
Query: 819 SQQDLRELLSL 829
D+ EL +L
Sbjct: 1006 KSNDMYELFTL 1016
>gi|320581583|gb|EFW95803.1| DNA dependent ATPase [Ogataea parapolymorpha DL-1]
Length = 1003
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 222/588 (37%), Positives = 322/588 (54%), Gaps = 94/588 (15%)
Query: 276 DSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGK 335
D++L DE + +PG I LF +QR G++WLW L+ GGI+GD+MGLGK
Sbjct: 243 DAILNDE-----------FRVPGDIYPSLFDYQRTGVQWLWELYSHKTGGIIGDEMGLGK 291
Query: 336 TMQICGFLAGLFHS-RLIKRALVVAPKTLLSHWIKELTAV--GLSAKIREYFGTCVKTRQ 392
T+Q+ FLAGL +S +L K LVV P T+LS W KE L I GT + ++
Sbjct: 292 TVQVISFLAGLHYSGKLTKPVLVVCPATVLSQWCKEFHRWWPALRVVILHSIGTGMTGKR 351
Query: 393 YE-----------------------LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEA 429
E + V+ + V++TTY VR S+ L
Sbjct: 352 VEDSDDDEEDADLSSLPSDGRAKELVDSVINNGHVIITTYVGVRIYSRYLLPVR------ 405
Query: 430 GDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCC 489
W+Y++LDEGH I+NP + + ++ + +RII+SGTPIQNNL ELW+LF+F
Sbjct: 406 ------WNYVVLDEGHKIRNPDSHVTLACKQLKTPNRIILSGTPIQNNLVELWSLFDFVF 459
Query: 490 PELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHE 549
P LG F++++ +PI G +A + + + G A LR+ I PY LRR+K +V
Sbjct: 460 PGRLGTLPVFQKQFCVPINIGGYANATNVQVQTGYKCAVILRDLISPYLLRRVKADV--- 516
Query: 550 DDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICD 607
+ L KK+EM+++ +LT QR+LYE FLNSE + G + L + +L+KIC+
Sbjct: 517 -----AKDLPKKSEMVLFCKLTDVQRKLYEDFLNSEDINKILRGKRNALFGIDVLRKICN 571
Query: 608 HPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFIL 667
HP D +D L + AE+L + K+ +
Sbjct: 572 HP------------DLVDLKLRKKHQRTAEQLEAR-----------------AGKLQVVH 602
Query: 668 SLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYK------FLRIDGTTKASDRVKIVN 721
+LLD EG LIF+QTR+ML+++Q+ + + Y+ F+R+DGTT S R +V+
Sbjct: 603 ALLDVWFSEGRKTLIFTQTRQMLDILQDFMEALNYETESKFSFMRMDGTTPISQRQSMVD 662
Query: 722 DFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 781
F + +FLLT++VGGLG+ LT A RVI+ DP WNPSTD Q+ +RA+R+GQKKDVV+
Sbjct: 663 QFNTNPMYNVFLLTTRVGGLGVNLTGASRVIIYDPDWNPSTDVQARERAWRLGQKKDVVI 722
Query: 782 YRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
YRLM G++EEKIY +QIFK L + +Q R+F DL EL +L
Sbjct: 723 YRLMMAGSIEEKIYHRQIFKQLLTNKILKDPKQKRFFKMNDLHELFTL 770
>gi|26351187|dbj|BAC39230.1| unnamed protein product [Mus musculus]
gi|26351189|dbj|BAC39231.1| unnamed protein product [Mus musculus]
Length = 577
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 203/499 (40%), Positives = 300/499 (60%), Gaps = 46/499 (9%)
Query: 304 LFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKT 362
LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F + L+ L++ P
Sbjct: 97 LFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLSGMFDASLVNHVLLIMPTN 156
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSK---SL 419
L++ W+ E +++ + G+ R L + Q GV++TTY ++ NN + S
Sbjct: 157 LINTWVNEFAKWTPGMRVKTFHGSSKSERTRSLTRIQQRNGVVITTYQMLLNNWQQLASF 216
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
G +F +WDY+ILDE H IK+ ST+ A IP+++R++++GTP+QNNL+
Sbjct: 217 NGQAF----------VWDYVILDEAHKIKSASTKSAVCARAIPASNRLLLTGTPVQNNLQ 266
Query: 480 ELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
ELW+LF+F C LLG K FK +YE PI+R +K A EK +G +++ L E I+PYF
Sbjct: 267 ELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISENLMEIIKPYF 326
Query: 539 LRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL 582
LRR K EV + + + +L++KN++IVW+RL Q ++Y F+
Sbjct: 327 LRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPLQEEIYRKFV 386
Query: 583 NSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
+ + + L SPLA L +LKK+CDHP LL+ RA +LN A + +
Sbjct: 387 SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACR--------LLNLGTATFSAQDE 438
Query: 641 MHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQES 696
DV+ + D S K+ F++SLL++L EGH L+FSQ+ K+LN+I+
Sbjct: 439 NEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIERL 498
Query: 697 IGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVD 755
+ +K +K LRIDGT T +R K + FQ+ +FLLT+QVGG+GLTLT A RV++ D
Sbjct: 499 LKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTAATRVVIFD 558
Query: 756 PAWNPSTDNQSVDRAYRIG 774
P+WNP+TD Q+VDR YRIG
Sbjct: 559 PSWNPATDAQAVDRVYRIG 577
>gi|410975581|ref|XP_003994209.1| PREDICTED: DNA excision repair protein ERCC-6 [Felis catus]
Length = 1485
Score = 365 bits (938), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 206/552 (37%), Positives = 311/552 (56%), Gaps = 56/552 (10%)
Query: 294 YMLPGKI-GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
+ +PG + N L +Q+ G+RWLW LHCQ GGILGD+MGLGKT+QI FLAGL +S++
Sbjct: 488 FKIPGFLFKNFLSMYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIR 547
Query: 353 KRA-----------LVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVL 399
R ++V P T++ W+KE I G+ ++ ++ +
Sbjct: 548 TRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDIA 607
Query: 400 QDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLL 459
G+L+T+Y +R + D+ D W Y+ILDEGH I+NP+ +
Sbjct: 608 HCHGILITSYSYIR----------LMQDDISRHD--WHYVILDEGHKIRNPNAAVTLACK 655
Query: 460 EIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDRE 519
+ + HRII+SG+P+QNNL+ELW+LF+F P LG F E++ +PI G +A +
Sbjct: 656 QFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQ 715
Query: 520 KRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYE 579
+ A LR+ I PY LRR+K+ DV S +L KNE +++ RLT Q ++Y+
Sbjct: 716 VKTAYKCACVLRDTINPYLLRRMKS------DVKMSLSLPDKNEQVLFCRLTEEQLKVYQ 769
Query: 580 AFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAE 637
F++S+ V +G + L L+KIC+HP L + G ++ D L
Sbjct: 770 NFIDSKEVYRILNGDMQIFSGLVALRKICNHPDLFS--------GGPKNLRGIPDEEL-- 819
Query: 638 KLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESI 697
E+D F + S K+ + SLL +G VL+FSQ+R+ML++++ +
Sbjct: 820 ----------EEDQFG--YWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFL 867
Query: 698 GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPA 757
++ Y +L++DGTT + R ++ + E +FLLT++VGG+G+ LT A+RVI+ DP
Sbjct: 868 RAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPD 927
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRY 817
WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKIY +QIFK L + +Q R+
Sbjct: 928 WNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRF 987
Query: 818 FSQQDLRELLSL 829
F DL EL +L
Sbjct: 988 FKSNDLYELFTL 999
>gi|452822792|gb|EME29808.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 924
Score = 365 bits (937), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 204/537 (37%), Positives = 306/537 (56%), Gaps = 54/537 (10%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA 355
LP I + LFP+Q+ G++WLW LHCQG GGI+GD+MGLGKT+Q+ LA L +S L+
Sbjct: 190 LPADIYDRLFPYQQVGVQWLWELHCQGVGGIVGDEMGLGKTIQVIVLLASLSYSHLLPGP 249
Query: 356 L-VVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
+ +VAP TLLS W +E S ++R + + ++ +++ +L+T+Y+ VR
Sbjct: 250 VCIVAPATLLSQWKREFATWWPSFRVRIMHKSAGDGDLWIVEDIIEQGDILVTSYEQVR- 308
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
R +I WDY+ILDEGH I+NP + + HRII++G P+
Sbjct: 309 -----RFHEYILVHK------WDYVILDEGHRIRNPDAEITLVCKRFKTVHRIIMTGAPL 357
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
QN LKELW+LF+F P LG F+E++ +PI G+ +A + A LR +
Sbjct: 358 QNRLKELWSLFDFVYPGKLGTLPVFEEQFSVPITLGSYLNATPLQVHTAYKCASVLRNLV 417
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS 594
PY LRRLK +V + L KK E I++ +LT QR+LY+ +LNS + GS
Sbjct: 418 SPYLLRRLKKDV--------ALQLPKKQEQILFCKLTKEQRELYKKYLNSRELQKVLQGS 469
Query: 595 P--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
L A+++L+KIC+HP L + A E DD
Sbjct: 470 VNMLTAVSVLRKICNHPDLYDENALE-------------------------------DDR 498
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
+ + K+ + +L + VLIFSQ+R ML++++ + Y +LR+DG T
Sbjct: 499 RYGEWTRAGKLVVLDQVLLSWSKDDSRVLIFSQSRAMLDILEMFARQRRYTYLRMDGETA 558
Query: 713 ASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYR 772
+R+K+++ F + D +FLLT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+R
Sbjct: 559 MQERMKLIDSFNQDDEVFLFLLTTKVGGLGINLTGANRVVLYDPDWNPSTDLQARERAWR 618
Query: 773 IGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IGQK+DV++YRL+T GT+EEKIY +QIFK L + +Q R+F +DL +L +L
Sbjct: 619 IGQKRDVIIYRLVTSGTIEEKIYHRQIFKQLLTNKVLKDAQQTRFFRPKDLFDLFTL 675
>gi|448535812|ref|XP_003871023.1| Rad26 protein [Candida orthopsilosis Co 90-125]
gi|380355379|emb|CCG24897.1| Rad26 protein [Candida orthopsilosis]
Length = 1005
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 224/615 (36%), Positives = 334/615 (54%), Gaps = 97/615 (15%)
Query: 264 SGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGK 323
S V +D+ + SI+ S ++ LPG I LF +Q+ ++WLW L+ Q
Sbjct: 268 SSFRQVDNDHDKKEWFKPHPSISDSKLNDSFRLPGDIYPSLFDYQKTCVQWLWELYSQKT 327
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHSRLI-KRALVVAPKTLLSHWIKE------------ 370
GGI+GD+MGLGKT+QI FLAGL +S L+ K LVV P T+++ W+ E
Sbjct: 328 GGIIGDEMGLGKTIQIISFLAGLHYSGLLHKPVLVVVPATVMNQWVNEFHRWWPPLRCVI 387
Query: 371 LTAVGLS---------AKIREYFGTC-----------VKTR---QYELQYVLQDKGVLLT 407
L ++G AK+ EY T +K++ Q + V++ VL+T
Sbjct: 388 LHSIGSGMGNDAKISEAKMEEYLETWDPQTSKKSLRGIKSQINAQKIVNTVVEKGHVLIT 447
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
TY +R SK + W Y +LDEGH I+NP + + + +I + +RI
Sbjct: 448 TYVGLRIYSKYILPQE------------WGYCVLDEGHKIRNPDSDISLTCKQIKTVNRI 495
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
I+SGTPIQNNL ELW+LF+F P LG F++++ +PI G ++ + + + A
Sbjct: 496 ILSGTPIQNNLTELWSLFDFVFPGRLGTLPVFQQQFSIPINVGGYANSNNLQVKTAYKCA 555
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
LR+ I PY LRRLKN+V + L KK+EM+++++LT Q+ LYE FL+SE +
Sbjct: 556 VVLRDLISPYLLRRLKNDV--------AKDLPKKSEMVLFVKLTRVQQDLYEKFLDSEDL 607
Query: 588 LSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
S G + L + +L+KIC+HP L+ + A MH A
Sbjct: 608 NSILRGKRNVLMGVDMLRKICNHPDLIYREAL-----------------------MHKAS 644
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG------- 698
+ S K+ + +LL EGH L+F QTR+ML+++++ +
Sbjct: 645 YGDPKK--------SGKMQVLKNLLQLWQNEGHKTLLFCQTRQMLDILEKFVSNLSLLNN 696
Query: 699 -SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPA 757
SK + +LR+DG+T S R +V++F +FLLT++VGGLG+ LT ADRVI+ DP
Sbjct: 697 ESKHFTYLRMDGSTAISQRQNLVDEFNNDPSLHVFLLTTKVGGLGVNLTGADRVIIYDPD 756
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRY 817
WNPSTD Q+ +RA+R+GQKKD+ +YRLMT G++EEKIY +QIFK L + +Q R+
Sbjct: 757 WNPSTDIQARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLQNKILKDPKQRRF 816
Query: 818 FSQQDLRELLSLPKQ 832
F DL +L +L Q
Sbjct: 817 FKNNDLHDLFTLGDQ 831
>gi|223992919|ref|XP_002286143.1| rad54-like protein [Thalassiosira pseudonana CCMP1335]
gi|220977458|gb|EED95784.1| rad54-like protein [Thalassiosira pseudonana CCMP1335]
Length = 549
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 210/553 (37%), Positives = 311/553 (56%), Gaps = 45/553 (8%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA 355
+P I + LFP+QR GLRW+W L+C G GG +GD+MGLGKT+Q+ FL + +R I
Sbjct: 25 VPAWINDRLFPYQRIGLRWMWELYCVGAGGCVGDEMGLGKTVQVSSFLGAMAANRFIDSV 84
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG---VLLTTYDIV 412
LVV P T+LSHW+ EL AV R +T YE Q G VL+TTY+ +
Sbjct: 85 LVVCPATMLSHWLSEL-AVWAPGLRRIMVHRSGETDDYEEQGADAFCGTGIVLVTTYESI 143
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGT 472
R + +SF W Y++LDEG I+NP + ++ + + +R+++SGT
Sbjct: 144 RRSPDVY--ASFD----------WSYVVLDEGQKIRNPDAEVTLAVKRLRTPNRLLMSGT 191
Query: 473 PIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
PIQN+L+ELW+LF+F P LG F+ ++ PI RG +A + ++ A LR+
Sbjct: 192 PIQNDLRELWSLFDFVFPGRLGTLPAFEAEFAEPIKRGGYSNASPMQVQLAYRCAIVLRD 251
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD 592
I PY LRR K D+ + K E +++ RL+S QR LYE +L S+ V+
Sbjct: 252 LINPYLLRRQKK------DIKEVHRMPGKTEQVLFCRLSSKQRSLYEDYLRSDEVMGVMR 305
Query: 593 GSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
GS L A+T+L+KIC+HP D ++ P+ L +D D
Sbjct: 306 GSVQLLKAVTVLRKICNHP---------------DLVVGPDGRTLDSVQEESSSD--NDD 348
Query: 651 DFQEQHDNISCKISFILSLLDKLIP----EGHNVLIFSQTRKMLNLIQESIGSKGYKFLR 706
D D ++S L +L K++P +GH ++F Q RK LN+I++ + +KF R
Sbjct: 349 DGCFYGDERFVEVSGKLQVLAKILPLWHKQGHRFILFCQWRKTLNIIEQFTRKQNWKFAR 408
Query: 707 IDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
+DG T + R K+V+ F + L+T++ GG+GL +T A+RV++ DP WNP TD Q+
Sbjct: 409 LDGNTNVASRQKLVDKFNNDESYFCMLMTTRTGGVGLNVTGANRVVIFDPDWNPQTDAQA 468
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLREL 826
+RA+R GQKKDV VYRL+T GT+EEKIY++QIFK + + +Q R FSQ+DL++L
Sbjct: 469 RERAWRFGQKKDVTVYRLITAGTIEEKIYQRQIFKTAITNQVLQDPKQRRLFSQKDLKDL 528
Query: 827 LSLPKQGFDVSLT 839
+L D + T
Sbjct: 529 FTLKADSIDSTET 541
>gi|449018067|dbj|BAM81469.1| DNA repair and recombination protein RAD26 [Cyanidioschyzon merolae
strain 10D]
Length = 917
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 217/551 (39%), Positives = 311/551 (56%), Gaps = 54/551 (9%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK-R 354
LP + LFP+Q+EGL WLWSLH QG GGILGD+MGLGKT+QI FLA L +S L+K
Sbjct: 179 LPRSLYERLFPYQKEGLVWLWSLHVQGTGGILGDEMGLGKTVQIIAFLAALDYSGLLKGP 238
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ-YVLQDKGVLLTTYDIVR 413
LVVAP T+L W +EL ++R + + LQ + + +T Y+ +R
Sbjct: 239 ILVVAPVTVLDQWRRELETWWPRLQVR-VLHAVLGIGESALQPNQCPSQVIFITNYEHLR 297
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
+ S F S WDY+ILDEGH I+NP + + ++ + HRI+++G P
Sbjct: 298 -----IHASWFTSRR-------WDYVILDEGHRIRNPEAEVTRVCKQLNTVHRILMTGAP 345
Query: 474 IQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRER 533
+QN L ELW+LF+F P LG + F+E++ +PI G +A + I A LR+
Sbjct: 346 LQNRLCELWSLFDFIYPGRLGTLQSFEEEFSIPISLGGFANATPAQVHIAYRCASTLRDL 405
Query: 534 IQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG 593
I PY LRRLK +V + L +K E ++ RLT QR++Y+ +LN+ V A DG
Sbjct: 406 IAPYLLRRLKRDV--------ALQLPQKQEHVLLCRLTPEQRRIYQNYLNAIDVERAADG 457
Query: 594 --SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
+ L +T L+KIC+HP L AA D +H++ K
Sbjct: 458 QLNLLPIITTLRKICNHPRL----AAAD---------------------LHVSGSERKLL 492
Query: 652 FQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTT 711
Q + S K+ + LL +L H LIFSQTR ML L+++++ + +LR+DG T
Sbjct: 493 RQ----STSGKLLALDRLLHQLRETNHRALIFSQTRSMLTLLEKTLNKGQFTYLRMDGET 548
Query: 712 KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
+ R ++V+ F FLLT++VGGLGL L ADRVI+ DP WNP++D Q+ +RA+
Sbjct: 549 NVALRAELVDRFNHDSSIFAFLLTTRVGGLGLNLIGADRVIIYDPDWNPASDTQARERAW 608
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPK 831
RIGQ++ VVVYRL+T GT+EEKIY +QIFK L + + R+F ++D+ ELL+L +
Sbjct: 609 RIGQERPVVVYRLLTRGTIEEKIYHRQIFKTFLSEKVLHDPRKRRFFKRKDIHELLTLHE 668
Query: 832 QGFDVSLTQQQ 842
D Q Q
Sbjct: 669 DATDEDFVQVQ 679
>gi|156379234|ref|XP_001631363.1| predicted protein [Nematostella vectensis]
gi|156218402|gb|EDO39300.1| predicted protein [Nematostella vectensis]
Length = 560
Score = 362 bits (929), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 206/500 (41%), Positives = 300/500 (60%), Gaps = 57/500 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
++L ++ L+P+Q+EGL W W L+ + +GGILGDDMGLGKT+Q+ FLAG+F S LIK
Sbjct: 77 FLLARELSTALYPYQKEGLLWFWKLYNRNQGGILGDDMGLGKTIQVIAFLAGMFDSELIK 136
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVR 413
AL+V P +L+++W KE ++ Y G+ + R L+ + + GV LTTY +V
Sbjct: 137 SALIVMPVSLITNWEKEFKKWAPGIRVYPYHGSNKRERLKNLEKIQRKNGVCLTTYGLVV 196
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
++ ++L S + D WDY+ILDEGH IKN T+ +K++ IP+ H I++GTP
Sbjct: 197 SSHEAL------SQTSTGKDYQWDYIILDEGHKIKN-VTKTSKNVRAIPAKHHFILTGTP 249
Query: 474 IQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
IQNNL+E+WALF+F C +LLG +K FK++YE PI R ++ A EKRIG +A+ LR+
Sbjct: 250 IQNNLREMWALFDFTCQGQLLGSSKTFKQEYESPITRARERDASAYEKRIGGEMAESLRK 309
Query: 533 RIQPYFLRRLKNEVF-------------HEDDVTSSAT------------LSKKNEMIVW 567
IQP+FLRR K V E+ + S + L +KN++I+W
Sbjct: 310 LIQPHFLRRTKAMVLKNTKKEEEGTIKEREEQIDGSQSIPKMPSAKAPEGLKRKNDLIIW 369
Query: 568 LRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L+++ Q ++Y FL E V SPLA L +LKKICDHP LL+ A +
Sbjct: 370 LQMSDTQLKIYSDFLGLERVKEMLMSTRSPLAELNVLKKICDHPRLLSAMACTQL----- 424
Query: 626 SMLNPEDAALAEK------LAMHIAD----VAEKDDFQEQHDNISCKISFILSLLDKLIP 675
LN D A+ ++ L + ++D +++ QE S K+ F++ LLD L
Sbjct: 425 -GLNERDRAIIDEEDKENHLEVDLSDGSSGPSDQTLIQE-----SGKMVFLVELLDNLRE 478
Query: 676 EGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLL 734
+GH LIFSQ+RKML++IQ I +G+K LRIDGT T S+R ++N FQ+ FLL
Sbjct: 479 QGHRCLIFSQSRKMLDIIQRVITHRGHKVLRIDGTITSTSERQHLINTFQKNSSYTCFLL 538
Query: 735 TSQVGGLGLTLTKADRVIVV 754
T+QVGG+G+TLT ADRV++
Sbjct: 539 TTQVGGVGITLTAADRVVIC 558
>gi|358341364|dbj|GAA49064.1| DNA excision repair protein ERCC-6 [Clonorchis sinensis]
Length = 1267
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 206/567 (36%), Positives = 314/567 (55%), Gaps = 56/567 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI- 352
+++PG+I + LF +QR G+ WLW LH + GGILGD+MGLGKT+QI FLAGL +S +
Sbjct: 139 FLVPGRIWSRLFEYQRTGVNWLWQLHQKQSGGILGDEMGLGKTIQIIAFLAGLHYSEFLV 198
Query: 353 --------------------KRALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKT 390
AL+V P T+L W++E + I G+ +
Sbjct: 199 TGKSGHLGPGPSHRHSTGDFASALIVCPATVLQQWLREFHQWYPAMRVAILHSTGSGYQK 258
Query: 391 RQYELQYVLQDKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
++ + G VLLTTY + L + W Y+ILDEGH IKN
Sbjct: 259 PNSLIRSMGNHPGSVLLTTYQTLVTYQDVLTAV----------EPSWTYLILDEGHKIKN 308
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
P + ++ ++HR+I+SG+P+QNNL+ELW+LF+F P LG F +++ +PI +
Sbjct: 309 PEAEVTHAVKRFATSHRLILSGSPMQNNLRELWSLFDFVSPGRLGPLPEFMQQFAIPITQ 368
Query: 510 GNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR 569
G A + A LR+ + P+ +RRLK +V L K+E +++ R
Sbjct: 369 GGYASASPLQVETAYRCACTLRDLLMPFLIRRLKTDV--------QIQLPAKSEQVLFCR 420
Query: 570 LTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSM 627
LT+ QRQLY F S++ +G + AL +L+K+C+HP L+T + +L G D +
Sbjct: 421 LTNYQRQLYREFAESQLCKDLLNGKGNVFTALILLRKLCNHPDLVTGGPRDHILLG-DEL 479
Query: 628 LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
PED + ++ ++E + S K+ + SLL +GH VL+FSQ+R
Sbjct: 480 --PED----DVDVTTVSRISEYGWTRFGCPRRSSKMLVVASLLRTWSTQGHKVLLFSQSR 533
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-----IFLLTSQVGGLG 742
+ML L++ + + G +LR+DG+T S R +++ F + +FLLT++VGGLG
Sbjct: 534 RMLCLLERLLITLGITYLRMDGSTPVSQRPALIDRFNRSTDSSAENIFVFLLTTRVGGLG 593
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
+ LT A+RV++ DP WNP TD Q+ +RA+RIGQ +DV++YRL+T GT+EEKIY +QIFK
Sbjct: 594 INLTAANRVLIFDPDWNPMTDLQARERAWRIGQTQDVIIYRLLTSGTIEEKIYHRQIFKQ 653
Query: 803 GLFKTATEHKEQIRYFSQQDLRELLSL 829
L ++ Q R+F DL+ELLS
Sbjct: 654 FLTNRVLKNPRQQRFFKTNDLQELLSF 680
>gi|405953464|gb|EKC21121.1| DNA excision repair protein ERCC-6 [Crassostrea gigas]
Length = 1410
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/552 (36%), Positives = 302/552 (54%), Gaps = 57/552 (10%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
+P +I + LF +QR G+ WLW LHCQ GGI+GD+MGLGKT+Q+ FLA L S+L +
Sbjct: 435 VPSRIWSKLFNYQRVGVSWLWELHCQSAGGIIGDEMGLGKTIQMIAFLAALRQSKLASKH 494
Query: 355 --------ALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQYELQYVLQDKGV 404
++V P T++S W+KE I G+ + + +++D+GV
Sbjct: 495 FKYCGLGPVIIVTPTTVMSQWVKEFHKWWPLFRVAILHSSGSFTGAEEDLIWSIVKDRGV 554
Query: 405 LLTTYD-IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
L+T++ +V + K L W Y++LDEGH I+NP Q ++ + +
Sbjct: 555 LITSFTTLVVHQDKVLPYD-------------WHYVVLDEGHKIRNPDAQVTQACKQFRT 601
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
HRII+SG+PIQNNLKELW+LF+F P LG F + + +PI++G +A + + +
Sbjct: 602 PHRIILSGSPIQNNLKELWSLFDFVFPGKLGTLPDFLQHFSIPIVQGGYANATEIQVQTA 661
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
A LR+ I PY LRR+K +V L KNE +++ RLT QR +Y +L
Sbjct: 662 YKCACVLRDTINPYLLRRMKADV--------KIDLPSKNEQVLFCRLTDEQRDVYLEYLQ 713
Query: 584 SEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAM 641
S + G A L L+KIC+HP + T +L G D+ +P
Sbjct: 714 SRECQAILSGKYQIFAGLITLRKICNHPDICT--GGPKLLIGEDTQGDPT---------- 761
Query: 642 HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKG 701
+ + S K+ + +LL +GH VL+FSQ+R ML++ + + ++
Sbjct: 762 ----------LEYGYWKRSGKMIVVEALLKLWKQQGHRVLLFSQSRAMLDIFESFVQNQK 811
Query: 702 YKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
Y +LR+DG T S R ++ + + +FLLT++VGGLG+ LT A+RVI+ DP WNPS
Sbjct: 812 YCYLRMDGGTPISSRQALITTYNQDPSIYLFLLTTRVGGLGVNLTGANRVIIFDPDWNPS 871
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQ 821
TD Q+ +R +RIGQ K V +YRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 872 TDTQARERTWRIGQTKQVTIYRLLTSGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSN 931
Query: 822 DLRELLSLPKQG 833
DL EL L +G
Sbjct: 932 DLYELFELGSKG 943
>gi|448116169|ref|XP_004202990.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
gi|359383858|emb|CCE79774.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
Length = 1116
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 216/609 (35%), Positives = 333/609 (54%), Gaps = 100/609 (16%)
Query: 272 DYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDM 331
DY+ + + +I+ + ++ LPG I LF +Q+ ++WLW L+ Q GGI+GD+M
Sbjct: 284 DYNTEECFKVHPTISDAVLNDSFRLPGDIYPSLFDYQKTCVQWLWELYTQKTGGIIGDEM 343
Query: 332 GLGKTMQICGFLAGLFHS-RLIKRALVVAPKTLLSHWIKE------------LTAVG--- 375
GLGKT+Q+ F+AGL +S RL L+V P T+L+ W+ E L ++G
Sbjct: 344 GLGKTIQVISFIAGLHYSKRLEDPVLIVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGM 403
Query: 376 ---------------LSAKIREYFGTCVKTRQYELQY------VLQDKGVLLTTYDIVRN 414
+A + +K+ + EL+ V Q +L+TTY +R
Sbjct: 404 NKALISKEEKMEELLENADPFSVNKSSLKSYENELKAKDIVDSVFQKGHILITTYVGLRI 463
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
SK + W Y ILDEGH I+NP ++ + + +I + +R+I+SGTPI
Sbjct: 464 YSKYILPRK------------WGYAILDEGHKIRNPDSEVSLTCKQIKTYNRVILSGTPI 511
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
QNNL ELW+LF+F P LG F++++ +PI G +A + + + G A LR+ I
Sbjct: 512 QNNLIELWSLFDFVFPGRLGTLPVFQQQFAVPINMGGYANASNVQVQTGYKCAVILRDLI 571
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG- 593
PY LRRLK++V + L KKNEM+++++LT Q+QLYE FL+SE V + G
Sbjct: 572 SPYLLRRLKSDVARD--------LPKKNEMVLFVKLTEYQQQLYEKFLDSEDVSAILKGK 623
Query: 594 -SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
+ L + IL+KIC+HP L+ + D+L + + ++
Sbjct: 624 RNVLMGVDILRKICNHPDLIDR----DIL-------------------------SHRRNY 654
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGS------------K 700
S K+ + +LL EGH L+F QTR+ML+++++ +G+
Sbjct: 655 NYGDPRKSGKLQVLKNLLQLWKKEGHRTLLFCQTRQMLDILEKFVGNLKSISDEGDDIDG 714
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
+ +LR+DG+T + R +V+ F + +FLLT++VGGLG+ LT ADRVI+ DP WNP
Sbjct: 715 KFNYLRMDGSTPIAVRQSLVDTFNNNNYYHVFLLTTKVGGLGINLTGADRVIIYDPDWNP 774
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQ 820
STD Q+ +RA+R+GQKKD+ +YRLMT G++EEKIY +QIFK L + +Q R+F
Sbjct: 775 STDIQARERAWRLGQKKDITIYRLMTAGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFRM 834
Query: 821 QDLRELLSL 829
DL +L SL
Sbjct: 835 NDLHDLFSL 843
>gi|330801436|ref|XP_003288733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum]
gi|325081209|gb|EGC34733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum]
Length = 1544
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 212/545 (38%), Positives = 303/545 (55%), Gaps = 58/545 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
+ +P I LF +Q G+RWL+ LHCQ GGI+GD+MGLGKT+QI FLA L +SR L
Sbjct: 717 FKIPFDIYKNLFEYQVTGVRWLYELHCQEAGGIVGDEMGLGKTIQIVSFLASLHYSRRLG 776
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG-VLLTTYDI 411
AL+VAP TLLS+W+KE ++ + + + ++ + KG +LLTT++
Sbjct: 777 GPALIVAPATLLSNWVKEFHKWWPPFRVGLFHSSSSSLSKDDIVKKIASKGHILLTTFEQ 836
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
+R + L + WDY+ILDEGH I+NP + S + + HRII+SG
Sbjct: 837 IRIHQDILL------------EHHWDYVILDEGHKIRNPDAEVTLSCKQFQTCHRIILSG 884
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
+PIQN L ELW+LF+F P LG FK ++ LPI G +A + + A LR
Sbjct: 885 SPIQNKLTELWSLFDFVYPGKLGTLPIFKTQFSLPISVGGFANASPIQVQTAYKCAVALR 944
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
+ I PY LRR+K +V +L KNE ++ LT+ Q +LY FL+S + S
Sbjct: 945 DLISPYMLRRIKADVL--------KSLPSKNEQVLMCPLTNFQEKLYLEFLDSNDIKSVL 996
Query: 592 DG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEK 649
+G + L + ILKKI +HP +L ++P D
Sbjct: 997 EGRRNALYGIDILKKISNHPDIL--------------HMDPHD----------------- 1025
Query: 650 DDFQEQHDNI--SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESI-GSKGYKFLR 706
+D E + NI S K+ + +L +G VL+F QTR+ML++++ I S + +LR
Sbjct: 1026 EDRPEDYGNINRSAKLRVVDQILPLWYKQGDKVLLFCQTRQMLDIVEAYIRNSTTFNYLR 1085
Query: 707 IDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
+DGTT R +V +F + IFLLT++VGGLGL LT A+RVI+ DP WNPSTD Q+
Sbjct: 1086 MDGTTSVKHRQSLVEEFNLDEKLFIFLLTTKVGGLGLNLTGANRVILFDPDWNPSTDTQA 1145
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLREL 826
+R YRIGQKK V +YRL+T GT+EEKIY +QI+K L + Q R+F + +EL
Sbjct: 1146 RERVYRIGQKKSVTIYRLVTLGTIEEKIYHRQIYKQFLTNKILKDPRQKRFFKSKHFKEL 1205
Query: 827 LSLPK 831
+ K
Sbjct: 1206 FTYSK 1210
>gi|242002592|ref|XP_002435939.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis]
gi|215499275|gb|EEC08769.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis]
Length = 982
Score = 359 bits (922), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 200/536 (37%), Positives = 299/536 (55%), Gaps = 54/536 (10%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL---------IKRALV 357
+Q+ G+RWLW LH Q GGI+GD+MGLGKT+Q F AGL HS L + ++
Sbjct: 2 YQQTGVRWLWELHRQNTGGIVGDEMGLGKTIQTIAFFAGLHHSNLRTLGDSFQGLGPVVL 61
Query: 358 VAPKTLLSHWIKELT--AVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
+ P T++ W++E + I G+ +++ ++ V +D+GVL+T+Y V
Sbjct: 62 ICPTTVMHQWVREFHRWYPPVRVAILHDSGSFAGSKETLVRQVNRDRGVLVTSYAGVSKL 121
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
S L + E W Y++LDEGH I+NP Q + + + HRII+SG+PIQ
Sbjct: 122 SPML-----LRHE-------WHYVVLDEGHKIRNPDAQTTLACKQFRTTHRIILSGSPIQ 169
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
NNL+ELW+LF+F P LG F +++ +PI +G +A D + A LR+ I+
Sbjct: 170 NNLRELWSLFDFVFPGKLGTLPVFMQEFAVPITQGGYSNATDVQ--TAYKCASVLRDTIK 227
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG-- 593
PY LRR+K DDV + L KKNE +++ RLT QR LY +L++ + S G
Sbjct: 228 PYLLRRMK------DDVQCNLQLPKKNEQVLFCRLTDHQRDLYRQYLDTPEIASILVGRL 281
Query: 594 SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQ 653
L L+KIC+HP D+ DG + D + + +
Sbjct: 282 QVFVGLINLRKICNHP---------DLFDGGPKVFKDTDLSTLPA------------EMR 320
Query: 654 EQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKA 713
S K++ + SLL +GH VL+F+Q+R+ML ++++ + +GYK++ + G+T
Sbjct: 321 YGFPGRSGKMAVVESLLKLWKRQGHRVLLFTQSRQMLLILEKFVQDQGYKYMVMTGSTPI 380
Query: 714 SDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRI 773
+ R +N F +FLLT++VGGLG+ LT ADRV++ DP WNPSTD Q+ +RA+RI
Sbjct: 381 ASRQPAINKFNADTSVFVFLLTTRVGGLGVNLTGADRVVIYDPDWNPSTDTQARERAWRI 440
Query: 774 GQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
GQ +DV +YRL+T GT+EEKIY +QIFK L + +Q R+F DL EL L
Sbjct: 441 GQLRDVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKTNDLHELFCL 496
>gi|392512974|emb|CAD27013.2| RAD26-LIKE DNA REPAIR AND RECOMBINATION PROTEIN [Encephalitozoon
cuniculi GB-M1]
Length = 687
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 320/562 (56%), Gaps = 61/562 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + + LFP+Q++G+RW+ L+ KGG+L DDMGLGKT+Q+ FL L HSR++
Sbjct: 133 FSVPGFLWSSLFPYQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVIVFLGALLHSRVVS 192
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD-KGVLLTTYDIV 412
+AL++ P T++S W+ E +R +FG + +D +GV L +Y+
Sbjct: 193 KALILCPATIVSQWMDEWKR--FYPFVRIFFG-----------FPNEDCEGVYLMSYEKF 239
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGT 472
+ AG + +WD +ILDEGH IKN + Q S+ + S R ++SGT
Sbjct: 240 K---------------AGVKNFLWDVLILDEGHRIKNKNAQITLSVKKARSRGRFVLSGT 284
Query: 473 PIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
PIQNNL ELW++F+F P LLG + F E++E I RG ++A + + + LR
Sbjct: 285 PIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRS 344
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD 592
I+PY LRR K++V H+ L K + IV+ LT Q +LY L S+ ++
Sbjct: 345 LIEPYILRRTKSQVSHK--------LPSKEDKIVFCSLTPAQIELYNRVLESKHIMKVLT 396
Query: 593 GSP--LAALTILKKICDHPLLLTKR---AAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
G L+ +++L+K+C+HP LL R +ED + N ED AL + ADV+
Sbjct: 397 GKANLLSGISMLRKVCNHPRLLFPRKLGVSEDCEEEASDEKNGEDEALE----LPGADVS 452
Query: 648 EKDDFQEQHDNIS--CKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
+D +S CKI ++ LL K EG+ VL+FSQT +ML++I+ + + Y +L
Sbjct: 453 --------YDLVSSSCKIKILVDLLKKWRSEGNKVLVFSQTIRMLDIIERCV--RKYTYL 502
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
R+DG T S R +V+ F E + +FLLT++VGGLGL LT A R+++ DP WNPSTD Q
Sbjct: 503 RMDGRTPTSSRPGLVDRFNEDEDVFLFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQ 562
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRE 825
+ +RA+R GQKK V +YR + T+EEK+Y+KQIFK L K + R+F++ + E
Sbjct: 563 AKERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLSNPRLSRFFNKSCINE 622
Query: 826 LLSLPKQGFDVSLTQQQLHEEH 847
L S G L + + HE H
Sbjct: 623 LFSFTMTG---DLVEVKTHEVH 641
>gi|85014197|ref|XP_955594.1| DNA repair and recombination protein [Encephalitozoon cuniculi
GB-M1]
Length = 695
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 320/562 (56%), Gaps = 61/562 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + + LFP+Q++G+RW+ L+ KGG+L DDMGLGKT+Q+ FL L HSR++
Sbjct: 141 FSVPGFLWSSLFPYQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVIVFLGALLHSRVVS 200
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD-KGVLLTTYDIV 412
+AL++ P T++S W+ E +R +FG + +D +GV L +Y+
Sbjct: 201 KALILCPATIVSQWMDEWKR--FYPFVRIFFG-----------FPNEDCEGVYLMSYEKF 247
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGT 472
+ AG + +WD +ILDEGH IKN + Q S+ + S R ++SGT
Sbjct: 248 K---------------AGVKNFLWDVLILDEGHRIKNKNAQITLSVKKARSRGRFVLSGT 292
Query: 473 PIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
PIQNNL ELW++F+F P LLG + F E++E I RG ++A + + + LR
Sbjct: 293 PIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRS 352
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD 592
I+PY LRR K++V H+ L K + IV+ LT Q +LY L S+ ++
Sbjct: 353 LIEPYILRRTKSQVSHK--------LPSKEDKIVFCSLTPAQIELYNRVLESKHIMKVLT 404
Query: 593 GSP--LAALTILKKICDHPLLLTKR---AAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
G L+ +++L+K+C+HP LL R +ED + N ED AL + ADV+
Sbjct: 405 GKANLLSGISMLRKVCNHPRLLFPRKLGVSEDCEEEASDEKNGEDEALE----LPGADVS 460
Query: 648 EKDDFQEQHDNIS--CKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
+D +S CKI ++ LL K EG+ VL+FSQT +ML++I+ + + Y +L
Sbjct: 461 --------YDLVSSSCKIKILVDLLKKWRSEGNKVLVFSQTIRMLDIIERCV--RKYTYL 510
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
R+DG T S R +V+ F E + +FLLT++VGGLGL LT A R+++ DP WNPSTD Q
Sbjct: 511 RMDGRTPTSSRPGLVDRFNEDEDVFLFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQ 570
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRE 825
+ +RA+R GQKK V +YR + T+EEK+Y+KQIFK L K + R+F++ + E
Sbjct: 571 AKERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLSNPRLSRFFNKSCINE 630
Query: 826 LLSLPKQGFDVSLTQQQLHEEH 847
L S G L + + HE H
Sbjct: 631 LFSFTMTG---DLVEVKTHEVH 649
>gi|449329940|gb|AGE96207.1| rad26-like DNA repair and recombination protein [Encephalitozoon
cuniculi]
Length = 695
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 320/562 (56%), Gaps = 61/562 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG + + LFP+Q++G+RW+ L+ KGG+L DDMGLGKT+Q+ FL L HSR++
Sbjct: 141 FSVPGFLWSSLFPYQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVIVFLGALLHSRVVS 200
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD-KGVLLTTYDIV 412
+AL++ P T++S W+ E +R +FG + +D +GV L +Y+
Sbjct: 201 KALILCPATIVSQWMDEWKR--FYPFVRIFFG-----------FPNEDCEGVYLMSYEKF 247
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGT 472
+ AG + +WD +ILDEGH IKN + Q S+ + S R ++SGT
Sbjct: 248 K---------------AGVKNFLWDVLILDEGHRIKNKNAQITLSVKKARSRGRFVLSGT 292
Query: 473 PIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
PIQNNL ELW++F+F P LLG + F E++E I RG ++A + + + LR
Sbjct: 293 PIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRS 352
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD 592
I+PY LRR K++V H+ L K + IV+ LT Q +LY L S+ ++
Sbjct: 353 LIEPYILRRTKSQVSHK--------LPSKEDKIVFCSLTPAQIELYNRVLESKHIMKVLT 404
Query: 593 GSP--LAALTILKKICDHPLLLTKR---AAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
G L+ +++L+K+C+HP LL R +ED + N ED AL + ADV+
Sbjct: 405 GKANLLSGISMLRKVCNHPRLLFPRKLGVSEDCEEEASDEKNGEDEALE----LPGADVS 460
Query: 648 EKDDFQEQHDNIS--CKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
+D +S CKI ++ LL K EG+ VL+FSQT +ML++I+ + + Y +L
Sbjct: 461 --------YDLVSSSCKIKILVDLLKKWRSEGNKVLVFSQTIRMLDIIERCV--RKYTYL 510
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
R+DG T S R +V+ F E + +FLLT++VGGLGL LT A R+++ DP WNPSTD Q
Sbjct: 511 RMDGRTPTSSRPGLVDRFNEDEDVFLFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQ 570
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRE 825
+ +RA+R GQKK V +YR + T+EEK+Y+KQIFK L K + R+F++ + E
Sbjct: 571 AKERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLSNPRLSRFFNKSCINE 630
Query: 826 LLSLPKQGFDVSLTQQQLHEEH 847
L S G L + + HE H
Sbjct: 631 LFSFTMTG---DLVEVKTHEVH 649
>gi|448113515|ref|XP_004202370.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
gi|359465359|emb|CCE89064.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
Length = 1117
Score = 358 bits (920), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 212/588 (36%), Positives = 325/588 (55%), Gaps = 100/588 (17%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
++ LPG I LF +Q+ ++WLW L+ Q GGI+GD+MGLGKT+QI F+AGL +S+L+
Sbjct: 306 SFRLPGDIYPSLFDYQKTCVQWLWELYTQKTGGIIGDEMGLGKTIQIISFIAGLHYSKLL 365
Query: 353 K-RALVVAPKTLLSHWIKE------------LTAVG------------------LSAKIR 381
+ L+V P T+L+ W+ E L ++G +A
Sbjct: 366 EDPVLIVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGMNKALVSKEEKMEELLENADPF 425
Query: 382 EYFGTCVKTRQYELQY------VLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
+ +K+ + EL+ V Q +L+TTY +R SK +
Sbjct: 426 AVNKSSLKSYENELKAKEIVDSVFQKGHILITTYVGLRIYSKYILPRK------------ 473
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y ILDEGH I+NP + + + +I + +R+I+SGTPIQNNL ELW+LF+F P LG
Sbjct: 474 WGYAILDEGHKIRNPDSDVSLTCKQIKTYNRVILSGTPIQNNLIELWSLFDFVFPGRLGT 533
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F++++ +PI G +A + + + G A LR+ I PY LRRLK++V +
Sbjct: 534 LPVFQQQFAVPINMGGYANASNVQVQTGYKCAVILRDLISPYLLRRLKSDVARD------ 587
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLT 613
L KKNEM+++++LT Q+QLYE F++SE V + G + L + IL+KIC+HP L+
Sbjct: 588 --LPKKNEMVLFVKLTEYQQQLYEKFIDSEDVSAILKGKRNVLMGVDILRKICNHPDLID 645
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
+ D+L + + ++ S K+ + +LL
Sbjct: 646 R----DIL-------------------------SHRRNYNYGDPRKSGKLQVLKNLLQLW 676
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGS------------KGYKFLRIDGTTKASDRVKIVN 721
EGH L+F QTR+ML+++++ +G+ + +LR+DG+T + R +V+
Sbjct: 677 KKEGHRTLLFCQTRQMLDILEKFVGNLKSINDEGDDIDGKFNYLRMDGSTPIAVRQSLVD 736
Query: 722 DFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 781
F + +FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQKKD+ +
Sbjct: 737 TFNNNNYCHVFLLTTKVGGLGINLTGADRVIIYDPDWNPSTDIQARERAWRLGQKKDITI 796
Query: 782 YRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
YRLMT G++EEKIY +QIFK L + +Q R+F DL +L SL
Sbjct: 797 YRLMTAGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFRMNDLHDLFSL 844
>gi|149235383|ref|XP_001523570.1| DNA repair and recombination protein RAD26 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452979|gb|EDK47235.1| DNA repair and recombination protein RAD26 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 1159
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 218/586 (37%), Positives = 319/586 (54%), Gaps = 97/586 (16%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
T+ LPG I LF +Q+ ++WLW L+ Q GGI+GD+MGLGKT+QI F+AGL +S L+
Sbjct: 318 TFKLPGDIYPSLFDYQKTCVQWLWELYLQKTGGIIGDEMGLGKTIQIISFIAGLHYSGLL 377
Query: 353 KR-ALVVAPKTLLSHWIKEL--------------TAVGLSA-------KIREYF------ 384
++ LVV P T+L+ W+ E G+S K+ E+
Sbjct: 378 EKPVLVVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGMSKDKKISEEKLEEFMEDWDPK 437
Query: 385 -------GTCVKTRQYELQYVLQDKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIW 436
G + E+ +Q+KG VL+TTY +R SK + W
Sbjct: 438 TSKSSLKGIKSQINAREILDKVQEKGHVLVTTYVGLRMYSKYILPRQ------------W 485
Query: 437 DYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDN 496
Y ILDEGH I+NP + + + +I + +R+I+SGTPIQNNL ELW+LF+F P LG
Sbjct: 486 GYCILDEGHKIRNPDSDISLTCKQIKTVNRVILSGTPIQNNLTELWSLFDFVFPGRLGTL 545
Query: 497 KWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSA 556
F++++ +PI G ++ + + + A LR+ I PY LRRLK +V +
Sbjct: 546 PVFEQQFSVPIKIGGYANSNNLQVKTAYKCAVVLRDLISPYLLRRLKKDVAQD------- 598
Query: 557 TLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTK 614
L KKNEM++++RLT Q++LYE FL+SE + S G + L + L+KIC+HP L+ +
Sbjct: 599 -LPKKNEMVLFVRLTKEQQELYEKFLDSEEMDSIVKGKRNVLVGVDTLRKICNHPDLIYR 657
Query: 615 RAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLI 674
A MH A+ + S K+ + +LL
Sbjct: 658 EAL-----------------------MHRANYGDPSK--------SGKMQVLKNLLQLWQ 686
Query: 675 PEGHNVLIFSQTRKMLNLIQESIG--------SKGYKFLRIDGTTKASDRVKIVNDFQEG 726
E H L+F QTR+ML+++++ + SK + +LR+DG T S R ++V+ F
Sbjct: 687 SEDHKTLLFCQTRQMLDILEKFVANLHLLGDESKKFNYLRMDGNTPISRRQQLVDTFNNS 746
Query: 727 DVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMT 786
+FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQKKD+ +YRLMT
Sbjct: 747 PDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKKDITIYRLMT 806
Query: 787 CGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQ 832
G++EEKIY +QIFK L + +Q R F DL +L SL Q
Sbjct: 807 TGSIEEKIYHRQIFKTFLQNKILKDPKQRRLFKNSDLHDLFSLGDQ 852
>gi|66813000|ref|XP_640679.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
gi|60468700|gb|EAL66702.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
Length = 1655
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 215/549 (39%), Positives = 304/549 (55%), Gaps = 60/549 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
+ +P I LF +Q +RWL+ LHCQ GGI+GD+MGLGKT+QI FLA L +SR L
Sbjct: 785 FKIPFDIYKNLFEYQVTCVRWLYELHCQETGGIVGDEMGLGKTVQIVSFLASLHYSRRLG 844
Query: 353 KRALVVAPKTLLSHWIKELTA------VGLSAKIREYFGTCVKTRQYELQYVLQDKG-VL 405
AL+VAP TLLS+WIKE VGL G + + ++ + +KG +L
Sbjct: 845 GPALIVAPATLLSNWIKEFHKWWPPFRVGLFHSSGSGGGGNDGSDKEDIVKKIAEKGHIL 904
Query: 406 LTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH 465
LTT+D +R N + L W+Y+ILDEGH I+NP + S ++ + H
Sbjct: 905 LTTFDSIRINQEILLKYH------------WEYVILDEGHKIRNPDAEITLSCKQLQTPH 952
Query: 466 RIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSA 525
R+I+SG+PIQN L ELW+LF+F P LG FK ++ LPI G +A + +
Sbjct: 953 RVILSGSPIQNKLTELWSLFDFVFPGRLGTLPIFKSQFSLPISVGGFANASPIQVQAAYK 1012
Query: 526 VAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSE 585
A LR+ I PY LRR+K++V +L KNE ++ LT Q +LY FL+S
Sbjct: 1013 CAVALRDLISPYMLRRVKSDVL--------KSLPSKNEQVLMCPLTPFQEKLYLEFLDSN 1064
Query: 586 IVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHI 643
+ S DG + L + ILKKIC+HP +L A+++ P D E+
Sbjct: 1065 DIKSVLDGRRNALYGIDILKKICNHPDILHMDASDED--------RPHDYGNIER----- 1111
Query: 644 ADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESI-GSKGY 702
S K+ + ++L +G VL+F QTR+ML+++++ I S +
Sbjct: 1112 ----------------SAKLKVVETILPLWFKQGDKVLLFCQTRQMLDIVEQYIRDSTQF 1155
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+LR+DGTT R +V F IFLLT++VGGLGL LT A+RVI+ DP WNPST
Sbjct: 1156 NYLRMDGTTSIRQRQCLVEQFNIDPSLFIFLLTTKVGGLGLNLTGANRVILFDPDWNPST 1215
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQD 822
D Q+ +R YRIGQKK V +YRL+T GT+EEKIY +QI+K L + Q R+F +
Sbjct: 1216 DMQARERVYRIGQKKAVTIYRLITLGTIEEKIYHRQIYKQFLTNKILKDPRQKRFFKSKH 1275
Query: 823 LRELLSLPK 831
++L + K
Sbjct: 1276 FKDLFTYTK 1284
>gi|219122179|ref|XP_002181429.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407415|gb|EEC47352.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 902
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 232/668 (34%), Positives = 354/668 (52%), Gaps = 103/668 (15%)
Query: 269 VLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILG 328
+ D S++ +L + S T +P + LF +Q+ G++W+ +LH G GG+LG
Sbjct: 130 ICDRKSNEMLLRAQESDTTEVDWPDLRIPRGLFQKLFDYQKSGVQWMGTLHQVGIGGVLG 189
Query: 329 DDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKE----LTAVGLSAKIREYF 384
DDMG+GKT FL GL + +I+ AL+V+P ++L W KE LT +I
Sbjct: 190 DDMGMGKTYMALTFLGGLMRTGVIRNALIVSPVSVLRSWEKEAQNVLTQCVHDVRIAVLS 249
Query: 385 GTCVKTRQYELQYVLQDKG---VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMIL 441
T + R L L+D+ +++T+Y VR+ + S S D +DY++L
Sbjct: 250 STQSQQRDRILLKALEDESSNYLIITSYGQVRSATLSFVQS----------DCCFDYVVL 299
Query: 442 DEGHLIKNPSTQRAKSLLEIPSA---HRIIISGTPIQNNLKELWALFNFCCP-ELLGDNK 497
DEGH IKNP++ +++ I + HR++++GTPI NNLKELWALF++ ++L K
Sbjct: 300 DEGHQIKNPTSATSRACRRICRSRETHRLLLTGTPILNNLKELWALFDWATSGQILNKLK 359
Query: 498 WFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT 557
F + PI +K+A ++G V KEL+E+++PYFL+RLK + +
Sbjct: 360 TFTNYFARPIEDARNKNATTHAIKLGQRVNKELQEKLKPYFLQRLKVDFLIDK------- 412
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSE--IVLSAFDG---SPLAALTILKKICDHPLLL 612
L KNE++VW L+S QR +Y F++S+ +V S G SPL A+T LKK+C HP+
Sbjct: 413 LPSKNELVVWTHLSSKQRTMYSDFVDSKESVVSSILSGETRSPLEAVTWLKKLCGHPI-- 470
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV---AEKDDFQEQHDNISCKISFILSL 669
LAE+LA+++ + A DD +Q S K+ +LSL
Sbjct: 471 ----------------------LAEELAINVGRLLATASPDDLVQQ----SAKLCILLSL 504
Query: 670 LDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEG-DV 728
++ GH LIFSQ+ KML++I++++ S+G + LRIDG++K DR + V+DF
Sbjct: 505 IENFRQNGHRTLIFSQSTKMLDIIEKTLLSEGVELLRIDGSSKEQDRQRFVDDFNSNTST 564
Query: 729 APIFLLTSQVGGLGLTLTKADRVIVVDPAW------------------------------ 758
LL+++ G+GLTL ADRVI+ DP+W
Sbjct: 565 TDAMLLSTKAAGVGLTLVGADRVIIYDPSWYVSEARFALQEQRHLECAIAVTLLLFSLLS 624
Query: 759 --NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQI 815
P+ D+Q+VDR YRIGQ +DVVVYRL+ GTVEEK+Y KQ+ K G+ +T TE
Sbjct: 625 NRTPAEDSQAVDRCYRIGQTRDVVVYRLIAAGTVEEKMYEKQVHKDGIRRTVFTEDTSVE 684
Query: 816 RYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHH 875
RYF + +LR+L +L G + + Q G + D+ H L G+ G+S H
Sbjct: 685 RYFDKLELRKLFALGAPGVCEVMEKVQ-KATQGVESKWDQ----HEFVLSQSGVVGLSRH 739
Query: 876 SLLFSKTA 883
+S+ A
Sbjct: 740 DGFYSQAA 747
>gi|19075591|ref|NP_588091.1| SNF2 family helicase Rhp26 [Schizosaccharomyces pombe 972h-]
gi|74698399|sp|Q9UR24.1|RHP26_SCHPO RecName: Full=DNA repair protein rhp26; AltName: Full=RAD26 homolog
gi|5902438|dbj|BAA84456.1| Rhp26 [Schizosaccharomyces pombe]
gi|6562902|emb|CAB62827.1| SNF2 family helicase Rhp26 [Schizosaccharomyces pombe]
Length = 973
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 217/567 (38%), Positives = 318/567 (56%), Gaps = 70/567 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLI 352
+ +PG I LF +Q ++WLW L+CQ GGI+GD+MGLGKT+QI FL+ L HS +
Sbjct: 267 FTIPGDIRPHLFRYQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFLSSLHHSGKFQ 326
Query: 353 KRALVVAPKTLLSHWIKE------------LTAVG----LSAKIREYFGTCVKTRQYELQ 396
K AL+V P TL+ W+ E L A G S + R+Y ++ E +
Sbjct: 327 KPALIVCPATLMKQWVNEFHTWWAPLRVVVLHATGSGQRASREKRQYESDASESEAEESK 386
Query: 397 YVLQDKGVLLTTYDIVRNNSKSL--RGSSFISDEAG---DDDAI----WDYMILDEGHLI 447
++ +G + + +N +S+ RG I+ AG D I W Y +LDEGH I
Sbjct: 387 TSIKLRGASSSFHRYAKNLVESVFTRGHILITTYAGLRIYGDLILPREWGYCVLDEGHKI 446
Query: 448 KNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPI 507
+NP ++ + S +I + +RII+SGTPIQNNL ELW LF+F P LG F+ ++ LPI
Sbjct: 447 RNPDSEISISCKQIRTVNRIILSGTPIQNNLTELWNLFDFVFPGRLGTLPVFQNQFALPI 506
Query: 508 LRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVW 567
G +A + + + A LR+ I PY LRR+K +V +A L KK+E +++
Sbjct: 507 NIGGYANASNVQVQTAYKCACMLRDLISPYLLRRMKLDV--------AADLPKKSEQVLF 558
Query: 568 LRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
+LT QR+ Y+ FL + +G L + IL+KIC+HP L+T+
Sbjct: 559 CKLTPLQRKAYQDFLQGSDMQKILNGKRQMLYGIDILRKICNHPDLVTR----------- 607
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQ 685
+ +H K+D+ S K+ I +LL +GH L+FSQ
Sbjct: 608 ------------EYLLH------KEDYNYGDPEKSGKLKVIRALLTLWKKQGHRTLLFSQ 649
Query: 686 TRKMLNLIQESIGSKGY---KFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
TR+ML++++ IG K + R+DG+T + R +V++F + + +FLLT++VGGLG
Sbjct: 650 TRQMLDILE--IGLKDLPDVHYCRMDGSTSIALRQDLVDNFNKNEYFDVFLLTTRVGGLG 707
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQKKDVVVYRLMT GT+EEKIY +QIFK
Sbjct: 708 VNLTGADRVILFDPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQ 767
Query: 803 GLFKTATEHKEQIRYFSQQDLRELLSL 829
L + +Q R+F DL +L +L
Sbjct: 768 FLTNKILKDPKQRRFFKMTDLHDLFTL 794
>gi|354548455|emb|CCE45191.1| hypothetical protein CPAR2_702030 [Candida parapsilosis]
Length = 1011
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 214/586 (36%), Positives = 322/586 (54%), Gaps = 97/586 (16%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
+ LPG I LF +Q+ ++WLW L+ Q GGI+GD+MGLGKT+QI FLAGL +S L+
Sbjct: 303 AFKLPGDIYPSLFDYQKTCVQWLWELYSQKTGGIIGDEMGLGKTIQIISFLAGLHYSGLL 362
Query: 353 KR-ALVVAPKTLLSHWIKE------------LTAVGLS---------AKIREYFGTC--- 387
++ L+V P T+L+ W+ E L ++G AK+ EY
Sbjct: 363 RKPVLIVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGMGENAKVSEAKMEEYMENWDPQ 422
Query: 388 --------VKTR---QYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIW 436
+KT+ Q + V+ VL+TTY +R SK + W
Sbjct: 423 TSKSSLKGIKTQINAQKIVDRVVAKGHVLITTYVGLRIYSKYILPQE------------W 470
Query: 437 DYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDN 496
Y +LDEGH I+NP + + + +I + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 471 GYCVLDEGHKIRNPDSDISLTCKQIKTVNRIILSGTPIQNNLTELWSLFDFIFPGRLGTL 530
Query: 497 KWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSA 556
F++++ +PI G ++ + + + A LR+ I PY LRRLKN+V +
Sbjct: 531 PVFQQQFSIPINVGGYANSNNLQVKTAYKCAVVLRDLISPYLLRRLKNDV--------AK 582
Query: 557 TLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTK 614
L KK+EM+++++LT Q+ LYE FL SE + S G + L + +L+KIC+HP L+ +
Sbjct: 583 DLPKKSEMVLFVKLTRIQQDLYEKFLESEDLNSILKGKRNVLMGVDVLRKICNHPDLVYR 642
Query: 615 RAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLI 674
A MH ++ + S K+ + +LL
Sbjct: 643 DAL-----------------------MHKSNYGDPKK--------SGKMQVLKNLLQLWQ 671
Query: 675 PEGHNVLIFSQTRKMLNLIQESIG--------SKGYKFLRIDGTTKASDRVKIVNDFQEG 726
EGH L+F QTR+ML+++++ + ++ + +LR+DG+T S R +V++F
Sbjct: 672 SEGHKTLLFCQTRQMLDILEKFVSNLPCLNDQAQYFTYLRMDGSTAISQRQSLVDEFNND 731
Query: 727 DVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMT 786
+FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQKKD+ +YRLMT
Sbjct: 732 PNVHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKKDITIYRLMT 791
Query: 787 CGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQ 832
G++EEKIY +QIFK L + +Q R+F DL +L +L Q
Sbjct: 792 TGSIEEKIYHRQIFKTFLQNKILKDPKQRRFFKTNDLHDLFTLGDQ 837
>gi|242795848|ref|XP_002482676.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces stipitatus
ATCC 10500]
gi|218719264|gb|EED18684.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1210
Score = 357 bits (915), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 220/628 (35%), Positives = 334/628 (53%), Gaps = 100/628 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI- 352
Y +PG I +LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAGL HSRL+
Sbjct: 412 YRVPGDIFPVLFDYQKTGVQWLWELYQQQVGGIIGDEMGLGKTIQVISFLAGLHHSRLLN 471
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKI-------------------------------R 381
K +VVAP T++ W+ E ++ R
Sbjct: 472 KPVIVVAPATVMKQWVTEFHRWWPPFRVSILHTSGSGMINVRSESNRENALTNEMWDPSR 531
Query: 382 EYFGT-CVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
Y T KT + +Q V+++ VL+TTY ++ + L WD I
Sbjct: 532 PYTMTKAQKTAKKIVQRVVEEGHVLVTTYSGLQTYAPVLIPVD------------WDCAI 579
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP+T E+ + HR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 580 LDEGHKIRNPNTSITIHCKELRTPHRLILSGTPMQNNLSELWSLFDFVFPMRLGTLVDFR 639
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
++E PI +G +A + + + + A+ L++ I PY L+R K +V ++ L K
Sbjct: 640 NQFEFPIRQGGYANASNLQVQTAARCAETLKDAISPYLLQRFKVDV--------ASDLPK 691
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAE 618
K+E +++ +L+ QR+ YE FLNS+ S F G L + +L+KIC+HP L+T +
Sbjct: 692 KSEQVLFCKLSPLQRKAYEQFLNSQECNSIFAGRRQVLYGVDMLRKICNHPDLVTHKLFS 751
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
D+ + S K+ + +LL+ GH
Sbjct: 752 TTTGYGDA-------------------------------SKSGKMQVVKALLELWKDTGH 780
Query: 679 NVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+F+Q R MLN++++ + + G+ + R+DG T R +V++F +FLLT++
Sbjct: 781 KTLLFAQHRIMLNILEKFVNTLSGFNYRRMDGDTPIHRRQLLVDEFNNSPDIHVFLLTTK 840
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +
Sbjct: 841 VGGLGVNLTGADRVIIYDPDWNPSTDMQARERAWRLGQKREVTIYRLMTAGTIEEKIYHR 900
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG-------FDVSLTQQQLHE----E 846
QIFK L + +Q + F +L +L SL ++G F +T Q+ E +
Sbjct: 901 QIFKQFLTNKVLKDPKQRQTFEMSNLHDLFSLGEEGQTETSNMFKTEVTYQEKGETKEKK 960
Query: 847 HGDQHNMDESLEAHIQFLDTLGIAGVSH 874
G + + S E IQ ++ GIA V H
Sbjct: 961 PGTEQAVSISDEKDIQKVE--GIAAVEH 986
>gi|255726894|ref|XP_002548373.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134297|gb|EER33852.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 1043
Score = 357 bits (915), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 231/656 (35%), Positives = 347/656 (52%), Gaps = 103/656 (15%)
Query: 270 LDDYSDDSVLEDEGSITLSGP-------RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQG 322
L +SDDS +D L P + LPG I LF +Q+ ++WLW L+ Q
Sbjct: 240 LRPHSDDSENKDTPEWFLPHPTIADAKLNENFRLPGDIYPSLFDYQKTCVQWLWELYSQK 299
Query: 323 KGGILGDDMGLGKTMQICGFLAGLFHSRLI-KRALVVAPKTLLSHWIKE----------- 370
GGILGD+MGLGKT+QI FLAGL +S L+ K L+V P T+L+ W+ E
Sbjct: 300 TGGILGDEMGLGKTIQIISFLAGLHYSGLLDKPVLIVVPATVLNQWVNEFHRWWPPLRCV 359
Query: 371 -LTAVGL--------SAKIREYF-------------GTCVKTRQYELQYVLQDKG-VLLT 407
L ++G AK+ E+ G + E+ + +KG VL+T
Sbjct: 360 ILHSIGSGMNGKNINEAKLEEFLENADPNSSKSSLSGVKSQINAKEIIDRVMEKGHVLVT 419
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
TY +R SK L W Y++LDEGH I+NP + + + I + +RI
Sbjct: 420 TYVGLRIYSKYLLPRE------------WGYVVLDEGHKIRNPDSDISLTCKMIKTVNRI 467
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
I+SGTPIQNNL ELW+LF+F P LG F++++ +PI G ++ + + + A
Sbjct: 468 ILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFQQQFSIPINIGGYANSNNLQVKTAYKCA 527
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
LR+ I PY LRRLK++V + L KKNEM+++++LT Q++LYE FL SE +
Sbjct: 528 VVLRDLISPYMLRRLKSDV--------AKDLPKKNEMVLFVKLTKPQQELYEKFLQSEDL 579
Query: 588 LSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
S G + L + IL+KIC+HP L+ + D+M+ + +
Sbjct: 580 DSILKGKRNMLMGIDILRKICNHPDLVYR----------DAMMKKKSYGDPSR------- 622
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGS------ 699
S K+ + +LL E H L+F QTR+ML+++++ + +
Sbjct: 623 --------------SGKMQVLKNLLQIWQSEDHKTLLFCQTRQMLDILEKFVANLPLLNG 668
Query: 700 KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
+ +LR+DG+T S R +V+ F +FLLT++VGGLG+ LT ADRVI+ DP WN
Sbjct: 669 GEFNYLRMDGSTPISRRQMLVDKFNRDPNMHVFLLTTKVGGLGVNLTGADRVIIYDPDWN 728
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFS 819
PSTD Q+ +RA+R+GQKKD+ +YRLMT G++EEKIY +QIFK L + +Q R+F
Sbjct: 729 PSTDIQARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFK 788
Query: 820 QQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHN--MDESLEAHIQFLDTLGIAGVS 873
DL +L +L Q + + T+ +E++ + + + + F IAGVS
Sbjct: 789 ANDLHDLFTLGDQDEEGTETEAMFNEKNNNNGSSLFTKKYKNDDDFYQVAKIAGVS 844
>gi|50548883|ref|XP_501912.1| YALI0C16643p [Yarrowia lipolytica]
gi|49647779|emb|CAG82232.1| YALI0C16643p [Yarrowia lipolytica CLIB122]
Length = 1085
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 228/654 (34%), Positives = 342/654 (52%), Gaps = 99/654 (15%)
Query: 262 AHSGLVNVLDDYSDDSVLED--EGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLH 319
A +G++ DY+ + L D E L G + +PG+I N LF +Q+ ++WLW LH
Sbjct: 254 ARAGVIVPASDYAKEEWLLDGPEADAILEG---NFKVPGEIFNALFDYQKTCVQWLWELH 310
Query: 320 CQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI-KRALVVAPKTLLSHWIKE-------L 371
Q GGI+GD+MGLGKT+QI FLAGL HS L+ K +VV P T++ W++E L
Sbjct: 311 TQKTGGIIGDEMGLGKTIQIISFLAGLHHSGLLTKPVIVVCPATVMKQWVEEFHKWWPAL 370
Query: 372 TAVGLSA----------------------KIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
V L + ++ + K + V +D V++TTY
Sbjct: 371 RVVILHSMGEGSKGKKKRKGEIDSDDDDDEMIRPTPSSTKNLVETIDKVFKDGHVVVTTY 430
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
KS R S + D W Y ILDEGH I+NP +Q ++ + HR+I+
Sbjct: 431 ----AGLKSYR--SLLLDRE------WGYCILDEGHKIRNPDSQITLDCKQLKTVHRLIL 478
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
SGTPIQNNL ELW+L +F CP LG F ++ +PI G +A + + + A
Sbjct: 479 SGTPIQNNLTELWSLLDFVCPGRLGTLPVFHSQFAVPINVGGYANATNIQVQTAYKCAVV 538
Query: 530 LRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLS 589
LR+ I PY LRR+K +V + L KK E +++ +LT QR Y+ FL SE + S
Sbjct: 539 LRDLIAPYLLRRMKTDV--------ATDLPKKEEKVLFCKLTDSQRLHYKGFLKSEELKS 590
Query: 590 AFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
G L + IL+KIC+HP L ++ + D + D A
Sbjct: 591 ILAGKRQSLFGIDILRKICNHPDLASREILKKTAD------------------YYYGDPA 632
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGS-KGYKFLR 706
+ S K+ + +L+D +GH L+F QTR+ML ++++ + K+LR
Sbjct: 633 K-----------SGKMQVVKALVDLWKKQGHRTLLFCQTRQMLEILEDFFANMPDIKYLR 681
Query: 707 IDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
+DGTT S R +V+ + + +FLLT++VGGLG+ LT A+RVI+ DP WNPSTD Q+
Sbjct: 682 MDGTTPISKRQDMVDTYNKDTSYDLFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTDLQA 741
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLREL 826
+R++R+GQK++VVVYRLMT GT+EEKIY +QIFK L + +Q R+F D+ +L
Sbjct: 742 RERSWRLGQKRNVVVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDAKQRRFFKMNDIHDL 801
Query: 827 LSL-------PKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVS 873
SL + G S +++++ + ++ D+ F +G+ GVS
Sbjct: 802 FSLDDGEGDTTETGMIFSGSEKKIENKKPEKKMKDDD-----DFYQVVGLNGVS 850
>gi|298705975|emb|CBJ29096.1| SNF2 family protein [Ectocarpus siliculosus]
Length = 1288
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 212/557 (38%), Positives = 316/557 (56%), Gaps = 54/557 (9%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVA 359
I LF QR G+RW+W LH QG GGI+GD+MGLGKT+Q+ FL L S +++RAL++
Sbjct: 415 IAQRLFQFQRTGVRWMWQLHRQGAGGIVGDEMGLGKTVQVSAFLGALHGSSVMRRALILC 474
Query: 360 PKTLLSHWIKEL-------TAVGLSAKIREY---FGTCVKTRQYELQYVLQDKGVLLTTY 409
P T+LSHW+ EL V L ++ + G K R + + + V++ +Y
Sbjct: 475 PATVLSHWMAELHIWAPQLRVVVLHRCVQAFNAVSGNSGKLRALIRRILGWPEVVVVASY 534
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
+ KSL+ + WDY +LDEG I+NP + +I + HR+I+
Sbjct: 535 E----GMKSLKAFLLPCN--------WDYCVLDEGQRIRNPDAEVTLICKQIRTVHRLIL 582
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
+GTPIQNNL+ELW+LF+F P LG F+ ++ PI G +A + R+ A
Sbjct: 583 TGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQARLAYRCALV 642
Query: 530 LRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLS 589
LR+ IQPY LRR K ++ ED + L K E +++ RLTS QR+LY FL S V S
Sbjct: 643 LRDLIQPYLLRRQKKDL--EDIIH----LPAKTEQVLFCRLTSYQRRLYSEFLESTEVKS 696
Query: 590 AFDGSPLA--ALTILKKICDHPLLLTK-------RAAEDVLDGMDSMLNPEDAALAEKLA 640
+ A A+ IL+K+C+HP L+ + R A + G DS DA+ E+
Sbjct: 697 VLSRTMRAFRAIGILRKLCNHPDLVCRFGDSVVTRLASHQIWGGDS-----DASEKEE-- 749
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIP----EGHNVLIFSQTRKMLNLIQES 696
D AE+ H+ + S L +L +++P +GH VL+FSQTR+ML++I+
Sbjct: 750 ---DDTAEESKSDNDHE---VQRSGKLLVLQQILPLWHKQGHRVLLFSQTRQMLSIIERF 803
Query: 697 IGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDP 756
+ + + + R+DG+T +R +++ F + I LLT++ GG+G+ LT ADRVI+ DP
Sbjct: 804 VVNNEWSYGRLDGSTPVGNRQTLIDRFNNDESMFIMLLTTRTGGVGVNLTGADRVILFDP 863
Query: 757 AWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIR 816
WNPSTD Q+ +R++R+GQ++ V VYRL+T GT+EEKIY +QIFK L + +Q R
Sbjct: 864 DWNPSTDMQARERSWRVGQRRQVTVYRLVTAGTIEEKIYHRQIFKTALTNRVLQDPKQRR 923
Query: 817 YFSQQDLRELLSLPKQG 833
FS +L +L +L G
Sbjct: 924 MFSADELGDLFTLGDDG 940
>gi|290973846|ref|XP_002669658.1| DEAD/DEAH box helicase [Naegleria gruberi]
gi|284083208|gb|EFC36914.1| DEAD/DEAH box helicase [Naegleria gruberi]
Length = 1029
Score = 355 bits (911), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 202/557 (36%), Positives = 308/557 (55%), Gaps = 67/557 (12%)
Query: 284 SITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL 343
SI ++G +Y +P +I + LF +Q+ L+W+ L+ QG GGILGD+MGLGKT+QI FL
Sbjct: 274 SIQIAG---SYSIPKEIYDKLFGYQKTTLKWMCELNRQGVGGILGDEMGLGKTVQITTFL 330
Query: 344 AGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD-- 401
AGL S L + ++++AP T++ W +E+ ++R + + + +++
Sbjct: 331 AGLHFSGLFEPSIIIAPATVMKQWQEEINT--WWPELRVVIMHTSQGTKANFESLIEKVS 388
Query: 402 ---KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL 458
GVL+TTY+ +R L W Y+ILDEGH I+NP +
Sbjct: 389 SCPNGVLITTYESLRIYQDVLTSKK------------WGYIILDEGHKIRNPDAALTLAC 436
Query: 459 LEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDR 518
+ HRII++GTPIQNNLKELW+LF+FC P LG F ++ +PI +G +A
Sbjct: 437 KRFETPHRIILTGTPIQNNLKELWSLFDFCYPGKLGTLPVFLTQFSIPITQGGYSNATKF 496
Query: 519 EKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY 578
+ + + LR+ I+PY LRR+K +V H+ L +K E +++ +LT Q ++Y
Sbjct: 497 QVQTAYKCSCVLRDLIKPYLLRRMKKDVKHQ--------LPEKKENVIFCKLTDKQVKIY 548
Query: 579 EAFLNSEIVLSAFDGSPL--AALTILKKICDHP-LLLTKRAAEDVLDGMDSMLNPEDAAL 635
+ +L S V DG L A+T L+K+C+HP L+ T++ P+D
Sbjct: 549 DEYLKSREVTGTLDGEHLLFKAITNLRKVCNHPDLICTEKK-------------PDDFGA 595
Query: 636 AEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQE 695
EK S K+ + LL + H VL+FSQ++KML++ +
Sbjct: 596 VEK---------------------SGKMMVVEKLLSLWKEQNHRVLLFSQSKKMLDVFEP 634
Query: 696 SIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVD 755
+ + Y + R+DG T +R ++N F D +FLLT++VGGLG+ L A+R+I+ D
Sbjct: 635 FLQERDYTYSRMDGDTPVKERSVLINQFNSDDKIFVFLLTTKVGGLGVNLIGANRIILFD 694
Query: 756 PAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI 815
P WNPSTD Q+++RA+R+GQ K V VYRLMT GT+EEK+Y +QIFK L + Q
Sbjct: 695 PDWNPSTDLQALERAWRLGQTKQVTVYRLMTSGTIEEKMYHRQIFKQFLSNKVLKDPRQK 754
Query: 816 RYFSQQDLRELLSLPKQ 832
R+F DL EL +L K+
Sbjct: 755 RFFKSNDLYELFTLGKE 771
>gi|241959152|ref|XP_002422295.1| ATP-dependent helicase, putative; DNA repair and recombination
protein rad26 homologue, putative [Candida dubliniensis
CD36]
gi|223645640|emb|CAX40300.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
Length = 1054
Score = 355 bits (911), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 212/581 (36%), Positives = 325/581 (55%), Gaps = 93/581 (16%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI- 352
+ LPG I LF +Q+ ++WLW L+ Q GGI+GD+MGLGKT+QI FLAGL +S L+
Sbjct: 264 FKLPGDIYPSLFDYQKTCVQWLWELYTQKTGGIIGDEMGLGKTIQIISFLAGLHYSGLLD 323
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGLS-----AKIREYFGTC------ 387
K L+V P T+L+ W+ E G+S +K+ EY +
Sbjct: 324 KPVLIVVPATVLNQWVNEFHRWWPPLRCIILHSIGSGMSGAVSESKLEEYLESTDPDSTQ 383
Query: 388 -----VKTR---QYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYM 439
+K++ Q + V++ VL+TTY +R SK + W Y+
Sbjct: 384 SSLHGIKSQINAQEIIDRVMEKGHVLVTTYVGLRIYSKHILPRE------------WGYV 431
Query: 440 ILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWF 499
+LDEGH I+NP + + + +I + +RII+SGTPIQNNL ELW+LF+F P LG F
Sbjct: 432 VLDEGHKIRNPDSDISLTCKKIKTVNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVF 491
Query: 500 KEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLS 559
++++ +PI G ++ + + + A LR+ I PY LRRLK++V + L
Sbjct: 492 QQQFSIPINIGGYANSNNLQVKTAYKCAVVLRDLISPYMLRRLKSDVAQD--------LP 543
Query: 560 KKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAA 617
KKNEM+++++LT Q++LYE+FL SE + S G + L + IL+KIC+HP L+ +
Sbjct: 544 KKNEMVLFVKLTKIQQELYESFLQSEDLESILKGKRNVLMGVDILRKICNHPDLVYR--- 600
Query: 618 EDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
D+++ ++ K S K+ + +LL E
Sbjct: 601 -------DTLMKKKNYGDPAK---------------------SGKMQVLKNLLRLWQHEN 632
Query: 678 HNVLIFSQTRKMLNLIQESIGSKG------YKFLRIDGTTKASDRVKIVNDFQEGDVAPI 731
H L+F QTR+ML+++++ + + +K+LR+DG+T S R +V+ F + +
Sbjct: 633 HKTLLFCQTRQMLDILEKFVANLSLINGGDFKYLRMDGSTPISKRQMLVDAFNQDPDMHV 692
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+D+ +YRLMT G++E
Sbjct: 693 FLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKRDITIYRLMTTGSIE 752
Query: 792 EKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQ 832
EKIY +QIFK L + +Q R+F DL +L +L Q
Sbjct: 753 EKIYHRQIFKTFLTNKILKDPKQRRFFKANDLHDLFTLGDQ 793
>gi|152012467|gb|AAI50169.1| Si:ch211-278b8.3 protein [Danio rerio]
Length = 579
Score = 355 bits (910), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 195/488 (39%), Positives = 303/488 (62%), Gaps = 42/488 (8%)
Query: 304 LFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKT 362
L+ HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+Q+ FL+G++ + L AL+V P +
Sbjct: 105 LYDHQKEGVAFLYSLYRDGRKGGILADDMGLGKTIQVISFLSGMYDAELANHALLVMPTS 164
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGS 422
L+ +W++E +++E+ G+ R L+ + + GV++TTY ++ NN + L GS
Sbjct: 165 LIKNWVREFAKWTPGMRVKEFHGSSKTERNRNLERIQRKGGVIITTYQMLINNYEQL-GS 223
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELW 482
+ G + WDY+ILDE H IK ST+ AKS IP+ +R++++GTP+QNNL+E+W
Sbjct: 224 N------GHREFKWDYVILDEAHKIKTSSTKTAKSAHAIPAKNRVLLTGTPVQNNLREMW 277
Query: 483 ALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRR 541
ALF+F C LLG +K FK +YE PI R +K A EK +G +++ L + I+PYFLRR
Sbjct: 278 ALFDFACQGSLLGTSKTFKTEYENPITRAREKDATPGEKALGLRISQNLTDIIKPYFLRR 337
Query: 542 LK---------------------NEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
K N+ + + +L++KN++IVW L+S Q +Y
Sbjct: 338 TKADVQQKKLKLEEGFEEEEDQENKCPNAREGVEMPSLTRKNDLIVWTYLSSVQEDIYNK 397
Query: 581 FLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAED--VLDGMDSMLNPEDAALA 636
F++ + + L SPLA LT+LKK+CDHP LL++RA + G DS L D +
Sbjct: 398 FISLDQIKELLTTTRSPLAELTVLKKLCDHPRLLSQRAVIQLGLERGSDSELVHSDE--S 455
Query: 637 EKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQES 696
E I ++++ +E S K+ F++SL++ L EGH LIFSQ+RKML++++
Sbjct: 456 ESAVSQIDNISDHTLIEE-----SGKLQFVVSLMECLREEGHRTLIFSQSRKMLDIMERV 510
Query: 697 IGSKGYKFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVD 755
+ ++ ++ LR+DGT T+ ++R K ++ FQ IFLLT+QVGG+G+TLT A+RV++ D
Sbjct: 511 LRNRNFRLLRLDGTVTQLAEREKRISLFQTDKRYTIFLLTTQVGGVGITLTGANRVVIFD 570
Query: 756 PAWNPSTD 763
P+WNP+TD
Sbjct: 571 PSWNPATD 578
>gi|154271055|ref|XP_001536381.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus
NAm1]
gi|150409604|gb|EDN05048.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus
NAm1]
Length = 1275
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 217/602 (36%), Positives = 323/602 (53%), Gaps = 92/602 (15%)
Query: 275 DDSVLEDEGSITLSGPR-------STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGIL 327
D +++EDE L P+ + +PG I LF +Q+ G++WLW L+ Q GGI+
Sbjct: 392 DSTLVEDEKEWFLPHPKVPDKVIDGGFRIPGDIYPYLFDYQKTGVQWLWELYQQKVGGII 451
Query: 328 GDDMGLGKTMQICGFLAGLFHSR-LIKRALVVAPKTLLSHWIKEL--------------T 372
GD+MGLGKT+Q+ FLAGL HS+ L K +VV P T++ W+ E +
Sbjct: 452 GDEMGLGKTIQVIAFLAGLHHSKKLTKSVIVVCPPTVMKQWVNEFHRWWAPFRVSILHSS 511
Query: 373 AVGLSAKIREYFGTC-VKTRQYE-----------------LQYVLQDKGVLLTTYDIVRN 414
G+ E F ++++ +E L+ VL++ VL+TTY +
Sbjct: 512 GSGMVNLRSESFADARLESQLWEPDQPRRLPKEQKAAKRILKRVLEEGHVLVTTY----S 567
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
++ R D W ILDEGH I+NP T E+ +AHR+I+SGTP+
Sbjct: 568 GLQTYRSLLIPVD--------WGCAILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPM 619
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
QNNL ELW+LF+F P LG F+ ++E PI G +A + + + + A+ L++ I
Sbjct: 620 QNNLTELWSLFDFAFPMRLGTLVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAI 679
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG- 593
PY L+R K +V +A L KK+E +++ +LT QR YEAFL S + S G
Sbjct: 680 SPYLLQRFKIDV--------AADLPKKSEQVLFCKLTKLQRSAYEAFLGSNEMSSILRGR 731
Query: 594 -SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
L + +L+KIC+HP L PE L++K + + ++
Sbjct: 732 REALYGIDMLRKICNHPDL------------------PEHKVLSKKPSYNYGSASK---- 769
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKG-YKFLRIDGTT 711
S K+ + SLL+ GH L+F+Q R ML++++ I S G +K+ R+DG T
Sbjct: 770 -------SGKMQVVKSLLELWRDTGHKTLLFTQHRIMLDILERFIISMGGFKYQRMDGNT 822
Query: 712 KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
R K+V++F +FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+
Sbjct: 823 PIKFRQKMVDEFNNNPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAW 882
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPK 831
R+GQK++V +YRLMT GT+EEKIY +QIFK L + +Q + F DL +L +L
Sbjct: 883 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQMSDLHDLFTLGN 942
Query: 832 QG 833
G
Sbjct: 943 DG 944
>gi|449666890|ref|XP_002155441.2| PREDICTED: DNA excision repair protein ERCC-6-like, partial [Hydra
magnipapillata]
Length = 1025
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 207/577 (35%), Positives = 316/577 (54%), Gaps = 65/577 (11%)
Query: 271 DDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDD 330
DD +DD+ +ED ++LP K+ N L+ +QR G+RWLW LH Q GGI+GD+
Sbjct: 244 DDVNDDAEIED-----------GFLLPRKLWNKLYKYQRVGVRWLWQLHAQEVGGIVGDE 292
Query: 331 MGLGKTMQICGFLAGLFHSRL----------IKRALVVAPKTLLSHWIKELTAVG--LSA 378
MGLGKT+Q+ FLAGL +S+ + L+V P T++ W+ E
Sbjct: 293 MGLGKTIQVISFLAGLVYSKKGNNINNNKFGLGSVLIVCPATVMFQWVSEFHMWWPHFRV 352
Query: 379 KIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDY 438
I GT + + ++ + + G+L+TTY+ V N+ K L + W Y
Sbjct: 353 AILHSSGTFIGSPLTLIRAISKHPGILITTYNSVLNHKKELYKHN------------WQY 400
Query: 439 MILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKW 498
+ILDEGH I+NP + + ++HR+I++GTP+QN+LKELW+LF+F P LG
Sbjct: 401 VILDEGHKIRNPDALITLACKQFNTSHRLILTGTPMQNSLKELWSLFDFVYPGRLGTLPV 460
Query: 499 FKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATL 558
F ++ +PI G +A + + L++ I PY +RR+K DV + L
Sbjct: 461 FMAEFSIPITMGGYANASSLQVQAAYKCCCILKDTITPYMIRRMKK------DVQQTLFL 514
Query: 559 SKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRA 616
K+E I++ +LT Q+ +Y+ F++S V S +G L L+KIC+HP L++
Sbjct: 515 PTKSEQILFCKLTEEQKAIYKEFISSRDVASILNGDMKIFPGLIKLRKICNHPDLVS--L 572
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A +V G + L D A F ++ S K+ + +LL +
Sbjct: 573 AAEVEKGKPASL----------------DDASCYGFWKR----SGKMIVVENLLRMWKHQ 612
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
GH VL+F+Q+++ML++++ + + + ++R+DGTT R IV F E +FLLT+
Sbjct: 613 GHRVLLFTQSKQMLDILEGFLKAAEHSYMRMDGTTSVKSRHGIVKKFHESKNIFVFLLTT 672
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+VGGLGL L A+RVI+ DP WNPS D+Q+ +R++RIGQ KDV +YRL+T GT+EEKIY
Sbjct: 673 RVGGLGLNLIAANRVIIYDPDWNPSVDSQARERSWRIGQLKDVTIYRLLTTGTIEEKIYH 732
Query: 797 KQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
+QIFK L + Q R+F DL EL +L G
Sbjct: 733 RQIFKQFLTNRVLTNPYQRRFFKNNDLHELFTLGDVG 769
>gi|150864673|ref|XP_001383607.2| DNA dependent ATPase [Scheffersomyces stipitis CBS 6054]
gi|149385929|gb|ABN65578.2| DNA dependent ATPase [Scheffersomyces stipitis CBS 6054]
Length = 1067
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 218/609 (35%), Positives = 333/609 (54%), Gaps = 103/609 (16%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI- 352
+ LPG I LF +Q+ ++WLW L+ Q GGI+GD+MGLGKT+Q+ F+AGL +S L+
Sbjct: 269 FKLPGDIYPSLFDYQKTCVQWLWELYSQKTGGIIGDEMGLGKTIQVISFVAGLHYSGLLD 328
Query: 353 KRALVVAPKTLLSHWIKEL----------------TAVGLSA-----KIREYF------- 384
K LVV P T+L+ W+ E + +G SA K+ E+
Sbjct: 329 KPVLVVVPATVLNQWVNEFHRWWPPLRCIILHSIGSGMGKSAVRSEEKLEEFLENSDPTQ 388
Query: 385 ------GTCVKTRQYELQYVLQDKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWD 437
G + E+ + +KG VL+TTY +R SK + W
Sbjct: 389 SKNSLRGINSQINAKEIVDRVMEKGHVLVTTYVGLRIYSKHILPRE------------WG 436
Query: 438 YMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNK 497
Y++LDEGH I+NP + + + +I + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 437 YVVLDEGHKIRNPDSDISLTCKQIKTYNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLP 496
Query: 498 WFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT 557
F++++ +PI G +A + + + G A LR+ I PY LRRLK++V +
Sbjct: 497 VFQQQFSIPINMGGYANASNIQVQTGYKCAVILRDLISPYLLRRLKSDVAQD-------- 548
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKR 615
L KKNEM+++++LT Q++LYE FL+SE + S G + L + IL+KIC+HP L+ +
Sbjct: 549 LPKKNEMVLFVKLTQVQQELYEKFLHSEELSSILKGRRNVLMGVDILRKICNHPDLVNR- 607
Query: 616 AAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIP 675
D+L+ K ++ + S K+ + +LL
Sbjct: 608 ---DILE-------------------------HKKNYNYGNPVKSGKMQVLKNLLQLWQS 639
Query: 676 EGHNVLIFSQTRKMLNLIQESIGS--------KGYKFLRIDGTTKASDRVKIVNDFQEGD 727
+ H L+F QTR+ML+++++ + + + + +LR+DG+T + R +V+ F
Sbjct: 640 QEHKTLLFCQTRQMLDILEKFVANLRLLDIDHEYFTYLRMDGSTPIAKRQDLVDKFNSDP 699
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
+FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQKKD+ +YRLMT
Sbjct: 700 NLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKKDITIYRLMTT 759
Query: 788 GTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEH 847
G++EEKIY +QIFK L + +Q R+F DL +L +L Q ++ E
Sbjct: 760 GSIEEKIYHRQIFKTFLTNKILKDPKQRRFFKVNDLHDLFTLGDQN--------EVGTET 811
Query: 848 GDQHNMDES 856
GD N E+
Sbjct: 812 GDMFNGSET 820
>gi|198420785|ref|XP_002121862.1| PREDICTED: similar to DNA excision repair protein ERCC-6
(ATP-dependent helicase ERCC6) (Cockayne syndrome
protein CSB) [Ciona intestinalis]
Length = 1155
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/562 (36%), Positives = 308/562 (54%), Gaps = 54/562 (9%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
+PGKI N L+ +Q+ G++WLW LH Q GG+LGD+MGLGKT+QI FLAGL +S++ R
Sbjct: 1 MPGKIWNKLYKYQQTGVKWLWELHTQHVGGVLGDEMGLGKTVQIISFLAGLHNSKIRDRD 60
Query: 355 ----------ALVVAPKTLLSHWIKEL-TAVGL-SAKIREYFGTCVKTRQYELQYVLQDK 402
L++AP T++ W++E T + L I G+ ++ + ++ +
Sbjct: 61 ASYSYDGLGPVLIIAPATVMQQWLREFHTWLPLVRVAILHSSGSHRGSKNDLINNMVLSR 120
Query: 403 GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP 462
GVL+T+Y+ R + L W Y+ILDEGH I+NP ++ P
Sbjct: 121 GVLITSYERARLSIDMLMTKG------------WHYVILDEGHKIRNPQAAVTHAVKRFP 168
Query: 463 SAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRI 522
+ HRII+SG+PIQN+L+ELW+LF+F P LG F E++ +PI++G +A + +
Sbjct: 169 TPHRIILSGSPIQNHLQELWSLFDFIYPGKLGTLPVFMEQFSVPIVQGGYANASEVQVET 228
Query: 523 GSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL 582
A LR+ I PY LRR+K DV S L K++ +++ LT Q +Y+ +L
Sbjct: 229 AYKCACVLRDTISPYLLRRMKV------DVQSHIKLPPKSDQVLFCSLTDEQVDVYKEYL 282
Query: 583 NSEIVLSAF--DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
+S+IV S L L+KIC+HP L T KL
Sbjct: 283 DSDIVHSILCRRAKIFVGLIQLRKICNHPDLFTG---------------------GHKLM 321
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK 700
+ A D + + S K+ + SLL +G VL+F+Q+RKML ++++ + S+
Sbjct: 322 VGEATPGYGDSRRFGYWRRSGKMVVVESLLRIWKKQGKKVLLFTQSRKMLGILEDFVKSR 381
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
Y +L + G T R +V F E +F+LT++VGGLG+ L ADRV++ DP WNP
Sbjct: 382 SYCYLTMHGQTSVQARQPLVKKFNEDPSIFVFILTTRVGGLGVNLIGADRVVIYDPDWNP 441
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQ 820
STD Q+ +R++RIGQ K V +YRL+T GT+EEKIY +QIFK + + +Q R+F
Sbjct: 442 STDTQAQERSWRIGQTKQVTIYRLVTSGTIEEKIYHRQIFKQFMTNRVLKDPKQRRFFKS 501
Query: 821 QDLRELLSLPKQGFDVSLTQQQ 842
D+ EL +L Q D S T+ +
Sbjct: 502 NDVHELFTLKHQEKDKSKTETE 523
>gi|68483751|ref|XP_714234.1| hypothetical protein CaO19.607 [Candida albicans SC5314]
gi|46435782|gb|EAK95157.1| hypothetical protein CaO19.607 [Candida albicans SC5314]
gi|238880196|gb|EEQ43834.1| hypothetical protein CAWG_02085 [Candida albicans WO-1]
Length = 1055
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 214/581 (36%), Positives = 325/581 (55%), Gaps = 93/581 (16%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI- 352
+ LPG I LF +Q+ ++WLW L+ Q GGI+GD+MGLGKT+QI FLAGL +S L+
Sbjct: 261 FKLPGDIYPSLFDYQKTCVQWLWELYTQKTGGIIGDEMGLGKTIQIISFLAGLHYSGLLD 320
Query: 353 KRALVVAPKTLLSHWIKE------------LTAVGLS-------AKIREYFGTC------ 387
K LVV P T+L+ W+ E L ++G +K+ EY +
Sbjct: 321 KPVLVVVPATVLNQWVNEFHRWWPPLRCIILHSIGSGMNGSVSESKLEEYLESTDPDATQ 380
Query: 388 -----VKTR---QYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYM 439
+K++ Q + V++ VL+TTY +R SK + W Y+
Sbjct: 381 SSLHGIKSQINAQEIVDRVMEKGHVLVTTYVGLRIYSKHILPRE------------WGYV 428
Query: 440 ILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWF 499
+LDEGH I+NP + + + +I + +RII+SGTPIQNNL ELW+LF+F P LG F
Sbjct: 429 VLDEGHKIRNPDSDISLTCKKIKTVNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVF 488
Query: 500 KEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLS 559
++++ +PI G ++ + + + A LR+ I PY LRRLK++V + L
Sbjct: 489 QQEFSIPINIGGYANSNNLQVKTAYKCAVVLRDLISPYMLRRLKSDVAQD--------LP 540
Query: 560 KKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAA 617
KKNEM+++++LT Q++LYE+FL SE + S G + L + IL+KIC+HP L+ +
Sbjct: 541 KKNEMVLFVKLTKIQQELYESFLQSEDLESILKGKRNVLMGVDILRKICNHPDLVYR--- 597
Query: 618 EDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
D + K + D A+ S K+ + +LL E
Sbjct: 598 --------------DTLMKRK---NYGDPAK-----------SGKMQVLKNLLRLWQSEN 629
Query: 678 HNVLIFSQTRKMLNLIQESIGSKG------YKFLRIDGTTKASDRVKIVNDFQEGDVAPI 731
H L+F QTR+ML+++++ + + + +LR+DG+T S R +V+ F + +
Sbjct: 630 HKTLLFCQTRQMLDILEKFVANLSLINGGDFNYLRMDGSTPISKRQMLVDAFNQDPDMHV 689
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+D+ +YRLMT G++E
Sbjct: 690 FLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKRDITIYRLMTTGSIE 749
Query: 792 EKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQ 832
EKIY +QIFK L + +Q R+F DL +L +L Q
Sbjct: 750 EKIYHRQIFKTFLTNKILKDPKQRRFFKANDLHDLFTLGDQ 790
>gi|294657478|ref|XP_459783.2| DEHA2E10934p [Debaryomyces hansenii CBS767]
gi|199432721|emb|CAG88022.2| DEHA2E10934p [Debaryomyces hansenii CBS767]
Length = 1157
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 218/592 (36%), Positives = 322/592 (54%), Gaps = 100/592 (16%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + LPG I LF +Q+ ++WLW L+ Q GGI+GD+MGLGKT+QI FLAGL +S L
Sbjct: 348 SKFKLPGDIYPSLFDYQKTCVQWLWELYSQKTGGIIGDEMGLGKTIQIISFLAGLHYSGL 407
Query: 352 I-KRALVVAPKTLLSHWIKEL---------------------TAVGLSAKIREYFGTC-- 387
+ K LVV P T+++ W+ E A+ KI + T
Sbjct: 408 LEKPVLVVVPATVMNQWVNEFHRWWPPLRCVILHSIGSGMGKNAIHSEEKIEAFLETTDP 467
Query: 388 --VKT----------RQYELQYVLQDKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDDDA 434
VK R E+ + +KG VL+TTY +R SK FI
Sbjct: 468 SSVKNDSFKGINSHMRAKEIIDTVMEKGHVLVTTYVGLRIYSK------FILPRQ----- 516
Query: 435 IWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLG 494
W Y++LDEGH I+NP + + + +I + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 517 -WGYVVLDEGHKIRNPDSDISLTCKQIKTYNRIILSGTPIQNNLIELWSLFDFIFPGRLG 575
Query: 495 DNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTS 554
F++++ +PI G +A + + + G A LR+ I PY LRRLK++V +
Sbjct: 576 TLPVFEQQFSVPINMGGYANASNVQVQTGYKCAVILRDLISPYLLRRLKSDVAQD----- 630
Query: 555 SATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL 612
L KKNEM+++++LT Q+ LYE FL+SE + + G + L + IL+KIC+HP L+
Sbjct: 631 ---LPKKNEMVLFVKLTQYQQDLYEKFLSSEDLHAILKGKRNILMGVDILRKICNHPDLV 687
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
+ + + ++ + S K+ + +LL
Sbjct: 688 DREI-----------------------------LQRRKNYNYGNPAKSGKLQVLKNLLQL 718
Query: 673 LIPEGHNVLIFSQTRKMLNLIQE------SIGSKG------YKFLRIDGTTKASDRVKIV 720
+GH L+F QT++ML+++++ S+ G + +LR+DG+T R +V
Sbjct: 719 WQMQGHRTLLFCQTKQMLDILEKFVTNLPSLNENGEEVRGTFNYLRMDGSTNIGRRQALV 778
Query: 721 NDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVV 780
+ F E +FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQKKD+
Sbjct: 779 DTFNEDKQYHVFLLTTKVGGLGINLTGADRVIIYDPDWNPSTDIQARERAWRLGQKKDIT 838
Query: 781 VYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQ 832
+YRLMT G++EEKIY +QIFK L + +Q R+F DL +L SL Q
Sbjct: 839 IYRLMTAGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFKVNDLHDLFSLGDQ 890
>gi|68483838|ref|XP_714194.1| hypothetical protein CaO19.8240 [Candida albicans SC5314]
gi|46435735|gb|EAK95111.1| hypothetical protein CaO19.8240 [Candida albicans SC5314]
Length = 1055
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 212/581 (36%), Positives = 325/581 (55%), Gaps = 93/581 (16%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI- 352
+ LPG I LF +Q+ ++WLW L+ Q GGI+GD+MGLGKT+QI FLAGL +S L+
Sbjct: 261 FKLPGDIYPSLFDYQKTCVQWLWELYTQKTGGIIGDEMGLGKTIQIISFLAGLHYSGLLD 320
Query: 353 KRALVVAPKTLLSHWIKE------------LTAVGLS-------AKIREYFGTC------ 387
K LVV P T+L+ W+ E L ++G +K+ EY +
Sbjct: 321 KPVLVVVPATVLNQWVNEFHRWWPPLRCIILHSIGSGMNGSVSESKLEEYLESTDPDATQ 380
Query: 388 -----VKTR---QYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYM 439
+K++ Q + V++ VL+TTY +R SK + W Y+
Sbjct: 381 SSLHGIKSQINAQEIVDRVMEKGHVLVTTYVGLRIYSKHILPRE------------WGYV 428
Query: 440 ILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWF 499
+LDEGH I+NP + + + +I + +RII+SGTPIQNNL ELW+LF+F P LG F
Sbjct: 429 VLDEGHKIRNPDSDISLTCKKIKTVNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVF 488
Query: 500 KEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLS 559
++++ +PI G ++ + + + A LR+ I PY LRRLK++V + L
Sbjct: 489 QQEFSIPINIGGYANSNNLQVKTAYKCAVVLRDLISPYMLRRLKSDVAQD--------LP 540
Query: 560 KKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAA 617
KKNEM+++++LT Q++LYE+FL SE + S G + L + IL+KIC+HP L+ +
Sbjct: 541 KKNEMVLFVKLTKIQQELYESFLQSEDLESILKGKRNVLMGVDILRKICNHPDLVYR--- 597
Query: 618 EDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
D+++ ++ K S K+ + +LL E
Sbjct: 598 -------DTLMKRKNYGDPAK---------------------SGKMQVLKNLLRLWQSEN 629
Query: 678 HNVLIFSQTRKMLNLIQESIGSKG------YKFLRIDGTTKASDRVKIVNDFQEGDVAPI 731
H L+F QTR+ML+++++ + + + +LR+DG+T S R +V+ F + +
Sbjct: 630 HKTLLFCQTRQMLDILEKFVANLSLINGGDFNYLRMDGSTPISKRQMLVDAFNQDPDMHV 689
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+D+ +YRLMT G++E
Sbjct: 690 FLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKRDITIYRLMTTGSIE 749
Query: 792 EKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQ 832
EKIY +QIFK L + +Q R+F DL +L +L Q
Sbjct: 750 EKIYHRQIFKTFLTNKILKDPKQRRFFKANDLHDLFTLGDQ 790
>gi|225555676|gb|EEH03967.1| DNA dependent ATPase [Ajellomyces capsulatus G186AR]
Length = 1276
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 219/602 (36%), Positives = 323/602 (53%), Gaps = 93/602 (15%)
Query: 276 DSVL-EDEGSITLSGPR-------STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGIL 327
DS+L +DE L P+ Y +PG I LF +Q+ G++WLW L+ Q GGI+
Sbjct: 392 DSILADDEKEWFLPHPKVPDKVLDGGYRIPGDIYPYLFDYQKTGVQWLWELYQQKVGGII 451
Query: 328 GDDMGLGKTMQICGFLAGLFHSR-LIKRALVVAPKTLLSHWIKEL--------------T 372
GD+MGLGKT+Q+ FLAGL HS+ L K +VV P T++ W+ E +
Sbjct: 452 GDEMGLGKTIQVIAFLAGLHHSKKLTKSVIVVCPPTVMKQWVNEFHRWWAPFRVSILHSS 511
Query: 373 AVGLSAKIREYFGTC-VKTRQYE-----------------LQYVLQDKGVLLTTYDIVRN 414
G+ E F ++++ +E L+ VL++ VL+TTY +
Sbjct: 512 GSGMVNLRSESFADARLESQLWEPDQPRRLPKEQKAAKRILKRVLEEGHVLVTTY----S 567
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
++ R D W ILDEGH I+NP T E+ +AHR+I+SGTP+
Sbjct: 568 GLQTYRSLLIPVD--------WGCAILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPM 619
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
QNNL ELW+LF+F P LG F+ ++E PI G +A + + + + A+ L++ I
Sbjct: 620 QNNLTELWSLFDFAFPMRLGTLVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAI 679
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG- 593
PY L+R K +V +A L KK+E +++ +LT QR YEAFL S + S G
Sbjct: 680 SPYLLQRFKIDV--------AADLPKKSEQVLFCKLTKLQRSAYEAFLGSNEMSSILRGR 731
Query: 594 -SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
L + +L+KIC+HP L PE L++K + + ++
Sbjct: 732 REALYGIDMLRKICNHPDL------------------PEHKVLSKKPSYNYGSASK---- 769
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKG-YKFLRIDGTT 711
S K+ + SLL+ GH L+F+Q R ML++++ I S G +K+ R+DG T
Sbjct: 770 -------SGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILERFIISMGGFKYQRMDGNT 822
Query: 712 KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
R K+V++F +FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+
Sbjct: 823 PIKFRQKMVDEFNNNPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAW 882
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPK 831
R+GQK++V +YRLMT GT+EEKIY +QIFK L + +Q + F DL +L +L
Sbjct: 883 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQMSDLHDLFTLGN 942
Query: 832 QG 833
G
Sbjct: 943 DG 944
>gi|443708226|gb|ELU03433.1| hypothetical protein CAPTEDRAFT_20149 [Capitella teleta]
Length = 777
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 202/527 (38%), Positives = 298/527 (56%), Gaps = 52/527 (9%)
Query: 315 LWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL--------IKRALVVAPKTLLSH 366
+W LHCQ GGILGD+MGLGKT+Q+ FLAGL +S+L + +LV+ P T+L
Sbjct: 1 MWELHCQKAGGILGDEMGLGKTIQVIAFLAGLENSQLALGRESRGLGPSLVICPTTVLHQ 60
Query: 367 WIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSF 424
W+KE ++ + G+ + ++ ++ KG+L+T Y V + L S
Sbjct: 61 WVKEFHKWWPQRRVAVLHHSGSYSGSEVNLIRSIIGAKGILVTAYSSVLLHQDLLLPQS- 119
Query: 425 ISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWAL 484
W Y ILDEGH I+NP+ Q + ++ + HR+I+SG+P+QNNLKELW+L
Sbjct: 120 -----------WHYAILDEGHKIRNPNAQITVACKQLKTCHRVILSGSPVQNNLKELWSL 168
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
F+F P LG F + + +PI++G +A + A LR+ I PY LRR+K
Sbjct: 169 FDFIFPGKLGTLPDFMQHFSVPIVQGGYSNATQVAVQTAYKCACVLRDTINPYLLRRMKA 228
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLA--ALTIL 602
DV S +L KNE +++ RLT QR++Y+ +L+S+ S G + L L
Sbjct: 229 ------DVKESLSLPAKNEQVLFCRLTEHQREVYKEYLDSKECNSILSGGFMVFPGLVTL 282
Query: 603 KKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCK 662
+K+C+HP D+ G S+ + +D + A+K F ++ S K
Sbjct: 283 RKVCNHP---------DLSTGGPSLFHVDDEE---------EEAAKKFGFWKR----SGK 320
Query: 663 ISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVND 722
+ + LL + H VL+FSQ+R+ML ++Q + +GY + R+DG T S R ++N
Sbjct: 321 MQVLDPLLRLWKKQNHRVLLFSQSRQMLEILQSYVEERGYVYRRMDGGTPISARQPLINS 380
Query: 723 FQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVY 782
F E IFLLT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQ KDV VY
Sbjct: 381 FNEDPSVFIFLLTTRVGGLGINLTGANRVVIYDPDWNPSTDLQARERAWRIGQLKDVTVY 440
Query: 783 RLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
RL+T GT+EEKIY +QIFK L + +Q R+F DL EL +L
Sbjct: 441 RLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKANDLYELFTL 487
>gi|428181427|gb|EKX50291.1| hypothetical protein GUITHDRAFT_46943, partial [Guillardia theta
CCMP2712]
Length = 482
Score = 352 bits (902), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 276/492 (56%), Gaps = 45/492 (9%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTL 363
L P+QREG+ WLW LH +G GGILGD+MGLGKT Q FL G F + + L+V P ++
Sbjct: 15 LLPYQREGVAWLWELHQRGAGGILGDEMGLGKTCQTITFLGGCFEGQQVSHVLIVCPVSV 74
Query: 364 LSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSS 423
LS W E + G + R L+ V + GVLLT+Y + + ++ L +
Sbjct: 75 LSVWEGEFRKFCKDVSPLLFHGANTRERDDNLKSVYKRGGVLLTSYGLASSQAEKLARVN 134
Query: 424 FISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWA 483
WDY++ DEGH +KNPS Q +K L IP+ HR++++GTP+QNNL ELWA
Sbjct: 135 ------------WDYVVCDEGHKLKNPSIQTSKKLRTIPADHRLLLTGTPVQNNLDELWA 182
Query: 484 LFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLK 543
L +F P LL + FK Y PI G+DK A EK++G A+ELR+ PY L R K
Sbjct: 183 LLDFAVPGLLPPQQEFKAHYSRPIADGHDKSAAASEKQLGERRARELRDIFMPYQLARTK 242
Query: 544 NEVFHEDD----------------VTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
+VF++D + +SKK E IVWL TS Q+ +Y FL+S++V
Sbjct: 243 ADVFNKDKKVGGEEERPEEQGGARIQVGLEVSKK-EWIVWLEPTSFQKHVYRQFLDSDVV 301
Query: 588 LSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+A SPLAALT+LKKICDHP LL K L+ AL E A+
Sbjct: 302 HAALSSSRSPLAALTVLKKICDHPYLLQKATEVSSLE-----------ALREADEEQEAE 350
Query: 646 VAEKDDFQE--QHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYK 703
E+D F E S K+ F+L LL +L GH L+FSQ+ +ML L++ +
Sbjct: 351 TLEEDTFSELIGAAVASSKMLFVLHLLQELERGGHKTLVFSQSSRMLRLLRSCTDTLKIS 410
Query: 704 FLRIDG-TTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
L +DG K +DR +IV F + + LT+ VGG+GLTLT ADRVI+ DP+WNP+T
Sbjct: 411 SLFLDGQVNKLADRERIVKKFNSKESVKVLFLTTGVGGVGLTLTGADRVIIYDPSWNPAT 470
Query: 763 DNQSVDRAYRIG 774
D Q+VDRAYR+G
Sbjct: 471 DAQAVDRAYRVG 482
>gi|239615027|gb|EEQ92014.1| DNA repair and recombination protein RAD26 [Ajellomyces
dermatitidis ER-3]
gi|327349863|gb|EGE78720.1| DNA repair and recombination protein RAD26 [Ajellomyces
dermatitidis ATCC 18188]
Length = 1260
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 214/597 (35%), Positives = 318/597 (53%), Gaps = 92/597 (15%)
Query: 280 EDEGSITLSGPR-------STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMG 332
EDE L P+ Y +PG I LF +Q+ G++WLW L+ Q GGI+GD+MG
Sbjct: 397 EDEEEWVLPHPKVPDKILDGGYCVPGDIYPYLFDYQKTGVQWLWELYQQKVGGIIGDEMG 456
Query: 333 LGKTMQICGFLAGLFHSR-LIKRALVVAPKTLLSHWIKEL--------------TAVGLS 377
LGKT+Q+ FLAGL HSR L K +VV P T++ W+ E + G+
Sbjct: 457 LGKTIQVIAFLAGLHHSRILTKPVIVVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMV 516
Query: 378 AKIREYFGTC-VKTRQYE-----------------LQYVLQDKGVLLTTYDIVRNNSKSL 419
RE + ++++ +E L+ VL++ VL+TTY ++ L
Sbjct: 517 NLRRESYADARLESQLWEPDQPRGLTKEQKAAKRILKRVLEEGHVLVTTYSGLQTYCSLL 576
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
W ILDEGH I+NP T E+ +AHR+I+SGTP+QN+L
Sbjct: 577 ------------IPVDWGCAILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNSLT 624
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
ELW+LF+F P LG F+ ++E PI +G +A + + + + A+ L++ I PY L
Sbjct: 625 ELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLL 684
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLA 597
+R K +V +A L KK+E +++ +LT QR YEAFL S + S G L
Sbjct: 685 QRFKIDV--------AADLPKKSEQVLFCKLTKIQRSAYEAFLGSNEMSSILRGRREALY 736
Query: 598 ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHD 657
+ +L+KIC+HP L PE L++K + + ++
Sbjct: 737 GIDMLRKICNHPDL------------------PEHKTLSKKSSYNYGSASK--------- 769
Query: 658 NISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDR 716
S K+ + SLL+ GH L+F+Q R ML++++ I S G+K+ R+DG T R
Sbjct: 770 --SGKMQIVKSLLELWRDTGHKTLLFAQHRIMLDILERFIKSLSGFKYQRMDGNTPIKLR 827
Query: 717 VKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQK 776
+V++F +FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +R++R+GQK
Sbjct: 828 QSMVDEFNNNPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERSWRLGQK 887
Query: 777 KDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
++V +YRLMT GT+EEKIY +QIFK L + +Q + F DL +L +L G
Sbjct: 888 REVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQMSDLHDLFTLGNDG 944
>gi|261188034|ref|XP_002620434.1| DNA repair and recombination protein RAD26 [Ajellomyces
dermatitidis SLH14081]
gi|239593445|gb|EEQ76026.1| DNA repair and recombination protein RAD26 [Ajellomyces
dermatitidis SLH14081]
Length = 1260
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 215/597 (36%), Positives = 318/597 (53%), Gaps = 92/597 (15%)
Query: 280 EDEGSITLSGPR-------STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMG 332
EDE L P+ Y +PG I LF +Q+ G++WLW L+ Q GGI+GD+MG
Sbjct: 397 EDEEEWVLPHPKVPDKILDGGYCVPGDIYPYLFDYQKTGVQWLWELYQQKVGGIIGDEMG 456
Query: 333 LGKTMQICGFLAGLFHSR-LIKRALVVAPKTLLSHWIKEL--------------TAVGLS 377
LGKT+Q+ FLAGL HSR L K +VV P T++ W+ E + G+
Sbjct: 457 LGKTIQVIAFLAGLHHSRILTKPVIVVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMV 516
Query: 378 AKIRE-YFGTCVKTRQYE-----------------LQYVLQDKGVLLTTYDIVRNNSKSL 419
RE Y ++++ +E L+ VL++ VL+TTY ++ L
Sbjct: 517 NLRRESYADPRLESQLWEPDQPRGLTKEQKAAKRILKRVLEEGHVLVTTYSGLQTYCSLL 576
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
W ILDEGH I+NP T E+ +AHR+I+SGTP+QN+L
Sbjct: 577 ------------IPVDWGCAILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNSLT 624
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
ELW+LF+F P LG F+ ++E PI +G +A + + + + A+ L++ I PY L
Sbjct: 625 ELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLL 684
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLA 597
+R K +V +A L KK+E +++ +LT QR YEAFL S + S G L
Sbjct: 685 QRFKIDV--------AADLPKKSEQVLFCKLTKIQRSAYEAFLGSNEMSSILRGRREALY 736
Query: 598 ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHD 657
+ +L+KIC+HP L PE L++K + + ++
Sbjct: 737 GIDMLRKICNHPDL------------------PEHKTLSKKSSYNYGSASK--------- 769
Query: 658 NISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDR 716
S K+ + SLL+ GH L+F+Q R ML++++ I S G+K+ R+DG T R
Sbjct: 770 --SGKMQIVKSLLELWRDTGHKTLLFAQHRIMLDILERFIKSLSGFKYQRMDGNTPIKLR 827
Query: 717 VKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQK 776
+V++F +FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +R++R+GQK
Sbjct: 828 QSMVDEFNNNPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERSWRLGQK 887
Query: 777 KDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
++V +YRLMT GT+EEKIY +QIFK L + +Q + F DL +L +L G
Sbjct: 888 REVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQMSDLHDLFTLGNDG 944
>gi|345492169|ref|XP_001602814.2| PREDICTED: DNA excision repair protein ERCC-6-like [Nasonia
vitripennis]
Length = 1154
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 250/755 (33%), Positives = 373/755 (49%), Gaps = 119/755 (15%)
Query: 97 AESSFSLTSDLSDSSSGVTKDNVGGVVESVADEYEESKGDDVADEEQETENVGIGLKRNE 156
++ S ++TS S+ + D + ++ V +E+E + ++ D E TE
Sbjct: 168 SKKSETITSKTQQCSTPMDLD-LPSALDCVVEEHENNLDSNIHDLESSTETSNT------ 220
Query: 157 PRWVDNNLVSARESFESNLDGEEDGGSLSEVEGDEHLSRVHETKKHHQRQKKNEPKRVHD 216
+ + R+SF NLD EE V DE+ S KK +R+K K++ D
Sbjct: 221 --LIHEQVSKVRKSF--NLDEEESETGSEYVPSDEYDSEEETAKKSERRKKSITSKQILD 276
Query: 217 GERFNGQSFVSGGREEYDDEDDCVIVSGKLVVNRPDRRDGKLNKSAHSGLVNVLDDYSDD 276
DED + R ++ D K N+ H +D+
Sbjct: 277 D----------------GDED--------IYRQRVEQSDYKKNEPLHK-----VDNL--- 304
Query: 277 SVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKT 336
+ +P ++ L+ +Q+ ++W+W LH + GG+LGD+MGLGKT
Sbjct: 305 -----------------FKVPLRVWKHLYKYQKVAVKWMWELHSRNLGGLLGDEMGLGKT 347
Query: 337 MQICGFLAGLFHSRLIK---------RALVVAPKTLLSHWIKELT--AVGLSAKIREYFG 385
+Q+ FLAGL S L+ +L+V P TLL W+K L A I G
Sbjct: 348 VQVIAFLAGLDCSDLLSDGGRFRGLGPSLIVCPATLLEQWVKHFHDWWPTLRAVILHQSG 407
Query: 386 TCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGH 445
T + EL + L+D G+L+T+Y V + + L W Y+ILDEGH
Sbjct: 408 T-FQGDIDELLHTLKDGGILVTSYTGVLIHKEPLLKFK------------WHYVILDEGH 454
Query: 446 LIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYEL 505
I+NP + +K + + HRI+++G+P+QN+LKELW+LF+F P LG F E
Sbjct: 455 KIRNPDAKVSKVVKAFLTPHRILLTGSPMQNSLKELWSLFDFILPGKLGTLPAFMEHCAG 514
Query: 506 PILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMI 565
PI RG +A ++ VA L++ I PY LRR K +V H +L KNE +
Sbjct: 515 PITRGGYANASQLQEATALQVATMLKDAITPYMLRRTKFDVQHH------VSLPDKNEQV 568
Query: 566 VWLRLTSCQRQLYEAFLNSEIVL---------SAFDGSPLAALTILKKICDHP--LLLTK 614
++ LT QRQLY +L S+ V + L ALT L+KIC+HP L T
Sbjct: 569 LFCSLTEEQRQLYIQYLRSDDVSFVIHERREGGRYRARLLVALTALRKICNHPDLFLYTD 628
Query: 615 RAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLI 674
E+ + EDAAL D E + F H + K++ + SLL
Sbjct: 629 NNQEE---------SDEDAALE-------VDENEMEKFG--HWKRAGKMTVVRSLLKIWK 670
Query: 675 PEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLL 734
+GH VL+F+Q+R+M+++++ + + Y +LR+DGTT R V F + +FLL
Sbjct: 671 KQGHRVLLFTQSRQMMHILEGLLQKEKYNYLRMDGTTPMGQRQLTVTKFNQDPSYFVFLL 730
Query: 735 TSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI 794
T++VGGLG+ LT A+RVI+ DP WNP+TD Q+ +RA+RIGQ+K V VYRL+T GT+EEK+
Sbjct: 731 TTRVGGLGVNLTGANRVIIYDPDWNPATDAQARERAWRIGQEKSVTVYRLITAGTIEEKM 790
Query: 795 YRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
Y +Q+FK L E Q R F DL EL +L
Sbjct: 791 YHRQVFKILLSNKVLEDPRQRRLFRTTDLTELFNL 825
>gi|383861226|ref|XP_003706087.1| PREDICTED: DNA excision repair protein ERCC-6-like [Megachile
rotundata]
Length = 1127
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 204/558 (36%), Positives = 308/558 (55%), Gaps = 61/558 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L+ +Q+ ++WLW LHC+ +GG+LGD+MGLGKT+Q+ FLAGL S L+
Sbjct: 315 FKVPQSIWKKLYRYQKVSVQWLWELHCRNQGGLLGDEMGLGKTVQVIAFLAGLDCSELLS 374
Query: 354 ---------RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQYELQYVLQDK 402
+V+ P TL+ W+K L + G+ +Y L + LQ
Sbjct: 375 DGGRFRGLGPTIVICPATLMEQWVKHFHEWWPILRVVVLHQSGSYNGDLEY-LIHSLQCG 433
Query: 403 GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP 462
G+L+T+Y + N+ + L +S E W Y+ILDEGH I+NP + +K++ E
Sbjct: 434 GILVTSYSSMLNHKQIL-----VSAE-------WHYVILDEGHKIRNPQAKVSKAVKEFS 481
Query: 463 SAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRI 522
+ HR++++G+P+QN+LKELW+LF+F P LG F E PI RG +A ++
Sbjct: 482 TPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAGPITRGGYANASPLQEAT 541
Query: 523 GSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL 582
VA LR+ I PY LRR K +V H +L +KNE +++ LT Q++LY+ +L
Sbjct: 542 ALHVATMLRDAITPYMLRRTKQDVQHH------VSLPEKNEQVLFCSLTEEQKKLYKKYL 595
Query: 583 NSEIV-----------LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
SE V + L AL+ L+KIC+HP L D + E
Sbjct: 596 CSEDVSFVLHEKKYVETGRYRARLLIALSALRKICNHPDLFVYSTPLD---------SDE 646
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
D ++E + E + ++ S K+ + SLL +GH L+F+Q R+M++
Sbjct: 647 DINMSE-------ESLETFGYWKR----SGKMIVVQSLLKIWKKQGHRALLFTQGRQMMH 695
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+++ + + Y +LR+DGTT S R + + F + +FLLT++VGGLG+ LT A+RV
Sbjct: 696 ILESLVQHEKYSYLRMDGTTPMSQRQETIRLFNDDSSYFVFLLTTRVGGLGVNLTGANRV 755
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH 811
I+ DP WNP+TD Q+ +RA+RIGQ K+V +YRL+T GT+EEKIY +QIFK L E
Sbjct: 756 IIYDPDWNPATDAQARERAWRIGQSKNVTIYRLITAGTIEEKIYHRQIFKVLLSNKVLED 815
Query: 812 KEQIRYFSQQDLRELLSL 829
Q R F DL EL +
Sbjct: 816 PRQRRLFKTSDLVELFNF 833
>gi|344303600|gb|EGW33849.1| hypothetical protein SPAPADRAFT_133417 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1042
Score = 349 bits (895), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 219/605 (36%), Positives = 328/605 (54%), Gaps = 97/605 (16%)
Query: 276 DSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGK 335
D L+ +I+ + S + LPG I LF +Q+ ++WLW L+ Q GGI+GD+MGLGK
Sbjct: 243 DEWLKPHPTISDAILNSKFKLPGDIYPSLFDYQKTCVQWLWELYSQKTGGIIGDEMGLGK 302
Query: 336 TMQICGFLAGLFHSRLI-KRALVVAPKTLLSHWIKEL--------------TAVGLSAKI 380
T+QI F+AGL +S L+ K LVV P T+L+ W+ E G+ K+
Sbjct: 303 TIQIISFIAGLHYSGLLDKPVLVVVPATVLNQWVNEFHKWWPPLRCIILHSIGSGMGEKV 362
Query: 381 RE-----YFGT-----------CVKTR---QYELQYVLQDKGVLLTTYDIVRNNSKSLRG 421
E + T +K++ Q + V++ VL+TTY +R SK +
Sbjct: 363 SEEKLESFLETHDPHASTSSLRGIKSQINAQEIIDRVMEKGHVLITTYVGLRIYSKHILP 422
Query: 422 SSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKEL 481
W Y+ILDEGH I+NP + + + +I + +RII+SGTPIQNNL EL
Sbjct: 423 RE------------WGYVILDEGHKIRNPDSDISLTCKQIKTYNRIILSGTPIQNNLIEL 470
Query: 482 WALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRR 541
W+LF+F P LG F++++ +PI G +A + + + G A LR+ I PY LRR
Sbjct: 471 WSLFDFIFPGRLGTLPVFQQQFSIPINMGGYANASNVQVQTGYKCAVILRDLITPYLLRR 530
Query: 542 LKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAAL 599
LK++V + L KKNEM+++++LT Q+ LYE FL+SE + S G + L +
Sbjct: 531 LKSDVAQD--------LPKKNEMVLFVKLTRIQQDLYEKFLHSEELNSILKGKRNVLMGV 582
Query: 600 TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNI 659
+L+KIC+HP L+ + L K + + A+
Sbjct: 583 DMLRKICNHPDLINRE------------------ILMYKKGYNYGNPAK----------- 613
Query: 660 SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG-----------SKGY-KFLRI 707
S K+ + +LL + H L+F QTR+ML+++++ + S GY +LR+
Sbjct: 614 SGKMQVLKNLLQLWQSQNHKTLLFCQTRQMLDILEKFVANLHVLDEEGNDSTGYFNYLRM 673
Query: 708 DGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSV 767
DG T S R +V+ F +FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+
Sbjct: 674 DGGTPISKRQTLVDKFNTDLTQHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQAR 733
Query: 768 DRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELL 827
+RA+R+GQK+D+ +YRLMT G++EEKIY +QIFK L + +Q R+F DL +L
Sbjct: 734 ERAWRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFKINDLHDLF 793
Query: 828 SLPKQ 832
+L Q
Sbjct: 794 TLGDQ 798
>gi|308512703|gb|ADO33005.1| cockayne syndrome protein [Biston betularia]
Length = 954
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/527 (37%), Positives = 293/527 (55%), Gaps = 61/527 (11%)
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL--- 351
++P I L+ QR G++WLW LH GG+LGD+MGLGKT+QI FLAGL ++ +
Sbjct: 170 LVPNFIWKQLYKFQRTGVKWLWELHQVQAGGMLGDEMGLGKTIQIIAFLAGLSNTDMGSW 229
Query: 352 --IKRALVVAPKTLLSHWIKELT--AVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLT 407
+ +++VAP T++ W+ L + + G+ ++ + G++L
Sbjct: 230 GGLGPSIIVAPATVIYQWVSHFHFWCPHLRVAVLHHSGSHAGNHNKLIRDLHDSHGIVLI 289
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
TY + SK L W Y+ILDEGH I+NP TQ +K + + + H++
Sbjct: 290 TYAGIVKYSKDLMSRK------------WHYIILDEGHKIRNPDTQVSKLVKKFETPHKL 337
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
+I+G+P+QNNL+ELW+LF+F P LLG F E + PI +G +A + ++ +A
Sbjct: 338 LITGSPMQNNLQELWSLFDFMRPGLLGTYNAFMEHFAQPITQGGYANATEFQEATAMEIA 397
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
K L+ I PY LRR K+EV L +KNE +++ LT QR LY +L S V
Sbjct: 398 KALKIIITPYMLRRTKSEV------QEHIKLPEKNEQVLFCALTREQRDLYMGYLMSTTV 451
Query: 588 LSAFD-----GSPL-----AALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAE 637
S D G PL AL+ L+KIC+HP L A ED L+ +D E
Sbjct: 452 RSILDKENKYGEPLRARMLVALSTLRKICNHPDLYLYEAQED-LEAIDE----------E 500
Query: 638 KLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESI 697
K H S K++ + SLL +GH LIFSQ+R ML ++++ +
Sbjct: 501 KFG---------------HWKRSGKMTVVNSLLKIWQKQGHRALIFSQSRAMLCVLEQYL 545
Query: 698 GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPA 757
S+ +K+L++DG+ S R ++ F E +FL T++VGGLG+ LT ADRVIV DP
Sbjct: 546 QSQNFKYLKMDGSVLVSQRQSLIKTFNENAEYLVFLSTTRVGGLGVNLTGADRVIVYDPD 605
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
WNP+TD+Q+ +RA+RIGQ++ V VYRL+ GT+EEKIY++QIFK L
Sbjct: 606 WNPATDDQAKERAWRIGQERTVTVYRLLCAGTIEEKIYQRQIFKHFL 652
>gi|295662396|ref|XP_002791752.1| DNA repair and recombination protein RAD26 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226279878|gb|EEH35444.1| DNA repair and recombination protein RAD26 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1234
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 212/576 (36%), Positives = 306/576 (53%), Gaps = 85/576 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y +PG I + LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 413 YRVPGDIYHYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLT 472
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGLSAKIREYFGTC----------- 387
K +VV P T++ W+ E + G+ RE +
Sbjct: 473 KPIIVVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMINLRRESYADARLESQIWDPNQ 532
Query: 388 -------VKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
K + L VL VL+TTY ++ S S I E W I
Sbjct: 533 PRKATKEQKAAKKILDRVLAKGHVLVTTYSGLQTYS-----SLLIPVE-------WGCSI 580
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP T E+ +AHR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 581 LDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 640
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
++E PI +G +A + + + + A+ L++ I PY L+R K +V +A L K
Sbjct: 641 NQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPK 692
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAE 618
K+E +++ +LT QR Y+AFL S + S G L + +L+KIC+HP L
Sbjct: 693 KSEQVLFCKLTKIQRSAYQAFLGSNEMSSILRGRREALYGIDMLRKICNHPDL------- 745
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
PE L+ K + A+ S K+ + +LL+ GH
Sbjct: 746 -----------PEHKTLSTKPGYNYGSAAK-----------SGKMQVVKALLELWKETGH 783
Query: 679 NVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+F+Q R ML++++ I S G+K+ R+DG T R +V++F IFLLT++
Sbjct: 784 KSLLFAQHRIMLDILERFIKSMTGFKYQRMDGNTPIKLRQSLVDEFNNNPEIHIFLLTTK 843
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +
Sbjct: 844 VGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHR 903
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
QIFK L +Q + F DL +L +L G
Sbjct: 904 QIFKQFLTNKILRDPKQRQTFHMSDLHDLFTLGNDG 939
>gi|170593189|ref|XP_001901347.1| DNA excision repair protein ERCC-6 [Brugia malayi]
gi|158591414|gb|EDP30027.1| DNA excision repair protein ERCC-6, putative [Brugia malayi]
Length = 1103
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 205/559 (36%), Positives = 296/559 (52%), Gaps = 74/559 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA 355
+P L+ +Q+ G+RWL LH Q GGIL D+MGLGKT+Q+ FL GL S L R
Sbjct: 223 IPKDCWEKLYKYQKTGVRWLNELHNQCVGGILADEMGLGKTVQVISFLRGLAFSCLEDRG 282
Query: 356 ---------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCV------------KTRQYE 394
L++ P TL+ W+KE R +F C ++ Q
Sbjct: 283 FSFSGLGPVLIICPTTLIRQWLKEF---------RTWFPLCRVAILHISGSFHGQSAQLI 333
Query: 395 LQYVLQ--DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPST 452
+ V+ D VLLT+Y N K L D +W Y+ILDEGH I+NP
Sbjct: 334 RKMVVSQSDGSVLLTSYGTFAKNRKHL------------IDKVWHYIILDEGHKIRNPDA 381
Query: 453 QRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGND 512
Q ++ EI + HR+I+SG+P+QN+L+ELW+L +F P LG K F +K+ +PI +G
Sbjct: 382 QITLAVKEIRTPHRLILSGSPLQNSLRELWSLIDFVYPGRLGALKSFMDKFSIPITQGGY 441
Query: 513 KHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTS 572
+A + R A LR+ I PY LRRLK DV S L K E +++ +T
Sbjct: 442 ANATAVQVRTAYKCACILRDAINPYLLRRLKK------DVEMSIHLPTKTEQVLFCNITP 495
Query: 573 CQRQLYEAFLNSEIVLSAFDGS--PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP 630
CQR+LYE +L+S G L L+K+C+HP D++ G + N
Sbjct: 496 CQRKLYEEYLSSRECDRILSGKMDAFVGLITLRKLCNHP---------DLVTGGPNKFND 546
Query: 631 EDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKML 690
D E++ S K+ + +LL +G VL+FSQ+R+ML
Sbjct: 547 YDVTADEEMGFGAP-------------CRSGKMQVLKALLKLWKRQGQKVLLFSQSRQML 593
Query: 691 NLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADR 750
++++ + + Y++LR+DGTT R +V +F + + IFLLT++VGGLG+ LT A+R
Sbjct: 594 TILEKFVIQERYEYLRMDGTTVVRSRQLLVEEFNKNNKIFIFLLTTRVGGLGINLTGANR 653
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE 810
V++ DP WNPSTD Q+ +RA+RIGQ++ V +YRL+T GT+EEKIY +QIFK L
Sbjct: 654 VVIFDPDWNPSTDIQARERAWRIGQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILV 713
Query: 811 HKEQIRYFSQQDLRELLSL 829
Q R+F +L EL L
Sbjct: 714 DPRQRRFFKTNELHELFCL 732
>gi|190347304|gb|EDK39551.2| hypothetical protein PGUG_03649 [Meyerozyma guilliermondii ATCC
6260]
Length = 1117
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 209/585 (35%), Positives = 313/585 (53%), Gaps = 96/585 (16%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + LPG I LF +QR ++WLW L+ Q GGI+GD+MGLGKT+Q+ F+AGL +S L
Sbjct: 308 SQFRLPGDIYPSLFQYQRTCVQWLWELYSQKTGGIIGDEMGLGKTIQVVSFIAGLHYSGL 367
Query: 352 I-KRALVVAPKTLLSHWIKEL--------------TAVGLSAKI---REYFGTCVKTRQY 393
+ K +VV P T++ W+ E G+S E + +
Sbjct: 368 LDKPVIVVVPATVMMQWVNEFHTWWPPLRCAILHSIGSGMSKSALTSEEKIENMMANDDF 427
Query: 394 EL---QYVLQDKG----------------VLLTTYDIVRNNSKSLRGSSFISDEAGDDDA 434
+L +++ Q KG VL+TTY +R SK +
Sbjct: 428 DLNEDKFLAQQKGLSNAKNIVDRVVSKGHVLITTYVGLRVYSKYILPHQ----------- 476
Query: 435 IWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLG 494
W Y +LDEGH I+NP++ + ++ + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 477 -WGYAVLDEGHKIRNPNSHITLTCKQLKTHNRIILSGTPIQNNLIELWSLFDFVFPGRLG 535
Query: 495 DNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTS 554
F++++ +PI G +A + + + G A LR+ I PY LRRLK++V +
Sbjct: 536 TLPVFEQQFSIPINMGGYANASNVQVQTGYKCAVVLRDLISPYLLRRLKSDVAQD----- 590
Query: 555 SATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL 612
L KK EM+++++LT Q+ +YE FL+SE + + G + L + L+KIC+HP L+
Sbjct: 591 ---LPKKEEMVLFVKLTQYQQDMYEKFLSSEDLHAILKGKRNMLTGVDTLRKICNHPDLV 647
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
+ + K + N S K+ + LL
Sbjct: 648 DREL-----------------------------LLRKKGYNYGIPNKSGKMLVLKGLLQL 678
Query: 673 LIPEGHNVLIFSQTRKML--------NLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ 724
+GH L+F QT++ML NL + S G++ + ++R+DG+T S R +V+ F
Sbjct: 679 WQSQGHRTLLFCQTKQMLDILEKLLVNLTRISDGTEYFNYMRMDGSTPISKRQGLVDMFN 738
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+D+V+YRL
Sbjct: 739 NNTNYDVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKRDIVIYRL 798
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
MT GT+EEKIY +QIFK L + +Q R+F DL +L +L
Sbjct: 799 MTAGTIEEKIYHRQIFKTFLTNKILKDPKQRRFFKVNDLHDLFTL 843
>gi|290976692|ref|XP_002671073.1| predicted protein [Naegleria gruberi]
gi|284084639|gb|EFC38329.1| predicted protein [Naegleria gruberi]
Length = 998
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 222/655 (33%), Positives = 344/655 (52%), Gaps = 79/655 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQG--KGGILGDDMGLGKTMQICGFLAGLFHSRL 351
+ L I L+ HQ+ G++WL H KGG+L DDMGLGKT+QI F+ GLF ++
Sbjct: 301 FALSADIFEKLYSHQQIGVKWLVERHFASSLKGGLLADDMGLGKTIQISSFIHGLFLTQK 360
Query: 352 IKRALVVAPKTLLSHWIKELTAVG----LSAKIREYFGTCVKT--------RQYELQYVL 399
R LV+ P +++ +W KEL G I G T +++E +Y
Sbjct: 361 ASRVLVICPNSVVGNWQKELEKWGGDQIKGVVIFHQVGKASSTNRKRQGFVKEFE-KYAK 419
Query: 400 QDKGVLLTTYDIVRNN----SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRA 455
Q V+L+TY + N+ SKS G D + D +I+DE H IKN + +
Sbjct: 420 QGGAVMLSTYQTIANHVEYLSKSFSG-----------DKLLDSIIIDEAHKIKNKDAKCS 468
Query: 456 KSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPE-LLGDNKWFKEKYELPILRGNDKH 514
+L + SA + ++GTPI N L EL++++++C E LLG F Y PI + +
Sbjct: 469 MALKTLGSASKFGLTGTPIMNKLTELYSIYSWCFGEDLLGSVSEFSSNYSTPINQSTRRD 528
Query: 515 ALDREKRIGSAVAKELRERIQPYFLRRLKNEVF------HEDDVTSSATLSKKNEMIVWL 568
A +K G+ A +LRE ++PY L R KN V ++ +SA + +KN++IVW
Sbjct: 529 ANYTQKMAGNRAADDLRELVKPYLLMRGKNAVLTIDKNLYKSSSNTSAKIGQKNDLIVWC 588
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLT------------- 613
+LT Q+ Y+ +L+S+ V + S L + ILK++C+H ++ +
Sbjct: 589 KLTDEQQHWYKEYLSSDDVKQVLNKTMSALVGIVILKQVCNHAIMCSGYDEIMKKKKKEL 648
Query: 614 ----------KRAAEDVLD----------GMDSMLNPEDAALAEKLAMHIADVAE---KD 650
+ ED ++ MD + + + A+ +L D+ + ++
Sbjct: 649 EEEAKEDFGADSSDEDFIEESEVAPSMSFDMDDLDDKQRKAMERRLKKIQDDLIKERIRN 708
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
+ EQ + S K + L++K EGH VLIFSQ +ML++I + S KF RIDG+
Sbjct: 709 EPIEQLISSSVKAQLVKHLVEKCNEEGHRVLIFSQYTRMLDIIGHVLKSMKVKFNRIDGS 768
Query: 711 -TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDR 769
T+ DR ++V++F E + F+L+SQ GG+GL L A RVI+VD +NPS D QSVDR
Sbjct: 769 VTRHQDRTQLVDEFNENEKIKCFILSSQAGGVGLNLVSASRVIIVDANFNPSIDEQSVDR 828
Query: 770 AYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
YRIGQK++V+VYRL++ GT+EE IY++Q+ K + +TAT Q RY S DL E+ +L
Sbjct: 829 CYRIGQKENVIVYRLISAGTIEEYIYKRQVSKTTVSRTATIASNQYRYLSHADLEEMFTL 888
Query: 830 PKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTL-GIAGVSHHSLLFSKTA 883
K S T +++ H + LE HI+ L + + G+S H +LF A
Sbjct: 889 KKTSH--SETCSRMNRIHSKDRRDCDGLEEHIESLKQMENVVGISDHDVLFCNQA 941
>gi|452988763|gb|EME88518.1| hypothetical protein MYCFIDRAFT_46188 [Pseudocercospora fijiensis
CIRAD86]
Length = 1208
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 202/570 (35%), Positives = 314/570 (55%), Gaps = 83/570 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+QI FLAGL +S I+
Sbjct: 394 FRIPGDIYPSLFDYQKTGVQWLWELYSQQVGGIIGDEMGLGKTIQIISFLAGLHYSGKIQ 453
Query: 354 RAL-VVAPKTLLSHWIKEL--------------TAVGLSAKIRE-YFGTCVKTRQYE--- 394
+ + VV P T++ W+ E + G+ RE + ++ Y
Sbjct: 454 KPIIVVCPATVMKQWVNEFHRWWPPLRVSILHTSGSGMLDVGRENRYEEALEAEDYSSKK 513
Query: 395 ------------LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
L V + VL+TTY ++ ++ L + W+Y +LD
Sbjct: 514 TLSKGQKAAKRILDTVTKQGHVLVTTYSGLQTYAELLIPTD------------WEYAVLD 561
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
EGH I+NP+T E+ + +R+I+SGTP+QNNL ELW+LF+F P LG FK +
Sbjct: 562 EGHKIRNPNTAITIYCKELCTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFKNQ 621
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
+E+PI G +A + + A+ L++ I PY L+R K +V +A L KK+
Sbjct: 622 FEIPIKHGGYANASNLQVETAMKCAETLKDAISPYLLQRFKVDV--------AADLPKKS 673
Query: 563 EMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDV 620
E +++ +LT QR+ Y+ FL+SE + S +G L + IL+KIC+HP L+ R
Sbjct: 674 ERVLFCKLTKLQREAYQWFLDSEDMKSIMNGKRQALYGVDILRKICNHPDLVEHRT---- 729
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
+++K ++ S K+ + SLL + +GH
Sbjct: 730 -------------------------LSKKSEYNYGDGRKSGKMQVVKSLLQEWKRDGHKT 764
Query: 681 LIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
L+F+Q R ML++++ IG+ G+ + R+DGTT +R +V++F +FLLT++VG
Sbjct: 765 LLFAQHRIMLDILERFIGNMAGFSYRRMDGTTPIKERQNLVDEFNNDPDLHVFLLTTKVG 824
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLG+ LT A+RVI+ DP WNPSTD Q+ +RA+R+GQK++V++YRLMT GT+EEKIY +QI
Sbjct: 825 GLGVNLTGANRVIIYDPDWNPSTDVQARERAWRLGQKREVLIYRLMTAGTIEEKIYHRQI 884
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
FK L + +Q + F +DL +L +L
Sbjct: 885 FKQFLTNKILKDPKQRQTFQLKDLHDLFTL 914
>gi|146416597|ref|XP_001484268.1| hypothetical protein PGUG_03649 [Meyerozyma guilliermondii ATCC
6260]
Length = 1117
Score = 345 bits (886), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 209/585 (35%), Positives = 313/585 (53%), Gaps = 96/585 (16%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + LPG I LF +QR ++WLW L+ Q GGI+GD+MGLGKT+Q+ F+AGL +S L
Sbjct: 308 SQFRLPGDIYPSLFQYQRTCVQWLWELYLQKTGGIIGDEMGLGKTIQVVSFIAGLHYSGL 367
Query: 352 I-KRALVVAPKTLLSHWIKEL--------------TAVGLSAKI---REYFGTCVKTRQY 393
+ K +VV P T++ W+ E G+S E + +
Sbjct: 368 LDKPVIVVVPATVMMQWVNEFHTWWPPLRCAILHSIGSGMSKSALTSEEKIENMMANDDF 427
Query: 394 EL---QYVLQDKG----------------VLLTTYDIVRNNSKSLRGSSFISDEAGDDDA 434
+L +++ Q KG VL+TTY +R SK +
Sbjct: 428 DLNEDKFLAQQKGLSNAKNIVDRVVSKGHVLITTYVGLRVYSKYILPHQ----------- 476
Query: 435 IWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLG 494
W Y +LDEGH I+NP++ + ++ + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 477 -WGYAVLDEGHKIRNPNSHITLTCKQLKTHNRIILSGTPIQNNLIELWSLFDFVFPGRLG 535
Query: 495 DNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTS 554
F++++ +PI G +A + + + G A LR+ I PY LRRLK++V +
Sbjct: 536 TLPVFEQQFSIPINMGGYANASNVQVQTGYKCAVVLRDLISPYLLRRLKSDVAQD----- 590
Query: 555 SATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL 612
L KK EM+++++LT Q+ +YE FL+SE + + G + L + L+KIC+HP L+
Sbjct: 591 ---LPKKEEMVLFVKLTQYQQDMYEKFLSSEDLHAILKGKRNMLTGVDTLRKICNHPDLV 647
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
+ + K + N S K+ + LL
Sbjct: 648 DREL-----------------------------LLRKKGYNYGIPNKSGKMLVLKGLLQL 678
Query: 673 LIPEGHNVLIFSQTRKML--------NLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ 724
+GH L+F QT++ML NL + S G++ + ++R+DG+T S R +V+ F
Sbjct: 679 WQSQGHRTLLFCQTKQMLDILEKLLVNLTRISDGTEYFNYMRMDGSTPISKRQGLVDMFN 738
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+D+V+YRL
Sbjct: 739 NNTNYDVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKRDIVIYRL 798
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
MT GT+EEKIY +QIFK L + +Q R+F DL +L +L
Sbjct: 799 MTAGTIEEKIYHRQIFKTFLTNKILKDPKQRRFFKVNDLHDLFTL 843
>gi|303390601|ref|XP_003073531.1| DNA repair and recombination protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303302678|gb|ADM12171.1| DNA repair and recombination protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 688
Score = 345 bits (886), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 206/560 (36%), Positives = 320/560 (57%), Gaps = 53/560 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P + N LF +QR+G+ W+ L+ + KGG+L DDMGLGKT+Q+ FLA LFH++ I+
Sbjct: 133 FEIPDFLWNSLFEYQRDGVAWMLGLYKREKGGVLADDMGLGKTIQMIVFLAVLFHNKSIE 192
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD-KGVLLTTYDIV 412
+AL++ P T++S W+ E +R +FG + +D +GV L +Y+
Sbjct: 193 KALILCPATIVSQWMAEWKR--FYPFVRVFFG-----------FPAEDCRGVYLMSYEKF 239
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGT 472
+ +K D +WD ++LDEGH IKN + Q S+ ++ S R ++SGT
Sbjct: 240 KARAK---------------DLLWDTLVLDEGHKIKNRNAQITLSVKKVRSRSRFVLSGT 284
Query: 473 PIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
PIQNNL ELW++F+F P LLG + F E++E I RG K A + + + LR
Sbjct: 285 PIQNNLGELWSMFDFVNPGLLGSHTSFHEEFEEIIRRGGYKSASNLQVEKAYRHSLMLRS 344
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD 592
I+PY LRR K+++ H+ L K + I++ LT Q +LY L S+ ++
Sbjct: 345 LIEPYILRRTKSQISHK--------LPSKEDKIIFCTLTPIQIELYNRILESKHIMKVLI 396
Query: 593 GSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
G L+ +++L+K+C+HP L R DG + + + A EK + +K+
Sbjct: 397 GKANLLSGISMLRKVCNHPRLFIPRKE----DGSEDL---SEEASGEKNNEETLGLLKKE 449
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
+ Q + SCKI ++ LL K EG+ VL+FSQT +ML++I++ + + Y +LR+DG
Sbjct: 450 ESQYGLVSSSCKIKILMDLLKKWKSEGNKVLVFSQTIRMLDIIEKCV--EKYAYLRMDGR 507
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T S R +V+ F + D +FLLT++VGGLGL LT A R+++ DP WNPSTD Q+ +RA
Sbjct: 508 TSTSSRSSLVDRFNKDDSIFMFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQAKERA 567
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL- 829
+R GQ+K V +YR + T+EEK+Y+KQIFK L K + R+F++ + EL S
Sbjct: 568 WRYGQRKGVEIYRFICKDTIEEKVYQKQIFKDLLGKKVLSNPGLSRFFNKSCINELFSFT 627
Query: 830 PKQGFDVSLTQQQLHEEHGD 849
+GF + + HEE D
Sbjct: 628 ATRGF----AEVKTHEEDND 643
>gi|452839797|gb|EME41736.1| hypothetical protein DOTSEDRAFT_73948 [Dothistroma septosporum
NZE10]
Length = 1271
Score = 345 bits (885), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 203/570 (35%), Positives = 314/570 (55%), Gaps = 83/570 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLI 352
Y +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+QI FLAGL +S ++
Sbjct: 446 YRVPGDIYPSLFDYQKTGVQWLWELYAQQVGGIIGDEMGLGKTIQIISFLAGLHYSGKID 505
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGLSAKIRE-----------YFGTC 387
K +VV P T++ W+ E + G+ RE +
Sbjct: 506 KPVVVVCPATVMKQWVNEFHRWWPPLRVSILHTSGSGMLDVRREESFEDDLEEDGFSRKS 565
Query: 388 VKTRQYE-----LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
++ Y+ + VL+D VL+TTY ++ ++ L + W Y +LD
Sbjct: 566 THSKGYKQAKRIVDKVLRDGHVLVTTYSGLQTYAELLIPTD------------WQYAVLD 613
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
EGH I+NP+T E+ + +R+I+SGTP+QNNL ELW+LF+F P LG FK +
Sbjct: 614 EGHKIRNPNTAITIYCKELRTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFKNQ 673
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
+E+PI +G +A + + A+ L++ I PY L+R K +V +A L KK+
Sbjct: 674 FEIPIRQGGYANASNLQVETAMKCAETLKDAISPYLLQRFKVDV--------AADLPKKS 725
Query: 563 EMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDV 620
E +++ +LT QR YE FLNSE + S G L + IL+KIC+HP L+ +
Sbjct: 726 ERVLFCKLTKLQRDAYEWFLNSEDMKSIMAGKRQALYGIDILRKICNHPDLVEHKT---- 781
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
+++K +++ + K+ + +LL+ GH
Sbjct: 782 -------------------------LSKKTNYKYGIGSKCGKMQVVKALLEIWKRNGHKT 816
Query: 681 LIFSQTRKMLNLIQESI-GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
L+F+Q R ML+++++ + G +G+ + R+DG T DR +V++F + +FLLT++VG
Sbjct: 817 LLFAQHRIMLDILEKFVQGMEGFNYRRMDGNTSIKDRQDLVDEFNKDPDLHVFLLTTKVG 876
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +QI
Sbjct: 877 GLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVEIYRLMTAGTIEEKIYHRQI 936
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
FK L +Q + F +DL +L +L
Sbjct: 937 FKQFLSNKILRDPKQRQTFQLRDLHDLFTL 966
>gi|344232266|gb|EGV64145.1| hypothetical protein CANTEDRAFT_122352 [Candida tenuis ATCC 10573]
Length = 1010
Score = 345 bits (885), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 211/586 (36%), Positives = 315/586 (53%), Gaps = 100/586 (17%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI- 352
+ LPG I LF +Q+ ++WLW L+ Q GGI+GD+MGLGKT+Q+ F+AGL +S L+
Sbjct: 255 FKLPGDIHPSLFDYQKTCVQWLWELYNQKTGGIIGDEMGLGKTIQVISFIAGLHYSGLLE 314
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGLSAKIRE------------YFGT 386
K L+V P T+L+ W+ E G+ KI E G
Sbjct: 315 KPVLIVVPATVLNQWVNEFHKWWPALRCVILHSIGSGMGQKIDENKLEQFLQQEEGATGK 374
Query: 387 CVK------TRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
K Q + V++ VL+TTY +R SK L S W Y +
Sbjct: 375 VFKGVRTQINAQQVVNSVMESGHVLITTYVGLRIYSKHLLTKS------------WGYCV 422
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP+++ + + +A+RII+SGTPIQNNL ELW+LF+F P LG F+
Sbjct: 423 LDEGHKIRNPNSEISLLCKRVKTANRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFE 482
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
+++ LPI G +A + + + A LR+ I PY LRRLK++V + L K
Sbjct: 483 QQFSLPINMGGYANASNLQVQTSYKCATILRDLISPYLLRRLKHDV--------ARDLPK 534
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAE 618
K EM+++++LT Q+Q+YE+FL SE + + G + L + +L+KIC+HP
Sbjct: 535 KEEMVLFVKLTHYQQQMYESFLESEDLRAIMKGKRNMLMGVDVLRKICNHP--------- 585
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
D+++G S ED +++ S K+ L+ H
Sbjct: 586 DLVNGNKS---SEDYGNSKR---------------------SGKMEVTRKLIQLWALHNH 621
Query: 679 NVLIFSQTRKMLNLIQESI------------GSKGYKFLRIDGTTKASDRVKIVNDFQEG 726
+LIF QTR+ML++++ + + +++LR+DGTT R +V+ F
Sbjct: 622 KMLIFCQTRQMLDILERFLHRITKIDGNNMETGEPFEYLRMDGTTPIGKRQYLVDRFNTD 681
Query: 727 DVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMT 786
+FLLT++VGGLG+ LT ADR+I+ DP WNPSTD Q+ +RA+R+GQK+D+V+YRLM
Sbjct: 682 PKISVFLLTTKVGGLGINLTGADRIIIYDPDWNPSTDMQARERAWRLGQKRDIVIYRLMI 741
Query: 787 CGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQ 832
G++EEKIY +QIFK L + +Q R+F DL +L SL Q
Sbjct: 742 TGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFKMNDLHDLFSLGDQ 787
>gi|50309923|ref|XP_454975.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644110|emb|CAH00062.1| KLLA0E22617p [Kluyveromyces lactis]
Length = 1033
Score = 345 bits (885), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 236/685 (34%), Positives = 356/685 (51%), Gaps = 108/685 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
+M+PG I +LFP+Q+ ++WL L+ QG GGI+GD+MGLGKT+QI FLA L HSR L
Sbjct: 255 FMVPGDIFPLLFPYQKTCVQWLCELYQQGCGGIIGDEMGLGKTIQIIAFLATLHHSRKLN 314
Query: 353 KRALVVAPKTLLSHWIKE------------LTAVGLSAK--------------IREYFGT 386
LVV P T++ W E L ++G + +GT
Sbjct: 315 GPVLVVCPATVMKQWCNEFHTWWPPFRAVILHSIGAGMNKGTQIPEEELEKMLMTSNYGT 374
Query: 387 CV--------KTR---------QYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEA 429
KTR + L+ V+ D +++TTY +R +S++L
Sbjct: 375 FTYNDYEKKEKTRTSLESRKSVKKLLEKVITDGHIIITTYVGLRLHSEALL--------- 425
Query: 430 GDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCC 489
+ W Y ILDEGH I+NP + + + ++ + +RII+SGTPIQNNL ELW+LF+F
Sbjct: 426 ---NVRWGYAILDEGHKIRNPDSDISLTCKQLKTQNRIILSGTPIQNNLTELWSLFDFVY 482
Query: 490 PELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHE 549
P LG F++++ PI G +A + + + G A LR+ I PY LRR+K++V
Sbjct: 483 PGKLGTLPVFQQQFANPINMGGYANASNIQVKTGYKCAVALRDLISPYLLRRVKSDV--- 539
Query: 550 DDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICD 607
+ L KKNEM+++ +LT Q+ Y FL+S+ ++ G L + IL+KIC+
Sbjct: 540 -----AKDLPKKNEMVLFCKLTQYQKSKYLEFLHSDELMKIRKGKRQVLYGIDILRKICN 594
Query: 608 HPLLLTKRAAEDVLDGMDSMLNP-EDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFI 666
HP D+LD +N EDA S K+ +
Sbjct: 595 HP---------DLLDLKRKKMNDYEDADYGNPAR-------------------SGKMQVV 626
Query: 667 LSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVN 721
LL +GH L+F+Q+R+ML+++QE I K KFLR+DGTT R +V+
Sbjct: 627 KQLLLLWHSQGHKTLLFTQSRQMLDILQEFISYKDPELSDLKFLRMDGTTNIGSRQSLVD 686
Query: 722 DFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 781
F + +FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +
Sbjct: 687 KFN-NEPYDVFLLTTRVGGLGINLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVTI 745
Query: 782 YRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL-PKQGFDVSLTQ 840
YRLM G++EEKIY +QIFK L + +Q R+F DL +L +L G++
Sbjct: 746 YRLMIAGSIEEKIYHRQIFKQFLSNKILKDPKQKRFFKMNDLHDLFTLGGDNGYETEEFN 805
Query: 841 QQLHEEHGDQHNMDESLEAHIQFLDTLG-IAGVSHHSLLFSKTARVQVVQEEEEATRRKG 899
Q++ ++ G N+ ++ + D L I+GV H L ++ Q ++ E R G
Sbjct: 806 QEIVKQTG---NIKQNKTSETDDFDKLSQISGV--HKLEGFFNSKEQDEKQSTEDDRIMG 860
Query: 900 TAFVGNSSSSYLVARNVDGAEYAFN 924
+ F +S ++ GAE N
Sbjct: 861 SLFSSANSVDTNERDDIIGAEATRN 885
>gi|258577009|ref|XP_002542686.1| hypothetical protein UREG_02202 [Uncinocarpus reesii 1704]
gi|237902952|gb|EEP77353.1| hypothetical protein UREG_02202 [Uncinocarpus reesii 1704]
Length = 1203
Score = 345 bits (884), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 211/576 (36%), Positives = 303/576 (52%), Gaps = 85/576 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y +PG I LF +Q+ G++WLW LH Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 392 YRIPGDIYPYLFDYQKTGVQWLWELHQQRVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLT 451
Query: 353 KRALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTC---VKTRQYE------------- 394
+VV P T++ W+ E L I G+ +K Y
Sbjct: 452 GPVIVVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMVNIKKESYAEDRLMSEIWEPDR 511
Query: 395 --------------LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
L+ VL+D VL+TTY ++ + L W I
Sbjct: 512 PTRLPGGQKGARRILKRVLEDGHVLITTYAGLQTYASLLIPVD------------WSCAI 559
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP T E+ +AHR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 560 LDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 619
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
++E PI G +A + + + + A+ L++ I PY L+R K +V +A L K
Sbjct: 620 NQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPK 671
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAE 618
K E +++ +LT QR YEAFL S + S G L + IL+KIC+HP L
Sbjct: 672 KTEQVLFCKLTRVQRAAYEAFLGSNEMASIMRGRRDVLYGVDILRKICNHPDL------- 724
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
PE L++K D+ S K+ + SL++ GH
Sbjct: 725 -----------PEHRTLSQK-----------SDYNYGSGVKSGKMQVVKSLIELWKETGH 762
Query: 679 NVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+F+Q R ML+++++ + S G+ + R+DG T R IV++F +FLLT++
Sbjct: 763 KTLLFAQHRIMLDILEKFMKSLPGFNYRRMDGNTPIKIRQSIVDEFNTDPDIHVFLLTTK 822
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +
Sbjct: 823 VGGLGVNLTGADRVIIYDPDWNPSTDLQARERAWRLGQKREVTIYRLMTAGTIEEKIYHR 882
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
QIFK L + +Q + F DL +L +L G
Sbjct: 883 QIFKQFLTNKILKDPKQRQTFQMSDLHDLFTLGNDG 918
>gi|324502629|gb|ADY41155.1| DNA excision repair protein ERCC-6, partial [Ascaris suum]
Length = 1156
Score = 345 bits (884), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 199/555 (35%), Positives = 298/555 (53%), Gaps = 56/555 (10%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
+S +P N LF +Q+ G+RWL LH Q GGIL D+MGLGKT+Q+ FL L S+
Sbjct: 252 KSGLRVPNVCWNKLFKYQKTGVRWLSELHEQCVGGILADEMGLGKTIQVICFLRALAFSQ 311
Query: 351 LIKRA---------LVVAPKTLLSHWIKELTAVGLSAKIREYFGT-CVKTRQYEL----Q 396
R L++ P TL+ W+KE +I + C + Q L
Sbjct: 312 AETRGFGFRGLGPVLLICPTTLMHQWLKEFHNWFPLCRIAVLHSSGCFRGPQSHLLSKFS 371
Query: 397 YVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+D LLT+Y K+L +A W Y+ILDEGH I+NP Q +
Sbjct: 372 TYRKDGCTLLTSYSTFTKKRKALA------------NANWHYVILDEGHKIRNPGAQMTR 419
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
++ E+ + HR+I++G+P+QN+LKELW+L +F P LG + F EK+ +PI +G +A
Sbjct: 420 AVKEVRTPHRLILTGSPLQNSLKELWSLMDFVYPGRLGALQTFTEKFAIPITQGGYANAS 479
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+ R A LR+ I PY LRR+K DV + L K E +++ +T CQR
Sbjct: 480 AIQVRTAYKCACVLRDAINPYILRRMKK------DVEMTVQLPSKTEQVLFCNITPCQRT 533
Query: 577 LYEAFLNSEIVLSAFDGS--PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAA 634
Y+ +++S G L L+K+C+HP D++ G + N +
Sbjct: 534 FYKDYISSRECARILAGGMDAFVGLITLRKLCNHP---------DLVTGGPNKHNEYNVT 584
Query: 635 LAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQ 694
L E++ A + S K+ + +LL + VL+FSQ+R+ML L++
Sbjct: 585 LDEEMDFGAA-------------SRSGKMIVLKALLKLWKDQNQKVLLFSQSRQMLTLLE 631
Query: 695 ESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVV 754
+ + +GY++LR+DG+T R +V F + +FLLT++VGGLG+ LT A+RV++
Sbjct: 632 KFVIKEGYEYLRMDGSTPIGSRQPLVEKFNTNEDIFLFLLTTKVGGLGVNLTGANRVVIF 691
Query: 755 DPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQ 814
DP WNPSTD Q+ +RA+RIGQ++ V VYRL+T GT+EEKIY++QIFK L +Q
Sbjct: 692 DPDWNPSTDVQARERAWRIGQERAVTVYRLLTSGTIEEKIYQRQIFKQFLANRVLVDPKQ 751
Query: 815 IRYFSQQDLRELLSL 829
R+F DL EL +L
Sbjct: 752 RRFFKTNDLHELFTL 766
>gi|356545882|ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
max]
Length = 1210
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 208/598 (34%), Positives = 317/598 (53%), Gaps = 94/598 (15%)
Query: 276 DSVLEDEGS--ITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGL 333
D L+D+ S +TL G +P I LF +Q+ G++WLW LHCQ GGI+GD+MGL
Sbjct: 365 DVELDDQESSYVTLEG---GLKIPDNIFEALFDYQKVGVQWLWELHCQRAGGIIGDEMGL 421
Query: 334 GKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKEL---------------------- 371
GKT+Q+ FL L S + K +++V P TLL W +E
Sbjct: 422 GKTVQVLSFLGALHFSGMYKPSIIVCPVTLLRQWKREAKKWYPKFHVELLHDSAQDSAPR 481
Query: 372 --------TAVGLSAKIREYFGTCV---KTRQYE--LQYVLQ-DKGVLLTTYDIVRNNSK 417
T ++K + V TR++E + V++ + G+L+TTY+ +R
Sbjct: 482 KKRAKSEETDYESNSKSDSDYEKSVASKSTRKWESLINRVMRSESGLLITTYEQLR---- 537
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
+ G + D W Y +LDEGH I+NP+ + ++ + HRII++G PIQN
Sbjct: 538 -ILGEQLL-------DIQWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNK 589
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELW+LF+F P LG F+ ++ +PI G +A + A LR+ I PY
Sbjct: 590 LTELWSLFDFVFPGKLGVLPVFEAEFSVPISVGGYANASPLQVSTAYRCAVVLRDLIMPY 649
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SP 595
LRR+K +V +A L KK E +++ LTS Q Y AFL S V DG +
Sbjct: 650 LLRRMKADV--------NAQLPKKTEHVLFCSLTSEQVSAYRAFLASTDVEQILDGHRNS 701
Query: 596 LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQ 655
L + +++KIC+HP LL + D N D E+
Sbjct: 702 LYGIDVMRKICNHPDLLER----------DHAFNDPDYGNPER----------------- 734
Query: 656 HDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASD 715
S K+ + +L+ +GH VL+F+QT++MLN+ + + + G+ + R+DG T
Sbjct: 735 ----SGKMKVVAQVLNVWKEQGHRVLLFTQTQQMLNIFENFLTTSGHIYRRMDGLTPVKQ 790
Query: 716 RVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ 775
R+ ++++F + IF+LT++VGGLG LT A+RVI+ DP WNPSTD Q+ +RA+RIGQ
Sbjct: 791 RMALIDEFNDSSEIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQ 850
Query: 776 KKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
K+DV VYRL+T GT+EEK+Y +QI+K L ++ +Q R+F +D+++L +L G
Sbjct: 851 KRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFTLNVDG 908
>gi|315041194|ref|XP_003169974.1| DNA repair and recombination protein RAD26 [Arthroderma gypseum CBS
118893]
gi|311345936|gb|EFR05139.1| DNA repair and recombination protein RAD26 [Arthroderma gypseum CBS
118893]
Length = 1226
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 309/575 (53%), Gaps = 84/575 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y LPG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAG+ +S+ +K
Sbjct: 387 YQLPGDIHPYLFDYQKTGVKWLWELYQQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKLK 446
Query: 354 RAL-VVAPKTLLSHWIKE-------------------LTAVGLSAKIREYFGTCV----- 388
+ VV P T++ W+ E + + ++ + + + V
Sbjct: 447 GPIIVVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGVWGDRN 506
Query: 389 -------KTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMIL 441
K + L+ VL+D VL+TTY ++ S S I + W +L
Sbjct: 507 ATSQRGNKAARRILKRVLEDGHVLVTTYAGLQTYS-----SLLIPVD-------WGIAVL 554
Query: 442 DEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKE 501
DEGH I+NP T E+ ++HR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 555 DEGHKIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRN 614
Query: 502 KYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKK 561
++ELPI G +A + + + + A+ L++ I PY L+R K +V +A L KK
Sbjct: 615 QFELPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDV--------AADLPKK 666
Query: 562 NEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAED 619
+E +++ +LT QR YEAFL S + S G L + +L+KIC+HP L +
Sbjct: 667 SEQVLFCKLTKVQRAAYEAFLASGEMSSILRGRREALYGIDMLRKICNHPDLTQHKI--- 723
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
+++K D+ S K+ + SLL+ GH
Sbjct: 724 --------------------------LSQKTDYNYGSGAKSGKMQVVKSLLELWKETGHK 757
Query: 680 VLIFSQTRKMLNLIQESI-GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
L+F+Q R ML++++ I G G+ + R+DG T R +V++F +FLLT++V
Sbjct: 758 TLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKARQSMVDEFNNDPDLHVFLLTTKV 817
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +Q
Sbjct: 818 GGLGVNLTGADRVIIYDPDWNPSTDMQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQ 877
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
IFK L +Q + F D+++L +L G
Sbjct: 878 IFKQFLTNKILRDPKQRQTFQMSDIQDLFTLGNDG 912
>gi|378733564|gb|EHY60023.1| DNA excision repair protein ERCC-6 [Exophiala dermatitidis
NIH/UT8656]
Length = 1204
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 216/625 (34%), Positives = 331/625 (52%), Gaps = 94/625 (15%)
Query: 253 RRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPR-------STYMLPGKIGNMLF 305
RR ++ + + + D+ DD L E + L P+ Y +PG I LF
Sbjct: 336 RRMARMKAAGETNDGDKDDELPDDQTLVQE-EMYLPHPKIPDTVFTHDYKIPGDIYPSLF 394
Query: 306 PHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRAL-VVAPKTLL 364
+Q+ G++WL+ L+ Q GGI+ D+MGLGKT+QI FLAGL +S+ +++ + VV P T++
Sbjct: 395 GYQKTGVQWLYELYTQQVGGIIADEMGLGKTVQIIAFLAGLHYSKKLRKPIIVVCPATVM 454
Query: 365 SHWIKE--------------------------------LTAVGLSAKIR-EYFGTCVKTR 391
W+ E L + +R + + K
Sbjct: 455 KQWVNEFHRWWPPFRVTILHSSGSGMINIRNEASKEDKLLDLAFDPTVRNKPLTSTQKAA 514
Query: 392 QYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPS 451
Q ++ +L++ GVL+TTY ++ + L I E WDY ILDEGH I+NP+
Sbjct: 515 QKMIRPILEEGGVLVTTYTGLQTYAPLL-----IPVE-------WDYAILDEGHKIRNPN 562
Query: 452 TQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGN 511
T E+ + +RII+SGTP+QNNL ELW+LF+F P LG F+ ++E+PI +G
Sbjct: 563 TAITIYCKELRTPNRIILSGTPMQNNLIELWSLFDFVFPMRLGTLVNFRNQFEIPIRQGG 622
Query: 512 DKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLT 571
+A + + + A+ L+E I PY L+R K +V ++ L KK+E +V+ LT
Sbjct: 623 YANASNLQVQTAFKCAETLKEAISPYLLQRFKVDV--------ASDLPKKSEKVVFCNLT 674
Query: 572 SCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLN 629
QR Y+ FL+S+ + + +G PL + IL+KIC+HP L +
Sbjct: 675 PLQRAEYQRFLDSKEMEAIINGRRQPLYGIDILRKICNHPDLANHKY------------- 721
Query: 630 PEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKM 689
LA K D A+ S K++ + +LL EGH L+F+Q R M
Sbjct: 722 -----LAHKPGYKYGDPAK-----------SGKMTVVGALLKSWKGEGHKTLLFAQHRIM 765
Query: 690 LNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKA 748
L+++++ + S G+K+ R+DG T R +V++F +FLLT++VGGLG+ LT A
Sbjct: 766 LDILEKFVKSLDGFKYRRMDGNTPIPLRQSMVDEFNTDPDLHVFLLTTKVGGLGINLTGA 825
Query: 749 DRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA 808
DRVI+ DP WNPSTD Q+ +RA+R+GQK++V + RLM GT+EEKIY +QIFK L
Sbjct: 826 DRVIIYDPDWNPSTDLQARERAWRLGQKREVTICRLMIAGTIEEKIYHRQIFKQFLTNKI 885
Query: 809 TEHKEQIRYFSQQDLRELLSLPKQG 833
+ +Q + F DL +L SL +G
Sbjct: 886 LKDPKQRQTFHLNDLHDLFSLGNEG 910
>gi|327302918|ref|XP_003236151.1| DNA repair protein Rhp26/Rad26 [Trichophyton rubrum CBS 118892]
gi|326461493|gb|EGD86946.1| DNA repair protein Rhp26/Rad26 [Trichophyton rubrum CBS 118892]
Length = 1225
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 203/575 (35%), Positives = 305/575 (53%), Gaps = 84/575 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y LPG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAG+ +S+ +K
Sbjct: 385 YQLPGDIYPYLFDYQKTGVKWLWELYQQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKLK 444
Query: 354 RAL-VVAPKTLLSHWIKE-------------------LTAVGLSAKIREYFGTCV----- 388
+ VV P T++ W+ E + + ++ + + + V
Sbjct: 445 GPIIVVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGVWGDRN 504
Query: 389 -------KTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMIL 441
K + L+ VL+D VL+TTY ++ S L W +L
Sbjct: 505 STSQRGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLL------------IPVDWGIAVL 552
Query: 442 DEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKE 501
DEGH I+NP T E+ ++HR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 553 DEGHKIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRN 612
Query: 502 KYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKK 561
++E PI G +A + + + + A+ LR+ I PY L+R K +V +A L KK
Sbjct: 613 QFEFPIRTGGYANASNLQVQTAAKCAETLRDAISPYLLQRFKIDV--------AADLPKK 664
Query: 562 NEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAED 619
+E +++ +LT QR YEAFL S + S G L + +L+KIC+HP L +
Sbjct: 665 SEQVLFCKLTKVQRAAYEAFLASGEMSSILRGRREALYGIDMLRKICNHPDLTQHKI--- 721
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
++ K D+ S K+ + SLL+ GH
Sbjct: 722 --------------------------LSTKTDYNYGSGAKSGKMQVVKSLLELWKDTGHK 755
Query: 680 VLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
L+F+Q R ML++++ IG G+ + R+DG T R +V++F +FLLT++V
Sbjct: 756 TLLFAQHRIMLDILERFIGGFNGFNYRRMDGNTPIKVRQSMVDEFNNDPDLHVFLLTTKV 815
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +Q
Sbjct: 816 GGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQ 875
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
IFK L +Q + F D+++L +L G
Sbjct: 876 IFKQFLTNKILRDPKQRQTFQMSDIQDLFTLGNDG 910
>gi|398408155|ref|XP_003855543.1| SNF2 family DNA repair and recombination protein, partial
[Zymoseptoria tritici IPO323]
gi|339475427|gb|EGP90519.1| SNF2 family DNA repair and recombination protein [Zymoseptoria
tritici IPO323]
Length = 1207
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 202/570 (35%), Positives = 310/570 (54%), Gaps = 83/570 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLI 352
+ +PG I LF +Q+ G++WLW L Q GGI+GD+MGLGKT+QI FLAGL +S +L
Sbjct: 389 FRIPGDIYPSLFDYQKTGVQWLWELFSQQVGGIIGDEMGLGKTIQIISFLAGLHYSNKLT 448
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGL----------------SAKIRE 382
K +VV P T++ W+ E + G+ S + +
Sbjct: 449 KPIIVVCPATVMKQWVNEFHRWWPPLRVSILHTSGSGMLDLRRETSFEDELEEDSFQRKR 508
Query: 383 YFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
+ + L V++D VL+TTY ++ ++ L + W+Y +LD
Sbjct: 509 THSKGYNSAKRILNRVVRDGHVLVTTYSGLQTYAELLIPTD------------WEYAVLD 556
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
EGH I+NP+T E+ + +R+I+SGTP+QNNL ELW+LF+F P LG FK +
Sbjct: 557 EGHKIRNPNTSITIFCKELRTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFKSQ 616
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
+E+PI +G +A + + A+ L++ I PY L+R K +V +A L KK+
Sbjct: 617 FEVPIKQGGYANASNLQVETAMKCAETLKDTISPYLLQRFKVDV--------AADLPKKS 668
Query: 563 EMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDV 620
E +++ +LT QR YE FL S+ + S +G L + IL+KIC+HP L+ +
Sbjct: 669 ERVLFCKLTKLQRDAYEWFLRSDDMSSIMNGKRQALYGIDILRKICNHPDLVEHKT---- 724
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
+++K + + S K+ + +LL+ GH
Sbjct: 725 -------------------------LSKKTSYAYGTGSKSGKMQVVKALLEIWKRNGHKT 759
Query: 681 LIFSQTRKMLNLIQESI-GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
L+F+Q R ML++++ I G KG+ + R+DG T DR +V++F + +FLLT++VG
Sbjct: 760 LLFAQHRIMLDILESFIQGMKGFNYRRMDGNTSIKDRQDLVDEFNKDQNLHVFLLTTKVG 819
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +QI
Sbjct: 820 GLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVEIYRLMTAGTIEEKIYHRQI 879
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
FK L +Q + F +DL +L +L
Sbjct: 880 FKQFLTNKILRDPKQRQTFHLKDLHDLFTL 909
>gi|225682364|gb|EEH20648.1| DNA repair and recombination protein RAD26 [Paracoccidioides
brasiliensis Pb03]
Length = 1236
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 208/576 (36%), Positives = 307/576 (53%), Gaps = 85/576 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 413 YRVPGDIYPYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLT 472
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGL-SAKIREYFGTCVKTRQYE--- 394
K +VV P T++ W+ E + G+ + + Y ++++ ++
Sbjct: 473 KPIIVVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMINLRSESYADARLESQIWDPDQ 532
Query: 395 --------------LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
L VL VL+TTY ++ S L W I
Sbjct: 533 PRRATKEQKAAKKILDRVLAKGHVLVTTYSGLQTYSSLL------------IPVDWGCSI 580
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP T E+ +AHR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 581 LDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 640
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
++E PI +G +A + + + + A+ L++ I PY L+R K +V +A L K
Sbjct: 641 NQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPK 692
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAE 618
K+E +++ +LT QR Y+AFL S + S G L + +L+KIC+HP L
Sbjct: 693 KSEQVLFCKLTKIQRSAYQAFLGSNEMSSILRGRREALYGIDMLRKICNHPDL------- 745
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
PE L+ K + A+ S K+ + +LL+ GH
Sbjct: 746 -----------PEHKTLSTKPGYNYGSAAK-----------SGKMQVVKALLELWKETGH 783
Query: 679 NVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+F+Q R ML++++ I S G+K+ R+DG T R +V++F IFLLT++
Sbjct: 784 KSLLFAQHRIMLDILERFIKSMTGFKYQRMDGNTPIKLRQSLVDEFNNNPEIHIFLLTTK 843
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +
Sbjct: 844 VGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHR 903
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
QIFK L +Q + F DL +L +L G
Sbjct: 904 QIFKQFLTNKILRDPKQRQTFQMSDLHDLFTLGNDG 939
>gi|226289757|gb|EEH45241.1| DNA repair and recombination protein RAD26 [Paracoccidioides
brasiliensis Pb18]
Length = 1236
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 208/576 (36%), Positives = 307/576 (53%), Gaps = 85/576 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 413 YRVPGDIYPYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLT 472
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGL-SAKIREYFGTCVKTRQYE--- 394
K +VV P T++ W+ E + G+ + + Y ++++ ++
Sbjct: 473 KPIIVVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMINLRSESYADARLESQIWDPDQ 532
Query: 395 --------------LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
L VL VL+TTY ++ S L W I
Sbjct: 533 PRRATKEQKAAKKILDRVLAKGHVLVTTYSGLQTYSSLL------------IPVDWGCSI 580
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP T E+ +AHR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 581 LDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 640
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
++E PI +G +A + + + + A+ L++ I PY L+R K +V +A L K
Sbjct: 641 NQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPK 692
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAE 618
K+E +++ +LT QR Y+AFL S + S G L + +L+KIC+HP L
Sbjct: 693 KSEQVLFCKLTKIQRSAYQAFLGSNEMSSILRGRREALYGIDMLRKICNHPDL------- 745
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
PE L+ K + A+ S K+ + +LL+ GH
Sbjct: 746 -----------PEHKTLSTKPGYNYGSAAK-----------SGKMQVVKALLELWKETGH 783
Query: 679 NVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+F+Q R ML++++ I S G+K+ R+DG T R +V++F IFLLT++
Sbjct: 784 KSLLFAQHRIMLDILERFIKSMTGFKYQRMDGNTPIKLRQSLVDEFNNNPEIHIFLLTTK 843
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +
Sbjct: 844 VGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHR 903
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
QIFK L +Q + F DL +L +L G
Sbjct: 904 QIFKQFLTNKILRDPKQRQTFQMSDLHDLFTLGNDG 939
>gi|312071855|ref|XP_003138800.1| hypothetical protein LOAG_03215 [Loa loa]
Length = 1112
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 203/551 (36%), Positives = 293/551 (53%), Gaps = 58/551 (10%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA 355
+P L+ +Q+ G+RWL LH Q GGIL D+MGLGKT+Q+ FL L SRL R
Sbjct: 242 IPNDCWKKLYKYQKTGVRWLNELHNQCVGGILADEMGLGKTVQVISFLRALAFSRLEDRG 301
Query: 356 ---------LVVAPKTLLSHWIKE------LTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
L++ P TL+ W+KE L V + + G + + ++
Sbjct: 302 FSFFGLGPVLIICPTTLIHQWLKEFHTWFPLCRVAILHSSGSFHGQNPQLIR-KMVVARS 360
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
D VLLT+Y N K L D IW Y+ILDEGH I+NP Q ++ E
Sbjct: 361 DGNVLLTSYGTFARNRKHLV------------DKIWHYVILDEGHKIRNPEAQITLAVKE 408
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ + HR+I+SG+P+QN+L+ELW+L +F P LG F +K+ +PI +G +A +
Sbjct: 409 VRTPHRLILSGSPLQNSLRELWSLVDFVYPGRLGALHSFMDKFSIPITQGGYANATAVQV 468
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
R A LR+ I PY LRRLK DV S L K E +++ +T CQR LYE
Sbjct: 469 RTAYKCACILRDAINPYLLRRLKK------DVEMSIHLPTKTEQVLFCNITPCQRSLYEE 522
Query: 581 FLNSEIVLSAFDGS--PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
+L+S G L L+K+C+HP D++ G + N D ++ +
Sbjct: 523 YLSSHECSRILSGKTDAFVGLITLRKLCNHP---------DLITGGPNKFN--DYSVTAE 571
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
M S K+ + +LL + VL+FSQ+R+ML ++++ +
Sbjct: 572 NEMDFGAPCR-----------SGKMQVLKALLKLWKQQDQKVLLFSQSRQMLTILEKFVI 620
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
+GY++LR+DGTT R +V F + D IFLLT++VGGLG+ LT A+RV++ DP W
Sbjct: 621 QEGYEYLRMDGTTPVRSRQLLVEKFNKVDEIFIFLLTTRVGGLGINLTGANRVVIFDPDW 680
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQ++ V +YRL+T GT+EEKIY +QIFK L Q R+F
Sbjct: 681 NPSTDIQARERAWRIGQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILVDPRQRRFF 740
Query: 819 SQQDLRELLSL 829
+L EL L
Sbjct: 741 KTNELHELFCL 751
>gi|393911645|gb|EFO25268.2| hypothetical protein LOAG_03215 [Loa loa]
Length = 1113
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 203/551 (36%), Positives = 293/551 (53%), Gaps = 58/551 (10%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA 355
+P L+ +Q+ G+RWL LH Q GGIL D+MGLGKT+Q+ FL L SRL R
Sbjct: 242 IPNDCWKKLYKYQKTGVRWLNELHNQCVGGILADEMGLGKTVQVISFLRALAFSRLEDRG 301
Query: 356 ---------LVVAPKTLLSHWIKE------LTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
L++ P TL+ W+KE L V + + G + + ++
Sbjct: 302 FSFFGLGPVLIICPTTLIHQWLKEFHTWFPLCRVAILHSSGSFHGQNPQLIR-KMVVARS 360
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
D VLLT+Y N K L D IW Y+ILDEGH I+NP Q ++ E
Sbjct: 361 DGNVLLTSYGTFARNRKHLV------------DKIWHYVILDEGHKIRNPEAQITLAVKE 408
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ + HR+I+SG+P+QN+L+ELW+L +F P LG F +K+ +PI +G +A +
Sbjct: 409 VRTPHRLILSGSPLQNSLRELWSLVDFVYPGRLGALHSFMDKFSIPITQGGYANATAVQV 468
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
R A LR+ I PY LRRLK DV S L K E +++ +T CQR LYE
Sbjct: 469 RTAYKCACILRDAINPYLLRRLKK------DVEMSIHLPTKTEQVLFCNITPCQRSLYEE 522
Query: 581 FLNSEIVLSAFDGS--PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
+L+S G L L+K+C+HP D++ G + N D ++ +
Sbjct: 523 YLSSHECSRILSGKTDAFVGLITLRKLCNHP---------DLITGGPNKFN--DYSVTAE 571
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
M S K+ + +LL + VL+FSQ+R+ML ++++ +
Sbjct: 572 NEMDFGAPCR-----------SGKMQVLKALLKLWKQQDQKVLLFSQSRQMLTILEKFVI 620
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
+GY++LR+DGTT R +V F + D IFLLT++VGGLG+ LT A+RV++ DP W
Sbjct: 621 QEGYEYLRMDGTTPVRSRQLLVEKFNKVDEIFIFLLTTRVGGLGINLTGANRVVIFDPDW 680
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
NPSTD Q+ +RA+RIGQ++ V +YRL+T GT+EEKIY +QIFK L Q R+F
Sbjct: 681 NPSTDIQARERAWRIGQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILVDPRQRRFF 740
Query: 819 SQQDLRELLSL 829
+L EL L
Sbjct: 741 KTNELHELFCL 751
>gi|303315667|ref|XP_003067838.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107514|gb|EER25693.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1213
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 216/628 (34%), Positives = 327/628 (52%), Gaps = 95/628 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 400 YRIPGDIYPYLFDYQKTGVQWLWELYQQRVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLD 459
Query: 353 KRALVVAPKTLLSHWIKE------------LTAVG---------------LSAKIREYFG 385
+VV P T++ W+ E L G L+++I + +
Sbjct: 460 APIIVVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMINIKKESRAEDTLTSEIWDPYR 519
Query: 386 TC-----VKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
K + L+ VL+D VL+TTY ++ + L W I
Sbjct: 520 PTRMSGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIPVD------------WGCAI 567
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP T E+ + HR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 568 LDEGHKIRNPDTAITIHCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 627
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
++E PI G +A + + + + A+ L++ I PY L+R K +V +A L K
Sbjct: 628 NQFEFPIRAGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPK 679
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAE 618
K E +++ +LT QR YEAFL+S + + G L + IL+KIC+HP L
Sbjct: 680 KTEQVLFCKLTKLQRAAYEAFLSSNEMSAIMRGRRDVLFGVDILRKICNHPDL------- 732
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
PE L++K + + A+ S K+ + +LL+ GH
Sbjct: 733 -----------PEHKTLSQKANYNYGNSAK-----------SGKMQVVKALLELWRDTGH 770
Query: 679 NVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+F+Q R ML+++++ I S G+ + R+DG T R +V++F +FLLT++
Sbjct: 771 KTLLFAQHRIMLDILEKFIKSLTGFNYRRMDGNTPIKVRQGMVDEFNNDPDIHVFLLTTK 830
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+DV +YRLMT GT+EEKIY +
Sbjct: 831 VGGLGVNLTGADRVIIYDPDWNPSTDLQARERAWRLGQKRDVTIYRLMTAGTIEEKIYHR 890
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG----------FDVSLTQQQLHEEH 847
QIFK L + +Q + F DL +L +L G DV+ + HE+
Sbjct: 891 QIFKQFLTNKILKDPKQRQTFQMSDLHDLFTLGDNGPTETSKMFQEADVTFQENSKHEKD 950
Query: 848 GDQHNMDESLEAHIQFLDTLGIAGVSHH 875
+ ++E + + G+A + +
Sbjct: 951 TKESKVEEERKEKDKISKVTGVAALEQY 978
>gi|326471229|gb|EGD95238.1| DNA repair and recombination protein RAD26 [Trichophyton tonsurans
CBS 112818]
Length = 1225
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 202/575 (35%), Positives = 305/575 (53%), Gaps = 84/575 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y LPG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAG+ +S+ +K
Sbjct: 385 YQLPGDIYPYLFDYQKTGVKWLWELYQQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKLK 444
Query: 354 RAL-VVAPKTLLSHWIKE-------------------LTAVGLSAKIREYFGTCV----- 388
+ VV P T++ W+ E + + ++ + + + V
Sbjct: 445 GPIIVVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGVWGDRN 504
Query: 389 -------KTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMIL 441
K + L+ VL+D VL+TTY ++ S L W +L
Sbjct: 505 STSQRGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVD------------WGIAVL 552
Query: 442 DEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKE 501
DEGH I+NP T E+ ++HR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 553 DEGHKIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRN 612
Query: 502 KYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKK 561
++E PI G +A + + + + A+ L++ I PY L+R K +V +A L KK
Sbjct: 613 QFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDV--------AADLPKK 664
Query: 562 NEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAED 619
+E +++ +LT QR YEAFL S + S G L + +L+KIC+HP L +
Sbjct: 665 SEQVLFCKLTKVQRAAYEAFLASGEMSSILRGRREALYGIDMLRKICNHPDLTQHKV--- 721
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
++ K D+ S K+ + SLL+ GH
Sbjct: 722 --------------------------LSTKTDYNYGSGAKSGKMQVVKSLLELWKDTGHK 755
Query: 680 VLIFSQTRKMLNLIQESI-GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
L+F+Q R ML++++ I G G+ + R+DG T R +V++F +FLLT++V
Sbjct: 756 TLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKVRQSMVDEFNNDPDLHVFLLTTKV 815
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +Q
Sbjct: 816 GGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQ 875
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
IFK L +Q + F D+++L +L G
Sbjct: 876 IFKQFLTNKILRDPKQRQTFQMSDIQDLFTLGNDG 910
>gi|401828407|ref|XP_003887917.1| superfamily II DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998925|gb|AFM98936.1| superfamily II DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 687
Score = 342 bits (876), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 203/563 (36%), Positives = 310/563 (55%), Gaps = 52/563 (9%)
Query: 288 SGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF 347
S R + +PG + + LF +Q++G+ W+ L+ + KGG+L DDMGLGKT+Q+ FL+ LF
Sbjct: 127 SKIRQGFSVPGFLWDTLFEYQKDGVEWMLKLYKEEKGGVLADDMGLGKTVQMIVFLSVLF 186
Query: 348 HSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLT 407
S I R L++ P T++S WI E +R YFG ++ +GV L
Sbjct: 187 QSGYISRVLILCPATIVSQWILEWKR--FYPFVRVYFGFSERS----------GEGVYLM 234
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
+Y+ + K L +WD +ILDEGH IKN + Q S+ ++ + +
Sbjct: 235 SYERFKAREKGL---------------VWDILILDEGHKIKNRNAQITLSVKKVRARSKF 279
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
++SGTPIQNNL ELW++F+F P LLG + F E++E I RG + A + + +
Sbjct: 280 VLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFHEEFEEVIRRGGYRSASNLQVERAYKHS 339
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
LR I+PY LRR K+++ H+ L K + IV+ LT Q +LY L S+ V
Sbjct: 340 LMLRSLIEPYILRRTKSQISHK--------LPSKEDKIVFCTLTPVQVELYNRVLESKHV 391
Query: 588 LSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ G L+ +++L+K+C+HP L + D N ++ AE
Sbjct: 392 MKVLTGKANLLSGISMLRKVCNHPRLFFPGKVDGPEDCSSETCNEKNDGKAE-------- 443
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
++ + + + + SCKI ++ LL K EG VL+FSQT +ML++I+ I + Y +L
Sbjct: 444 ISLEGEERYGLVSSSCKIKILMDLLKKWKEEGSKVLVFSQTIRMLDIIEMCI--RKYTYL 501
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
R+DG T S R +V+ F + IFLLT++VGGLGL L A R+++ DP WNPSTD Q
Sbjct: 502 RMDGRTATSVRSSLVDRFNRDEDVFIFLLTTKVGGLGLNLIGASRIVIYDPDWNPSTDTQ 561
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRE 825
+ +RA+R GQ+KDV +YR + T+EEK+Y+KQIFK L K + R+F++ + E
Sbjct: 562 AKERAWRYGQRKDVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLSNPRLNRFFNKSCINE 621
Query: 826 LLSLP-KQGFDVSLTQQQLHEEH 847
L S G D + ++HE H
Sbjct: 622 LFSFTMTSGAD----EVRMHESH 640
>gi|302652597|ref|XP_003018145.1| hypothetical protein TRV_07841 [Trichophyton verrucosum HKI 0517]
gi|291181757|gb|EFE37500.1| hypothetical protein TRV_07841 [Trichophyton verrucosum HKI 0517]
Length = 1240
Score = 342 bits (876), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 223/645 (34%), Positives = 332/645 (51%), Gaps = 94/645 (14%)
Query: 234 DDEDDCVIVSG--KLVVNRPDRRD-GKLNKSAHSGLVNVL--DDYSDDSVLEDEGSITLS 288
DD D+ V S V R + RD KL SG NV D+ + D LE+E +
Sbjct: 330 DDGDERVYQSRLRDWVHRRSEARDRAKLEALRLSGDDNVKPEDEQTSDQHLEEEWHLPHP 389
Query: 289 GPRST-----YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL 343
T Y LPG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FL
Sbjct: 390 TTPDTVLDGGYQLPGDIYPYLFDYQKTGVKWLWELYQQQVGGIIGDEMGLGKTIQVIAFL 449
Query: 344 AGLFHSRLIKRAL-VVAPKTLLSHWIKE-------------------LTAVGLSAKIREY 383
AG+ +S+ +K + VV P T++ W+ E + + ++ +
Sbjct: 450 AGIHYSKKLKGPIIVVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDR 509
Query: 384 FGTCV------------KTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGD 431
+ + V K + L+ VL+D VL+TTY ++ S L
Sbjct: 510 YTSGVWGDRNSTSQRGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVD-------- 561
Query: 432 DDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPE 491
W +LDEGH I+NP T E+ ++HR+I+SGTP+QNNL ELW+LF+F P
Sbjct: 562 ----WGIAVLDEGHKIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPM 617
Query: 492 LLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDD 551
LG F+ ++E PI G +A + + + + A+ L++ I PY L+R K +V
Sbjct: 618 RLGTLVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDV----- 672
Query: 552 VTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHP 609
+A L KK+E +++ +LT QR YEAFL S + S G L + +L+KIC+HP
Sbjct: 673 ---AADLPKKSEQVLFCKLTKVQRAAYEAFLASGEMSSILRGRREALYGIDMLRKICNHP 729
Query: 610 LLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSL 669
L + ++ K D+ S K+ + SL
Sbjct: 730 DLTQHKI-----------------------------LSTKTDYNYGSGAKSGKMQVVKSL 760
Query: 670 LDKLIPEGHNVLIFSQTRKMLNLIQESI-GSKGYKFLRIDGTTKASDRVKIVNDFQEGDV 728
L+ GH L+F+Q R ML++++ I G G+ + R+DG T R +V++F
Sbjct: 761 LELWKDTGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKVRQSMVDEFNNDPD 820
Query: 729 APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCG 788
+FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT G
Sbjct: 821 LHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAG 880
Query: 789 TVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
T+EEKIY +QIFK L +Q + F D+++L +L G
Sbjct: 881 TIEEKIYHRQIFKQFLTNKILRDPKQRQTFQMSDIQDLFTLGNDG 925
>gi|358379983|gb|EHK17662.1| hypothetical protein TRIVIDRAFT_160093 [Trichoderma virens Gv29-8]
Length = 1133
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 201/564 (35%), Positives = 305/564 (54%), Gaps = 78/564 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
LPG + LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q+ F+A L +S+ +K+
Sbjct: 365 LPGDVYPSLFGYQKTGVQWLAELYKQNVGGIIGDEMGLGKTVQLIAFIAALHYSKKLKKP 424
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIR--------------------EYFGTCV----KT 390
+VVAP TLL W+ E ++ E+F K
Sbjct: 425 VIVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPAAEDDYDVEHFSPMATKSEKA 484
Query: 391 RQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNP 450
+ ++ V+Q VL+TTY ++ + L G WDY +LDEGH I+NP
Sbjct: 485 ARKIVRGVVQKGHVLVTTYTGLQTYADLLLGVE------------WDYAVLDEGHKIRNP 532
Query: 451 STQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRG 510
+ + + E+ + +R+I+SGTPIQNNL ELW+LF+F P LG FK+++E+PI +G
Sbjct: 533 NAEITVTCKELNTPNRLILSGTPIQNNLTELWSLFDFIYPMRLGTLVNFKQQFEIPIRQG 592
Query: 511 NDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRL 570
+A + + A+ L+E I Y L+RLK +V +A L +K E +++ +L
Sbjct: 593 GYANASNLQVMTAEKCAEALKETISEYLLQRLKVDV--------AADLPEKTEQVLFCKL 644
Query: 571 TSCQRQLYEAFLNSEIVLSAFDGS--PLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
T QR+ YE FL S+ V + + + L + IL+KIC+HP LL K
Sbjct: 645 TEGQRKAYETFLRSDEVSAILNRTRQSLYGIDILRKICNHPDLLDK-------------- 690
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK-LIPEGHNVLIFSQTR 687
+A K ++ + +S K+ LL K +IP GH L+FSQ +
Sbjct: 691 ----------------SLAYKPGYEVGNPKMSAKLQLTKDLLQKVMIPNGHKTLLFSQGK 734
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
+MLN+I++ I + G +LR+DG T R +++ F +FL+T++ GGLG LT
Sbjct: 735 QMLNIIEKCIRNCGITYLRMDGETPIDQRQPMIDKFNSDPDIHVFLMTTRTGGLGTNLTG 794
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
ADR+I+ DP WNPSTD Q+ +RA+R+GQ K V +YRLMT GT+EEKIY +QIFK +
Sbjct: 795 ADRIIIFDPDWNPSTDLQARERAWRLGQNKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNK 854
Query: 808 ATEHKEQIRYFSQQDLRELLSLPK 831
+ +Q + DL +L + K
Sbjct: 855 VLKDPKQRSSYDLSDLYDLFTFDK 878
>gi|296813433|ref|XP_002847054.1| DNA repair and recombination protein RAD26 [Arthroderma otae CBS
113480]
gi|238842310|gb|EEQ31972.1| DNA repair and recombination protein RAD26 [Arthroderma otae CBS
113480]
Length = 1233
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/575 (35%), Positives = 304/575 (52%), Gaps = 84/575 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y LPG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAGL +S+ +K
Sbjct: 385 YQLPGDIYPYLFDYQKTGVKWLWELYQQQVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLK 444
Query: 354 RAL-VVAPKTLLSHWIKEL--------------TAVGL-------SAKIREYFGTCV--- 388
+ VV P T++ W+ E + +G+ A+ R G
Sbjct: 445 GPIIVVCPPTVMKQWVNEFHDWWPPFRVSILHTSGIGMVNLKSESQAEDRYTSGAWGDRN 504
Query: 389 -------KTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMIL 441
K + L+ VL+D VL+TTY ++ S L W +L
Sbjct: 505 STSQRGGKAARRILKRVLEDGHVLVTTYAGLQTYSSLL------------IPVDWGIAVL 552
Query: 442 DEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKE 501
DEGH I+NP T E+ ++HR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 553 DEGHKIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRN 612
Query: 502 KYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKK 561
++E PI G +A + + + + A+ L++ I PY L+R K +V +A L KK
Sbjct: 613 QFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDV--------AADLPKK 664
Query: 562 NEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAED 619
+E +++ +LT QR YEAFL S + S G L + +L+KIC+HP L +
Sbjct: 665 SEQVLFCKLTKVQRAAYEAFLASGEMSSILRGRREALYGIDMLRKICNHPDLTQHKT--- 721
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
++ K D+ S K+ + SLL+ GH
Sbjct: 722 --------------------------LSLKTDYNYGSGAKSGKMQVVKSLLELWRDTGHK 755
Query: 680 VLIFSQTRKMLNLIQESI-GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
L+F+Q R ML++++ I G + + R+DG T R +V++F +FLLT++V
Sbjct: 756 TLLFAQHRIMLDILERFIRGFDRFNYRRMDGNTPIKVRQTMVDEFNNDPSLHVFLLTTKV 815
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +Q
Sbjct: 816 GGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQ 875
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
IFK L +Q + F D+++L +L G
Sbjct: 876 IFKQFLTNKILRDPKQRQTFQMSDMQDLFTLGNDG 910
>gi|407927052|gb|EKG19957.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 1254
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/561 (36%), Positives = 302/561 (53%), Gaps = 65/561 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLI 352
+ +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q F+AGL +S +L
Sbjct: 427 FKVPGDIYPNLFDYQKTGVQWLWELYSQQVGGIIGDEMGLGKTVQAISFVAGLHYSGKLT 486
Query: 353 KRALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
K +VV P T++ W+ E L I G+ + + E Q ++ + T++
Sbjct: 487 KPVIVVCPATVMKQWVTEFHTWWPALRVSILHSSGSGMMDVKRESQI---ERDIESRTFN 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAI-------------------WDYMILDEGHLIKNPS 451
+ SKS R + I D D + W+Y ILDEGH I+NP
Sbjct: 544 NRKRLSKSERAAKKIVDRVRTDGHVLVTTYSGLASYGEFLIPTEWEYAILDEGHKIRNPD 603
Query: 452 TQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGN 511
++ E+ +A+R+I+SGTP+QNNL ELW+LF+F P LG F+ ++E PI G
Sbjct: 604 SRVTIYCKELRTANRLILSGTPMQNNLVELWSLFDFIYPMRLGTLPEFRNQFENPIRFGG 663
Query: 512 DKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLT 571
+A + + A+ L+E I PY L+R K +V +A L KK E +++ RLT
Sbjct: 664 YANASNLQVETAMQCAEILKETISPYLLQRFKVDV--------AADLPKKTERVLFCRLT 715
Query: 572 SCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLN 629
QRQ YE FL S + S +G L + IL+K+C+HP L+ ++A
Sbjct: 716 VTQRQAYEDFLKSPEMNSILEGKRQALFGIDILRKVCNHPDLIHHKSAR----------- 764
Query: 630 PEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKM 689
K D + + S K+ + L+ +GH L+F+Q R M
Sbjct: 765 ------------------HKSDPKYGSGSKSGKMQVVKELVQMWKKKGHKTLLFAQHRIM 806
Query: 690 LNLIQESIGSKG-YKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKA 748
L++++ + +LR+DG+T DR +V+ F +FLLT++VGGLG+ LT A
Sbjct: 807 LDILERFVKKAADINYLRMDGSTNIKDRQDLVDRFNNDSNMHVFLLTTKVGGLGVNLTGA 866
Query: 749 DRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA 808
DRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +QIFK L
Sbjct: 867 DRVIIYDPDWNPSTDVQARERAWRLGQKREVEIYRLMTAGTIEEKIYHRQIFKQFLTNKI 926
Query: 809 TEHKEQIRYFSQQDLRELLSL 829
+Q + F +DL +L +L
Sbjct: 927 LRDPKQRQTFQLKDLHDLFTL 947
>gi|320034068|gb|EFW16014.1| DNA repair and recombination protein RAD26 [Coccidioides posadasii
str. Silveira]
Length = 1198
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 215/628 (34%), Positives = 327/628 (52%), Gaps = 95/628 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 385 YRIPGDIYPYLFDYQKTGVQWLWELYQQRVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLD 444
Query: 353 KRALVVAPKTLLSHWIKE------------LTAVG---------------LSAKIREYFG 385
+VV P T++ W+ E L G L+++I + +
Sbjct: 445 APIIVVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMINIKKESRAEDTLTSEIWDPYR 504
Query: 386 TC-----VKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
K + L+ VL+D VL+TTY ++ + L W I
Sbjct: 505 PTRMSGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIPVD------------WGCAI 552
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP T E+ + HR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 553 LDEGHKIRNPDTAITIHCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 612
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
++E PI G +A + + + + A+ L++ I PY L+R K +V +A L K
Sbjct: 613 NQFEFPIRAGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPK 664
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAE 618
K E +++ +LT QR YEAFL+S + + G L + IL+KIC+HP L
Sbjct: 665 KTEQVLFCKLTKLQRAAYEAFLSSNEMSAIMRGRRDVLFGVDILRKICNHPDL------- 717
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
PE L++K + + A+ S K+ + +LL+ GH
Sbjct: 718 -----------PEHKTLSQKANYNYGNSAK-----------SGKMQVVKALLELWRDTGH 755
Query: 679 NVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+F+Q R ML+++++ I S G+ + R+DG T R +V++F +FLLT++
Sbjct: 756 KTLLFAQHRIMLDILEKFIKSLTGFNYRRMDGNTPIKVRQGMVDEFNNDPDIHVFLLTTK 815
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +
Sbjct: 816 VGGLGVNLTGADRVIIYDPDWNPSTDLQARERAWRLGQKREVTIYRLMTAGTIEEKIYHR 875
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG----------FDVSLTQQQLHEEH 847
QIFK L + +Q + F DL +L +L G DV+ + HE+
Sbjct: 876 QIFKQFLTNKILKDPKQRQTFQMSDLHDLFTLGDNGPTETSKMFQEADVTFQENSKHEKD 935
Query: 848 GDQHNMDESLEAHIQFLDTLGIAGVSHH 875
+ ++E + + G+A + +
Sbjct: 936 TKESKVEEERKEKDKISKVTGVAALEQY 963
>gi|46111317|ref|XP_382716.1| hypothetical protein FG02540.1 [Gibberella zeae PH-1]
Length = 1163
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 204/552 (36%), Positives = 305/552 (55%), Gaps = 58/552 (10%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
LPG I LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q+ F+A L +S+ ++R
Sbjct: 390 LPGDIHPSLFGYQKTGVQWLAELYKQNVGGIIGDEMGLGKTVQLIAFIAALHYSKKLRRP 449
Query: 355 ALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD-- 410
+VVAP TLL W+ E L I G+ + ++E +Y L L T
Sbjct: 450 VIVVAPATLLRQWVSEFHRWWPPLRVSILHASGSGMMNPKFEDEYDLDHYKPLATKSQKA 509
Query: 411 ---IVRNNSKSLRGSSFISDEAGDD---DAI----WDYMILDEGHLIKNPSTQRAKSLLE 460
IV +KS G ++ G D + WDY +LDEGH I+NP+ + + E
Sbjct: 510 ASRIVNGVAKS--GHVLVTTYTGLQTYADTLLPVEWDYAVLDEGHKIRNPNAEITVTCKE 567
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ + +R+I+SGTP+QNNL ELW+LF+F P LG F+ ++E+PI +G +A + +
Sbjct: 568 LNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRAQFEIPIRQGGYANASNLQV 627
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
A+ L+E I Y L+RLK +V +A L +K E +++ +LT Q + YE
Sbjct: 628 MTAEKCAEALKETIGEYLLQRLKVDV--------AADLPEKTEQVLFCKLTEGQHKAYET 679
Query: 581 FLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
F+ S+ V + + L + IL+KIC+HP LL D +L +K
Sbjct: 680 FIKSDEVSAILNRRRQSLYGIDILRKICNHPDLL-------------------DKSLGKK 720
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDK-LIPEGHNVLIFSQTRKMLNLIQESI 697
DF + +S K+ LL K +IP GH L+FSQ ++ML++I++ I
Sbjct: 721 AGY---------DFG--NPKLSAKLQLTKDLLQKVMIPNGHKTLLFSQGKQMLDIIEKCI 769
Query: 698 GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPA 757
G G ++R+DG T R +++ F E +FL+T++ GGLG LT ADR+I+ DP
Sbjct: 770 GECGISYVRMDGETPVDRRQTMIDKFNESPDIHVFLMTTRTGGLGTNLTGADRIIIFDPD 829
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRY 817
WNPSTD Q+ +RA+R+GQKK V +YRLMT GT+EEKIY +QIFK + + +Q
Sbjct: 830 WNPSTDLQARERAWRLGQKKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRSS 889
Query: 818 FSQQDLRELLSL 829
+ DL +L S
Sbjct: 890 YDLSDLYDLFSF 901
>gi|302509748|ref|XP_003016834.1| hypothetical protein ARB_05127 [Arthroderma benhamiae CBS 112371]
gi|291180404|gb|EFE36189.1| hypothetical protein ARB_05127 [Arthroderma benhamiae CBS 112371]
Length = 1220
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 207/603 (34%), Positives = 315/603 (52%), Gaps = 89/603 (14%)
Query: 271 DDYSDDSVLEDEGSITLSGPRST-----YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGG 325
D+ + D LE+E + T Y LPG + LF +Q+ G++WLW L+ Q GG
Sbjct: 352 DEQTSDQRLEEEWHLPHPTTPDTELDGGYRLPGDVYPYLFDYQKTGVKWLWELYQQQVGG 411
Query: 326 ILGDDMGLGKTMQICGFLAGLFHSRLIKRAL-VVAPKTLLSHWIKE-------------- 370
I+GD+MGLGKT+Q+ FLAG+ +S+ +K + VV P T++ W+ E
Sbjct: 412 IIGDEMGLGKTIQVIAFLAGIHYSKKLKGPIIVVCPPTVMKQWVNEFHRWWPPFRVSILH 471
Query: 371 -----LTAVGLSAKIREYFGTCV------------KTRQYELQYVLQDKGVLLTTYDIVR 413
+ + ++ + + + V K + L+ VL+D VL+TTY ++
Sbjct: 472 TSGSGMVNIKSESQAEDRYTSGVWGDRNSTTQRGNKAARRILKRVLEDGHVLVTTYAGLQ 531
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
S L W +LDEGH I+NP T E+ ++HR+I+SGTP
Sbjct: 532 TYSSLL------------IPVDWGIAVLDEGHKIRNPDTSITIHCKELRTSHRLILSGTP 579
Query: 474 IQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRER 533
+QNNL ELW+LF+F P LG F+ ++E PI G +A + + + + A+ L++
Sbjct: 580 MQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDA 639
Query: 534 IQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG 593
I PY L+R K +V +A L KK+E +++ +LT QR YEAFL S + S G
Sbjct: 640 ISPYLLQRFKMDV--------AADLPKKSEQVLFCKLTKVQRAAYEAFLASGEMSSILRG 691
Query: 594 --SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
L + +L+KIC+HP L + ++ K D
Sbjct: 692 RREALYGIDMLRKICNHPDLTQHKI-----------------------------LSTKTD 722
Query: 652 FQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESI-GSKGYKFLRIDGT 710
+ S K+ + SLL+ GH L+F+Q R ML++++ I G G+ + R+DG
Sbjct: 723 YNYGSGAKSGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDGN 782
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T R +V++F +FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA
Sbjct: 783 TPIKVRQSMVDEFNNNPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERA 842
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLP 830
+R+GQK++V +YRLMT GT+EEKIY +QIFK L +Q + F D+++L +L
Sbjct: 843 WRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQMSDIQDLFTLG 902
Query: 831 KQG 833
G
Sbjct: 903 NDG 905
>gi|408391786|gb|EKJ71154.1| hypothetical protein FPSE_08660 [Fusarium pseudograminearum CS3096]
Length = 1163
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 204/552 (36%), Positives = 305/552 (55%), Gaps = 58/552 (10%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
LPG I LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q+ F+A L +S+ ++R
Sbjct: 390 LPGDIHPSLFGYQKTGVQWLAELYKQNVGGIIGDEMGLGKTVQLIAFIAALHYSKKLRRP 449
Query: 355 ALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD-- 410
+VVAP TLL W+ E L I G+ + ++E +Y L L T
Sbjct: 450 VIVVAPATLLRQWVSEFHRWWPPLRVSILHASGSGMMNPKFEDEYDLDHYKPLATKSQNA 509
Query: 411 ---IVRNNSKSLRGSSFISDEAG----DDDAI---WDYMILDEGHLIKNPSTQRAKSLLE 460
IV +KS G ++ G D + WDY +LDEGH I+NP+ + + E
Sbjct: 510 ASRIVNGVAKS--GHVLVTTYTGLQTYADTLLPVEWDYAVLDEGHKIRNPNAEITVTCKE 567
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ + +R+I+SGTP+QNNL ELW+LF+F P LG F+ ++E+PI +G +A + +
Sbjct: 568 LNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRAQFEIPIRQGGYANASNLQV 627
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
A+ L+E I Y L+RLK +V +A L +K E +++ +LT Q + YE
Sbjct: 628 MTAEKCAEALKETIGEYLLQRLKVDV--------AADLPEKTEQVLFCKLTEGQHKAYET 679
Query: 581 FLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
F+ S+ V + + L + IL+KIC+HP LL D +L +K
Sbjct: 680 FIKSDEVSAILNRRRQSLYGIDILRKICNHPDLL-------------------DKSLGKK 720
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDK-LIPEGHNVLIFSQTRKMLNLIQESI 697
DF + +S K+ LL K +IP GH L+FSQ ++ML++I++ I
Sbjct: 721 AGY---------DFG--NPKLSAKLQLTKDLLQKVMIPNGHKTLLFSQGKQMLDIIEKCI 769
Query: 698 GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPA 757
G G ++R+DG T R +++ F E +FL+T++ GGLG LT ADR+I+ DP
Sbjct: 770 GECGISYVRMDGETPVDRRQTMIDKFNESPDIHVFLMTTRTGGLGTNLTGADRIIIFDPD 829
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRY 817
WNPSTD Q+ +RA+R+GQKK V +YRLMT GT+EEKIY +QIFK + + +Q
Sbjct: 830 WNPSTDLQARERAWRLGQKKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRSS 889
Query: 818 FSQQDLRELLSL 829
+ DL +L S
Sbjct: 890 YDLSDLYDLFSF 901
>gi|342884633|gb|EGU84838.1| hypothetical protein FOXB_04619 [Fusarium oxysporum Fo5176]
Length = 1160
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 205/576 (35%), Positives = 310/576 (53%), Gaps = 79/576 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
LPG I LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q+ F+A L +S+ ++R
Sbjct: 389 LPGDIHPSLFGYQKTGVQWLAELYKQNVGGIIGDEMGLGKTVQLIAFIAALHYSKKLRRP 448
Query: 355 ALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQY--------------- 397
+VVAP TLL W+ E L I G+ + ++E +Y
Sbjct: 449 VIVVAPATLLRQWVSEFHRWWPPLRVSILHASGSGMMNPKFEDEYDLDHFQPLATKSEKA 508
Query: 398 -------VLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNP 450
V++ VL+TTY ++ +++L WDY +LDEGH I+NP
Sbjct: 509 AQRIVNGVVKSGHVLVTTYTGLQTYAETLLPVE------------WDYAVLDEGHKIRNP 556
Query: 451 STQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRG 510
+ + + E+ + +R+I+SGTP+QNNL ELW+LF+F P LG F+ ++E+PI +G
Sbjct: 557 NAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRAQFEIPIRQG 616
Query: 511 NDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRL 570
+A + + A+ L+E I Y L+RLK +V +A L +K E +++ +L
Sbjct: 617 GYANASNLQVMTAEKCAEALKETIGEYLLQRLKVDV--------AADLPEKTEQVLFCKL 668
Query: 571 TSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
T Q + YE F+ S+ V + + L + IL+KIC+HP LL K + G D
Sbjct: 669 TDGQHKAYETFIKSDEVSAILNRRRQSLYGIDILRKICNHPDLLDKTLGKKA--GYD-FG 725
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK-LIPEGHNVLIFSQTR 687
NP+ +S K+ LL K +IP GH L+FSQ +
Sbjct: 726 NPK---------------------------LSAKLQLTKDLLQKVMIPNGHKTLLFSQGK 758
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
+MLN+I++ I G ++R+DG T R +++ F E +FL+T++ GGLG LT
Sbjct: 759 QMLNIIEKCISECGISYVRMDGETPVDQRQPMIDRFNESPDIHVFLMTTRTGGLGTNLTG 818
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
ADR+I+ DP WNPSTD Q+ +RA+R+GQKK V +YRLMT GT+EEKIY +QIFK +
Sbjct: 819 ADRIIIFDPDWNPSTDLQARERAWRLGQKKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNK 878
Query: 808 ATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQL 843
+ +Q + DL +L S G D S + +L
Sbjct: 879 VLKDPKQRSSYDLSDLYDLFSY-NTGEDASANRSEL 913
>gi|213408929|ref|XP_002175235.1| SNF2 family helicase Rhp26 [Schizosaccharomyces japonicus yFS275]
gi|212003282|gb|EEB08942.1| SNF2 family helicase Rhp26 [Schizosaccharomyces japonicus yFS275]
Length = 983
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 215/578 (37%), Positives = 312/578 (53%), Gaps = 84/578 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI- 352
+ +PG I LF +Q + WLW L+CQG GGI+GD+MGLGKT+QI +LA L +SR
Sbjct: 262 FSIPGDIRPKLFRYQVTCILWLWELYCQGAGGIIGDEMGLGKTVQIVAYLASLHYSRKFD 321
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGLSAKI--REY--FGTCVKTRQYE 394
K LVV P TL+ W+ E T GL++K R+Y + + + E
Sbjct: 322 KPTLVVCPATLMKQWVGEFHRWWAPFRVVILHSTGSGLNSKREGRDYKDSASEGEDEEEE 381
Query: 395 LQYVLQDKGVLLTTYDIVRNNSKSL-------------RGSSFISDEAG---DDDAI--- 435
+D+ V + +R +S S RG I+ AG D +
Sbjct: 382 SVLEAEDERV-----NPLRRSSASFHKFAEKLIDSTFERGHILITTYAGLRIYSDLLLPR 436
Query: 436 -WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLG 494
W Y ILDEGH I+NP + + ++ + +RII+SGTPIQNNL ELW LF+F P LG
Sbjct: 437 EWGYCILDEGHKIRNPDAEISILSKQLRTVNRIILSGTPIQNNLTELWNLFDFIFPGRLG 496
Query: 495 DNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTS 554
F+ ++ LPI G +A + + + A LR+ I PY LRR+K +V
Sbjct: 497 TLPVFQNQFALPINIGGYANATNIQVQTSYKCACMLRDLISPYLLRRMKLDV-------- 548
Query: 555 SATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL 612
+A L KK+E +++ +LT QR Y+ FLNS + +G L + +L+KIC+HP L+
Sbjct: 549 AADLPKKSEQVLFCKLTPEQRIAYQQFLNSGDMNKILNGKRQVLFGVDVLRKICNHPDLV 608
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
+ E K+ ++ S K+ + +LL
Sbjct: 609 MREFLE-----------------------------HKEGYEYGDPKKSGKLKVVQALLKL 639
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKG-YKFLRIDGTTKASDRVKIVNDFQEGDVAPI 731
+ H L+FSQTR+ML++++++IGS G + R+DGTT R +V++F + +
Sbjct: 640 WKSQNHRTLLFSQTRQMLDILEKAIGSMGDISYCRMDGTTSIGLRQGLVDEFNKTSRYDV 699
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+DVVVYRLM+ GT+E
Sbjct: 700 FLLTTRVGGLGINLTGADRVIIFDPDWNPSTDAQARERAWRLGQKRDVVVYRLMSSGTIE 759
Query: 792 EKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
EKIY +QIFK L + Q R+F DL +L +L
Sbjct: 760 EKIYHRQIFKQFLTNKILKDPNQRRFFKMNDLHDLFTL 797
>gi|340518576|gb|EGR48817.1| predicted protein [Trichoderma reesei QM6a]
Length = 1153
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 200/562 (35%), Positives = 303/562 (53%), Gaps = 78/562 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
LPG + LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q+ F+A L +S+ +K+
Sbjct: 388 LPGDVYPSLFGYQKTGVQWLAELYKQSVGGIIGDEMGLGKTVQLIAFIAALHYSKKLKKP 447
Query: 355 ALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQY--------------- 397
+VVAP TLL W+ E L I G+ + E +Y
Sbjct: 448 VIVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPSAEDEYDLEHFSPMATRSNKA 507
Query: 398 -------VLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNP 450
V+Q VL+TTY ++ ++ L + WDY +LDEGH I+NP
Sbjct: 508 AKRIVRGVVQKGHVLITTYTGLQTYAEELL------------NVEWDYAVLDEGHKIRNP 555
Query: 451 STQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRG 510
+ + + E+ + +R+I+SGTPIQNNL ELW+LF+F P LG FK+++E+PI +G
Sbjct: 556 NAEITVTCKELNTPNRLILSGTPIQNNLTELWSLFDFIYPMRLGTLVNFKQQFEIPIRQG 615
Query: 511 NDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRL 570
+A + + A+ L+E I Y L+RLK +V +A L +K E +++ +L
Sbjct: 616 GYANASNLQVMTAEKCAEALKETISEYLLQRLKVDV--------AADLPEKTEQVLFCKL 667
Query: 571 TSCQRQLYEAFLNSEIVLSAFDGS--PLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
T QR Y+ FL S+ V + + + L + IL+KIC+HP LL
Sbjct: 668 TEGQRNAYQTFLRSDEVSAILNKTRQSLYGIDILRKICNHPDLL---------------- 711
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK-LIPEGHNVLIFSQTR 687
D +L++K D +S K+ LL K +IP GH L+FSQ +
Sbjct: 712 ---DKSLSQKAGYEFGD-----------PKMSAKLQLTKDLLQKVMIPNGHKTLLFSQGK 757
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
+MLN+I++ I + G +LR+DG T R +++ F +F++T++ GGLG LT
Sbjct: 758 QMLNIIEKCIRNCGITYLRMDGETPIDQRQPMIDKFNSDPDIHVFIMTTRTGGLGTNLTG 817
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
ADR+I+ DP WNPSTD Q+ +RA+R+GQ K V +YRLMT GT+EEKIY +QIFK +
Sbjct: 818 ADRIIIFDPDWNPSTDLQARERAWRLGQNKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNK 877
Query: 808 ATEHKEQIRYFSQQDLRELLSL 829
+ +Q + DL +L +
Sbjct: 878 VLKDPKQRSSYDLSDLYDLFTF 899
>gi|348665749|gb|EGZ05578.1| hypothetical protein PHYSODRAFT_533639 [Phytophthora sojae]
Length = 1086
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 211/582 (36%), Positives = 313/582 (53%), Gaps = 56/582 (9%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S ++P + L PHQRE L WL LH +G GGILGDDMGLGKT+Q+ FL L +R
Sbjct: 223 SGLLVPSYVLTQLLPHQRECLEWLHKLHERGVGGILGDDMGLGKTVQLASFLGSLHRARR 282
Query: 352 IKRALVVAPKTLLSHWIKEL--TAVGLSAKIREYFGTCVKTR----QYEL----QYVLQD 401
++ L++ P ++L W++EL + + GT V T YE + +D
Sbjct: 283 LRTVLLLCPASVLLQWVRELHKWVPWMRVVLLHASGTGVSTSFSSDSYEQLIDEVFRFED 342
Query: 402 K-----------------------GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDY 438
+ GV+++TY+ VR S F++ E WDY
Sbjct: 343 EMSGDEADGGDEFSGMGGHAPTGGGVVISTYENVRQYQ-----SLFLTRE-------WDY 390
Query: 439 MILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKW 498
++LDEGH I+NP + + ++ + HRII+SGTPIQN L+ELW+LF+F P LG
Sbjct: 391 VVLDEGHRIRNPDAETTLACKQLRTVHRIILSGTPIQNRLRELWSLFDFVYPGRLGTLPT 450
Query: 499 FKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTS-SAT 557
F +++ LPI G A + + A L++ IQP+ LRR K EV A
Sbjct: 451 FDDEFVLPIRAGGYATATKMQVLMAYKCALALKDLIQPFLLRRTKQEVLTNGASGKMGAL 510
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF--DGSPLAALTILKKICDHPLLLTKR 615
L K E I++ RLT QR LY+ FL S V S D P A+++L+ IC+HP LL
Sbjct: 511 LPGKQEQILFCRLTKRQRALYKRFLASPEVASVLRRDIRPFRAISVLRHICNHPDLLASF 570
Query: 616 AAEDVLDGMDSMLNPEDAALAEKLAMH-IADVAEKDDFQEQHD------NISCKISFILS 668
+ D + ++ E+ + +A + ++ D + + D + S K+ +
Sbjct: 571 GDGRLADKRRQKYDDDEDNEEEQEGLTDLAGMLDEVDDEGESDEPFGAASASGKMIVLQK 630
Query: 669 LLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDV 728
+L +GH VLIF+QTR ML++++ + +G+ R+DGTT ++R + ++ F D
Sbjct: 631 ILGLWKEQGHRVLIFTQTRSMLDILESFMSRQGHACCRLDGTTGVAERQQRLDAFNAPDS 690
Query: 729 API-FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
FLLT++ GG+G+ L ADRV+V DP WNPSTD Q+ +RA+RIGQ+K V VYRL+T
Sbjct: 691 ELFAFLLTTRAGGIGVNLVGADRVVVFDPDWNPSTDVQARERAWRIGQQKQVTVYRLVTA 750
Query: 788 GTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
GT+EEKIY +QIFK L ++ R F++ LR+L L
Sbjct: 751 GTIEEKIYHRQIFKQYLTSKVLHDAKRKRCFNKHTLRDLFVL 792
>gi|443731184|gb|ELU16421.1| hypothetical protein CAPTEDRAFT_138667 [Capitella teleta]
Length = 558
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 200/517 (38%), Positives = 295/517 (57%), Gaps = 51/517 (9%)
Query: 270 LDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGD 329
L +Y DDS D S+ G + + L ++ L+ HQREG+ W+W L + KGGILGD
Sbjct: 62 LAEYGDDSDEADGDSMVHMG--NGFYLFQELYKQLYAHQREGVTWMWWLFQKRKGGILGD 119
Query: 330 DMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVK 389
DMGLGKT+Q+ FL+G+F S IK L++ P ++++W E + +
Sbjct: 120 DMGLGKTIQVIAFLSGMFDSEKIKSVLIILPVAVITNWENEFQKWAPGISTEHFHSGSKR 179
Query: 390 TRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
R L V + GV +T+Y ++ NN+ L E + IWDY+ILDEGH IKN
Sbjct: 180 DRDRALMKVQRRGGVCMTSYGMMVNNADQLA-------EQNGREFIWDYVILDEGHKIKN 232
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPE-LLGDNKWFKEKYELPIL 508
PS + +K + +P+ +R++++GTP+QNNLKE+WALF++ LLG ++ FK +YE+PI
Sbjct: 233 PSNKCSKGIHSVPARNRLLLTGTPVQNNLKEMWALFDWTHQGFLLGTSRTFKMEYEMPIT 292
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDD----------------- 551
R +K A E+ +G +A+ L++ I PYFLRR K EV +
Sbjct: 293 RAREKDASGNEQILGEQMAQSLQKIISPYFLRRTKAEVKISEARRKEKEEKKEDEEGKDE 352
Query: 552 ---VTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKIC 606
S T++ KN+ IVW+ L+ Q+++Y FL S+ V + SPL +LTILKKIC
Sbjct: 353 KGIAPSMPTMTHKNDFIVWVYLSEIQQKIYHDFLESDEVKELLNSKRSPLVSLTILKKIC 412
Query: 607 DHPLLLTKRAA-------EDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNI 659
DHP LLT R +D LD MD + AA MHI + E
Sbjct: 413 DHPRLLTNRQCLQLGITDDDSLDTMDEETGNQIAA---NRVMHIDN--------ELLVRE 461
Query: 660 SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK-ASDRVK 718
S K+ F++ LLD L EGH L+FSQ+RK+L++IQ+ + +G++ R+DGT + +R +
Sbjct: 462 SGKMVFLIELLDNLKAEGHRALVFSQSRKVLDIIQKVMTDRGHRVARLDGTVRHLMERDE 521
Query: 719 IVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVD 755
I+ F++ IFLLT+QVGG+GLTLT ADRV++ +
Sbjct: 522 IIQRFKDNRSYSIFLLTTQVGGVGLTLTAADRVVICE 558
>gi|380029956|ref|XP_003698629.1| PREDICTED: DNA excision repair protein ERCC-6-like [Apis florea]
Length = 987
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 206/575 (35%), Positives = 310/575 (53%), Gaps = 61/575 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L+ +Q+ ++WLW LH + GG+LGD+MGLGKT+Q+ FLAGL S L+
Sbjct: 168 FKVPQSIWKKLYKYQKISVQWLWELHLRSLGGLLGDEMGLGKTVQVIAFLAGLDCSELLS 227
Query: 354 ---------RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQYELQYVLQDK 402
+V+ P TL+ W+K L + GT +Y + L+
Sbjct: 228 DGGRFRGLGPTIVICPATLMEQWVKHFHEWWPLLRIVVLHQSGTYNGNLEYLID-SLKSG 286
Query: 403 GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP 462
G+++T+Y S L+ + W Y+ILDEGH I+NP + +K++ E
Sbjct: 287 GIIITSY------SGMLKHKDLLVSNQ------WHYVILDEGHKIRNPQAKVSKAVKEFS 334
Query: 463 SAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRI 522
+ HR++++G+P+QN+LKELW+LF+F P LG F E PI RG +A ++
Sbjct: 335 TPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAGPITRGGYANATPLQEAT 394
Query: 523 GSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL 582
VA LR+ I PY LRR KN+V H +L +KNE +++ LT Q++LY+ +L
Sbjct: 395 ALQVAMMLRDAITPYMLRRTKNDVQHH------VSLPEKNEQVLFCSLTEEQKKLYKKYL 448
Query: 583 NS-----------EIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
S I + L AL+ L+KIC+HP L + D + E
Sbjct: 449 CSTDVSFILHEKNNIENGKYRARLLIALSALRKICNHPDLYLYTSPID---------SDE 499
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
D ++ + EK + ++ S K+ + SLL +GH VL+F+Q R+M++
Sbjct: 500 DIDISN-------ETLEKFGYWKR----SGKMIVVRSLLKIWKKQGHRVLLFTQGRQMMH 548
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+++ + S+ Y +LR+DGTT S R + + F IFLLT++VGGLG+ LT A+RV
Sbjct: 549 VLESLVQSEQYTYLRMDGTTPMSHRQETIRSFNRDSSYFIFLLTTRVGGLGVNLTGANRV 608
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH 811
++ DP WNP+TD Q+ +RA+RIGQ K+V +YRL+T GT+EEKIY +QIFK L E
Sbjct: 609 VIYDPDWNPATDAQARERAWRIGQNKNVTIYRLITAGTIEEKIYHRQIFKILLSNKVLED 668
Query: 812 KEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
Q R F DL EL + + D S QL +E
Sbjct: 669 PRQRRLFKTNDLVELFNFNESTDDHSSESDQLFQE 703
>gi|119178020|ref|XP_001240720.1| hypothetical protein CIMG_07883 [Coccidioides immitis RS]
Length = 1198
Score = 338 bits (868), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 208/576 (36%), Positives = 309/576 (53%), Gaps = 85/576 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 385 YRIPGDIYPYLFDYQKTGVQWLWELYQQRVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLD 444
Query: 353 KRALVVAPKTLLSHWIKE------------LTAVG---------------LSAKIREYFG 385
+VV P T++ W+ E L G L+++I + +
Sbjct: 445 APIIVVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMINIKKESRAEDTLTSEIWDPYR 504
Query: 386 TC-----VKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
K + L+ VL+D VL+TTY ++ + L W I
Sbjct: 505 PTRMSGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLL------------IPVDWGCAI 552
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP T E+ + HR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 553 LDEGHKIRNPDTAITIHCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 612
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
++E PI G +A + + + + A+ L++ I PY L+R K +V +A L K
Sbjct: 613 NQFEFPIRAGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPK 664
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAE 618
K E +++ +LT QR YEAFL+S + + G L + IL+KIC+HP L
Sbjct: 665 KTEQVLFCKLTKLQRAAYEAFLSSNEMSAIMRGRRDVLFGVDILRKICNHPDL------- 717
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
PE L++K + + A+ S K+ + +LL+ GH
Sbjct: 718 -----------PEHKTLSQKANYNYGNSAK-----------SGKMQVVKALLELWRDTGH 755
Query: 679 NVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+F+Q R ML+++++ I S G+ + R+DG T R +V++F +FLLT++
Sbjct: 756 KTLLFAQHRIMLDILEKFIKSLTGFNYRRMDGNTPIKVRQGMVDEFNNDPDIHVFLLTTK 815
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +
Sbjct: 816 VGGLGVNLTGADRVIIYDPDWNPSTDLQARERAWRLGQKREVTIYRLMTAGTIEEKIYHR 875
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
QIFK L + +Q + F DL +L +L G
Sbjct: 876 QIFKQFLTNKILKDPKQRQTFQMSDLHDLFTLGDNG 911
>gi|449296949|gb|EMC92968.1| hypothetical protein BAUCODRAFT_42604, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1182
Score = 338 bits (868), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 199/569 (34%), Positives = 306/569 (53%), Gaps = 84/569 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKR 354
+PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+QI FLA L +S +L K
Sbjct: 366 VPGDIYPSLFDYQKTGVQWLWELYSQQVGGIIGDEMGLGKTIQIISFLASLHYSDKLTKP 425
Query: 355 ALVVAPKTLLSHWIKEL-------------------------------TAVGLSAKIREY 383
+VV P T++ W+ E V + + +
Sbjct: 426 IIVVCPATVMKQWVNEFHRWWPPLRVSILHTSGSGMLDIKREARIEDDLEVDMYGRKKAT 485
Query: 384 FGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDE 443
K + + V++D VL+TTY ++ ++ L + W+Y +LDE
Sbjct: 486 MNKGHKAAKRIVDRVVRDGHVLVTTYSGLQTYAELLIPTD------------WEYAVLDE 533
Query: 444 GHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKY 503
GH I+NP+T E+ + +R+I+SGTP+QNNL ELW+LF+F P LG F+ ++
Sbjct: 534 GHKIRNPNTAITIYCKELRTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRSQF 593
Query: 504 ELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNE 563
E+PI +G +A + + A+ L++ I PY L+R K +V +A L KK+E
Sbjct: 594 EIPIKQGGYANASNLQVETAMKCAETLKDTISPYLLQRFKVDV--------AADLPKKSE 645
Query: 564 MIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVL 621
+++ +LT QR+ YE FL SE + S G L + IL+KIC+HP L+ +
Sbjct: 646 RVLFCKLTKLQREAYEWFLASEEMKSILSGKRQALYGVDILRKICNHPDLVEHKT----- 700
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVL 681
+++K + + S K+ + +LL+ +GH L
Sbjct: 701 ------------------------LSKKAGYNYGSGHKSGKMQVVKALLEIWKRDGHKTL 736
Query: 682 IFSQTRKMLNLIQESI-GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
+F+Q R ML++++ I G G+ + R+DG T DR +V++F + +FLLT++VGG
Sbjct: 737 LFAQHRIMLDILETFIQGMDGFNYRRMDGNTSIKDRQDLVDEFNKDQDLHVFLLTTKVGG 796
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +QIF
Sbjct: 797 LGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVEIYRLMTAGTIEEKIYHRQIF 856
Query: 801 KGGLFKTATEHKEQIRYFSQQDLRELLSL 829
K L Q + F +DL +L +L
Sbjct: 857 KQFLTNKILRDPRQRQTFQLRDLHDLFTL 885
>gi|196000388|ref|XP_002110062.1| hypothetical protein TRIADDRAFT_53632 [Trichoplax adhaerens]
gi|190588186|gb|EDV28228.1| hypothetical protein TRIADDRAFT_53632 [Trichoplax adhaerens]
Length = 1207
Score = 338 bits (867), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 202/584 (34%), Positives = 303/584 (51%), Gaps = 86/584 (14%)
Query: 259 NKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSL 318
+KS +S +N D+ D + L G S +PG I LF +Q++G+RW+W L
Sbjct: 398 SKSDYSSFINCFDNAYD---------MVLDGGLS---VPGGIWKKLFKYQQDGVRWMWEL 445
Query: 319 HCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR---------ALVVAPKTLLSHWIK 369
H Q GGI+GD+MGLGKT+Q+ FLA L +S+L +R L+V P T+L W+
Sbjct: 446 HRQDAGGIIGDEMGLGKTIQVIAFLAALKYSKLPQRHGKYTGLGPVLIVCPATVLEQWVA 505
Query: 370 ELTAVGLSAKIREYF--GTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISD 427
E +I + G+ + + ++ ++ +G+L+TTY VR L
Sbjct: 506 EFHKWWPPFRIAIFHETGSYAGSLESLVKDIVYSRGILITTYSHVRIYQTLLAQKP---- 561
Query: 428 EAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNF 487
W+Y ++ P HR+I++GTP+QNNL++LW+LF+F
Sbjct: 562 --------WEY--------VRTP--------------HRVILTGTPMQNNLRDLWSLFDF 591
Query: 488 CCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVF 547
P LG F E++ +PI G +A + + + A LR+ I PY LRR K V
Sbjct: 592 VFPGKLGTLPVFMEQFSVPITMGGYANATEVQVQTAYKCACVLRDTINPYLLRRTKAGVQ 651
Query: 548 HEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKI 605
+ L KNE +++ RLT QR +Y+ +L S+ V DG L L+KI
Sbjct: 652 KD-----CLHLPPKNEHVLFCRLTDFQRCVYQQYLKSDEVAGIIDGRNHAFGGLITLRKI 706
Query: 606 CDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISF 665
C+HP L +DS + D H +S K+
Sbjct: 707 CNHPHLTNISVPRVAKVNVDSEIIRSDG----------------------HWLLSGKMIA 744
Query: 666 ILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQE 725
+ +LL H VL+F+QTR+M N++++ + S+ Y ++R+DGTT S R +V F
Sbjct: 745 LKTLLSLWRENKHRVLLFTQTRQMANILEKFVKSENYPYMRMDGTTNISSRQSLVKLFNR 804
Query: 726 GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLM 785
+ IF+LT++VGGLGL LT ADRV++ DP WNPSTD Q+ +RA+R+GQ K+V +YR +
Sbjct: 805 NNAIFIFILTTRVGGLGLNLTGADRVVIFDPDWNPSTDMQARERAWRVGQTKEVTIYRFL 864
Query: 786 TCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
T GT+EEKIY +Q+FK L ++ +Q R+F DL EL SL
Sbjct: 865 TSGTIEEKIYHRQVFKEFLTNRILKNPKQRRFFKSNDLYELFSL 908
>gi|392867317|gb|EAS29452.2| DNA repair and recombination protein RAD26 [Coccidioides immitis
RS]
Length = 1213
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 208/576 (36%), Positives = 309/576 (53%), Gaps = 85/576 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 400 YRIPGDIYPYLFDYQKTGVQWLWELYQQRVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLD 459
Query: 353 KRALVVAPKTLLSHWIKE------------LTAVG---------------LSAKIREYFG 385
+VV P T++ W+ E L G L+++I + +
Sbjct: 460 APIIVVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMINIKKESRAEDTLTSEIWDPYR 519
Query: 386 TC-----VKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
K + L+ VL+D VL+TTY ++ + L W I
Sbjct: 520 PTRMSGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIPVD------------WGCAI 567
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP T E+ + HR+I+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 568 LDEGHKIRNPDTAITIHCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 627
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
++E PI G +A + + + + A+ L++ I PY L+R K +V +A L K
Sbjct: 628 NQFEFPIRAGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPK 679
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAE 618
K E +++ +LT QR YEAFL+S + + G L + IL+KIC+HP L
Sbjct: 680 KTEQVLFCKLTKLQRAAYEAFLSSNEMSAIMRGRRDVLFGVDILRKICNHPDL------- 732
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
PE L++K + + A+ S K+ + +LL+ GH
Sbjct: 733 -----------PEHKTLSQKANYNYGNSAK-----------SGKMQVVKALLELWRDTGH 770
Query: 679 NVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+F+Q R ML+++++ I S G+ + R+DG T R +V++F +FLLT++
Sbjct: 771 KTLLFAQHRIMLDILEKFIKSLTGFNYRRMDGNTPIKVRQGMVDEFNNDPDIHVFLLTTK 830
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +
Sbjct: 831 VGGLGVNLTGADRVIIYDPDWNPSTDLQARERAWRLGQKREVTIYRLMTAGTIEEKIYHR 890
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
QIFK L + +Q + F DL +L +L G
Sbjct: 891 QIFKQFLTNKILKDPKQRQTFQMSDLHDLFTLGDNG 926
>gi|301114327|ref|XP_002998933.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4]
gi|262111027|gb|EEY69079.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4]
Length = 1052
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 212/573 (36%), Positives = 309/573 (53%), Gaps = 55/573 (9%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTL 363
L PHQRE L WL LH +G GGILGDDMGLGKT+Q+ FL L +R ++ L++ P ++
Sbjct: 226 LLPHQRECLEWLHKLHERGVGGILGDDMGLGKTVQLASFLGSLHAARRLRTVLLLCPASV 285
Query: 364 LSHWIKEL--TAVGLSAKIREYFGTCVKTRQYELQY----------------------VL 399
L W++EL A + + GT V Y +
Sbjct: 286 LLQWVRELHKWAPWMRVVLLHASGTGVSASSSSECYEQLIEDVFRFDDDEEEDVGDPGLR 345
Query: 400 QDK----GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRA 455
QD GV+++TY+ VR S F++ E WDY++LDEGH I+NP +
Sbjct: 346 QDSPTGGGVVISTYENVRQYQ-----SLFLTRE-------WDYVVLDEGHRIRNPDAETT 393
Query: 456 KSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHA 515
++ + HRII+SGTPIQN L+ELW+LF+F P LG F +++ LPI G A
Sbjct: 394 LVCKQLRTVHRIILSGTPIQNRLRELWSLFDFVYPGRLGTLPTFDDEFVLPIRAGGYATA 453
Query: 516 LDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQR 575
+ + A L++ IQP+ LRR K EV D +S+ L K E I++ RLT QR
Sbjct: 454 TKMQVLMAYKCALALKDLIQPFLLRRTKQEVMATD--ANSSMLPGKQEQILFCRLTQRQR 511
Query: 576 QLYEAFLNSEIVLSAF--DGSPLAALTILKKICDHPLLLTKRAAEDVLDG--MDSMLNPE 631
LY+ FL S V S D P A+++L+ IC+HP LL + D E
Sbjct: 512 ALYKRFLASPEVASVLRRDLRPFRAISVLRHICNHPDLLATFGDGGLADKKRQSYFKEEE 571
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHD------NISCKISFILSLLDKLIPEGHNVLIFSQ 685
+ E+ ++A + ++D + + D + S K+ + +L + H VL+F+Q
Sbjct: 572 EEEEGEEGFTNVAGLLDEDKEEGESDEPFGAASASGKMIVLQKVLTLWKEQKHRVLVFTQ 631
Query: 686 TRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLT 744
TR ML++++ + G+ R+DGTT ++R + ++ F D FLLT++ GG+G+
Sbjct: 632 TRSMLDILESFMSRLGHACTRLDGTTGVAERQQRLDAFNAPDSNLFAFLLTTRAGGIGVN 691
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
L ADRV+V DP WNPSTD Q+ +RA+RIGQ+K V VYRL+T GT+EEKIY +QIFK L
Sbjct: 692 LVGADRVVVFDPDWNPSTDVQARERAWRIGQQKPVTVYRLVTAGTIEEKIYHRQIFKQYL 751
Query: 805 FKTATEHKEQIRYFSQQDLRELLSLP--KQGFD 835
++ R F++ LR+L L K+G D
Sbjct: 752 TSKVLHDAKRKRCFNKHSLRDLFVLADEKEGED 784
>gi|326434134|gb|EGD79704.1| hypothetical protein PTSG_10689 [Salpingoeca sp. ATCC 50818]
Length = 1641
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 205/569 (36%), Positives = 300/569 (52%), Gaps = 83/569 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS------ 349
+PG + + L+P+Q E +RWL SL G GG+LGD+MGLGKT+Q+ FLAGL +
Sbjct: 673 VPGFLWSKLYPYQHECVRWLASLQTSGVGGVLGDEMGLGKTIQVIAFLAGLMYGTPTTSV 732
Query: 350 -RLIKRA-----LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCV--KTRQYELQYVLQD 401
R ++R+ LVV P T++ HW++E + F CV + YE + L
Sbjct: 733 RRHVRRSSNGAILVVCPATVVHHWVREF------HRWWAPFRVCVLHSSGNYEGRESLVR 786
Query: 402 K-------GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQR 454
+ VL+TTY +R + + W Y +LDEGH I+NP Q
Sbjct: 787 RIARGGAGHVLITTYSTLRTAHTDI----LVRHR-------WHYAVLDEGHKIRNPDAQV 835
Query: 455 AKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKH 514
++ + HR++++GTPIQNNLKELW+LF+F P LG F ++ P++ G+ +
Sbjct: 836 TIIAKQLKTEHRLLLTGTPIQNNLKELWSLFDFVHPGRLGQLPTFTNEFITPMMVGSYAN 895
Query: 515 ALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQ 574
A +++ A LR+ I+P L R K DV + +L +NE I++ +LT Q
Sbjct: 896 ATEKQVHAAYRCACVLRDTIRPCMLHRSKA------DVQAQISLPPRNEQILFCKLTDDQ 949
Query: 575 RQLYEAFLNSEIV-------LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSM 627
R LYE FL S V L+AF G + +L+KIC+HP D S+
Sbjct: 950 RALYEHFLASRDVGEILRGELTAFHG-----IDLLRKICNHP------------DLAPSL 992
Query: 628 LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
+P D +D + ++ S K+ + LL + H VL+F QTR
Sbjct: 993 ADPPD----------YSDPSVPLPWER-----SGKMIVLRQLLRIWFQKQHRVLLFCQTR 1037
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
+MLN+++ I + Y +LR+DGT R ++ F + IF+LT++ GGLGL LT
Sbjct: 1038 QMLNMLESFIKYEHYTYLRLDGTVSVKQRQPLIRYFNDNPEVFIFILTTRTGGLGLNLTG 1097
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
ADRVI+ DP WNPS D Q+ +RA+RIGQ+K V +YRL+T GT+EEKIY +Q+FK L
Sbjct: 1098 ADRVIIFDPDWNPSVDVQAKERAWRIGQQKPVTIYRLLTAGTIEEKIYHRQVFKQLLTFK 1157
Query: 808 ATEHKEQIRYFSQQDLRELLSLPKQGFDV 836
+ +Q R+F DL EL L D
Sbjct: 1158 VMKDPKQRRFFKSSDLHELFVLGDAAHDT 1186
>gi|443429408|gb|AGC92693.1| DNA excision repair protein ERCC-6-like protein [Heliconius erato]
Length = 947
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 198/552 (35%), Positives = 296/552 (53%), Gaps = 63/552 (11%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL---- 351
+P I L+ +Q+ G++WLW LH GG+LGD+MGLGKT+QI FLAGL S
Sbjct: 168 IPNYIWKRLYTYQKVGVKWLWELHQVQSGGLLGDEMGLGKTVQIIAFLAGLSKSDSGSWG 227
Query: 352 -IKRALVVAPKTLLSHWIKELT--AVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTT 408
+ +++AP T++ W+ L + + G+ Q ++ + G+LL T
Sbjct: 228 GLGPTIILAPATVIYQWVSHFHYWCPNLRVAVLHHSGSHGGNHQKLIRELHSSHGILLIT 287
Query: 409 YDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRII 468
Y+ + K L W Y+ILDEGH I+NP TQ +K + + + H+I+
Sbjct: 288 YNGIVKYIKDLLTKK------------WHYVILDEGHKIRNPDTQVSKLVKKFDTPHKIL 335
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
I+G+P+QN+L+ELW+LF+F P LLG F + + PI +G +A ++ +AK
Sbjct: 336 ITGSPMQNSLQELWSLFDFMRPGLLGTYNAFMDHFATPITQGGYANATQHQEATALEIAK 395
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
L+ I PY LRR K EV L +KNE +++ LT QR LY +L S V
Sbjct: 396 ALKNIITPYILRRTKAEV------QEHIKLPEKNEQVLFCALTREQRDLYMGYLMSSTVR 449
Query: 589 SAFD-----GSP-----LAALTILKKICDHP-LLLTKRAAEDVLDGMDSMLNPEDAALAE 637
S D G P L ALT L+KIC+HP L L + +D +S N +
Sbjct: 450 SILDKDFKFGDPFRARVLVALTTLRKICNHPDLYLYEAHDDDEEIDEESFGNWKR----- 504
Query: 638 KLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESI 697
S K+S + SLL + +GH LIFSQ+R ML ++++ +
Sbjct: 505 ----------------------SGKMSVVHSLLKIWLKQGHRTLIFSQSRAMLCILEQHL 542
Query: 698 GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPA 757
+++L++DGT + R ++ F E +FL T++VGGLG+ LT ADRVI+ DP
Sbjct: 543 QKHKFEYLKMDGTVSVAQRQNLIKTFNENAKYLVFLATTRVGGLGVNLTGADRVIIYDPD 602
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRY 817
WNP+TDNQ+ +RA+RIGQ+++V VYRL++ GT+EEKIY++QIFK L Q
Sbjct: 603 WNPATDNQAKERAWRIGQQRNVTVYRLLSAGTIEEKIYQRQIFKNFLSNKILVDPNQKNV 662
Query: 818 FSQQDLRELLSL 829
+ +L+ L +L
Sbjct: 663 LTTSNLQTLFNL 674
>gi|410730645|ref|XP_003980143.1| hypothetical protein NDAI_0G04840 [Naumovozyma dairenensis CBS 421]
gi|401780320|emb|CCK73467.1| hypothetical protein NDAI_0G04840 [Naumovozyma dairenensis CBS 421]
Length = 1090
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 222/618 (35%), Positives = 327/618 (52%), Gaps = 100/618 (16%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG I ++LF +Q+ ++WL+ LH Q GGI+GD+MGLGKT+QI FLA L HS L+
Sbjct: 308 FKIPGDIFSLLFNYQKTCVQWLYELHQQNSGGIIGDEMGLGKTIQIIAFLASLHHSGLLD 367
Query: 354 -RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQY------ELQYVLQDKGV 404
L+V P T++ W EL I G+ + Q E + +L +
Sbjct: 368 GPVLIVCPATVMKQWCNELHHWWPPFRTIILHSIGSGMGINQKKNLSDEEFENLLMNSNP 427
Query: 405 LLTTYDIVRNNSK--------------SL------RGSSFISDEAG---DDDAI----WD 437
+Y+ ++NN+K SL +G I+ G D + W
Sbjct: 428 NDISYEDLQNNTKRKTKSHLENDINIQSLINTVIEKGHIIITTYVGLRLHSDKLLNVNWS 487
Query: 438 YMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNK 497
Y ILDEGH I+NP + + + +I + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 488 YAILDEGHKIRNPDSDISITCKKIKTHNRIILSGTPIQNNLIELWSLFDFIYPGKLGTLP 547
Query: 498 WFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT 557
F++++ +PI G +A + + + G A LR+ I PY LRR+KN+V +
Sbjct: 548 VFQQQFIIPINTGGYANASNIQVQTGIKCATALRDLISPYLLRRVKNDV--------AKD 599
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS--PLAALTILKKICDHPLLLTKR 615
L +K EM+++ +LT QR Y FLNS + G L + IL+KIC+HP L+ +
Sbjct: 600 LPEKKEMVLFCKLTQYQRIKYLEFLNSNELTQIKGGKRHVLYGIDILRKICNHPDLIDRN 659
Query: 616 AAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIP 675
+ LD NP+ S K+ + LL
Sbjct: 660 EKQYDLD----YGNPKR---------------------------SGKMQVVKQLLLLWHN 688
Query: 676 EGHNVLIFSQTRKMLNLIQESIGSK---------GYKFLRIDGTTKASDRVKIVNDFQEG 726
E H VL+F+Q+R+ML++++ I S+ K+LR+DGTT S+R K+V+ F
Sbjct: 689 EKHKVLLFTQSRQMLDILENFINSELKSHSEFSTPLKYLRMDGTTNISNRQKLVDQFNNE 748
Query: 727 DVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMT 786
D +FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM
Sbjct: 749 DY-DVFLLTTRVGGLGINLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMV 807
Query: 787 CGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
G++EEKIY +QIFK L +Q R+F +LR+L +L G D L ++L+ E
Sbjct: 808 AGSIEEKIYHRQIFKQFLTNKILTDPKQKRFFKMNELRDLFTL---GGDDGLASEELNNE 864
Query: 847 HGDQHNMDESLEAHIQFL 864
LE H Q L
Sbjct: 865 ----------LEKHTQSL 872
>gi|358399258|gb|EHK48601.1| hypothetical protein TRIATDRAFT_53490 [Trichoderma atroviride IMI
206040]
Length = 1133
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 202/565 (35%), Positives = 300/565 (53%), Gaps = 78/565 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
LPG I LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q+ F+A L +S+ +K+
Sbjct: 365 LPGDIYPSLFGYQKTGVQWLAELYKQSVGGIIGDEMGLGKTVQLIAFIAALHYSKKLKKP 424
Query: 355 ALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQY--------------- 397
+VVAP TLL W+ E L I G+ + E +Y
Sbjct: 425 VIVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPTAEDEYDVEHFSPMATKSEKA 484
Query: 398 -------VLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNP 450
V+Q VL+TTY ++ + L WDY +LDEGH I+NP
Sbjct: 485 ARKIVKGVVQKGHVLVTTYTGLQTYADELLHVE------------WDYAVLDEGHKIRNP 532
Query: 451 STQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRG 510
+ + + E+ + +R+I+SGTP+QNNL ELW+LF+F P LG FK+++E+PI +G
Sbjct: 533 NAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFKQQFEIPIRQG 592
Query: 511 NDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRL 570
+A + + A+ L+E I Y L+RLK +V +A L +K E +++ +L
Sbjct: 593 GYANASNLQVMTAEKCAEALKETISEYLLQRLKVDV--------AADLPEKTEQVLFCKL 644
Query: 571 TSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
T QR+ YE F+ S+ V + + L + IL+KIC+HP LL
Sbjct: 645 TESQRKAYERFIGSDEVAAILNRKRQSLYGIDILRKICNHPDLL---------------- 688
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK-LIPEGHNVLIFSQTR 687
D +L K D +S K+ LL K +IP GH +L+FSQ +
Sbjct: 689 ---DKSLPSKPGYDYGD-----------PKLSAKLQLTKDLLQKVMIPNGHKMLLFSQGK 734
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
+MLN+I++ I G +LR+DG T R +++ F +FL+T++ GGLG LT
Sbjct: 735 QMLNIIEKCIRECGISYLRMDGETPIDQRQPMIDKFNTDPDIHVFLMTTRTGGLGTNLTG 794
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
ADR+I+ DP WNPSTD Q+ +RA+R+GQ K V +YRLMT GT+EEKIY +QIFK +
Sbjct: 795 ADRIIIFDPDWNPSTDLQARERAWRLGQSKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNK 854
Query: 808 ATEHKEQIRYFSQQDLRELLSLPKQ 832
+ +Q + DL +L + K
Sbjct: 855 VLKDPKQRSSYDLSDLYDLFTFDKH 879
>gi|366988021|ref|XP_003673777.1| hypothetical protein NCAS_0A08380 [Naumovozyma castellii CBS 4309]
gi|342299640|emb|CCC67396.1| hypothetical protein NCAS_0A08380 [Naumovozyma castellii CBS 4309]
Length = 1079
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 222/642 (34%), Positives = 333/642 (51%), Gaps = 110/642 (17%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
++ +PG I ++LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+QI FLA L HS L+
Sbjct: 293 SFKIPGDIFSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQIIAFLASLHHSGLL 352
Query: 353 K-RALVVAPKTLLSHWIKEL--------------TAVGLSAK------------------ 379
L+V P T++ W EL T G+S K
Sbjct: 353 NGPVLIVCPATVMKQWCNELHHWWPPLRTIILHSTGSGMSTKKNFSEEELEQAMMNANPN 412
Query: 380 --IREYFGTCVKTR---------QYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDE 428
E F KT+ Q + V+ D +++TTY +R +S+ L +
Sbjct: 413 ELTCEDFQNRSKTKASLESTFNIQSLIDKVINDGHIIITTYVGLRIHSEQLLKVN----- 467
Query: 429 AGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFC 488
W Y +LDEGH I+NP + + + +I + +RII+SGTPIQNNL ELW+LF+F
Sbjct: 468 -------WAYAVLDEGHKIRNPDSDISLTCKKIKTPNRIILSGTPIQNNLIELWSLFDFI 520
Query: 489 CPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFH 548
P LG F++++ +PI G +A + + + G A LR I PY LRR+K++V
Sbjct: 521 YPGKLGTLPVFQQQFVMPINAGGYANATNIQVQTGVKCATALRNLISPYLLRRVKSDV-- 578
Query: 549 EDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKIC 606
+ L +K EM+++ +LT Q+ Y FLNS + G L + IL+KIC
Sbjct: 579 ------AKDLPEKKEMVLFCKLTQYQKNRYLEFLNSNELTQIRGGRRHVLYGIDILRKIC 632
Query: 607 DHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFI 666
+HP LL + + D NP+ S K+ +
Sbjct: 633 NHPDLLEREERQYETD----YGNPKR---------------------------SGKMQVV 661
Query: 667 LSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVN 721
LL EGH L+F+Q+R+ML+++++ I K K+LR+DGT+ S R +V+
Sbjct: 662 KQLLLLWHKEGHKTLLFTQSRQMLDILEQFIQFKDSDLSVLKYLRMDGTSNISKRQGLVD 721
Query: 722 DFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 781
F D +FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +
Sbjct: 722 QFNNEDY-DVFLLTTRVGGLGVNLTGANRIIIYDPDWNPSTDMQARERAWRIGQKREVSI 780
Query: 782 YRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQ 841
YRLM G++EEKIY +QIFK L +Q R+F +LR+L +L G D L +
Sbjct: 781 YRLMVSGSIEEKIYHRQIFKQFLTNKILTDPKQKRFFKMNELRDLFTL---GGDNGLASE 837
Query: 842 QLHEEHGDQHN---MDESLEAHIQFLDTLGIAGVSHHSLLFS 880
+L EE D+H + E F + ++GVS F+
Sbjct: 838 ELSEE-VDRHTSSLKNSKTEESDDFEQVINLSGVSKLESFFN 878
>gi|410080572|ref|XP_003957866.1| hypothetical protein KAFR_0F01350 [Kazachstania africana CBS 2517]
gi|372464453|emb|CCF58731.1| hypothetical protein KAFR_0F01350 [Kazachstania africana CBS 2517]
Length = 1058
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 212/594 (35%), Positives = 323/594 (54%), Gaps = 86/594 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG+I ++LF +Q+ ++WL+ L Q GGI+GD+MGLGKT+Q+ F+A L HS L+
Sbjct: 276 FKIPGEIYSLLFGYQKTCVQWLYELFQQQSGGIIGDEMGLGKTIQVIAFVASLHHSGLLN 335
Query: 354 -RALVVAPKTLLSHWIKEL--------------TAVGLSAKIR---------------EY 383
L+V P T++ W+ EL G+S K + +
Sbjct: 336 GPVLIVCPATVMKQWVNELHHWWPPLRAIILHAIGSGMSMKKKLTEDELEQILLRSTPDE 395
Query: 384 FGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI---WDYMI 440
F + + +Y L+ L++ D V NN L ++++ D + W Y I
Sbjct: 396 FSYNDFQKSSKAKYALESDMNLVSLIDKVVNNGHILI-TTYVGLRIHSDKLLKINWAYAI 454
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP+++ A + ++ + +RII+SGTPIQNNL ELW+LF+F P LG F+
Sbjct: 455 LDEGHKIRNPNSEIAITCKKLKTRNRIILSGTPIQNNLNELWSLFDFILPGKLGTLPVFQ 514
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
+++ +PI G +A + + + G A LR+ I PY LRR+K++V + L
Sbjct: 515 QQFVMPINMGGYANASNIQVQTGYKCAVTLRDIISPYLLRRVKSDV--------AKDLPH 566
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP---LAALTILKKICDHPLLLTKRAA 617
K EM+++ +LT QR Y FLNS+ LS G L + IL+KIC+HP +L K
Sbjct: 567 KKEMVLFCKLTQYQRNKYIEFLNSK-ELSEIKGGKRHVLYGIDILRKICNHPDILDKDKL 625
Query: 618 EDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
ED + S NP+ S K+ + LL EG
Sbjct: 626 EDDV----SYGNPKR---------------------------SGKMQVVKQLLLLWKDEG 654
Query: 678 HNVLIFSQTRKMLNLIQESIGSK-----GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIF 732
H L+F+Q+R+ML+++++ I K +LR+DGTT S R ++V+ F + +F
Sbjct: 655 HKTLLFTQSRQMLDILEQFISYKDPEMENINYLRMDGTTNISKRQELVDRFNNENY-DLF 713
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM G++EE
Sbjct: 714 LLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVSGSIEE 773
Query: 793 KIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
KIY +QIFK L +Q R+F +L +L SL G D + ++L EE
Sbjct: 774 KIYHRQIFKQFLTNKILSDPKQKRFFKMNELHDLFSL---GGDDGVLNERLTEE 824
>gi|219110099|ref|XP_002176801.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411336|gb|EEC51264.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 711
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 220/612 (35%), Positives = 328/612 (53%), Gaps = 64/612 (10%)
Query: 315 LWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELT-- 372
+W LH + GGI+GD+MGLGKT+Q F+ L SR +K L+++P T+L HW+ EL
Sbjct: 1 MWKLHQEEAGGIIGDEMGLGKTVQASSFIGVLAASRKLKSVLIISPATMLQHWLNELAVW 60
Query: 373 AVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDD 432
A GL + G ++T V+LTTY+ VR N+ ++ A
Sbjct: 61 APGLRRILIHQSGEDLET--LPSHSFCGTGYVVLTTYENVRRNT------DIYTEHA--- 109
Query: 433 DAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPEL 492
W Y++LDE I+NP + I + HR+ +SGTPIQN+LKELW+LF+F P
Sbjct: 110 ---WSYVVLDEAQKIRNPDADITLACKRIRTPHRLAMSGTPIQNDLKELWSLFDFVFPGR 166
Query: 493 LGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDV 552
LG F++++ I RG +A + ++ A LR+ I PY LRR K DV
Sbjct: 167 LGTLPAFEQEFADTIKRGGYSNASPMQVQLAYRCAMVLRDLINPYLLRRQKK------DV 220
Query: 553 TSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPL 610
+ + K E +++ RL+ QR LYEAFL S+ V GS AA+T+L+KIC+HP
Sbjct: 221 IEVSRMPGKTEHVLFCRLSQRQRALYEAFLLSDEVTKVVKGSKQLFAAVTMLRKICNHP- 279
Query: 611 LLTKRAAEDVLDGMDSMLNPEDAALAEKLAM-HIADVAEKDDFQEQHDNISCKISFI--- 666
D +P++A+ + ++ +D + +I + S +
Sbjct: 280 --------------DLACDPDEASFESFVRNGYVNQGDLDEDLSDLDSDIGEEKSLVERS 325
Query: 667 --LSLLDKLIP----EGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIV 720
L +L K++P +GH VLIF Q RKML++I+ I K +KF R+DG T + R ++V
Sbjct: 326 GKLEVLSKILPLWKKQGHRVLIFCQWRKMLDIIERLIMLKEWKFGRLDGNTNVASRQRLV 385
Query: 721 NDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVV 780
+ F + L T++ GG+GL LT A+R+I+ DP WNP TD Q+ +RA+R GQ+++V
Sbjct: 386 DQFNSDESYFGMLCTTRTGGVGLNLTGANRIILYDPDWNPQTDAQARERAWRFGQEREVT 445
Query: 781 VYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDV---- 836
VYRL+T GT+EEKIY++QIFK L + Q R FSQ+DLR+L +L V
Sbjct: 446 VYRLITAGTIEEKIYQRQIFKTALSNKVLQDPRQRRLFSQKDLRDLFTLKADAGSVRSGG 505
Query: 837 -SLTQQQLHEEHGDQHNMDE------SL---EAHIQFLDTLGIAGVSHHSLL-FSKTARV 885
LT+ HG N+DE SL EA + + G+AGV H+ + T +
Sbjct: 506 EGLTETGAITRHGGVVNIDEDPTDEPSLDNDEALKTVMRSRGLAGVFDHNFVEIDSTKKS 565
Query: 886 QVVQEEEEATRR 897
+ ++E EE +R
Sbjct: 566 RTLREMEEEAKR 577
>gi|407409618|gb|EKF32370.1| DNA excision/repair protein SNF2, putative [Trypanosoma cruzi
marinkellei]
Length = 706
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 206/573 (35%), Positives = 313/573 (54%), Gaps = 62/573 (10%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
T + +I + LF +QREG++WL+ H +G+G +L D+MGLGKT+QI FL L+ S+L
Sbjct: 58 TLPISPEIESKLFEYQREGVQWLYERHRKGRGCLLADEMGLGKTVQIASFLGALYMSKLA 117
Query: 353 KRALVVAPKTLLSHWIKELTAVG-LSAKIREYFGTCVKTRQYELQYVLQ--DKGVLLTTY 409
+++ P TLL W L G L + E KT++ + L+ + LTTY
Sbjct: 118 TSTIIIVPPTLLPIWGSALQQWGRLGPPVVEVIHNDAKTKRLQRWQRLKHGTPCLFLTTY 177
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
++R +S S+ G + DY+I+DE HLIK+ ST +S + + + HRI I
Sbjct: 178 GVLRQDS-SVMGVRMV-----------DYIIMDEAHLIKDASTHVFQSAMALSARHRIAI 225
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
+GTP+ NN ++LW++F+F +LG + +LRGN++ AL+ E+
Sbjct: 226 TGTPLMNNFEDLWSIFHFIDGSILGTTRADFRSINAVLLRGNERDALENERSDAGRQLAL 285
Query: 530 LRERIQPYFLRRLKNE--VFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSE-- 585
++ I+P+ LRR K + + H K ++I+WLRL Q Q Y + L +E
Sbjct: 286 IQAAIRPFMLRRDKRQLQMLH----------VGKRDLIIWLRLNETQEQQYVSLLKTERV 335
Query: 586 -IVLSAFDGS-PLAALTILKKICDHPLL-LTKRAAEDVLDGMDSMLNPEDAALAEKLAMH 642
+ L + D S PL LT L + CDHP L L+ A + + D + +PE
Sbjct: 336 DVTLRSADTSQPLVLLTSLMRTCDHPWLSLSDEAYREAMQ--DPLASPE----------- 382
Query: 643 IADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGY 702
A+ D S KIS L+L+ K I E L+FS+++++L+L+ ++
Sbjct: 383 -ANRNCGDALN------SSKISLALALVVKCIGEQRKTLVFSRSKRLLDLLAVALRCWWI 435
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
F R+DG A +R+K V +F + + +FLLT+QVGG+GLT+ A VI++DP+WNPS+
Sbjct: 436 DFARLDGDVPAEERLKTVQEFSQSERLLVFLLTTQVGGVGLTVEAASAVIIMDPSWNPSS 495
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQ-------- 814
D Q++DR +RIGQ +DVVVYRL+TCGTVEEK+YR Q+FK K T EQ
Sbjct: 496 DAQAIDRVHRIGQTRDVVVYRLITCGTVEEKVYRNQVFKVMAAKQGTSVNEQAGREGAEF 555
Query: 815 IRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEH 847
RYF++ LR + + + D S T QL H
Sbjct: 556 YRYFTRLQLRSMFDV--RTLDHSETAAQLESLH 586
>gi|255720394|ref|XP_002556477.1| KLTH0H14300p [Lachancea thermotolerans]
gi|238942443|emb|CAR30615.1| KLTH0H14300p [Lachancea thermotolerans CBS 6340]
Length = 1037
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 213/604 (35%), Positives = 315/604 (52%), Gaps = 106/604 (17%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLI 352
+ +PG+I LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+QI FLA L HS +L
Sbjct: 259 FRIPGEIFQSLFNYQKTCVQWLYELYQQQCGGIIGDEMGLGKTIQIIAFLASLHHSGKLN 318
Query: 353 KRALVVAPKTLLSHWIKE------------LTAVGLSA---------KIREYFGTCVK-- 389
LVV P T+L W KE L ++G K+ E F
Sbjct: 319 GPILVVCPATVLRQWCKEFHTWWPPFRAIILHSIGAGMTQKENLSEQKLEELFMNSNPEE 378
Query: 390 --------------------TRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEA 429
TR + V+ D VL+TTY +R +S L
Sbjct: 379 FSFDAYTNSKRTKSILESSLTRDNLINKVVTDGHVLITTYVGLRIHSDKLL--------- 429
Query: 430 GDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCC 489
+ W Y +LDEGH I+NP + + ++ + +RII+SGTPIQNNL ELW+LF+F
Sbjct: 430 ---NVRWGYAVLDEGHKIRNPDADISLTCKQLKTKNRIILSGTPIQNNLTELWSLFDFIF 486
Query: 490 PELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHE 549
P LG F++++ +PI G +A + + + G A LR I PY LRR+K +V
Sbjct: 487 PGRLGTLPVFQQQFSVPINMGGYANATNIQVQTGYKCAVALRNLISPYLLRRIKADV--- 543
Query: 550 DDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICD 607
+ L +KNEM+++ +LT QR Y FLNSE ++ +G L + IL+KIC+
Sbjct: 544 -----AKDLPRKNEMVLFCKLTQYQRNKYLQFLNSEDLVKIKNGKRQVLFGIDILRKICN 598
Query: 608 HPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFIL 667
HP LL + ++ DS +P+ S K+ +
Sbjct: 599 HPDLLEREQRQN----EDSYGDPKR---------------------------SGKMQVVK 627
Query: 668 SLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVND 722
LL +GH L+F+Q+R+ML++++ I K +LR+DGTT R +V+
Sbjct: 628 QLLKLWHSQGHKTLLFTQSRQMLDILERFISYKDPELEELTYLRMDGTTSIGARQALVDS 687
Query: 723 FQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVY 782
F G +FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQ+++V +Y
Sbjct: 688 FNNGSY-DVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQRREVTIY 746
Query: 783 RLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQ 842
RLM G++EEKIY +QIFK L +Q R+F +L++L +L G + LT +
Sbjct: 747 RLMIAGSIEEKIYHRQIFKQFLTNKILTDPKQKRFFKMNELQDLFTL---GGETGLTNEN 803
Query: 843 LHEE 846
L E
Sbjct: 804 LESE 807
>gi|261335950|emb|CBH09283.1| putative DNA excision repair protein ERCC-6 [Heliconius melpomene]
Length = 944
Score = 336 bits (861), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 220/669 (32%), Positives = 336/669 (50%), Gaps = 88/669 (13%)
Query: 204 QRQKKNEPKRVHDGERFNGQSFVSGGREEY----DDEDDCVIVSGKLVVNRPDRRDGKL- 258
Q K ++ D + S + G E+Y D+ED+ V + +RP + K+
Sbjct: 46 QINSKQRCNKIFDCQASTSSSKIVDGDEDYLPTCDEEDEDVYLCAAASTSRPRKNVKKII 105
Query: 259 ---------------NKSAHSGLVNVLDD--YSDD--SVLED-EGSITLSGPRSTYMLPG 298
S + L D+ YS D VL+D E S ++ +P
Sbjct: 106 DDGSKKLYNERIKIWRNSLKTALSGTYDEVYYSADIQYVLDDIEASDENHELQNGLCIPN 165
Query: 299 KIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-----IK 353
I L+ +Q+ G++W+W LH GG+LGD+MGLGKT+QI FLAGL S +
Sbjct: 166 YIWKRLYTYQKVGVKWVWELHQVQSGGLLGDEMGLGKTVQIIAFLAGLSKSDSGSWGGLG 225
Query: 354 RALVVAPKTLLSHWIKELT--AVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDI 411
+++AP T++ W+ L + + G+ Q ++ + G+LL TY+
Sbjct: 226 PTIILAPATVIYQWVSHFHYWCPNLRVAVLHHSGSHGGNHQKLIKELHSSHGILLITYNG 285
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
+ K L W Y+ILDEGH I+NP TQ +K + + + H+I+I+G
Sbjct: 286 IVKYIKDLLTKK------------WHYVILDEGHKIRNPDTQVSKLVKKFDTPHKILITG 333
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
+P+QN+L+ELW+LF+F P LLG F + + PI +G +A ++ +AK L+
Sbjct: 334 SPMQNSLQELWSLFDFMRPGLLGTYNAFMDHFATPITQGGYANATQHQEATALEIAKALK 393
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
I PY LRR K EV L +KNE +++ LT QR LY +L V S
Sbjct: 394 NIITPYILRRTKAEV------QEHIKLPEKNEQVLFCALTREQRDLYMGYLMGSTVRSIL 447
Query: 592 D-----GSP-----LAALTILKKICDHP-LLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
D G P L ALT L+KIC+HP L L + +D +S N +
Sbjct: 448 DKDSKFGDPIRARVLVALTTLRKICNHPDLYLYEAHDDDEDIDEESFGNWKR-------- 499
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK 700
S K+S + SLL + +GH LIFSQ+R ML ++++ +
Sbjct: 500 -------------------SGKMSVVHSLLKIWLKQGHRTLIFSQSRAMLCILEQHLQKH 540
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
+++L++DG+ + R ++ F E +FL T++VGGLG+ LT ADRVI+ DP WNP
Sbjct: 541 KFEYLKMDGSVSVAQRQNLIKTFNENAKYLVFLATTRVGGLGVNLTGADRVIIYDPDWNP 600
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQ 820
+TDNQ+ +RA+RIGQ+++V VYRL++ GT+EEKIY++QIFK L Q +
Sbjct: 601 ATDNQAKERAWRIGQQRNVTVYRLLSAGTIEEKIYQRQIFKNFLSNKILVDPNQKNVLTT 660
Query: 821 QDLRELLSL 829
+L+ L +L
Sbjct: 661 SNLQTLFNL 669
>gi|307209151|gb|EFN86289.1| DNA excision repair protein ERCC-6 [Harpegnathos saltator]
Length = 1005
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 204/565 (36%), Positives = 308/565 (54%), Gaps = 64/565 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I + L+ +Q+ ++WLW LH + GG+LGD+MGLGKT+Q+ FLAGL S L+
Sbjct: 250 FKVPQSIWDRLYRYQKIAVQWLWELHGRKLGGLLGDEMGLGKTVQVIAFLAGLDCSELLS 309
Query: 354 R---------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTC-VKTRQYELQYVLQDKG 403
+V+ P TL+ W+K ++ T K +L LQ G
Sbjct: 310 HNGRFRGLGPTIVICPVTLMEQWVKHFHEWWPFVRVVVLHHTGGYKGDPEDLIESLQTGG 369
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
+L+ +Y+ V + + S W Y+ILDEGH I+NP + ++++ + +
Sbjct: 370 ILIISYNGVLKHKDLIISSQ------------WHYVILDEGHTIRNPQVKISRAVKRLQT 417
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
HR++++G+P+QN+LKELW+LF+F P LG F E PI RG +A ++
Sbjct: 418 PHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPVFLEHCASPITRGGYVNATPLQEATA 477
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
VA L++ I PY LRR K +V H TL +KNE +++ LT Q++LY+ +L
Sbjct: 478 LQVATMLKDTITPYLLRRTKTDVKHH------LTLPEKNEQVLFCSLTDEQKKLYKKYLC 531
Query: 584 SEIVL------------SAFDGSPLAALTILKKICDHP-LLLTKRAAEDVLDGMDSMLNP 630
SE V + L AL+ L+KIC+HP L L R +DS
Sbjct: 532 SEDVSFILHEKTNHHESGRYRARFLIALSALRKICNHPDLFLYTRQ-------LDS---E 581
Query: 631 EDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKML 690
ED L+E+L EK + ++ + K++ + SLL +GH VL+F+Q +M+
Sbjct: 582 EDIDLSEELL-------EKFGYWKR----AGKMTVVRSLLKIWQKQGHRVLLFTQGIQMI 630
Query: 691 NLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADR 750
++++ + +GY +LR+DG+T S R ++ F +FLLT++VGGLGL LT A+R
Sbjct: 631 HILESLLQHEGYTYLRLDGSTAMSQRQHVIQMFNNNPSYFVFLLTTRVGGLGLNLTGANR 690
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE 810
VI+ DP WNP+TD Q+ RA+RIGQ K V +YRL+T GT+EEK+Y +QIFK L +
Sbjct: 691 VIIYDPDWNPATDAQARARAWRIGQNKQVTIYRLITAGTIEEKMYHRQIFKLLLSNKVLD 750
Query: 811 HKEQIRYFSQQDLRELLSL--PKQG 833
Q R F DL EL +L P G
Sbjct: 751 EPRQRRLFKTSDLVELFNLNEPTNG 775
>gi|302892777|ref|XP_003045270.1| transcription-coupled repair protein CSB/RAD26 [Nectria
haematococca mpVI 77-13-4]
gi|256726195|gb|EEU39557.1| transcription-coupled repair protein CSB/RAD26 [Nectria
haematococca mpVI 77-13-4]
Length = 1164
Score = 335 bits (859), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 202/562 (35%), Positives = 303/562 (53%), Gaps = 78/562 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
LPG I LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q+ FLA L +S+ + R
Sbjct: 390 LPGDIHPSLFGYQKTGVQWLAELYKQHVGGIVGDEMGLGKTVQLIAFLAALHYSKKLTRP 449
Query: 355 ALVVAPKTLLSHWIKE------------LTAVG---LSAKIRE-----YFGTCV----KT 390
+VVAP TLL W+ E L A G + K+ + +F K
Sbjct: 450 VIVVAPATLLRQWVSEFHRWWPPLRVAILHASGSGMMDPKVEDEADLDHFKPLATKSEKA 509
Query: 391 RQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNP 450
+ + V+++ VL+TTY ++ + +L WDY +LDEGH I+NP
Sbjct: 510 ARRIVNGVVKNGHVLVTTYAGLQTYADTLLPVH------------WDYAVLDEGHKIRNP 557
Query: 451 STQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRG 510
+ + + E+ + +R+I+SGTP+QNNL ELW+LF+F P LG F+ ++E+PI +G
Sbjct: 558 NAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRTQFEIPIRQG 617
Query: 511 NDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRL 570
+A + + A+ L+E I Y L+RLK +V +A L +K E +++ +L
Sbjct: 618 GYANASNLQVMTAEKCAEALKETISEYLLQRLKVDV--------AADLPEKTEQVLFCKL 669
Query: 571 TSCQRQLYEAFLNSEIVLSAFDGS--PLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
T QR+ YE FL S+ V S + L + IL+KIC+HP LL K
Sbjct: 670 TDGQRKAYETFLKSDEVSSILSRTRQSLYGIDILRKICNHPDLLDK-------------- 715
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK-LIPEGHNVLIFSQTR 687
+ K + + +S K+ LL K +IP GH L+FSQ +
Sbjct: 716 ----------------SLGSKPGYDFGNPKLSAKLQLTKDLLQKVMIPNGHKTLLFSQGK 759
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
+MLN+I++ I ++R+DG T R +++ F E +FL+T++ GGLG LT
Sbjct: 760 QMLNIIEKCIRECDISYVRMDGETPVDQRQPMIDKFNEDPNIHVFLMTTRTGGLGTNLTG 819
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
ADR+I+ DP WNPSTD Q+ +RA+R+GQKK V +YRLMT GT+EEKIY +QIFK +
Sbjct: 820 ADRIIIFDPDWNPSTDLQARERAWRLGQKKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNK 879
Query: 808 ATEHKEQIRYFSQQDLRELLSL 829
+ +Q + DL +L S
Sbjct: 880 VLKDPKQRSSYDLSDLYDLFSF 901
>gi|307191137|gb|EFN74835.1| DNA excision repair protein ERCC-6 [Camponotus floridanus]
Length = 983
Score = 335 bits (859), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 205/588 (34%), Positives = 309/588 (52%), Gaps = 75/588 (12%)
Query: 271 DDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDD 330
D+ + D+ L+ T S ++ + + P + ++WLW LH + GG++GD+
Sbjct: 162 DENNKDNTLQTIDEATCSNMQTNETINNSSDSEYIPSDNDSVQWLWELHSRKLGGLMGDE 221
Query: 331 MGLGKTMQICGFLAGLFHSRLIKR---------ALVVAPKTLLSHWIKELTAVGLSAKIR 381
MGLGKT+Q+ FLAGL S L+ +VV P TL+ W+K
Sbjct: 222 MGLGKTVQVIAFLAGLDCSELLSHNGRYRGLGPTIVVCPATLMEQWVKHF------HDWW 275
Query: 382 EYFGTCVKTRQ-------YELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDA 434
+F V L LQ G+L+T+Y+ + + L S
Sbjct: 276 PFFRVVVLHHSGGYNGDPESLIESLQTGGILVTSYNGILKHKDLLVSSQ----------- 324
Query: 435 IWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLG 494
W Y+ILDEGH I+NP + ++++ + + HR+++SG+P+QN+LKELW+LF+F P LG
Sbjct: 325 -WHYVILDEGHKIRNPQAKVSRAVKQFSTPHRLLLSGSPMQNSLKELWSLFDFILPGKLG 383
Query: 495 DNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTS 554
F E PI RG +A ++ VA L++ I PY LRR KN+V H
Sbjct: 384 TLPVFLEHCATPITRGGYANATSLQEATALQVATMLKDTITPYMLRRTKNDVKHH----- 438
Query: 555 SATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL-----------SAFDGSPLAALTILK 603
TL +KNE +++ LT Q++LY+ +L SE V + L AL+ L+
Sbjct: 439 -LTLPEKNEQVLFCSLTDEQKKLYKKYLCSEDVTFILHEKNNHDTGRYRARFLIALSALR 497
Query: 604 KICDHP--LLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISC 661
KIC+HP L T+ D ED L+E + EK + ++ +
Sbjct: 498 KICNHPDLFLYTREFDSD-----------EDITLSE-------EQLEKFGYWKR----AG 535
Query: 662 KISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVN 721
K++ + SLL + H VL+F+Q R+M+++++ + +GY +LR+DGTT S R + ++
Sbjct: 536 KMNVVRSLLKIWHKQQHRVLLFTQGRQMMHILESLLQREGYTYLRMDGTTAMSQRQQTIH 595
Query: 722 DFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 781
F +FLLT++VGGLG+ L ADRVI+ DP WNP+TD Q+ +RA+RIGQ K V V
Sbjct: 596 TFNNRPSYFVFLLTTRVGGLGVNLIGADRVIIYDPDWNPATDAQARERAWRIGQNKQVTV 655
Query: 782 YRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
YRL+T GT+EEK+Y +QIFK L + Q R F DL EL +L
Sbjct: 656 YRLITAGTIEEKMYHRQIFKLLLSNKVLDDPRQRRLFKTTDLVELFNL 703
>gi|400599789|gb|EJP67480.1| transcription-coupled repair protein CSB/RAD26 [Beauveria bassiana
ARSEF 2860]
Length = 1154
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 198/564 (35%), Positives = 299/564 (53%), Gaps = 78/564 (13%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
T LPG I LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q+ FLA L S+ +
Sbjct: 386 TLKLPGDIHPSLFGYQKTGVQWLAELYKQRVGGIVGDEMGLGKTVQLIAFLAALHSSKKL 445
Query: 353 KR-ALVVAPKTLLSHWIKELTAVGLSAKI------------------------REYFGTC 387
KR +VVAP TLL W+ E ++ R G
Sbjct: 446 KRPVIVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPTAEDDYDLDHFRPVAGKS 505
Query: 388 VKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLI 447
VK + ++ V+ VL+TTY ++ ++ L W+Y +LDEGH I
Sbjct: 506 VKAARRIIRAVVDKGHVLVTTYTGLQTYAEELLRVE------------WEYAVLDEGHKI 553
Query: 448 KNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPI 507
+NP+ + + E+ + +R+I+SGTP+QNNL ELW+LF+F P LG F+ ++E+PI
Sbjct: 554 RNPNAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRTQFEIPI 613
Query: 508 LRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVW 567
+G +A + + A+ L+E I Y L+RLK +V +A L +K E +++
Sbjct: 614 RQGGYANASNLQVMTAEKCAEALKETISEYLLQRLKVDV--------AADLPEKTEQVLF 665
Query: 568 LRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
+LT QR+ YE FL S+ V + + L + IL+KIC+HP LL K+
Sbjct: 666 CKLTDGQRKAYETFLGSDEVSAILNRRRQSLYGIDILRKICNHPDLLDKK---------- 715
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK-LIPEGHNVLIFS 684
++EK + +S K+ LL +IP GH +L+FS
Sbjct: 716 --------------------LSEKAGYDYGSPRLSTKLQLTKDLLQNVMIPNGHKMLLFS 755
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
Q + MLN+I++ + G +LR+DG T R +++ F +FL+T++ GGLG
Sbjct: 756 QGKLMLNIIEKCMRDCGISYLRMDGETPVDQRQPMIDRFNNDPDVHVFLMTTRTGGLGTN 815
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
LT ADR+I+ DP WNPSTD Q+ +RA+R+GQ K V +YRLMT GT+EEKIY +QIFK +
Sbjct: 816 LTGADRIIIFDPDWNPSTDLQARERAWRLGQNKPVKIYRLMTEGTIEEKIYHRQIFKQFM 875
Query: 805 FKTATEHKEQIRYFSQQDLRELLS 828
+ +Q + DL +L +
Sbjct: 876 TNKVLKDPKQRSSYDLSDLYDLFT 899
>gi|391873750|gb|EIT82758.1| transcription-coupled repair protein CSB/RAD26 [Aspergillus oryzae
3.042]
Length = 1196
Score = 335 bits (858), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 212/574 (36%), Positives = 312/574 (54%), Gaps = 86/574 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y +PG I +LF +Q+ G++WLW L Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 393 YRIPGDIYPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLHYSKKLT 452
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGL----------------SAKIRE 382
K ++V P T++ W+ E + G+ + R
Sbjct: 453 KPVIIVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSREDALLSQTWDSRR 512
Query: 383 YFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
G R+ ++ V+++ VL+TTY ++ + L I E W +LD
Sbjct: 513 SLGGLKAGRKV-VKRVVEEGHVLVTTYSGLQTYTPLL-----IPVE-------WGCAVLD 559
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
EGH I+NP+T E+ + HRII+SGTP+QNNL ELW+LF+F P LG F+ +
Sbjct: 560 EGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQ 619
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
+E PI +G +A + + + + A+ L++ I PY L+R K +V +A L KK+
Sbjct: 620 FEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPKKS 671
Query: 563 EMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDV 620
E +++ +LT QRQ Y++FL SE + S G L + IL+KIC+HP L +
Sbjct: 672 EQVLFCKLTKLQRQAYKSFLGSEEMQSILRGRRQVLYGVDILRKICNHPDLQS------- 724
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
KL H A D S K+ + SLL+ GH
Sbjct: 725 ----------------HKLTSHKAGYGNPDK--------SGKMQVVKSLLELWKDTGHKT 760
Query: 681 LIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
L+F+Q R ML+++Q+ + S G+ + R+DGTT + R +V++F +FLLT++VG
Sbjct: 761 LLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQSMVDEFNNNPDLHVFLLTTKVG 820
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+DV VYRLMT GT+EEKIY +QI
Sbjct: 821 GLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIEEKIYHRQI 880
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
FK L + +Q + F DL +L SL + G
Sbjct: 881 FKQFLTNKILKDPKQRQTFQLSDLHDLFSLGEDG 914
>gi|317156769|ref|XP_001825991.2| DNA repair protein Rhp26/Rad26 [Aspergillus oryzae RIB40]
Length = 1192
Score = 335 bits (858), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 212/574 (36%), Positives = 312/574 (54%), Gaps = 86/574 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y +PG I +LF +Q+ G++WLW L Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 389 YRIPGDIYPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLHYSKKLT 448
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGL----------------SAKIRE 382
K ++V P T++ W+ E + G+ + R
Sbjct: 449 KPVIIVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSREDALLSQTWDSRR 508
Query: 383 YFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
G R+ ++ V+++ VL+TTY ++ + L I E W +LD
Sbjct: 509 SLGGLKAGRKV-VKRVVEEGHVLVTTYSGLQTYTPLL-----IPVE-------WGCAVLD 555
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
EGH I+NP+T E+ + HRII+SGTP+QNNL ELW+LF+F P LG F+ +
Sbjct: 556 EGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQ 615
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
+E PI +G +A + + + + A+ L++ I PY L+R K +V +A L KK+
Sbjct: 616 FEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPKKS 667
Query: 563 EMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDV 620
E +++ +LT QRQ Y++FL SE + S G L + IL+KIC+HP L +
Sbjct: 668 EQVLFCKLTKLQRQAYKSFLGSEEMQSILRGRRQVLYGVDILRKICNHPDLQS------- 720
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
KL H A D S K+ + SLL+ GH
Sbjct: 721 ----------------HKLTSHKAGYGNPDK--------SGKMQVVKSLLELWKDTGHKT 756
Query: 681 LIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
L+F+Q R ML+++Q+ + S G+ + R+DGTT + R +V++F +FLLT++VG
Sbjct: 757 LLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQSMVDEFNNNPDLHVFLLTTKVG 816
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+DV VYRLMT GT+EEKIY +QI
Sbjct: 817 GLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIEEKIYHRQI 876
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
FK L + +Q + F DL +L SL + G
Sbjct: 877 FKQFLTNKILKDPKQRQTFQLSDLHDLFSLGEDG 910
>gi|115387749|ref|XP_001211380.1| hypothetical protein ATEG_02202 [Aspergillus terreus NIH2624]
gi|114195464|gb|EAU37164.1| hypothetical protein ATEG_02202 [Aspergillus terreus NIH2624]
Length = 1192
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 209/563 (37%), Positives = 310/563 (55%), Gaps = 72/563 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y LPG I +LF +Q+ G++WLW L Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 383 YRLPGDIHPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLT 442
Query: 353 KRALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
K A+VV P T++ W+ E I G+ + + E + +++ +L T+D
Sbjct: 443 KPAIVVCPATVMKQWVTEFHTWWPAFRVSILHTSGSGMVNIRNESR---REEALLSQTWD 499
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAI-------------------WDYMILDEGHLIKNPS 451
R +S L+ + ++ + W ILDEGH I+NP+
Sbjct: 500 -SRASSSGLKAGRRVVKRVVEEGHVLVTTYSGLLSYASLLIPVEWGCAILDEGHKIRNPN 558
Query: 452 TQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGN 511
T E+ + HRII+SGTP+QNNL ELW+LF+F P LG F+ ++E PI +G
Sbjct: 559 TAITIHAKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGG 618
Query: 512 DKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLT 571
+A + + + + A+ L++ I PY L+R K +V +A L KK+E +++ RLT
Sbjct: 619 YANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPKKSEQVLFCRLT 670
Query: 572 SCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLN 629
QRQ Y+AFL S+ + S G L + IL+KIC+HP L +
Sbjct: 671 KLQRQSYKAFLASQEMQSILRGRRQALYGIDILRKICNHPDLQS---------------- 714
Query: 630 PEDAALAEKLAMHIADV--AEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
K + H A AEK S K+ + SLL+ GH L+F+Q R
Sbjct: 715 -------HKFSAHKAAYGGAEK----------SGKMQVVRSLLELWRDTGHKTLLFAQHR 757
Query: 688 KMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLT 746
ML+++++ + S G + R+DGTT + R +V++F + +FLLT++VGGLG+ LT
Sbjct: 758 IMLDILEKFVNSLSGINYRRMDGTTPIAQRQSMVDEFNKDPSLHLFLLTTKVGGLGVNLT 817
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +Q+FK L
Sbjct: 818 GADRVIIYDPDWNPSTDMQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQVFKQFLTN 877
Query: 807 TATEHKEQIRYFSQQDLRELLSL 829
+Q + F DL +L SL
Sbjct: 878 KILRDPKQRQTFQMSDLHDLFSL 900
>gi|328783971|ref|XP_001120586.2| PREDICTED: DNA excision repair protein ERCC-6-like [Apis mellifera]
Length = 1134
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/558 (35%), Positives = 300/558 (53%), Gaps = 61/558 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L+ +Q+ ++WLW LH + GG+LGD+MGLGKT+Q+ FLAGL S L+
Sbjct: 313 FKIPQFIWKKLYKYQKISVQWLWELHLRSLGGLLGDEMGLGKTVQVIAFLAGLDCSELLS 372
Query: 354 ---------RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQYELQYVLQDK 402
+++ P TL+ W+K L + GT +Y L + L+
Sbjct: 373 DGGRFRGLGPTIIICPATLMEQWVKHFHEWWPILRIVVLHQSGTYNGNLEY-LIHSLKSG 431
Query: 403 GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP 462
G+++T+Y S L+ + W Y+ILDEGH I+NP + +K++ E
Sbjct: 432 GIIITSY------SGMLKHKDLLVSNQ------WHYVILDEGHKIRNPQAKVSKAVKEFS 479
Query: 463 SAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRI 522
+ HR++++G+P+QN+LKELW+LF+F P LG F E PI RG +A ++
Sbjct: 480 TPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAGPITRGGYANATPLQEAT 539
Query: 523 GSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL 582
VA LR+ I PY LRR KN+V H +L +KNE +++ LT Q++LY+ +L
Sbjct: 540 ALQVAMMLRDAITPYMLRRTKNDVQHH------VSLPEKNEQVLFCSLTEEQKKLYKKYL 593
Query: 583 NS-----------EIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
S I + L AL+ L+KIC+HP L
Sbjct: 594 RSTDVSFILHEKNNIENGKYRARLLIALSALRKICNHPDLYLYTTP-------------- 639
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
+++ + EK + + S K+ + SLL +GH VL+F+Q R+M++
Sbjct: 640 --IDSDEDIDISDETLEKFGYWKH----SGKMIVVRSLLKIWKKQGHRVLLFTQGRQMMH 693
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+++ I ++ Y +LR+DGTT S R + + F + IFLLT++VGGLG+ LT A+RV
Sbjct: 694 ILESLIQNEQYTYLRMDGTTPMSHRQETIRSFNKDSSYFIFLLTTRVGGLGVNLTGANRV 753
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH 811
++ DP WNP+TD Q+ +RA+RIGQ K+V +YRL+T GT+EEKIY +QIFK L E
Sbjct: 754 VIYDPDWNPATDAQARERAWRIGQNKNVTIYRLITAGTIEEKIYHRQIFKILLSNKVLED 813
Query: 812 KEQIRYFSQQDLRELLSL 829
Q R F DL EL +
Sbjct: 814 PRQRRLFKTNDLVELFNF 831
>gi|322710752|gb|EFZ02326.1| DNA repair protein Rhp26/Rad26, putative [Metarhizium anisopliae
ARSEF 23]
Length = 1162
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 201/561 (35%), Positives = 298/561 (53%), Gaps = 78/561 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
LPG I LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q+ F+A L HS++++R
Sbjct: 387 LPGDIHPSLFGYQKTGVQWLAELYKQNVGGIIGDEMGLGKTVQLIAFIAALHHSKMLERP 446
Query: 355 ALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ------------ 400
+VVAP TLL W+ E L I G+ + Q+E Y ++
Sbjct: 447 VIVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMMNPQFEDDYDVEHYRPVANRSLNA 506
Query: 401 ---------DKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNP 450
DKG VL+TTY ++ + L W Y +LDEGH I+NP
Sbjct: 507 ARSIVRRVVDKGHVLVTTYTGLQTYADELLPVE------------WGYAVLDEGHKIRNP 554
Query: 451 STQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRG 510
+ + + E+ + +R+I+SGTP+QNNL ELW+LF+F P LG F+ ++E+PI +G
Sbjct: 555 NAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRTQFEIPIRQG 614
Query: 511 NDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRL 570
+A + + A+ L+E I Y L+RLK +V +A L +K E +++ +L
Sbjct: 615 GYANASNLQVMTAEKCAEALKETISEYLLQRLKIDV--------AADLPEKTEQVLFCKL 666
Query: 571 TSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
T QR+ YE FL S+ V + + L + IL+KIC+HP LL
Sbjct: 667 TEGQRKAYETFLGSDEVSAILNRRRQSLYGIDILRKICNHPDLL---------------- 710
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK-LIPEGHNVLIFSQTR 687
D +L K + +S K+ LL K +IP GH L+FSQ +
Sbjct: 711 ---DKSLGSKTGYNFGS-----------PKLSAKLELTKDLLQKVMIPNGHKTLLFSQGK 756
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
MLN+I++ + +LR+DG T R +++ F +FL+T++ GGLG LT
Sbjct: 757 LMLNIIEKCMRECNISYLRLDGETPVDQRQPMIDRFNTDLSIHVFLMTTRTGGLGTNLTG 816
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
ADR+I+ DP WNPSTD Q+ +RA+R+GQ K V +YRLMT GT+EEKIY +QIFK +
Sbjct: 817 ADRIIIFDPDWNPSTDLQARERAWRLGQNKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNK 876
Query: 808 ATEHKEQIRYFSQQDLRELLS 828
+ +Q + DL +L S
Sbjct: 877 VLKDPKQRSSYDLSDLYDLFS 897
>gi|322694140|gb|EFY85978.1| DNA repair protein Rhp26/Rad26, putative [Metarhizium acridum CQMa
102]
Length = 1162
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 200/561 (35%), Positives = 301/561 (53%), Gaps = 78/561 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
LPG I LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q+ F+A L HS++++R
Sbjct: 387 LPGDIHPSLFGYQKTGVQWLAELYKQNVGGIIGDEMGLGKTVQLIAFIAALHHSKMLERP 446
Query: 355 ALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQ------------ 400
+VVAP TLL W+ E L I G+ + ++E +Y ++
Sbjct: 447 VIVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMMNPRFEDEYDVEHYRPVANRSLNA 506
Query: 401 ---------DKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNP 450
DKG VL+TTY ++ + L W Y +LDEGH I+NP
Sbjct: 507 ARRIVRRVVDKGHVLVTTYTGLQTYADELLPVE------------WGYAVLDEGHKIRNP 554
Query: 451 STQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRG 510
+ + + E+ + +R+I+SGTP+QNNL ELW+LF+F P LG F+ ++E+PI +G
Sbjct: 555 NAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRTQFEIPIRQG 614
Query: 511 NDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRL 570
+A + + A+ L+E I Y L+RLK +V +A L +K E +++ +L
Sbjct: 615 GYANASNLQVMTAEKCAEALKETIGEYLLQRLKIDV--------AADLPEKTEQVLFCKL 666
Query: 571 TSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
T QR+ YE FL S+ V + + L + IL+KIC+HP LL
Sbjct: 667 TEGQRKAYETFLGSDEVSAILNRRRQSLYGIDILRKICNHPDLL---------------- 710
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK-LIPEGHNVLIFSQTR 687
D +L K+ + +S K+ LL K +IP+GH L+FSQ +
Sbjct: 711 ---DKSLGSKIGYNFGS-----------PKLSAKLELTKDLLQKVMIPKGHKTLLFSQGK 756
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
MLN+I++ + +LR+DG T R +++ F +FL+T++ GGLG LT
Sbjct: 757 LMLNIIEKCMRECNISYLRLDGETPVDQRQPMIDRFNADLSIHVFLMTTRTGGLGTNLTG 816
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
ADR+I+ DP WNPSTD Q+ +RA+R+GQ K V +YRLMT GT+EEKIY +QIFK +
Sbjct: 817 ADRIIIFDPDWNPSTDLQARERAWRLGQNKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNK 876
Query: 808 ATEHKEQIRYFSQQDLRELLS 828
+ +Q + DL +L S
Sbjct: 877 VLKDPKQRSSYDLSDLYDLFS 897
>gi|440291244|gb|ELP84513.1| DNA repair and recombination protein RAD26, putative [Entamoeba
invadens IP1]
Length = 801
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 203/571 (35%), Positives = 303/571 (53%), Gaps = 95/571 (16%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
RS +++ K+ L+ HQR G++W++ L+ QG GGI+GD+MGLGKT+ + FL GL HS
Sbjct: 113 RSGFLIRQKLYEELYEHQRVGVKWMYELYKQGGGGIVGDEMGLGKTLMVLSFLEGL-HST 171
Query: 351 LIKRA-------------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTR 391
L + L++ P TL+SHW+ E + + +F V R
Sbjct: 172 LYAKCTQSKSDVLTTRGEMRVGNILIICPLTLISHWVSE------AHRFVPFFRVIVLHR 225
Query: 392 ------QYELQYVLQ-DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEG 444
Q L+ + Q + +TTYD VRN L +++ Y ILDEG
Sbjct: 226 ALSSSGQDNLELLTQASNCIFVTTYDFVRNKLNDLNRVTYL------------YTILDEG 273
Query: 445 HLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYE 504
H IKNP + + ++ + S +R+I+SG+PIQNNL ELW+LF+F P LG FK+++
Sbjct: 274 HKIKNPKSGISIAIKSLRSENRLILSGSPIQNNLAELWSLFDFVYPGKLGTLPVFKQQFI 333
Query: 505 LPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEM 564
PI G+ A + AK L++ I P+ LRRLK +V TL K E
Sbjct: 334 DPIKFGSYTSASYFQFTAALKCAKALKDTIAPFLLRRLKKDVL--------PTLPNKTEN 385
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLD 622
+V+++L+ QR+LY ++NS V +G L A+ L+K+C+HPLLL K D
Sbjct: 386 VVFVKLSLKQRELYLEYINSFSVTKVINGDTNLLVAIDYLRKVCNHPLLLNKNVEMD--- 442
Query: 623 GMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNI--SCKISFILSLLDKLIPEGHNV 680
H+N+ S K+ +LSLLD E H
Sbjct: 443 ---------------------------------HENVMESAKVKVLLSLLDNWRKEKHKA 469
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
LIF QT++MLN++Q+ + Y FLR+DG A R +++ F D F+LT++VGG
Sbjct: 470 LIFCQTKQMLNILQKVLEYNKYIFLRMDGDVAAGKRSSLIDAFNHDDTINCFILTTRVGG 529
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LG+ LT ADRV++ DP WNP+ D+Q+ +R RIGQ K+V +Y+L+ GT+EE+IY +QI
Sbjct: 530 LGINLTGADRVVLFDPDWNPTVDSQAKERTLRIGQIKNVSIYKLICSGTIEERIYNRQIS 589
Query: 801 KGGLF-KTATEHKEQIR-YFSQQDLRELLSL 829
K + K ++ E +R F +Q ++EL L
Sbjct: 590 KEIISNKILSDQNEVLRKQFKKQIVKELFQL 620
>gi|238492801|ref|XP_002377637.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus flavus
NRRL3357]
gi|220696131|gb|EED52473.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus flavus
NRRL3357]
Length = 1076
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 212/574 (36%), Positives = 312/574 (54%), Gaps = 86/574 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y +PG I +LF +Q+ G++WLW L Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 285 YRIPGDIYPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLHYSKKLT 344
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGL----------------SAKIRE 382
K ++V P T++ W+ E + G+ + R
Sbjct: 345 KPVIIVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSREDALLSQTWDSRR 404
Query: 383 YFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
G R+ ++ V+++ VL+TTY ++ + L I E W +LD
Sbjct: 405 SLGGLKAGRKV-VKRVVEEGHVLVTTYSGLQTYTPLL-----IPVE-------WGCAVLD 451
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
EGH I+NP+T E+ + HRII+SGTP+QNNL ELW+LF+F P LG F+ +
Sbjct: 452 EGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQ 511
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
+E PI +G +A + + + + A+ L++ I PY L+R K +V +A L KK+
Sbjct: 512 FEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKVDV--------AADLPKKS 563
Query: 563 EMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDV 620
E +++ +LT QRQ Y++FL SE + S G L + IL+KIC+HP L +
Sbjct: 564 EQVLFCKLTKLQRQAYKSFLGSEEMQSILRGRRQVLYGVDILRKICNHPDLQS------- 616
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
KL H A D S K+ + SLL+ GH
Sbjct: 617 ----------------HKLTSHKAGYGNPDK--------SGKMQVVKSLLELWKDTGHKT 652
Query: 681 LIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
L+F+Q R ML+++Q+ + S G+ + R+DGTT + R +V++F +FLLT++VG
Sbjct: 653 LLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQSMVDEFNNNPDLHVFLLTTKVG 712
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+DV VYRLMT GT+EEKIY +QI
Sbjct: 713 GLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIEEKIYHRQI 772
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
FK L + +Q + F DL +L SL + G
Sbjct: 773 FKQFLTNKILKDPKQRQTFQLSDLHDLFSLGEDG 806
>gi|453082990|gb|EMF11036.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 1270
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 199/568 (35%), Positives = 304/568 (53%), Gaps = 81/568 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLI 352
+ +PG + LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT Q+ FLAGL +S ++
Sbjct: 453 FRVPGDVYPSLFDYQKTGVQWLWELYSQQVGGIVGDEMGLGKTCQVISFLAGLHYSGKIT 512
Query: 353 KRALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQY------------- 397
K +V+ P TLL W+ E L I G+ + + E ++
Sbjct: 513 KPIIVLCPATLLKQWVDEFHRWWPPLRVTILHSSGSGMLDVKREARFEDDLDDDRRKKSR 572
Query: 398 -------------VLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEG 444
V+QD VL+TTY + N + L + W+Y +LDEG
Sbjct: 573 GRPNPSVRNVIDRVVQDGHVLVTTYAGLVNYADQLLPVN------------WEYCVLDEG 620
Query: 445 HLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYE 504
H I+NP+ + EI + +R+I+SGTP+QNNL+ELW LF+F P LG FK ++
Sbjct: 621 HKIRNPNAEITIFCKEIMTHNRVILSGTPMQNNLEELWTLFDFVFPMRLGTLVNFKNQFA 680
Query: 505 LPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEM 564
+PI +G +A + + A+ L++ I PY L+R K +V + L KK E
Sbjct: 681 IPIKQGGYANASNLQVETAMKCAETLKDAISPYLLQRFKADV--------ATDLPKKIER 732
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLD 622
+++ +LT QR Y+ FL+SE + S +G L + IL+KIC+HP L+ +
Sbjct: 733 VLFCKLTKLQRDAYQWFLDSEDMKSIMNGKRQALYGIDILRKICNHPDLVEHKT------ 786
Query: 623 GMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLI 682
+++K ++ S K+ + LL +GH L+
Sbjct: 787 -----------------------LSKKAGYEYGIGTKSGKMQVVKELLKIWKDKGHKTLL 823
Query: 683 FSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
F+Q R ML++++ IGS G + R+DGTT R +VN+F +FLLT++VGGL
Sbjct: 824 FAQHRIMLDILERFIGSMSGINYRRMDGTTDIKHRQDLVNEFNHDPDLHVFLLTTKVGGL 883
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
G+ LT A+R+I+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +Q+FK
Sbjct: 884 GVNLTGANRIIIYDPDWNPSTDVQARERAWRLGQKREVEIYRLMTAGTIEEKIYHRQLFK 943
Query: 802 GGLFKTATEHKEQIRYFSQQDLRELLSL 829
L +Q + F +DL +L +L
Sbjct: 944 LFLTNKILRDPKQRQNFQLKDLHDLFTL 971
>gi|189204870|ref|XP_001938770.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985869|gb|EDU51357.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1246
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 202/571 (35%), Positives = 307/571 (53%), Gaps = 84/571 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
+ +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q G +AGL +S+ L
Sbjct: 406 FRIPGDIYPALFDYQKTGVQWLWELYSQNVGGIIGDEMGLGKTIQAIGLVAGLHYSKKLT 465
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGL-----------SAKIREY--FG 385
K +VV P T++ W+ E + G+ ++R+Y +
Sbjct: 466 KPVIVVCPATVMKQWVNEFHRWWPALRVSILHTSGSGMLDTRREDRLEQEMELRKYGDYD 525
Query: 386 TCV----KTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMIL 441
T + K + L+ V +D VL+TTY ++ ++ L I E W+ IL
Sbjct: 526 TTLTGAGKAAKKVLEKVKRDGHVLVTTYSGLQTYAEFL-----IPTE-------WECAIL 573
Query: 442 DEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKE 501
DEGH I+NP+T E+ + +RII+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 574 DEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRN 633
Query: 502 KYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKK 561
++E PI RG +A + E A+ L++ + PY L+R K +V + L +K
Sbjct: 634 QFEFPIKRGGYANASNLEFETAVQCAETLKDAVSPYLLQRFKVDV--------ATDLPQK 685
Query: 562 NEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAED 619
E +++ +LT QRQ YEAFL SE + S +G L + L+KIC+HP L +
Sbjct: 686 KEQVLFCKLTRQQRQAYEAFLASEDMKSIANGKRQMLFGVDFLRKICNHPDLTEHKT--- 742
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
+++K + + N S K+ + LL GH
Sbjct: 743 --------------------------LSKKPGYDYGNPNRSGKMQVVKELLSLWKKGGHK 776
Query: 680 VLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
L+F+Q R ML+++Q+ I + R+DG T DR +V++F +FLLT++V
Sbjct: 777 TLLFAQHRIMLDILQKFISQLPDINWRRMDGDTPIKDRQNLVDEFNNNPDLHVFLLTTKV 836
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLG+ LT A+RVI+ DP WNPSTD Q+ +R++R+GQK++V +YRLM+ GT+EEKIY +Q
Sbjct: 837 GGLGVNLTGANRVIIYDPDWNPSTDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQ 896
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IFK L + +Q + F DL +L +L
Sbjct: 897 IFKQFLTNKVLKDPKQRQTFQMSDLHDLFTL 927
>gi|83774735|dbj|BAE64858.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 977
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 211/574 (36%), Positives = 310/574 (54%), Gaps = 86/574 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LI 352
Y +PG I +LF +Q+ G++WLW L Q GGI+GD+MGLGKT+Q+ FLAGL +S+ L
Sbjct: 280 YRIPGDIYPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLHYSKKLT 339
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKI------------------------------RE 382
K ++V P T++ W+ E ++ R
Sbjct: 340 KPVIIVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSREDALLSQTWDSRR 399
Query: 383 YFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
G R+ ++ V+++ VL+TTY ++ + L I E W +LD
Sbjct: 400 SLGGLKAGRKV-VKRVVEEGHVLVTTYSGLQTYTPLL-----IPVE-------WGCAVLD 446
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
EGH I+NP+T E+ + HRII+SGTP+QNNL ELW+LF+F P LG F+ +
Sbjct: 447 EGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQ 506
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
+E PI +G +A + + + + A+ L++ I PY L+R K +V +A L KK+
Sbjct: 507 FEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPKKS 558
Query: 563 EMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDV 620
E +++ +LT QRQ Y++FL SE + S G L + IL+KIC+HP L +
Sbjct: 559 EQVLFCKLTKLQRQAYKSFLGSEEMQSILRGRRQVLYGVDILRKICNHPDLQS------- 611
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
KL H A D S K+ + SLL+ GH
Sbjct: 612 ----------------HKLTSHKAGYGNPDK--------SGKMQVVKSLLELWKDTGHKT 647
Query: 681 LIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
L+F+Q R ML+++Q+ + S G+ + R+DGTT + R +V++F +FLLT++VG
Sbjct: 648 LLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQSMVDEFNNNPDLHVFLLTTKVG 707
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+DV VYRLMT GT+EEKIY +QI
Sbjct: 708 GLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIEEKIYHRQI 767
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
FK L + +Q + F DL +L SL + G
Sbjct: 768 FKQFLTNKILKDPKQRQTFQLSDLHDLFSLGEDG 801
>gi|302308020|ref|NP_984796.2| AEL065Cp [Ashbya gossypii ATCC 10895]
gi|299789257|gb|AAS52620.2| AEL065Cp [Ashbya gossypii ATCC 10895]
gi|374108017|gb|AEY96924.1| FAEL065Cp [Ashbya gossypii FDAG1]
Length = 1025
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 209/587 (35%), Positives = 305/587 (51%), Gaps = 103/587 (17%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLI 352
+ +P I + LF +Q+ ++WL+ LH Q GGI+GD+MGLGKT+QI FLA L HS +L
Sbjct: 253 FKIPADIFDKLFSYQKTCVQWLYELHQQNCGGIVGDEMGLGKTIQIVSFLASLHHSGKLK 312
Query: 353 KRALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQ------------------ 392
LVV P T++ W E A I G + TR+
Sbjct: 313 GPVLVVCPATVMKQWCSEFQTWWPPFRAVILHSIGAGMITRKKMTEEQLEELLMRDESNE 372
Query: 393 --YE---------------------LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEA 429
YE +Q V+ D +L+TTY ++ +S L +
Sbjct: 373 FSYEQYANLGRTKKQLEARRGIESLVQKVVDDGHILITTYLGLQIHSDLLLHVN------ 426
Query: 430 GDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCC 489
WDY +LDEGH I+NP + + + + HRII+SGTPIQNNL ELW+LF+F
Sbjct: 427 ------WDYAVLDEGHKIRNPDAGISLTCKRLRTPHRIILSGTPIQNNLTELWSLFDFIF 480
Query: 490 PELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHE 549
P LG F++++ PI G +A + + + G A LR+ I PY LRR+KN+V
Sbjct: 481 PGKLGTLPVFQQQFANPINAGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKNDV--- 537
Query: 550 DDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICD 607
+ L KKNE +++ ++T Q++ Y FLNSE ++ +G L + IL+KIC+
Sbjct: 538 -----AKDLPKKNEFVLFCKMTQFQKEKYLQFLNSEDMIKIKNGRRQVLYGIDILRKICN 592
Query: 608 HPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFIL 667
HP LL + D S +P S K++ I
Sbjct: 593 HPDLLER----DFRKHEPSFGDPRR---------------------------SGKMTVIK 621
Query: 668 SLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK-----GYKFLRIDGTTKASDRVKIVND 722
LL +GH L+F+Q+R+ML++++ I K G ++LR+DGTT + R +V+
Sbjct: 622 QLLLTWKKQGHKALLFTQSRQMLDILEAYISHKDPELAGLQYLRMDGTTNIAHRQALVDR 681
Query: 723 FQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVY 782
F G +FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK+DV +Y
Sbjct: 682 FNNGPYH-LFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDLQARERAWRIGQKRDVTIY 740
Query: 783 RLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
LM G++EEKIY +QIFK L +Q R+F +L +L S
Sbjct: 741 LLMVAGSIEEKIYHRQIFKQFLTNKVLSDPKQKRFFKMNELHDLFSF 787
>gi|350639251|gb|EHA27605.1| hypothetical protein ASPNIDRAFT_184433 [Aspergillus niger ATCC
1015]
Length = 1179
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 209/576 (36%), Positives = 309/576 (53%), Gaps = 87/576 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +PG I +LF +Q+ G++WLW L Q GGI+GD+MGLGKT+Q+ FLAGL +S+ +
Sbjct: 395 YRIPGDIHPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLHYSKKLT 454
Query: 354 R-ALVVAPKTLLSHWIKE--------------------------------LTAVGLSAKI 380
R +VV P T++ W+ E L + +A
Sbjct: 455 RPVIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSREDALLSQAWNASS 514
Query: 381 REYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
+ +K + ++ V+++ VL+TTY ++ + S I E W +
Sbjct: 515 TRGMPSGLKAARKVVKRVVEEGHVLVTTYSGLQTYA-----SLVIPIE-------WGCAV 562
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP+T E+ + HRII+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 563 LDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 622
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
++E PI +G +A + + + + A+ L++ I PY L+R K +V +A L K
Sbjct: 623 NQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPK 674
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAE 618
K+E +++ +LT QRQ YEAFL SE + S +G L + IL+KIC+HP L +
Sbjct: 675 KSEQVLFCKLTKPQRQAYEAFLGSEEMKSILNGRRQVLFGVDILRKICNHPDLQNHKLMS 734
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
G S + S K+ + SLL+ GH
Sbjct: 735 STT-GYGS------------------------------GSKSGKMQVVKSLLELWKDTGH 763
Query: 679 NVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+F+Q R ML+++++ + S G+ + R+DGTT R +V++F +FLLT++
Sbjct: 764 KTLLFTQHRIMLDILEKFVNSLSGFNYRRMDGTTPIQHRQAMVDEFNNDPSLHVFLLTTK 823
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+DV VYRLMT GT+EEKIY +
Sbjct: 824 VGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIEEKIYHR 883
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
QIFK L +Q + F DL +L SL +G
Sbjct: 884 QIFKQFLTNKILRDPKQRQTFQLSDLHDLFSLGDEG 919
>gi|317034915|ref|XP_001400735.2| DNA repair protein Rhp26/Rad26 [Aspergillus niger CBS 513.88]
Length = 1214
Score = 332 bits (851), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 209/576 (36%), Positives = 309/576 (53%), Gaps = 87/576 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +PG I +LF +Q+ G++WLW L Q GGI+GD+MGLGKT+Q+ FLAGL +S+ +
Sbjct: 407 YRIPGDIHPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLHYSKKLT 466
Query: 354 R-ALVVAPKTLLSHWIKE--------------------------------LTAVGLSAKI 380
R +VV P T++ W+ E L + +A
Sbjct: 467 RPVIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSREDALLSQAWNASS 526
Query: 381 REYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
+ +K + ++ V+++ VL+TTY ++ + S I E W +
Sbjct: 527 TRGMPSGLKAARKVVKRVVEEGHVLVTTYSGLQTYA-----SLVIPIE-------WGCAV 574
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP+T E+ + HRII+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 575 LDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 634
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
++E PI +G +A + + + + A+ L++ I PY L+R K +V +A L K
Sbjct: 635 NQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPK 686
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAE 618
K+E +++ +LT QRQ YEAFL SE + S +G L + IL+KIC+HP L +
Sbjct: 687 KSEQVLFCKLTKPQRQAYEAFLGSEEMKSILNGRRQVLFGVDILRKICNHPDLQNHKLMS 746
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
G S + S K+ + SLL+ GH
Sbjct: 747 STT-GYGS------------------------------GSKSGKMQVVKSLLELWKDTGH 775
Query: 679 NVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+F+Q R ML+++++ + S G+ + R+DGTT R +V++F +FLLT++
Sbjct: 776 KTLLFTQHRIMLDILEKFVNSLSGFSYRRMDGTTPIQHRQAMVDEFNNDPSLHVFLLTTK 835
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+DV VYRLMT GT+EEKIY +
Sbjct: 836 VGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIEEKIYHR 895
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
QIFK L +Q + F DL +L SL +G
Sbjct: 896 QIFKQFLTNKILRDPKQRQTFQLSDLHDLFSLGDEG 931
>gi|290989143|ref|XP_002677202.1| predicted protein [Naegleria gruberi]
gi|284090808|gb|EFC44458.1| predicted protein [Naegleria gruberi]
Length = 1068
Score = 332 bits (851), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 227/681 (33%), Positives = 346/681 (50%), Gaps = 102/681 (14%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLH--CQGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
+++ I L+ HQ+ GL+WL H + +GGIL D+MGLGKT+QI + GLF S
Sbjct: 335 SFVTSATIFEKLYHHQQIGLKWLAERHLDTRFRGGILSDEMGLGKTIQISALIHGLFLSE 394
Query: 351 LIKRALVVAPKTLLSHWIKELTA--------------VGLSAKIREYFGTCVKTRQYELQ 396
R L++ P +++ +W +EL A VG + + + V Q+ +
Sbjct: 395 KASRVLIICPNSVIGNWQRELLAWTDNCLQGIVVFHQVGGNKSGNKKRMSLVN--QFN-R 451
Query: 397 YVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
Y V+++TY + N+ L+ E DD + D ++LDE H IKN + +
Sbjct: 452 YANNGGAVMISTYQTISNHVDFLK-------EQFSDDLLLDSIVLDEAHKIKNRDAKCSM 504
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPE-LLGDNKWFKEKYELPILRGNDKHA 515
+L +PS R ++GTPI N L EL+AL+++ E LLG + F E Y +PI + A
Sbjct: 505 ALQTLPSHSRFALTGTPIMNRLAELYALYSWIFGETLLGSEREFNESYTIPINHSTKRDA 564
Query: 516 LDREKRIGSAVAKELRERIQPYFLRRLK-------NEVFHEDDVTSSATLSKKNEMIVWL 568
EK +G+ A LRE I+PY + R K N+++ +D +++A + +KN+++VW
Sbjct: 565 TPFEKLMGNNAADSLRETIKPYMMMRTKQSVLSIDNQLYKNEDQSTTAKIGQKNDLVVWC 624
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDGS--PLAALTILKKICDHPLLLT------------- 613
LT Q Y+ +L S+ V + + PL + ILK+ICDH LL T
Sbjct: 625 SLTEDQINWYKDYLLSDQVKQVLNRTLNPLVGIIILKQICDHTLLCTGYDELLKQKKEEL 684
Query: 614 -----------KRAAEDVLDGMDSMLNPEDA-----------------ALAEKLAMHIAD 645
+++ ED +D + L E A AL KL +
Sbjct: 685 KNEMMEQDENEEKSEEDFIDDSEDNLLSEAALPSMTLDMSDLDEKRQRALQRKLRQAQEE 744
Query: 646 VAEKDDFQEQHDNI---SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGY 702
+ +K +E +NI S K I L++K I +GH VLIFSQ +ML++I + S
Sbjct: 745 MIKKRIREEPIENILAKSTKAQMIKQLVEKSIDDGHKVLIFSQYTRMLDIIGVILKSMNI 804
Query: 703 KFLRIDGT-TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
K+ RIDG+ TK +R+ +V+ F + FLL+SQ GG+GL LT A RVI+V+P +NPS
Sbjct: 805 KYNRIDGSVTKYQERLSLVDSFNQKKNIKCFLLSSQAGGVGLNLTAASRVIIVEPNFNPS 864
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF-----------------KGGL 804
D Q++DRAYRIGQ+++V+VYRL+ T+EE IY++ +F K +
Sbjct: 865 IDEQAIDRAYRIGQRQNVIVYRLICSSTIEEYIYKRLVFLYDCINYSIINTNRQVSKTTV 924
Query: 805 FKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQ-F 863
+TA Q RY DL E+ +L S T Q+ ++ H + LE HI+ F
Sbjct: 925 SRTAVIASNQYRYLRHSDLLEMFTLGDTT--KSDTCQRFNKIHEKDRRDADGLEEHIEKF 982
Query: 864 LDTL-GIAGVSHHSLLFSKTA 883
L L + GVS H +LF A
Sbjct: 983 LKGLPSVVGVSDHDVLFCNEA 1003
>gi|134081405|emb|CAK46446.1| unnamed protein product [Aspergillus niger]
Length = 1223
Score = 332 bits (850), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 209/576 (36%), Positives = 309/576 (53%), Gaps = 87/576 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +PG I +LF +Q+ G++WLW L Q GGI+GD+MGLGKT+Q+ FLAGL +S+ +
Sbjct: 416 YRIPGDIHPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLHYSKKLT 475
Query: 354 R-ALVVAPKTLLSHWIKE--------------------------------LTAVGLSAKI 380
R +VV P T++ W+ E L + +A
Sbjct: 476 RPVIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSREDALLSQAWNASS 535
Query: 381 REYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
+ +K + ++ V+++ VL+TTY ++ + S I E W +
Sbjct: 536 TRGMPSGLKAARKVVKRVVEEGHVLVTTYSGLQTYA-----SLVIPIE-------WGCAV 583
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
LDEGH I+NP+T E+ + HRII+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 584 LDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 643
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
++E PI +G +A + + + + A+ L++ I PY L+R K +V +A L K
Sbjct: 644 NQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------AADLPK 695
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAE 618
K+E +++ +LT QRQ YEAFL SE + S +G L + IL+KIC+HP L +
Sbjct: 696 KSEQVLFCKLTKPQRQAYEAFLGSEEMKSILNGRRQVLFGVDILRKICNHPDLQNHKLMS 755
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
G S + S K+ + SLL+ GH
Sbjct: 756 STT-GYGS------------------------------GSKSGKMQVVKSLLELWKDTGH 784
Query: 679 NVLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
L+F+Q R ML+++++ + S G+ + R+DGTT R +V++F +FLLT++
Sbjct: 785 KTLLFTQHRIMLDILEKFVNSLSGFSYRRMDGTTPIQHRQAMVDEFNNDPSLHVFLLTTK 844
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+DV VYRLMT GT+EEKIY +
Sbjct: 845 VGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIEEKIYHR 904
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
QIFK L +Q + F DL +L SL +G
Sbjct: 905 QIFKQFLTNKILRDPKQRQTFQLSDLHDLFSLGDEG 940
>gi|332025493|gb|EGI65656.1| DNA excision repair protein ERCC-6 [Acromyrmex echinatior]
Length = 1020
Score = 332 bits (850), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 198/563 (35%), Positives = 304/563 (53%), Gaps = 71/563 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGL------- 346
+ +P I L+ +Q+ ++WLW LH + GG+LGD+MGLGKT++I FLAGL
Sbjct: 227 FKMPQCIWEKLYRYQKVAVKWLWELHSRKLGGLLGDEMGLGKTVEIIAFLAGLDCSELLS 286
Query: 347 FHSRL--IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQ-------YELQY 397
+H R + ++V P TL+ W+K + +F V L
Sbjct: 287 YHGRYRGLGPTIIVCPATLMEQWVKHF------HEWWPFFRVVVLHHSGGYNGDPESLIE 340
Query: 398 VLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKS 457
LQ G+L+T+Y+ V + L S W Y+ILDEGH I+NP + +++
Sbjct: 341 SLQIGGILITSYNGVLKHKDLLVSSQ------------WHYVILDEGHKIRNPQAKVSRA 388
Query: 458 LLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALD 517
+ + HR++++G+P+QN+LKELW+LF+F P LG F E +PI RG +A
Sbjct: 389 VKRFSTPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPVFLEHCAMPITRGGYTNATP 448
Query: 518 REKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQL 577
++ +A L+ I PY LRR K +V H TL +KNE +++ LT Q++L
Sbjct: 449 LQEATALQIATMLKNTITPYMLRRTKTDVKHH------LTLPEKNEQVLFCSLTDEQKKL 502
Query: 578 YEAFLNSE---IVLSA--------FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
Y+ +L S+ VL + L AL+ L+KIC+HP L +D
Sbjct: 503 YKKYLCSDDVSFVLHERNYCSSGRYRARFLIALSALRKICNHPDLFLYTREQD------- 555
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQT 686
+ ED L++ + EK + ++ + K++ + SLL +GH VL+F+Q
Sbjct: 556 --SDEDIDLSD-------EQIEKFGYYKR----AGKMTVVRSLLKIWQKQGHRVLLFTQG 602
Query: 687 RKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLT 746
R+M+++++ + + Y +LR+DGTT S R + + F +FLLT++VGGLG+ LT
Sbjct: 603 RQMMHILESLLQREKYIYLRMDGTTAMSQRQQTIQKFNNDSSYFVFLLTTRVGGLGINLT 662
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
A+RV++ DP WNP+TD Q+ +RA+RIGQ K V VYRL+T GT+EEKIY +QIFK L
Sbjct: 663 GANRVVIYDPDWNPATDAQARERAWRIGQNKQVTVYRLITAGTIEEKIYHRQIFKLLLSN 722
Query: 807 TATEHKEQIRYFSQQDLRELLSL 829
+ Q + F DL EL +L
Sbjct: 723 KVLDEPRQRQLFKPTDLVELFNL 745
>gi|390359838|ref|XP_780898.3| PREDICTED: DNA excision repair protein ERCC-6, partial
[Strongylocentrotus purpuratus]
Length = 1004
Score = 331 bits (849), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 199/560 (35%), Positives = 309/560 (55%), Gaps = 64/560 (11%)
Query: 287 LSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGL 346
L+G R T LP K F +Q+ G++WLW LH Q GGILG +MGLGKT+++ FLAGL
Sbjct: 37 LAGLR-TSALPSKG----FRYQKIGVKWLWELHRQKAGGILGHEMGLGKTIEMIAFLAGL 91
Query: 347 ---------FHSRLIKRALVVAPKTLLSHWIKELTAV--GLSAKIREYFGTCVKTRQYEL 395
F R + L+V P T+L W+KE + I G+ R+ +
Sbjct: 92 RTSALPSKGFSYRGLGPVLIVCPATVLHQWLKEFHTWYPEIRVAILHESGSHSGKRESLV 151
Query: 396 QYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRA 455
+ + GVL+T++ VR LR + W Y+ILDEGH I+NP +
Sbjct: 152 RDMASSHGVLITSFSTVR-----LRQEMLLRYN-------WHYVILDEGHKIRNPDAEVT 199
Query: 456 KSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHA 515
+ + + HR+I++G+P+QNNL+ELW+L +F P LG F +++ +PI++G +A
Sbjct: 200 LACKQFRTPHRLILTGSPMQNNLRELWSLIDFVFPGKLGTLPVFMQQFSVPIVQGGYANA 259
Query: 516 LDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQR 575
+ + A LR+ + PY LRRLK DV + L KNE +++ LT Q
Sbjct: 260 SKVQVQTAYKCACILRDSVSPYLLRRLKA------DVKQALQLPSKNEQVLFCHLTEEQT 313
Query: 576 QLYEAFLNSE---IVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
Q+YE +L S+ ++L + A L L+KIC+HP D++ G + + ++
Sbjct: 314 QVYEEYLASKECNLILRG-EYKVFAGLITLRKICNHP---------DLVSGGPRIFSHQN 363
Query: 633 AALAEKLAMHIADVAEKDDFQEQ---HDNISCKISFILSLLDKLIPEGHNVLIFSQTRKM 689
++++D +EQ + + K+ + SLL + H VL+FSQ+++M
Sbjct: 364 -------------LSDEDLTEEQRYGYYKRAGKMIVVESLLKLWKEQNHRVLLFSQSKQM 410
Query: 690 LNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKAD 749
L+++++ + + Y ++R+DGTT S R ++ F +FLLT++VGGLG+ LT A+
Sbjct: 411 LDIMEDFVKDR-YSYMRMDGTTTISSRQPLITKFNSDPRIFLFLLTTRVGGLGVNLTGAN 469
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
RVI+ DP WNPSTD Q+ +R++RIGQ K V +YRL+T G++EEKIY +QIFK L
Sbjct: 470 RVIIYDPDWNPSTDTQARERSWRIGQTKQVTIYRLLTAGSIEEKIYHRQIFKTFLTNRVL 529
Query: 810 EHKEQIRYFSQQDLRELLSL 829
+ Q R+F DL EL +L
Sbjct: 530 KDPRQRRFFKSNDLFELFTL 549
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
+Q+ G++WLW LH Q GGILGD+MGLGKT+++ FLAGL S L
Sbjct: 1 YQKIGVKWLWELHRQKAGGILGDEMGLGKTIEMIAFLAGLRTSAL 45
>gi|451996821|gb|EMD89287.1| hypothetical protein COCHEDRAFT_1180734 [Cochliobolus
heterostrophus C5]
Length = 1221
Score = 331 bits (848), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 202/571 (35%), Positives = 307/571 (53%), Gaps = 84/571 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI- 352
+ +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q F+AGL +S+L+
Sbjct: 389 FRIPGDIYPALFDYQKTGVQWLWELYSQNVGGIIGDEMGLGKTIQAVSFVAGLHYSKLLT 448
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGL-----------SAKIREY--FG 385
K +VV P T++ W+ E + G+ ++R Y +
Sbjct: 449 KPVIVVCPATVMKQWVNEFHRWWPALRVSILHTSGSGMLDTRREDRIEREMELRNYGDYD 508
Query: 386 TCV----KTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMIL 441
T + K + L+ V +D VL+TTY ++ ++ L I E W+ +L
Sbjct: 509 TTLTGAGKAAKKILEKVKRDGHVLVTTYSGLQTYAEFL-----IPTE-------WECAVL 556
Query: 442 DEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKE 501
DEGH I+NP+T E+ + +RII+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 557 DEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRN 616
Query: 502 KYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKK 561
++E PI RG +A + E A+ L++ + PY L+R K +V + L +K
Sbjct: 617 QFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKADV--------ATDLPQK 668
Query: 562 NEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAED 619
E +++ +LT QRQ YE+FL SE + S +G L + L+KIC+HP L
Sbjct: 669 KEQVLFCKLTKQQRQAYESFLASEDMRSIANGKRQMLYGVDYLRKICNHPDLT------- 721
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
E L++K + ++ S K+ + LL GH
Sbjct: 722 -----------EHKTLSKKPGYDYGNASK-----------SGKMQVVKELLSLWKKGGHK 759
Query: 680 VLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
L+F+Q R ML+++Q+ I + R+DG T DR +V++F +FLLT++V
Sbjct: 760 TLLFAQHRIMLDILQKFISQLPDINWRRMDGETPIKDRQNMVDEFNTDPNLHVFLLTTKV 819
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLG+ LT A+RVI+ DP WNPSTD Q+ +R++R+GQK++V +YRLM+ GT+EEKIY +Q
Sbjct: 820 GGLGVNLTGANRVIIYDPDWNPSTDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQ 879
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IFK L + +Q + F DL +L SL
Sbjct: 880 IFKQFLTNKVLKDPKQRQTFQMSDLHDLFSL 910
>gi|366999540|ref|XP_003684506.1| hypothetical protein TPHA_0B04000 [Tetrapisispora phaffii CBS 4417]
gi|357522802|emb|CCE62072.1| hypothetical protein TPHA_0B04000 [Tetrapisispora phaffii CBS 4417]
Length = 1069
Score = 330 bits (846), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 307/591 (51%), Gaps = 107/591 (18%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLI 352
+ +PG+I ++LF +Q+ ++WL+ L+ Q GGILGD+MGLGKT+QI +LA L HS RL
Sbjct: 288 FKIPGEIFSLLFNYQKTCIQWLYELNKQNCGGILGDEMGLGKTIQIIAYLASLHHSDRLN 347
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGLSAKIREYFGTCVKTRQY----- 393
L+V P T++ W E G+S +E + + Q+
Sbjct: 348 GPVLIVCPATVMKQWCNEFHHWWPPLRTVIIHQIGAGMSRNRKEEDMSDSELEQFIMNSN 407
Query: 394 --ELQY--------------------------VLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
E Y V++D +L+TTY +R +S L
Sbjct: 408 PDEYSYEDMKDHSSRTKSQIKLKSNIVNLIDKVIKDGHILITTYVGLRVHSDKLL----- 462
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALF 485
D W +ILDEGH I+NP+++ A + ++ + +RII+SGTPIQNNL ELW+LF
Sbjct: 463 -------DVNWSNVILDEGHKIRNPNSEIALTCKKLRTPNRIILSGTPIQNNLNELWSLF 515
Query: 486 NFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNE 545
+F P LG F++++ +PI G +A + + + G A LR+ I PY LRR+K +
Sbjct: 516 DFIYPGKLGTLPVFQQQFVIPINMGGYANATNVQVQAGYKCATALRDMISPYLLRRVKAD 575
Query: 546 VFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILK 603
V + L K EM+++ +LT QR Y FLNS+ + G L + IL+
Sbjct: 576 V--------AKDLPTKKEMVLFCKLTMYQRSKYLEFLNSKELEQIQKGKRQVLFGIDILR 627
Query: 604 KICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKI 663
KIC+HP LL + ++L D S K+
Sbjct: 628 KICNHPDLLERDN--------------------KRLEKSYGDAKR-----------SGKM 656
Query: 664 SFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK-----GYKFLRIDGTTKASDRVK 718
+ LL +GH LIF+QT++ML +++E I K KFLR+DG+T S R
Sbjct: 657 QVVKQLLLLWKKQGHKALIFTQTKQMLEILEEFISFKDDALNNIKFLRMDGSTNISQRQS 716
Query: 719 IVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKD 778
+V+ F D +FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++
Sbjct: 717 LVDQFNNEDF-DLFLLTTRVGGLGINLTGANRIIIFDPDWNPSTDMQARERAWRIGQKRE 775
Query: 779 VVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
V +YRLM GT+EEKIY +QIFK + +Q R+F +L L +L
Sbjct: 776 VSIYRLMVTGTIEEKIYHRQIFKQFIANKILSDPKQKRFFKMNELHNLFTL 826
>gi|390358636|ref|XP_781405.3| PREDICTED: DNA excision repair protein ERCC-6-like
[Strongylocentrotus purpuratus]
Length = 575
Score = 330 bits (845), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 194/483 (40%), Positives = 282/483 (58%), Gaps = 47/483 (9%)
Query: 302 NMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPK 361
N L+ +Q+E L W W LH + KGGILGDDMGLGKT+Q+ FL+GLF ++ L+V P
Sbjct: 107 NRLYEYQKESLLWFWRLHRKMKGGILGDDMGLGKTVQVVAFLSGLFDMEQVENVLIVVPV 166
Query: 362 TLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRG 421
L+ +W +E + + G K R+ L+ V + GVL+ +Y +V + +
Sbjct: 167 ALVINWEREFKNWAPGIGVHTFHGASKKERERLLERVQRRGGVLMVSYGLVMTCWEQI-- 224
Query: 422 SSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKEL 481
+ +D +WDY++LDEGH IKNP T+ K+ I + HR I++GTPIQNNLKEL
Sbjct: 225 -----NHYRGNDFVWDYVMLDEGHKIKNP-TKTTKAANAIAAKHRFILTGTPIQNNLKEL 278
Query: 482 WALFNFCC-PELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLR 540
W+LFNF LLG + FK +Y+ PI R ++ A EK +G+ +A+ LR I PYFLR
Sbjct: 279 WSLFNFVTHGTLLGTLQTFKSEYDNPITRAREQDATASEKLLGNEMAESLRLLIAPYFLR 338
Query: 541 RLKNEVF-------HEDDVTSSA---------------TLSKKNEMIVWLRLTSCQRQLY 578
R K +V + D S A +L++KN++IVWL LT Q Q+Y
Sbjct: 339 RTKADVLKNKKEDSEQGDGGSEASGSTRGSLSPETVIPSLTRKNDLIVWLSLTETQIQIY 398
Query: 579 EAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDV-----LDGMDSMLNPE 631
+ F++ + V L SPLA LT+LKKICDHP LL+ RA + +G D +P
Sbjct: 399 KDFISLDRVKELLMTKRSPLAELTVLKKICDHPRLLSNRACRQLGLQMSQEGYDENDDPS 458
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
+ A A + ++E+ F E S K+ F++ LL L E H L+FSQ+RKML+
Sbjct: 459 EMECA---ANSVHTISEETLFLE-----SGKLQFLVKLLTNLREEKHRCLVFSQSRKMLD 510
Query: 692 LIQESIGSKGYKFLRIDGTT-KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADR 750
+I++ + ++G+K +R+DGT K SDR ++ FQ +FLLT+QVGG+GLTLT A+R
Sbjct: 511 IIEKILRARGFKLMRLDGTIKKMSDREDRISRFQRDYSYSVFLLTTQVGGVGLTLTGANR 570
Query: 751 VIV 753
V++
Sbjct: 571 VVI 573
>gi|290974011|ref|XP_002669740.1| predicted protein [Naegleria gruberi]
gi|284083291|gb|EFC36996.1| predicted protein [Naegleria gruberi]
Length = 1143
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 215/614 (35%), Positives = 335/614 (54%), Gaps = 61/614 (9%)
Query: 304 LFPHQREGLRWLWSLHCQGK--GGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPK 361
L+ Q+EG++WL + K GGIL D+MGLGKT+Q+ FL GL S+ +R L++AP
Sbjct: 261 LYSFQKEGIKWLNTRFNADKYRGGILADEMGLGKTVQVSAFLGGLAQSK-TRRYLIIAPL 319
Query: 362 TLLSHWIKELTAVGLSAKIREYFGTCVK------TRQYELQYVLQDKGVLLTTYDIVRNN 415
++L W EL + K + K R + Q ++TT+ +
Sbjct: 320 SVLQTWASELDKWAPNIKTFVFHNLSSKEQYNSMARDFHGCAKQQKSAAIITTFRTLVTY 379
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
+ +L +S + + +D I+DE H IKN T +K+L +I S + ++GTPI
Sbjct: 380 TVTL--ASLCAKQE------FDITIVDEAHQIKNDQTGISKNLRKIGSRAKFCLTGTPIM 431
Query: 476 NNLKELWALFN--FCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRER 533
N L E+W++++ F +LGD K FK +E I++ + A + EK +G+ +++++R
Sbjct: 432 NKLMEMWSIYDYVFYGDNILGDKKEFKTNFERSIVKSRKRDASNTEKVLGNKLSQQMRSL 491
Query: 534 IQPYFLRRLKNEVFHED-----------DVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL 582
IQPY LRR KN+V D T A +S+KNE+++W L+ Q ++Y +L
Sbjct: 492 IQPYILRRHKNQVLESDHNVGLGTILKKQSTGKAKISQKNELVLWCYLSKTQDRVYTQYL 551
Query: 583 NSEIVLSAFDGSP-----LAALTILKKICDHPLL-------LTKRAAEDVLDGMDSMLNP 630
SEIV +AL+ LK +C+HP L L K ED + ++ ++
Sbjct: 552 KSEIVKQILGKKSNRSCIFSALSTLKMLCNHPRLNNGSAQILNKDVNED--EAFENFISE 609
Query: 631 EDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKML 690
D +K + + + K+ +E S K+ I+ LL + GH LIFSQ + ML
Sbjct: 610 GD----DKDYLDTSGMTCKELIEE-----SSKLQIIVKLLKEHKKTGHRTLIFSQYKTML 660
Query: 691 NLIQESIGSK-GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKAD 749
++++ I K LRIDG A +R V+ FQ+ ++ FLLT+ GG+GLTLT AD
Sbjct: 661 DIVERIITEHLKLKTLRIDGGVAAKERQARVDLFQKNNMYSCFLLTTGSGGVGLTLTAAD 720
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
RVI++DP WNP+ D Q+VDRAYR+GQ K+VV YRL+T GT+EE +YR+Q+ K GL K
Sbjct: 721 RVILIDPHWNPAVDQQAVDRAYRVGQTKNVVTYRLITVGTLEEVVYRRQVIKDGLIKNTL 780
Query: 810 EHKEQIRYF-SQQDLRELLSL-PKQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTL 867
+ Q RYF S Q+L E+L+L KQ + +LH + G+ + E L H++ L+
Sbjct: 781 TKENQYRYFTSDQELLEVLTLRDKQSSETKKLLAELHPK-GE---IYEELGNHVKQLEAY 836
Query: 868 G-IAGVSHHSLLFS 880
I G++ H +L++
Sbjct: 837 SEIDGITWHDMLYN 850
>gi|396491459|ref|XP_003843573.1| similar to DNA repair protein Rhp26/Rad26 [Leptosphaeria maculans
JN3]
gi|312220152|emb|CBY00094.1| similar to DNA repair protein Rhp26/Rad26 [Leptosphaeria maculans
JN3]
Length = 1224
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 199/571 (34%), Positives = 305/571 (53%), Gaps = 84/571 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI- 352
+ +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGLGKT+Q F+AGL +S+L+
Sbjct: 405 FRIPGDIYPALFDYQKTGVQWLWELYSQNVGGIIGDEMGLGKTIQAISFVAGLHYSKLLT 464
Query: 353 KRALVVAPKTLLSHWIKEL--------------TAVGL-----------SAKIREY--FG 385
K +VV P T++ W+ E + G+ ++R Y +
Sbjct: 465 KPVIVVCPATVMKQWVNEFHRWWPALRVSILHTSGSGMLDTQREDRMERELELRSYGDYD 524
Query: 386 TCV----KTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMIL 441
T + K + L+ V +D VL+TTY ++ S+ L I E W+ IL
Sbjct: 525 TTLTGAGKAAKKILEKVKRDGHVLVTTYSGLQTYSEFL-----IPTE-------WECAIL 572
Query: 442 DEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKE 501
DEGH I+NP+T E+ + +RII+SGTP+QNNL ELW+LF+F P LG F+
Sbjct: 573 DEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRN 632
Query: 502 KYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKK 561
++E PI RG +A + E A+ L++ + PY L+R K +V + L +K
Sbjct: 633 QFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKVDV--------ATDLPQK 684
Query: 562 NEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAED 619
E +++ +LT QR YE FL S + S DG + L + L+K+C+HP L +
Sbjct: 685 KEQVLFCKLTRQQRAAYEGFLASNDMKSITDGKRNMLFGVDYLRKVCNHPDLTEHKI--- 741
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
+++K + N S K+ + LL GH
Sbjct: 742 --------------------------LSKKPGYDYGAPNRSGKMQVVKELLSLWKKGGHK 775
Query: 680 VLIFSQTRKMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
L+F+Q R ML+++Q+ + G + R+DG T +R +V++F +FLLT++V
Sbjct: 776 TLLFAQHRIMLDILQKFVSHLPGINWRRMDGETPIKERQNLVDEFNNNPDLDVFLLTTKV 835
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLG+ LT A+RVI+ DP WNPSTD Q+ +R++R+GQK++V +YRLM+ GT+EEKIY +Q
Sbjct: 836 GGLGVNLTGANRVIIYDPDWNPSTDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQ 895
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IFK L + +Q + F DL +L +L
Sbjct: 896 IFKQFLTNKVLKDPKQRQTFQMSDLHDLFTL 926
>gi|346327353|gb|EGX96949.1| DNA repair protein Rhp26/Rad26 [Cordyceps militaris CM01]
Length = 1152
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 199/576 (34%), Positives = 303/576 (52%), Gaps = 79/576 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
LPG I LF +Q+ G++W+ L+ Q GGI+GD+MGLGKT+Q+ F+A L S+ +KR
Sbjct: 387 LPGDIHPSLFGYQKTGVQWMAELYNQRVGGIVGDEMGLGKTVQLIAFVAALHSSKKLKRP 446
Query: 355 ALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQY--------------- 397
+VVAP TLL W+ E L I G+ + E Y
Sbjct: 447 VIVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPAAEDDYDLDHFRPMASKSANA 506
Query: 398 -------VLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNP 450
V+ VL+TTY ++ + L W+Y +LDEGH I+NP
Sbjct: 507 ARRIIRGVVTKGHVLVTTYTGLQTYADELLKVE------------WEYAVLDEGHKIRNP 554
Query: 451 STQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRG 510
+ + + E+ + +R+I+SGTPIQNNL ELW+LF+F P LG F+ ++E+PI +G
Sbjct: 555 NAEITVTCKELNTPNRVILSGTPIQNNLTELWSLFDFIYPMRLGTLVNFRAQFEIPIRQG 614
Query: 511 NDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRL 570
+A + + A+ L+E I Y L+RLK +V +A L +K E +++ +L
Sbjct: 615 GYANASNLQVMTAEKCAEALKETISEYLLQRLKVDV--------AADLPEKTEQVLFCKL 666
Query: 571 TSCQRQLYEAFLNSEIVLSAFD--GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
T QR+ YE FL S+ V + + L + IL+KIC+HP LL K+
Sbjct: 667 TDGQRKAYETFLKSDEVAAILNRRWQSLYGIDILRKICNHPDLLDKK------------- 713
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK-LIPEGHNVLIFSQTR 687
+++K ++ +S K+ LL +IP GH +L+FSQ +
Sbjct: 714 -----------------LSQKAGYEYGSPRLSTKLQLTKDLLQNVMIPNGHKMLLFSQGK 756
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
MLN+I++ + G +LR+DG T R +++ F +FL+T++ GGLG LT
Sbjct: 757 LMLNIIEKCMRDCGISYLRMDGETPVDQRQPMIDRFNNDPDVHVFLMTTRTGGLGTNLTG 816
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
ADR+I+ DP WNPSTD Q+ +RA+R+GQ K V +YRLMT GT+EEKIY +QIFK +
Sbjct: 817 ADRIIIFDPDWNPSTDLQARERAWRLGQNKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNK 876
Query: 808 ATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQL 843
+ +Q + DL +L + QG D + + ++
Sbjct: 877 VLKDPKQRSSYDLSDLYDLFTY-NQGGDAATQRSEV 911
>gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
Length = 1596
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 196/549 (35%), Positives = 293/549 (53%), Gaps = 64/549 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P ++ LF +Q+ ++WLW LH Q GGILGD+MGLGKT+Q+ +LAGL HS L +
Sbjct: 443 FRVPSRLYGRLFDYQQTAVKWLWELHTQRAGGILGDEMGLGKTVQVIAYLAGLHHSGLYR 502
Query: 354 RALVVAPKTLLSHWIKELTA---------VGLSAKIREYFGTCVKT-RQYELQYVLQD-K 402
+L+V P T+L W++EL + + S + T V+ R L+ L
Sbjct: 503 PSLIVCPATVLRQWMRELRSWWPPFRVVLLHESGRSPPAAATAVRPDRPALLEVALSSPS 562
Query: 403 GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP 462
G++LTTYD + W +LDEGH I+NP ++ ++
Sbjct: 563 GLVLTTYD------------NLRLQRDLLLRVRWGVAVLDEGHKIRNPDSEITLVCKQLH 610
Query: 463 SAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRI 522
+ HR+I+SG+PIQN L ELW+LF+F P LG F+ ++ +PI G +A +
Sbjct: 611 TVHRLIMSGSPIQNRLSELWSLFDFIFPGKLGTLPVFQAQFAVPIQVGGYSNASSLQVTT 670
Query: 523 GSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL 582
A LR+ PY LRR K +V +A L K E +++ L S Q +LY A+L
Sbjct: 671 AYKCAVVLRDLTAPYLLRRRKADV--------AAQLPAKMEQVLFCTLVSEQLELYRAYL 722
Query: 583 NSEIVLSAFDGS--PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
S V +GS L + IL+KIC+HP LL + A+D D NP A + KL
Sbjct: 723 ASTEVGEILEGSRRALCGIDILRKICNHPDLLERVTAQDAED----YGNP---ARSGKL- 774
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK 700
VAE+ +L L+F QT++ML+++++ + +
Sbjct: 775 ----RVAER-------------------VLTSWHTARQKALLFCQTQQMLDILEKLVAGR 811
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
G+ + R+DG T + R ++++DF +FLLT++VGGLG+ LT A RV++ DP WNP
Sbjct: 812 GWSYHRMDGGTPVAVRPRLIDDFNTNPDVFVFLLTTKVGGLGVNLTGATRVMLYDPDWNP 871
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQ 820
STD Q+ +RA+RIGQ V +YRL+T GT+EEKIY +QI+K L Q R+F+
Sbjct: 872 STDIQARERAWRIGQSHSVTIYRLITAGTIEEKIYHRQIYKSFLTNKVLRDPRQKRFFTA 931
Query: 821 QDLRELLSL 829
+D+ EL L
Sbjct: 932 RDISELFVL 940
>gi|367051024|ref|XP_003655891.1| hypothetical protein THITE_2120135 [Thielavia terrestris NRRL 8126]
gi|347003155|gb|AEO69555.1| hypothetical protein THITE_2120135 [Thielavia terrestris NRRL 8126]
Length = 1161
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 202/561 (36%), Positives = 302/561 (53%), Gaps = 73/561 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI-KR 354
LPG I LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q+ F+A L +S+++ K
Sbjct: 368 LPGDIYPSLFDYQKTGVQWLAELYAQQVGGIVGDEMGLGKTVQLISFVAALHYSKMLHKP 427
Query: 355 ALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIV 412
+VVAP T+L W+ E L I G+ + + + D+G L D
Sbjct: 428 VIVVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGM--------FNVHDEGELEDHVDDW 479
Query: 413 RNN--SKSLRGSSFISDEAGDDDAI-------------------WDYMILDEGHLIKNPS 451
N ++S + + I D + + W Y +LDEGH I+NP+
Sbjct: 480 DNKKPTRSSKAAKKIVDRVVKNGHVLVTTYAGLQTYGDILIPVDWGYAVLDEGHKIRNPN 539
Query: 452 TQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGN 511
T E+ + +RII+SGTP+QNNL ELW+LF+F P LG F+ ++E+PI G
Sbjct: 540 TAITIYCKELRTPNRIILSGTPMQNNLTELWSLFDFIYPMRLGTLVAFRNQFEIPIRLGG 599
Query: 512 DKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLT 571
+A + + A+ L+E I+PY L+RLK +V +A L KK+E +++ +L+
Sbjct: 600 YANATNLQIMTAQKCAETLKETIRPYLLQRLKVDV--------AADLPKKSEQVLFCKLS 651
Query: 572 SCQRQLYEAFLNSEIVLSAFDGS--PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLN 629
QR+ YE FL S+ + S + + L + IL+KIC+HP LL
Sbjct: 652 RSQREAYELFLKSDEMASILNRTRQSLYGIDILRKICNHPDLL----------------- 694
Query: 630 PEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKM 689
D AL K DV++ S K++ + SLL GH L+F Q +M
Sbjct: 695 --DPALKTKPGYQWGDVSK-----------SGKMAVVQSLLPMWKRLGHKTLLFCQGVQM 741
Query: 690 LNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKA 748
L++I+ + ++R+DG T R +V+ F +FLLT++VGGLG+ LT A
Sbjct: 742 LDIIEAFVRRLDNITYIRMDGKTPVKQRQALVDQFNTDAGLDVFLLTTKVGGLGVNLTGA 801
Query: 749 DRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA 808
+RVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +QIFK L
Sbjct: 802 NRVIIFDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKV 861
Query: 809 TEHKEQIRYFSQQDLRELLSL 829
+ +Q F DL++L SL
Sbjct: 862 LKDPKQQTTFHLNDLQDLFSL 882
>gi|71651388|ref|XP_814373.1| DNA excision/repair protein SNF2 [Trypanosoma cruzi strain CL
Brener]
gi|70879339|gb|EAN92522.1| DNA excision/repair protein SNF2, putative [Trypanosoma cruzi]
Length = 729
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 307/560 (54%), Gaps = 58/560 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTL 363
LF +QREG++WL+ H +G+G +L D+MGLGKT+QI F+ L+ S+L+ ++V P TL
Sbjct: 92 LFDYQREGVQWLYERHRKGRGCLLADEMGLGKTVQIASFVGALYMSQLVTSTIIVVPPTL 151
Query: 364 LSHWIKELTAVG-LSAKIREYFGTCVKTRQYELQYVLQ--DKGVLLTTYDIVRNNSKSLR 420
L W L G L + E K ++ + L+ + LTTY ++R +S ++
Sbjct: 152 LPIWGLALQQWGRLGPPVVEVIHNDAKNKRLQRWQRLKHGTPCLFLTTYGVLRQDSSAM- 210
Query: 421 GSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKE 480
G + DY+I+DE HLIK+ ST +S + + + HRI I+GTP+ NN ++
Sbjct: 211 GVRMV-----------DYVIMDEAHLIKDASTHVFQSAMALSARHRIAITGTPLMNNFED 259
Query: 481 LWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLR 540
LW++F+F +LG + +LRGN++ AL+ E+ ++ I+P+ LR
Sbjct: 260 LWSIFHFIDGSILGTTRADFRSINAVLLRGNERDALENERGDAGRQLALIQAAIRPFMLR 319
Query: 541 RLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSE---IVLSAFDGS-PL 596
R K ++ K ++I+WLRL Q Q Y +FL +E + L + D S PL
Sbjct: 320 RDKRQL--------QMLRVGKRDLIIWLRLNDTQEQQYFSFLKTERVDVTLRSADTSQPL 371
Query: 597 AALTILKKICDHPLL-LTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQ 655
LT L + CDHP L L+ A + +M NP LA A+ + D
Sbjct: 372 VLLTSLMRTCDHPWLSLSDEAYRE------AMQNP--------LASPEANRSCGDALN-- 415
Query: 656 HDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASD 715
S KIS L+L+ K I E L+FS+++++L+L+ ++ F R+DG A +
Sbjct: 416 ----SSKISSALALVVKCIGEQRKTLVFSRSKRLLDLLAVALRCWLIDFARLDGDVPAEE 471
Query: 716 RVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ 775
R+K V F + + + LLT+QVGG+GLT+ A VI++DP+WNPS+D Q++DR +RIGQ
Sbjct: 472 RLKTVQGFNQSERLLVCLLTTQVGGVGLTVEAASAVIIMDPSWNPSSDAQAIDRVHRIGQ 531
Query: 776 KKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI--------RYFSQQDLRELL 827
+DVVVYRL+TCGTVEEK+YR Q+FK K T +EQ RYF++ LR +
Sbjct: 532 TRDVVVYRLITCGTVEEKVYRNQVFKVMAAKQGTSVREQTGRGSAEFYRYFTRLQLRSMF 591
Query: 828 SLPKQGFDVSLTQQQLHEEH 847
+ D S T QL H
Sbjct: 592 DVGT--LDQSETAAQLESLH 609
>gi|326485451|gb|EGE09461.1| DNA repair and recombination protein RAD26 [Trichophyton equinum
CBS 127.97]
Length = 1035
Score = 326 bits (836), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 194/558 (34%), Positives = 295/558 (52%), Gaps = 84/558 (15%)
Query: 311 GLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRAL-VVAPKTLLSHWIK 369
G++WLW L+ Q GGI+GD+MGLGKT+Q+ FLAG+ +S+ +K + VV P T++ W+
Sbjct: 212 GVKWLWELYQQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKLKGPIIVVCPPTVMKQWVN 271
Query: 370 E-------------------LTAVGLSAKIREYFGTCV------------KTRQYELQYV 398
E + + ++ + + + V K + L+ V
Sbjct: 272 EFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGVWGDRNSTSQRGNKAARRILKRV 331
Query: 399 LQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL 458
L+D VL+TTY ++ S L W +LDEGH I+NP T
Sbjct: 332 LEDGHVLVTTYAGLQTYSSLL------------IPVDWSIAVLDEGHKIRNPDTSITIHC 379
Query: 459 LEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDR 518
E+ ++HR+I+SGTP+QNNL ELW+LF+F P LG F+ ++E PI G +A +
Sbjct: 380 KELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRTGGYANASNL 439
Query: 519 EKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY 578
+ + + A+ L++ I PY L+R K +V +A L KK+E +++ +LT QR Y
Sbjct: 440 QVQTAAKCAETLKDAISPYLLQRFKMDV--------AADLPKKSEQVLFCKLTKVQRAAY 491
Query: 579 EAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
EAFL S + S G L + +L+KIC+HP L +
Sbjct: 492 EAFLASGEMSSILRGRREALYGIDMLRKICNHPDLTQHKV-------------------- 531
Query: 637 EKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQES 696
++ K D+ S K+ + SLL+ GH L+F+Q R ML++++
Sbjct: 532 ---------LSTKTDYNYGSGAKSGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERF 582
Query: 697 I-GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVD 755
I G G+ + R+DG T R +V++F +FLLT++VGGLG+ LT ADRVI+ D
Sbjct: 583 IRGFDGFNYRRMDGNTPIKVRQSMVDEFNNDPDLHVFLLTTKVGGLGVNLTGADRVIIYD 642
Query: 756 PAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI 815
P WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EEKIY +QIFK L +Q
Sbjct: 643 PDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 702
Query: 816 RYFSQQDLRELLSLPKQG 833
+ F D+++L +L G
Sbjct: 703 QTFQMSDIQDLFTLGNDG 720
>gi|407042678|gb|EKE41477.1| helicase domain containing protein [Entamoeba nuttalli P19]
Length = 759
Score = 325 bits (834), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 198/571 (34%), Positives = 307/571 (53%), Gaps = 71/571 (12%)
Query: 277 SVLEDEGSITLSGPRSTY----MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMG 332
SV + + S+ G + T+ ++ ++ LF HQR G++W++ L Q GGI+GD+MG
Sbjct: 78 SVKQTKDSVAPLGEKKTFKSGLVMRNELYQSLFEHQRIGVKWMYELFKQHAGGIIGDEMG 137
Query: 333 LGKTMQICGFLAGLFHSRLIKR---------ALVVAPKTLLSHWIKELTAVGLSAKIREY 383
LGKT+ + FL GL + K +LVVAP TL+ HW+ E S ++
Sbjct: 138 LGKTLMVLAFLEGLQCTFFNKEKTETLTCGNSLVVAPLTLIPHWVSEAHRFVPSLRVIIL 197
Query: 384 FGTCVKTRQYELQYV-LQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
T + + + + LTTY+ +R + L + +W ++LD
Sbjct: 198 HNDLSSTNKDNINLLNTTHNSLYLTTYEFIRTHKDIL------------SEYLWFCIVLD 245
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
EGH IKNP+ + +K++ + + R+++SG+PIQNNL ELW+LF+F P LG F+++
Sbjct: 246 EGHKIKNPNAEISKAVKMLEAHQRLLLSGSPIQNNLSELWSLFDFVYPGKLGTLPLFQQQ 305
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
+ PI G+ A + AK LR+ I P+FLRR+K EV +L +
Sbjct: 306 FIKPIRYGSYTSASYFQFMAALKCAKGLRDMIAPFFLRRIKKEVL--------PSLPTRQ 357
Query: 563 EMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDV 620
E V+ LT QR +Y ++NS + DG LAA+ L+KIC+HP L+ K ED
Sbjct: 358 EKFVYCPLTPKQRSMYLEYVNSSSIAKVIDGDMDMLAAIDTLRKICNHPHLINK--TED- 414
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
L PE ++E S K+ ++ LL + EGH
Sbjct: 415 -------LTPETI------------------YKE-----SSKLKYVCDLLKQFKKEGHKA 444
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
LIF QTR+MLN+I++ + ++ +K+LR+DG ++ R + ++ F +F+LT++VGG
Sbjct: 445 LIFCQTRQMLNIIEQMMLNENFKYLRMDGLVSSNKRPEYISQFNNDPTVLVFILTTRVGG 504
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LG+ LT ADRVI+ DP WNP+ D+Q+ +R RIGQ +DV++YRL+ GT+EE IY+KQ+
Sbjct: 505 LGINLTGADRVIMYDPDWNPTVDSQAKERTLRIGQDRDVIIYRLICSGTIEEHIYQKQMA 564
Query: 801 KGGLF-KTATEHKEQIR-YFSQQDLRELLSL 829
K L K +E+ R F +Q +RE L
Sbjct: 565 KEILSDKILCNEEEKTRKQFKKQFIREFFQL 595
>gi|71653576|ref|XP_815423.1| DNA excision/repair protein SNF2 [Trypanosoma cruzi strain CL
Brener]
gi|70880477|gb|EAN93572.1| DNA excision/repair protein SNF2, putative [Trypanosoma cruzi]
Length = 773
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 197/559 (35%), Positives = 305/559 (54%), Gaps = 56/559 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTL 363
LF +QREG++WL+ H +G+G +L D+MGLGKT+QI F+ L+ S+L+ ++V P TL
Sbjct: 136 LFDYQREGVQWLYERHRKGRGCLLADEMGLGKTVQIASFVGALYMSQLVTSTIIVVPPTL 195
Query: 364 LSHWIKELTAVG-LSAKIREYFGTCVKTRQYELQYVLQ--DKGVLLTTYDIVRNNSKSLR 420
L W L G L + E K ++ + L+ + LTTY ++R +S ++
Sbjct: 196 LPIWGLALQQWGRLGPPVVEVIHNDAKNKRLQRWQRLKHGTPCLFLTTYGVLRQDSSAM- 254
Query: 421 GSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKE 480
G + DY+I+DE HLIK+ ST +S + + + HRI I+GTP+ NN ++
Sbjct: 255 GVRMV-----------DYVIMDEAHLIKDASTHVFQSAMALSARHRIAITGTPLMNNFED 303
Query: 481 LWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLR 540
LW++F+F +LG + +LRGN++ AL++E+ ++ I+P+ LR
Sbjct: 304 LWSIFHFIDGSILGTTRADFRSINAVLLRGNERDALEKERGDAGRQLALIQAAIRPFMLR 363
Query: 541 RLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSE---IVLSAFDGS-PL 596
R K ++ K ++I+WLRL + Q Q Y + L +E + L + D S PL
Sbjct: 364 RDKRQL--------QMLRVGKRDLIIWLRLNNTQEQQYFSLLKTERVDVTLRSADTSQPL 415
Query: 597 AALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQH 656
LT L + CDHP L+ D A E + +A +F +
Sbjct: 416 VLLTSLMRTCDHP-----------------WLSLSDEAYREAMQNPLAIPEANRNFGDAL 458
Query: 657 DNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDR 716
+ S KIS ++L+ K I E L+FS+++++L+L+ ++ F R+DG A +R
Sbjct: 459 N--SSKISLAIALVVKCIGEQRKTLVFSRSKRLLDLLAVALRCWWIDFARLDGDVPAEER 516
Query: 717 VKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQK 776
+K V F + + + LLT+QVGG+GLT+ A VI++DP+WNPS+D Q++DR +RIGQ
Sbjct: 517 LKTVQGFNQSERLLVCLLTTQVGGVGLTVEAASAVIIMDPSWNPSSDAQAIDRVHRIGQT 576
Query: 777 KDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI--------RYFSQQDLRELLS 828
+DVVVYRL+TCGTVEEK+YR Q+FK K T +EQ RYF++ LR +
Sbjct: 577 RDVVVYRLITCGTVEEKVYRNQVFKVMAAKQGTSVREQTGRDSAEFYRYFTRLQLRSMFD 636
Query: 829 LPKQGFDVSLTQQQLHEEH 847
+ D S T QL H
Sbjct: 637 VGT--LDQSETAAQLESLH 653
>gi|403340600|gb|EJY69589.1| DNA excision repair protein ERCC-6-like protein [Oxytricha
trifallax]
Length = 857
Score = 325 bits (833), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 210/634 (33%), Positives = 340/634 (53%), Gaps = 75/634 (11%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTL 363
LFPHQ G++WL++ + G ILGDDMGLGKT+QI +L LF ++ I++ L+V P TL
Sbjct: 198 LFPHQIIGVKWLYANYLDKMGCILGDDMGLGKTVQISVYLGCLFQTKKIRQCLIVVPATL 257
Query: 364 LSHWIKELTAVGLSAKIR-EYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGS 422
L +W E+ + I+ + K R+ ++ + K V +T+ ++V + +
Sbjct: 258 LDYWNSEIIRWTPNINIQIQMLNQDFKKRETAIKVNNRRKTVFITSPNVVAKHIDTFGMY 317
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNNLKEL 481
S + D +++DEGH KN +T+ KSL ++ S ++I++GTP+QNNL E
Sbjct: 318 SKL-----------DLLVIDEGHKAKNINTKFRKSLKDLYVSRQKVILTGTPVQNNLNEF 366
Query: 482 WALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRR 541
++L + +LG K F+ Y I RG K+A + ++L+ +P+FLRR
Sbjct: 367 YSLIDIINDGVLGAFKEFQSTYSTVIERGLKKNAKYYNVLKAQEMIQQLKNVYKPHFLRR 426
Query: 542 LKNEVFHEDDVTSSATLSK----------KNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
K E+F S+ LS+ K+++++W+ L Q+++Y+ L + V++A
Sbjct: 427 TKKEIFK----IKSSELSEVELLPNELPIKSDLVIWIPLNEIQKRIYKLILEEDQVMAAQ 482
Query: 592 DGSPLAALTI----LKKICDHPLLLTK-------------------RAAEDVLDGMDSML 628
+ I LK++C HPL+L +A E+ + ++ +
Sbjct: 483 KHLSKKHIFIIILALKQLCVHPLILLHTFFNNFHEEIDEDELEKEAKAIENDQEDIEDIS 542
Query: 629 NPEDA----------ALAEKLAMHIAD--VAEKDDFQEQHDNI--SCKISFILSLLDKLI 674
+ E LA+KL + V + DF++ + + S KI F+ LL +L
Sbjct: 543 DDETKRRMVEEVKHQTLAQKLGLRYIKRMVEDTYDFKDYENWVKQSTKIQFLFQLLKELH 602
Query: 675 PEGHNVLIFSQTRKMLNLIQESI-GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
GH VLIFS+ + +LN++Q+ I YKFLR+DG S R + N F FL
Sbjct: 603 QSGHKVLIFSKLKILLNIVQQVIENDTEYKFLRLDGDVPISARDGLCNKFNSDPSIFCFL 662
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT+QV G+GL L ADR +++DP WNP+ DNQ +DR YRIGQK+DV+VYRL++ +VEEK
Sbjct: 663 LTNQVSGVGLNLVSADRAVIIDPDWNPANDNQCIDRVYRIGQKRDVIVYRLISTCSVEEK 722
Query: 794 IYRKQIFKGGLFKTATE--HKEQIRYFSQQDLRELLSL---PKQGFDVSLTQQQLHEEHG 848
IYR+Q++K L K E ++ ++YF +QDL EL+ KQ + + L Q E H
Sbjct: 723 IYRRQVYKSSLSKATLESNSEKMMKYFDEQDLVELMKFDEKEKQCYTLDLIQ----ERHP 778
Query: 849 DQHNMDESLEAHIQFLD-TLGIAGVSHHSLLFSK 881
+ + H++FL+ +AG+++++ LFSK
Sbjct: 779 FEIVETPTNTTHMEFLNKNEYVAGITNNATLFSK 812
>gi|363748402|ref|XP_003644419.1| hypothetical protein Ecym_1369 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888051|gb|AET37602.1| hypothetical protein Ecym_1369 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1037
Score = 325 bits (833), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 224/669 (33%), Positives = 344/669 (51%), Gaps = 88/669 (13%)
Query: 286 TLSGPR--STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL 343
TLSG + + + +PG I +LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+QI FL
Sbjct: 252 TLSGAKLNNDFKIPGDIFPLLFDYQKTCVQWLYELYQQKSGGIIGDEMGLGKTIQIISFL 311
Query: 344 AGLFHS-RLIKRALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCV----KTRQYELQ 396
A L HS +L + LV+ P T+L W E I GT + K + E++
Sbjct: 312 ASLHHSGKLNRPVLVICPATVLKQWCTEFHKWWPPFRTIILHSIGTGMVNKKKLTEQEIE 371
Query: 397 YVLQDKGVLLTTYDIVRN------------NSKSL------RGSSFISDEAG----DDDA 434
++ +YD N N KSL G I+ G D+
Sbjct: 372 EIIMKSKAEEFSYDDYSNFERTKKEIESNYNIKSLIDKVLNLGHVLITTYVGLKIHADEL 431
Query: 435 I---WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPE 491
+ W Y++LDEGH I+NP+++ + + + + HRII+SGTPIQNNL ELW+LF+F P
Sbjct: 432 LKVDWGYVVLDEGHKIRNPNSEISLTCKRLKTHHRIILSGTPIQNNLTELWSLFDFIFPG 491
Query: 492 LLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDD 551
LG F++++ +PI +A + + + G A LR+ I PY LRRLK
Sbjct: 492 KLGTLPVFQQQFAVPINSAGYANATNIQVQTGFKCAVALRDLISPYLLRRLK-------- 543
Query: 552 VTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHP 609
V + L KK EM+++ ++T Q+ Y FLNS+ ++ +G L + IL+KIC+HP
Sbjct: 544 VDLARDLPKKTEMVLFCKMTQVQKDKYLQFLNSDDLVKIKNGKKQVLFGIDILRKICNHP 603
Query: 610 LLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSL 669
LL + + + S +P+ S K+ + L
Sbjct: 604 DLLEREFKKHNI----SYGDPKR---------------------------SGKMQVVKRL 632
Query: 670 LDKLIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVNDFQ 724
L +GH L+F+Q+R+ML++++ I SK +LR+DG T R +++ F
Sbjct: 633 LQIWHEQGHKALLFTQSRQMLDILESFISSKDPDLSHLTYLRMDGMTDIGHRHALISKFN 692
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ + +FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRL
Sbjct: 693 K-EPYDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDIQARERAWRIGQKREVSIYRL 751
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLH 844
M G++EEKIY +QIFK L Q R+F +L +L +L G D S +
Sbjct: 752 MVAGSIEEKIYHRQIFKQFLTNKILSDPNQKRFFKMNELHDLFTL---GNDCSSGNEAFM 808
Query: 845 EEHGDQHN--MDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVVQEEEEATRRKGTAF 902
+E Q +S E F + I GVS ++ A+ + V+ E R + F
Sbjct: 809 QEVSKQTEKLKKDSSEGADDFNQVINIEGVSKLEGFYN--AKEKEVENMNEDDRLMNSFF 866
Query: 903 VGNSSSSYL 911
G ++ L
Sbjct: 867 GGGDLTNSL 875
>gi|67466735|ref|XP_649509.1| helicase [Entamoeba histolytica HM-1:IMSS]
gi|56465969|gb|EAL44123.1| helicase domain-containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449706136|gb|EMD46046.1| transcription regulatory protein SNF2, putative [Entamoeba
histolytica KU27]
Length = 759
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/571 (34%), Positives = 307/571 (53%), Gaps = 71/571 (12%)
Query: 277 SVLEDEGSITLSGPRSTY----MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMG 332
+V + + S+ G + T+ ++ ++ LF HQR G++W++ L Q GGI+GD+MG
Sbjct: 78 NVKQTKDSVAPLGEKKTFKSGLVMRNELYQSLFEHQRIGVKWMYELFKQHAGGIVGDEMG 137
Query: 333 LGKTMQICGFLAGLFHSRLIKR---------ALVVAPKTLLSHWIKELTAVGLSAKIREY 383
LGKT+ + FL GL + K +LVVAP TL+ HW+ E S ++
Sbjct: 138 LGKTLMVLAFLEGLQCTFFNKEKTETLTCGNSLVVAPLTLIPHWVSEAHRFVPSLRVIIL 197
Query: 384 FGTCVKTRQYELQYV-LQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
T + + + + LTTY+ +R + L + +W ++LD
Sbjct: 198 HNDLSSTNKDNINLLNTTHNSLYLTTYEFIRTHKDIL------------SEYLWFCIVLD 245
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
EGH IKNP+ + +K++ + + R+++SG+PIQNNL ELW+LF+F P LG F+++
Sbjct: 246 EGHKIKNPNAEISKAVKMLEAHQRLLLSGSPIQNNLSELWSLFDFVYPGKLGTLPLFQQQ 305
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
+ PI G+ A + AK LR+ I P+FLRR+K EV +L +
Sbjct: 306 FIKPIRYGSYTSASYFQFMAALKCAKGLRDMIAPFFLRRIKKEVL--------PSLPTRQ 357
Query: 563 EMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDV 620
E V+ LT QR +Y ++NS + DG LAA+ L+KIC+HP L+ K ED
Sbjct: 358 EKFVYCPLTPKQRSMYLEYVNSSSIAKVIDGDMDMLAAIDTLRKICNHPHLINK--TED- 414
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
L PE ++E S K+ ++ LL + EGH
Sbjct: 415 -------LTPETI------------------YKE-----SSKLKYVCDLLKQFKKEGHKA 444
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
LIF QTR+MLN+I++ + ++ +K+LR+DG ++ R + ++ F +F+LT++VGG
Sbjct: 445 LIFCQTRQMLNIIEQMMLNENFKYLRMDGLVSSNKRPEYISQFNNDPTVLVFILTTRVGG 504
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LG+ LT ADRVI+ DP WNP+ D+Q+ +R RIGQ +DV++YRL+ GT+EE IY+KQ+
Sbjct: 505 LGINLTGADRVIMYDPDWNPTVDSQAKERTLRIGQDRDVIIYRLICSGTIEEHIYQKQMA 564
Query: 801 KGGLF-KTATEHKEQIR-YFSQQDLRELLSL 829
K L K +E+ R F +Q +RE L
Sbjct: 565 KEILSDKILCNEEEKTRKQFKKQFIREFFQL 595
>gi|407851691|gb|EKG05465.1| DNA excision/repair protein SNF2, putative [Trypanosoma cruzi]
Length = 775
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 200/560 (35%), Positives = 306/560 (54%), Gaps = 58/560 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTL 363
LF +QREG++WL+ H +G+G +L D+MGLGKT+QI F+ L+ S+L+ ++V P TL
Sbjct: 138 LFDYQREGVQWLYERHRKGRGCLLADEMGLGKTVQIASFVGALYMSQLVTSTIIVVPPTL 197
Query: 364 LSHWIKELTAVG-LSAKIREYFGTCVKTRQYELQYVLQ--DKGVLLTTYDIVRNNSKSLR 420
L W L G L + E K ++ + L+ + LTTY ++R +S ++
Sbjct: 198 LPIWELALQQWGRLGPPVVEVIHNDAKNKRLQRWQRLKHGTPCLFLTTYGVLRQDSSAM- 256
Query: 421 GSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKE 480
G + DY+I+DE HLIK+ ST +S + + + HRI I+GTP+ NN ++
Sbjct: 257 GVRMV-----------DYVIMDEAHLIKDASTHVFQSAMALSARHRIAITGTPLMNNFED 305
Query: 481 LWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLR 540
LW++F+F +LG ++ +LRGN++ AL+ E+ ++ I+P+ LR
Sbjct: 306 LWSIFHFIDGSILGTSRADFRSINAVLLRGNERDALENERGDAGRQLALIQAAIRPFMLR 365
Query: 541 RLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSE---IVLSAFDGS-PL 596
R K ++ K ++I+WLRL Q Q Y + L +E + L + D S PL
Sbjct: 366 RDKRQL--------QMLRVGKRDLIIWLRLNDTQEQRYFSLLKTERVDVTLRSADTSQPL 417
Query: 597 AALTILKKICDHPLL-LTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQ 655
LT L + CDHP L L+ A + +M NP + A + + D
Sbjct: 418 VLLTSLMRTCDHPWLSLSDEAYRE------AMQNPLASPEANR---NCGDALN------- 461
Query: 656 HDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASD 715
S KIS L+L+ K I E L+FS+++++L+L+ ++ F R+DG A +
Sbjct: 462 ----SSKISSALALVVKCIGEQRKTLVFSRSKRLLDLLAVALRCWLIDFARLDGDVPAEE 517
Query: 716 RVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ 775
R+K V F + + + LLT+QVGG+GLT+ A VI++DP+WNPS+D Q++DR +RIGQ
Sbjct: 518 RLKTVQGFNQSERLLVCLLTTQVGGVGLTVEAASAVIIMDPSWNPSSDAQAIDRVHRIGQ 577
Query: 776 KKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI--------RYFSQQDLRELL 827
+DVVVYRL+TCGTVEEK+YR Q+FK K T +EQ RYF++ LR +
Sbjct: 578 TRDVVVYRLITCGTVEEKVYRNQVFKVMAAKQGTSVREQTGRDSAEFYRYFTRLQLRSMF 637
Query: 828 SLPKQGFDVSLTQQQLHEEH 847
+ D S T QL H
Sbjct: 638 DVGT--LDQSETAAQLESLH 655
>gi|240276494|gb|EER40006.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus
H143]
Length = 819
Score = 321 bits (822), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 208/601 (34%), Positives = 306/601 (50%), Gaps = 118/601 (19%)
Query: 275 DDSVLEDEGSITLSGPR-------STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGIL 327
D ++ EDE L P+ Y +PG I LF +Q+ G++WLW L+ Q GGI+
Sbjct: 102 DSTLAEDEKEWFLPHPKVPDKVLDGGYRIPGDIYPYLFDYQKTGVQWLWELYQQKVGGII 161
Query: 328 GDDMGLGKTMQICGFLAGLFHSR-LIKRALVVAPKTLLSHWIKEL--------------T 372
GD+MGLGKT+Q+ FLAGL HS+ L K +VV P T++ W+ E +
Sbjct: 162 GDEMGLGKTIQVIAFLAGLHHSKKLTKSVIVVCPPTVMKQWVNEFHRWWAPFRVSILHSS 221
Query: 373 AVGLSAKIREYFGTC-VKTRQYE-----------------LQYVLQDKGVLLTTYDIVRN 414
G+ E F ++++ +E L+ VL++ VL+TTY +
Sbjct: 222 GSGMVNLRSESFADARLESQLWEPDQPRRLPKEQTAAKRILKRVLEEGHVLVTTY----S 277
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
++ R D W ILDEGH I+NP T E+ +AHR+I+SGTP+
Sbjct: 278 GLQTYRSLLIPVD--------WGCAILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPM 329
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
QNNL ELW+LF+F P LG F+ ++E PI G +A + + + + A+ L++ I
Sbjct: 330 QNNLTELWSLFDFAFPMRLGTLVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAI 389
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG- 593
PY L+R K +V +A L KK+E +++ +LT QR YEAFL S + S G
Sbjct: 390 SPYLLQRFKIDV--------AADLPKKSEQVLFCKLTKLQRSAYEAFLGSNEMSSILRGR 441
Query: 594 -SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
L + +L+KIC+HP L E L++K + + ++
Sbjct: 442 REALYGIDMLRKICNHPDL------------------AEHKVLSKKPSYNYGSASK---- 479
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
S K+ + SLL+ GH L+F+Q R ML+++
Sbjct: 480 -------SGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDIL------------------- 513
Query: 713 ASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYR 772
+R I D +FLLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R
Sbjct: 514 --ERFIISMDIH------VFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWR 565
Query: 773 IGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQ 832
+GQK++V +YRLMT GT+EEKIY +QIFK L + +Q + F DL +L +L
Sbjct: 566 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQMSDLHDLFTLGND 625
Query: 833 G 833
G
Sbjct: 626 G 626
>gi|123977054|ref|XP_001330700.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121897443|gb|EAY02564.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 822
Score = 320 bits (820), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 285/533 (53%), Gaps = 55/533 (10%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
I LFPHQR + WLW L Q GGI GD+MGLGKT F+A L LIK+ L++
Sbjct: 170 IWQSLFPHQRGAIDWLWGLFKQKAGGIEGDEMGLGKTCICATFIASLIQCNLIKKPILIM 229
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P T+ WI+EL K Y T + + + Q +G T +I+ N +S
Sbjct: 230 CPLTVCQQWIRELHIWCPFVKSILYHDTRTNKKISREEILRQVEG----TTNIIVTNYQS 285
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNL 478
+ + D+ W +I DE H I+N T+ ++ + ++ + R+ ++G+PIQN+L
Sbjct: 286 VTS---LKDDTSLQIIDWSCIICDEAHNIRNHKTEISQVVKKLTADFRLAVTGSPIQNDL 342
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
ELW++F+F P LLG F++++ PI +G +A E + A+ LR+ I+PY
Sbjct: 343 LELWSIFDFAYPGLLGAFNVFQQEFADPIKQGGYANASSFEVFRAYSSAQALRDLIKPYL 402
Query: 539 LRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--L 596
LRRLK++V +A L K E I + +LT Q YE FL S V + F+
Sbjct: 403 LRRLKSQV--------NANLPAKTEQIFFCQLTQTQINCYEEFLKSPTVQAIFNNGADMF 454
Query: 597 AALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQH 656
+ +L++IC+HP ++ D NP+
Sbjct: 455 PGMVLLQEICNHP---------NIFDEQKYSTNPK------------------------- 480
Query: 657 DNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDR 716
+SCK ++ +L + EGH L+F+Q+ KML++++E + + +F R+DG T R
Sbjct: 481 --MSCKTKLLMKILPQWHKEGHRCLLFAQSLKMLSILEEIMTNLNLEFFRMDGDTPPERR 538
Query: 717 VKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQK 776
+ I++ F GD LL+ +VGGLG+ LT ADRVI+++P WNPSTD Q+++RAYRIGQ
Sbjct: 539 IVIMDRFNHGDKFAC-LLSKKVGGLGINLTGADRVIIIEPDWNPSTDEQALERAYRIGQT 597
Query: 777 KDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
K V VYRL+ GT+EEKIY+KQIFK L T + Q R F+ + +L SL
Sbjct: 598 KSVSVYRLICVGTIEEKIYKKQIFKQILSNTIMQDARQKRLFNANTVYDLFSL 650
>gi|167375276|ref|XP_001739827.1| transcription regulatory protein SNF2 [Entamoeba dispar SAW760]
gi|165896374|gb|EDR23803.1| transcription regulatory protein SNF2, putative [Entamoeba dispar
SAW760]
Length = 756
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 298/553 (53%), Gaps = 67/553 (12%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
+S ++ ++ LF HQR G++W++ L Q GGI+GD+MGLGKT+ + FL GL +
Sbjct: 96 KSGLVMRNELYQSLFEHQRIGVKWMYELFKQHAGGIVGDEMGLGKTLMVLAFLEGLQCTF 155
Query: 351 LIKR---------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV-LQ 400
K +LVVAP TL+ HW+ E S ++ T + + +
Sbjct: 156 FNKEKTETLTCGNSLVVAPLTLIPHWVSEAHRFVPSLRVIILHNDLSSTNKDNINLLNTT 215
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+ LTTY+ +R + L + W ++LDEGH IKNP+ + +K++
Sbjct: 216 HNSLYLTTYEFIRIHKDIL------------SEYPWFCIVLDEGHKIKNPNAEISKAVKL 263
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ + R+++SG+PIQNNL ELW+LF+F P LG F++++ PI G+ A +
Sbjct: 264 LEAHQRLLLSGSPIQNNLSELWSLFDFVYPGKLGTLPLFQQQFIKPIRYGSYTSASYFQF 323
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
AK LR+ I P+FLRR+K EV +L + E ++ LT QR +Y
Sbjct: 324 MAALKCAKGLRDMIAPFFLRRIKKEVL--------PSLPTRQEKFIYCPLTPKQRSMYLE 375
Query: 581 FLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
++NS + DG LAA+ L+KIC+HP L+ K ED L PE
Sbjct: 376 YVNSSSIAKVIDGDMDMLAAIDTLRKICNHPHLINK--TED--------LTPETI----- 420
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
++E S K+ ++ LL + EGH LIF QTR+MLN+I++ +
Sbjct: 421 -------------YKE-----SSKLKYVCDLLKQFQKEGHKALIFCQTRQMLNIIEQMML 462
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
++ +K+LR+DG ++ R + ++ F +F+LT++VGGLG+ LT ADRVI+ DP W
Sbjct: 463 NEKFKYLRMDGLVSSNKRPEYISQFNNDPTVLVFILTTRVGGLGINLTGADRVIMYDPDW 522
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLF-KTATEHKEQIR- 816
NP+ D+Q+ +R RIGQ +DV++YRL+ GT+EE IY+KQ+ K L K +E+ R
Sbjct: 523 NPTVDSQAKERTLRIGQDRDVIIYRLICSGTIEEHIYQKQMAKEILSDKILCNEEEKTRK 582
Query: 817 YFSQQDLRELLSL 829
F +Q +RE L
Sbjct: 583 QFKKQFIREFFQL 595
>gi|325179864|emb|CCA14266.1| hypothetical protein SORBIDRAFT_03g009030 [Albugo laibachii Nc14]
Length = 938
Score = 319 bits (818), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 300/563 (53%), Gaps = 72/563 (12%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S +P I L+PHQR+ L WL LH + GGILGD+MGLGKT++I ++A + +
Sbjct: 140 SGLAVPTYIYAQLYPHQRQCLEWLHWLHERNTGGILGDEMGLGKTVEIVAYVAAMHGAHR 199
Query: 352 IKRALVVAPKTLLSHWIKEL----------------TAVGLSAK-IREYFGTCVKTRQYE 394
++ L++ P ++L W +E + V LS K E V+ + E
Sbjct: 200 LRSVLLLCPASVLLQWTREFHKWYPKMRITLLHSTGSGVVLSNKSYTELVHEIVENHRRE 259
Query: 395 LQYVLQDK-----GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
D GV+LTTY+ R N + L + WDY++LDEGH I+N
Sbjct: 260 DTSQQADNFTGTGGVILTTYENARQNQQLLL------------NIDWDYVVLDEGHRIRN 307
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
P + + + HR+I++GTPIQN+L+ELW+LF+F P LG F++++ LPI
Sbjct: 308 PDADISLVCKQFRTVHRLILTGTPIQNHLRELWSLFDFVYPGKLGTLPTFEDEFVLPIKT 367
Query: 510 GNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR 569
G +A + + A LR+ I PY LRR K E+ + L +K E I++ R
Sbjct: 368 GGYANASKMQVVMAYKCALVLRDVINPYMLRRTKKEI------QDTLELPEKMEHILFCR 421
Query: 570 LTSCQRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSM 627
LT+ Q YEA+L S V + +++ P A++ L+ +C+HP L+ KRA D
Sbjct: 422 LTAYQHDQYEAYLRSPEVARVLSYELRPFRAISTLRHLCNHPDLV-KRAG-------DEA 473
Query: 628 LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
E+ EK S K+ + +L +GH VL+F+QTR
Sbjct: 474 SRSENFGSIEK---------------------SGKMLVLCKILAMWKDQGHRVLLFTQTR 512
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLT 746
ML++++ + GY R+DG+T +R ++++ F + + IFLLT++ GG+G+ L
Sbjct: 513 MMLDILERLMEHLGYNHCRLDGSTPVKERQRLLDKFNDAESGIFIFLLTTRAGGIGINLA 572
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
A+RV++ DP WNPSTD Q+ +R++RIGQ K V +YRL+T GT+EEKIY +QIFK L
Sbjct: 573 GANRVVIFDPDWNPSTDMQARERSWRIGQIKQVTIYRLITSGTIEEKIYHRQIFKQYLTT 632
Query: 807 TATEHKEQIRYFSQQDLRELLSL 829
++ R F++ LR+L +L
Sbjct: 633 KVLHDPKRKRCFNRHTLRDLFTL 655
>gi|380480210|emb|CCF42568.1| SNF2 super family protein [Colletotrichum higginsianum]
Length = 1153
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 197/563 (34%), Positives = 297/563 (52%), Gaps = 83/563 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LIKR 354
LPG I LF +Q+ G+ WL L+ QG GGI+GD+MGLGKT+Q F+A L +S+ L K
Sbjct: 378 LPGDIHPSLFAYQKTGIHWLAELYEQGVGGIIGDEMGLGKTVQAIAFVAALHYSKKLDKP 437
Query: 355 ALVVAPKTLLSHWIKELTA--VGLSAKIREYFGTCV-------------------KTRQY 393
+VV P T++ W+ E L I G+ + +
Sbjct: 438 VIVVVPATVMQQWVNEFHRWWPALRVSILHSSGSGMVNVNEDDDDESHYRSGRNGAAAHH 497
Query: 394 ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQ 453
++ V++ VL+TTY +++ L +S E W Y ILDEGH I+NP+ +
Sbjct: 498 IVKRVVKHGHVLVTTYAGLQSYEDDL-----LSQE-------WGYAILDEGHKIRNPNAE 545
Query: 454 RAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDK 513
+ ++ + HR+I+SGTPIQNNL ELW+LF+F P LG F+ ++E+PI G
Sbjct: 546 VTIACKKLNTPHRLILSGTPIQNNLVELWSLFDFIFPMRLGTLVNFRHQFEMPIRMGGHA 605
Query: 514 HALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSC 573
+A + A L+E I Y L+RLK +V ++ L +K E +++ +LT
Sbjct: 606 NATNLAVLTAEKCATTLKETISQYLLQRLKTDV--------ASDLPEKTEQVLFCKLTPE 657
Query: 574 QRQLYEAFLNSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
Q + Y F++S+ V + A L + IL+KIC+HP L+
Sbjct: 658 QNEEYVRFIHSDAVSQIMARKRQALYGIDILRKICNHPDLV------------------- 698
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTR 687
+V++K Q +D S + S L ++ +L+P GH L+FSQT+
Sbjct: 699 -------------NVSKKS--QPGYDWGSPRRSGKLQMVGELLPMWKRFGHKTLLFSQTK 743
Query: 688 KMLNLIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLT 746
MLN++QE IG +G ++LR+DG R +++ F +FLLT++ GGLG+ LT
Sbjct: 744 IMLNILQEFIGKMEGMRYLRMDGEVAVEKRQALIDRFNNDPSIDVFLLTTKTGGLGVNLT 803
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
A R+++ DP WNPSTD Q+ +RA+R+GQ K V +YRLMT GT+EEKIY +QIFK +
Sbjct: 804 GATRIVIYDPDWNPSTDLQARERAWRLGQTKPVAIYRLMTSGTIEEKIYHRQIFKQFMTN 863
Query: 807 TATEHKEQIRYFSQQDLRELLSL 829
+ +Q F DL +L S
Sbjct: 864 KVLKDPKQRANFDLSDLYDLFSF 886
>gi|302411025|ref|XP_003003346.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum
VaMs.102]
gi|261358370|gb|EEY20798.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum
VaMs.102]
Length = 1117
Score = 318 bits (815), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 300/559 (53%), Gaps = 76/559 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LIKR 354
LPG I LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q F+A L +S+ L K
Sbjct: 344 LPGDIHPSLFSYQKTGVQWLAELYSQNVGGIVGDEMGLGKTVQAIAFIAALHYSKKLTKP 403
Query: 355 ALVVAPKTLLSHWIKEL----TAVGLSA---------KIRE-------YFGTCVKTRQYE 394
++VAP T+L W+ E A+ +S +RE + G K+ +
Sbjct: 404 VIIVAPATVLRQWVNEFHRWWPALRVSILHSSGSGMINLREDDTDEETHSGRRDKSVRKI 463
Query: 395 LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQR 454
+ V++ VL+TTY+ ++ L WDY +LDEGH I+NP+ +
Sbjct: 464 VDRVVKHGHVLVTTYNGLQTYQDELLHVE------------WDYAVLDEGHKIRNPNAEI 511
Query: 455 AKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKH 514
E+ + +RII+SGTP+QNNL ELW+LF+F P LG F+ ++E+PI +G
Sbjct: 512 TVLCKELRTPNRIILSGTPVQNNLSELWSLFDFIYPMRLGTLVTFRTQFEVPIKQGGYAG 571
Query: 515 ALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQ 574
A + + A+ L+E I Y L+RLK +V +A L K E +++ ++T Q
Sbjct: 572 ATNLQILTAEKCAETLKEAISQYLLQRLKIDV--------AADLPSKTERVLFCKMTDRQ 623
Query: 575 RQLYEAFLNSEIV---LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
+ Y+ FLNS+ V LSA S L + IL+KIC+HP L+
Sbjct: 624 LEAYKQFLNSDAVNQILSARRKS-LYGIDILRKICNHPDLI------------------- 663
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
D L K D EK S K+ + +LL GH L+FSQ++ MLN
Sbjct: 664 DPHLQNKAGYDWGD-PEK----------SGKMLVVRNLLQIWKKLGHKTLLFSQSKMMLN 712
Query: 692 LIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADR 750
+I++ +G + K++R+DG T R +++ F IFLLT++ GGLG+ LT A+R
Sbjct: 713 VIEKFLGGLETVKYVRMDGETSIEKRQSLIDQFNTDPEIDIFLLTTRTGGLGVNLTGANR 772
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE 810
+I+ DP WNPSTD Q+ +RA+R+GQ + V +YRLMT GT+EEKIY +QIFK + +
Sbjct: 773 IIIFDPDWNPSTDMQARERAWRLGQTRSVEIYRLMTAGTIEEKIYHRQIFKQFMTNKVLK 832
Query: 811 HKEQIRYFSQQDLRELLSL 829
+Q F DL +L +
Sbjct: 833 DPKQRAAFDLSDLYDLFTF 851
>gi|256270798|gb|EEU05949.1| Rad26p [Saccharomyces cerevisiae JAY291]
Length = 1085
Score = 318 bits (815), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 325/599 (54%), Gaps = 90/599 (15%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + +PG+I ++LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+Q+ F+A L HS L
Sbjct: 285 SQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGL 344
Query: 352 IK-RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQY------ELQYVLQDK 402
+ L+V P T++ W E L I G+ + + Q +L+ ++ +
Sbjct: 345 LTGPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNS 404
Query: 403 GVLLTTYDIVRNNSKSLRG--SSF----ISDEAGDDDAI-------------------WD 437
+Y+ +N++++ + SS+ + D+ D I W
Sbjct: 405 KPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQ 464
Query: 438 YMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNK 497
Y +LDEGH I+NP ++ + + ++ + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 465 YAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLP 524
Query: 498 WFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT 557
F++++ +PI G +A + + + G A LR+ I PY LRR+K +V +
Sbjct: 525 VFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV--------AKD 576
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL--- 612
L +K EM+++ +LT QR Y FL+S + +G + L + IL+KIC+HP LL
Sbjct: 577 LPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRD 636
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
TKR D D P+ S K+ + LL
Sbjct: 637 TKRHNPDYGD-------PKR---------------------------SGKMQVVKQLLLL 662
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVNDFQEGD 727
+G+ L+F+Q+R+ML++++E I +K +LR+DGTT R +V+ F +
Sbjct: 663 WHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN-NE 721
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
+FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM
Sbjct: 722 SFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVG 781
Query: 788 GTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
G++EEKIY +QIFK L +Q R+F +L +L SL G + + ++L+EE
Sbjct: 782 GSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSL---GGENGYSTEELNEE 837
>gi|392298460|gb|EIW09557.1| Rad26p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1085
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 325/599 (54%), Gaps = 90/599 (15%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + +PG+I ++LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+Q+ F+A L HS L
Sbjct: 285 SQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGL 344
Query: 352 IK-RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQY------ELQYVLQDK 402
+ L+V P T++ W E L I G+ + + Q +L+ ++ +
Sbjct: 345 LTGPVLIVCPATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNS 404
Query: 403 GVLLTTYDIVRNNSKSLRG--SSF----ISDEAGDDDAI-------------------WD 437
+Y+ +N++++ + SS+ + D+ D I W
Sbjct: 405 KPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQ 464
Query: 438 YMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNK 497
Y +LDEGH I+NP ++ + + ++ + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 465 YAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLP 524
Query: 498 WFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT 557
F++++ +PI G +A + + + G A LR+ I PY LRR+K +V +
Sbjct: 525 VFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV--------AKD 576
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL--- 612
L +K EM+++ +LT QR Y FL+S + +G + L + IL+KIC+HP LL
Sbjct: 577 LPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRD 636
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
TKR D D P+ S K+ + LL
Sbjct: 637 TKRHNPDYGD-------PKR---------------------------SGKMQVVKQLLLL 662
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVNDFQEGD 727
+G+ L+F+Q+R+ML++++E I +K +LR+DGTT R +V+ F +
Sbjct: 663 WHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN-NE 721
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
+FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM
Sbjct: 722 SFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVG 781
Query: 788 GTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
G++EEKIY +QIFK L +Q R+F +L +L SL G + + ++L+EE
Sbjct: 782 GSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSL---GGENGYSTEELNEE 837
>gi|6322495|ref|NP_012569.1| Rad26p [Saccharomyces cerevisiae S288c]
gi|730465|sp|P40352.1|RAD26_YEAST RecName: Full=DNA repair and recombination protein RAD26; AltName:
Full=ATP-dependent helicase RAD26
gi|506419|gb|AAA34655.1| gtA1085 [Saccharomyces cerevisiae]
gi|1015683|emb|CAA89562.1| RAD26 [Saccharomyces cerevisiae]
gi|285812926|tpg|DAA08824.1| TPA: Rad26p [Saccharomyces cerevisiae S288c]
Length = 1085
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 325/599 (54%), Gaps = 90/599 (15%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + +PG+I ++LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+Q+ F+A L HS L
Sbjct: 285 SQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGL 344
Query: 352 IK-RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQY------ELQYVLQDK 402
+ L+V P T++ W E L I G+ + + Q +L+ ++ +
Sbjct: 345 LTGPVLIVCPATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNS 404
Query: 403 GVLLTTYDIVRNNSKSLRG--SSF----ISDEAGDDDAI-------------------WD 437
+Y+ +N++++ + SS+ + D+ D I W
Sbjct: 405 KPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQ 464
Query: 438 YMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNK 497
Y +LDEGH I+NP ++ + + ++ + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 465 YAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLP 524
Query: 498 WFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT 557
F++++ +PI G +A + + + G A LR+ I PY LRR+K +V +
Sbjct: 525 VFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV--------AKD 576
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL--- 612
L +K EM+++ +LT QR Y FL+S + +G + L + IL+KIC+HP LL
Sbjct: 577 LPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRD 636
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
TKR D D P+ S K+ + LL
Sbjct: 637 TKRHNPDYGD-------PKR---------------------------SGKMQVVKQLLLL 662
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVNDFQEGD 727
+G+ L+F+Q+R+ML++++E I +K +LR+DGTT R +V+ F +
Sbjct: 663 WHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN-NE 721
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
+FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM
Sbjct: 722 SFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVG 781
Query: 788 GTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
G++EEKIY +QIFK L +Q R+F +L +L SL G + + ++L+EE
Sbjct: 782 GSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSL---GGENGYSTEELNEE 837
>gi|190409514|gb|EDV12779.1| DNA dependent ATPase [Saccharomyces cerevisiae RM11-1a]
Length = 1085
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 325/599 (54%), Gaps = 90/599 (15%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + +PG+I ++LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+Q+ F+A L HS L
Sbjct: 285 SQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGL 344
Query: 352 IK-RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQY------ELQYVLQDK 402
+ L+V P T++ W E L I G+ + + Q +L+ ++ +
Sbjct: 345 LTGPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNS 404
Query: 403 GVLLTTYDIVRNNSKSLRG--SSF----ISDEAGDDDAI-------------------WD 437
+Y+ +N++++ + SS+ + D+ D I W
Sbjct: 405 KPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQ 464
Query: 438 YMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNK 497
Y +LDEGH I+NP ++ + + ++ + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 465 YAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLP 524
Query: 498 WFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT 557
F++++ +PI G +A + + + G A LR+ I PY LRR+K +V +
Sbjct: 525 VFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV--------AKD 576
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL--- 612
L +K EM+++ +LT QR Y FL+S + +G + L + IL+KIC+HP LL
Sbjct: 577 LPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRD 636
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
TKR D D P+ S K+ + LL
Sbjct: 637 TKRHNPDYGD-------PKR---------------------------SGKMQVVKQLLLL 662
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVNDFQEGD 727
+G+ L+F+Q+R+ML++++E I +K +LR+DGTT R +V+ F +
Sbjct: 663 WHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN-NE 721
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
+FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM
Sbjct: 722 SFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVG 781
Query: 788 GTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
G++EEKIY +QIFK L +Q R+F +L +L SL G + + ++L+EE
Sbjct: 782 GSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSL---GGENGYSTEELNEE 837
>gi|320587466|gb|EFW99946.1| DNA repair protein rhp26 [Grosmannia clavigera kw1407]
Length = 1202
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 202/566 (35%), Positives = 295/566 (52%), Gaps = 82/566 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKR 354
LPG I LF +Q+ +RWL L+ GGI+GD+MGLGKT+Q+ F+A L +S RL K
Sbjct: 398 LPGDIYPSLFGYQKTAVRWLAELYDIKVGGIIGDEMGLGKTVQLISFVAALHYSKRLDKP 457
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIR-----------------------EYFGTCVK-- 389
+VVAP T+L W+ E ++ + G+ +K
Sbjct: 458 VIVVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVHSEDLIEKDEISWGGSPLKRG 517
Query: 390 ---TRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
+ + V+Q VL+TTY ++ G I + W Y +LDEGH
Sbjct: 518 SNVAAKAIVDRVVQHGHVLVTTYAGLQTY-----GDILIPVD-------WGYAVLDEGHK 565
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
I+NP+T E+ + +RII+SGTPIQNNL ELW+LF+F P LG F+ ++E+P
Sbjct: 566 IRNPNTALTVYCKELRTPNRIILSGTPIQNNLTELWSLFDFIYPMRLGTLVTFRNQFEIP 625
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
I G +A + + A+ L++ I PY L+R K +V + L KK+E ++
Sbjct: 626 IRLGGYANATNLQIMTAQKCAETLKDAISPYLLQRTKADV--------ATDLPKKSEQVL 677
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDGS--PLAALTILKKICDHPLLLTKRAAEDVLDGM 624
+ +LT QRQ YE FL S+ + + + + L + IL+KIC+HP
Sbjct: 678 FCKLTESQRQAYELFLRSDEMSAILNRARQSLYGIDILRKICNHP--------------- 722
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
LAE H K+ + + S K+ + +LL GH L+F
Sbjct: 723 ---------DLAEPQLKH------KEGYNWGSPSKSGKMQVVKALLQMWKRFGHKTLLFC 767
Query: 685 QTRKMLNLIQESIGSKG-YKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
Q +ML++++ S G ++LR+DG T DR +V+ F +FLLT++VGGLG+
Sbjct: 768 QGTQMLDILEIFTQSLGDIQYLRMDGKTPIKDRQTLVDRFNNDPQLNVFLLTTKVGGLGV 827
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK+ V +YRLMT GT+EEKIY +QIFK
Sbjct: 828 NLTGADRVIIFDPDWNPSTDVQARERAWRLGQKRQVTIYRLMTAGTIEEKIYHRQIFKQF 887
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSL 829
L + +Q F DL +L SL
Sbjct: 888 LTNKVLKDPKQRASFGLHDLHDLFSL 913
>gi|550429|emb|CAA57290.1| RAD26 [Saccharomyces cerevisiae]
Length = 1085
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 325/599 (54%), Gaps = 90/599 (15%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + +PG+I ++LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+Q+ F+A L HS L
Sbjct: 285 SQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGL 344
Query: 352 IK-RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQY------ELQYVLQDK 402
+ L+V P T++ W E L I G+ + + Q +L+ ++ +
Sbjct: 345 LTGPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNS 404
Query: 403 GVLLTTYDIVRNNSKSLRG--SSF----ISDEAGDDDAI-------------------WD 437
+Y+ +N++++ + SS+ + D+ D I W
Sbjct: 405 KPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQ 464
Query: 438 YMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNK 497
Y +LDEGH I+NP ++ + + ++ + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 465 YAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLP 524
Query: 498 WFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT 557
F++++ +PI G +A + + + G A LR+ I PY LRR+K +V +
Sbjct: 525 VFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV--------AKD 576
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL--- 612
L +K EM+++ +LT QR Y FL+S + +G + L + IL+KIC+HP LL
Sbjct: 577 LPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRD 636
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
TKR D D P+ S K+ + LL
Sbjct: 637 TKRHNPDYGD-------PKR---------------------------SGKMQVVKQLLLL 662
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVNDFQEGD 727
+G+ L+F+Q+R+ML++++E I +K +LR+DGTT R +V+ F +
Sbjct: 663 WHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN-NE 721
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
+FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM
Sbjct: 722 SFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVG 781
Query: 788 GTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
G++EEKIY +QIFK L +Q R+F +L +L SL G + + ++L+EE
Sbjct: 782 GSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSL---GGENGYSTEELNEE 837
>gi|151945105|gb|EDN63356.1| DNA dependent ATPase [Saccharomyces cerevisiae YJM789]
Length = 1085
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 325/599 (54%), Gaps = 90/599 (15%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + +PG+I ++LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+Q+ F+A L HS L
Sbjct: 285 SQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGL 344
Query: 352 IK-RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQY------ELQYVLQDK 402
+ L+V P T++ W E L I G+ + + Q +L+ ++ +
Sbjct: 345 LTGPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNS 404
Query: 403 GVLLTTYDIVRNNSKSLRG--SSF----ISDEAGDDDAI-------------------WD 437
+Y+ +N++++ + SS+ + D+ D I W
Sbjct: 405 KPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQ 464
Query: 438 YMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNK 497
Y +LDEGH I+NP ++ + + ++ + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 465 YAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLP 524
Query: 498 WFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT 557
F++++ +PI G +A + + + G A LR+ I PY LRR+K +V +
Sbjct: 525 VFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV--------AKD 576
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL--- 612
L +K EM+++ +LT QR Y FL+S + +G + L + IL+KIC+HP LL
Sbjct: 577 LPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRD 636
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
TKR D D P+ S K+ + LL
Sbjct: 637 TKRHNPDYGD-------PKR---------------------------SGKMQVVKQLLLL 662
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVNDFQEGD 727
+G+ L+F+Q+R+ML++++E I +K +LR+DGTT R +V+ F +
Sbjct: 663 WHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN-NE 721
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
+FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM
Sbjct: 722 SFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVG 781
Query: 788 GTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
G++EEKIY +QIFK L +Q R+F +L +L SL G + + ++L+EE
Sbjct: 782 GSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSL---GGENGYSTEELNEE 837
>gi|349579221|dbj|GAA24384.1| K7_Rad26p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1085
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 325/599 (54%), Gaps = 90/599 (15%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + +PG+I ++LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+Q+ F+A L HS L
Sbjct: 285 SQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGL 344
Query: 352 IK-RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQY------ELQYVLQDK 402
+ L+V P T++ W E L I G+ + + Q +L+ ++ +
Sbjct: 345 LTGPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNS 404
Query: 403 GVLLTTYDIVRNNSKSLRG--SSF----ISDEAGDDDAI-------------------WD 437
+Y+ +N++++ + SS+ + D+ D I W
Sbjct: 405 KPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQ 464
Query: 438 YMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNK 497
Y +LDEGH I+NP ++ + + ++ + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 465 YAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLP 524
Query: 498 WFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT 557
F++++ +PI G +A + + + G A LR+ I PY LRR+K +V +
Sbjct: 525 VFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV--------AKD 576
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL--- 612
L +K EM+++ +LT QR Y FL+S + +G + L + IL+KIC+HP LL
Sbjct: 577 LPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRD 636
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
TKR D D P+ S K+ + LL
Sbjct: 637 TKRHNPDYGD-------PKR---------------------------SGKMQVVKQLLLL 662
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVNDFQEGD 727
+G+ L+F+Q+R+ML++++E I +K +LR+DGTT R +V+ F +
Sbjct: 663 WHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN-NE 721
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
+FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM
Sbjct: 722 SFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVG 781
Query: 788 GTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
G++EEKIY +QIFK L +Q R+F +L +L SL G + + ++L+EE
Sbjct: 782 GSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSL---GGENGYSTEELNEE 837
>gi|346977297|gb|EGY20749.1| DNA repair and recombination protein RAD26 [Verticillium dahliae
VdLs.17]
Length = 1116
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 300/559 (53%), Gaps = 76/559 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LIKR 354
LPG I LF +Q+ G++WL L+ Q GGI+GD+MGLGKT+Q F+A L +S+ L K
Sbjct: 344 LPGDIHPSLFSYQKTGVQWLAELYSQNVGGIVGDEMGLGKTVQAIAFIAALHYSKKLTKP 403
Query: 355 ALVVAPKTLLSHWIKEL----TAVGLSA---------KIRE-------YFGTCVKTRQYE 394
++VAP T+L W+ E A+ +S +RE + G K+ +
Sbjct: 404 VIIVAPATVLRQWVNEFHRWWPALRVSILHSSGSGMINLREDDTDEETHNGRRDKSVRKI 463
Query: 395 LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQR 454
+ V++ VL+TTY+ ++ L WDY +LDEGH I+NP+ +
Sbjct: 464 VDRVVKHGHVLVTTYNGLQTYQDELLHVE------------WDYAVLDEGHKIRNPNAEI 511
Query: 455 AKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKH 514
E+ + +RII+SGTP+QNNL ELW+LF+F P LG F+ ++E+PI +G
Sbjct: 512 TVLCKELRTPNRIILSGTPVQNNLSELWSLFDFIYPMRLGTLVTFRTQFEVPIKQGGYAG 571
Query: 515 ALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQ 574
A + + A+ L+E I Y L+RLK +V +A L K E +++ ++T Q
Sbjct: 572 ATNLQILTAEKCAETLKEAISQYLLQRLKIDV--------AADLPSKTERVLFCKMTDRQ 623
Query: 575 RQLYEAFLNSEIV---LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
+ Y+ FLNS+ V LSA S L + IL+KIC+HP L+
Sbjct: 624 LEAYKQFLNSDAVNQILSARRKS-LYGIDILRKICNHPDLI------------------- 663
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
D L K D EK S K+ + +LL GH L+FSQ++ MLN
Sbjct: 664 DPHLQNKAGYDWGD-PEK----------SGKMLVVRNLLQIWKKLGHKTLLFSQSKMMLN 712
Query: 692 LIQESIGS-KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADR 750
+I++ +G + K++R+DG T R +++ F IFLLT++ GGLG+ LT A+R
Sbjct: 713 VIEKFLGGLETVKYVRMDGETSIEKRQSLIDRFNTDPEIDIFLLTTRTGGLGVNLTGANR 772
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE 810
+I+ DP WNPSTD Q+ +RA+R+GQ + V +YRLMT GT+EEKIY +QIFK + +
Sbjct: 773 IIIFDPDWNPSTDMQARERAWRLGQTRSVEIYRLMTAGTIEEKIYHRQIFKQFMTNKVLK 832
Query: 811 HKEQIRYFSQQDLRELLSL 829
+Q F DL +L +
Sbjct: 833 DPKQRAAFDLSDLYDLFTF 851
>gi|365764698|gb|EHN06219.1| Rad26p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1085
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 325/599 (54%), Gaps = 90/599 (15%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + +PG+I ++LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+Q+ F+A L HS L
Sbjct: 285 SQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGL 344
Query: 352 IK-RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQY------ELQYVLQDK 402
+ L+V P T++ W E L I G+ + + Q +L+ ++ +
Sbjct: 345 LTGPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNS 404
Query: 403 GVLLTTYDIVRNNSKSLRG--SSF----ISDEAGDDDAI-------------------WD 437
+Y+ +N++++ + SS+ + D+ D I W
Sbjct: 405 KPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQ 464
Query: 438 YMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNK 497
Y +LDEGH I+NP ++ + + ++ + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 465 YAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLP 524
Query: 498 WFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT 557
F++++ +PI G +A + + + G A LR+ I PY LRR+K +V +
Sbjct: 525 VFQQQFVIPINIGCYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV--------AKD 576
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL--- 612
L +K EM+++ +LT QR Y FL+S + +G + L + IL+KIC+HP LL
Sbjct: 577 LPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRD 636
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
TKR D D P+ S K+ + LL
Sbjct: 637 TKRHNPDYGD-------PKR---------------------------SGKMQVVKQLLLL 662
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVNDFQEGD 727
+G+ L+F+Q+R+ML++++E I +K +LR+DGTT R +V+ F +
Sbjct: 663 WHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN-NE 721
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
+FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM
Sbjct: 722 SFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVG 781
Query: 788 GTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
G++EEKIY +QIFK L +Q R+F +L +L SL G + + ++L+EE
Sbjct: 782 GSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSL---GGENGYSTEELNEE 837
>gi|207343880|gb|EDZ71203.1| YJR035Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1046
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 325/599 (54%), Gaps = 90/599 (15%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + +PG+I ++LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+Q+ F+A L HS L
Sbjct: 246 SQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGL 305
Query: 352 IK-RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQY------ELQYVLQDK 402
+ L+V P T++ W E L I G+ + + Q +L+ ++ +
Sbjct: 306 LTGPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNS 365
Query: 403 GVLLTTYDIVRNNSKSLRG--SSF----ISDEAGDDDAI-------------------WD 437
+Y+ +N++++ + SS+ + D+ D I W
Sbjct: 366 KPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQ 425
Query: 438 YMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNK 497
Y +LDEGH I+NP ++ + + ++ + +RII+SGTPIQNNL ELW+LF+F P LG
Sbjct: 426 YAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLP 485
Query: 498 WFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSAT 557
F++++ +PI G +A + + + G A LR+ I PY LRR+K +V +
Sbjct: 486 VFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV--------AKD 537
Query: 558 LSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL--- 612
L +K EM+++ +LT QR Y FL+S + +G + L + IL+KIC+HP LL
Sbjct: 538 LPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRD 597
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
TKR D D P+ S K+ + LL
Sbjct: 598 TKRHNPDYGD-------PKR---------------------------SGKMQVVKQLLLL 623
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVNDFQEGD 727
+G+ L+F+Q+R+ML++++E I +K +LR+DGTT R +V+ F +
Sbjct: 624 WHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN-NE 682
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
+FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM
Sbjct: 683 SFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVG 742
Query: 788 GTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
G++EEKIY +QIFK L +Q R+F +L +L SL G + + ++L+EE
Sbjct: 743 GSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSL---GGENGYSTEELNEE 798
>gi|389592353|ref|XP_003721544.1| putative DNA excision/repair protein SNF2 [Leishmania major strain
Friedlin]
gi|321438075|emb|CBZ11827.1| putative DNA excision/repair protein SNF2 [Leishmania major strain
Friedlin]
Length = 925
Score = 317 bits (811), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 298/598 (49%), Gaps = 104/598 (17%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LP + L+PHQR G++WL+S HC+ + +L D+MGLGKT+Q+ FL L+ ++IK
Sbjct: 111 FSLPPDVDARLYPHQRAGVQWLYSRHCKSRACLLADEMGLGKTVQVAAFLGQLYARQMIK 170
Query: 354 RALVVAPKTLLSHWIKELTAVG---LSAKIREYFGTCVKTRQY---ELQYVLQDKGVLLT 407
++V P TL+ W G LS + K RQ +L+Y L VL+T
Sbjct: 171 TTILVVPPTLVPIWTAAFAEWGGASLSRVVEVIHNEPRKKRQARWRKLRYGL--PCVLVT 228
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
TY ++R D A + DY++LDE HLIK+P+T KS L + + H+I
Sbjct: 229 TYGVLRQ------------DAADVSVTLVDYVVLDEAHLIKDPNTCVFKSALTLAARHKI 276
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
++GTP+ N ++W++F F +L +K +LRGN++ A ++ S+
Sbjct: 277 ALTGTPLMNTFDDMWSIFRFLDGSILDMDKSDFNAISATLLRGNERDASAAQREAASSEL 336
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
+L+ I+P+ LRR K DV + S K +++VW+RLT QRQLY AFL+S+ V
Sbjct: 337 AKLQAAIRPFMLRREKK------DVAAQVLSSSKEDVVVWVRLTDVQRQLYAAFLDSKEV 390
Query: 588 LSAFDGS------------------------------------PLAALTILKKICDHPLL 611
SA +G+ PL LT+L +IC HP L
Sbjct: 391 ASAREGAADVDLTEGTADEDGVGMQKSCLGGGGSSAAAAVSTNPLLLLTMLSQICSHPWL 450
Query: 612 LTKRAAEDVLDGMDSMLNPEDAALAEKLAM--HIADVAEKDDFQEQHDNISCKISFILSL 669
S+L D A A LA + A VAE D K+ L L
Sbjct: 451 --------------SLL---DEAFAAALARNPYKAPVAEMGDIFS-----GAKLWVALQL 488
Query: 670 LDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVA 729
L + E L+FS++R++L L+ + ++DG T + R V+ F
Sbjct: 489 LLHCVSEQRKTLVFSRSRRILRLLSFLLQEWRLTHTQVDGDTPSERRCAEVDRFNNDAGV 548
Query: 730 PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGT 789
+ LLT+QVGG+GLT A V+++DP+WNPS D Q+VDR +RIGQ++DVVV+RL+TC T
Sbjct: 549 WVCLLTTQVGGVGLTFNAASAVVLLDPSWNPSADAQAVDRVHRIGQRRDVVVFRLVTCDT 608
Query: 790 VEEKIYRKQIFKGGLF------------------KTATEHKEQIRYFSQQDLRELLSL 829
VEEK+YR QIFK TA E RYF++ LR + S+
Sbjct: 609 VEEKVYRNQIFKRMAALQSMKGDGGSSGGEGRRPPTADAGGELYRYFTRVQLRNMFSM 666
>gi|323347929|gb|EGA82189.1| Rad26p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1085
Score = 316 bits (809), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 203/597 (34%), Positives = 323/597 (54%), Gaps = 90/597 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG+I ++LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+Q+ F+A L HS L+
Sbjct: 287 FKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLT 346
Query: 354 -RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQY------ELQYVLQDKGV 404
L+V P T++ W E L I G+ + + Q +L+ ++ +
Sbjct: 347 GPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNSKP 406
Query: 405 LLTTYDIVRNNSKSLRG--SSF----ISDEAGDDDAI-------------------WDYM 439
+Y+ +N++++ + SS+ + D+ D I W Y
Sbjct: 407 SDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQYA 466
Query: 440 ILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWF 499
+LDEGH I+NP ++ + + ++ + +RII+SGTPIQNNL ELW+LF+F P LG F
Sbjct: 467 VLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVF 526
Query: 500 KEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLS 559
++++ +PI G +A + + + G A LR+ I PY LRR+K +V + L
Sbjct: 527 QQQFVIPINIGXYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV--------AKDLP 578
Query: 560 KKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL---TK 614
K EM+++ +LT QR Y FL+S + +G + L + IL+KIC+HP LL TK
Sbjct: 579 XKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTK 638
Query: 615 RAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLI 674
R D D P+ S K+ + LL
Sbjct: 639 RHNPDYGD-------PKR---------------------------SGKMQVVKQLLLLWH 664
Query: 675 PEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVNDFQEGDVA 729
+G+ L+F+Q+R+ML++++E I +K +LR+DGTT R +V+ F +
Sbjct: 665 KQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN-NESF 723
Query: 730 PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGT 789
+FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM G+
Sbjct: 724 DVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGS 783
Query: 790 VEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
+EEKIY +QIFK L +Q R+F +L +L SL G + + ++L+EE
Sbjct: 784 IEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSL---GGENGYSTEELNEE 837
>gi|259147500|emb|CAY80752.1| Rad26p [Saccharomyces cerevisiae EC1118]
Length = 1085
Score = 315 bits (807), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 203/597 (34%), Positives = 323/597 (54%), Gaps = 90/597 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +PG+I ++LF +Q+ ++WL+ L+ Q GGI+GD+MGLGKT+Q+ F+A L HS L+
Sbjct: 287 FKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLT 346
Query: 354 -RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQY------ELQYVLQDKGV 404
L+V P T++ W E L I G+ + + Q +L+ ++ +
Sbjct: 347 GPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNSKP 406
Query: 405 LLTTYDIVRNNSKSLRG--SSF----ISDEAGDDDAI-------------------WDYM 439
+Y+ +N++++ + SS+ + D+ D I W Y
Sbjct: 407 SDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQYA 466
Query: 440 ILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWF 499
+LDEGH I+NP ++ + + ++ + +RII+SGTPIQNNL ELW+LF+F P LG F
Sbjct: 467 VLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVF 526
Query: 500 KEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLS 559
++++ +PI G +A + + + G A LR+ I PY LRR+K +V + L
Sbjct: 527 QQQFVIPINIGCYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV--------AKDLP 578
Query: 560 KKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLL---TK 614
K EM+++ +LT QR Y FL+S + +G + L + IL+KIC+HP LL TK
Sbjct: 579 PKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTK 638
Query: 615 RAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLI 674
R D D P+ S K+ + LL
Sbjct: 639 RHNPDYGD-------PKR---------------------------SGKMQVVKQLLLLWH 664
Query: 675 PEGHNVLIFSQTRKMLNLIQESIGSKG-----YKFLRIDGTTKASDRVKIVNDFQEGDVA 729
+G+ L+F+Q+R+ML++++E I +K +LR+DGTT R +V+ F +
Sbjct: 665 KQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN-NESF 723
Query: 730 PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGT 789
+FLLT++VGGLG+ LT A+R+I+ DP WNPSTD Q+ +RA+RIGQK++V +YRLM G+
Sbjct: 724 DVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGS 783
Query: 790 VEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
+EEKIY +QIFK L +Q R+F +L +L SL G + + ++L+EE
Sbjct: 784 IEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSL---GGENGYSTEELNEE 837
>gi|345564545|gb|EGX47506.1| hypothetical protein AOL_s00083g315 [Arthrobotrys oligospora ATCC
24927]
Length = 1145
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 195/562 (34%), Positives = 290/562 (51%), Gaps = 65/562 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHC-QGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
+ LPG I LF +Q+ + WLW+LH Q GGILGD+MGLGKT+Q F+AGL +S+L+
Sbjct: 376 FKLPGDIAQSLFDYQKTAVNWLWNLHAKQHTGGILGDEMGLGKTIQTIAFIAGLHYSQLL 435
Query: 353 -KRALVVAPKTLLSHWIKELTA--VGLSAKIREYFGT---CVKTRQYELQYVLQDKGVLL 406
K L+VAP T+L W E L I G+ + + + + D+G+L
Sbjct: 436 TKPVLIVAPATVLKQWCNEFHKWWPCLRVSILHSSGSGMLSIAADKKAEETIDDDEGLLE 495
Query: 407 TTYDIVRNNSKSL----------RGSSFISDEAGDD-------DAIWDYMILDEGHLIKN 449
+ ++ +G IS G D W+ ++LDEGH I+N
Sbjct: 496 VLESAAPSKAQKAAKKIVDKVKAKGHILISTYTGLSTYHKLLLDTDWECVVLDEGHKIRN 555
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
P + + ++ S R I+SGTPIQNNL+ELW+LF+F P LG + F E +PI
Sbjct: 556 PEAKITIAAKQLRSTTRFILSGTPIQNNLRELWSLFDFVYPGKLGIYQVFNENIAIPIKL 615
Query: 510 GNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR 569
G A + A LRE I PY LRRLK +V A L K + +++
Sbjct: 616 GGYAGANSTQIHTAFKCAVVLRELINPYMLRRLKADV---------AVLPPKQDQVLFCN 666
Query: 570 LTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSM 627
L Q++ YE ++ S G LA + +L+KIC+HP L +
Sbjct: 667 LVVEQKEAYENYIKSPEAFDILSGKRDVLAGIDVLRKICNHPDLCNR------------- 713
Query: 628 LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
EKL++ D+ + S K+ + LL + LIFSQ
Sbjct: 714 ---------EKLSID-------HDYDYGNPVRSGKMQIVKGLLKAWEKDNLKCLIFSQGT 757
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
+ML+++++ + K Y++LR+DGTT R +V+ + +FLLT++VGG GL LT
Sbjct: 758 QMLDILEKFVKKK-YRYLRLDGTTDIKLRQSMVDQYNNDPTLQVFLLTTKVGGYGLNLTG 816
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
A R+I+ DP WNPS D Q+ +R++R+GQK +V +YRL++ GT+EEKIY++Q++K L K
Sbjct: 817 ATRIIIFDPDWNPSNDMQARERSWRLGQKHEVRIYRLLSRGTIEEKIYQRQLYKQFLTKK 876
Query: 808 ATEHKEQIRYFSQQDLRELLSL 829
E EQ R F D+R+L +L
Sbjct: 877 ILEDPEQRRAFRMDDMRDLFTL 898
>gi|444319130|ref|XP_004180222.1| hypothetical protein TBLA_0D01950 [Tetrapisispora blattae CBS 6284]
gi|387513264|emb|CCH60703.1| hypothetical protein TBLA_0D01950 [Tetrapisispora blattae CBS 6284]
Length = 1177
Score = 312 bits (800), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 309/594 (52%), Gaps = 106/594 (17%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
T+ +PG+I + LF +Q+ ++WL L+ Q GGI+GD+MGLGKT+QI FLA L HS L+
Sbjct: 366 TFKIPGEIFSSLFNYQKTCVQWLHELYQQKCGGIIGDEMGLGKTIQIIAFLASLHHSNLL 425
Query: 353 K-RALVVAPKTLLSHWIKE------------LTAVGLSAKI-------REYFGTCVKTRQ 392
++V P T++ W E L ++G I E + +
Sbjct: 426 NGPIIIVCPATVMKQWCAEIHKWWPPFRTIILHSIGAGMLINKKKMSEEEMENIIINSNP 485
Query: 393 YELQY-------------------------VLQDKGVLLTTYDIVRNNSKSLRGSSFISD 427
E Y V+ D +++TTY +R +++SL +
Sbjct: 486 NEFTYEDFRNSSKIKTETETKSAIDTLVEKVINDGHIIITTYVGLRIHAESLLKVN---- 541
Query: 428 EAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNF 487
WDY ILDEGH I+NP ++ + + +I + +RII+SGTPIQNNL ELW+LF+F
Sbjct: 542 --------WDYAILDEGHKIRNPDSEISLTCKKIKTYNRIILSGTPIQNNLNELWSLFDF 593
Query: 488 CCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVF 547
P LG F++++ PI G +A + + + G A LR I PY LRR+K +V
Sbjct: 594 IYPGKLGTLPVFQQQFVGPINVGGYANATNIQVQTGYKCAIALRNLISPYLLRRVKADV- 652
Query: 548 HEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKI 605
+ L KK EM+++ +LT QR+ Y FLNS + G L + IL+KI
Sbjct: 653 -------AKDLPKKKEMVLFCKLTEYQRKKYIEFLNSRELEQIKRGKRQVLFGIDILRKI 705
Query: 606 CDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISF 665
C+HP D+LD + ++ ++ D Q + SF
Sbjct: 706 CNHP---------DILDCKEE---------EKRQSIQYGDPKRSGKMQV----VQTTTSF 743
Query: 666 ILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK-----GYKFLRIDGTTKASDRVKIV 720
+ + + L+F+Q+R+ML++++E I K G K+LR+DGTT S R +V
Sbjct: 744 VEE-------KNYKTLLFTQSRQMLDILEEFISYKDKDLQGIKYLRMDGTTSISIRQTLV 796
Query: 721 NDFQEGDVAP----IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQK 776
+ F + +FLLT++VGGLG+ L A+R+I+ DP WNPSTD Q+ +RA+RIGQK
Sbjct: 797 DKFNNDNDRDDNIDLFLLTTRVGGLGVNLIGANRIIIFDPDWNPSTDLQARERAWRIGQK 856
Query: 777 KDVVVYRLMTCGTVEEKIYRKQIFKGGLF-KTATEHKEQIRYFSQQDLRELLSL 829
++V +YRLM GT+EEKIY +QIFK L K +Q R+F +L +L +L
Sbjct: 857 REVSIYRLMINGTIEEKIYHRQIFKQFLTNKILLNDIKQKRFFKMHELHDLFTL 910
>gi|340712112|ref|XP_003394608.1| PREDICTED: DNA excision repair protein ERCC-6-like [Bombus
terrestris]
Length = 1161
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 215/608 (35%), Positives = 327/608 (53%), Gaps = 75/608 (12%)
Query: 253 RRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSG-PR--------STYMLPGKIGNM 303
++ L KS HS VLDD +++ E + SG P+ + + +P I
Sbjct: 273 KKRKSLTKSVHSK--RVLDDGNEEMYRE---RVEKSGYPKDEPLHKIDNLFKIPQSIWKK 327
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK---------R 354
L+ +Q+ ++WLW LH +G GG+LGD+MGLGKT+Q+ FLAGL S L+
Sbjct: 328 LYKYQKVSVQWLWELHLRGLGGLLGDEMGLGKTVQVIAFLAGLDCSELLSDGGRFRGLGP 387
Query: 355 ALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIV 412
++V P TL+ W+K L + GT +Y L + L+ GVL+T+Y +
Sbjct: 388 TIIVCPATLMEQWVKHFHEWWPILRVAVLHQCGTYNGNLEY-LMHSLKSGGVLITSYSGM 446
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGT 472
+ L S W Y+ILDEGH I+NP + +K++ E + HR++++G+
Sbjct: 447 LIHKNLLVTSQ------------WHYVILDEGHKIRNPQAKISKAVKEFSTPHRLLLTGS 494
Query: 473 PIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
P+QN+LKELW+LF+F P LG F E PI RG +A ++ I VA LR+
Sbjct: 495 PMQNSLKELWSLFDFILPGKLGTLPAFLEHCATPITRGGYTNASPLQEAIALQVATMLRD 554
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL---------- 582
I PY LRR KN+V H +L +KNE +++ LT Q++LY+ +L
Sbjct: 555 TITPYMLRRTKNDVQHH------LSLPEKNEQVLFCSLTEEQKELYKEYLRSADVSFILH 608
Query: 583 -NSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAM 641
S V + L AL++L+KIC+HP D+ + + + ED ++
Sbjct: 609 EKSNSVSRRYRARLLIALSVLRKICNHP---------DLFLYTNPVDSDEDIDVSN---- 655
Query: 642 HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKG 701
+ EK + ++ S K+ + SLL +GH VL+F+Q R+M+++++ + S+
Sbjct: 656 ---EALEKFGYWKR----SGKMIVVRSLLKIWKKQGHRVLLFTQGRQMMHVLESLVQSEE 708
Query: 702 YKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
Y +LR+DG T S R + + F + +FLLT++VGGLG+ LT A+RV++ DP WNP+
Sbjct: 709 YSYLRMDGITSMSQRQETIRLFNKDPSYFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPA 768
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQ 821
TD Q+ RA+RIGQ K V +YRL+T GT+EEK+Y +QIFK L E Q R F
Sbjct: 769 TDAQARARAWRIGQNKKVTIYRLITAGTIEEKMYHRQIFKILLANKVLEDPRQHRLFKTS 828
Query: 822 DLRELLSL 829
DL EL +
Sbjct: 829 DLVELFNF 836
>gi|385303978|gb|EIF48017.1| dna dependent atpase [Dekkera bruxellensis AWRI1499]
Length = 862
Score = 310 bits (794), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 201/574 (35%), Positives = 303/574 (52%), Gaps = 73/574 (12%)
Query: 274 SDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGL 333
++D +L DE + +PG I LF +Q+ G++WLW L+ Q GGI+GD+MGL
Sbjct: 135 ANDGILNDE-----------FRIPGDIYPSLFDYQKTGVQWLWELYSQKTGGIIGDEMGL 183
Query: 334 GKTMQICGFLAGLFHS-RLIKRALVVAPKTLLSHWIKELTA------VGLSAKIREYFGT 386
GKT+Q+ FLAGL +S +L K LVV P T+L W E V + I
Sbjct: 184 GKTIQVIAFLAGLQYSGKLKKPVLVVCPATVLRQWCNEFHRWWPAFRVMILHSIGSGMSG 243
Query: 387 CVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
K R+ +L + D+ +S R + I +E + + + + +GH+
Sbjct: 244 MSKKRRSQL------RDEENXEEDLELEEHQSHRSAHSIMNEQNARELV--HRAVSKGHV 295
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
I + RI +GTPIQNNL ELW+LF+F P LG F++++ +P
Sbjct: 296 I-----------ITTYVGVRIYANGTPIQNNLVELWSLFDFIFPGRLGTLPVFQKQFCIP 344
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
I G +A + + + G A L++ I PY LRR+K +V + L KK+EM++
Sbjct: 345 INLGGYANATNVQVQAGYKCAVILKDLISPYLLRRVKADVAQD--------LPKKSEMVL 396
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLDGM 624
+ LT QR LY++FL+SE + G + L + IL+KIC+HP L+ + ++DG
Sbjct: 397 FCNLTKRQRVLYQSFLHSEDIERILKGKRNALYGIDILRKICNHPDLVEGK----IIDGK 452
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
+ + + +AEK S K+ + LL E LIF+
Sbjct: 453 REXGTKDSKKESSRT------LAEK----------SGKMQVVSKLLQLWQKENRKALIFT 496
Query: 685 QTRKMLNLIQESI------GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
QTR+MLN+++ + + + +LR+DGTT +R K+V+ F +FLLT++V
Sbjct: 497 QTRQMLNIMEHYMDVLNRETNNXFGYLRMDGTTPIGERQKLVDSFNTDPKYQVFLLTTRV 556
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLG+ LT A RVI+ DP WNPST Q+ +RA+R+GQKKDV +YRLM GT+EEKIY +Q
Sbjct: 557 GGLGVNLTGASRVIIYDPDWNPSTXIQARERAWRLGQKKDVTIYRLMIAGTIEEKIYHRQ 616
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQ 832
IFK L + +Q R+F D+ +L +L Q
Sbjct: 617 IFKQFLTNKVLKDPKQKRFFKMTDMYDLFTLGDQ 650
>gi|350398865|ref|XP_003485330.1| PREDICTED: DNA excision repair protein ERCC-6-like [Bombus
impatiens]
Length = 1162
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 201/556 (36%), Positives = 305/556 (54%), Gaps = 61/556 (10%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK-- 353
+P I L+ +Q+ ++WLW LH +G GG+LGD+MGLGKT+Q+ FLAGL S L+
Sbjct: 320 IPQSIWKKLYKYQKVSVQWLWELHLRGLGGLLGDEMGLGKTVQVIAFLAGLDCSELLSDG 379
Query: 354 -------RALVVAPKTLLSHWIKELTAVG--LSAKIREYFGTCVKTRQYELQYVLQDKGV 404
+++ P TL+ W+K L + GT +Y L + L+ GV
Sbjct: 380 GRFRGLGPTIIICPATLMEQWVKHFHEWWPILRVAVLHQCGTYNGNLEY-LMHSLKSGGV 438
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
L+T+Y + + L S W Y+ILDEGH I+NP + +K++ E +
Sbjct: 439 LITSYSGMLIHKDLLVTSQ------------WHYVILDEGHKIRNPQAKISKAVKEFSTP 486
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
HR++++G+P+QN+LKELW+LF+F P LG F E PI RG +A ++ I
Sbjct: 487 HRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAAPITRGGYTNASPLQEAIAL 546
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS 584
VA LR+ I PY LRR KN+V H +L +KNE +++ LT Q++LY+ +L S
Sbjct: 547 QVATMLRDTITPYMLRRTKNDVQHH------LSLPEKNEQVLFCSLTGEQKELYKEYLRS 600
Query: 585 -----------EIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDA 633
V + L AL++L+KIC+HP D+ + + + ED
Sbjct: 601 ADVSFILHEKINSVNRRYRARLLIALSVLRKICNHP---------DLFLYTNPVDSDEDI 651
Query: 634 ALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLI 693
++ + EK + ++ S K+ + SLL +GH VL+F+Q R+M++++
Sbjct: 652 DVSN-------EALEKFGYWKR----SGKMIVVRSLLKIWKKQGHRVLLFTQGRQMMHVL 700
Query: 694 QESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIV 753
+ + S+ Y +LR+DG T S R + + F + +FLLT++VGGLG+ LT A+RV++
Sbjct: 701 ESLVQSEEYSYLRMDGITSMSQRQETIRLFNKDPSYFVFLLTTRVGGLGVNLTGANRVVI 760
Query: 754 VDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKE 813
DP WNP+TD Q+ RA+RIGQ K V +YRL+T GT+EEK+Y +QIFK L E
Sbjct: 761 YDPDWNPATDAQARARAWRIGQNKKVTIYRLITAGTIEEKMYHRQIFKILLANKVLEDPR 820
Query: 814 QIRYFSQQDLRELLSL 829
Q R F DL EL +
Sbjct: 821 QHRLFKTSDLVELFNF 836
>gi|401414101|ref|XP_003871549.1| putative DNA excision/repair protein SNF2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487766|emb|CBZ23007.1| putative DNA excision/repair protein SNF2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 927
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 191/557 (34%), Positives = 296/557 (53%), Gaps = 85/557 (15%)
Query: 288 SGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF 347
SGP + LP + L+PHQR G++WL+S HC+ + +L D+MGLGKT+Q+ FL L+
Sbjct: 106 SGP--PFSLPPDVDARLYPHQRAGVQWLYSRHCKSRACLLADEMGLGKTVQVAAFLGQLY 163
Query: 348 HSRLIKRALVVAPKTLLSHW---IKELTAVGLSAKIREYFGTCVKTRQY---ELQYVLQD 401
++IK ++V P TL++ W E L+ + K RQ +L+Y L
Sbjct: 164 ARQMIKTTILVVPPTLVAIWTAAFAEWGGASLTRVVEVIHNEPRKKRQARWRKLRYGL-- 221
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
VLLTTY ++R ++ + G++ + DY++LDE HLIK+P+T +S L +
Sbjct: 222 PCVLLTTYGVLRQDAADM-GATLV-----------DYVVLDEAHLIKDPNTCVFRSALTL 269
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ H+I ++GTP+ N ++W++F F +L +K +LRGN++ A ++
Sbjct: 270 SARHKIALTGTPLMNTFDDMWSVFRFLDGSILDMDKPNFNAVSATLLRGNERDASAAQRE 329
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
+ S+ +L+ I+P+ LRR K DV + S+K +++VW+RLT QRQLY A
Sbjct: 330 VASSELAKLQAAIRPFMLRREKK------DVAAQVLSSEKEDVVVWVRLTDVQRQLYAAV 383
Query: 582 LNSEIVLSAFDGS-------------------------------------PLAALTILKK 604
L+S+ + SA +G+ PL LT+L +
Sbjct: 384 LSSKELASAREGAADVDVTEGTADEGGVVMERSSLGGDGSSAAVATVPTNPLLLLTMLSQ 443
Query: 605 ICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKIS 664
IC+HP L S+L+ E A A + A VAE D K+
Sbjct: 444 ICNHPWL--------------SLLD-ETVAAALSHNPYKAPVAEIGDIFG-----GAKLW 483
Query: 665 FILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ 724
L LL + + E L+FS+++ +L+L+ + ++DG T + R V F
Sbjct: 484 VALQLLLRCVSEQRKTLVFSRSKSLLHLLSFLLREWRLTHTQVDGDTPSERRCAEVERFN 543
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ + LLT+QVGG+GLT A V+++DP+WNPS D Q+VDR +RIGQ++DVVV+RL
Sbjct: 544 KDAGVWVCLLTTQVGGVGLTFNAASAVVLLDPSWNPSADAQAVDRVHRIGQRRDVVVFRL 603
Query: 785 MTCGTVEEKIYRKQIFK 801
+TCGTVEEK+YR QIFK
Sbjct: 604 VTCGTVEEKVYRNQIFK 620
>gi|307111435|gb|EFN59669.1| hypothetical protein CHLNCDRAFT_49470 [Chlorella variabilis]
Length = 1117
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 220/372 (59%), Gaps = 40/372 (10%)
Query: 289 GPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH 348
G R ++L ML+PHQ EG++WLWSL +GGIL DDMGLGKT+Q FLAGL
Sbjct: 186 GERGEFVLNATASTMLYPHQVEGIKWLWSLFRLNRGGILADDMGLGKTIQCAAFLAGLIQ 245
Query: 349 SRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTT 408
RLI+RA+VVAPKTLL+ W KEL GL A+ EY G+ R+ L+ V++ +GVLLTT
Sbjct: 246 GRLIRRAIVVAPKTLLAQWRKELGVCGLQAQAHEYGGS-AGEREAALESVVRRRGVLLTT 304
Query: 409 YDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRII 468
Y +V +N++ L + D DD +WD MI DEGH +KNP Q K+L E+P+ R+I
Sbjct: 305 YGMVLHNAEVL---ARHGDHDPDDGPLWDVMICDEGHKLKNPRMQLRKALDEVPAVLRVI 361
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKE----KYELPILRGNDKHALDREKRIGS 524
ISGTPIQNN+ E+WAL NFC P++LG+ F++ K+E I G DKHA + E+ G+
Sbjct: 362 ISGTPIQNNMMEMWALLNFCVPDVLGEAADFRQGEADKFEKVITVGTDKHATEYERERGA 421
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSA---------------------------- 556
A LR+ I PY LRR K EVF +A
Sbjct: 422 VAAARLRQEIGPYMLRREKKEVFKPAAGDGAAAAAAGGAGEGSGGAAQAAAGGGGGGGSK 481
Query: 557 --TLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD--GSPLAALTILKKICDHPLLL 612
++ K + V L++ QR++Y FLN + V F+ S LAA+T+LKK+CDHP LL
Sbjct: 482 PHSMPDKKGLNVLLKVKPMQRRVYPGFLNFDPVRKVFNQTASALAAITVLKKVCDHPALL 541
Query: 613 TKRAAEDVLDGM 624
+ RAA ++ G+
Sbjct: 542 SDRAAHGIVSGV 553
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/223 (52%), Positives = 145/223 (65%), Gaps = 25/223 (11%)
Query: 660 SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT-TKASDRVK 718
SCK F+++LL L+ EGH LIFSQ+R MLN+++ +I + +++ RIDG+ A++R
Sbjct: 658 SCKTVFVMALLKNLVGEGHRTLIFSQSRVMLNILESAIKEEQWRYCRIDGSVASAAEREA 717
Query: 719 IVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKD 778
V FQ PIFLLTSQVGGLGLTLT ADRVI++DPAWNPSTDNQSVDRAYRIGQK+D
Sbjct: 718 RVRQFQTSHTIPIFLLTSQVGGLGLTLTAADRVIILDPAWNPSTDNQSVDRAYRIGQKRD 777
Query: 779 VVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSL 838
VVVYRL++CGTVEE IYR+ QDLR+L L + S
Sbjct: 778 VVVYRLISCGTVEENIYRR-----------------------QDLRDLFRLEPSECEASQ 814
Query: 839 TQQQLHEEHGDQHNMDESLEAHIQFLDTLGI-AGVSHHSLLFS 880
TQ++LH+ H Q L H+ FL TL AGVS H LLFS
Sbjct: 815 TQRELHDRHAHQRRESPDLTRHLAFLRTLDCYAGVSDHDLLFS 857
>gi|357608812|gb|EHJ66159.1| putative DNA excision repair protein ERCC-6 [Danaus plexippus]
Length = 734
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/525 (33%), Positives = 280/525 (53%), Gaps = 67/525 (12%)
Query: 331 MGLGKTMQICGFLAGLFHSRL-----IKRALVVAPKTLLSHWIKELTAV--GLSAKIREY 383
MGLGKT+Q+ FLAGL + + ++++P T++ W+ + + +
Sbjct: 1 MGLGKTVQVIAFLAGLSMTDSGSWGGLGPCIILSPATVIYQWVSHFHYWFPQIRVAVLHH 60
Query: 384 FGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDE 443
G+ + ++ + G+LL TY + K L W Y+ILDE
Sbjct: 61 SGSHAGSHHKLIRDMHSSHGILLVTYAGIVKYIKDLLSRK------------WHYIILDE 108
Query: 444 GHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKY 503
GH I+NP TQ +K + ++H+++I+G+P+QN+L+ELW+LF+F P LLG + F E +
Sbjct: 109 GHKIRNPDTQVSKMVKRFETSHKLLITGSPMQNSLQELWSLFDFMRPGLLGSHTAFMEHF 168
Query: 504 ELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNE 563
+PI +G +A + ++ +AK L+ I PY LRR K EV +D + L +KNE
Sbjct: 169 AVPITQGGYANASEFQEATALEIAKALKNLITPYMLRRTKTEV--QDHIQ----LPEKNE 222
Query: 564 MIVWLRLTSCQRQLYEAFLNSEIVLSAFD-----GSP-----LAALTILKKICDHPLLLT 613
+++ LT Q+ LY +L S + S D G P L AL+ L+KIC+HP +
Sbjct: 223 QVLFCSLTQEQKDLYMGYLMSSTIRSILDKDSKHGEPMRARILVALSTLRKICNHPDIYL 282
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQ---HDNISCKISFILSLL 670
A E E DD E+ + S K+S + SLL
Sbjct: 283 YEAYE-----------------------------ETDDIDEKSFGNWKRSGKMSVVHSLL 313
Query: 671 DKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP 730
+ +GH LIF+Q+R ML ++++ + + +K+LR+DG+ R ++ + E
Sbjct: 314 KIWLKQGHRALIFTQSRAMLCILEQHLQNHSFKYLRMDGSVNVGVRQNLIKTYNENPEYL 373
Query: 731 IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTV 790
+FL T++VGGLG+ LT ADRVI+ DP WNP+TDNQ+ +RA+RIGQ+++V VYRL++ GT+
Sbjct: 374 VFLATTRVGGLGVNLTGADRVIIYDPDWNPATDNQAKERAWRIGQERNVTVYRLLSAGTI 433
Query: 791 EEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFD 835
EEKIY++QIFK L Q + +L+ L SL +D
Sbjct: 434 EEKIYQRQIFKNFLSNKILIDPNQKNVLTTSNLQSLFSLENLNYD 478
>gi|429962844|gb|ELA42388.1| hypothetical protein VICG_00487 [Vittaforma corneae ATCC 50505]
Length = 647
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/524 (35%), Positives = 286/524 (54%), Gaps = 69/524 (13%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P N LF +Q+ G+ W+ L KGGIL D+MGLGKT+Q+C + LF+S+ +
Sbjct: 97 FRIPMNAWNYLFDYQKLGVMWMLDLFELEKGGILADEMGLGKTIQVCTAIVSLFYSKKAE 156
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVR 413
+ L++AP T++ HW+ +L + KI + + ++ KG+ + +Y+
Sbjct: 157 QFLILAPATIIDHWVDQLRKLEPCPKIYK-------------KLSIKSKGIFVLSYE--- 200
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
S R + + +D + LDEGH IKN + ++S + + R +I+GTP
Sbjct: 201 ----SFRLCNIL--------PTFDVVFLDEGHKIKNKESLISQSAKRMQARCRFVITGTP 248
Query: 474 IQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHA-LDREKRIGSAVAKELRE 532
IQNNL ELW++F+F P +LG F++++E I KH ++EK+I + LR
Sbjct: 249 IQNNLAELWSIFDFVNPNVLGSYSTFQDEFERKI-----KHCKTEKEKQISYQYSVMLRS 303
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSE----IVL 588
I+P+ LRR+K V H L K + ++++ LT Q Q+Y L S+ ++
Sbjct: 304 IIEPFILRRMKASVNH--------ILPSKLDKVIFISLTDKQLQMYLEALKSKKFEILIK 355
Query: 589 SAF--DGSPLAALTILKKICDHPLLLTKRAAEDVL--DGMDSMLNPEDAALAEKLAMHIA 644
S F GS L+AL L+KIC+HPLL+ ++ + D DS NP+ + A
Sbjct: 356 SGFGSKGSLLSALVYLRKICNHPLLVGEKPFVEYSHSDSSDSG-NPD---------LQNA 405
Query: 645 DVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGS--KGY 702
V Q N S K+ +LD+ E + VL+F QT KML + + I S +
Sbjct: 406 SV-------NQLINDSSKLKVTFDMLDQWYSEKNRVLLFFQTYKMLQIAKMGISSFRPDF 458
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
KF+ + G T S R I+N F IFLLT++VGGLGL LT A+R+++ DP WNPST
Sbjct: 459 KFIEMSGKTPTSKRSTIINTFNNDHSYFIFLLTTRVGGLGLNLTGANRIVIYDPDWNPST 518
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
D+Q+ +R YR GQK V +YRL+ T+EEKIY+KQI+K L K
Sbjct: 519 DSQAKERIYRYGQKSKVEIYRLVCRDTIEEKIYQKQIYKDCLSK 562
>gi|221481667|gb|EEE20043.1| DNA excision repair protein ERCC6, putative [Toxoplasma gondii GT1]
Length = 1553
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 198/594 (33%), Positives = 294/594 (49%), Gaps = 96/594 (16%)
Query: 280 EDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQI 339
E G + P++ +P I L+PHQ+ G+RWLW L QG GGI+GD+MGLGKT+Q
Sbjct: 664 EGRGEASSESPQTFLRVPKFIWENLYPHQQTGVRWLWQLLKQGVGGIVGDEMGLGKTIQA 723
Query: 340 CGFLAGLFHSRLIK-RALVVAPKTLLSHWIKE-------LTAV--GLSAKIREYFGTCVK 389
FLA L HS +++ R L AP T ++ + L+A+ G++ ++ T ++
Sbjct: 724 VAFLAALHHSGVLQVRNLAAAP-TENGAYVSDDAGSPLTLSALNRGVTTTPQKLLDTIIR 782
Query: 390 TRQYE--LQYVLQDK------------GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
+ ++ D+ G+LLTTY+ R + + L +
Sbjct: 783 NDEVADYAEFASIDRLEEAARAAEESNGILLTTYETFRMHLRLLL------------RYV 830
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W ILDEG I+NP ++ ++P+ HR+I+S TPIQNNL+E W+L +F P LG
Sbjct: 831 WKMAILDEGQKIRNPHAAITLAVKQLPTPHRLILSATPIQNNLQEFWSLLDFAAPGRLGT 890
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E+ PI G +A A LR+ P LRR K E+
Sbjct: 891 LPVFLEQIAEPITMGGYANASRESVEAAYRCACLLRKVALPLILRRSKKEM------QEF 944
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLN-SEIVLSAFDGSP-LAALTILKKICDHPLLLT 613
L K E ++ +T+ Q LY FL SE L D L L++L+KI +HP LL
Sbjct: 945 LRLPNKAEEVLLCNMTAEQYALYVDFLAASEETLEKRDRCRMLFTLSVLRKIANHPDLLL 1004
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
+ + + PED E+ S K+ + +L
Sbjct: 1005 ----------VHNEVRPEDYGNPER---------------------SGKLIVLREVLRVW 1033
Query: 674 IPEGHNVLIFSQTRKMLNLIQESI--------------------GSKGYKFLRIDGTTKA 713
EG VL+F+QT +ML+++Q + G KG+ FLR+DG
Sbjct: 1034 KAEGRRVLLFAQTVQMLDILQRFLETCDPSVPSSSSSAPSSTIGGKKGFSFLRLDGGVPV 1093
Query: 714 SDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRI 773
+ R IV+ FQ LLT++VGG+GL LT ADRV++ DP WNP TD Q+ +R++RI
Sbjct: 1094 ASRHAIVDSFQRDSSIFALLLTTRVGGVGLNLTAADRVVIFDPDWNPMTDMQARERSWRI 1153
Query: 774 GQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELL 827
GQ KDV +YRL+T G+VEEK+Y +Q+FK L + + Q ++F + DL+E+L
Sbjct: 1154 GQSKDVCIYRLLTSGSVEEKVYHRQVFKFFLSQKVLQDPRQRKFFKRNDLQEML 1207
>gi|74197304|dbj|BAC32227.2| unnamed protein product [Mus musculus]
Length = 519
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 167/435 (38%), Positives = 253/435 (58%), Gaps = 45/435 (10%)
Query: 304 LFPHQREGLRWLWSLHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKT 362
LF HQ+EG+ +L+SL+ G KGGIL DDMGLGKT+QI FL+G+F + L+ L++ P
Sbjct: 97 LFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLSGMFDASLVNHVLLIMPTN 156
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSK---SL 419
L++ W+ E +++ + G+ R L + Q GV++TTY ++ NN + S
Sbjct: 157 LINTWVNEFAKWTPGMRVKTFHGSSKSERTRSLTRIQQRNGVVITTYQMLLNNWQQLASF 216
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
G +F +WDY+ILDE H IK+ ST+ A IP+++R++++GTP+QNNL+
Sbjct: 217 NGQAF----------VWDYVILDEAHKIKSASTKSAVCARAIPASNRLLLTGTPVQNNLQ 266
Query: 480 ELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
ELW+LF+F C LLG K FK +YE PI+R +K A EK +G +++ L E I+PYF
Sbjct: 267 ELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISENLMEIIKPYF 326
Query: 539 LRRLKNEVFHE----------------DDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL 582
LRR K EV + + + +L++KN++IVW+RL Q ++Y F+
Sbjct: 327 LRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPLQEEIYRKFV 386
Query: 583 NSEIV--LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
+ + + L SPLA L +LKK+CDHP LL+ RA +LN A + +
Sbjct: 387 SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACR--------LLNLGTATFSAQDE 438
Query: 641 MHIADVAEKDDFQEQHDNI----SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQES 696
DV+ + D S K+ F++SLL++L EGH L+FSQ+ K+LN+I+
Sbjct: 439 NEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIERL 498
Query: 697 IGSKGYKFLRIDGTT 711
+ +K +K LRIDGT
Sbjct: 499 LKNKHFKTLRIDGTV 513
>gi|313238451|emb|CBY13525.1| unnamed protein product [Oikopleura dioica]
Length = 590
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 283/546 (51%), Gaps = 72/546 (13%)
Query: 308 QREGLRWLWSLHCQGK----------GGILGDDMGLGKTMQICGFLAGLFHSRLIKRALV 357
+REG++W+W+ QG GG+L DDMGLGKT+Q+ F++ L L+
Sbjct: 77 EREGIQWMWNAVHQGNISLSVEKRIYGGLLSDDMGLGKTIQVAAFISALVDMEEATHFLI 136
Query: 358 VAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK----GVLLTTYDIVR 413
P +L+++W EL + + ++ T R+ Q + + K V++ +Y +
Sbjct: 137 FVPNSLIANWESELKK--WAPNLEQFLFTGELQRKKREQNLREAKKSNSAVVIASYGLCN 194
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
NN + + G D WDYMILDE H IKN ST+ AK+++ I S HR++++GTP
Sbjct: 195 NNID-------VFNSYGSKDWTWDYMILDEAHTIKNSSTKTAKTIVSINSTHRLLMTGTP 247
Query: 474 IQNNLKELWALFNFCCPEL---LGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
+ N L + + L N + +K+ KE Y PI G K+A + ++K +
Sbjct: 248 VMNKLVDFYNLINVLSQGTMLKMSQHKFIKE-YMKPIENGRKKNAPAFAVHRANTLSKVI 306
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSA-----TLSKKNEMIVWLRLTSCQRQLYEAFLNSE 585
R++ + LRR K EV +S + TL KN+ ++W ++T+ Q +Y N+
Sbjct: 307 RDKTDFWILRRTKKEVNQASTASSGSGSTFPTLPAKNDFVLWCKMTARQLVIYNGVRNAL 366
Query: 586 IVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ S SPL T+L IC+ P R + L G
Sbjct: 367 MAKS----SPLVQCTLLNMICNCP-----RIMPNYLVG---------------------- 395
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
+ H+N S +F L++L+ E +LIFS ++K+L +I++ + K K+
Sbjct: 396 --------DTHNNDSDLKNFDCVPLEELLAESAKILIFSNSKKILTIIEKLLSGKNIKYD 447
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
RIDGT + +R V+ FQ + LLT+ VG +GLTLT A RVIV DP WNPS D+Q
Sbjct: 448 RIDGTIQPKERNNKVHRFQTDSTIKVCLLTTGVGAVGLTLTAATRVIVFDPYWNPSKDDQ 507
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLF-KTATEHKEQIRYFSQQDLR 824
+VDRAYRIGQK VVV+RL+TC T+EEKIY KQ+FK + + E+ + R F+ +D+
Sbjct: 508 AVDRAYRIGQKNAVVVFRLITCETIEEKIYSKQLFKKSIICQNNGENDDPTRLFNDKDIY 567
Query: 825 ELLSLP 830
EL P
Sbjct: 568 ELFKSP 573
>gi|296472015|tpg|DAA14130.1| TPA: excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Bos taurus]
Length = 1006
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/509 (34%), Positives = 269/509 (52%), Gaps = 59/509 (11%)
Query: 403 GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP 462
G+L+T+Y +R + D+ D W Y+ILDEGH I+NP+ + +
Sbjct: 87 GILITSYSYIR----------LMQDDISRHD--WHYVILDEGHKIRNPNAAVTLACKQFR 134
Query: 463 SAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRI 522
+ HRII+SG+P+QNNL+ELW+LF+F P LG F E++ +PI G +A + +
Sbjct: 135 TPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKT 194
Query: 523 GSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL 582
A LR+ I PY LRR+K+ DV S +L KNE +++ RLT Q ++Y+ F+
Sbjct: 195 AYKCACVLRDTINPYLLRRMKS------DVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFI 248
Query: 583 NSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
+S+ V +G + L L+KIC+HP L + G ++ D L E
Sbjct: 249 DSKEVYRILNGEMQIFSGLVALRKICNHPDLFS--------GGPKNLKGIPDEELGE--- 297
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK 700
D F + S K+ + SLL +G VL+FSQ+R+ML++++ + ++
Sbjct: 298 ---------DQFG--YWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQ 346
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
Y +L++DGTT + R ++ + E +FLLT++VGGLG+ LT A+RVI+ DP WNP
Sbjct: 347 KYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNP 406
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQ 820
STD Q+ +RA+RIGQKK V VYRL+T GT+EEKIY +QIFK L + +Q R+F
Sbjct: 407 STDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKS 466
Query: 821 QDLRELLSLPK---------------QGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLD 865
DL EL +L G DV ++ L D+S+ QF D
Sbjct: 467 NDLYELFTLSSPDTSQSTETSAIFAGTGSDVQTPKRHLKRRLQQACGTDQSVPVDRQFPD 526
Query: 866 --TLGIAGVSHHSLLFSKTARVQVVQEEE 892
T A +S + + + V V ++
Sbjct: 527 CKTSASAAMSSEEVCAASVSEVNAVTSDQ 555
>gi|402587411|gb|EJW81346.1| hypothetical protein WUBG_07746 [Wuchereria bancrofti]
Length = 537
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 189/544 (34%), Positives = 276/544 (50%), Gaps = 88/544 (16%)
Query: 331 MGLGKTMQICGFLAGLFHSRLIKR---------ALVVAPKTLLSHWIKELTAVGLSAKIR 381
MGLGKT+Q+ FL GL S L R L++ P TL+ W+KE R
Sbjct: 1 MGLGKTVQVISFLRGLAFSCLEDRGFSFSGLGPVLIICPTTLIRQWLKEF---------R 51
Query: 382 EYFGTCV------------KTRQYELQYVLQ--DKGVLLTTYDIVRNNSKSLRGSSFISD 427
+F C ++ Q + V+ D VLLT+Y N K L
Sbjct: 52 TWFPLCRVAILHSSGSFHGQSAQLIRKMVISRSDGSVLLTSYGTFAKNRKHL-------- 103
Query: 428 EAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNF 487
D IW Y+ILDEGH I+NP Q ++ EI + HR+I+SG+P+QN+L+ELW+L +F
Sbjct: 104 ----VDKIWHYIILDEGHKIRNPDAQITLAVKEIRTPHRLILSGSPLQNSLRELWSLIDF 159
Query: 488 CCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRR------ 541
P LG K F +K+ +PI +G +A + R A LR+ + F+
Sbjct: 160 VYPGRLGALKSFMDKFSIPITQGGYANATAVQVRTAYKCACILRDLVSEDFIEEIYIKKC 219
Query: 542 ---LKNEVFH-----------EDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
L + E DV S L K E +++ +T CQR+LYE +L+S
Sbjct: 220 IGTLSRDFMERCDQSLSLKTLEKDVEMSIRLPTKTEQVLFCNITPCQRKLYEEYLSSREC 279
Query: 588 LSAFDGS--PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
G L L+K+C+HP D++ G + N DA E++
Sbjct: 280 DRILSGKMDAFVGLITLRKLCNHP---------DLVTGGPNKFNDYDATADEEM------ 324
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
DF S K+ + +LL +G VL+FSQ+R+ML ++++ + + Y++L
Sbjct: 325 -----DFGAPCR--SGKMQVLKALLKLWKRQGQKVLLFSQSRQMLTILEKFVIQERYEYL 377
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
R+DGTT R +V +F + + IFLLT++VGGLG+ LT A+RV++ DP WNPSTD Q
Sbjct: 378 RMDGTTAVRSRQLLVEEFNKNNEIFIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQ 437
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRE 825
+ +RA+RIGQ++ V +YRL+T GT+EEKIY +QIFK L Q R+F +L E
Sbjct: 438 ARERAWRIGQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILVDPRQRRFFKTNELHE 497
Query: 826 LLSL 829
L L
Sbjct: 498 LFCL 501
>gi|290997882|ref|XP_002681510.1| TATA-binding protein-associated factor 172 [Naegleria gruberi]
gi|284095134|gb|EFC48766.1| TATA-binding protein-associated factor 172 [Naegleria gruberi]
Length = 1788
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 280/556 (50%), Gaps = 84/556 (15%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK-- 353
+P KI L +Q++G+ WL L+ GIL DDMGLGKT+Q + H R I+
Sbjct: 1198 IPIKINAELRQYQKDGVSWLAFLNKYNLHGILCDDMGLGKTLQTICMVYSDIHMRKIQFQ 1257
Query: 354 ----------RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG 403
+LVV P LL HW E++ K +Y+G+ + + + ++ QD
Sbjct: 1258 QTGNQEFVHLPSLVVCPPILLGHWADEISKFCPDLKSLQYYGSVAQRKLWRSEFHNQD-- 1315
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
+++ +YD++RN+ K + + W+Y ILDEGH+IKN TQ K++ +I +
Sbjct: 1316 IVILSYDLLRNDIKDIVAC----------QSNWNYCILDEGHIIKNKKTQITKAVKQIKA 1365
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
HR+++SGTPIQNN+ ELW+LF+F P LG K F KY PI D A +E+ G
Sbjct: 1366 NHRLLLSGTPIQNNVLELWSLFDFLMPGFLGTEKEFNAKYSKPIQSSRDAKANSKEQASG 1425
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
+ + L ++ P+ LRR+K +V H+ L +K + L+ Q +LYE F
Sbjct: 1426 TIALQNLHRQVLPFLLRRVKEDVLHD--------LPEKIIQDYYCDLSPIQSKLYEFFAK 1477
Query: 584 SEIVLSAF-----------------DGSPLAALTILKKICDHPLL-----------LTKR 615
EI + + AL L+K+C+HP L +T+
Sbjct: 1478 KEISKVSQELKSQQEDKTKAKEISENSHVFKALKYLRKLCNHPCLVLEPDHPMYESVTQE 1537
Query: 616 AAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIP 675
+ LD D L+P+ +L + L C I S +D
Sbjct: 1538 IKQQGLDVRDVNLSPKLLSLKQLLN-------------------DCGIGAGNSDVDS--S 1576
Query: 676 EGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIF 732
H VLIF Q ++ML++IQ + +K F+R+DG + + R +IV F +
Sbjct: 1577 NQHRVLIFCQLKQMLDIIQNELFAKYMPNVTFMRLDGDVETTKRYEIVTKFNSDPTIDVL 1636
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LLT+++GGLGL LT AD VI V+ WNPS D Q++DRA+RIGQKK V VYRL+T T+EE
Sbjct: 1637 LLTTKIGGLGLNLTGADTVIFVEHDWNPSADLQAMDRAHRIGQKKVVNVYRLITRNTLEE 1696
Query: 793 KIYRKQIFKGGLFKTA 808
KI Q FK + K+
Sbjct: 1697 KIMGLQKFKTNISKSV 1712
>gi|237832233|ref|XP_002365414.1| DNA excision repair protein, putative [Toxoplasma gondii ME49]
gi|211963078|gb|EEA98273.1| DNA excision repair protein, putative [Toxoplasma gondii ME49]
Length = 1555
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 197/616 (31%), Positives = 296/616 (48%), Gaps = 118/616 (19%)
Query: 280 EDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQI 339
E G + P++ +P I L+PHQ+ G+RWLW L QG GGI+GD+MGLGKT+Q
Sbjct: 654 EGRGEASSESPQTFLRVPKFIWENLYPHQQTGVRWLWQLLKQGVGGIVGDEMGLGKTIQA 713
Query: 340 CGFLAGLFHSRLIK-RALVVAPKTLLSHWIKE-------LTAV--GLSAKIREYFGTCVK 389
FLA L HS +++ R L AP T ++ + L+A+ G++ ++ T ++
Sbjct: 714 VAFLAALHHSGVLQVRNLAEAP-TENGAYVSDDAGSPLTLSALNRGVTTTPQKLLDTFIR 772
Query: 390 TRQYE--LQYVLQDK------------GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
+ ++ D+ G+LLTTY+ R + + L +
Sbjct: 773 NDEVADYAEFASIDRLEEAARAAEESNGILLTTYETFRMHLRLLL------------RYV 820
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W ILDEG I+NP ++ ++P+ HR+I+S TPIQNNL+E W+L +F P LG
Sbjct: 821 WKMAILDEGQKIRNPHAAITLAVKQLPTPHRLILSATPIQNNLQEFWSLLDFAAPGRLGT 880
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E+ PI G +A A LR+ P LRR K E+
Sbjct: 881 LPVFLEQIAEPITMGGYANASRESVEAAYRCACLLRKVALPLILRRSKKEM------QEF 934
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLN-------------SEIVLSAFDGSP------- 595
L K E ++ +T+ Q LY FL ++ S F+ S
Sbjct: 935 LRLPNKAEEVLLCNMTAEQYALYVDFLAVQKARFSRHHYHPNDAFSSPFEASEETLEKRD 994
Query: 596 ----LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
L L++L+KI +HP LL + + + PED E+
Sbjct: 995 RCRMLFTLSVLRKIANHPDLLL----------VHNEVRPEDYGNPER------------- 1031
Query: 652 FQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESI-------------- 697
S K+ + +L EG VL+F+QT +ML+++Q +
Sbjct: 1032 --------SGKLIVLREVLRVWKAEGRRVLLFAQTVQMLDILQRFLETCDPSVPSSSSSA 1083
Query: 698 ------GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
G KG+ FLR+DG + R IV+ FQ LLT++VGG+GL LT ADRV
Sbjct: 1084 PSSTLGGKKGFSFLRLDGGVPVASRHAIVDSFQRDSSIFALLLTTRVGGVGLNLTAADRV 1143
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH 811
++ DP WNP TD Q+ +R++RIGQ KDV +YRL+T G+VEEK+Y +Q+FK L + +
Sbjct: 1144 VIFDPDWNPMTDMQARERSWRIGQSKDVCIYRLLTSGSVEEKVYHRQVFKFFLSQKVLQD 1203
Query: 812 KEQIRYFSQQDLRELL 827
Q ++F + DL+E+L
Sbjct: 1204 PRQRKFFKRNDLQEML 1219
>gi|157822125|ref|NP_001100766.1| DNA excision repair protein ERCC-6 [Rattus norvegicus]
gi|149034143|gb|EDL88913.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6 (predicted) [Rattus norvegicus]
Length = 1325
Score = 285 bits (730), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 269/506 (53%), Gaps = 62/506 (12%)
Query: 330 DMGLGKTMQICGFL-AGLFHSRLIKRALVVAPKTLLSHWIKELTA--VGLSAKIREYFGT 386
D + ++ GFL LF + L+V P T++ W+KE I G+
Sbjct: 462 DAEFDEGFKVPGFLFKKLFKFEGLGPTLIVCPTTVMHQWVKEFHTWWPPFRVAILHETGS 521
Query: 387 CVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
C ++ ++ ++ GVL+T+Y +R + D+ D W Y+ILDEGH
Sbjct: 522 CAHRKERLVRDIVHCHGVLITSYSYIR----------LMQDDISRHD--WHYVILDEGHK 569
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
I+NP+ ++ QNNL+ELW+LF+F P LG F E++ +P
Sbjct: 570 IRNPNA---------------AVTLACKQNNLRELWSLFDFTFPGKLGTLPVFMEQFSVP 614
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
I G +A + + A LR+ I PY LRR+K+ DV S +L KNE ++
Sbjct: 615 ITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMSLSLPDKNEQVL 668
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGM 624
+ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP D+ G
Sbjct: 669 FCRLTDEQHKVYQNFIDSKAVYRILNGENQIFSGLVALRKICNHP---------DLFSG- 718
Query: 625 DSMLNPED-AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIF 683
P++ +AL E D E++ F + S K+ + SLL +G VL+F
Sbjct: 719 ----GPKNTSALPE-------DGLEEEQFG--YWKRSGKMIVVESLLKIWHKQGQRVLLF 765
Query: 684 SQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
SQ+R+ML++++ + + Y +L++DGTT + R ++ + E +FLLT++VGGLG+
Sbjct: 766 SQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFLLTTRVGGLGV 825
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT A+RVI+ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKIY +QIFK
Sbjct: 826 NLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQF 885
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSL 829
L + +Q R+F DL EL +L
Sbjct: 886 LTNRVLKDPKQRRFFKSNDLYELFTL 911
>gi|194381160|dbj|BAG64148.1| unnamed protein product [Homo sapiens]
Length = 863
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 234/396 (59%), Gaps = 30/396 (7%)
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 10 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 69
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 70 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 123
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 124 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 183
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 184 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 221
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 222 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFL 281
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 282 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 341
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 342 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 377
>gi|410057731|ref|XP_003954270.1| PREDICTED: DNA excision repair protein ERCC-6 [Pan troglodytes]
Length = 863
Score = 285 bits (729), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 234/396 (59%), Gaps = 30/396 (7%)
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W Y+ILDEGH I+NP+ + + + HRII+SG+P+QNNL+ELW+LF+F P LG
Sbjct: 10 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 69
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F E++ +PI G +A + + A LR+ I PY LRR+K+ DV S
Sbjct: 70 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMS 123
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLT 613
+L KNE +++ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP L +
Sbjct: 124 LSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFS 183
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
L G+ P+D E+D F + S K+ + SLL
Sbjct: 184 --GGPKNLKGL-----PDDEL-------------EEDQFG--YWKRSGKMIVVESLLKIW 221
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
+G VL+FSQ+R+ML++++ + ++ Y +L++DGTT + R ++ + E +FL
Sbjct: 222 HKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFL 281
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT++VGGLG+ LT A+RV++ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEK
Sbjct: 282 LTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 341
Query: 794 IYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
IY +QIFK L + +Q R+F DL EL +L
Sbjct: 342 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 377
>gi|429328965|gb|AFZ80724.1| helicase family member protein [Babesia equi]
Length = 857
Score = 285 bits (729), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 274/532 (51%), Gaps = 89/532 (16%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF---HSRLI 352
+P N L+ HQ++GL+WL LH + GGIL DDMGLGKT+ + + L H +
Sbjct: 128 IPLDKYNKLYDHQKKGLKWLVGLHKRNHGGILADDMGLGKTVTVLSLFSALTFSSHGKEP 187
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-----GVLLT 407
R LVV TL++ W +E++ + R + + ++ DK +++T
Sbjct: 188 MRILVVCTITLINQWKEEISRWVPDIEFRVFHTS---------HGLINDKKIDRHTIVIT 238
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
+YD +R N + W Y++LDEG I+NP + ++ + + HR+
Sbjct: 239 SYDTLRINIEYFNMCD------------WSYVVLDEGQKIRNPDSAITLAVKTLGTPHRL 286
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
++SG+PIQNNL E W+L +F P LG F E++ PI + DK + A
Sbjct: 287 LMSGSPIQNNLVEFWSLLDFVAPGHLGTLPLFIEQFVDPITQSQDKS----NSSVAYNCA 342
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--- 584
LR I P+ R +K+ + S L KK+E ++ LT+ Q +Y L +
Sbjct: 343 IRLRSLIVPFIQRNVKS------NFIKSINLPKKSEHVLLCNLTATQHYIYVRMLRTLSI 396
Query: 585 ---------EIVLSAFDGSPLAALTILKKICDHP-LLLTKRAAEDVLDGMDSMLNPEDAA 634
E + + L L+IL+KIC+HP L+L++R P+D
Sbjct: 397 DELSSKQRNEELYRRYKNRYLMLLSILRKICNHPDLVLSER--------------PKDFG 442
Query: 635 LAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQ 694
AE+ S K+S L ++ K EGH +L+FSQT +MLN+IQ
Sbjct: 443 KAER---------------------SGKLSVTLEIVSKWESEGHKMLLFSQTIQMLNIIQ 481
Query: 695 ESIGSK--GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVI 752
++ S+ + R+DGT R K+++DF+ I LLT++VGG+GL LT ADR++
Sbjct: 482 AALESRYTAERICRMDGTVSLKKREKVLSDFENCGEKFILLLTTRVGGVGLNLTFADRIL 541
Query: 753 VVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
+ DP WNP TD+Q+ +R YRIGQ KDV++YRL+T TVEEKIY +QI+K L
Sbjct: 542 IYDPDWNPMTDSQARERCYRIGQTKDVLIYRLITAHTVEEKIYHRQIYKYYL 593
>gi|300122947|emb|CBK23954.2| unnamed protein product [Blastocystis hominis]
Length = 787
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 187/592 (31%), Positives = 298/592 (50%), Gaps = 68/592 (11%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + +P + +L+P+Q++G++W+ LH Q GGI+ D+MGLGKT+QI L L +
Sbjct: 152 SGHAVPSHLWEVLYPYQQKGVQWMLKLHGQLVGGIIADEMGLGKTIQIIVTLIVLKFTSE 211
Query: 352 IKRA-------------------------------LVVAPKTLLSHWIKEL-------TA 373
++RA L++ P TLL HWI+EL +
Sbjct: 212 LRRAGRDLLSLPLAEKDFPPNAAESLHLNESNRPSLIIVPATLLGHWIRELHRWCPLLRS 271
Query: 374 VGL-----SAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDE 428
V L S E + ++ + + Q V++TTY+ R +S R +
Sbjct: 272 VVLHNSSQSVLEGETLASILQQSEQQQQKKKNRYDVIITTYEGFRKSSLYRRTN------ 325
Query: 429 AGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFC 488
W Y +LDEG IKN A+ ++ + HR++ISGTP+QNNLKELW+L +F
Sbjct: 326 -------WFYAVLDEGGKIKNAKVTIAQECKKLRTVHRVLISGTPLQNNLKELWSLIDFV 378
Query: 489 CPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFH 548
P LG + F + +PI RG +A + +G + L++ I PY LRRLK F
Sbjct: 379 FPGRLGTLEAFVSAFVVPISRGIYSNASAKAANLGYQCSLILQDSISPYILRRLKKVDFD 438
Query: 549 --EDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS--PLAALTILKK 604
+D+ L K E ++ L+ Q + Y +L S++V ++ G P A+ L++
Sbjct: 439 IVDDNQDVKKELPPKTEQVLSCLLSPEQEKCYLEYLKSDLVQASLIGRSMPFKAIIRLRQ 498
Query: 605 ICDHPLLLTKRAAEDVLDG--MDSMLNPED--AALAEKLAMHIADVAEKDDFQEQHDNIS 660
IC+HP+ E + S P+D + L+ D A + D +
Sbjct: 499 ICNHPVFFRLFHTETTVTNPIYRSEETPKDDPSGLSPTSHEVFNDEAGDSEMDIDFDAVD 558
Query: 661 CKISFILSLLDKLI----PEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDR 716
+ S + ++++++ EGH VLI++QT ML +I + + + + + +DG+T R
Sbjct: 559 WRESSKMIVMNEVLHIWKKEGHKVLIYTQTVSMLTIIMKYVEEQHFSYCMMDGSTPVVKR 618
Query: 717 VKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQK 776
+V+ F +FLLT++VGGLG+ L ADRVI+ DP WNPS D Q+ +R +RIGQ+
Sbjct: 619 QALVDLFNSDPTIFLFLLTTRVGGLGINLVGADRVILFDPDWNPSVDIQARERCWRIGQQ 678
Query: 777 KDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLS 828
+ V +YRL+T GT+EEKIY +QIFK L + F+ +L +L +
Sbjct: 679 RPVTIYRLITSGTIEEKIYHRQIFKTVLSNRVLGEGNDLCSFTSTNLNDLFT 730
>gi|213402301|ref|XP_002171923.1| TATA-binding protein-associated factor MOT1 [Schizosaccharomyces
japonicus yFS275]
gi|211999970|gb|EEB05630.1| TATA-binding protein-associated factor MOT1 [Schizosaccharomyces
japonicus yFS275]
Length = 1915
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 187/547 (34%), Positives = 283/547 (51%), Gaps = 62/547 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI- 352
+++P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H+R +
Sbjct: 1324 FVIPVAIKANLRKYQQEGVSWLAFLNKYQLHGILCDDMGLGKTLQSICIIASDHHNRSVV 1383
Query: 353 -----------KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+LVV P TL HW +EL K+ Y G + L+ +L+D
Sbjct: 1384 FKETGSPQYAHAPSLVVCPSTLAGHWQQELNTYAPFLKVLAYVGP--PGERSRLRGLLED 1441
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YDI RN+ L+ W+Y ILDEGH+IKN + K++ I
Sbjct: 1442 TDVVITSYDICRNDIDDLKSLE------------WNYCILDEGHVIKNAKAKLTKAVKMI 1489
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I+SGTP+QNN+ ELW+LF+F P LG K F+E++ PI D + +EK
Sbjct: 1490 RAYHRLILSGTPVQNNVLELWSLFDFLMPGFLGTEKSFQERFVKPIASSRDNKSSPKEKE 1549
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK +V A L K + ++ Q+QL++ F
Sbjct: 1550 RGALAMETLHKQVLPFLLRRLKEDVL--------ADLPPKIIQDYYCEMSPLQQQLHDEF 1601
Query: 582 ----------LNSEIVLSAFDGSP--LAALTILKKICDHP-LLLTKRAAEDVLDGMDSML 628
++ E+ G AL ++K+C+HP L+LTK+ E +++ L
Sbjct: 1602 VDRLQVDKSKIDEELSSGKVKGKTHIFQALQYMRKLCNHPALILTKKHPESA--AIEARL 1659
Query: 629 NPEDAAL-----AEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIF 683
E++++ A KL + E + E + + S + + H VLIF
Sbjct: 1660 QKENSSIHDFKHAPKLTALRQLLLECNIGTENDSALGANGGTVGSAVSE-----HRVLIF 1714
Query: 684 SQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
Q + ML++++ + K +LR+DG+ + R ++V F + LLT+ VGG
Sbjct: 1715 CQLKDMLDIVENDVLRKTMPSVTYLRLDGSVDPNKRQEVVTRFNSDPSIDVLLLTTHVGG 1774
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q F
Sbjct: 1775 LGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMGLQQF 1834
Query: 801 KGGLFKT 807
K + T
Sbjct: 1835 KLNVAST 1841
>gi|398412117|ref|XP_003857388.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
gi|339477273|gb|EGP92364.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
Length = 1901
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 187/538 (34%), Positives = 280/538 (52%), Gaps = 61/538 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ G+L DDMGLGKT+Q +A H R
Sbjct: 1300 FNIPVAIKAELRSYQQEGVNWLAFLNRYHLHGVLCDDMGLGKTLQTLCIVASDHHLRAEE 1359
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P TL HW +E+ Y G + + Q D
Sbjct: 1360 FAKTQAPDVRRLPSLIICPPTLTGHWKQEIRTYAPFLTAVAYAGPPAERGKVRDQLATAD 1419
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YDI RN++ L + W+Y +LDEGHLIKNP + +++ +
Sbjct: 1420 --VVITSYDIARNDADILTPIN------------WNYCVLDEGHLIKNPKAKVTQAVKRL 1465
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
PS HR+I+SGTPIQNN+ ELW+LF+F P LG K F++++ PI + +E+
Sbjct: 1466 PSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQDRFAKPIAASRFAKSSSKEQE 1525
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L++ F
Sbjct: 1526 AGALAIESLHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKKLFDDF 1577
Query: 582 LNSEI-VLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L G+P AL ++K+C+ P ++ K + D + SML +
Sbjct: 1578 TKKEAKSLQDMAGNPDKEAKQHIFQALQYMRKLCNSPAMVMKEGHKSYED-IQSMLAKDK 1636
Query: 633 AAL-----AEKLAMHIADVAEKDDFQEQH-DNISCKISFILSLLDKLIPEGHNVLIFSQT 686
++L A KL + D+ QH DN + D+ + + H LIF Q
Sbjct: 1637 SSLTDPKHAPKLTA-LRDLLVDCGIGVQHADNGGVPTA------DQAVSQ-HRALIFCQM 1688
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++MLN++++++ K G F R+DG+ + S R IVN F LLT+ VGGLGL
Sbjct: 1689 KEMLNMVEDTVLKKMLPGVTFSRLDGSIEPSKRQDIVNKFNSDPSIDCLLLTTSVGGLGL 1748
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1749 NLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLVTRGTLEEKILNLQRFK 1806
>gi|148692894|gb|EDL24841.1| mCG6355 [Mus musculus]
Length = 1330
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/505 (34%), Positives = 268/505 (53%), Gaps = 60/505 (11%)
Query: 330 DMGLGKTMQICGFL-AGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCV 388
D + ++ GFL LF + ++V P T++ W+KE ++ T
Sbjct: 463 DAEFDEGFKVPGFLFKKLFKFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGS 522
Query: 389 KTRQYE--LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
T + E ++ ++ GVL+T+Y +R + D+ D W Y+ILDEGH
Sbjct: 523 YTHKKERLIRDIVYCHGVLITSYSYIR----------LMQDDISRHD--WHYVILDEGHK 570
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
I+NP+ ++ QNNL+ELW+LF+F P LG F E++ +P
Sbjct: 571 IRNPNA---------------AVTLACKQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVP 615
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
I G +A + + A LR+ I PY LRR+K+ DV S +L KNE ++
Sbjct: 616 ITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKS------DVKMSLSLPDKNEQVL 669
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGM 624
+ RLT Q ++Y+ F++S+ V +G + L L+KIC+HP D+ G
Sbjct: 670 FCRLTDEQHKVYQNFIDSKAVYRILNGENQIFSGLVALRKICNHP---------DLFSG- 719
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
P++A+ + D E++ F H S K+ + SLL +G VL+FS
Sbjct: 720 ----GPKNASGPPE------DELEEEQFG--HWRRSGKMIVVESLLKIWHRQGQRVLLFS 767
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
Q+R+ML++++ + + Y +L++DGTT + R ++ + E +FLLT++VGGLG+
Sbjct: 768 QSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFLLTTRVGGLGVN 827
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
LT A+RVI+ DP WNPSTD Q+ +RA+RIGQKK V VYRL+T GT+EEKIY +QIFK L
Sbjct: 828 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 887
Query: 805 FKTATEHKEQIRYFSQQDLRELLSL 829
+ +Q R+F DL EL +L
Sbjct: 888 TNRVLKDPKQRRFFKSNDLYELFTL 912
>gi|171686228|ref|XP_001908055.1| hypothetical protein [Podospora anserina S mat+]
gi|170943075|emb|CAP68728.1| unnamed protein product [Podospora anserina S mat+]
Length = 1895
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 281/540 (52%), Gaps = 67/540 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H+R
Sbjct: 1295 FRIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTICIVASDHHNRAEE 1354
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ A + Y G + + ++ L +
Sbjct: 1355 YAKTGSPDVRRLPSLIVCPPTLSGHWQQEIKAYAPFLSVTAYVGPPAERKA--MKDTLDE 1412
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ + + + W+Y++LDEGHLIKNP ++ + ++ +
Sbjct: 1413 TDIVITSYDVCRNDIEIIEKYN------------WNYVVLDEGHLIKNPKSKLSMAVKRL 1460
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F++++ PI + A +E+
Sbjct: 1461 ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFQDRFAKPIANSRNSKASSKEQE 1520
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q +L+E F
Sbjct: 1521 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQLKLFEDF 1572
Query: 582 LNSEIVLSAFDGSP---------LAALTILKKICDHPLLLTK---RAAEDVLDGM----D 625
E + AL ++K+C+ P L+ K RA +D +
Sbjct: 1573 TKKEAKTITEEAGRDDKEAKQHIFQALQYMRKLCNSPALVMKPGHRAYDDTQKFLARQGT 1632
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQ 685
S+ +P A L + + + QE D + I + H LIF Q
Sbjct: 1633 SLEDPAHAPKLTALRDLLVECGIGVEGQESSDPLYTPI------------KPHRALIFCQ 1680
Query: 686 TRKMLNLIQESIGSKGY----KFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
++ML+++Q ++ KG ++LR+DG+ +A+ R IVN F + LLT+ VGGL
Sbjct: 1681 MKEMLDMVQNTV-LKGMLPSTQYLRLDGSVEANRRQDIVNKFNSDPSYDVLLLTTSVGGL 1739
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1740 GLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFK 1799
>gi|340522000|gb|EGR52233.1| predicted protein [Trichoderma reesei QM6a]
Length = 1885
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 184/540 (34%), Positives = 278/540 (51%), Gaps = 67/540 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1285 FQIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRQEE 1344
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ + Y G + + ++ L D
Sbjct: 1345 FAKTQAPDVRRLPSLIVCPPTLSGHWQQEIKTYAPFLSVTAYVGPPAERKA--MKDKLGD 1402
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+S L + W+Y++LDEGHLIKNP + +++ +
Sbjct: 1403 TDIVITSYDVTRNDSDVLEKHN------------WNYVVLDEGHLIKNPKAKITQAVKRL 1450
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1451 SSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRYSKASSKEQE 1510
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1511 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKKLFEDF 1562
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP-- 630
+ + A G AL ++K+C+ P ++ K+ + DV + +L
Sbjct: 1563 TKKQGKKIQAEAGRDDKEAKQHIFQALQYMRKLCNSPAMVMKQGS-DVYNETQKILQKQG 1621
Query: 631 ---EDAALAEKLAM---HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
ED A KL + D DD E +D + I + H LIF
Sbjct: 1622 TSIEDPVHAPKLTALKDLLIDCGIGDDKDESNDPLYQPI------------KPHRALIFC 1669
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q ++ML+++Q + + +LR+DG+ +A+ R IVN F + LLT+ VGGL
Sbjct: 1670 QMKEMLDMVQNKVLKEMLPSVSYLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGL 1729
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1730 GLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFK 1789
>gi|121702625|ref|XP_001269577.1| TBP associated factor (Mot1), putative [Aspergillus clavatus NRRL 1]
gi|119397720|gb|EAW08151.1| TBP associated factor (Mot1), putative [Aspergillus clavatus NRRL 1]
Length = 1901
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 190/538 (35%), Positives = 273/538 (50%), Gaps = 62/538 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L P+Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1301 FQIPVAIKAELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHLRAEE 1360
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P +L HW +EL K Y G + LQ +L D
Sbjct: 1361 YAQSQKPEVRKLPSLIVCPPSLSGHWQQELKQYAPFLKSVAYVGP--PAERSRLQSMLPD 1418
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+++ L + W+Y +LDEGHLIKNP + ++ ++
Sbjct: 1419 ADIVVTSYDICRNDNEVLNPIN------------WNYCVLDEGHLIKNPKAKVTIAVKQL 1466
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1467 LSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1526
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + QR+L+E F
Sbjct: 1527 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKIIQNYYCDPSELQRKLFEDF 1578
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTKRA------AEDVLDGMDS 626
E L GS AL ++++C+ P L+ K + L S
Sbjct: 1579 TKKEQKALQDKVGSSEKSDKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQQYLTAKHS 1638
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQT 686
+ D A A KL A +D + + LS + P H LIF Q
Sbjct: 1639 QI--RDVAHAPKLG------ALRDLLVDCGIGVDPPSEGDLSSASYVSP--HRALIFCQM 1688
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K +FLR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1689 KEMLDIVQSEVFKKLLPSVQFLRLDGSVEATKRQDIVNRFNTDPSYDVLLLTTSVGGLGL 1748
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1749 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1806
>gi|296825556|ref|XP_002850834.1| transcriptional accessory protein [Arthroderma otae CBS 113480]
gi|238838388|gb|EEQ28050.1| transcriptional accessory protein [Arthroderma otae CBS 113480]
Length = 1905
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 197/590 (33%), Positives = 296/590 (50%), Gaps = 63/590 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1306 FQIPVGIKAELRSYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1365
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P ++ HW +E+ Y G + +++ +L
Sbjct: 1366 FAKTQAPEVRRLPSLIICPPSVSGHWQQEIKQYAPFISCVAYMGP--PGERAKVRPLLDS 1423
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YDI RN+S+ L S W+Y +LDEGHLIKNP + ++ I
Sbjct: 1424 VDVVITSYDICRNDSEVLTNIS------------WNYCVLDEGHLIKNPKAKITLAVKSI 1471
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F E++ PI + +E+
Sbjct: 1472 VSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKIFLERFAKPIAASRFSKSSSKEQE 1531
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E F
Sbjct: 1532 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFEDF 1583
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E ++ GS AL ++++C+ P L+ K + + +L ++
Sbjct: 1584 TQKEQKDIANKVGSSEKEAKEHIFQALQYMRRLCNSPALVMKEGHKQY-HQVQKLLASKN 1642
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKLIPEG-----HNVLIFSQT 686
+ HI D+A D I C I S +L H LIF Q
Sbjct: 1643 S--------HIRDIAHAPKLSALRDLLIDCGIGVDPSAEGELATGASYVSPHRALIFCQM 1694
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K +FLR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1695 KEMLDIVQNDVLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGL 1754
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1755 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1814
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNM 853
+ T+T +Q S D +LL L G ++ + G++ +M
Sbjct: 1815 V--TSTVVNQQNAGLSTMDTDQLLDLFNLGETADSAEKPTQDGTGNEIDM 1862
>gi|378728247|gb|EHY54706.1| adenosinetriphosphatase [Exophiala dermatitidis NIH/UT8656]
Length = 1904
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 186/538 (34%), Positives = 276/538 (51%), Gaps = 63/538 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ G+L DDMGLGKT+Q +A H R +
Sbjct: 1308 FQIPVAIKAELRSYQQEGVNWLAFLNKYNLHGVLCDDMGLGKTLQTLCIVASDHHMRAEE 1367
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ Y G ++ R L ++L+
Sbjct: 1368 YAKTKAPDMRRLPSLIVCPPTLSGHWQQEIKQYAPFLSCVAYVGNPME-RNSRL-HLLEQ 1425
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YD+ RN++ L + W+Y +LDEGHLIKNP + +++ ++
Sbjct: 1426 ADVVITSYDVCRNDNDVLAPIT------------WNYCVLDEGHLIKNPKAKITQAVKKL 1473
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F++++ PI + + +E+
Sbjct: 1474 VSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQDRFAKPIAASRNAKSSSKEQE 1533
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1534 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKRLFEDF 1585
Query: 582 LNSEI-----VLSAFDGSP----LAALTILKKICDHPLLLTKRAAEDV------LDGMDS 626
E + A D AL ++K+C+ P L+ K + L S
Sbjct: 1586 FKKERKTVENSIGAADKEAKQHIFQALQYMRKLCNSPALVVKEGTKQYETISKQLAASKS 1645
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQT 686
L D A A KL + D+ +D+ S +S H LIF Q
Sbjct: 1646 SL--RDVAHAPKLTA-LRDLLVDCGIGVSNDSNEMSASNYVS--------QHRALIFCQM 1694
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + +K +FLR+DG+ +A+ R IVN F LLT+ VGGLGL
Sbjct: 1695 KEMLDMVQNEVLAKLLPSVQFLRLDGSVEATKRQNIVNQFNNDPSYDCLLLTTSVGGLGL 1754
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1755 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMSLQRFK 1812
>gi|70990968|ref|XP_750333.1| TBP associated factor (Mot1) [Aspergillus fumigatus Af293]
gi|66847965|gb|EAL88295.1| TBP associated factor (Mot1), putative [Aspergillus fumigatus Af293]
Length = 1891
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 191/539 (35%), Positives = 272/539 (50%), Gaps = 64/539 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L P+Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1294 FKIPVAIKAELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHMRAEE 1353
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P +L HW +EL Y G + LQ L +
Sbjct: 1354 FARTQKPEVRKLPSLIVCPPSLSGHWQQELKQYAPFLNCVAYVGP--PAERSRLQSALPN 1411
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+++ L + W+Y +LDEGHLIKNP + ++ +
Sbjct: 1412 ADIVVTSYDICRNDNEVLNPIN------------WNYCVLDEGHLIKNPKAKATIAVKRL 1459
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1460 LSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1519
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + QR+L+E F
Sbjct: 1520 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKIIQNYYCDPSELQRKLFEDF 1571
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L GS AL ++++C+ P L+ K + N
Sbjct: 1572 TKKEQKALQDKVGSTEKADKEHIFQALQYMRRLCNSPALVVKEGHKQY--------NEVQ 1623
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISF------ILSLLDKLIPEGHNVLIFSQ 685
LA K + +I DVA D I C I LS + P H LIF Q
Sbjct: 1624 QYLAAKHS-NIRDVAHAPKLSALRDLLIDCGIGVDSPSEGDLSGASYVSP--HRALIFCQ 1680
Query: 686 TRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML+++Q + +K +FLR+DG+ +A+ R IVN F + LLT+ VGGLG
Sbjct: 1681 MKEMLDIVQSEVFNKLLPSVQFLRLDGSVEATRRQDIVNRFNTDPSYDVLLLTTSVGGLG 1740
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
L LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1741 LNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1799
>gi|159130807|gb|EDP55920.1| TBP associated factor (Mot1), putative [Aspergillus fumigatus A1163]
Length = 1891
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 191/539 (35%), Positives = 272/539 (50%), Gaps = 64/539 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L P+Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1294 FKIPVAIKAELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHMRAEE 1353
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P +L HW +EL Y G + LQ L +
Sbjct: 1354 FARTQKPEVRKLPSLIVCPPSLSGHWQQELKQYAPFLNCVAYVGP--PAERSRLQSALPN 1411
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+++ L + W+Y +LDEGHLIKNP + ++ +
Sbjct: 1412 ADIVVTSYDICRNDNEVLNPIN------------WNYCVLDEGHLIKNPKAKATIAVKRL 1459
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1460 LSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1519
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + QR+L+E F
Sbjct: 1520 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKIIQNYYCDPSELQRKLFEDF 1571
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L GS AL ++++C+ P L+ K + N
Sbjct: 1572 TKKEQKALQDKVGSTEKADKEHIFQALQYMRRLCNSPALVVKEGHKQY--------NEVQ 1623
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISF------ILSLLDKLIPEGHNVLIFSQ 685
LA K + +I DVA D I C I LS + P H LIF Q
Sbjct: 1624 QYLAAKHS-NIRDVAHAPKLSALRDLLIDCGIGVDSPSEGDLSGASYVSP--HRALIFCQ 1680
Query: 686 TRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML+++Q + +K +FLR+DG+ +A+ R IVN F + LLT+ VGGLG
Sbjct: 1681 MKEMLDIVQSEVFNKLLPSVQFLRLDGSVEATRRQDIVNRFNTDPSYDVLLLTTSVGGLG 1740
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
L LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1741 LNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1799
>gi|145255017|ref|XP_001398836.1| TBP associated factor (Mot1) [Aspergillus niger CBS 513.88]
gi|134084423|emb|CAK97415.1| unnamed protein product [Aspergillus niger]
Length = 1895
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 199/590 (33%), Positives = 293/590 (49%), Gaps = 64/590 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LP I L P+Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1297 FQLPVAIKAELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHLRAEE 1356
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P +L HW +E+ Y G V+ + +LQ L D
Sbjct: 1357 YARTQSAEVRKLPSLIVCPPSLSGHWQQEVKQYAPFLNCVAYVGPPVE--RAKLQANLAD 1414
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ LR S W+Y +LDEGHLIKNP + ++ I
Sbjct: 1415 ADIVVTSYDICRNDNDVLRPIS------------WNYCVLDEGHLIKNPKAKVTVAVKRI 1462
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1463 ASNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRLSKSSSKEQE 1522
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + Q++L+E F
Sbjct: 1523 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKIIQNYYCDPSDLQKRLFEDF 1574
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L+ GS AL ++++C+ P L+ K + N
Sbjct: 1575 TKKEQKELANKLGSSEKSDKEHIFQALQYMRRLCNSPALVVKEGHKQY--------NEVQ 1626
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQT 686
L K + HI DV+ D + C I L H L+F Q
Sbjct: 1627 QYLTTKQS-HIRDVSHAPKLSALRDLLLDCGIGVDPPTEGDLGTGASYVSPHRALVFCQM 1685
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K ++LR+DG +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1686 KEMLDIVQSEVLRKLLPSVQYLRLDGGVEATKRQDIVNRFNSDPSYDVLLLTTSVGGLGL 1745
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1746 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1805
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNM 853
+ T +Q + D +LL L G + + ++ +E+ G++ +M
Sbjct: 1806 VASTVV--NQQNAGLNTMDTDQLLDLFNLG-ETADNAEKPNEQAGNEVDM 1852
>gi|325091990|gb|EGC45300.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus
H88]
Length = 1092
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 229/401 (57%), Gaps = 40/401 (9%)
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGD 495
W ILDEGH I+NP T E+ +AHR+I+SGTP+QNNL ELW+LF+F P LG
Sbjct: 402 WGCAILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFAFPMRLGT 461
Query: 496 NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSS 555
F+ ++E PI G +A + + + + A+ L++ I PY L+R K +V +
Sbjct: 462 LVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDV--------A 513
Query: 556 ATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLT 613
A L KK+E +++ +LT QR YEAFL S + S G L + +L+KIC+HP L
Sbjct: 514 ADLPKKSEQVLFCKLTKLQRSAYEAFLGSNEMSSILRGRREALYGIDMLRKICNHPDLA- 572
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
E L++K + + ++ S K+ + SLL+
Sbjct: 573 -----------------EHKVLSKKPSYNYGSASK-----------SGKMQVVKSLLELW 604
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSKG-YKFLRIDGTTKASDRVKIVNDFQEGDVAPIF 732
GH L+F+Q R ML++++ I S G +K+ R+DG T R K+V++F +F
Sbjct: 605 RDTGHKTLLFAQHRIMLDILERFIISMGGFKYQRMDGNTPIKFRQKMVDEFNNNPDIHVF 664
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LLT++VGGLG+ LT ADRVI+ DP WNPSTD Q+ +RA+R+GQK++V +YRLMT GT+EE
Sbjct: 665 LLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEE 724
Query: 793 KIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
KIY +QIFK L + +Q + F DL +L +L G
Sbjct: 725 KIYHRQIFKQFLTNKILKDPKQRQTFQMSDLHDLFTLGNDG 765
>gi|295670740|ref|XP_002795917.1| TATA-binding protein-associated factor MOT1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226284050|gb|EEH39616.1| TATA-binding protein-associated factor MOT1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1906
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 195/588 (33%), Positives = 292/588 (49%), Gaps = 69/588 (11%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL- 351
++ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1304 SFEIPVAIKAELRSYQQEGVNWLAFLNRYHLHGILCDDMGLGKTLQTLCIVASDHHMRAE 1363
Query: 352 ---------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
KR +L++ P TL HW +E+ Y G + L+ L
Sbjct: 1364 EFARTGAPEAKRLPSLIICPPTLSGHWQQEIKQYAPFLSCLAYVGP--PAERARLRSSLD 1421
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++T+YDI RN++ + R + W+Y +LDEGHLIKNP + +++
Sbjct: 1422 SVDIVITSYDICRNDNDTFRPLN------------WNYCVLDEGHLIKNPKAKITRAVKC 1469
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1470 LKSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQ 1529
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E
Sbjct: 1530 EAGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFED 1581
Query: 581 FLNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
F E ++ GS AL ++++C+ P L+ K + + S+
Sbjct: 1582 FTKKEQKDIAKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKENHKRYNEIQKSL---- 1637
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQ 685
E HI DVA D + C I S +L H L+F Q
Sbjct: 1638 -----EAKNSHIRDVAHAPKLSALRDLLVDCGIGVDPSTEGELDTGVNYVSPHRALVFCQ 1692
Query: 686 TRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML+++Q + K ++LR+DG+ +A+ R IVN F + LLT+ VGGLG
Sbjct: 1693 MKEMLDIVQNDVFKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLG 1752
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
L LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1753 LNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKI 1812
Query: 803 GLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQ--QLHEEHG 848
+ T +Q S D +LL L F++ T + ++H + G
Sbjct: 1813 DVASTVV--NQQNAGLSTMDTDQLLDL----FNLGETAEGAEMHSQDG 1854
>gi|350630649|gb|EHA19021.1| hypothetical protein ASPNIDRAFT_211990 [Aspergillus niger ATCC 1015]
Length = 1894
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 199/590 (33%), Positives = 293/590 (49%), Gaps = 64/590 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LP I L P+Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1298 FQLPVAIKAELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHLRAEE 1357
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P +L HW +E+ Y G V+ + +LQ L D
Sbjct: 1358 YARTQSAEVRKLPSLIVCPPSLSGHWQQEVKQYAPFLNCVAYVGPPVE--RAKLQANLAD 1415
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ LR S W+Y +LDEGHLIKNP + ++ I
Sbjct: 1416 ADIVVTSYDICRNDNDVLRPIS------------WNYCVLDEGHLIKNPKAKVTVAVKRI 1463
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1464 ASNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1523
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + Q++L+E F
Sbjct: 1524 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKIIQNYYCDPSDLQKRLFEDF 1575
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L+ GS AL ++++C+ P L+ K + N
Sbjct: 1576 TKKEQKELANKLGSSEKSDKEHIFQALQYMRRLCNSPALVVKEGHKQY--------NEVQ 1627
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQT 686
L K + HI DV+ D + C I L H L+F Q
Sbjct: 1628 QYLTTKQS-HIRDVSHAPKLSALRDLLLDCGIGVDPPTEGDLGTGASYVSPHRALVFCQM 1686
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K ++LR+DG +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1687 KEMLDIVQSEVLRKLLPSVQYLRLDGGVEATKRQDIVNRFNSDPSYDVLLLTTSVGGLGL 1746
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1747 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1806
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNM 853
+ T +Q + D +LL L G + + ++ +E+ G++ +M
Sbjct: 1807 VASTVV--NQQNAGLNTMDTDQLLDLFNLG-ETADNAEKPNEQAGNEVDM 1853
>gi|358366764|dbj|GAA83384.1| TBP associated factor [Aspergillus kawachii IFO 4308]
Length = 1895
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 199/590 (33%), Positives = 293/590 (49%), Gaps = 64/590 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LP I L P+Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1297 FQLPVAIKAELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHLRADE 1356
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P +L HW +E+ Y G V+ + +LQ L D
Sbjct: 1357 YARTQSAEVRKLPSLIVCPPSLSGHWQQEVKQYAPFLNCVAYVGPPVE--RAKLQGNLAD 1414
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ LR S W+Y +LDEGHLIKNP + ++ I
Sbjct: 1415 ADIVVTSYDICRNDNDVLRPIS------------WNYCVLDEGHLIKNPKAKVTVAVKRI 1462
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1463 ASNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1522
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + Q++L+E F
Sbjct: 1523 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKIIQNYYCDPSDLQKRLFEDF 1574
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L+ GS AL ++++C+ P L+ K + N
Sbjct: 1575 TKKEQKELANKLGSSEKSDKEHIFQALQYMRRLCNSPALVVKEGHKQY--------NEVQ 1626
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQT 686
L K + HI DV+ D + C I L H L+F Q
Sbjct: 1627 QYLTTKQS-HIRDVSHAPKLSALRDLLLDCGIGVDPPTEGDLGTGASYVSPHRALVFCQM 1685
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K ++LR+DG +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1686 KEMLDIVQSEVLRKLLPSVQYLRLDGGVEATKRQDIVNRFNSDPSYDVLLLTTSVGGLGL 1745
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1746 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1805
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNM 853
+ T +Q + D +LL L G + + ++ +E+ G++ +M
Sbjct: 1806 VASTVV--NQQNAGLNTMDTDQLLDLFNLG-ETADNAEKPNEQAGNEVDM 1852
>gi|68486386|ref|XP_712928.1| hypothetical protein CaO19.4502 [Candida albicans SC5314]
gi|68486451|ref|XP_712896.1| hypothetical protein CaO19.11978 [Candida albicans SC5314]
gi|46434315|gb|EAK93728.1| hypothetical protein CaO19.11978 [Candida albicans SC5314]
gi|46434350|gb|EAK93762.1| hypothetical protein CaO19.4502 [Candida albicans SC5314]
Length = 1915
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 193/580 (33%), Positives = 292/580 (50%), Gaps = 64/580 (11%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
++ LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q ++ H R
Sbjct: 1291 SFDLPVTIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVSSDHHIREE 1350
Query: 353 K------------RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
+LV+ P +L+ HW +E+ K+ Y G+ + + L+ +
Sbjct: 1351 NFKETGSAEYRKLPSLVICPPSLIGHWEQEINQYAPFMKVLVYAGS--PSIRIPLRGQIP 1408
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
D V++T+YD+ RN+ +SL + +Y +LDEGH+IKN S++ +KS+
Sbjct: 1409 DADVVVTSYDVCRNDVESLTKHDY------------NYCVLDEGHIIKNASSKLSKSVKR 1456
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ + HR+I+SGTPIQNN+ ELW+LF+F P LG K F EK+ PI + +E+
Sbjct: 1457 VKAEHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQ 1516
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK +V + L K + L+ Q++LY+
Sbjct: 1517 EAGALAMESLHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSDLQKKLYKD 1568
Query: 581 FLNS--EIVLSAFDGSP-------LAALTILKKICDHPLLLTK----RAAED---VLDGM 624
F + E + + GS AL ++K+C+HP L+ + AE ++
Sbjct: 1569 FAKTQKETIKTDVQGSEKEGKTHVFQALQYMRKLCNHPALVMSEQHPKYAEINQFLISRN 1628
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-----HN 679
+ N E A L + + E ++N+S K S +LI H
Sbjct: 1629 TDLRNIEHAPKLLSLKNLLLECGIGSQDSEYNNNVSKKKSLQQQQQQQLISADGVISEHR 1688
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML++++ + K F+R+DG+T DR IV F E + LLT+
Sbjct: 1689 ALIFCQLKDMLDIVENELLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNEDPSIDVLLLTT 1748
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+VGGLGL LT AD VI V+ WNP D Q++DRA+R+GQKK V VYRL+T T+EEKI
Sbjct: 1749 KVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRLITKDTLEEKIMG 1808
Query: 797 KQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDV 836
Q FK + T +Q D +LL L FDV
Sbjct: 1809 LQKFKMNIASTIV--NQQNAGLQSMDTNQLLDL----FDV 1842
>gi|358398626|gb|EHK47977.1| hypothetical protein TRIATDRAFT_133110 [Trichoderma atroviride IMI
206040]
Length = 1890
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 183/540 (33%), Positives = 278/540 (51%), Gaps = 67/540 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1290 FQIPVAIKAELRSYQQDGVNWLNFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRQEE 1349
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ + Y G ++ + ++ L D
Sbjct: 1350 FAKTQAPDVRRLPSLIVCPPTLSGHWQQEIKTYAPFLSVTAYVGPPIERKA--MKDRLGD 1407
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+S+ L S W+Y++LDEGHLIKNP + +++ +
Sbjct: 1408 TDIVITSYDVTRNDSEILEKHS------------WNYVVLDEGHLIKNPKAKITQAVKRL 1455
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1456 ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRYSKASSKEQE 1515
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1516 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKKLFEDF 1567
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP-- 630
+ + A G AL ++K+C+ P ++ K D+ +L
Sbjct: 1568 TKKQGKKIQAEAGREDKEAKQHIFQALQYMRKLCNSPAMVMK-PGSDLYAETQKILQKQG 1626
Query: 631 ---EDAALAEKLAM---HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
EDA A KL + D DD + +D + I + H LIF
Sbjct: 1627 TSIEDAHHAPKLTALKDLLIDCGIGDDRDDANDPLYQPI------------KPHRALIFC 1674
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q ++ML+++Q + + +LR+DG+ +A+ R IVN F + LLT+ VGGL
Sbjct: 1675 QMKEMLDMVQTKVLKEMLPSVSYLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGL 1734
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1735 GLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFK 1794
>gi|226288690|gb|EEH44202.1| TATA-binding protein-associated factor MOT1 [Paracoccidioides
brasiliensis Pb18]
Length = 1912
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 192/567 (33%), Positives = 281/567 (49%), Gaps = 63/567 (11%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL- 351
++ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1310 SFEIPVAIKAELRSYQQEGVNWLAFLNRYHLHGILCDDMGLGKTLQTLCIVASDHHMRAE 1369
Query: 352 ---------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
KR +L++ P TL HW +E+ Y G + L+ L
Sbjct: 1370 EFARTGAPEAKRLPSLIICPPTLSGHWQQEIKQYAPFLSCLAYVGP--PAERARLRGSLD 1427
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++T+YDI RN++ + R + W+Y +LDEGHLIKNP + +++
Sbjct: 1428 SVDIVITSYDICRNDNDTFRPLN------------WNYCVLDEGHLIKNPKAKITRAVKC 1475
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1476 LKSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQ 1535
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E
Sbjct: 1536 EAGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFED 1587
Query: 581 FLNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
F E ++ GS AL ++++C+ P L+ K + E
Sbjct: 1588 FTKKEQKDIAKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKENHKRY---------NE 1638
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQ 685
L E HI DVA D + C I S +L H L+F Q
Sbjct: 1639 IQKLLEAKNSHIRDVAHAPKLSALRDLLVDCGIGVDPSTEGELDTGANYVSPHRALVFCQ 1698
Query: 686 TRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML+++Q + K ++LR+DG+ +A+ R IVN F + LLT+ VGGLG
Sbjct: 1699 MKEMLDIVQNDVFKKLLPSVQYLRLDGSVEAAKRQNIVNQFNTDPSYDVLLLTTSVGGLG 1758
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
L LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1759 LNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKI 1818
Query: 803 GLFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D +LL L
Sbjct: 1819 DVASTVV--NQQNAGLSTMDTDQLLDL 1843
>gi|119496623|ref|XP_001265085.1| TBP associated factor (Mot1), putative [Neosartorya fischeri NRRL
181]
gi|119413247|gb|EAW23188.1| TBP associated factor (Mot1), putative [Neosartorya fischeri NRRL
181]
Length = 1920
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 191/539 (35%), Positives = 271/539 (50%), Gaps = 64/539 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L P+Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1323 FKIPVAIKAELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHLRAEE 1382
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P +L HW +EL Y G + LQ L +
Sbjct: 1383 FARTQKPEVRKLPSLIVCPPSLSGHWQQELKQYAPFLNCVAYVGP--PAERSRLQSALPN 1440
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+++ L + W+Y +LDEGHLIKNP + ++ +
Sbjct: 1441 ADIVVTSYDICRNDNEVLNPIN------------WNYCVLDEGHLIKNPKAKVTIAVKRL 1488
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1489 LSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1548
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + QR+L+E F
Sbjct: 1549 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKIIQNYYCDPSELQRKLFEDF 1600
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L GS AL ++++C+ P L+ K + N
Sbjct: 1601 TKKEQKALQDKVGSTEKSDKEHIFQALQYMRRLCNSPALVVKEGHKQY--------NEVQ 1652
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISF------ILSLLDKLIPEGHNVLIFSQ 685
LA K + +I DVA D I C I LS + P H LIF Q
Sbjct: 1653 QYLAAKHS-NIRDVAHAPKLSALRDLLIDCGIGVDSPSEGDLSGASYVSP--HRALIFCQ 1709
Query: 686 TRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML+++Q + K +FLR+DG+ +A+ R IVN F + LLT+ VGGLG
Sbjct: 1710 MKEMLDIVQSEVLKKLLPSVQFLRLDGSVEATKRQDIVNRFNTDPSYDVLLLTTSVGGLG 1769
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
L LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1770 LNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1828
>gi|225681546|gb|EEH19830.1| modifier of transcription [Paracoccidioides brasiliensis Pb03]
Length = 1912
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 191/567 (33%), Positives = 281/567 (49%), Gaps = 63/567 (11%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL- 351
++ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1310 SFEIPVAIKAELRSYQQEGVNWLAFLNRYHLHGILCDDMGLGKTLQTLCIVASDHHMRAE 1369
Query: 352 ---------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
KR +L++ P TL HW +E+ Y G + L+ L
Sbjct: 1370 EFARTGAPEAKRLPSLIICPPTLSGHWQQEIKQYAPFLSCLAYVGP--PAERARLRVSLD 1427
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++T+YDI RN++ + R + W+Y +LDEGHLIKNP + +++
Sbjct: 1428 SVDIVITSYDICRNDNDTFRPLN------------WNYCVLDEGHLIKNPKAKITRAVKC 1475
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1476 LKSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQ 1535
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E
Sbjct: 1536 EAGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFED 1587
Query: 581 FLNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
F E ++ GS AL ++++C+ P L+ K + E
Sbjct: 1588 FTKKEQKDIAKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKENHKRY---------NE 1638
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQ 685
L E HI DVA D + C I S +L H L+F Q
Sbjct: 1639 IQKLLEAKNSHIRDVAHAPKLSALRDLLVDCGIGVDPSTEGELDTGANYVSPHRALVFCQ 1698
Query: 686 TRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML+++Q + + ++LR+DG+ +A+ R IVN F + LLT+ VGGLG
Sbjct: 1699 MKEMLDIVQNDVFKRLLPSVQYLRLDGSVEAAKRQNIVNQFNTDPSYDVLLLTTSVGGLG 1758
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
L LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1759 LNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKI 1818
Query: 803 GLFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D +LL L
Sbjct: 1819 DVASTVV--NQQNAGLSTMDTDQLLDL 1843
>gi|326923770|ref|XP_003208107.1| PREDICTED: TATA-binding protein-associated factor 172-like [Meleagris
gallopavo]
Length = 2308
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 290/590 (49%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-------- 345
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG
Sbjct: 1714 YKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAQE 1773
Query: 346 LFHSRLIKR----ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++L+ +LVV P TL HW+ E+ + T T + LQY ++
Sbjct: 1774 YARTKLVDSVPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQYQVKR 1833
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1834 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1881
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1882 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1941
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1942 AGVLAMEALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCVLSPLQVQLYEDF 1993
Query: 582 LNS-------EIVLS------------AFDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V S G AL L+K+C+HP L+LT +
Sbjct: 1994 AKSRAKCDIDETVSSISLREETEKPKLKATGHVFQALQYLRKLCNHPALVLTTQ------ 2047
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + E+LA H + + + QH + K+S + LL
Sbjct: 2048 -------HPEYKRITEQLAAHNSSLRDI-----QH---APKLSALKQLLLDCGLGNGGSS 2092
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ A R IV+ F
Sbjct: 2093 ESGTEAVVAQHRILIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQRHSIVSQFN 2152
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 2153 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 2212
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ + L +L +L K G
Sbjct: 2213 ITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTEQLLDLFTLDKDG 2262
>gi|406603793|emb|CCH44714.1| TATA-binding protein-associated factor [Wickerhamomyces ciferrii]
Length = 1887
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 198/602 (32%), Positives = 294/602 (48%), Gaps = 91/602 (15%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL---- 351
LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1283 LPVAIDATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVASDHHLRAEDYK 1342
Query: 352 ----IKRA----LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG 403
I+ A L++ P +L HW +E K+ Y G + + ++ L
Sbjct: 1343 VTKSIETAPLPTLIICPPSLTGHWEQEFNQYSPFLKVVVYAGG--PSFRSGIRPQLNSCD 1400
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
+++T+YD+VRN+ + L + +Y +LDEGH+IKN +++ KS+ + S
Sbjct: 1401 IIVTSYDVVRNDVEFLSAKDY------------NYCVLDEGHIIKNAASKLTKSVKRVRS 1448
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
HR+I+SGTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+ G
Sbjct: 1449 NHRLILSGTPIQNNVLELWSLFDFLMPGFLGSEKLFQERFARPIAASRNSKTSSKEQEAG 1508
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
+ + L +++ P+ LRRLK EV + L K + +L+ Q+QLY+ F
Sbjct: 1509 ALALEALHKQVLPFMLRRLKEEVLSD--------LPPKIIQDYYCQLSDLQKQLYKDFAK 1560
Query: 584 SE--IVLSAFDGSPLA--------ALTILKKICDHPLLLTKRAAEDVLDGM----DSMLN 629
+ IV + +A AL ++K+C+HP L+ + + D+ ++
Sbjct: 1561 KQKTIVENDIQTVEVAEKKTHIFQALQYMRKLCNHPSLVLSESHPQYYEVQKYLRDTRMS 1620
Query: 630 PEDAALAEKL----------AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
D A KL + ADV + + Q + IS H
Sbjct: 1621 IHDIHHAPKLMALRTLLLECGIGTADVEKSNSAQNTGNVIS----------------QHR 1664
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
L+F Q + ML++++ + K F+R+DG+T DR IV F E + LLT+
Sbjct: 1665 ALVFCQLKDMLDMVENDLLKKYLPSVSFMRLDGSTDPRDRQGIVRKFNEDPSIDVLLLTT 1724
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+VGGLGL LT AD VI V+ WNP D Q++DRA+R+GQKK V VYRL+T T+EEKI
Sbjct: 1725 KVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRLITKDTLEEKIMG 1784
Query: 797 KQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDES 856
Q FK + T +Q S D +LL L FDV E+HG Q
Sbjct: 1785 LQKFKMNIASTIVS--QQNAGLSSMDTNQLLDL----FDV--------EQHGQQEEHVSE 1830
Query: 857 LE 858
LE
Sbjct: 1831 LE 1832
>gi|367049550|ref|XP_003655154.1| hypothetical protein THITE_2118518 [Thielavia terrestris NRRL 8126]
gi|347002418|gb|AEO68818.1| hypothetical protein THITE_2118518 [Thielavia terrestris NRRL 8126]
Length = 1895
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 279/541 (51%), Gaps = 69/541 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1295 FQIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRAEE 1354
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ + Y G + R ++ +L
Sbjct: 1355 FAKTGAPEVRRLPSLIVCPPTLSGHWQQEIRTYAPFLSVTAYVGPPAERRA--MKDMLDK 1412
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ + + + W+Y++LDEGHLIKNP + ++ +
Sbjct: 1413 TDIVITSYDVCRNDIEIIEKYN------------WNYVVLDEGHLIKNPKAKITLAVKRL 1460
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1461 TSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIANSRYSKASSKEQE 1520
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV DD L K + L+ QR+L+E F
Sbjct: 1521 AGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSDLQRKLFEDF 1572
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTK---RAAEDV---LDGMDS 626
E +S G AL ++K+C+ P L+ K RA E+ L ++
Sbjct: 1573 TKREGKRISEEAGRDDKEAKQHIFQALQYMRKLCNSPALVMKPGHRAYEETQKFLARQNT 1632
Query: 627 MLNPEDAALAEKLAM---HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIF 683
L ED A A KL + D + QE D + + + H LIF
Sbjct: 1633 SL--EDPAHAPKLTALRDLLVDCGIGVEGQESSDPLYTPV------------KPHRALIF 1678
Query: 684 SQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
Q ++ML+++Q ++ ++LR+DG+ +A+ R IVN F + LLT+ VGG
Sbjct: 1679 CQMKEMLDMVQNTVLKSMLPSVQYLRLDGSVEANRRQDIVNKFNSDPSYDVLLLTTSVGG 1738
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q F
Sbjct: 1739 LGLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRF 1798
Query: 801 K 801
K
Sbjct: 1799 K 1799
>gi|336470118|gb|EGO58280.1| hypothetical protein NEUTE1DRAFT_63999 [Neurospora tetrasperma FGSC
2508]
gi|350290188|gb|EGZ71402.1| hypothetical protein NEUTE2DRAFT_157615 [Neurospora tetrasperma FGSC
2509]
Length = 1893
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 271/539 (50%), Gaps = 65/539 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1292 FQIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRAEE 1351
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ +R Y G + + ++ L
Sbjct: 1352 FAKTGAPDVRRLPSLIVCPPTLSGHWQQEIKNYAPFLSVRTYVGPPAERKA--MKDTLDK 1409
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ ++ S W+Y++LDEGHLIKNP + ++ ++
Sbjct: 1410 TDIVITSYDVCRNDIDVIKKYS------------WNYVVLDEGHLIKNPKAKITIAVKQL 1457
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1458 ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIANSRYSKASSKEQE 1517
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E F
Sbjct: 1518 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFEDF 1569
Query: 582 LNSE---IVLSA------FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSM----L 628
E I A AL ++K+C+ P L+ K + D +
Sbjct: 1570 TKREAKKITEEAGRDDKEAKAHIFQALQYMRKLCNSPALVMKPGHKQYDDTQKFLAKRNT 1629
Query: 629 NPEDAALAEKLAM---HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQ 685
+ ED A A KL + D + QE D + I + H LIF Q
Sbjct: 1630 SLEDPAHAPKLTALRDLLVDCGIGVEGQESSDPLYTPI------------KPHRALIFCQ 1677
Query: 686 TRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML+++Q ++ LR+DG+ + R IVN F + LLT+ VGGLG
Sbjct: 1678 MKEMLDMVQNTVLKTMLPSVSHLRLDGSVDPTRRQDIVNKFNSDPSYDVLLLTTSVGGLG 1737
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
L LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1738 LNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFK 1796
>gi|327280078|ref|XP_003224781.1| PREDICTED: TATA-binding protein-associated factor 172-like [Anolis
carolinensis]
Length = 2315
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1720 YKIPVPIKAELRKYQQEGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1779
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1780 YARTKIADSVPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHHVKR 1839
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1840 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAIKQL 1887
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1888 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1947
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1948 AGVLAMEALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSLLQVQLYEDF 1999
Query: 582 LNSEI------VLSAFD-------------GSPLAALTILKKICDHPLLLTKRAAEDVLD 622
S +SA G AL L+K+C+HP L+ +
Sbjct: 2000 AKSRAKCDVDETVSAVSLTEETEKTKLKATGHVFQALQYLRKLCNHPALVLTAS------ 2053
Query: 623 GMDSMLNPEDAALAEKLAMHIADVAEKDDFQE-QHDNISCKISFILSLL----------- 670
+PE + EKLA AE ++ QH + K+S + LL
Sbjct: 2054 ------HPEYKRITEKLA------AENSSLRDIQH---APKLSALKQLLLDCGLGNGGSS 2098
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ A R IV+ F
Sbjct: 2099 ENGTETVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSITYLRLDGSIPAGQRHSIVSRFN 2158
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 2159 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMKDLQAMDRAHRIGQKRVVNVYRL 2218
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 2219 ITRGTLEEKIMGLQKFKMNIANTVISQENTSLQSMGTDQLLDLFTLDKDG 2268
>gi|157134957|ref|XP_001663375.1| hypothetical protein AaeL_AAEL013189 [Aedes aegypti]
gi|108870352|gb|EAT34577.1| AAEL013189-PA [Aedes aegypti]
Length = 1904
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 274/535 (51%), Gaps = 68/535 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P +I L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LAG H R +
Sbjct: 1309 FKIPVEINADLRSYQQSGVNWLWFLNKYKLHGILCDDMGLGKTLQAICILAGDHHQRSLD 1368
Query: 354 R------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLT 407
+LV+ P TL HW+ E+ + +R + + L++ L +++
Sbjct: 1369 PKCAKLPSLVICPPTLTGHWVYEVEKFLPTRFLRPLHYVGLPVDRERLRHKLGTYNLIIA 1428
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
+Y+IVR + + F S W+Y +LDEGH+IKN T+ +K++ ++ + HR+
Sbjct: 1429 SYEIVRKDIE------FFSS------VHWNYCVLDEGHIIKNGRTKSSKAIKQLVANHRL 1476
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
I+SGTPIQNN+ ELW+LF+F P LG K F ++ PIL D + +E+ G+
Sbjct: 1477 ILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFSTRFSRPILASRDPKSSAKEQEAGALAM 1536
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF----LN 583
+ L ++ P+ LRR+K +V + L K + L+ Q +LYE F LN
Sbjct: 1537 EALHRQVLPFLLRRVKEDVLTD--------LPPKITQDLLCELSPLQERLYEDFSRMHLN 1588
Query: 584 SEI--VLSAFDGSPLA-------ALTILKKICDHPLLLTKRA---AEDVLDGMDSMLNPE 631
S+I L DG ++ AL L+ +C+HP L+ + + + +L + SM + E
Sbjct: 1589 SDIRECLENIDGQIVSKKTHVFQALRYLQNVCNHPKLVLQPSHPEYQTILSEISSMDDIE 1648
Query: 632 DAALAEKLAMHIAD--VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKM 689
+A L + D + +D H LIF Q + M
Sbjct: 1649 HSAKLPALKQLLLDCGIGTNEDMSVNQ---------------------HRALIFCQLKAM 1687
Query: 690 LNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLT 746
L++I+ + K +LR+DG+ S R +IV F + LLT+QVGGLGL LT
Sbjct: 1688 LDIIENDLLKKHLPAVSYLRLDGSVPPSSRHQIVTKFNGDPSIDVLLLTTQVGGLGLNLT 1747
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI Q FK
Sbjct: 1748 GADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRKSLEEKIMGLQKFK 1802
>gi|336268428|ref|XP_003348979.1| hypothetical protein SMAC_02000 [Sordaria macrospora k-hell]
gi|380094239|emb|CCC08456.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1872
Score = 275 bits (703), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 279/567 (49%), Gaps = 67/567 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1271 FQIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRAEE 1330
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ + Y G + + ++ VL +
Sbjct: 1331 FVKTGAPDVRRLPSLIVCPPTLSGHWQQEIKNYAPFLSVTTYVGPPAERKA--MKDVLDE 1388
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ + S W+Y++LDEGHLIKNP + ++ ++
Sbjct: 1389 TDIVITSYDVCRNDIDVINKYS------------WNYVVLDEGHLIKNPKAKITIAVKQL 1436
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1437 TSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIANSRYSKASSKEQE 1496
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E F
Sbjct: 1497 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFEDF 1548
Query: 582 LNSEIVLSAFDGSP---------LAALTILKKICDHPLLLTKRAAEDVLDGM-------D 625
E + AL ++K+C+ P L+ K + D
Sbjct: 1549 TKREAAKITEEAGRDDKEAKAHIFQALQYMRKLCNSPALVMKPGHKQYDDTQKFLAKRNT 1608
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQ 685
S+ +P A L + D + QE D + I + H LIF Q
Sbjct: 1609 SLEDPVHAPKLTALRDLLVDCGIGVEGQESSDPLYTPI------------KPHRALIFCQ 1656
Query: 686 TRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML+++Q ++ K LR+DG+ + R IVN F + LLT+ VGGLG
Sbjct: 1657 MKEMLDMVQNTVLKKMLPSVSHLRLDGSVDPTRRQDIVNKFNSDPSYDVLLLTTSVGGLG 1716
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
L LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1717 LNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKI 1776
Query: 803 GLFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D ++L L
Sbjct: 1777 DVASTVV--NQQNAGLSTMDTDQILDL 1801
>gi|392574226|gb|EIW67363.1| hypothetical protein TREMEDRAFT_64615 [Tremella mesenterica DSM 1558]
Length = 1892
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 274/535 (51%), Gaps = 59/535 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P K+ L +Q+EG+ WL L GIL DDMGLGK++Q +A H R +K
Sbjct: 1313 YEIPVKVNAELRGYQKEGVSWLAFLAKYQLHGILCDDMGLGKSIQTICIIASKIHERTVK 1372
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+ L+V P TL HW E+ + + EY GT ++ + L+ Q
Sbjct: 1373 HSQSHSTDSTPLPSLIVCPPTLTGHWYHEILKFVPTLRPLEYVGTSIQ--RSSLRSSFQS 1430
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +Y+ VR + I+D + D W Y +LDEGH+IKN T+ A+++ ++
Sbjct: 1431 HDIIIASYEGVRAD---------IADLSKID---WLYCVLDEGHIIKNAKTRLAEAVKKL 1478
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+++SGTPIQNN+ ELW+LF+F P LG + F +++ PIL + A +E+
Sbjct: 1479 KAQHRLLLSGTPIQNNVLELWSLFDFLMPGFLGSERVFNDRFSKPILADREGKATPKERE 1538
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
+ ++ + L +++ P+ LRRLK +V + L K + L+ Q+ LY+ F
Sbjct: 1539 LAASALEALHKQVLPFLLRRLKEDVLSD--------LPPKIIQDYHVELSPIQQALYDEF 1590
Query: 582 LNSEIVLSAFD-----------GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP 630
S+ A + G +L L+K+C+HP L+ + + ++
Sbjct: 1591 GRSQAAEEAGEAVQSQSAAPGQGHVFQSLQYLRKLCNHPALVLENEPQKFVE-------- 1642
Query: 631 EDAALAEKLAMHIADVAEKDDFQE-QHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKM 689
+ L + MH D++ + + + C I S + H +LIF Q R M
Sbjct: 1643 LERKLGKLAPMH--DISHSPKLEALRQLLLDCGIGLPPSEKISNDIDSHRILIFCQLRPM 1700
Query: 690 LNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLT 746
L+LI + K ++R+DGTT R IV F + LLT+ VGGLGL LT
Sbjct: 1701 LDLIANDLFGKLMPSVTYMRLDGTTDPRKRHAIVQTFNADPRIDVLLLTTSVGGLGLNLT 1760
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
AD VI VD WNP D Q++DRA+R+GQ+K V VYRL+T GT+EEKI Q FK
Sbjct: 1761 GADTVIFVDHDWNPMKDLQAMDRAHRLGQRKVVNVYRLITRGTLEEKIMGLQRFK 1815
>gi|302508605|ref|XP_003016263.1| hypothetical protein ARB_05661 [Arthroderma benhamiae CBS 112371]
gi|291179832|gb|EFE35618.1| hypothetical protein ARB_05661 [Arthroderma benhamiae CBS 112371]
Length = 1904
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 295/595 (49%), Gaps = 73/595 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1305 FQIPVGIKAELRSYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1364
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P ++ HW +E+ Y G + +++ +L
Sbjct: 1365 FAKTGAPEVRRLPSLIICPPSVSGHWQQEIKQYAPFISCVAYMGP--PAERAKVRPLLDT 1422
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+S L S W+Y +LDEGHLIKNP + ++ I
Sbjct: 1423 VDIVITSYDICRNDSDVLTSIS------------WNYCVLDEGHLIKNPKAKITLAVKSI 1470
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F E++ PI + +E+
Sbjct: 1471 VSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKIFLERFAKPIAASRFSKSSSKEQE 1530
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E F
Sbjct: 1531 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFEDF 1582
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRA------AEDVLDGMDS 626
E ++ GS AL ++++C+ P L+ K + +L +S
Sbjct: 1583 TQKEQKDIANKVGSSDKEAKEHIFQALQYMRRLCNSPALVMKEGHKQYHQVQKLLASKNS 1642
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-----HNVL 681
N D A A KL+ A +D I C I S +L H L
Sbjct: 1643 --NIRDIAHAPKLS------ALRDLL------IDCGIGVDPSAEGELATGASYVSPHRAL 1688
Query: 682 IFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
IF Q ++ML+++Q + K +FLR+DG+ +A+ R IVN F + LLT+ V
Sbjct: 1689 IFCQMKEMLDIVQNDVLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSV 1748
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q
Sbjct: 1749 GGLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQ 1808
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNM 853
FK + T +Q S D +LL L G ++ + G++ +M
Sbjct: 1809 RFKIDVASTVV--NQQNAGLSTMDTDQLLDLFNLGETADSAEKPTQDGAGNEIDM 1861
>gi|327307624|ref|XP_003238503.1| TBP associated factor Mot1 [Trichophyton rubrum CBS 118892]
gi|326458759|gb|EGD84212.1| TBP associated factor Mot1 [Trichophyton rubrum CBS 118892]
Length = 1903
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 295/595 (49%), Gaps = 73/595 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1304 FQIPVGIKAELRSYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1363
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P ++ HW +E+ Y G + +++ +L
Sbjct: 1364 FAKTGAPEVRRLPSLIICPPSVSGHWQQEIKQYAPFISCVAYMGP--PAERAKVRPLLDT 1421
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+S L S W+Y +LDEGHLIKNP + ++ I
Sbjct: 1422 VDIVITSYDICRNDSDVLTSIS------------WNYCVLDEGHLIKNPKAKITLAVKSI 1469
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F E++ PI + +E+
Sbjct: 1470 VSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKIFLERFAKPIAASRFSKSSSKEQE 1529
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E F
Sbjct: 1530 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFEDF 1581
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRA------AEDVLDGMDS 626
E ++ GS AL ++++C+ P L+ K + +L +S
Sbjct: 1582 TQKEQKDIANKVGSSDKEAKEHIFQALQYMRRLCNSPALVMKEGHKQYHQVQKLLASKNS 1641
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-----HNVL 681
N D A A KL+ A +D I C I S +L H L
Sbjct: 1642 --NIRDIAHAPKLS------ALRDLL------IDCGIGVDPSAEGELATGASYVSPHRAL 1687
Query: 682 IFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
IF Q ++ML+++Q + K +FLR+DG+ +A+ R IVN F + LLT+ V
Sbjct: 1688 IFCQMKEMLDIVQNDVLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSV 1747
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q
Sbjct: 1748 GGLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQ 1807
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNM 853
FK + T +Q S D +LL L G ++ + G++ +M
Sbjct: 1808 RFKIDVASTVV--NQQNAGLSTMDTDQLLDLFNLGETADSAEKPTQDGTGNEIDM 1860
>gi|406867761|gb|EKD20799.1| SNF2 family domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1886
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 273/541 (50%), Gaps = 66/541 (12%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL- 351
++ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H+R
Sbjct: 1286 SFSIPVAIKAELRSYQQEGVNWLNFLNKYHLHGILCDDMGLGKTLQTLCIVASDHHNRAE 1345
Query: 352 ---------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
++R +L+V P TL HW E+ Y G + LQ L
Sbjct: 1346 EYAKTKSPDVRRLPSLIVCPPTLSGHWQMEIKTYAPFLSCTAYVGP--PADRARLQDQLG 1403
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++T+YDI RN++ L + W+Y++LDEGHLIKNP + ++
Sbjct: 1404 KTDIVITSYDICRNDADLLTALN------------WNYLVLDEGHLIKNPRAKVTMAVKR 1451
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1452 LLSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRYSKSSSKEQ 1511
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK EV DD L K + L+ Q++L+E
Sbjct: 1512 EAGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSDLQKKLFED 1563
Query: 581 FLNSE---IVLSAFDGSPLA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
F E + A G A AL ++K+C+ P L+ K + D +L +
Sbjct: 1564 FTKKEGKTLAEKASSGDKEAKQHIFQALQYMRKLCNSPALVMKEGHKQY-DETQRLLAKQ 1622
Query: 632 DAALAEKLAMHIADVAEKDDF--------QEQHDNISCKISFILSLLDKLIPEGHNVLIF 683
+L + + H + D + D ++ + S++ H LIF
Sbjct: 1623 GTSLRDPV--HAPKLLALRDLLVDCGIGNEPAADEVTTETSYV---------SPHRALIF 1671
Query: 684 SQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
Q ++ML+++Q + K +FLR+DG+ AS R IVN F LLT+ VGG
Sbjct: 1672 CQMKEMLDMVQNDVLRKMLPSVQFLRMDGSVDASKRQDIVNKFNSDPSYDCLLLTTSVGG 1731
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q F
Sbjct: 1732 LGLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMSLQRF 1791
Query: 801 K 801
K
Sbjct: 1792 K 1792
>gi|346971617|gb|EGY15069.1| TATA-binding protein-associated factor MOT1 [Verticillium dahliae
VdLs.17]
Length = 1860
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 284/572 (49%), Gaps = 69/572 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q ++ H R
Sbjct: 1259 FKIPVAIKAELRSYQQDGVNWLNFLNKYHLHGILCDDMGLGKTLQTICMVSSDHHQRAEE 1318
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +EL + Y G + + L+ L
Sbjct: 1319 FAKTGAPDVRRLPSLIVCPPTLSGHWSQELRTYAPFLTVTAYVGP--PSERKALKDSLDK 1376
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ L + W+Y++LDEGHLIKNP + ++
Sbjct: 1377 TDIVITSYDVCRNDVDILAQYN------------WNYIVLDEGHLIKNPKAKITMAVKRF 1424
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
PS HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1425 PSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKASSKEQE 1484
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + ++ QR+L++ F
Sbjct: 1485 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDMSDLQRKLFDDF 1536
Query: 582 -------LNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP-- 630
L E + AL ++K+C+ P L+ K ++ D +LN
Sbjct: 1537 TRKQGKKLQEEAGKDDKEAKSHIFQALQYMRKLCNSPALVMK-PGHNLYDDTQRLLNKQG 1595
Query: 631 ---EDAALAEKLAM---HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
ED A A KL + D + E +D + I + H L+F
Sbjct: 1596 TSLEDPAHAPKLTALRDLLVDCGIGVEGAESNDPLYQPI------------KPHRALVFC 1643
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q ++ML+++Q ++ FLR+DG +A+ R IVN F + + LLT+ VGGL
Sbjct: 1644 QMKEMLDMVQNTVLKSMLPSVSFLRLDGGVEANKRQAIVNKFNQDPSYDVLLLTTSVGGL 1703
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1704 GLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFK 1763
Query: 802 GGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
+ T +Q S D ++L L G
Sbjct: 1764 IDVASTVV--NQQNAGLSTMDTDQILDLFNMG 1793
>gi|302406532|ref|XP_003001102.1| TATA-binding protein-associated factor MOT1 [Verticillium albo-atrum
VaMs.102]
gi|261360360|gb|EEY22788.1| TATA-binding protein-associated factor MOT1 [Verticillium albo-atrum
VaMs.102]
Length = 1876
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 284/572 (49%), Gaps = 69/572 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q ++ H R
Sbjct: 1275 FKIPVAIRAELRSYQQDGVNWLNFLNKYHLHGILCDDMGLGKTLQTICMVSSDHHQRAEE 1334
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +EL + Y G + + L+ L
Sbjct: 1335 FAKTGAPDVRRLPSLIVCPPTLSGHWSQELRTYAPFLTVTAYVGP--PSERKALKDSLDK 1392
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ L + W+Y++LDEGHLIKNP + ++
Sbjct: 1393 TDIVITSYDVCRNDVDILAQYN------------WNYIVLDEGHLIKNPKAKITMAVKRF 1440
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
PS HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1441 PSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKASSKEQE 1500
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + ++ QR+L++ F
Sbjct: 1501 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDMSDLQRKLFDDF 1552
Query: 582 -------LNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP-- 630
L E + AL ++K+C+ P L+ K ++ D +LN
Sbjct: 1553 TRKQGKKLQEEAGKDDKEAKSHIFQALQYMRKLCNSPALVMK-PGHNLYDDTQRLLNKQG 1611
Query: 631 ---EDAALAEKLAM---HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
ED A A KL + D + E +D + I + H L+F
Sbjct: 1612 TSLEDPAHAPKLTALRDLLVDCGIGVEGAESNDPLYQPI------------KPHRALVFC 1659
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q ++ML+++Q ++ FLR+DG +A+ R IVN F + + LLT+ VGGL
Sbjct: 1660 QMKEMLDMVQNTVLKSMLPSVSFLRLDGGVEANKRQAIVNKFNQDPSYDVLLLTTSVGGL 1719
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1720 GLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFK 1779
Query: 802 GGLFKTATEHKEQIRYFSQQDLRELLSLPKQG 833
+ T +Q S D ++L L G
Sbjct: 1780 IDVASTVV--NQQNAGLSTMDTDQILDLFNMG 1809
>gi|240281557|gb|EER45060.1| transcriptional accessory protein [Ajellomyces capsulatus H143]
Length = 1913
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 283/570 (49%), Gaps = 71/570 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1312 FEIPVAIKAELRSYQQEGVNWLAFLNRYHLHGILCDDMGLGKTLQTLCIVASDHHMRSEE 1371
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L++ P TL HW +E+ Y G + + +L+ L
Sbjct: 1372 FARTGAPEARRLPSLIICPPTLSGHWQQEIKQYAPFLSCLAYVGA--PSERSKLRGSLGS 1429
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI----WDYMILDEGHLIKNPSTQRAKS 457
+++T+YDI RN D+D W+Y +LDEGHLIKNP + +
Sbjct: 1430 VDIVITSYDICRN----------------DNDVFVPLNWNYCVLDEGHLIKNPKAKITLA 1473
Query: 458 LLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALD 517
+ + S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI +
Sbjct: 1474 VKRLKSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASQFSKSSS 1533
Query: 518 REKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQL 577
+E+ +G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L
Sbjct: 1534 KEQEVGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKL 1585
Query: 578 YEAFLNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
+E F E ++ GS AL ++++C+ P L+ K + + D + L
Sbjct: 1586 FEDFTKKEQKDITKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKESHKQ-YDEIQKSL 1644
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLI 682
+++ HI DVA D + C I S +L H L+
Sbjct: 1645 AAKNS--------HIRDVAHAPKLIALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALV 1696
Query: 683 FSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q ++ML+++Q + K +FLR+DG+ +A+ R IVN F + LLT+ VG
Sbjct: 1697 FCQMKEMLDIVQNDVLKKLLPSVQFLRLDGSVEATKRQSIVNQFNTDPSYDVLLLTTSVG 1756
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q
Sbjct: 1757 GLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQR 1816
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
FK + T +Q S D +LL L
Sbjct: 1817 FKIDVASTVV--NQQNAGLSTMDTDQLLDL 1844
>gi|302666050|ref|XP_003024628.1| hypothetical protein TRV_01197 [Trichophyton verrucosum HKI 0517]
gi|291188693|gb|EFE44017.1| hypothetical protein TRV_01197 [Trichophyton verrucosum HKI 0517]
Length = 1911
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 295/595 (49%), Gaps = 73/595 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1312 FQIPVGIKAELRSYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1371
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P ++ HW +E+ Y G + +++ +L
Sbjct: 1372 FAKTGAPEVRRLPSLIICPPSVSGHWQQEIKQYAPFISCVAYMGP--PAERAKVRPLLDT 1429
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+S L S W+Y +LDEGHLIKNP + ++ I
Sbjct: 1430 VDIVITSYDICRNDSDVLTSIS------------WNYCVLDEGHLIKNPKAKITLAVKSI 1477
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F E++ PI + +E+
Sbjct: 1478 VSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKIFLERFAKPIAASRFSKSSSKEQE 1537
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E F
Sbjct: 1538 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFEDF 1589
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRA------AEDVLDGMDS 626
E ++ GS AL ++++C+ P L+ K + +L +S
Sbjct: 1590 TQKEQKDIANKVGSSDKEAKEHIFQALQYMRRLCNSPALVMKEGHKQYHQVQKLLASKNS 1649
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-----HNVL 681
N D A A KL+ A +D I C I S +L H L
Sbjct: 1650 --NIRDIAHAPKLS------ALRDLL------IDCGIGVDPSAEGELATGASYVSPHRAL 1695
Query: 682 IFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
IF Q ++ML+++Q + K +FLR+DG+ +A+ R IVN F + LLT+ V
Sbjct: 1696 IFCQMKEMLDIVQNDVLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSV 1755
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q
Sbjct: 1756 GGLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQ 1815
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNM 853
FK + T +Q S D +LL L G ++ + G++ +M
Sbjct: 1816 RFKIDVASTVV--NQQNAGLSTMDTDQLLDLFNLGETADSAEKPTQDGAGNEIDM 1868
>gi|325087704|gb|EGC41014.1| TBP associated factor [Ajellomyces capsulatus H88]
Length = 1756
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 191/566 (33%), Positives = 284/566 (50%), Gaps = 63/566 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1155 FEIPVAIKAELRSYQQEGVNWLAFLNRYHLHGILCDDMGLGKTLQTLCIVASDHHMRSEE 1214
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L++ P TL HW +E+ Y G + + +L+ L
Sbjct: 1215 FARTGAPEARRLPSLIICPPTLSGHWQQEIKQYAPFLSCLAYVGA--PSERSKLRGSLGS 1272
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ F+ W+Y +LDEGHLIKNP + ++ +
Sbjct: 1273 VDIVITSYDICRNDN-----DVFVPLN-------WNYCVLDEGHLIKNPKAKITLAVKRL 1320
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1321 KSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASQFSKSSSKEQE 1380
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
+G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E F
Sbjct: 1381 VGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFEDF 1432
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E ++ GS AL ++++C+ P L+ K + + D + L ++
Sbjct: 1433 TKKEQKDITKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKESHKQ-YDEIQKSLAAKN 1491
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQT 686
+ HI DVA D + C I S +L H L+F Q
Sbjct: 1492 S--------HIRDVAHAPKLIALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQM 1543
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K +FLR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1544 KEMLDIVQNDVLKKLLPSVQFLRLDGSVEATKRQSIVNQFNTDPSYDVLLLTTSVGGLGL 1603
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1604 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1663
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D +LL L
Sbjct: 1664 VASTVV--NQQNAGLSTMDTDQLLDL 1687
>gi|242784804|ref|XP_002480466.1| TBP associated factor (Mot1), putative [Talaromyces stipitatus ATCC
10500]
gi|218720613|gb|EED20032.1| TBP associated factor (Mot1), putative [Talaromyces stipitatus ATCC
10500]
Length = 1894
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 276/538 (51%), Gaps = 61/538 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1291 FEIPVAIKAELRSYQQEGVNWLAFLNRYHLHGILCDDMGLGKTLQTLCIVASDHHMRAEE 1350
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ Y G +++ +L+ L+
Sbjct: 1351 YARTQAPEVRKLPSLIVCPPTLSGHWQQEIKQYAPFLNCVAYVGP--PSQRSQLRGELEK 1408
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+++ S W+Y +LDEGHLIKNP + ++ ++
Sbjct: 1409 ADIVITSYDICRNDTQVFTPIS------------WNYCVLDEGHLIKNPKAKITLAVKQL 1456
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1457 ISNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1516
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + QR+L+E F
Sbjct: 1517 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDPSDLQRKLFEDF 1568
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L + GS AL ++++C+ P L+ K + D + L+ ++
Sbjct: 1569 SKKEQKDLQSKMGSTEKSAKEHIFQALQYMRRLCNSPALVIKEGHKQY-DDVQRWLHAKN 1627
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQT 686
+ HI D+A D + C I + +L H L+F Q
Sbjct: 1628 S--------HIRDIAHAPKLTALRDLLVDCGIGVDPNTEGELDTGASYVSPHRALVFCQM 1679
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++QE + K ++LR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1680 KEMLDIVQEDVLKKMLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGL 1739
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1740 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFK 1797
>gi|225556696|gb|EEH04984.1| transcriptional accessory protein [Ajellomyces capsulatus G186AR]
Length = 1984
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 283/570 (49%), Gaps = 71/570 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1383 FEIPVAIKAELRSYQQEGVNWLAFLNRYHLHGILCDDMGLGKTLQTLCIVASDHHMRSEE 1442
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L++ P TL HW +E+ Y G + + +L+ L
Sbjct: 1443 FARTGAPEARRLPSLIICPPTLSGHWQQEIKQYAPFLSCLAYVGA--PSERSKLRGSLGS 1500
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI----WDYMILDEGHLIKNPSTQRAKS 457
+++T+YDI RN D+D W+Y +LDEGHLIKNP + +
Sbjct: 1501 VDIVITSYDICRN----------------DNDVFVPLNWNYCVLDEGHLIKNPKAKITLA 1544
Query: 458 LLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALD 517
+ + S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI +
Sbjct: 1545 VKRLKSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASQFSKSSS 1604
Query: 518 REKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQL 577
+E+ +G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L
Sbjct: 1605 KEQEVGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKL 1656
Query: 578 YEAFLNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
+E F E ++ GS AL ++++C+ P L+ K + + D + L
Sbjct: 1657 FEDFTKKEQKDIAKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKESHKQY-DEIQKSL 1715
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLI 682
+++ HI DVA D + C I S +L H L+
Sbjct: 1716 AAKNS--------HIRDVAHAPKLIALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALV 1767
Query: 683 FSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q ++ML+++Q + K +FLR+DG+ +A+ R IVN F + LLT+ VG
Sbjct: 1768 FCQMKEMLDIVQNDVLKKLLPSVQFLRLDGSVEATKRQSIVNQFNTDPSYDVLLLTTSVG 1827
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q
Sbjct: 1828 GLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQR 1887
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
FK + T +Q S D +LL L
Sbjct: 1888 FKIDVASTVV--NQQNAGLSTMDTDQLLDL 1915
>gi|326478381|gb|EGE02391.1| TATA-binding protein-associated factor MOT1 [Trichophyton equinum CBS
127.97]
Length = 1912
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 293/590 (49%), Gaps = 63/590 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1313 FQIPVGIKAELRSYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1372
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P ++ HW +E+ Y G + +++ +L
Sbjct: 1373 FAKTGAPEVRRLPSLIICPPSVSGHWQQEIKQYAPFISCVAYMGP--PAERAKVRPLLDT 1430
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+S L S W+Y +LDEGHLIKNP + ++ I
Sbjct: 1431 VDIVITSYDICRNDSDVLTNIS------------WNYCVLDEGHLIKNPKAKITLAVKSI 1478
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F E++ PI + +E+
Sbjct: 1479 VSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKIFLERFAKPIAASRFSKSSSKEQE 1538
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E F
Sbjct: 1539 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFEDF 1590
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E ++ GS AL ++++C+ P L+ K + + +L ++
Sbjct: 1591 TQKEQKDIANKVGSSDKEAKEHIFQALQYMRRLCNSPALVMKEGHKQY-HQVQKLLASKN 1649
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKLIPEG-----HNVLIFSQT 686
++ I D+A D I C I S +L H LIF Q
Sbjct: 1650 SS--------IRDIAHAPKLSALRDLLIDCGIGVDPSAEGELATGASYVSPHRALIFCQM 1701
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K +FLR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1702 KEMLDIVQNDVLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGL 1761
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1762 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1821
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNM 853
+ T +Q S D +LL L G ++ + G++ +M
Sbjct: 1822 VASTVV--NQQNAGLSTMDTDQLLDLFNLGETADSAEKPTQDGTGNEIDM 1869
>gi|326473865|gb|EGD97874.1| TBP associated factor Mot1 [Trichophyton tonsurans CBS 112818]
Length = 1905
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 293/590 (49%), Gaps = 63/590 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1306 FQIPVGIKAELRSYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1365
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P ++ HW +E+ Y G + +++ +L
Sbjct: 1366 FAKTGAPEVRRLPSLIICPPSVSGHWQQEIKQYAPFISCVAYMGP--PAERAKVRPLLDT 1423
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+S L S W+Y +LDEGHLIKNP + ++ I
Sbjct: 1424 VDIVITSYDICRNDSDVLTNIS------------WNYCVLDEGHLIKNPKAKITLAVKSI 1471
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F E++ PI + +E+
Sbjct: 1472 VSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKIFLERFAKPIAASRFSKSSSKEQE 1531
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E F
Sbjct: 1532 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFEDF 1583
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E ++ GS AL ++++C+ P L+ K + + +L ++
Sbjct: 1584 TQKEQKDIANKVGSSDKEAKEHIFQALQYMRRLCNSPALVMKEGHKQY-HQVQKLLASKN 1642
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKLIPEG-----HNVLIFSQT 686
++ I D+A D I C I S +L H LIF Q
Sbjct: 1643 SS--------IRDIAHAPKLSALRDLLIDCGIGVDPSAEGELATGASYVSPHRALIFCQM 1694
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K +FLR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1695 KEMLDIVQNDVLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGL 1754
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1755 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1814
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNM 853
+ T +Q S D +LL L G ++ + G++ +M
Sbjct: 1815 VASTVV--NQQNAGLSTMDTDQLLDLFNLGETADSAEKPTQDGTGNEIDM 1862
>gi|118092869|ref|XP_421689.2| PREDICTED: TATA-binding protein-associated factor 172 [Gallus gallus]
Length = 1865
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 290/590 (49%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-------- 345
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG
Sbjct: 1271 YKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAQE 1330
Query: 346 LFHSRLIKR----ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++L+ +LVV P TL HW+ E+ + T T + LQY ++
Sbjct: 1331 YARTKLVDSVPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQYQVKR 1390
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1391 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1438
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1439 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1498
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1499 AGVLAMEALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCVLSPLQVQLYEDF 1550
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V S G AL L+K+C+HP L+LT +
Sbjct: 1551 AKSRAKCDIDETVSSISLREETEKPKLKATGHVFQALQYLRKLCNHPALVLTTQ------ 1604
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + E+LA H + + + QH + K+S + LL
Sbjct: 1605 -------HPEYKRITEQLAAHNSSLRDI-----QH---APKLSALKQLLLDCGLGNGGSS 1649
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ A R IV+ F
Sbjct: 1650 ESGTEAVVAQHRILIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQRHSIVSRFN 1709
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1710 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1769
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ + L +L +L K G
Sbjct: 1770 ITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTEQLLDLFTLDKDG 1819
>gi|417406776|gb|JAA50032.1| Putative chromatin remodeling complex wstf-iswi small subunit
[Desmodus rotundus]
Length = 1849
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 286/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1256 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1316 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1375
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1376 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1423
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1424 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1483
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1484 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCNLSPLQVQLYEDF 1535
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1536 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1589
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+H + + D Q + K+S + LL
Sbjct: 1590 -------HPEFKSTTEKLAVHNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1634
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1635 ESGTESVVAQHRILIFCQLKSMLDIVEYDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1694
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1695 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1754
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1755 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1804
>gi|449304372|gb|EMD00379.1| hypothetical protein BAUCODRAFT_144057 [Baudoinia compniacensis UAMH
10762]
Length = 1895
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 192/594 (32%), Positives = 294/594 (49%), Gaps = 68/594 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ G+L DDMGLGKT+Q +A H+R K
Sbjct: 1294 FQIPVAIKAELRSYQQEGVNWLAFLNRYQLHGVLCDDMGLGKTLQTLCMVASDHHNRAEK 1353
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ Y G + +++++
Sbjct: 1354 YAEAQSPDFRRMPSLIVCPPTLTGHWKQEIRTYAPFLNAVAYVGP--PAERNRVRHLVDT 1411
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YDI RN+ + L + W+Y +LDEGHLIKNP + ++ +
Sbjct: 1412 ADVVITSYDIARNDVEFLVAQN------------WNYCVLDEGHLIKNPKAKITMAVKRL 1459
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F++++ PI + +E+
Sbjct: 1460 ASNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQDRFAKPIAASRFAKSSSKEQE 1519
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1520 AGALAIESLHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKRLFEDF 1571
Query: 582 LNSEI-VLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L GS AL ++K+C+ P ++ K + D + +ML
Sbjct: 1572 TRKESKSLQEMAGSGDKEAKQHIFQALQYMRKLCNSPAMVMKEGHKQYAD-VQAMLAKSG 1630
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISF------ILSLLDKLIPEGHNVLIFSQT 686
++L K H + D + C I + D+ + + H LIF Q
Sbjct: 1631 SSL--KDPKHAPKLTALRDLL-----VDCGIGVDDADPTSVPSADQAVSQ-HRALIFCQM 1682
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML++++ ++ K F R+DG+ +AS R VN F LLT+ VGGLGL
Sbjct: 1683 KEMLDMVESTVFKKMLPSATFARLDGSIEASKRQDTVNRFNSDPSIDCLLLTTSVGGLGL 1742
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1743 NLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKID 1802
Query: 804 LFKTATEHKEQ-IRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDES 856
+ T + + + +L +L + ++SL E GD + +DES
Sbjct: 1803 VASTVVNQQNAGLGTMETDQILDLFNLGETDPNLSLG------EGGDANKVDES 1850
>gi|67527878|ref|XP_661791.1| hypothetical protein AN4187.2 [Aspergillus nidulans FGSC A4]
gi|40740096|gb|EAA59286.1| hypothetical protein AN4187.2 [Aspergillus nidulans FGSC A4]
gi|259481212|tpe|CBF74527.1| TPA: TBP associated factor (Mot1), putative (AFU_orthologue;
AFUA_1G05830) [Aspergillus nidulans FGSC A4]
Length = 1904
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 189/545 (34%), Positives = 270/545 (49%), Gaps = 77/545 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LP I L P+Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1308 FKLPVAIKAELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHMRAED 1367
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L++ P +L HW +E+ Y G + +LQ L D
Sbjct: 1368 FAKTQRPESRKVPSLIICPPSLSGHWQQEVKQYAPFLNCVAYVGP--PAERSKLQGSLAD 1425
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ LR S W+Y +LDEGHLIKNP + ++ I
Sbjct: 1426 ADIVVTSYDICRNDNDVLRPIS------------WNYCVLDEGHLIKNPKAKVTMAVKRI 1473
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1474 NSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIATSRFSKS-SKEQE 1532
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + Q++L+E F
Sbjct: 1533 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKIIQNYYCDPSELQKKLFEDF 1584
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTKRA------AEDVLDGMDS 626
E L GS AL ++++C+ P L+ K + L S
Sbjct: 1585 TKKEQKALQEKMGSSEKADKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQQYLQEKKS 1644
Query: 627 MLNPEDAALAEKLAMHIADVAEKD-------DFQEQHDNISCKISFILSLLDKLIPEGHN 679
L D + A KL+ A KD + N+ S++ H
Sbjct: 1645 YL--RDVSHAPKLS------ALKDLLLDCGIGVEPTEGNLGAGASYV---------SPHR 1687
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
L+F Q ++ML+++Q + K +FLR+DG +A+ R IVN F + LLT+
Sbjct: 1688 ALVFCQMKEMLDIVQSEVLQKLLPSVQFLRLDGAVEATRRQDIVNRFNSDPSYDVLLLTT 1747
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI
Sbjct: 1748 SVGGLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILN 1807
Query: 797 KQIFK 801
Q FK
Sbjct: 1808 LQRFK 1812
>gi|358386990|gb|EHK24585.1| hypothetical protein TRIVIDRAFT_178207 [Trichoderma virens Gv29-8]
Length = 1732
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 276/545 (50%), Gaps = 77/545 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1132 FQIPVAIKAELRSYQQDGVNWLNFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRQEE 1191
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ + Y G + + ++ L D
Sbjct: 1192 FAKTQAPDVRRLPSLIVCPPTLSGHWQQEIKTYAPFLSVTAYVGPPAERKA--MKDRLGD 1249
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+S L S W+Y++LDEGHLIKNP + +++ +
Sbjct: 1250 TDIVITSYDVTRNDSDVLEKHS------------WNYVVLDEGHLIKNPKAKITQAVKRL 1297
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1298 ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRYSKASSKEQE 1357
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1358 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKKLFEDF 1409
Query: 582 L--------------NSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSM 627
+ E F AL ++K+C+ P ++ K D+ + +
Sbjct: 1410 TKKQGKKIQDEAGRDDKEAKQHIFQ-----ALQYMRKLCNSPAMVMK-PGSDLYNETQKI 1463
Query: 628 LNP-----EDAALAEKLAM---HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
L EDA A KL + D DD + +D + I + H
Sbjct: 1464 LQKQGTSIEDAHHAPKLTALKDLLIDCGIGDDKDDTNDPLYQPI------------KPHR 1511
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q ++ML+++Q + + +LR+DG+ +A+ R IVN F + LLT+
Sbjct: 1512 ALIFCQMKEMLDMVQNKVLKEMLPSVSYLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTT 1571
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI
Sbjct: 1572 SVGGLGLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILS 1631
Query: 797 KQIFK 801
Q FK
Sbjct: 1632 LQRFK 1636
>gi|443720987|gb|ELU10492.1| hypothetical protein CAPTEDRAFT_156480 [Capitella teleta]
Length = 1742
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 195/580 (33%), Positives = 283/580 (48%), Gaps = 84/580 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG--LFHSRL 351
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+ LAG ++
Sbjct: 1151 YRIPVPIKADLRKYQQDGVNWLSFLNRYKLHGILCDDMGLGKTLMSLCILAGDHFLRAKA 1210
Query: 352 IKRA----------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+ + +V+ P TL HW+ E+ S + T +Y LQ VL
Sbjct: 1211 YEESEQADSAPLPSIVICPPTLTGHWVYEVEKFVASEYLNPLHYTGCPAERYRLQKVLPQ 1270
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ S W+Y ILDEGH+IKN T+ +K++ +I
Sbjct: 1271 HNLVVASYDVVRNDIDFFGTIS------------WNYCILDEGHIIKNSKTKLSKAVKQI 1318
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
HR+I+SGTPIQNN+ ELW+LF+F P LG + F KY PIL+ D + +E+
Sbjct: 1319 NCNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAAKYGRPILQSRDAKSSSKEQE 1378
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L ++ P+ LRRLK V + L K + L+ Q QLYE F
Sbjct: 1379 AGARAMEALHRQVLPFLLRRLKENVLQD--------LPPKIIQDYYCDLSPLQVQLYEDF 1430
Query: 582 LNSE----IVLSAFDGS-------PLA----ALTILKKICDHPLLLTKRAAEDVLDGMDS 626
S + +A D + P A AL LKK+C+HP L
Sbjct: 1431 ARSRARQNVEETARDSADAKESAKPTAHIFQALQYLKKLCNHPAL--------------- 1475
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL-------------DKL 673
+LNP E A +K D ++ N + K+S + LL D
Sbjct: 1476 VLNPTHPQFTEVTAQL---KTQKSDLRD--INHAPKLSALKQLLNDCGIGATSCHDTDAP 1530
Query: 674 IPEGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAP 730
+ H L+F Q + ML++++ + K ++R+DG+ A +R IVN F
Sbjct: 1531 VVNQHRALLFCQLKSMLDIVENDLLKKLMPDVMYMRLDGSVPAGNRHGIVNRFNNDPSID 1590
Query: 731 IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTV 790
+ LLT+ VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+
Sbjct: 1591 LLLLTTHVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITKGTL 1650
Query: 791 EEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSL 829
EEKI Q FK + + ++ + + L +L SL
Sbjct: 1651 EEKIMGLQKFKLNIANSVISQENSSLASMGTEQLLDLFSL 1690
>gi|396493864|ref|XP_003844171.1| hypothetical protein LEMA_P018220.1 [Leptosphaeria maculans JN3]
gi|312220751|emb|CBY00692.1| hypothetical protein LEMA_P018220.1 [Leptosphaeria maculans JN3]
Length = 1566
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 273/541 (50%), Gaps = 62/541 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 954 FEIPVGIKATLRSYQQDGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCMVASDHHLRAEE 1013
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ Y G QY + L +
Sbjct: 1014 FAKSGDPNFRRLPSLIVCPPTLSGHWQQEIRQYAPFLSCVAYVGAPGIRGQYRSE--LNN 1071
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ L+ + W+Y +LDEGHLIKN ++ ++++ +
Sbjct: 1072 VDIVITSYDICRNDADVLKPIN------------WNYCVLDEGHLIKNSKSKTSQAVKQF 1119
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1120 QSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQERFAKPIAASRFAKSSSKEQE 1179
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV DD L K + L+ QR L++ F
Sbjct: 1180 RGALAVEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSELQRNLFDDF 1231
Query: 582 L---NSEIVLSAFDGSP------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
EI A + AL +KK+C+ P ++ K + L +
Sbjct: 1232 TRRQGKEIQAKAGNADRESKQHIFQALQYMKKLCNSPAMVVKGPTNKAYEPTQQFLKKTN 1291
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL------IPEG---HNVLIF 683
A+ + +H + D + C I DK +PE H L+F
Sbjct: 1292 TAIDD--VVHAPKLGALKDLL-----VDCGIGASDVATDKSAASNGDLPEAVSQHRALVF 1344
Query: 684 SQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
Q ++ML+++Q ++ K +F+R+DG +A+ R +IVN F + LLT+ VGG
Sbjct: 1345 CQMKEMLDMVQHNVLEKLLPSVQFMRLDGGVEATKRQEIVNKFNSDPSYDVLLLTTSVGG 1404
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q F
Sbjct: 1405 LGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRIVTRGTLEEKILNLQRF 1464
Query: 801 K 801
K
Sbjct: 1465 K 1465
>gi|169617355|ref|XP_001802092.1| hypothetical protein SNOG_11855 [Phaeosphaeria nodorum SN15]
gi|160703388|gb|EAT80899.2| hypothetical protein SNOG_11855 [Phaeosphaeria nodorum SN15]
Length = 1950
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 275/540 (50%), Gaps = 60/540 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1338 FEIPVGIKATLRSYQQDGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCMVASDHHLRAEE 1397
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+R +L+V P TL HW +E+ Y G+ QY + L+
Sbjct: 1398 FERSGDLNFRRLPSLIVCPPTLSGHWQQEIRQYAPFLTSVAYVGSPAVRGQYRNE--LEK 1455
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+ L+ + W+Y +LDEGHLIKN ++ ++++
Sbjct: 1456 ADIVITSYDICRNDMDLLKPIN------------WNYCVLDEGHLIKNSKSKTSQAVKNF 1503
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1504 QSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQERFAKPIAASRFAKSSSKEQE 1563
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV DD L K + L+ QR L++ F
Sbjct: 1564 RGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSELQRNLFDDF 1615
Query: 582 LN---SEIVLSAFDGSP------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
EI A + AL +KK+C+ P ++ K A + L +
Sbjct: 1616 TKRQGQEIQAKAGNADRDSKQHIFQALQYMKKLCNSPAMVVKGPANKAYEPTQQYLKKHN 1675
Query: 633 AAL-----AEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG---HNVLIFS 684
+ A KL A KD + S + + + +PE H LIF
Sbjct: 1676 TTIDDIVHAPKLG------ALKDLLVDCGIGASDVATSQAAPVTGDLPEAVSQHRALIFC 1729
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q ++ML+++Q ++ K +F+R+DGT +A+ R +IVN F + LLT+ VGGL
Sbjct: 1730 QMKEMLDMVQNTVLQKMLPSVQFMRLDGTVEATKRQEIVNKFNSDPSYDVLLLTTSVGGL 1789
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q FK
Sbjct: 1790 GLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRIVTRGTLEEKILSLQRFK 1849
>gi|388581305|gb|EIM21614.1| hypothetical protein WALSEDRAFT_60346 [Wallemia sebi CBS 633.66]
Length = 1821
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 187/539 (34%), Positives = 276/539 (51%), Gaps = 59/539 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P K+ L +QREG+ WL L+ GIL DDMGLGKT+Q LA + H R +K
Sbjct: 1233 YEIPIKVNIDLRKYQREGISWLAFLNKYQLHGILCDDMGLGKTLQSITILASMHHERAMK 1292
Query: 354 R------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+LVV P TL HW E+ + K Y G T + L+ ++
Sbjct: 1293 HQETKSPDSRHLPSLVVCPPTLTGHWKHEILTYANNLKPLLYTGG--PTERARLRKLIPR 1350
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++ +YD+VRN+ L + W Y ILDEGH+IKN T+ K++ E+
Sbjct: 1351 HDVVIMSYDVVRNDIADLGKVN------------WLYCILDEGHVIKNAKTKLTKAVKEV 1398
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+++SGTPIQNN+ ELW+LF++ P LG K F +++ IL + A +E+
Sbjct: 1399 KAHHRLLLSGTPIQNNVLELWSLFDYLMPGFLGSEKAFNDRFGKVILASREAKASSKEQL 1458
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
K L ++I P+ +RRLK +V ++ L K + L+ Q+QLYE F
Sbjct: 1459 AADNALKILHKQILPFIMRRLKEDVLND--------LPPKIIQDYYCDLSDLQQQLYEEF 1510
Query: 582 LNSEIVLSAFDGSP------------LAALTILKKICDHPLLLTKRAAE---DVLDGMDS 626
+S A AL L+K+C+HP L+ + E V+ ++S
Sbjct: 1511 GSSSAANEASQTVKTEEKGGQKQQHVFQALQYLRKLCNHPSLIFNQENEKHKSVIRKLES 1570
Query: 627 M-LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQ 685
N D + A KL +A + Q+ S + + ++ +D H VL+F Q
Sbjct: 1571 KGGNIRDVSNAPKL------LALRQLLQDCGIGESGQSTDGVTDVDNGGVSQHRVLVFCQ 1624
Query: 686 TRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML++++ + K ++R+DG T A R +V F + LLT+ VGGLG
Sbjct: 1625 MKQMLDIVENDLFKKLMPSVSYMRMDGQTPADSRHSVVQKFNSDPSIDVLLLTTHVGGLG 1684
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
L LT AD VI V+ WNP D Q++DRA+R+GQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1685 LNLTGADTVIFVEHDWNPQRDLQAMDRAHRLGQKKTVNVYRLITRGTLEEKIMGLQRFK 1743
>gi|429854889|gb|ELA29870.1| tbp associated factor [Colletotrichum gloeosporioides Nara gc5]
Length = 1207
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 189/566 (33%), Positives = 287/566 (50%), Gaps = 63/566 (11%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL- 351
++ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H+R
Sbjct: 516 SFQIPVAIKAELRSYQQDGVNWLHFLNKYHLHGILCDDMGLGKTLQTICMVASDHHNRAE 575
Query: 352 ---------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
++R +LVV P TL HW +E+ + Y G V + ++ L
Sbjct: 576 EFAKTGAPDVRRLPSLVVCPPTLSGHWQQEIKTYAPFLSVTAYVG--VPAERKTMKDNLD 633
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++T+YD+ RN+++ L + W+Y+ILDEGHLIKNP + ++ +
Sbjct: 634 KTDIVITSYDVCRNDAEVLAKYN------------WNYVILDEGHLIKNPKAKITIAVKK 681
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 682 LASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKASSKEQ 741
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK EV DD L K + L+ Q++L++
Sbjct: 742 EAGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSDLQKKLFDD 793
Query: 581 F-------LNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
F L E D AL ++K+C+ P ++ K + D +LN +
Sbjct: 794 FTRKQGKKLQEEAGREDKDAKSHIFQALQYMRKLCNSPAMVMK-PTHSMYDETQRILNKQ 852
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILS-----LLDKLIPEGHNVLIFSQT 686
+L + + H + D + C I + L + P H LIF Q
Sbjct: 853 GTSLEDPV--HAPKLTALRDLL-----VDCGIGVEEAESNDPLYQPIKP--HRALIFCQM 903
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q ++ G LR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 904 KEMLDMVQNTVLKNMLPGVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGL 963
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 964 NLTGADTVIFVEHDWNPQKDMQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKID 1023
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D ++L L
Sbjct: 1024 VASTVV--NQQNAGLSTMDTDQILDL 1047
>gi|344244648|gb|EGW00752.1| TATA-binding protein-associated factor 172 [Cricetulus griseus]
Length = 1396
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 803 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQE 862
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 863 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 922
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 923 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 970
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 971 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1030
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1031 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1082
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1083 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1136
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 1137 -------HPEFKSTTEKLAVQSSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1181
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H VLIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1182 DSGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1241
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1242 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1301
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1302 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1351
>gi|312371646|gb|EFR19778.1| hypothetical protein AND_21824 [Anopheles darlingi]
Length = 2134
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 182/542 (33%), Positives = 268/542 (49%), Gaps = 74/542 (13%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LP KI L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LA H R +
Sbjct: 1501 FQLPLKINAELRSYQQSGVNWLWFLNRYKLHGILCDDMGLGKTLQAICILAADHHQRSVD 1560
Query: 354 R------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLT 407
R +LV+ P TL HW+ E+ + +R + + +L++ L +++
Sbjct: 1561 RNCAQLPSLVICPPTLTGHWVYEVEKFLPTRFLRPLHYVGLPVSREQLRHKLGTYNLIVA 1620
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
+YDIVR + + GS W+Y ILDEGH+IKN T+ +K++ ++ + HR+
Sbjct: 1621 SYDIVRKDIEFF-GSVH-----------WNYCILDEGHIIKNGRTKSSKAIKQLVANHRL 1668
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
I+SGTPIQNN+ ELW+LF+F P LG K F ++ PIL D + +E+ G+
Sbjct: 1669 ILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFSTRFSRPILASRDPKSSPKEQEAGALAM 1728
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI- 586
+ L ++ P+ LRR+K +V + L K + L+ Q +LYE F +
Sbjct: 1729 EALHRQVLPFLLRRVKEDVLTD--------LPPKITQDLLCELSPLQERLYEDFSRMHLH 1780
Query: 587 ------VLSAFDGSPLA----------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP 630
L DG + AL L+ +C+HP L +L P
Sbjct: 1781 SSDIRECLEHIDGQQMGPANKKTHVFQALRYLQNVCNHPKL---------------VLTP 1825
Query: 631 EDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL--------DKLIPEGHNVLI 682
+ + + A DD + S K+ + LL + + H LI
Sbjct: 1826 SHPEYKDIVGEFTRNGASMDDIEH-----SAKLPVLKQLLLDCGIGTNEDVSVNQHRALI 1880
Query: 683 FSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q + ML++++ + K +LR+DG+ S R IV F + LLT+QVG
Sbjct: 1881 FCQLKAMLDILENDLLKKHLPAVSYLRLDGSVPPSTRHHIVTKFNGDPSIDVLLLTTQVG 1940
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI Q
Sbjct: 1941 GLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRKSLEEKIMGLQK 2000
Query: 800 FK 801
FK
Sbjct: 2001 FK 2002
>gi|261197521|ref|XP_002625163.1| TBP associated factor [Ajellomyces dermatitidis SLH14081]
gi|239595793|gb|EEQ78374.1| TBP associated factor [Ajellomyces dermatitidis SLH14081]
gi|239606789|gb|EEQ83776.1| TBP associated factor [Ajellomyces dermatitidis ER-3]
Length = 1902
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 192/566 (33%), Positives = 279/566 (49%), Gaps = 63/566 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1301 FEIPVAIKAELRSYQQEGVNWLAFLNRYHLHGILCDDMGLGKTLQTLCIVASDHHMRKEE 1360
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L++ P TL HW +E+ Y G + LQ L
Sbjct: 1361 FARSGAPEARRLPSLIICPPTLSGHWQQEIKQYAPFLSCLAYVGP--PAERSRLQNSLGS 1418
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YDI RN++ + W+Y +LDEGHLIKNP + ++ +
Sbjct: 1419 VDVVITSYDICRNDNDVFAPLN------------WNYCVLDEGHLIKNPKAKITLAVKRL 1466
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1467 KSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1526
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QRQL+E F
Sbjct: 1527 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRQLFEDF 1578
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E ++ GS AL ++++C+ P L+ K + D + L ++
Sbjct: 1579 TKKEQKDIAKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKENHKR-YDEIQKSLAGKN 1637
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQT 686
+ HI DVA D + C I S +L H L+F Q
Sbjct: 1638 S--------HIRDVAHAPKLTALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQM 1689
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K ++LR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1690 KEMLDIVQNDVLKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGL 1749
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1750 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1809
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D +LL L
Sbjct: 1810 VASTVV--NQQNAGLSTMDTDQLLDL 1833
>gi|453088981|gb|EMF17021.1| TATA-binding protein-associated factor MOT1 [Mycosphaerella populorum
SO2202]
Length = 1896
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 185/545 (33%), Positives = 277/545 (50%), Gaps = 73/545 (13%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
++ +P I L +Q+EG+ WL L+ G+L DDMGLGKT+Q +A H R
Sbjct: 1294 SFTIPVAIKAELRSYQQEGVNWLAFLNKYNLHGVLCDDMGLGKTLQTLCIVASDHHIRAE 1353
Query: 353 K------------RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
+ ++++ P TL HW +E+ Y G + + Q
Sbjct: 1354 EFEKTGAPDQRRLPSIIICPPTLTGHWKQEIRTYAPFLTAVAYAGPPPERSKVRDQLATA 1413
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
D +++T+Y+I RN+ + L + W+Y +LDEGHLIKNP + +++
Sbjct: 1414 D--IVITSYEIARNDVEILLPIN------------WNYCVLDEGHLIKNPKAKVTQAVKR 1459
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ S HR+I+SGTPIQNN+ ELW+LF+F P LG K F++++ PI + +E+
Sbjct: 1460 LMSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQDRFAKPIAASRFAKSSSKEQ 1519
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L++
Sbjct: 1520 EAGALAIESLHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKRLFDD 1571
Query: 581 FLNSEI-VLSAFDGSP--------LAALTILKKICDHPLLLTKR------AAEDVLDGMD 625
F E L + GSP AL ++K+C+ P ++ K A +D+L
Sbjct: 1572 FTKKESKALQSMAGSPDKEAKQHIFQALQYMRKLCNSPAMVMKEDHKQYSAIQDMLAKQG 1631
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG------HN 679
S N +D A KL A +D + C I + S D +P H
Sbjct: 1632 S--NIKDPKHAPKL------TALRDLL------LDCGIG-VASNQDGGVPSADQAVSQHR 1676
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
VLIF Q ++ML++++ ++ K F R+DG+ +AS R IVN F LLT+
Sbjct: 1677 VLIFCQMKEMLDMVESTVLRKMLPSATFARLDGSVEASKRQDIVNRFNSDPSIDCLLLTT 1736
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI
Sbjct: 1737 SVGGLGLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILN 1796
Query: 797 KQIFK 801
Q FK
Sbjct: 1797 LQRFK 1801
>gi|242017388|ref|XP_002429171.1| TATA-binding protein-associated factor, putative [Pediculus humanus
corporis]
gi|212514049|gb|EEB16433.1| TATA-binding protein-associated factor, putative [Pediculus humanus
corporis]
Length = 1746
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 189/545 (34%), Positives = 271/545 (49%), Gaps = 78/545 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y LP I L +Q+ G+ WL L+ GIL DDMGLGKT+Q LAG + R +
Sbjct: 1159 YKLPVPIKAELRSYQQAGINWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHYYRQQE 1218
Query: 354 R------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++V+ P TL HW+ E+ + + + +L+ + D
Sbjct: 1219 YLEKGSPDCKPLPSIVICPPTLTGHWVYEVEKFLSKEYLNPLQYSGPPAEREKLRSKVCD 1278
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YDIVRN+ + R + W+Y ILDEGH+IKN T+ +K++ +
Sbjct: 1279 YNLIVASYDIVRNDIEFFRSIN------------WNYCILDEGHIIKNGKTKASKAIKSL 1326
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I+SGTPIQNN+ ELW+LF+F P LL K F KY PIL D + +E+
Sbjct: 1327 IANHRLILSGTPIQNNVLELWSLFDFLMPGLLSTEKQFNAKYSRPILASWDPKSSPKEQE 1386
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L ++ P+ LRR+K +V + L K L+ Q QLYE F
Sbjct: 1387 AGVIAMETLHRQVLPFLLRRMKEDVLKD--------LPPKITQDYICELSQLQEQLYEDF 1438
Query: 582 LNSEIVLSAFDGSPLA---------ALTILKKICDHP-LLLTKRAAEDVLDGMDSMLNPE 631
S+ S D L AL L+ +C+HP L+LT + E + ++LN +
Sbjct: 1439 SRSQAHQSLQDSLSLPSHANTHIFQALRYLQNVCNHPKLVLTPQHPE--YQKIMTLLNQQ 1496
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL------------DKLIPEGHN 679
++ DD Q +CK+ + LL D + H
Sbjct: 1497 GTSM--------------DDIQH-----ACKLPALKQLLLDCGIGNAAVANDVVYINQHR 1537
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML++I+ + K +LR+DG+ S R +VN F + LLT+
Sbjct: 1538 ALIFCQLKSMLDIIESDLLKKHLPNVSYLRLDGSIPPSQRHSVVNKFNSDPSIDVLLLTT 1597
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
QVGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI
Sbjct: 1598 QVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMG 1657
Query: 797 KQIFK 801
Q FK
Sbjct: 1658 LQKFK 1662
>gi|238882230|gb|EEQ45868.1| TATA-binding protein associated factor MOT1 [Candida albicans WO-1]
Length = 1917
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 291/580 (50%), Gaps = 64/580 (11%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
++ LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q ++ H R
Sbjct: 1291 SFDLPVTIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVSSDHHIREE 1350
Query: 353 K------------RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
+LV+ P +L+ HW +E+ K+ Y G+ + + L+ +
Sbjct: 1351 NFKETGSAEYRKLPSLVICPPSLIGHWEQEINQYAPFMKVLVYAGS--PSIRIPLRSQIP 1408
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+ V++T+YD+ RN+ +SL + +Y +LDEGH+IKN S++ +KS+
Sbjct: 1409 NADVVVTSYDVCRNDVESLTRHDY------------NYCVLDEGHIIKNASSKLSKSVKR 1456
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ + HR+I+SGTPIQNN+ ELW+LF+F P LG K F EK+ PI + +E+
Sbjct: 1457 VKAEHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQ 1516
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK +V + L K + L+ Q++LY+
Sbjct: 1517 EAGALAMESLHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSDLQKKLYKD 1568
Query: 581 FLNS--EIVLSAFDGSP-------LAALTILKKICDHPLLLTK----RAAED---VLDGM 624
F + E + + GS AL ++K+C+HP L+ + AE ++
Sbjct: 1569 FAKTQKETIKTDVQGSEKEGKTHVFQALQYMRKLCNHPALVMSEQHPKYAEINQFLISRN 1628
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-----HN 679
+ N E A L + + E ++N S K S +LI H
Sbjct: 1629 TDLRNIEHAPKLLSLKNLLLECGIGSQDSEYNNNGSKKKSLQQQQQQQLISADGVISEHR 1688
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML++++ + K F+R+DG+T DR IV F E + LLT+
Sbjct: 1689 ALIFCQLKDMLDIVENELLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNEDPSIDVLLLTT 1748
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+VGGLGL LT AD VI V+ WNP D Q++DRA+R+GQKK V VYRL+T T+EEKI
Sbjct: 1749 KVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRLITKDTLEEKIMG 1808
Query: 797 KQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDV 836
Q FK + T +Q D +LL L FDV
Sbjct: 1809 LQKFKMNIASTIV--NQQNAGLQSMDTNQLLDL----FDV 1842
>gi|327351256|gb|EGE80113.1| transcriptional accessory protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1913
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 192/566 (33%), Positives = 279/566 (49%), Gaps = 63/566 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1312 FEIPVAIKAELRSYQQEGVNWLAFLNRYHLHGILCDDMGLGKTLQTLCIVASDHHMRKEE 1371
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L++ P TL HW +E+ Y G + LQ L
Sbjct: 1372 FARSGAPEARRLPSLIICPPTLSGHWQQEIKQYAPFLSCLAYVGP--PAERSRLQNSLGS 1429
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YDI RN++ + W+Y +LDEGHLIKNP + ++ +
Sbjct: 1430 VDVVITSYDICRNDNDVFAPLN------------WNYCVLDEGHLIKNPKAKITLAVKRL 1477
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1478 KSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1537
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QRQL+E F
Sbjct: 1538 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRQLFEDF 1589
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E ++ GS AL ++++C+ P L+ K + D + L ++
Sbjct: 1590 TKKEQKDIAKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKENHKR-YDEIQKSLAGKN 1648
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQT 686
+ HI DVA D + C I S +L H L+F Q
Sbjct: 1649 S--------HIRDVAHAPKLTALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQM 1700
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K ++LR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1701 KEMLDIVQNDVLKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGL 1760
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1761 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1820
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D +LL L
Sbjct: 1821 VASTVV--NQQNAGLSTMDTDQLLDL 1844
>gi|451998045|gb|EMD90510.1| hypothetical protein COCHEDRAFT_1195708 [Cochliobolus heterostrophus
C5]
Length = 1938
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 272/542 (50%), Gaps = 64/542 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1326 FEIPVGIKATLRSYQQDGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCMVASDHHMRADE 1385
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ Y G+ QY + L
Sbjct: 1386 FAKSGDPNFRRLPSLIVCPPTLSGHWQQEIRQYAPFLSCVAYVGSPPIRSQYRNE--LDK 1443
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ L+ + W+Y +LDEGHLIKN ++ ++++ +
Sbjct: 1444 VDIVITSYDICRNDADILKPIN------------WNYCVLDEGHLIKNSKSKTSQAVKQF 1491
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1492 QSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQERFAKPIAASRFAKSSSKEQE 1551
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV DD L K + L+ QR L++ F
Sbjct: 1552 RGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSELQRNLFDDF 1603
Query: 582 L---NSEIVLSAFDGSP------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
EI A + AL +KK+C+ P L+ K + L +
Sbjct: 1604 TKRQGKEIQSKAGNADRESKQHIFQALQYMKKLCNSPSLVVKGPTNKAYESTQQYLKKHN 1663
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL------IPEG---HNVLI 682
I D+A D + C I + DK +PE H L+
Sbjct: 1664 TT--------IDDIAHAPKLGALKDLLVDCGIGASDVVSDKSANANGDLPEAVSQHRALV 1715
Query: 683 FSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q ++ML+++Q ++ K +F+R+DG +A+ R +IVN F + LLT+ VG
Sbjct: 1716 FCQMKEMLDMVQHNVLEKLLPSVQFMRLDGGVEATKRQEIVNKFNTDPSYDVLLLTTSVG 1775
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q
Sbjct: 1776 GLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRIVTRGTLEEKILNLQR 1835
Query: 800 FK 801
FK
Sbjct: 1836 FK 1837
>gi|315055153|ref|XP_003176951.1| TATA-binding protein-associated factor MOT1 [Arthroderma gypseum CBS
118893]
gi|311338797|gb|EFQ97999.1| TATA-binding protein-associated factor MOT1 [Arthroderma gypseum CBS
118893]
Length = 1906
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 293/590 (49%), Gaps = 63/590 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1307 FQIPVGIKAELRSYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1366
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P ++ HW +E+ Y G + +++ +L
Sbjct: 1367 FAKTGAPEVRRLPSLIICPPSVSGHWQQEIKQYAPFISCVSYMGP--PAERAKVRPLLDS 1424
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ L S W+Y +LDEGHLIKNP + ++ I
Sbjct: 1425 VDIVITSYDICRNDNDVLTNIS------------WNYCVLDEGHLIKNPKAKITLAVKSI 1472
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F E++ PI + +E+
Sbjct: 1473 VSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKIFLERFAKPIAASRFSKSSSKEQE 1532
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E F
Sbjct: 1533 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFEDF 1584
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E ++ GS AL ++++C+ P L+ K + + +L ++
Sbjct: 1585 TQKEQKDIANKVGSSDKEAKEHIFQALQYMRRLCNSPALVMKEGHKQY-HQVQKLLASKN 1643
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKLIPEG-----HNVLIFSQT 686
++ I D+A D I C I S +L H LIF Q
Sbjct: 1644 SS--------IRDIAHAPKLSALRDLLIDCGIGVDPSAEGELATGASYVSPHRALIFCQM 1695
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K +FLR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1696 KEMLDIVQNDVLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGL 1755
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1756 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1815
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNM 853
+ T +Q S D +LL L G ++ + G++ +M
Sbjct: 1816 VASTVV--NQQNAGLSTMDTDQLLDLFNLGETADSAEKPTQDGTGNEIDM 1863
>gi|449277131|gb|EMC85407.1| TATA-binding protein-associated factor 172, partial [Columba livia]
Length = 1841
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 290/590 (49%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-------- 345
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG
Sbjct: 1247 YKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAQE 1306
Query: 346 LFHSRLIKR----ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++L+ +LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1307 YARTKLVDSVPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHQVKR 1366
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1367 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1414
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1415 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1474
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1475 AGVLAMEALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCILSPLQVQLYEDF 1526
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V S G AL L+K+C+HP L+LT +
Sbjct: 1527 AKSRAKCDIDETVSSISLNEETEKPKLKATGHVFQALQYLRKLCNHPALVLTTQ------ 1580
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + E+LA H + + + QH + K+S + LL
Sbjct: 1581 -------HPEYKRITEQLAAHNSSLRDI-----QH---APKLSALKQLLLDCGLGNGGSS 1625
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H VLIF Q + ML++++ + +LR+DG+ A R IV+ F
Sbjct: 1626 ESGTEAVVAQHRVLIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQRHSIVSRFN 1685
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1686 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1745
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ + L +L +L K G
Sbjct: 1746 ITRGTLEEKIMGLQKFKMNIANTVISQENTSLQSMGTEQLLDLFTLDKDG 1795
>gi|212527854|ref|XP_002144084.1| TBP associated factor (Mot1), putative [Talaromyces marneffei ATCC
18224]
gi|210073482|gb|EEA27569.1| TBP associated factor (Mot1), putative [Talaromyces marneffei ATCC
18224]
Length = 1894
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 182/539 (33%), Positives = 276/539 (51%), Gaps = 61/539 (11%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1293 AFEIPVAIKAELRSYQQDGVNWLAFLNRYHLHGILCDDMGLGKTLQTLCIVASDHHMRAE 1352
Query: 353 KRA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
+ A L+V P TL HW +E+ Y G +++ +L+ L+
Sbjct: 1353 EYARTQKPEVRKLPSLIVCPPTLSGHWQQEIKQYAPFLNCVAYVGP--PSQRSQLRGELE 1410
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++T+YDI RN+++ S W+Y +LDEGHLIKNP + ++ +
Sbjct: 1411 KADIVITSYDICRNDTQIFTPIS------------WNYCVLDEGHLIKNPKAKITLAVKQ 1458
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1459 LVSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQ 1518
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK EV ++ L K + + QR+L+E
Sbjct: 1519 EAGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKIIQNYYCDPSDLQRKLFED 1570
Query: 581 FLNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
F E L + GS AL ++++C+ P L+ K + D + L+ +
Sbjct: 1571 FSKKEQKDLQSKMGSTEKSAKEHIFQALQYMRRLCNSPALVIKEGHKQY-DDVQKYLSAK 1629
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQ 685
++ HI D++ D I C I + +L H L+F Q
Sbjct: 1630 NS--------HIRDISHAPKLTALRDLLIDCGIGVDPNTEGELDTGASYVSPHRALVFCQ 1681
Query: 686 TRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML+++QE + K ++LR+DG+ +A+ R IVN F + LLT+ VGGLG
Sbjct: 1682 MKEMLDIVQEDVLKKMLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLG 1741
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
L LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1742 LNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFK 1800
>gi|340959603|gb|EGS20784.1| helicase-like protein [Chaetomium thermophilum var. thermophilum DSM
1495]
Length = 1886
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 274/543 (50%), Gaps = 73/543 (13%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1287 FKIPVAIKAELRSYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRAEE 1346
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L++ P TL HW +E+ + Y G+ + R ++ L
Sbjct: 1347 FARTGAPEVRKLPSLIICPPTLSGHWQQEIKTYAPFLTVTAYVGSPAERRA--MKDSLDK 1404
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ + + W+Y +LDEGHLIKNP + ++ +
Sbjct: 1405 TDIVITSYDVCRNDIDVIEKYN------------WNYCVLDEGHLIKNPKAKITLAVKRL 1452
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1453 TSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIANSRYSKASSKEQE 1512
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E F
Sbjct: 1513 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFEDF 1564
Query: 582 LNSE---IVLSAFDGSPLA------ALTILKKICDHPLLLTK---RAAEDVLDGM----- 624
E I +A A AL ++K+C+ P L+ K +A ED +
Sbjct: 1565 TKREGKKITETAGRDDKEAKQHIFQALQYMRKLCNSPALVMKPGHKAYEDTQKYLAKHGT 1624
Query: 625 ---DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVL 681
D + P+ AL + L D + QE D + I + H L
Sbjct: 1625 TLEDPIHAPKLGALRDLL----VDCGIGVEGQESSDPLYTPI------------KPHRAL 1668
Query: 682 IFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
IF Q ++ML+++Q ++ + +LR+DG+ +A+ R IVN F + LLT+ V
Sbjct: 1669 IFCQMKEMLDMVQNTVLKQMLPSVSYLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSV 1728
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q
Sbjct: 1729 GGLGLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRIITRGTLEEKILSLQ 1788
Query: 799 IFK 801
FK
Sbjct: 1789 RFK 1791
>gi|361124414|gb|EHK96512.1| putative helicase mot1 [Glarea lozoyensis 74030]
Length = 1911
Score = 272 bits (696), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 185/537 (34%), Positives = 271/537 (50%), Gaps = 59/537 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1312 FHIPVAIKAELRSYQQEGVNWLNFLNKYHLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1371
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ Y G V + L+ L
Sbjct: 1372 FAKTQSPDARRLPSLIVCPPTLSGHWQQEINHYAPFLTCTAYVGPPVD--RARLRDKLGS 1429
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+++ L + W+Y++LDEGHLIKNP + ++ +
Sbjct: 1430 TDIVITSYDICRNDAEVLTPFN------------WNYLVLDEGHLIKNPRAKVTIAVKRL 1477
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1478 LSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKSSSKEQE 1537
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV DD L K + L+ Q++L+E F
Sbjct: 1538 AGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSDLQKKLFEDF 1589
Query: 582 LNSEIVLSAFDGSP---------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E A S AL ++K+C+ P L+ K + ++ +L +
Sbjct: 1590 TKKEGKTLAEKASAGDKEAKQHIFQALQYMRKLCNSPALVMKEGHKQYVE-TQRLLAKQG 1648
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-----HNVLIFSQTR 687
+L++ + H + D + C I + + L E H LIF Q +
Sbjct: 1649 TSLSDPI--HAPKLTALRDLL-----VDCGIGIEPASENDLTTEANFVSPHRALIFCQMK 1701
Query: 688 KMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
+ML+++Q + K ++LR+DG+ AS R IVN F LLT+ VGGLGL
Sbjct: 1702 EMLDMVQNDVLKKMLPSVQYLRMDGSVDASKRQDIVNKFNSDPSYDCLLLTTSVGGLGLN 1761
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1762 LTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMSLQRFK 1818
>gi|398009274|ref|XP_003857837.1| DNA excision/repair protein SNF2, putative [Leishmania donovani]
gi|322496039|emb|CBZ31111.1| DNA excision/repair protein SNF2, putative [Leishmania donovani]
Length = 776
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 177/515 (34%), Positives = 262/515 (50%), Gaps = 86/515 (16%)
Query: 331 MGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVG---LSAKIREYFGTC 387
MGLGKT+Q+ FL L+ ++IK ++V P TL+S W G L+ +
Sbjct: 1 MGLGKTVQVAAFLGQLYARQMIKTTILVVPPTLVSIWTAAFAEWGGASLTRVVEVIHNEP 60
Query: 388 VKTRQY---ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEG 444
K RQ +L+Y L VLLTTY ++R D A + DY++LDE
Sbjct: 61 RKKRQARWRKLRYGL--PCVLLTTYGVLRQ------------DAADMSVTLVDYVVLDEA 106
Query: 445 HLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYE 504
HLIK+P+T KS L + + H+I ++GTP+ N ++W++F F +L +K
Sbjct: 107 HLIKDPNTCVFKSALTLAARHKIALTGTPLMNTFDDMWSIFRFLDGSILDMDKSNFNAVS 166
Query: 505 LPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEM 564
+LRGN++ A ++ S+ +L+ I+P+ LRR K DV + S K ++
Sbjct: 167 ATLLRGNERDASAAQREAASSELAKLQAAIRPFMLRREKK------DVAAQVLSSSKEDV 220
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLSAFDGS------------------------------ 594
+VW+RLT Q+QLY AFL+S+ V SA +G+
Sbjct: 221 VVWVRLTDVQQQLYAAFLDSKEVASAREGAADVDLTEGTTDEDGVVMEKSSLGGGDSSAA 280
Query: 595 ------PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAM--HIADV 646
PL LT+L +IC+HP L S+L D A A L+ + A V
Sbjct: 281 ATVRTNPLLLLTMLSQICNHPWL--------------SLL---DEAFAAALSRNPYKAPV 323
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLR 706
AE D K+ L LL + + E L+FS++R+ L+L+ + +
Sbjct: 324 AEMGDVFG-----GAKLWVALQLLRRCVSEQRKTLVFSRSRRFLHLLSFLLQEWRLTHTQ 378
Query: 707 IDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
+DG T + R V F + LLT+QVGG+GLT A V+++D +WNPS D Q+
Sbjct: 379 VDGNTPSERRCAEVERFNNDAGVWVCLLTTQVGGVGLTFNAASAVVLLDISWNPSADAQA 438
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
+DR +RIGQ++DVVV+RL+TCGTVEEK+YR QIFK
Sbjct: 439 IDRVHRIGQRRDVVVFRLVTCGTVEEKVYRNQIFK 473
>gi|354473594|ref|XP_003499019.1| PREDICTED: TATA-binding protein-associated factor 172-like
[Cricetulus griseus]
Length = 1853
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1260 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQE 1319
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1320 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1379
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1380 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1427
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1428 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1487
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1488 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1539
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1540 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1593
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 1594 -------HPEFKSTTEKLAVQSSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1638
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H VLIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1639 DSGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1698
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1699 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1758
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1759 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1808
>gi|353234874|emb|CCA66894.1| related to MOT1-transcriptional accessory protein [Piriformospora
indica DSM 11827]
Length = 1876
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 187/555 (33%), Positives = 274/555 (49%), Gaps = 65/555 (11%)
Query: 289 GPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH 348
G Y +P I L +Q+EG+ WL L GIL DDMGLGKT+Q LA H
Sbjct: 1284 GQVENYQIPVTINAELRKYQQEGVNWLAFLRKYQLHGILCDDMGLGKTLQSICILASAHH 1343
Query: 349 SRLIKR-----ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG 403
R + + +V P TL +HW+ E+ + K Y G VK R+ + L+
Sbjct: 1344 ERAERNEPHLPSFIVCPPTLTNHWLHEINRYANNLKPIIYAGP-VKERRARSKR-LKQYD 1401
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
V++T+YD+VRN+ L + W Y ILDEGHLIKN ++ ++++ I +
Sbjct: 1402 VVITSYDVVRNDINVLAHQT------------WLYCILDEGHLIKNARSKVSQAVKTIKA 1449
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
HR+I+SGTPIQNNL ELW+LF+F P LG+ F E++ P+L + +
Sbjct: 1450 HHRLILSGTPIQNNLLELWSLFDFLMPGFLGNESQFNERFARPVLASKEGKMGAKGAESA 1509
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
+ + L ++ P+ LRR+K V ++ L K + ++ Q+ L+E F
Sbjct: 1510 ARALEALHKQALPFLLRRMKENVLND--------LPPKIIQDYYCDVSPLQQLLFEEFQT 1561
Query: 584 SEIVLSAFD--------GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAAL 635
S+ A G AL L+K+C+HP L+ K PE AA+
Sbjct: 1562 SKASEEATTSVKSEGTKGHVFQALQYLRKVCNHPALVLKDE------------QPETAAI 1609
Query: 636 AEKLAMHIADVAEKDDFQEQHDNIS-------CKISFILSLLDK--------LIPEGHNV 680
EKLA + DV D + ++ C I L+ P H
Sbjct: 1610 LEKLAANGEDVKSVRDIENAPKLLALKQLLQDCGIGVTSKDLEAPEDHLELPAEPPQHRC 1669
Query: 681 LIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
LIF Q + M+++I++ + ++R+DGTT++ R IV F + LLT+
Sbjct: 1670 LIFCQMKMMVDVIEKDLFQTMMPTVSYMRLDGTTESQRRHAIVQTFNDDPSIDCLLLTTH 1729
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
+GGLGLTLT AD VI V+ WNP D Q++DRA+R+GQK+ V VYRL+T GT+EEKI
Sbjct: 1730 IGGLGLTLTGADTVIFVEHDWNPMKDLQAMDRAHRLGQKRVVNVYRLITKGTLEEKIMGL 1789
Query: 798 QIFKGGLFKTATEHK 812
Q FK + T +
Sbjct: 1790 QRFKLNIANTVVTQQ 1804
>gi|194382816|dbj|BAG64578.1| unnamed protein product [Homo sapiens]
Length = 677
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 84 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 143
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 144 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 203
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 204 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 251
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 252 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 311
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 312 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 363
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 364 AKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 417
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE AEKLA+ + + D Q + K+S + LL
Sbjct: 418 -------HPEFKTTAEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 462
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 463 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 522
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 523 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 582
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 583 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 632
>gi|297687009|ref|XP_002821019.1| PREDICTED: TATA-binding protein-associated factor 172 [Pongo abelii]
Length = 1849
Score = 272 bits (695), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1256 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1316 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERIRLQHQVKR 1375
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1376 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1423
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1424 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1483
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1484 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1535
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT
Sbjct: 1536 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPH------ 1589
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE AEKLA+ + + D Q + K+S + LL
Sbjct: 1590 -------HPEFKTTAEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1634
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1635 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1694
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1695 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1754
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1755 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1804
>gi|189188400|ref|XP_001930539.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972145|gb|EDU39644.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1794
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 182/541 (33%), Positives = 274/541 (50%), Gaps = 62/541 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1182 FEIPVGIKATLRSYQQDGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCMVASDHHMRAAE 1241
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ Y G+ Q+ + L
Sbjct: 1242 FAKSGDPNFRRLPSLIVCPPTLSGHWQQEIRQYAPFLSCVAYVGSPPIRGQHRNE--LDK 1299
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ L+ + W+Y +LDEGHLIKN ++ ++++ +
Sbjct: 1300 VDIVITSYDICRNDADILKPIN------------WNYCVLDEGHLIKNSKSKTSQAVKQF 1347
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1348 QSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQERFAKPIAASRFAKSSSKEQE 1407
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV DD L K + L+ QR L++ F
Sbjct: 1408 RGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSELQRNLFDDF 1459
Query: 582 L---NSEIVLSAFDGSP------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
EI A + AL +KK+C+ P L+ K + + L +
Sbjct: 1460 TKRQGKEIQSKAGNADRESKQHIFQALQYMKKLCNSPSLVVKGPSNKAYEPTQQYLKKNN 1519
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL------IPEG---HNVLIF 683
+ + +H + D + C I + DK +PE H L+F
Sbjct: 1520 TTIDD--IVHAPKLGALKDLL-----VDCGIGASDVVSDKSANANGDLPEAVSQHRALVF 1572
Query: 684 SQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
Q ++ML+++Q ++ K +F+R+DG +A+ R +IVN F + LLT+ VGG
Sbjct: 1573 CQMKEMLDMVQHNVLEKLLPSVQFMRLDGGVEATKRQEIVNKFNTDPSYDVLLLTTSVGG 1632
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q F
Sbjct: 1633 LGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRIVTRGTLEEKILNLQRF 1692
Query: 801 K 801
K
Sbjct: 1693 K 1693
>gi|85090821|ref|XP_958601.1| hypothetical protein NCU07556 [Neurospora crassa OR74A]
gi|28919976|gb|EAA29365.1| hypothetical protein NCU07556 [Neurospora crassa OR74A]
Length = 1893
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 180/539 (33%), Positives = 268/539 (49%), Gaps = 65/539 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1292 FQIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRAEE 1351
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ + Y G + + ++ L
Sbjct: 1352 FAKTGAPDVRRLPSLIVCPPTLSGHWQQEIKNYAPFLSVTTYVGPPAERKA--MKDTLDK 1409
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ ++ S W+Y++LDEGHLIKNP + ++ ++
Sbjct: 1410 TDIVITSYDVCRNDIDVIKKYS------------WNYVVLDEGHLIKNPKAKITIAVKQL 1457
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1458 ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIANSRYSKASSKEQE 1517
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ QR+L+E F
Sbjct: 1518 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQRKLFEDF 1569
Query: 582 LNSE---IVLSA------FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGM-------D 625
E I A AL ++K+C+ P L+ K + D
Sbjct: 1570 TKREAKKITEEAGRDDKEAKAHIFQALQYMRKLCNSPALVMKPGHKQYDDTQKFLAKRNT 1629
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQ 685
S+ +P A L + D + QE D + I + H LIF Q
Sbjct: 1630 SLEDPVHAPKLTALRDLLVDCGIGVEGQESSDPLYTPI------------KPHRALIFCQ 1677
Query: 686 TRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML+++Q ++ LR+DG+ + R IVN F + LLT+ VGGLG
Sbjct: 1678 MKEMLDMVQNTVLKTMLPSVSHLRLDGSVDPTRRQDIVNKFNSDPSYDVLLLTTSVGGLG 1737
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
L LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1738 LNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFK 1796
>gi|301761472|ref|XP_002916159.1| PREDICTED: TATA-binding protein-associated factor 172-like
[Ailuropoda melanoleuca]
Length = 1865
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1272 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1331
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1332 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERIRLQHQVKR 1391
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1392 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1439
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1440 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1499
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1500 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1551
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1552 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1605
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 1606 -------HPEFKSTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1650
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ I H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1651 ESGTESIVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1710
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1711 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1770
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1771 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1820
>gi|20988306|gb|AAH29930.1| BTAF1 protein, partial [Homo sapiens]
Length = 680
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 87 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 146
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 147 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 206
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 207 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 254
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 255 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 314
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 315 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 366
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 367 AKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 420
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE AEKLA+ + + D Q + K+S + LL
Sbjct: 421 -------HPEFKTTAEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 465
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 466 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 525
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 526 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 585
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 586 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 635
>gi|27477070|ref|NP_003963.1| TATA-binding protein-associated factor 172 [Homo sapiens]
gi|397510029|ref|XP_003825407.1| PREDICTED: TATA-binding protein-associated factor 172 [Pan paniscus]
gi|12643543|sp|O14981.2|BTAF1_HUMAN RecName: Full=TATA-binding protein-associated factor 172; AltName:
Full=ATP-dependent helicase BTAF1; AltName: Full=B-TFIID
transcription factor-associated 170 kDa subunit; AltName:
Full=TAF(II)170; AltName: Full=TBP-associated factor 172;
Short=TAF-172
gi|2920587|gb|AAC04573.1| TBP-associated factor 172 [Homo sapiens]
gi|2995136|emb|CAA04475.1| TBP associated factor [Homo sapiens]
gi|85567637|gb|AAI12202.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated,
170kDa [Homo sapiens]
gi|119570487|gb|EAW50102.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated,
170kDa (Mot1 homolog, S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|119570488|gb|EAW50103.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated,
170kDa (Mot1 homolog, S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|410227610|gb|JAA11024.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated,
170kDa [Pan troglodytes]
gi|410258000|gb|JAA16967.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated,
170kDa [Pan troglodytes]
gi|410302120|gb|JAA29660.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated,
170kDa [Pan troglodytes]
gi|410341487|gb|JAA39690.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated,
170kDa [Pan troglodytes]
Length = 1849
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1256 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1316 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1375
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1376 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1423
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1424 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1483
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1484 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1535
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1536 AKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1589
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE AEKLA+ + + D Q + K+S + LL
Sbjct: 1590 -------HPEFKTTAEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1634
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1635 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1694
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1695 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1754
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1755 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1804
>gi|451845492|gb|EMD58804.1| hypothetical protein COCSADRAFT_165059 [Cochliobolus sativus ND90Pr]
Length = 1941
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 273/541 (50%), Gaps = 62/541 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1329 FEIPVGIKATLRSYQQDGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCMVASDHHMRADE 1388
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ Y G+ QY + L
Sbjct: 1389 FAKSGDPNFRRLPSLIVCPPTLSGHWQQEIRQYAPFLSCVAYVGSPPIRNQY--RNDLDK 1446
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ L+ + W+Y +LDEGHLIKN ++ ++++ +
Sbjct: 1447 VDIVITSYDICRNDADILKPIN------------WNYCVLDEGHLIKNSKSKTSQAVKQF 1494
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1495 QSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQERFAKPIAASRFAKSSSKEQE 1554
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV DD L K + L+ QR L++ F
Sbjct: 1555 RGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSELQRNLFDDF 1606
Query: 582 L---NSEIVLSAFDGSP------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
EI A + AL +KK+C+ P L+ K + L +
Sbjct: 1607 TKRQGKEIQSKAGNADRESKQHIFQALQYMKKLCNSPSLVVKGPTNRAYESTQQYLKKHN 1666
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL------IPEG---HNVLIF 683
+ + +H + D + C I + DK +PE H L+F
Sbjct: 1667 TTIDD--IVHAPKLGALKDLL-----VDCGIGASDVVSDKSANANGDLPEAVSQHRALVF 1719
Query: 684 SQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
Q ++ML+++Q ++ K +F+R+DG +A+ R +IVN F + LLT+ VGG
Sbjct: 1720 CQMKEMLDMVQHNVLEKLLPSVQFMRLDGGVEATKRQEIVNKFNTDPSYDVLLLTTSVGG 1779
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q F
Sbjct: 1780 LGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRIVTRGTLEEKILNLQRF 1839
Query: 801 K 801
K
Sbjct: 1840 K 1840
>gi|339896714|ref|XP_001462637.2| putative DNA excision/repair protein SNF2 [Leishmania infantum
JPCM5]
gi|321398837|emb|CAM65175.2| putative DNA excision/repair protein SNF2 [Leishmania infantum
JPCM5]
Length = 776
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 177/515 (34%), Positives = 262/515 (50%), Gaps = 86/515 (16%)
Query: 331 MGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVG---LSAKIREYFGTC 387
MGLGKT+Q+ FL L+ ++IK ++V P TL+S W G L+ +
Sbjct: 1 MGLGKTVQVAAFLGQLYARQMIKTTILVVPPTLVSIWTAAFAEWGGASLTRVVEVIHNEP 60
Query: 388 VKTRQY---ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEG 444
K RQ +L+Y L VLLTTY ++R D A + DY++LDE
Sbjct: 61 RKKRQARWRKLRYGL--PCVLLTTYGVLRQ------------DAADMSVTLVDYVVLDEA 106
Query: 445 HLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYE 504
HLIK+P+T KS L + + H+I ++GTP+ N ++W++F F +L +K
Sbjct: 107 HLIKDPNTCVFKSALTLAARHKIALTGTPLMNTFDDMWSIFRFLDGSILDMDKSNFNAVS 166
Query: 505 LPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEM 564
+LRGN++ A ++ S+ +L+ I+P+ LRR K DV + S K ++
Sbjct: 167 ATLLRGNERDASAAQREAASSELAKLQAAIRPFMLRREKK------DVAAQVLSSSKEDV 220
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLSAFDGS------------------------------ 594
+VW+RLT Q+QLY AFL+S+ V SA +G+
Sbjct: 221 VVWVRLTDVQQQLYAAFLDSKEVASAREGAADVDLTEGTTDEDGVVMEKSSLGGGDTSAA 280
Query: 595 ------PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAM--HIADV 646
PL LT+L +IC+HP L S+L D A A L+ + A V
Sbjct: 281 ATVRTNPLLLLTMLSQICNHPWL--------------SLL---DEAFAAALSRNPYKAPV 323
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLR 706
AE D K+ L LL + + E L+FS++R+ L+L+ + +
Sbjct: 324 AEMGDVFG-----GAKLWVALQLLRRCVSEQRKTLVFSRSRRFLHLLSFLLQEWRLTHTQ 378
Query: 707 IDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
+DG T + R V F + LLT+QVGG+GLT A V+++D +WNPS D Q+
Sbjct: 379 VDGNTPSERRCAEVERFNNDAGVWVCLLTTQVGGVGLTFNAASAVVLLDISWNPSADAQA 438
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
+DR +RIGQ++DVVV+RL+TCGTVEEK+YR QIFK
Sbjct: 439 IDRVHRIGQRRDVVVFRLVTCGTVEEKVYRNQIFK 473
>gi|62087266|dbj|BAD92080.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated,
170kDa variant [Homo sapiens]
Length = 699
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 106 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 165
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 166 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 225
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 226 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 273
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 274 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 333
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 334 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 385
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 386 AKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 439
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE AEKLA+ + + D Q + K+S + LL
Sbjct: 440 -------HPEFKTTAEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 484
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 485 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 544
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 545 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 604
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 605 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 654
>gi|400602579|gb|EJP70181.1| SNF2 family DNA-dependent ATPase domain-containing protein [Beauveria
bassiana ARSEF 2860]
Length = 1900
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 185/540 (34%), Positives = 275/540 (50%), Gaps = 67/540 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1300 FAIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTLCIVASDHHQRQEE 1359
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ + Y G + + L+ L D
Sbjct: 1360 FAKTQAPDVRRLPSLIVCPPTLSGHWQQEIRTYAPFLSVTAYVGPPAERKL--LKSKLGD 1417
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+S L + W+Y++LDEGHLIKNP + ++++ +
Sbjct: 1418 TDIVITSYDVCRNDSDELEKHN------------WNYVVLDEGHLIKNPKAKISQAVKRL 1465
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1466 SSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIASSRFSKASSKEQE 1525
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV DD L K + + Q++L+E F
Sbjct: 1526 AGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDPSDLQKKLFEDF 1577
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE- 631
+ L A G AL ++K+C+ P ++ K + D +L+ +
Sbjct: 1578 HKKQGKKLQAEAGREDKESKQHIFQALQYMRKLCNSPAMVMKPGVP-MFDETQRILSKQG 1636
Query: 632 ----DAALAEKLAM---HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
D A A KL + D D E +D + I + H LIF
Sbjct: 1637 TSIDDVAHAPKLGALRDLLVDCGIGGDDGESNDPLYQPI------------KPHRALIFC 1684
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q ++ML+++Q + + LR+DG+ +A+ R IVN F + LLT+ VGGL
Sbjct: 1685 QMKEMLDMVQNKVLKEMLPSVSHLRLDGSIEANKRQDIVNKFNSDPSYDVLLLTTSVGGL 1744
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1745 GLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1804
>gi|426365568|ref|XP_004049842.1| PREDICTED: TATA-binding protein-associated factor 172 [Gorilla
gorilla gorilla]
Length = 1748
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1155 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1214
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1215 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1274
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1275 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1322
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1323 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1382
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1383 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1434
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1435 AKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1488
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE AEKLA+ + + D Q + K+S + LL
Sbjct: 1489 -------HPEFKTTAEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1533
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1534 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1593
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1594 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1653
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1654 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1703
>gi|332980995|ref|YP_004462436.1| SNF2-like protein [Mahella australiensis 50-1 BON]
gi|332698673|gb|AEE95614.1| SNF2-related protein [Mahella australiensis 50-1 BON]
Length = 1040
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 182/565 (32%), Positives = 284/565 (50%), Gaps = 84/565 (14%)
Query: 275 DDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLG 334
++ L+ + I + P LP N+L +Q+EG+ W+ L G GGIL DDMGLG
Sbjct: 549 NNKFLQFKDEIRSAKPIEDIPLPQPFDNILRQYQKEGINWMHFLRKYGFGGILADDMGLG 608
Query: 335 KTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYE 394
KT+Q ++ S + +LV+ PKTL+ +W E+ + +++ + +
Sbjct: 609 KTIQALVLISA---SNSDRPSLVICPKTLVYNWYNEVQK--FTPQLKTLIVEGQGAERIQ 663
Query: 395 LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQR 454
L ++ +++T+Y +++ + + L +F +Y I+DE IKN T+
Sbjct: 664 LINDIKHYDLIITSYPVIQKDIEYLADKTF------------EYCIIDEAQYIKNHKTKT 711
Query: 455 AKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKH 514
AKS+ I + +R+ ++GTPI+NNL ELW++F+F P LG + FK +Y+ PI++ ND
Sbjct: 712 AKSIKAIRAKYRLALTGTPIENNLMELWSIFDFLMPGFLGSDSEFKARYDTPIMKNNDIS 771
Query: 515 ALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQ 574
AL+ L RI+P+ LRR K E+ E L K E + + LT Q
Sbjct: 772 ALN-----------SLLGRIRPFVLRRTKKEMLKE--------LPPKMEQVSYAHLTPDQ 812
Query: 575 RQLYEAFLN-------SEIVLSAFDGSP---LAALTILKKICDHPLLLTKRAAEDVLDGM 624
LY + L + + F+ S LAALT L++IC+HP LLT
Sbjct: 813 LALYTSVLEQVKSNVFAIVEQKGFEHSQIEILAALTRLRQICNHPALLTINTP------- 865
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
A +KL+ + D F E LLD+ + H VL+FS
Sbjct: 866 ---------ATTKKLSS-----GKLDQFDE--------------LLDEALEGDHKVLVFS 897
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
Q +ML ++ + KG + +DG T+ +R ++ F + +FL++ + GG GL
Sbjct: 898 QFVQMLGILSNHLDKKGVPYCYLDGQTR--NRQAVIERFNNDENIKVFLISIKAGGFGLN 955
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
LT AD VI+ DP WNP + Q+ DRAYRIGQ V VYRL+T GT+EEKI + Q K L
Sbjct: 956 LTAADTVIIFDPWWNPMVEMQATDRAYRIGQTHPVNVYRLITRGTIEEKILKLQEKKKAL 1015
Query: 805 FKTAT-EHKEQIRYFSQQDLRELLS 828
F E+ + I+ + D+RE+ +
Sbjct: 1016 FDNVVDENNDLIKKLTWDDIREVFA 1040
>gi|218188726|gb|EEC71153.1| hypothetical protein OsI_02992 [Oryza sativa Indica Group]
Length = 997
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/323 (43%), Positives = 202/323 (62%), Gaps = 18/323 (5%)
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
+E R+ ++PYFLRR K + + L K ++++WL+LT Q +LYE F+ S ++
Sbjct: 345 EEFRKMVRPYFLRRTKESI--------ESLLPNKADLVIWLKLTPYQIELYETFMKSNLI 396
Query: 588 LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
GS A +L+KIC+HP LT +D + L ++ + + + +
Sbjct: 397 DKTVKGSTFVATMLLQKICNHPQNLT------AVDSCEEQLALKENRTLQGIVKKLEALI 450
Query: 648 EKDDFQEQHDNISCKISFILSLL----DKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYK 703
K+ + + SCK++FIL LL +KL EGH VLIFSQTR ML+ I+E++ +KG
Sbjct: 451 AKNTTKTSNCLKSCKLTFILQLLKTWQEKLKEEGHKVLIFSQTRLMLDEIEEALTNKGVH 510
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
F R+DGT AS R I+ FQ D PIFL+T++VGG+GL LT A RVI+ DP+WNPS D
Sbjct: 511 FARMDGTVTASKREAIIKGFQSKDGPPIFLMTTKVGGIGLNLTNASRVIIADPSWNPSLD 570
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDL 823
NQ VDR YRIGQ+K+V++YRL+T T+EE+IY KQ+ K G+FK ATE ++ RY ++
Sbjct: 571 NQCVDRVYRIGQEKNVIIYRLITSCTIEERIYEKQVSKEGIFKAATEERDFRRYINKLGY 630
Query: 824 RELLSLPKQGFDVSLTQQQLHEE 846
+E L LP+ GF SL Q++L E
Sbjct: 631 KEFLKLPEMGFGTSLLQKRLEIE 653
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQ-GKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
++LP +I + LFPHQ++GL WLW LHC+ GGIL DDMGLGKT Q FLAGLF+S L
Sbjct: 196 FLLPSEIFSSLFPHQKDGLEWLWRLHCEKSGGGILADDMGLGKTRQASAFLAGLFYSDLT 255
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIV 412
+R L+VAP T+L WI ELT VG + + F C KTR L VL++ GVLL TYD+V
Sbjct: 256 QRVLIVAPGTILHQWIAELTKVGFNEDLIHSFW-CAKTRHDSLAQVLKEGGVLLITYDLV 314
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGH--LIKNPSTQRAKSLLE--IPSAHRII 468
R ++ L G S S + WDY+ILDE +++ +R K +E +P+ ++
Sbjct: 315 RLYNEELNGMSSKSSKMRRACPSWDYVILDEEFRKMVRPYFLRRTKESIESLLPNKADLV 374
Query: 469 I--SGTPIQNNLKELW 482
I TP Q L E +
Sbjct: 375 IWLKLTPYQIELYETF 390
>gi|440300206|gb|ELP92695.1| hypothetical protein EIN_370970 [Entamoeba invadens IP1]
Length = 835
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 202/630 (32%), Positives = 308/630 (48%), Gaps = 80/630 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGK--GGILGDDMGLGKTMQICGFLAGLFHSRL 351
+ +P I +ML PHQR ++WLW H K G ILGDDMGLGKT++I F+ G+ +
Sbjct: 93 FSIPYDIFSMLLPHQRVAIKWLWEHHNDTKIHGCILGDDMGLGKTVEILAFILGVSCLKD 152
Query: 352 I----KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLT 407
I K L+V P + W E + R+ + V + G+LLT
Sbjct: 153 IRVQAKTFLLVVPAMVAQQWETEAKKWSPGITMFNVHDMAPADRRAAARAVGTEGGILLT 212
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
TY++V+N DE+ WDY+ILDE H+IK+ + + ++L + H+I
Sbjct: 213 TYNMVQN------------DESSVSCVTWDYIILDEAHVIKSKTAKVTQTLKSFKAKHKI 260
Query: 468 IISGTPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
+GTP+ NNL ELW L +F ELLG+ +F++KYE I + N K + E
Sbjct: 261 SATGTPMMNNLMELWNLMDFTTDGELLGEAAYFQQKYERVISKANLK---NEESPYAKTR 317
Query: 527 AKELRERIQPYFLRRLKNEVFHE---------------DDVTSSATLSKKN--------- 562
+L + PY LRR K +VF E DD S T K+
Sbjct: 318 LTQLSRVVGPYILRRTKKDVFGEGGPELLDEEKQKKDVDDEDDSKTPKSKDDLQLTVSKF 377
Query: 563 EMIVWLRLTSCQRQLYEAFL---NSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAED 619
E+IVW+++ QR++Y L N + + + + + L+K C +P + A+ D
Sbjct: 378 ELIVWIKMDKNQREMYLKLLKSINMRDLGTTYMRLVIGMINYLEKSCSNPPAIKDTASND 437
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
G ++ + AEK A E + + IL + +K G
Sbjct: 438 ---GTHKFIDEQMIDFAEKEA-------------EFYWPKLLILLEILKMFEK---TGDK 478
Query: 680 VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
L+FSQ ++ L+ I + + K F+RIDG+ R + + F + L+T +VG
Sbjct: 479 CLVFSQYQRTLDSICDLLQVKDVPFMRIDGSVDDRTRKERLKRFNTMQSWGVLLMTIRVG 538
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GL +T A RV++ D W+ NQ+VDR YRIGQ KDVV YRL++CGTVEEK+YR+Q+
Sbjct: 539 ACGLNITGASRVVIFDEGWS-VIGNQAVDRVYRIGQTKDVVTYRLVSCGTVEEKMYRRQL 597
Query: 800 FKGGLFKTATEH---KEQIR-YFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQ--HNM 853
K L + A E ++ R +F++ +L L + + FD S T L +E+ Q NM
Sbjct: 598 HKATLAELALEKNMANQRFRHWFTKDELYALFDVSQVKFDFS-TTHILFKEYQPQFPQNM 656
Query: 854 ---DESLEAHIQFLDTL-GIAGVSHHSLLF 879
+ L HI +++L G+ GVS H+ +
Sbjct: 657 PVYPQWLNEHIHTIESLSGVYGVSDHNFII 686
>gi|403259927|ref|XP_003922444.1| PREDICTED: TATA-binding protein-associated factor 172 [Saimiri
boliviensis boliviensis]
Length = 1849
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1256 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1316 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERVRLQHQVKR 1375
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1376 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1423
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1424 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1483
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1484 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1535
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1536 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1589
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE EKLA+ + + D Q + K+S + LL
Sbjct: 1590 -------HPEFKTTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1634
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1635 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1694
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1695 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1754
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ + L +L +L K G
Sbjct: 1755 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTEQLLDLFTLDKDG 1804
>gi|281345313|gb|EFB20897.1| hypothetical protein PANDA_004205 [Ailuropoda melanoleuca]
Length = 1845
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1252 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1311
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1312 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERIRLQHQVKR 1371
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1372 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1419
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1420 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1479
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1480 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1531
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1532 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1585
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 1586 -------HPEFKSTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1630
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ I H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1631 ESGTESIVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1690
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1691 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1750
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1751 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1800
>gi|330925332|ref|XP_003301007.1| hypothetical protein PTT_12406 [Pyrenophora teres f. teres 0-1]
gi|311324570|gb|EFQ90879.1| hypothetical protein PTT_12406 [Pyrenophora teres f. teres 0-1]
Length = 1935
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 277/552 (50%), Gaps = 62/552 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1323 FEIPVGIKATLRSYQQDGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCMVASDHHMRAAE 1382
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ Y G+ Q+ + L
Sbjct: 1383 FAKSGDPNFRRLPSLIVCPPTLSGHWQQEIRQYAPFLSCVAYVGSPPIRGQHRNE--LDK 1440
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ L+ + W+Y +LDEGHLIKN ++ ++++ +
Sbjct: 1441 VDIVITSYDICRNDADILKPIN------------WNYCVLDEGHLIKNSKSKTSQAVKQF 1488
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1489 QSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQERFAKPIAASRFAKSSSKEQE 1548
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV DD L K + L+ QR L++ F
Sbjct: 1549 RGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSELQRNLFDDF 1600
Query: 582 L---NSEIVLSAFDGSP------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
EI A + AL +KK+C+ P L+ K + + L +
Sbjct: 1601 TKRQGKEIQSKAGNADRESKQHIFQALQYMKKLCNSPSLVVKGPSNKAYEPTQQYLKKNN 1660
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL------IPEG---HNVLIF 683
+ + +H + D + C I + DK +PE H L+F
Sbjct: 1661 TTIDD--IVHAPKLGALKDLL-----VDCGIGASDVVSDKSANANGDLPEAVSQHRALVF 1713
Query: 684 SQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
Q ++ML+++Q ++ K +F+R+DG +A+ R +IVN F + LLT+ VGG
Sbjct: 1714 CQMKEMLDMVQHNVLEKLLPSVQFMRLDGGVEATKRQEIVNKFNTDPSYDVLLLTTSVGG 1773
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q F
Sbjct: 1774 LGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRIVTRGTLEEKILNLQRF 1833
Query: 801 KGGLFKTATEHK 812
K + T +
Sbjct: 1834 KIDIASTVVNQQ 1845
>gi|170034779|ref|XP_001845250.1| TATA-binding protein-associated factor 172 [Culex quinquefasciatus]
gi|167876380|gb|EDS39763.1| TATA-binding protein-associated factor 172 [Culex quinquefasciatus]
Length = 1899
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 277/538 (51%), Gaps = 70/538 (13%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P KI L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LAG + R +
Sbjct: 1307 FKIPVKINAELRSYQQSGVNWLWFLNKYKLHGILCDDMGLGKTLQAICILAGDHYQRSLD 1366
Query: 354 R------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLT 407
+LV+ P TL HW+ E+ + +R + + L+ L +++
Sbjct: 1367 PKISKLPSLVICPPTLTGHWVYEVEKFMPTRFLRPLHYVGLPVDRERLRNKLGTYNLIVA 1426
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
+Y+IVR + + F S W+Y +LDEGH+IKN T+ +K++ ++ + HR+
Sbjct: 1427 SYEIVRKDIE------FFSS------VHWNYCVLDEGHIIKNGRTKSSKAIKQLVANHRL 1474
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
I+SGTPIQNN+ ELW+LF+F P LG K F ++ PIL D + +E+ G+
Sbjct: 1475 ILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFSTRFSRPILASRDPKSSPKEQEAGALAM 1534
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF----LN 583
+ L ++ P+ LRR+K +V + L K + L+ Q +LYE F LN
Sbjct: 1535 EALHRQVLPFLLRRVKEDVLTD--------LPPKITQDLLCELSPLQERLYEDFSRTHLN 1586
Query: 584 SEI--VLSAFDGSPLA-------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAA 634
S+I L DG ++ AL L+ +C+HP L+ + + +PE +
Sbjct: 1587 SDIRECLENIDGQMVSKKTHVFQALRYLQNVCNHPKLVLQPS------------HPEYQS 1634
Query: 635 LAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL--------DKLIPEGHNVLIFSQT 686
+ + + + + + DD + S K+ + LL + + H LIF Q
Sbjct: 1635 IVSEFSRNSSSL---DDIEH-----SAKLPALKQLLLDCGIGTNEDMSVNQHRALIFCQL 1686
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
+ ML++I+ + K +LR+DG S R +IV F + LLT+QVGGLGL
Sbjct: 1687 KAMLDIIENDLLKKHLPAVSYLRLDGGVPPSSRHQIVTKFNGDPSIDVLLLTTQVGGLGL 1746
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI Q FK
Sbjct: 1747 NLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRKSLEEKIMGLQKFK 1804
>gi|115375420|ref|ZP_01462681.1| SWI/SNF family helicase [Stigmatella aurantiaca DW4/3-1]
gi|310821127|ref|YP_003953485.1| snf2/helicase domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115367547|gb|EAU66521.1| SWI/SNF family helicase [Stigmatella aurantiaca DW4/3-1]
gi|309394199|gb|ADO71658.1| SNF2/helicase domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 982
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/537 (32%), Positives = 262/537 (48%), Gaps = 91/537 (16%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA 355
LPG + L +Q +G+ WL L G GGIL DDMGLGKT+Q L +
Sbjct: 533 LPGDLTATLRAYQLQGVSWLRFLRGAGLGGILADDMGLGKTLQTLCVLG--------PKT 584
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG-VLLTTYDIVRN 414
LVV P ++L +W EL S ++ Y G L D V LTTY ++R
Sbjct: 585 LVVCPTSVLPNWAAELKRFRPSLRVGVYHGPG---------RALDDATDVTLTTYSLLRL 635
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
++ L G + WD +ILDE IKNP +Q A++ + + R+ ISGTP+
Sbjct: 636 DAAVLAGRA------------WDAVILDEAQAIKNPESQVARAAFGLKAGFRLAISGTPL 683
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
+N L+ELW+L +F P LLG + F+++ PI G + A+ LR RI
Sbjct: 684 ENRLEELWSLMHFVNPGLLGGRRHFEDRVARPITDGQ------------AEAAERLRRRI 731
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL---NSEIVLSAF 591
+P+ LRRLK +V E L + E ++ + L +R +Y+A + +E+V
Sbjct: 732 RPFVLRRLKRDVAPE--------LPPRTESVMHVSLDDRERAVYDAVMAATRAEVVALLN 783
Query: 592 DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
+G VL ++++L AA L
Sbjct: 784 EGG------------------------SVLKALEALLRLRQAACHSAL------------ 807
Query: 652 FQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTT 711
QH S K+ ++ L + EGH L+FSQ +L+LI+ + G F R+DGTT
Sbjct: 808 VPGQHATSSSKVQTLVEALGTAVSEGHKALVFSQWTSLLDLIEPGLKGAGIAFERLDGTT 867
Query: 712 KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
+DR + FQ + AP+ L++ + GG GL LT AD V ++DP WNP+ + Q+ DRA+
Sbjct: 868 --ADRGAVTTRFQSPEGAPVMLMSLKAGGTGLNLTAADHVFLMDPWWNPAVEAQAADRAH 925
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLS 828
RIGQ++ V+VYRL++ GTVEE+I Q K +F+ A ++ DL EL +
Sbjct: 926 RIGQERPVMVYRLVSQGTVEERILGLQEKKRAIFEAALSEAGAATAITRADLLELFA 982
>gi|302915977|ref|XP_003051799.1| SNF2 family DNA-dependent ATPase domain-containing protein [Nectria
haematococca mpVI 77-13-4]
gi|256732738|gb|EEU46086.1| SNF2 family DNA-dependent ATPase domain-containing protein [Nectria
haematococca mpVI 77-13-4]
Length = 1890
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 188/568 (33%), Positives = 283/568 (49%), Gaps = 69/568 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1291 FQIPVAIKAELRSYQQEGVNWLNFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRAEE 1350
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ + Y G + + ++ L +
Sbjct: 1351 FAKTKAPDVRRLPSLIVCPPTLSGHWQQEIKTYAPFLSVTAYVGPPAERKA--MKDRLGE 1408
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+S L D W+Y++LDEGHLIKNP + +++ +
Sbjct: 1409 TDIVVTSYDVCRNDSDIL------------DKHSWNYVVLDEGHLIKNPKAKITQAVKRL 1456
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1457 ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKASSKEQE 1516
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1517 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKKLFEDF 1568
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP-- 630
+ + A G AL ++K+C+ P ++ K D +LN
Sbjct: 1569 TRKQGKKIQAEAGREDKEAKQHIFQALQYMRKLCNSPAMVMK-PGTPFYDDTQRILNKKG 1627
Query: 631 ---EDAALAEKLAM---HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
ED A KL + D + E +D + I + H LIF
Sbjct: 1628 TSIEDTQHAPKLTALRDLLVDCGIGVEGNESNDPLYQPI------------KPHRALIFC 1675
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q ++ML+++Q + + LR+DG+ +A+ R IVN F + LLT+ VGGL
Sbjct: 1676 QMKEMLDMVQNKVLKELLPSVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGL 1735
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1736 GLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1795
Query: 802 GGLFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D ++L L
Sbjct: 1796 IDVASTVV--NQQNAGLSTMDTDQILDL 1821
>gi|350592934|ref|XP_003359339.2| PREDICTED: TATA-binding protein-associated factor 172 [Sus scrofa]
Length = 1849
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1256 YEIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1316 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERVRLQHQVKR 1375
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1376 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1423
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1424 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1483
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1484 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1535
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1536 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1589
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 1590 -------HPEFKSTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1634
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ I H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1635 ESGTESIVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1694
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1695 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1754
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1755 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1804
>gi|408391352|gb|EKJ70731.1| hypothetical protein FPSE_09101 [Fusarium pseudograminearum CS3096]
Length = 1892
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 189/568 (33%), Positives = 287/568 (50%), Gaps = 69/568 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1293 FQIPVAIKAELRSYQQEGVNWLNFLNKYHLHGILCDDMGLGKTLQTLCIVASDHHQRAEE 1352
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ + Y G + + L+ L +
Sbjct: 1353 FAKTQAPDVRRMPSLIVCPPTLSGHWQQEIKTYAPFLSVTAYVGPPAERKA--LKDRLGE 1410
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YD+ RN+S+ L S W+Y++LDEGHLIKNP + +++ +
Sbjct: 1411 TDVVVTSYDVCRNDSEILGKHS------------WNYVVLDEGHLIKNPKAKITQAVKRL 1458
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1459 ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKASSKEQE 1518
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1519 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQQKLFEDF 1570
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSML---- 628
+ + A G AL ++K+C+ P ++ K + + D +L
Sbjct: 1571 TRKQGKKIQAEAGREDKEAKQHIFQALQYMRKLCNSPAMVMKPGSS-LYDDTQKILAKQG 1629
Query: 629 -NPEDAALAEKLAM---HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
+ EDA A KL + D + + +D + I + H LIF
Sbjct: 1630 TSIEDAQHAPKLTALRDLLVDCGIGVEGNDSNDPLYQPI------------KPHRALIFC 1677
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q ++ML+++Q + + LR+DG+ +A+ R IVN F + LLT+ VGGL
Sbjct: 1678 QMKEMLDMVQNKVLKELLPSVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGL 1737
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1738 GLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1797
Query: 802 GGLFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D ++L L
Sbjct: 1798 IDVASTVV--NQQNAGLSTMDTDQILDL 1823
>gi|395501890|ref|XP_003755321.1| PREDICTED: TATA-binding protein-associated factor 172 [Sarcophilus
harrisii]
Length = 1869
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 287/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG--LFHSRL 351
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG F ++
Sbjct: 1275 YKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCFRAQE 1334
Query: 352 IKRA----------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
R+ LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1335 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERVRLQHQVKK 1394
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ + F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1395 HNLIVASYDVVRNDIDFFKNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1442
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1443 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1502
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1503 AGVLAMEALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1554
Query: 582 LNS-------EIVLSAF------------DGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1555 AKSRAKCDVDETVSSAALAEETEKPKLKATGHVFQALQYLRKLCNHPALVLTTQ------ 1608
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE E+LA A + D Q + K+S + LL
Sbjct: 1609 -------HPEFKNTTEQLA---AQNSSLRDIQH-----APKLSALKQLLLDCGLGNASTS 1653
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ A R IV+ F
Sbjct: 1654 ESGTEAVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPAGQRHSIVSRFN 1713
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1714 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1773
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1774 ITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTDQLLDLFTLDKDG 1823
>gi|426252779|ref|XP_004020080.1| PREDICTED: TATA-binding protein-associated factor 172 [Ovis aries]
Length = 1848
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1255 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1314
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1315 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1374
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1375 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1422
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1423 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1482
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1483 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1534
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1535 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1588
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA A + D Q + K+S + LL
Sbjct: 1589 -------HPEFKSTTEKLA---AQNSSLRDIQH-----APKLSALKQLLLDCGLGNGSTS 1633
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1634 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1693
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1694 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1753
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1754 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1803
>gi|355673957|gb|AER95225.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated,
170kDa [Mustela putorius furo]
Length = 833
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 241 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 300
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 301 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERIRLQHQVKK 360
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 361 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 408
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 409 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 468
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 469 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 520
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 521 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 574
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 575 -------HPEFKSTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 619
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 620 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 679
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 680 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 739
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 740 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 789
>gi|440897761|gb|ELR49385.1| TATA-binding protein-associated factor 172, partial [Bos grunniens
mutus]
Length = 1844
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1251 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1310
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1311 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1370
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1371 HNLVVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1418
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1419 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1478
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1479 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1530
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1531 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1584
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA A + D Q + K+S + LL
Sbjct: 1585 -------HPEFKSTTEKLA---AQNSSLHDIQH-----APKLSALKQLLLDCGLGNGSTS 1629
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1630 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1689
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1690 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1749
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1750 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1799
>gi|359323200|ref|XP_003640032.1| PREDICTED: TATA-binding protein-associated factor 172-like [Canis
lupus familiaris]
Length = 1849
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1256 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1316 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERIRLQHQVKR 1375
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1376 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1423
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1424 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1483
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1484 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1535
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1536 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1589
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 1590 -------HPEFKSTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1634
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1635 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1694
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1695 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1754
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1755 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1804
>gi|50310019|ref|XP_455023.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644158|emb|CAH00110.1| KLLA0E23717p [Kluyveromyces lactis]
Length = 1873
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 278/553 (50%), Gaps = 76/553 (13%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG--LFHSRL 351
+ LP I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A S
Sbjct: 1277 FKLPVAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRSED 1336
Query: 352 IKR----------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
K+ +L++ P +L HW +E + + Y G + +Y LQ +
Sbjct: 1337 YKKTQSEKTRPLPSLIICPPSLTGHWEQEFQQYSPTLNVLVYAGG--PSVRYPLQGQVPT 1394
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ L+ + +Y +LDEGH+IKN ++ AK++ I
Sbjct: 1395 ADIVVTSYDVARNDVDFLKKYDY------------NYCVLDEGHIIKNSQSKLAKAVKLI 1442
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR++++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1443 NSNHRLVLTGTPIQNNVVELWSLFDFLMPGFLGTEKMFQERFAKPIASSRNSKTSSKEQE 1502
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV + L K + L+ Q+QLY F
Sbjct: 1503 AGALALEALHKQVLPFMLRRLKEEVLSD--------LPPKIIQDYYCELSDLQKQLYNDF 1554
Query: 582 LNSE--IVLSAFDGSP--------LAALTILKKICDHPLLLTKRA-----------AEDV 620
+ + +V + + AL ++K+C+HP L+ + ++
Sbjct: 1555 VKKQKNVVEKDIENTAEVENKQHIFQALQYMRKLCNHPSLVLNSSHPQFQQVQSYLSQTG 1614
Query: 621 LDGMDSMLNPEDAALAEKL---AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
+D D P+ AL L + I DV +K + DN+ +
Sbjct: 1615 MDLHDIGHAPKLEALKTLLLECGIGIQDVEKKSNKNPSIDNVISQ--------------- 1659
Query: 678 HNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLL 734
H VLIF Q + ML++++ + K F+R+DG+ + DR K+V F E LL
Sbjct: 1660 HRVLIFCQLKDMLDMVENDLLKKHLPSVTFMRLDGSVDSRDRQKVVRKFNEDPSIDCLLL 1719
Query: 735 TSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI 794
T++VGGLGL LT AD VI V+ WNP D Q++DRA+R+GQKK V VYR++T GT+EEKI
Sbjct: 1720 TTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRIITKGTLEEKI 1779
Query: 795 YRKQIFKGGLFKT 807
Q FK + T
Sbjct: 1780 MGLQKFKMNIAST 1792
>gi|338716500|ref|XP_003363463.1| PREDICTED: LOW QUALITY PROTEIN: TATA-binding protein-associated
factor 172-like [Equus caballus]
Length = 1780
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1187 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1246
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1247 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1306
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1307 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1354
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1355 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1414
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1415 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1466
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1467 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1520
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 1521 -------HPEFKSTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1565
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1566 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1625
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1626 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1685
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1686 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1735
>gi|126273285|ref|XP_001375597.1| PREDICTED: TATA-binding protein-associated factor 172 [Monodelphis
domestica]
Length = 1878
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 287/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG--LFHSRL 351
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG F ++
Sbjct: 1284 YKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCFRAQE 1343
Query: 352 IKRA----------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
R+ LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1344 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERIRLQHQVKK 1403
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ + F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1404 HNLIVASYDVVRNDIDFFKNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1451
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1452 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1511
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1512 AGVLAMEALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1563
Query: 582 LNS-------EIVLSAF------------DGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V +A G AL L+K+C+HP L+LT +
Sbjct: 1564 AKSRAKCDVDETVSTAALAEETEKPKLKATGHVFQALQYLRKLCNHPALVLTTQ------ 1617
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE E+LA A + D Q + K+S + LL
Sbjct: 1618 -------HPEFKNTTEQLA---AQNSSLRDIQH-----APKLSALKQLLLDCGLGNTSTS 1662
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ A R IV+ F
Sbjct: 1663 ESGTEAVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPAGQRHSIVSRFN 1722
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1723 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1782
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1783 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1832
>gi|346327627|gb|EGX97223.1| TBP associated factor (Mot1), putative [Cordyceps militaris CM01]
Length = 1897
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 270/532 (50%), Gaps = 51/532 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1297 FAIPVAIKAELRSYQQDGVNWLHFLNKYHLHGILCDDMGLGKTLQTLCIVASDHHQRQEE 1356
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ + Y G + + L+ L D
Sbjct: 1357 FAKSQAPDVRPMPSLIVCPPTLSGHWQQEIRTYAPFLSVTAYVGPPAERKL--LKNKLGD 1414
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+S+ L S W+Y++LDEGHLIKNP + ++++ +
Sbjct: 1415 TDIVITSYDVCRNDSELLEKHS------------WNYVVLDEGHLIKNPKAKISQAVKRL 1462
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1463 ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRYSKASSKEQE 1522
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + QR+L+E F
Sbjct: 1523 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDPSDLQRKLFEDF 1574
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
+ L A G AL ++K+C+ P ++ K + D +L+ +
Sbjct: 1575 HKKQGKQLQAEAGREDKESKQHIFQALQYMRKLCNSPAMVMKPGVP-MFDETQKILSKQG 1633
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNL 692
A+ + +H + D L + P H LIF Q ++ML++
Sbjct: 1634 TAIDD--IVHAPKLGALRDLLVDCGIGGDDGDTNDPLYQPIKP--HRALIFCQMKEMLDM 1689
Query: 693 IQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKAD 749
+Q + + LR+DG+ +A+ R IVN F + LLT+ VGGLGL LT AD
Sbjct: 1690 VQNKVLKEMLPTVSHLRLDGSIEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLTGAD 1749
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1750 TVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1801
>gi|355562633|gb|EHH19227.1| hypothetical protein EGK_19900, partial [Macaca mulatta]
Length = 1845
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1252 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1311
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1312 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1371
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1372 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1419
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1420 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAAQYGKPILASRDARSSSREQE 1479
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1480 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1531
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1532 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1585
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE EKLA+ + + D Q + K+S + LL
Sbjct: 1586 -------HPEFKTTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1630
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1631 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1690
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1691 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1750
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1751 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1800
>gi|344274507|ref|XP_003409057.1| PREDICTED: TATA-binding protein-associated factor 172 [Loxodonta
africana]
Length = 1915
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1322 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1381
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1382 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1441
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1442 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1489
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1490 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1549
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1550 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1601
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1602 AKSRAKCDVEETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1655
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA A + D Q + K+S + LL
Sbjct: 1656 -------HPEFKSTTEKLA---AQNSSLHDIQH-----APKLSALKQLLLDCGLGNGSTS 1700
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1701 EGGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1760
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1761 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1820
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1821 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1870
>gi|294942448|ref|XP_002783529.1| DNA repair protein rad54, putative [Perkinsus marinus ATCC 50983]
gi|239896026|gb|EER15325.1| DNA repair protein rad54, putative [Perkinsus marinus ATCC 50983]
Length = 682
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 297/563 (52%), Gaps = 59/563 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTL 363
L+ +Q+EG++WL+ L +GKGGIL D MG+GKT+Q+C L GL RL R L++ K+L
Sbjct: 129 LYDYQKEGVKWLYELFQRGKGGILADIMGMGKTIQVCVLLRGLLKGRLASRVLILCEKSL 188
Query: 364 LSHWIKELTAVGLSAKIREYFG-TCVKTRQYEL-QYVLQDKGVLLTTYDIVRNNSKSL-- 419
W KE + + I G R+ +L Q L +++ +RN++ L
Sbjct: 189 RDTWEKETSQWCGNWHIISLCGYNSASQREKKLKQSWLARNCIIIANQTFIRNDNLPLYS 248
Query: 420 ---RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQN 476
+S + +E+ D WD ++ DE ++NP T + + + +++++GTPIQN
Sbjct: 249 ACDENASPMWEES--DRVPWDIIVYDEAQRMRNPRTALFQHATIMRAKSKLLLTGTPIQN 306
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQP 536
+LWAL P LLGD FK K+ I RGN + A + +++ +EL I
Sbjct: 307 TPCDLWALMEIAVPGLLGDFAVFKNKFAEVIKRGNRREATELQEKNKDLAVEELNAVIYD 366
Query: 537 YFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF----D 592
Y LRR K + D++T K E+IVW+ L+ Q +Y+ +LN+ V A D
Sbjct: 367 YVLRREK----YVDEITEGDV--SKLEVIVWIGLSEEQLDIYKEYLNTRQVRRACSNNRD 420
Query: 593 GSP----LAALTILKKICDHPLLLTKRAAEDV-------LDGMDSMLNPEDAALA----- 636
GS L ++ L+ +C+HPL L A + LD + + +D L+
Sbjct: 421 GSKGMHVLRCISTLRTLCNHPLFLLPPAEQKWRTAFGISLDALPQNVEKDDLQLSIAKNE 480
Query: 637 ------------------EKLAM----HIADVAEKDDFQEQHDNISCKISFILSLLDKLI 674
+ AM H+ +DD + + + +S K+ + LL +L
Sbjct: 481 DNNDEDDDDDEDVTWIDNDDGAMDNYKHMIRALPQDDGR-KIEALSSKLQVLHCLLRRLK 539
Query: 675 PEGHNVLIFSQTRKMLNLIQESI-GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
GH VL+F ML+L+Q +I + G LRIDG+T +SDR + + FQ F+
Sbjct: 540 ENGHRVLLFCPWTSMLDLVQYTILRTDGMSCLRIDGSTPSSDRQRKIRKFQNSKKYFAFV 599
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
L+++ G +GLTLT ADRV+++ P+WNPS D+Q+V RAYRIGQ++DV+ YRL+ GT+EE+
Sbjct: 600 LSTRCGHVGLTLTAADRVVLISPSWNPSDDDQAVARAYRIGQRRDVIAYRLVCSGTIEER 659
Query: 794 IYRKQIFKGGLFKTATEHKEQIR 816
I+++++ K G K E K+Q +
Sbjct: 660 IFQREVTKIGDSKVILEDKDQAK 682
>gi|355782959|gb|EHH64880.1| hypothetical protein EGM_18210, partial [Macaca fascicularis]
Length = 1845
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1252 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1311
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1312 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1371
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1372 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1419
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1420 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1479
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1480 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1531
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1532 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1585
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE EKLA+ + + D Q + K+S + LL
Sbjct: 1586 -------HPEFKTTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1630
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1631 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1690
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1691 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1750
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1751 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1800
>gi|380817758|gb|AFE80753.1| TATA-binding protein-associated factor 172 [Macaca mulatta]
gi|383422637|gb|AFH34532.1| TATA-binding protein-associated factor 172 [Macaca mulatta]
Length = 1849
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1256 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1316 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1375
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1376 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1423
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1424 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1483
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1484 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1535
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1536 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1589
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE EKLA+ + + D Q + K+S + LL
Sbjct: 1590 -------HPEFKTTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1634
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1635 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1694
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1695 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1754
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1755 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1804
>gi|342877624|gb|EGU79073.1| hypothetical protein FOXB_10412 [Fusarium oxysporum Fo5176]
Length = 1895
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 187/566 (33%), Positives = 280/566 (49%), Gaps = 65/566 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1296 FQIPVAIKAELRSYQQEGVNWLNFLNKYHLHGILCDDMGLGKTLQTLCIVASDHHQRAEE 1355
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ + Y G + + ++ L +
Sbjct: 1356 FAKTQAPDVRKLPSLIVCPPTLSGHWQQEIKTYAPFLSVTAYVGPPAERKA--MKDRLGE 1413
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+++ L D W+Y++LDEGHLIKNP + +++ ++
Sbjct: 1414 TDIVVTSYDVCRNDAEVL------------DKHSWNYVVLDEGHLIKNPKAKITQAVKKL 1461
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1462 TSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKASSKEQE 1521
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1522 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQQKLFEDF 1573
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
+ + A G AL ++K+C+ P ++ K S L E
Sbjct: 1574 TKKQGKKIQAEAGREDKEAKQHIFQALQYMRKLCNSPAMVMKPG---------STLYDET 1624
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILS-----LLDKLIPEGHNVLIFSQT 686
+ K I D D + C I S L + P H LIF Q
Sbjct: 1625 QKILAKQGTSIEDAQHAPKLTALRDLLVDCGIGVEGSDSNDPLYQPIKP--HRALIFCQM 1682
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + + LR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1683 KEMLDMVQNKVLKELLPSVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGL 1742
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1743 NLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1802
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D ++L L
Sbjct: 1803 VASTVV--NQQNAGLSTMDTDQILDL 1826
>gi|224052611|ref|XP_002191629.1| PREDICTED: TATA-binding protein-associated factor 172 [Taeniopygia
guttata]
Length = 1844
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 288/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-------- 345
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG
Sbjct: 1250 YEIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAQE 1309
Query: 346 LFHSRLIKR----ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++L+ +LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1310 YARTKLVDSVPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHQVKR 1369
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1370 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1417
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1418 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1477
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1478 AGVLAMEALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCILSPLQVQLYEDF 1529
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V S G AL L+K+C+HP L+LT +
Sbjct: 1530 AKSRAKCDIDETVSSISLNEETEKPKLKSTGHVFQALQYLRKLCNHPALVLTTQ------ 1583
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + E+LA A + D Q + K+S + LL
Sbjct: 1584 -------HPEYKRITEQLA---AQNSSLRDIQH-----APKLSALKQLLLDCGLGNGGSS 1628
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H VLIF Q + ML++++ + +LR+DG+ A R IV+ F
Sbjct: 1629 ESGTEAVVAQHRVLIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQRHSIVSRFN 1688
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1689 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1748
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ + L +L +L K G
Sbjct: 1749 ITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTEQLLDLFTLDKDG 1798
>gi|380492422|emb|CCF34613.1| SNF2 super family protein, partial [Colletotrichum higginsianum]
Length = 1887
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 275/538 (51%), Gaps = 61/538 (11%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL- 351
++ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1291 SFQIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTICMVASDHHQRAE 1350
Query: 352 ---------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
++R +LVV P TL HW +E+ + Y G + + ++ L
Sbjct: 1351 EFEKTGAPDVRRLPSLVVCPPTLSGHWQQEIKTYAPFLSVTAYVGPPAERKS--MKDSLD 1408
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++T+YD+ RN++ L + W+Y+ILDEGHLIKNP + ++ +
Sbjct: 1409 KTDIVVTSYDVCRNDADVLAKYN------------WNYVILDEGHLIKNPKAKITIAVKK 1456
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1457 LASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKASSKEQ 1516
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK EV DD L K + L+ Q++L++
Sbjct: 1517 EAGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSDLQKKLFDD 1568
Query: 581 F-------LNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
F L E D AL ++K+C+ P ++ K + D +L+ +
Sbjct: 1569 FTRKQGKKLQEEAGREDKDAKSHIFQALQYMRKLCNSPAMVMK-PGHGMYDETQRILSKQ 1627
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILS-----LLDKLIPEGHNVLIFSQT 686
+L + + H + D + C I + L + P H L+F Q
Sbjct: 1628 GTSLEDPV--HAPKLTALRDLL-----VDCGIGVEEAESNDPLYQPIKP--HRALVFCQM 1678
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q ++ G +LR+DG +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1679 KEMLDMVQNTVLKSMLPGVTYLRLDGGVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGL 1738
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1739 NLTGADTVIFVEHDWNPQKDMQAMDRAHRIGQKKVVNVYRLVTRGTLEEKILSLQRFK 1796
>gi|134112447|ref|XP_775199.1| hypothetical protein CNBE4720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257851|gb|EAL20552.1| hypothetical protein CNBE4720 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1848
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 186/536 (34%), Positives = 272/536 (50%), Gaps = 62/536 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P +I L +Q++G+ WL L GIL DDMGLGK++Q +A H R +
Sbjct: 1271 YQIPVEIKAELRQYQKDGVSWLAFLAKYQLHGILCDDMGLGKSLQSICIIASKHHERAER 1330
Query: 354 R------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+L+V P TL HW E+ + +Y G+ + + L+ L
Sbjct: 1331 HKATQSIDSAHLPSLIVCPPTLTGHWYHEILKFAPHLRAVQYVGSTFE--RATLRRSLSS 1388
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++++Y+ VR++ L SF+ Y +LDEGH+IKN T+ A ++ +I
Sbjct: 1389 YDVVISSYECVRSDISELSKFSFL------------YCVLDEGHIIKNTKTKLAVAVKQI 1436
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+++SGTPIQNN+ ELW+LF+F P LG+ + F EK+ PIL + A +E+
Sbjct: 1437 KAQHRLLLSGTPIQNNVLELWSLFDFLMPGFLGNERTFNEKFSKPILADREGKATPKERE 1496
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
+ + L +++ P+ LRRLK +V ++ L K + L+ Q+QLYE F
Sbjct: 1497 AAANALEALHKQVLPFLLRRLKEDVLND--------LPPKIIQDYYCELSPVQQQLYEEF 1548
Query: 582 LNS--------EIVLSAF---DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP 630
S EI SA G +L L+K+C+HP L VLDG
Sbjct: 1549 SRSKAAEEAGMEIETSASKEGQGHVFQSLQYLRKLCNHPAL--------VLDGEPQRFKE 1600
Query: 631 EDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE--GHNVLIFSQTRK 688
+ +H A K + +Q C I +DKL + H VLIF Q R
Sbjct: 1601 IQKKIGGGPELHDLSHAPKMEALKQLLQ-DCGIGLP---VDKLADDVTTHRVLIFCQLRP 1656
Query: 689 MLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTL 745
ML++I++ + ++R+DG+T R IV F + LLT+ VGGLGL L
Sbjct: 1657 MLDIIEKDLFGTHMPTVSYMRLDGSTDPRKRHAIVQTFNADPRIDVLLLTTSVGGLGLNL 1716
Query: 746 TKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
T AD VI VD WNP D Q++DRA+R+GQ+K V VYRL+T GT+EEKI Q FK
Sbjct: 1717 TGADTVIFVDHDWNPMKDLQAMDRAHRLGQRKVVNVYRLITRGTLEEKIMGLQRFK 1772
>gi|348541127|ref|XP_003458038.1| PREDICTED: TATA-binding protein-associated factor 172 [Oreochromis
niloticus]
Length = 1860
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 280/579 (48%), Gaps = 72/579 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG + R +
Sbjct: 1263 YKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQE 1322
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1323 YAKTKAADCSPLPSLVVCPPTLTGHWVDEVGKFCAKEYLNPLHYTGPPTERMRLQHQVKK 1382
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1383 HNLVVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAIKQL 1430
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ R+I+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1431 AANFRVILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQE 1490
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1491 AGVLAMEALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCNLSPLQVQLYEDF 1542
Query: 582 LNSEIVLSAFD------------------GSPLAALTILKKICDHP-LLLTKRAAE---- 618
S S D G AL L+K+C+HP L+LT + E
Sbjct: 1543 AKSRAKASVDDSISVASTEEEEKPKLKATGHVFQALQYLRKLCNHPSLVLTPQHPEYKRI 1602
Query: 619 -DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
+ L G +S L D A KL+ ++ + + +
Sbjct: 1603 TEQLAGQNSSL--RDIQHAPKLSA----------LKQLLLDCGLGGGGGSEGGTEAVVAQ 1650
Query: 678 HNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLL 734
H VLIF Q + ML++++ + +LR+DG+ +A R IV+ F + LL
Sbjct: 1651 HRVLIFCQLKSMLDIVEHDLLKPRLPTVTYLRLDGSVQAGQRHSIVSRFNNDPSIDVLLL 1710
Query: 735 TSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI 794
T+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL+T GT+EEKI
Sbjct: 1711 TTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKI 1770
Query: 795 YRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQ 832
Q FK + T ++ ++ L L +L K+
Sbjct: 1771 MGLQKFKMSIANTVISQENASLQSMGTDQLLNLFTLDKE 1809
>gi|255076351|ref|XP_002501850.1| SNF2 super family [Micromonas sp. RCC299]
gi|226517114|gb|ACO63108.1| SNF2 super family [Micromonas sp. RCC299]
Length = 1989
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 209/390 (53%), Gaps = 66/390 (16%)
Query: 286 TLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG 345
T GPR + L G + + L+ HQR+G+RW+W+L G+GGIL DDMGLGKT+Q+ F +G
Sbjct: 322 TEGGPR--FELAGDLASRLYDHQRDGVRWMWNLQLLGRGGILADDMGLGKTLQVAAFASG 379
Query: 346 LFHSRLIKRALVVAPKTLLSHWIKELTAVGL--SAKIREYFGTCVKT-RQYELQYVLQDK 402
L S +R LV+AP TLL HW KE GL + ++ G + R L V
Sbjct: 380 LLRSGAARRFLVLAPTTLLPHWHKEFIVAGLRDGVNLHKFAGGGSRADRDRALSKVRAHG 439
Query: 403 GVLLTTYDIVRNNSKSL-----------------RGSSFISDE--AGDDDAIWDYMILDE 443
GVLLTTY +V +N SL RG++ + + G + WD+++ DE
Sbjct: 440 GVLLTTYGMVLHNDDSLGAPASEEDAEKVAAASGRGAAVAAQDMPPGAKELHWDWIVCDE 499
Query: 444 GHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKY 503
GH +KNP+ Q + + +PS+HR+II+GTPIQN+L ELWAL++ CCP LLGD F+ +Y
Sbjct: 500 GHKLKNPNAQLPRKVRTLPSSHRLIITGTPIQNHLAELWALYDLCCPGLLGDEAEFRREY 559
Query: 504 ELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFH--------------- 548
I G + A R++ G+ ++ELR + +P+ LRR K+ V
Sbjct: 560 SKKIAAGQSRDATQRQRSAGARASEELRNKCKPFMLRREKSSVLARAKEEEEKERKAAQN 619
Query: 549 --------------EDDVTSSAT-----------LSKKNEMIVWLRLTSCQRQLYEAFLN 583
+ +S T L KN++IVWL L Q +LY AFL
Sbjct: 620 DPEARNAAAAAAGPRTSIEASTTGWAGVKHAPQQLGTKNDLIVWLPLRPAQERLYRAFLK 679
Query: 584 SEIVLSAFD--GSPLAALTILKKICDHPLL 611
S V SA + GS L+A+ ILKKICDHP L
Sbjct: 680 SNTVRSALNKTGSALSAINILKKICDHPAL 709
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 143/225 (63%), Gaps = 1/225 (0%)
Query: 658 NISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRV 717
+ S K +F++SLL L GH L+FSQ+R ML++++ + + G+ +RIDG A +R
Sbjct: 783 DASGKCAFLMSLLRHLASSGHRTLVFSQSRAMLDVLESAARADGHDLVRIDGKVPADERH 842
Query: 718 KIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKK 777
V FQ P+ LLTSQVGGLGLTLT ADRV++ DPAWNP+ D+QSVDRAYRIGQ K
Sbjct: 843 ARVERFQSTPSIPLALLTSQVGGLGLTLTAADRVVIYDPAWNPAADSQSVDRAYRIGQTK 902
Query: 778 DVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVS 837
DVVVYRL+TCGTVEEK+YR+Q+FKGGL + T+ RYFS + +L S
Sbjct: 903 DVVVYRLVTCGTVEEKVYRRQVFKGGLSRAGTQDGNHFRYFSADETSQLFEFSDDAARGS 962
Query: 838 LTQQQLHEEHGDQHNMDESL-EAHIQFLDTLGIAGVSHHSLLFSK 881
TQ++L H Q L ++ LG GVS H LLFSK
Sbjct: 963 KTQKELERLHAHQRRWTAELANVEAPVIERLGCVGVSDHDLLFSK 1007
>gi|58267652|ref|XP_570982.1| helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57227216|gb|AAW43675.1| helicase, putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 1848
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 186/536 (34%), Positives = 272/536 (50%), Gaps = 62/536 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P +I L +Q++G+ WL L GIL DDMGLGK++Q +A H R +
Sbjct: 1271 YQIPVEIKAELRQYQKDGVSWLAFLAKYQLHGILCDDMGLGKSLQSICIIASKHHERAER 1330
Query: 354 R------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+L+V P TL HW E+ + +Y G+ + + L+ L
Sbjct: 1331 HKATQSIDSAHLPSLIVCPPTLTGHWYHEILKFAPHLRAVQYVGSTFE--RATLRRSLSS 1388
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++++Y+ VR++ L SF+ Y +LDEGH+IKN T+ A ++ +I
Sbjct: 1389 YDVVISSYECVRSDISELSKFSFL------------YCVLDEGHIIKNTKTKLAVAVKQI 1436
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+++SGTPIQNN+ ELW+LF+F P LG+ + F EK+ PIL + A +E+
Sbjct: 1437 KAQHRLLLSGTPIQNNVLELWSLFDFLMPGFLGNERTFNEKFSKPILADREGKATPKERE 1496
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
+ + L +++ P+ LRRLK +V ++ L K + L+ Q+QLYE F
Sbjct: 1497 AAANALEALHKQVLPFLLRRLKEDVLND--------LPPKIIQDYYCELSPVQQQLYEEF 1548
Query: 582 LNS--------EIVLSAF---DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP 630
S EI SA G +L L+K+C+HP L VLDG
Sbjct: 1549 SRSKAAEEAGMEIETSASKEGQGHVFQSLQYLRKLCNHPAL--------VLDGEPQRFKE 1600
Query: 631 EDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE--GHNVLIFSQTRK 688
+ +H A K + +Q C I +DKL + H VLIF Q R
Sbjct: 1601 IQKKIGGGPELHDLSHAPKMEALKQLLQ-DCGIGLP---VDKLADDVTTHRVLIFCQLRP 1656
Query: 689 MLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTL 745
ML++I++ + ++R+DG+T R IV F + LLT+ VGGLGL L
Sbjct: 1657 MLDIIEKDLFGTHMPTVSYMRLDGSTDPRKRHAIVQTFNADPRIDVLLLTTSVGGLGLNL 1716
Query: 746 TKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
T AD VI VD WNP D Q++DRA+R+GQ+K V VYRL+T GT+EEKI Q FK
Sbjct: 1717 TGADTVIFVDHDWNPMKDLQAMDRAHRLGQRKVVNVYRLITRGTLEEKIMGLQRFK 1772
>gi|91088413|ref|XP_966659.1| PREDICTED: similar to TATA-binding protein-associated factor 172
[Tribolium castaneum]
gi|270011757|gb|EFA08205.1| hypothetical protein TcasGA2_TC005832 [Tribolium castaneum]
Length = 1810
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 280/541 (51%), Gaps = 65/541 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y++P I L +Q+ G+ WL L+ GIL DDMGLGKT+Q LAG + R K
Sbjct: 1225 YVVPVPIAAELRSYQQAGVNWLAFLNKYKLHGILCDDMGLGKTIQSICMLAGDHYYRDQK 1284
Query: 354 R------------ALVVAPKTLLSHWIKELTAVGLSAKIR---EYFGTCVKTRQYELQYV 398
+LV+ P TL HW+ E+ LS K +Y G+ T + +L++
Sbjct: 1285 YKETKSADCAPLPSLVICPPTLTGHWVYEVEKF-LSHKYLKPLQYNGS--PTEREKLRHK 1341
Query: 399 LQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL 458
+ +++ +YDIVR D A + W+Y+ILDEGH+IKN T+ + ++
Sbjct: 1342 FKKHNLIVASYDIVRK------------DIAVFSNIKWNYIILDEGHVIKNGKTRTSMAI 1389
Query: 459 LEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDR 518
+ + +R+I+SGTPIQNN+ ELW+LF+F P LG K F +Y PIL D +L +
Sbjct: 1390 KNLVANYRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFTARYSRPILASRDPKSLPK 1449
Query: 519 EKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY 578
E+ G+ + L ++ P+ LRR+K +V DD+ T + L+ Q +LY
Sbjct: 1450 EQEAGALAMEALHRQVLPFLLRRVKEDVL--DDLPPKITQD------YYCELSPLQERLY 1501
Query: 579 EAF------------LNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGM 624
E F ++S S+ G+ AL L+ +C+HP L+ A+ +
Sbjct: 1502 EDFSKSQAHQTLQESISSGATASSMQGNTHIFQALRYLQNVCNHPKLVLN-ASHPQYGKI 1560
Query: 625 DSMLNPEDAALAEKLAMHIADV-AEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIF 683
+ L +D+ L + H A + A K Q+ C I +L+ H L+F
Sbjct: 1561 LADLQTQDSKLDD--ISHSAKLPALKQLLQD------CGIGVTEPQSTELVVNQHRALVF 1612
Query: 684 SQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
Q + ML++I++ + K G +LR+DG+ S R +V F + LLT+QVGG
Sbjct: 1613 CQLKAMLDIIEKDLFKKHMPGVTYLRLDGSIPPSQRHSVVTRFNNDPSIDVLLLTTQVGG 1672
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LGL LT AD VI V+ WNP D Q++DRA+RIGQ+K V VYRL+T T+EEKI Q F
Sbjct: 1673 LGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQRKVVNVYRLITRATLEEKIMGLQKF 1732
Query: 801 K 801
K
Sbjct: 1733 K 1733
>gi|348553264|ref|XP_003462447.1| PREDICTED: TATA-binding protein-associated factor 172-like [Cavia
porcellus]
Length = 1904
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1311 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1370
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1371 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1430
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1431 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1478
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1479 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYSKPILASRDARSSSREQE 1538
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1539 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1590
Query: 582 LN-----------SEIVLSAFDGSP--------LAALTILKKICDHP-LLLTKRAAEDVL 621
S + LS P AL L+K+C+HP L+LT +
Sbjct: 1591 AKSRAKCDVEETVSSVALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTAQ------ 1644
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 1645 -------HPEFKNITEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1689
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1690 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1749
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1750 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1809
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1810 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1859
>gi|332212317|ref|XP_003255267.1| PREDICTED: LOW QUALITY PROTEIN: TATA-binding protein-associated
factor 172 [Nomascus leucogenys]
Length = 1849
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1256 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1316 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1375
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1376 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1423
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1424 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1483
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1484 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1535
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E SA G AL L+K+C+HP L+LT +
Sbjct: 1536 AKSRAKCDVDETXSSAALSEETEKPKLKXTGHVFQALQYLRKLCNHPALVLTPQ------ 1589
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE AEKLA+ + + D Q + K+S + LL
Sbjct: 1590 -------HPEFKTTAEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1634
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1635 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1694
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1695 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1754
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1755 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1804
>gi|26353950|dbj|BAC40605.1| unnamed protein product [Mus musculus]
Length = 594
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQE 60
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 61 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 120
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 121 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 168
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 169 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 228
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 229 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 280
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 281 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 334
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKL + + + D Q + K+S + LL
Sbjct: 335 -------HPEFKSTTEKLTVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSST 379
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 380 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 439
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 440 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 499
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 500 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 549
>gi|359080006|ref|XP_003587915.1| PREDICTED: TATA-binding protein-associated factor 172-like [Bos
taurus]
Length = 1914
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 283/590 (47%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1321 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1380
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1381 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1440
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1441 HNLVVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1488
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1489 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1548
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1549 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1600
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1601 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1654
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE EKLA A + D Q + K+S + LL
Sbjct: 1655 -------HPEFKNTTEKLA---AQNSSLHDIQH-----APKLSALKQLLLDCGLGNGSTS 1699
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1700 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1759
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1760 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1819
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1820 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1869
>gi|402880936|ref|XP_003904042.1| PREDICTED: LOW QUALITY PROTEIN: TATA-binding protein-associated
factor 172 [Papio anubis]
Length = 1841
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1248 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1307
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1308 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1367
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1368 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1415
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1416 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1475
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1476 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1527
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1528 AKSRAKCDXDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1581
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE EKLA+ + + D Q + K+S + LL
Sbjct: 1582 -------HPEFKTTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1626
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1627 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1686
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1687 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1746
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1747 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1796
>gi|300793896|ref|NP_001178846.1| TATA-binding protein-associated factor 172 precursor [Rattus
norvegicus]
Length = 1855
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1262 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQE 1321
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1322 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1381
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1382 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1429
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1430 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1489
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1490 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1541
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1542 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1595
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE EKLA+ + + D Q + K+S + LL
Sbjct: 1596 -------HPEFKNTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGTSS 1640
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1641 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1700
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1701 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1760
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1761 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1810
>gi|256269976|gb|EEU05227.1| Mot1p [Saccharomyces cerevisiae JAY291]
Length = 1867
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 186/570 (32%), Positives = 285/570 (50%), Gaps = 66/570 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--- 350
+ LP I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A + R
Sbjct: 1262 FKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKED 1321
Query: 351 ------LIKRAL---VVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+ RAL ++ P +L HW E K+ Y G T + L+ L D
Sbjct: 1322 YEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGG--PTVRLTLRPQLSD 1379
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ L + + +Y +LDEGH+IKN ++ AK++ EI
Sbjct: 1380 ADIIVTSYDVARNDLAVLNKTEY------------NYCVLDEGHIIKNSQSKLAKAVKEI 1427
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1428 TANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQE 1487
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L +++ P+ LRRLK +V + L K + L Q+QLY F
Sbjct: 1488 AGVLALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELGDLQKQLYMDF 1539
Query: 582 LNSE--IVLSAFDGSPLA--------ALTILKKICDHPLLLTKRAAEDVLDGMDSM---- 627
+ +V + S +A AL ++K+C+HP L+ + D +
Sbjct: 1540 TKKQKNVVEKDIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTG 1599
Query: 628 LNPEDAALAEKLA-----MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLI 682
L+ D A KL+ + + E+D ++ + + I ++S H LI
Sbjct: 1600 LDLHDIINAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVIS--------QHRALI 1651
Query: 683 FSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q + ML++++ + K ++R+DG+ DR K+V F E LLT++VG
Sbjct: 1652 FCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVG 1711
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q
Sbjct: 1712 GLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQK 1771
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
FK + T +Q + D +LL L
Sbjct: 1772 FKMNIASTVV--NQQNSGLASMDTHQLLDL 1799
>gi|392295928|gb|EIW07031.1| Mot1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1842
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 186/570 (32%), Positives = 285/570 (50%), Gaps = 66/570 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--- 350
+ LP I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A + R
Sbjct: 1237 FKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKED 1296
Query: 351 ------LIKRAL---VVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+ RAL ++ P +L HW E K+ Y G T + L+ L D
Sbjct: 1297 YEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGG--PTVRLTLRPQLSD 1354
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ L + + +Y +LDEGH+IKN ++ AK++ EI
Sbjct: 1355 ADIIVTSYDVARNDLAVLNKTEY------------NYCVLDEGHIIKNSQSKLAKAVKEI 1402
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1403 TANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQE 1462
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L +++ P+ LRRLK +V + L K + L Q+QLY F
Sbjct: 1463 AGVLALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELGDLQKQLYMDF 1514
Query: 582 LNSE--IVLSAFDGSPLA--------ALTILKKICDHPLLLTKRAAEDVLDGMDSM---- 627
+ +V + S +A AL ++K+C+HP L+ + D +
Sbjct: 1515 TKKQKNVVEKDIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTG 1574
Query: 628 LNPEDAALAEKLA-----MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLI 682
L+ D A KL+ + + E+D ++ + + I ++S H LI
Sbjct: 1575 LDLHDIINAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVIS--------QHRALI 1626
Query: 683 FSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q + ML++++ + K ++R+DG+ DR K+V F E LLT++VG
Sbjct: 1627 FCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVG 1686
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q
Sbjct: 1687 GLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQK 1746
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
FK + T +Q + D +LL L
Sbjct: 1747 FKMNIASTVV--NQQNSGLASMDTHQLLDL 1774
>gi|190407873|gb|EDV11138.1| helicase [Saccharomyces cerevisiae RM11-1a]
Length = 1867
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 186/570 (32%), Positives = 285/570 (50%), Gaps = 66/570 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--- 350
+ LP I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A + R
Sbjct: 1262 FKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKED 1321
Query: 351 ------LIKRAL---VVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+ RAL ++ P +L HW E K+ Y G T + L+ L D
Sbjct: 1322 YEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGG--PTVRLTLRPQLSD 1379
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ L + + +Y +LDEGH+IKN ++ AK++ EI
Sbjct: 1380 ADIIVTSYDVARNDLAVLNKTEY------------NYCVLDEGHIIKNSQSKLAKAVKEI 1427
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1428 TANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQE 1487
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L +++ P+ LRRLK +V + L K + L Q+QLY F
Sbjct: 1488 AGVLALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELGDLQKQLYMDF 1539
Query: 582 LNSE--IVLSAFDGSPLA--------ALTILKKICDHPLLLTKRAAEDVLDGMDSM---- 627
+ +V + S +A AL ++K+C+HP L+ + D +
Sbjct: 1540 TKKQKNVVEKDIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTG 1599
Query: 628 LNPEDAALAEKLA-----MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLI 682
L+ D A KL+ + + E+D ++ + + I ++S H LI
Sbjct: 1600 LDLHDIINAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVIS--------QHRALI 1651
Query: 683 FSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q + ML++++ + K ++R+DG+ DR K+V F E LLT++VG
Sbjct: 1652 FCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVG 1711
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q
Sbjct: 1712 GLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQK 1771
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
FK + T +Q + D +LL L
Sbjct: 1772 FKMNIASTVV--NQQNSGLASMDTHQLLDL 1799
>gi|358419111|ref|XP_003584129.1| PREDICTED: TATA-binding protein-associated factor 172-like [Bos
taurus]
Length = 1944
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 283/590 (47%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1351 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1410
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1411 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1470
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1471 HNLVVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1518
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1519 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1578
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1579 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1630
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1631 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1684
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE EKLA A + D Q + K+S + LL
Sbjct: 1685 -------HPEFKNTTEKLA---AQNSSLHDIQH-----APKLSALKQLLLDCGLGNGSTS 1729
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1730 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1789
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1790 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1849
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1850 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1899
>gi|123858774|ref|NP_001074175.1| TATA-binding protein-associated factor 172 [Mus musculus]
Length = 1848
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1255 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQE 1314
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1315 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1374
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1375 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1422
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1423 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1482
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1483 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1534
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1535 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1588
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKL + + + D Q + K+S + LL
Sbjct: 1589 -------HPEFKSTTEKLTVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSST 1633
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1634 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1693
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1694 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1753
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1754 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1803
>gi|6325175|ref|NP_015243.1| Mot1p [Saccharomyces cerevisiae S288c]
gi|417308|sp|P32333.1|MOT1_YEAST RecName: Full=TATA-binding protein-associated factor MOT1;
Short=TBP-associated factor MOT1; AltName: Full=Modifier
of transcription 1
gi|171965|gb|AAA34786.1| Mot1 [Saccharomyces cerevisiae]
gi|1147612|gb|AAB68257.1| Mot1p: a putative helicase [Saccharomyces cerevisiae]
gi|151942715|gb|EDN61061.1| modifier of transcription [Saccharomyces cerevisiae YJM789]
gi|285815459|tpg|DAA11351.1| TPA: Mot1p [Saccharomyces cerevisiae S288c]
Length = 1867
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 186/570 (32%), Positives = 285/570 (50%), Gaps = 66/570 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--- 350
+ LP I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A + R
Sbjct: 1262 FKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKED 1321
Query: 351 ------LIKRAL---VVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+ RAL ++ P +L HW E K+ Y G T + L+ L D
Sbjct: 1322 YEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGG--PTVRLTLRPQLSD 1379
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ L + + +Y +LDEGH+IKN ++ AK++ EI
Sbjct: 1380 ADIIVTSYDVARNDLAVLNKTEY------------NYCVLDEGHIIKNSQSKLAKAVKEI 1427
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1428 TANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQE 1487
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L +++ P+ LRRLK +V + L K + L Q+QLY F
Sbjct: 1488 AGVLALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELGDLQKQLYMDF 1539
Query: 582 LNSE--IVLSAFDGSPLA--------ALTILKKICDHPLLLTKRAAEDVLDGMDSM---- 627
+ +V + S +A AL ++K+C+HP L+ + D +
Sbjct: 1540 TKKQKNVVEKDIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTG 1599
Query: 628 LNPEDAALAEKLA-----MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLI 682
L+ D A KL+ + + E+D ++ + + I ++S H LI
Sbjct: 1600 LDLHDIINAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVIS--------QHRALI 1651
Query: 683 FSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q + ML++++ + K ++R+DG+ DR K+V F E LLT++VG
Sbjct: 1652 FCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVG 1711
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q
Sbjct: 1712 GLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQK 1771
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
FK + T +Q + D +LL L
Sbjct: 1772 FKMNIASTVV--NQQNSGLASMDTHQLLDL 1799
>gi|398846076|ref|ZP_10603077.1| DNA/RNA helicase, superfamily II, SNF2 family [Pseudomonas sp. GM84]
gi|398252945|gb|EJN38101.1| DNA/RNA helicase, superfamily II, SNF2 family [Pseudomonas sp. GM84]
Length = 1108
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 266/510 (52%), Gaps = 65/510 (12%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKR 354
LP ++ L P+Q++GL WL +L G GGILGDDMGLGKT+Q + L H RL
Sbjct: 630 LPTELNATLRPYQQQGLNWLQALREMGTGGILGDDMGLGKTLQTLAHLLLEKQHGRLANP 689
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
AL V P +L+ +W+ E ++ G +++ ++ L D ++LTTY +V
Sbjct: 690 ALAVMPTSLVPNWLDEAHRFAPGLRVLALHGPG-RSKHFD---KLGDYDLVLTTYALVPR 745
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+ LR + W ++LDE IK+ +++ A ++ E+ + R+ ++GTP+
Sbjct: 746 DLPHLR------------EKTWSVLVLDEAQNIKSSTSKAALAVCELQANQRLCLTGTPM 793
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
+NNL ELW+LF+F P LG+ K F ++Y PI R D L L RI
Sbjct: 794 ENNLGELWSLFHFLMPGWLGEVKRFNQEYRAPIERHGDSERL-----------AHLVSRI 842
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS 594
+P+ LRR K +V E L K EM+ W+ L+ QR YEA V A D
Sbjct: 843 RPFLLRRTKEQVATE--------LPAKTEMVHWVELSDAQRDTYEA------VRVAMD-- 886
Query: 595 PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQE 654
+K+ D + A+ + +D++L +L + + D
Sbjct: 887 --------RKVRDE--IARNGASRSQIVILDALLKLRQVCCDLRLVKGVESKGNQAD--- 933
Query: 655 QHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKAS 714
K+ +L +LD+L+ EG VL+FSQ ML LI+E + + ++ + G T+
Sbjct: 934 -----KGKLGALLEMLDELLSEGRRVLLFSQFTSMLALIEEELEKRKIRYSLLTGDTR-- 986
Query: 715 DRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIG 774
DR V FQ+GD + +FL++ + GG+GL LT AD VI DP WNP+++NQ+ DRAYRIG
Sbjct: 987 DRRTPVQQFQQGD-SEVFLISLKAGGVGLNLTAADTVIHFDPWWNPASENQATDRAYRIG 1045
Query: 775 QKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
Q K V V++L+T GTVEEKI + Q K L
Sbjct: 1046 QDKPVFVFKLITRGTVEEKIQQLQQEKAAL 1075
>gi|296220759|ref|XP_002756460.1| PREDICTED: TATA-binding protein-associated factor 172 [Callithrix
jacchus]
Length = 1849
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 194/588 (32%), Positives = 284/588 (48%), Gaps = 91/588 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1256 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1316 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERVRLQHQVKR 1375
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1376 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1423
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1424 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1483
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1484 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1535
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1536 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1589
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE EKLA+ + + D Q + K+S + LL
Sbjct: 1590 -------HPEFKTTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1634
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1635 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1694
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1695 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1754
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPK 831
+T GT+EEKI Q FK + T ++ ++ + L +L +L K
Sbjct: 1755 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTEQLLDLFTLDK 1802
>gi|431838986|gb|ELK00915.1| TATA-binding protein-associated factor 172 [Pteropus alecto]
Length = 1635
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1042 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1101
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1102 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1161
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1162 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1209
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1210 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1269
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1270 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1321
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1322 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1375
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 1376 -------HPEFKSTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1420
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1421 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1480
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1481 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1540
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1541 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1590
>gi|258576739|ref|XP_002542551.1| hypothetical protein UREG_02067 [Uncinocarpus reesii 1704]
gi|237902817|gb|EEP77218.1| hypothetical protein UREG_02067 [Uncinocarpus reesii 1704]
Length = 1870
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 279/566 (49%), Gaps = 63/566 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1269 FEIPVGIKAELRSYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1328
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P ++ HW +E+ Y G + ++ + L +
Sbjct: 1329 FARTQAPEVRRLPSLIICPPSVSGHWQQEIQQYAPFLSCVSYMGPPAERSKHRSR--LSE 1386
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ L S W+Y +LDEGHLIKNP + +++ I
Sbjct: 1387 VDIVITSYDICRNDNDILLPMS------------WNYCVLDEGHLIKNPRAKITQAVKRI 1434
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1435 QSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1494
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + QR+L+E F
Sbjct: 1495 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDPSELQRKLFEDF 1546
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L+ GS AL ++++C+ P L+ K PE
Sbjct: 1547 TKKEQKELAKKIGSTEKEAKEHIFQALQYMRRLCNSPALVVKEGHRQY---------PEV 1597
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKLIPEG-----HNVLIFSQT 686
+I D++ D I C I S +L H LIF Q
Sbjct: 1598 QKYLSDKRSNIRDISHAPKLTALRDLLIDCGIGVDPSTEGELTTAASYVSPHRALIFCQM 1657
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K ++LR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1658 KEMLDIVQNDVLKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGL 1717
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1718 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1777
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D +LL L
Sbjct: 1778 VASTVV--NQQNAGLSTMDTDQLLDL 1801
>gi|432115026|gb|ELK36664.1| TATA-binding protein-associated factor 172 [Myotis davidii]
Length = 1870
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 285/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1277 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1336
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1337 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1396
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1397 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1444
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1445 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1504
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1505 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSLLQVQLYEDF 1556
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1557 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1610
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 1611 -------HPEFKSTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1655
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1656 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHAIVSRFN 1715
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1716 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1775
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1776 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1825
>gi|291404432|ref|XP_002718428.1| PREDICTED: BTAF1 RNA polymerase II, B-TFIID transcription
factor-associated, 170kDa [Oryctolagus cuniculus]
Length = 1858
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1265 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1324
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1325 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1384
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1385 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1432
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1433 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1492
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1493 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1544
Query: 582 LN-----------SEIVLSAFDGSP--------LAALTILKKICDHP-LLLTKRAAEDVL 621
S + LS P AL L+K+C+HP L+LT +
Sbjct: 1545 AKSRAKCDVDETVSSVTLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTSQ------ 1598
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 1599 -------HPEFKSTTEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGGTS 1643
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1644 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1703
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1704 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1763
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1764 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1813
>gi|238814383|ref|NP_001154953.1| RAD54-like [Nasonia vitripennis]
Length = 749
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 298/564 (52%), Gaps = 75/564 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLAGLFHS----- 349
+ N+L PHQREG+++++ + G I+ D+MGLGKT+Q L L
Sbjct: 152 LCNVLRPHQREGVKFMYECVTGKRIEEAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAK 211
Query: 350 RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYF--GTCVKTRQYELQYVLQDKG---- 403
LI++A++VAP +L+ +W E+ L +++ G +L ++ G
Sbjct: 212 PLIEKAIIVAPSSLVKNWYNEIFK-WLQNRVKPLAIDGGSKSEIDAKLTGFMKTYGRRCA 270
Query: 404 --VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+L+ +Y+ R ++ L D+ G ++ DEGH +KN Q ++L+ +
Sbjct: 271 TPILIISYETFRLHAHVLH-----QDDVG-------LVLCDEGHRLKNSENQTYQALMGL 318
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ R+++SGTPIQN+L E ++L +F LLG F++K+E PILRG D A D+E++
Sbjct: 319 KAKRRVLLSGTPIQNDLLEYFSLIHFVNSGLLGTAAEFRKKFENPILRGQDAGATDKERQ 378
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK----KNEMIVWLRLTSCQRQL 577
I EL + +RR +SA LSK K+E++V +++T Q QL
Sbjct: 379 IAQERLTELVTVVNKCLIRR------------TSALLSKYLPLKHELVVCIKMTPLQTQL 426
Query: 578 YEAFLNSEIVLSAF--DG-------SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
Y+ F+ S+ + + DG S L+A+T+LKK+C+HP L+ ++ E+ DG +
Sbjct: 427 YKNFIKSDSIKKSMQDDGTAKKGSLSALSAITLLKKLCNHPDLVYEKIQENS-DGFEGAA 485
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL-DKLIPEGHNVLIFSQTR 687
A + K M + + + C ++FI S DK++ + S
Sbjct: 486 KLLPANYSTKEVM--------PELSGKLMVLDCLLAFIKSTTTDKIV-------LVSNYT 530
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLT 746
+ L+L + + YK++R+DGT R K+V++F D IF+L+S+ GG GL L
Sbjct: 531 QTLDLFERLCAKRKYKYVRLDGTMSIKKRAKVVDNFNNPDSGDFIFMLSSKAGGCGLNLV 590
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
A+R+++ DP WNP+ D+Q++ R +R GQKK VYR + GT+EEKI+++Q K L
Sbjct: 591 GANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLCTGTIEEKIFQRQAHKKALSS 650
Query: 807 TATEHKEQI-RYFSQQDLRELLSL 829
T + E + R+F+Q DLR+L SL
Sbjct: 651 TVVDQDEDVARHFTQNDLRDLFSL 674
>gi|119391227|dbj|BAF41982.1| TBP-associated factor 170 [Mus musculus]
Length = 1848
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1255 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQE 1314
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1315 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1374
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1375 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1422
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1423 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1482
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1483 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1534
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1535 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1588
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKL + + + D Q + K+S + LL
Sbjct: 1589 -------HPEFKSTTEKLTVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSST 1633
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1634 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1693
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1694 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1753
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1754 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1803
>gi|365762814|gb|EHN04347.1| Mot1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1837
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 186/570 (32%), Positives = 285/570 (50%), Gaps = 66/570 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--- 350
+ LP I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A + R
Sbjct: 1232 FKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKED 1291
Query: 351 ------LIKRAL---VVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+ RAL ++ P +L HW E K+ Y G T + L+ L D
Sbjct: 1292 YEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGG--PTVRLTLRPQLSD 1349
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ L + + +Y +LDEGH+IKN ++ AK++ EI
Sbjct: 1350 ADIIVTSYDVARNDLAVLNKTEY------------NYCVLDEGHIIKNSQSKLAKAVKEI 1397
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1398 TANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQE 1457
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L +++ P+ LRRLK +V + L K + L Q+QLY F
Sbjct: 1458 AGVLALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELGDLQKQLYMDF 1509
Query: 582 LNSE--IVLSAFDGSPLA--------ALTILKKICDHPLLLTKRAAEDVLDGMDSM---- 627
+ +V + S +A AL ++K+C+HP L+ + D +
Sbjct: 1510 TKKQKNVVEKDIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTG 1569
Query: 628 LNPEDAALAEKLA-----MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLI 682
L+ D A KL+ + + E+D ++ + + I ++S H LI
Sbjct: 1570 LDLHDIINAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVIS--------QHRALI 1621
Query: 683 FSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q + ML++++ + K ++R+DG+ DR K+V F E LLT++VG
Sbjct: 1622 FCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVG 1681
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q
Sbjct: 1682 GLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQK 1741
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
FK + T +Q + D +LL L
Sbjct: 1742 FKMNIASTVV--NQQNSGLASMDTHQLLDL 1769
>gi|410975679|ref|XP_003994258.1| PREDICTED: LOW QUALITY PROTEIN: TATA-binding protein-associated
factor 172 [Felis catus]
Length = 1849
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLG T+Q LAG R +
Sbjct: 1256 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGXTLQSICILAGDHCHRAQE 1315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1316 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERIRLQHQVKR 1375
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1376 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1423
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1424 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1483
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1484 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1535
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1536 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1589
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKLA+ + + D Q + K+S + LL
Sbjct: 1590 -------HPEFKSTTEKLAIQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTS 1634
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 1635 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1694
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 1695 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 1754
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1755 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1804
>gi|259150076|emb|CAY86879.1| Mot1p [Saccharomyces cerevisiae EC1118]
Length = 1842
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 186/570 (32%), Positives = 285/570 (50%), Gaps = 66/570 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--- 350
+ LP I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A + R
Sbjct: 1237 FKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKED 1296
Query: 351 ------LIKRAL---VVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+ RAL ++ P +L HW E K+ Y G T + L+ L D
Sbjct: 1297 YEKTRSVESRALLSLIICPPSLTGHWENEFDQYAPFLKVVVYAGG--PTVRLTLRPQLSD 1354
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ L + + +Y +LDEGH+IKN ++ AK++ EI
Sbjct: 1355 ADIIVTSYDVARNDLAVLNKTEY------------NYCVLDEGHIIKNSQSKLAKAVKEI 1402
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1403 TANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQE 1462
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L +++ P+ LRRLK +V + L K + L Q+QLY F
Sbjct: 1463 AGVLALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELGDLQKQLYMDF 1514
Query: 582 LNSE--IVLSAFDGSPLA--------ALTILKKICDHPLLLTKRAAEDVLDGMDSM---- 627
+ +V + S +A AL ++K+C+HP L+ + D +
Sbjct: 1515 TKKQKNVVEKDIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTG 1574
Query: 628 LNPEDAALAEKLA-----MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLI 682
L+ D A KL+ + + E+D ++ + + I ++S H LI
Sbjct: 1575 LDLHDIINAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVIS--------QHRALI 1626
Query: 683 FSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q + ML++++ + K ++R+DG+ DR K+V F E LLT++VG
Sbjct: 1627 FCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVG 1686
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q
Sbjct: 1687 GLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQK 1746
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
FK + T +Q + D +LL L
Sbjct: 1747 FKMNIASTVV--NQQNSGLASMDTHQLLDL 1774
>gi|395820800|ref|XP_003783747.1| PREDICTED: TATA-binding protein-associated factor 172 [Otolemur
garnettii]
Length = 1849
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 196/591 (33%), Positives = 282/591 (47%), Gaps = 93/591 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1256 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1316 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1375
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1376 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1423
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1424 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1483
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1484 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 1535
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 1536 AKSRAKCDVDETVSSAALSEDTEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 1589
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLL---------- 670
+PE + EKLA D HD + K+S + LL
Sbjct: 1590 -------HPEFKSTIEKLA---------DQNSSLHDIQHAPKLSALKQLLLDCGLGNGST 1633
Query: 671 ----DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDF 723
+ + H +LIF Q + ML++++ + +LR+DG+ R IV F
Sbjct: 1634 SESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVARF 1693
Query: 724 QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYR 783
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYR
Sbjct: 1694 NNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYR 1753
Query: 784 LMTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
L+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1754 LITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1804
>gi|357610923|gb|EHJ67216.1| putative TATA-binding protein-associated factor 172 [Danaus
plexippus]
Length = 1868
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 274/555 (49%), Gaps = 62/555 (11%)
Query: 268 NVLDDYSDDSVLEDEGSITLSGPRST--YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGG 325
N+L + D D+ L P+S Y +P + L +Q+ G+ WL L+ G
Sbjct: 1280 NMLQRRNRDKTFLDQ----LFNPKSIKDYKIPIPVTAELRSYQQAGVNWLRFLNEYKLHG 1335
Query: 326 ILGDDMGLGKTMQICGFLAGLFHSRLIKRA-----LVVAPKTLLSHWIKELTAVGLSAKI 380
+L DDMGLGKT+Q +AG + R A LVV P TL HW+ E+T +
Sbjct: 1336 VLCDDMGLGKTLQSVVVVAGSHYERAQSGAPQMPSLVVCPPTLTGHWVFEVTKFIPCQYL 1395
Query: 381 RE--YFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDY 438
+ Y G V+ + Q + +++ +YDIVR + G W+Y
Sbjct: 1396 KPLPYVGPPVERERLRAQVPFYN--LIVASYDIVRKDIDFFSGIK------------WNY 1441
Query: 439 MILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKW 498
ILDEGH+IKN T+ K++ +I + HR+I+SGTPIQNN+ ELW+LF+F P LLG +
Sbjct: 1442 CILDEGHVIKNGKTKAFKAIKQIVANHRLILSGTPIQNNVLELWSLFDFLMPGLLGSERQ 1501
Query: 499 FKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATL 558
F +Y P+L D A + G+ + L ++ P+ LRR+K +V E L
Sbjct: 1502 FTARYSRPLLAARDPRASPHHLQAGALACEALHRQVLPFLLRRVKEDVLRE--------L 1553
Query: 559 SKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRA 616
K + L+ QR+LYE F + A AL L+ +C+HP L+ +
Sbjct: 1554 PPKITQDYYCDLSPLQRRLYEHFSKEHMPQEATHSHTHVFQALHYLQNVCNHPKLVLVES 1613
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQE-------QHDNISCKISFILSL 669
+PE + ++LA A + DD Q + + C I +
Sbjct: 1614 ------------HPETNRVTQQLA---AAGSSLDDIQHGAKLPALKQLLLDCGIGSASTG 1658
Query: 670 LDKLIPEGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEG 726
+ + H LIF Q +KML+++++ + K +LR+DG+ R IV F
Sbjct: 1659 DESAVVSQHRALIFCQLKKMLDIVEKDLIQKHLPSVSYLRLDGSVPPHQRHAIVTRFNTD 1718
Query: 727 DVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMT 786
+ LLT+ VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T
Sbjct: 1719 VSIDVLLLTTAVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLIT 1778
Query: 787 CGTVEEKIYRKQIFK 801
T+EEKI Q FK
Sbjct: 1779 RDTLEEKIMGLQKFK 1793
>gi|452848318|gb|EME50250.1| hypothetical protein DOTSEDRAFT_68955 [Dothistroma septosporum NZE10]
Length = 1897
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 180/537 (33%), Positives = 273/537 (50%), Gaps = 59/537 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ G+L DDMGLGKT+Q +A H R
Sbjct: 1297 FTIPVAIKAELRSYQQEGVNWLAFLNRYHLHGVLCDDMGLGKTLQTLCIVASDHHLRAEE 1356
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P TL HW +E+ + Y G + + Q D
Sbjct: 1357 FAKTQAPDMQRMPSLIICPPTLTGHWKQEIRTYAPFLRAVAYAGPPSERGKVRDQLATAD 1416
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YDI RN+ L + W+Y +LDEGHLIKNP + ++ +
Sbjct: 1417 --VVITSYDISRNDVDILASIN------------WNYCVLDEGHLIKNPKAKVTIAVKRL 1462
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F++++ PI + +E+
Sbjct: 1463 ASNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQDRFAKPIAASRFAKSSSKEQE 1522
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L++ F
Sbjct: 1523 AGALAVESLHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKRLFDDF 1574
Query: 582 LNSEI-VLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L G+P AL ++K+C+ P ++ K + + ++L E+
Sbjct: 1575 NKKEAKSLQDMAGNPDKEAKTHIFQALQYMRKLCNSPAMVMKEGHKQYA-AIQALLAKEN 1633
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-----HNVLIFSQTR 687
+++ K H + D + C I + + G H LIF Q +
Sbjct: 1634 SSI--KDPKHAPKLTALRDLL-----VDCGIGADQGDSNAVPTAGQAVSQHRALIFCQMK 1686
Query: 688 KMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
+ML++++ ++ K G F R+DG+ +AS R IVN F LLT+ VGGLGL
Sbjct: 1687 EMLDMVENTVLKKMLPGVTFSRMDGSVEASKRQDIVNRFNSDPSIDCLLLTTSVGGLGLN 1746
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1747 LTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLVTRGTLEEKILNLQRFK 1803
>gi|255724726|ref|XP_002547292.1| TATA-binding protein associated factor MOT1 [Candida tropicalis
MYA-3404]
gi|240135183|gb|EER34737.1| TATA-binding protein associated factor MOT1 [Candida tropicalis
MYA-3404]
Length = 648
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 193/585 (32%), Positives = 286/585 (48%), Gaps = 87/585 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA 355
LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q ++ H R K A
Sbjct: 30 LPVTIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIMSSDHHIRAEKFA 89
Query: 356 ------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG 403
LV+ P +L HW +EL K+ Y G + + L+ + D
Sbjct: 90 ETGSAEYRRLPSLVICPPSLTGHWEQELNQYAPFMKVLVYAGN--PSIRAPLRSKIPDVD 147
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
V++T+YD+ RN+ + + + +Y +LDEGH+IKN ++ +KS+ + +
Sbjct: 148 VVVTSYDVARNDVEHVTLQDY------------NYCVLDEGHIIKNAGSKLSKSVKRVRA 195
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
HR+I+SGTPIQNN+ ELW+LF+F P LG K F EK+ PI + +E+ G
Sbjct: 196 EHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQEAG 255
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
+ + L +++ P+ LRRLK +V + L K + L+ QR+LY+ F
Sbjct: 256 ALALESLHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSDLQRKLYKDFAK 307
Query: 584 S--EIVLSAFDGSP-------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAA 634
S E + S GS AL ++K+C+HP L+ ++P+
Sbjct: 308 SQKESIKSEVQGSEKEGKTHVFQALQYMRKLCNHPSLV---------------MSPQHPK 352
Query: 635 LAEKLAMHIADVAEKDDFQE-------QHDNISCKISFILSLLDK---------LIPEG- 677
E ++ + DD + ++ + C I S +K + EG
Sbjct: 353 YPEINKFLVSRNSSLDDIEHAPKLLSLKNLLLECGIGTQDSDYNKSTKKKNQQLISAEGV 412
Query: 678 ---HNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPI 731
H LIF Q + ML++++ + K F+R+DG+T DR IV F E +
Sbjct: 413 ISQHRALIFCQLKDMLDMVENDLLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNEDPSIDV 472
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
LLT++VGGLGL LT AD VI V+ WNP D Q++DRA+R+GQKK V VYRL+T T+E
Sbjct: 473 LLLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRLITKDTLE 532
Query: 792 EKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDV 836
EKI Q FK + T +Q D +LL L FDV
Sbjct: 533 EKIMGLQKFKMNIASTIV--NQQNAGLQSMDTNQLLDL----FDV 571
>gi|407924250|gb|EKG17304.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 1920
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 180/541 (33%), Positives = 274/541 (50%), Gaps = 64/541 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H+R
Sbjct: 1317 FEIPVAIKAELRSYQQDGVNWLAFLNRYHLHGILCDDMGLGKTLQTICIVASDHHNRAEE 1376
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ Y G + + Q L D
Sbjct: 1377 YKKTGSPDVRRLPSLIVCPPTLSGHWQQEIRTYAPFLNPVAYVGPPAERAKVRAQ--LAD 1434
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN+ + + + W+Y +LDEGHLIKN T+ ++ +
Sbjct: 1435 ADIVITSYDICRNDIEVMAPLN------------WNYCVLDEGHLIKNSKTKTTYAVKRL 1482
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F++++ PI + +E+
Sbjct: 1483 VSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGSEKVFQDRFAKPIAASRFSKSSSKEQE 1542
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV DD L K + L+ QR+L+E F
Sbjct: 1543 AGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSDLQRRLFEDF 1594
Query: 582 LNSEIVLSAFDGSP---------LAALTILKKICDHPLLLTK---RAAEDVLDGM----D 625
E A + AL ++K+C+ P L+ K + +D+ +
Sbjct: 1595 TKKEGKTLAEKATSNDKESKQHIFQALQYMRKLCNSPALVMKPEHKQYQDIQHYLSKSGS 1654
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQE--QHDNISCKISFILSLLDKLIPEGHNVLIF 683
S+ +P A L + D E H ++ + H LIF
Sbjct: 1655 SLSDPAHAPKLNALRDLLLDCGIGTTPSEGAGHGDVPNAAEAV---------SPHRALIF 1705
Query: 684 SQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
Q ++ML+++Q+++ K +++R+DG +AS R +IVN F + LLT+ VGG
Sbjct: 1706 CQMKEMLDMVQDTVLKKMLPSVQYMRLDGGVEASRRQEIVNKFNSDPSYDVLLLTTSVGG 1765
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q F
Sbjct: 1766 LGLNLTGADTVIFVEHDWNPQKDMQAMDRAHRIGQKKVVNVYRIVTRGTLEEKILSLQRF 1825
Query: 801 K 801
K
Sbjct: 1826 K 1826
>gi|322698448|gb|EFY90218.1| TBP associated factor (Mot1), putative [Metarhizium acridum CQMa 102]
Length = 1893
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 281/560 (50%), Gaps = 53/560 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1293 FKIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRQEE 1352
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ + Y G + + ++ L +
Sbjct: 1353 FAKTGAADVRRLPSLIVCPPTLSGHWQQEIRTYAPFLTVTAYVGPPAERKA--MRDKLGE 1410
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN++ L D W+Y++LDEGHLIKNP + +++ +
Sbjct: 1411 TDIVVTSYDVCRNDTDIL------------DKHSWNYVVLDEGHLIKNPKAKITQAVKRL 1458
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1459 ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKASSKEQE 1518
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1519 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKKLFEDF 1570
Query: 582 -------LNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
L SE + AL ++K+C+ P ++ K V D +L +
Sbjct: 1571 TKKQGKKLQSEAGRDDKEAKQHIFQALQYMRKLCNSPAMVMK-PGTPVYDDTQKILQRQG 1629
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNL 692
++ + +H + D L + P H LIF Q ++ML++
Sbjct: 1630 TSIED--TIHAPKLTALKDLLVDCGIGGDDGDTNDPLYQPIKP--HRALIFCQMKEMLDM 1685
Query: 693 IQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKAD 749
+++ + + LR+DG+ +A+ R IVN F + LLT+ VGGLGL LT AD
Sbjct: 1686 VEKKVLKELLPSVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLTGAD 1745
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK + T
Sbjct: 1746 TVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKIDVASTVV 1805
Query: 810 EHKEQIRYFSQQDLRELLSL 829
+Q S D ++L L
Sbjct: 1806 --NQQNAGLSTMDTDQILDL 1823
>gi|156051590|ref|XP_001591756.1| hypothetical protein SS1G_07202 [Sclerotinia sclerotiorum 1980]
gi|154704980|gb|EDO04719.1| hypothetical protein SS1G_07202 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1805
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 269/539 (49%), Gaps = 63/539 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1206 FKIPVAIKAELRSYQQEGVNWLNFLNKYHLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1265
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L++ P TL HW +E+ Y G ++ Q L
Sbjct: 1266 FAKTGAPDSRRMPSLIICPPTLSGHWQQEIKTYAPFLTCTAYVGPPADRARFREQ--LGQ 1323
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+Y+I RN+ L + W+Y +LDEGHLIKNP + ++ +
Sbjct: 1324 TDIVITSYEICRNDVDVLSPLN------------WNYCVLDEGHLIKNPRAKTTIAVKRL 1371
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1372 LSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKSSSKEQE 1431
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV DD L K + L+ Q++L+E F
Sbjct: 1432 AGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSDLQKKLFEDF 1483
Query: 582 LNSE---IVLSAFDGSPLA------ALTILKKICDHPLLLTKRAAEDVLDGM-------D 625
E + A G A AL ++K+C+ P L+ K + D
Sbjct: 1484 TKKEGKTLAEKASSGDKEAKQHIFQALQYMRKLCNSPALVMKEGHKQYEDTQRLLAKQGT 1543
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQ 685
S+ +P A L + D + +++ I+ + SF+ H L+F Q
Sbjct: 1544 SLRDPIHAPKLTALRDLLVDCGIGTEPSSENE-ITTETSFV---------SPHRALVFCQ 1593
Query: 686 TRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML+++Q + K +FLR+DG+ A+ R IVN F + LLT+ VGGLG
Sbjct: 1594 MKEMLDMVQNDVLKKMLPSVQFLRMDGSVDANKRQDIVNKFNSDPSYDVLLLTTSVGGLG 1653
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
L LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1654 LNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFK 1712
>gi|62948072|gb|AAH94345.1| Btaf1 protein, partial [Mus musculus]
Length = 990
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 284/590 (48%), Gaps = 91/590 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 397 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQE 456
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 457 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 516
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 517 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 564
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 565 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 624
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 625 AGVLAMDALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDF 676
Query: 582 LNS-------EIVLSA------------FDGSPLAALTILKKICDHP-LLLTKRAAEDVL 621
S E V SA G AL L+K+C+HP L+LT +
Sbjct: 677 AKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQ------ 730
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL----------- 670
+PE + EKL + + + D Q + K+S + LL
Sbjct: 731 -------HPEFKSTTEKLTVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSST 775
Query: 671 ---DKLIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQ 724
+ + H +LIF Q + ML++++ + +LR+DG+ R IV+ F
Sbjct: 776 ESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 835
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
+ LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL
Sbjct: 836 NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRL 895
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
+T GT+EEKI Q FK + T ++ ++ L +L +L K G
Sbjct: 896 ITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 945
>gi|119187661|ref|XP_001244437.1| hypothetical protein CIMG_03878 [Coccidioides immitis RS]
gi|392871157|gb|EAS33032.2| TBP associated factor [Coccidioides immitis RS]
Length = 1905
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 186/566 (32%), Positives = 280/566 (49%), Gaps = 63/566 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1304 FEIPVGIKAELRSYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1363
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P ++ HW +E+ Y G + ++ + L +
Sbjct: 1364 FSRTQAPEVRRLPSLIICPPSVSGHWQQEIQQYAPFLTCVSYMGPPAERARHRPR--LTE 1421
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ + W+Y +LDEGHLIKNP + ++ I
Sbjct: 1422 VDIVITSYDICRNDNDIFAPMA------------WNYCVLDEGHLIKNPRAKITLAVKRI 1469
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1470 QSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1529
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + QR+L+E F
Sbjct: 1530 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDPSELQRKLFEDF 1581
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L+ GS AL ++++C+ P L+ K + + N
Sbjct: 1582 TKKEQKELAKKLGSTEKEAKEHIFQALQYMRRLCNSPALVVKEGHRQYQEVQRYLANKNS 1641
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKLIPEG-----HNVLIFSQT 686
+I D++ D I C I LS+ +L H LIF Q
Sbjct: 1642 ---------NIRDISHAPKLTALRDLLIDCGIGVDLSVEGELNTAASYVSPHRALIFCQM 1692
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K ++LR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1693 KEMLDIVQNDVLKKLLPSIQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGL 1752
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1753 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1812
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D +LL L
Sbjct: 1813 VASTVV--NQQNAGLSTMDTDQLLDL 1836
>gi|254577895|ref|XP_002494934.1| ZYRO0A13244p [Zygosaccharomyces rouxii]
gi|238937823|emb|CAR26001.1| ZYRO0A13244p [Zygosaccharomyces rouxii]
Length = 1883
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 192/591 (32%), Positives = 297/591 (50%), Gaps = 70/591 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A + ++
Sbjct: 1278 FKLPIAIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQAICIIAS---DQYLR 1334
Query: 354 R---------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
R +L+V P +L HW E KI Y G + +Y L+
Sbjct: 1335 RQDYEKTHSVETRPLPSLIVCPPSLTGHWEAEFEEYSPFLKIVVYAGG--PSTRYPLRDK 1392
Query: 399 LQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL 458
L + +++T+YD+ RN+ +S A D ++Y ILDEGH+IKN ++ AK++
Sbjct: 1393 LHEADIIVTSYDVARND---------LSVIAQFD---YNYCILDEGHIIKNAQSKLAKAV 1440
Query: 459 LEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDR 518
+ S HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + +
Sbjct: 1441 KQFRSNHRLILTGTPIQNNVVELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSK 1500
Query: 519 EKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY 578
E+ G+ + L +++ P+ LRRLK +V + L K L+ Q+QLY
Sbjct: 1501 EQEAGALALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYHCELSDLQKQLY 1552
Query: 579 EAFLNSEIVLSAFDGSPLA----------ALTILKKICDHPLLLTK------RAAEDVLD 622
E F + + D A AL ++K+C+HP L+ + E L
Sbjct: 1553 EDFSRKQKTVVQKDIENTADTDNKQHIFQALQYMRKLCNHPALVLSPDHPQLKQVESYLK 1612
Query: 623 GMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLI 682
+ ++ D + A KL + + ++ + EQ + ++ + S ++ + H LI
Sbjct: 1613 --QTHMDLHDISNAPKL-LALRNLLFECGIGEQDIDRKSPVNQLPSTVN--VISQHRALI 1667
Query: 683 FSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q + ML++++ + + ++R+DG+ +A DR K+V F E LLT++VG
Sbjct: 1668 FCQLKDMLDMVENDLFKRYMPSVTYMRLDGSVEARDRQKVVRKFNEDPSIDCLLLTTKVG 1727
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+R+GQKK V VYR++T GT+EEKI Q
Sbjct: 1728 GLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRIVTKGTLEEKIMGLQK 1787
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQ 850
FK + T +Q S + +LL L FD Q EE Q
Sbjct: 1788 FKMNIASTVV--NQQNNGLSSMNTNQLLDL----FDTDNVPSQEKEEKPSQ 1832
>gi|255935291|ref|XP_002558672.1| Pc13g02310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583292|emb|CAP91300.1| Pc13g02310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1908
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 271/538 (50%), Gaps = 61/538 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L P+Q++G+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1310 FEIPVAIKAELRPYQQDGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHMRAEE 1369
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P +L HW +E+ Y G + LQ +L
Sbjct: 1370 FAKSQSTDSRKLPSLIVCPPSLSGHWQQEVKQYAPFLSCIAYVGP--PAERTRLQPLLAT 1427
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YD+ RN++ L +F +Y +LDEGHLIKNP + S+ ++
Sbjct: 1428 TDVIVTSYDVCRNDNDILSPINF------------NYCVLDEGHLIKNPKAKITSSVKKL 1475
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1476 ASNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1535
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + Q++L+E F
Sbjct: 1536 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKIIQNYYCDPSELQKKLFEDF 1587
Query: 582 LNSE------IVLSAFDGSP---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E V SA G AL ++++C+ P L+ K + N
Sbjct: 1588 TKKEQKELADKVGSADRGDKEHIFQALQYMRRLCNSPALVVKEGHKQY--------NEVQ 1639
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQT 686
+ L+ K + +I DV+ D + C I + +L H L+F Q
Sbjct: 1640 SFLSAKRS-NIRDVSHAPKLNALKDLLVDCGIGLDHTAEGELDTGASYVSPHRALVFCQM 1698
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K ++LR+DG +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1699 KEMLDIVQNDVLKKLLPSVQYLRLDGGVEATKRQDIVNRFNTDPSYDVLLLTTSVGGLGL 1758
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1759 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1816
>gi|347966667|ref|XP_321235.5| AGAP001820-PA [Anopheles gambiae str. PEST]
gi|333469954|gb|EAA01172.6| AGAP001820-PA [Anopheles gambiae str. PEST]
Length = 2067
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 265/540 (49%), Gaps = 74/540 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
LP KI L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LA H R + R
Sbjct: 1454 LPVKINAELRSYQQSGVNWLWFLNRYKLHGILCDDMGLGKTLQAICILAADHHQRSLDRG 1513
Query: 355 -----ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
++V+ P TL HW+ E+ S +R + + +L+ L +++ +Y
Sbjct: 1514 CAQLPSIVICPPTLTGHWVYEVEKFLPSRFLRPLHYVGLPGNREQLRQKLGTYNLIVASY 1573
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
DIVR + + F S W+Y ILDEGH+IKN T+ +K++ ++ + HR+I+
Sbjct: 1574 DIVRKDIE------FFSS------VNWNYCILDEGHIIKNGRTKSSKAIKQLVANHRLIL 1621
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
SGTPIQNN+ ELW+LF+F P LG K F ++ PIL D + +E+ G+ +
Sbjct: 1622 SGTPIQNNVLELWSLFDFLMPGFLGTEKQFSTRFSRPILASRDPKSSPKEQEAGALAMEA 1681
Query: 530 LRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI--- 586
L ++ P+ LRR+K +V + L K + L+ Q +LYE F +
Sbjct: 1682 LHRQVLPFLLRRVKEDVLTD--------LPPKITQDLLCELSPLQERLYEDFSRMHLHSS 1733
Query: 587 ----VLSAFDGS----------PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
L DG AL L+ +C+HP L +L+P
Sbjct: 1734 DIRECLENIDGQMAGPANKKTHVFQALRYLQNVCNHPKL---------------VLSPSH 1778
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL--------DKLIPEGHNVLIFS 684
+ + + DD + S K+ + LL + + H LIF
Sbjct: 1779 PEYQMIVGEFTRNGSSMDDIEH-----SAKLPVLKQLLLDCGIGTNEDVSVNQHRALIFC 1833
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q + ML++++ + K +LR+DG+ S R IV F + LLT+QVGGL
Sbjct: 1834 QLKAMLDIVENDLLKKHLPAVSYLRLDGSVPPSTRHHIVTKFNGDPSIDVLLLTTQVGGL 1893
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI Q FK
Sbjct: 1894 GLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRKSLEEKIMGLQKFK 1953
>gi|322707181|gb|EFY98760.1| TBP associated factor (Mot1), putative [Metarhizium anisopliae ARSEF
23]
Length = 1895
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 281/560 (50%), Gaps = 53/560 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1295 FKIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRQEE 1354
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ + Y G + + ++ L +
Sbjct: 1355 FAKTGAADVRRLPSLIVCPPTLSGHWQQEIRTYAPFLTVTAYVGPPAERKA--IRDKLGE 1412
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN++ L S W+Y++LDEGHLIKNP + +++ +
Sbjct: 1413 TDIVVTSYDVCRNDTDILGKHS------------WNYVVLDEGHLIKNPKAKITQAVKRL 1460
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1461 ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKASSKEQE 1520
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1521 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKKLFEDF 1572
Query: 582 -------LNSEIVLSAFDGSP--LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
L SE + AL ++K+C+ P ++ K V D +L +
Sbjct: 1573 TKKQGKKLQSEAGRDDKEAKQHIFQALQYMRKLCNSPAMVMK-PGTPVYDDTQKILQRQG 1631
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNL 692
++ + +H + D L + P H LIF Q ++ML++
Sbjct: 1632 TSIED--TIHAPKLTALKDLLVDCGIGGDDGDTNDPLYQPIKP--HRALIFCQMKEMLDM 1687
Query: 693 IQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKAD 749
+++ + + LR+DG+ +A+ R IVN F + LLT+ VGGLGL LT AD
Sbjct: 1688 VEKKVLKELLPSVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLTGAD 1747
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK + T
Sbjct: 1748 TVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKIDVASTVV 1807
Query: 810 EHKEQIRYFSQQDLRELLSL 829
+Q S D ++L L
Sbjct: 1808 --NQQNAGLSTMDTDQILDL 1825
>gi|367027820|ref|XP_003663194.1| hypothetical protein MYCTH_2304797 [Myceliophthora thermophila ATCC
42464]
gi|347010463|gb|AEO57949.1| hypothetical protein MYCTH_2304797 [Myceliophthora thermophila ATCC
42464]
Length = 1893
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 272/539 (50%), Gaps = 65/539 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1293 FQIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTICMVASDHHQRAEE 1352
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +LVV P TL HW +E+ + Y G + + ++ L
Sbjct: 1353 FAKTGAPEVRRLPSLVVCPPTLSGHWQQEIKTYAPFLSVTAYVGPPAERKA--MKDRLDQ 1410
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ + + W+Y++LDEGHLIKNP + ++ +
Sbjct: 1411 TDIVITSYDVCRNDIDVIEKYN------------WNYVVLDEGHLIKNPRAKITLAVKRL 1458
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1459 ISNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIANSRYSKASSKEQE 1518
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV DD L K + L+ Q +L+E F
Sbjct: 1519 AGALAIEALHKQVLPFLLRRLKEEVL--DD------LPPKILQNYYCDLSDLQIKLFEEF 1570
Query: 582 LNSE-IVLSAFDGSP--------LAALTILKKICDHPLLLTK---RAAEDVLDGM----D 625
E LS G AL ++K+C+ P L+ K R+ E+ +
Sbjct: 1571 TKREGRKLSEQAGRDDKEAKQHIFQALQYMRKLCNSPALVMKPGHRSYEETQKYLAKQNT 1630
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQ 685
S+ +P A L + D + E D + I + H LIF Q
Sbjct: 1631 SLEDPVHAPKLTALRDLLVDCGIGTEGGESSDPLYTPI------------KPHRALIFCQ 1678
Query: 686 TRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLG 742
++ML+++Q ++ ++LR+DG+ +A+ R IVN F + LLT+ VGGLG
Sbjct: 1679 MKEMLDMVQNTVLKTMLPTVQYLRLDGSVEANRRQDIVNKFNSDPSYDVLLLTTSVGGLG 1738
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
L LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1739 LNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILGLQRFK 1797
>gi|448516846|ref|XP_003867651.1| Mot1 protein [Candida orthopsilosis Co 90-125]
gi|380351990|emb|CCG22214.1| Mot1 protein [Candida orthopsilosis]
Length = 1954
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 190/575 (33%), Positives = 288/575 (50%), Gaps = 60/575 (10%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
++ LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q ++ H R
Sbjct: 1333 SFDLPVSIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIISSDHHIRAE 1392
Query: 353 KRA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
K A LV+ P +L HW +E+ K+ Y G + + L+ L
Sbjct: 1393 KYAETGAVEYRRLPSLVICPPSLTGHWEQEINQYAPFMKVLVYAGN--PSIRTPLRSQLP 1450
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
V++T+YD+ RN+ + L + +Y +LDEGH+IKN +++ +KS+ +
Sbjct: 1451 HVDVVVTSYDVSRNDVEYLSSLDY------------NYCVLDEGHIIKNANSKLSKSVKQ 1498
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
I + HR+I+SGTPIQNN+ ELW+LF+F P LG K F EK+ PI + +E+
Sbjct: 1499 IRAEHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQ 1558
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK +V + L K + L+ Q++LY+
Sbjct: 1559 EAGALALESLHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSELQKKLYKD 1610
Query: 581 FLNSEIVLSAFDGSP---------LAALTILKKICDHPLLLTKRA------AEDVLDGMD 625
F +E D S AL ++K+C+HP L+ E+ L +
Sbjct: 1611 FAKNEKESIKNDVSSAEKEGKTHVFQALQYMRKLCNHPALVVSPNHPKYVDVENFLASRN 1670
Query: 626 SML-NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
S L N E + + L + + + + K + L L+ +I E H LIF
Sbjct: 1671 SQLRNIEHSPKLQSLRTLLLECGIGTQDSDYGKSKQKKTNDALMPLEGVISE-HRALIFC 1729
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q + ML++++ + K ++R+DG+T +R IV F + + LLT++VGGL
Sbjct: 1730 QLKDMLDIVENDLLKKYLPSVTYMRLDGSTDPRNRQAIVRKFNDDPSIDVLLLTTKVGGL 1789
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+R+GQKK V VYRL+T T+EEKI Q FK
Sbjct: 1790 GLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRLITKDTLEEKIMGLQKFK 1849
Query: 802 GGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDV 836
+ T +Q D +LL L FDV
Sbjct: 1850 MNIASTIV--NQQNAGLQSMDTNQLLDL----FDV 1878
>gi|403352061|gb|EJY75536.1| Helicase [Oxytricha trifallax]
Length = 1177
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 169/509 (33%), Positives = 273/509 (53%), Gaps = 76/509 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGL--FHSRLIKRA-- 355
IG +L +Q EGL WL+ L GIL D+MGLGKT+Q +A + F ++ + +
Sbjct: 129 IGGILRDYQVEGLNWLYKLQQTKLNGILADEMGLGKTIQSIAIMALVESFKTQEQRESRK 188
Query: 356 ---LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDI 411
+V+ PK +L W KE+ S ++++++G+ + R+ + Q + Q + ++LTT++
Sbjct: 189 THHIVIVPKIVLGKWNKEIQEWVPSLRLKQFYGSN-EEREIQKQEMRQHQFDIMLTTFET 247
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
V L F +++ILDE IKN + ++ L + + HRI+++G
Sbjct: 248 VIREKGELSKYHF------------EFLILDEAQRIKNDESVLSQVLRKFKTQHRILLTG 295
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
TP+QNNLKELWAL NF P+L + FK EL +++ + A ++ + +++
Sbjct: 296 TPLQNNLKELWALLNFLMPKLFDSAEEFK---ELFMIKNEYEGAQEQ-------IIRQIH 345
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
++P+ LRRLK V L K E+ +++ L+ Q+QLY+ L I +
Sbjct: 346 RLLRPFMLRRLK--------VDVEKNLPTKKEIYLFIGLSKLQKQLYKNILTGNIDVVNG 397
Query: 592 DGSPLAALTI---LKKICDHPLLLTK-RAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
G + L + LKK+C+HP L K LDG H+ D
Sbjct: 398 VGDKIKLLNVLMQLKKVCNHPYLFDKVEPGPPFLDG-----------------EHLID-- 438
Query: 648 EKDDFQEQHDNISCKISFILSLL-DKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLR 706
+C +L LL KL+ +G +LIFSQ ++L+++ + + +GY++ R
Sbjct: 439 ------------NCMKFKVLDLLVPKLLNQGCKILIFSQMTRLLDILDDFLRFRGYQYCR 486
Query: 707 IDGTTKASDRVKIVNDFQEGD-VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
IDG T A+DR + +FQ+ D +F+L+++ GGLG+ L A+ VI+ D WNP D Q
Sbjct: 487 IDGQTSANDREIRIEEFQKADSTKQLFILSTRAGGLGINLHSANVVIIFDSDWNPQVDLQ 546
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKI 794
++DRA+RIGQK+DVVVYR +T G+VEEKI
Sbjct: 547 AIDRAHRIGQKRDVVVYRFVTEGSVEEKI 575
>gi|354543627|emb|CCE40348.1| hypothetical protein CPAR2_103860 [Candida parapsilosis]
Length = 1954
Score = 266 bits (680), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 284/572 (49%), Gaps = 60/572 (10%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA 355
LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q ++ H R K A
Sbjct: 1332 LPVSIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIISSDHHIRAEKYA 1391
Query: 356 ------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG 403
LV+ P +L HW +E+ K+ Y G + + L+ L
Sbjct: 1392 ETGTAEYRRLPSLVICPPSLTGHWEQEINQYAPFMKVLVYAGN--PSTRTPLRSQLPHAD 1449
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
V++T+YD+ RN+ + L + +Y +LDEGH+IKN +++ +KS+ +I +
Sbjct: 1450 VVVTSYDVSRNDVEYLSSLDY------------NYCVLDEGHIIKNANSKLSKSVKQIRA 1497
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
HR+I+SGTPIQNN+ ELW+LF+F P LG K F EK+ PI + +E+ G
Sbjct: 1498 EHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQEAG 1557
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
+ + L +++ P+ LRRLK +V + L K + L+ Q++LY F
Sbjct: 1558 ALALESLHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSDLQKKLYRDFAK 1609
Query: 584 SEIVLSAFDGSP---------LAALTILKKICDHPLLLTKR------AAEDVLDGMDSML 628
+E D S AL ++K+C+HP L+ E L S L
Sbjct: 1610 NEKESIKNDVSSTEKEGKTHVFQALQYMRKLCNHPALVVSPNHPKYDEVESFLASRHSQL 1669
Query: 629 -NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
N E + + L + + + + K + L L+ +I E H LIF Q +
Sbjct: 1670 RNIEHSPKLQSLRTLLLECGIGTQDSDYGKSSQKKSNDALMPLEGVISE-HRALIFCQLK 1728
Query: 688 KMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
ML++++ + K ++R+DG+T +R IV F + + LLT++VGGLGL
Sbjct: 1729 DMLDIVENDLLKKYLPSVTYMRLDGSTDPRNRQAIVRKFNDDPSIDVLLLTTKVGGLGLN 1788
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
LT AD VI V+ WNP +D Q++DRA+R+GQKK V VYRL+T T+EEKI Q FK +
Sbjct: 1789 LTGADTVIFVEHDWNPMSDLQAMDRAHRLGQKKVVNVYRLITKDTLEEKIMGLQKFKMNI 1848
Query: 805 FKTATEHKEQIRYFSQQDLRELLSLPKQGFDV 836
T +Q D +LL L FDV
Sbjct: 1849 ASTIV--NQQNAGLQSMDTNQLLDL----FDV 1874
>gi|321259505|ref|XP_003194473.1| helicase [Cryptococcus gattii WM276]
gi|317460944|gb|ADV22686.1| Helicase, putative [Cryptococcus gattii WM276]
Length = 1848
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 178/536 (33%), Positives = 268/536 (50%), Gaps = 62/536 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P ++ L +Q++G+ WL L GIL DDMGLGK++Q +A H R +
Sbjct: 1271 YQIPVEVKAELRQYQKDGVSWLAFLAKYQLHGILCDDMGLGKSLQSICIIASKHHERAER 1330
Query: 354 R------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+L++ P TL HW E+ + +Y G+ + + L+ L
Sbjct: 1331 HKATQSIDSAHLPSLIICPPTLTGHWYHEILKFTPHLRPVQYVGSAFE--RTTLRRSLSS 1388
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++++Y+ +R++ SF+ Y +LDEGH+IKN T+ A ++ +I
Sbjct: 1389 YDVVISSYESIRSDISEFSKFSFL------------YCVLDEGHIIKNTKTKLAAAVKQI 1436
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+++SGTPIQNN+ ELW+LF+F P LG+ + F EK+ PIL + A +E++
Sbjct: 1437 KAQHRLLLSGTPIQNNVLELWSLFDFLMPGFLGNERTFNEKFSKPILADREGKATPKERK 1496
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
+ + L +++ P+ LRRLK +V ++ L K + L+ Q+QLY+ F
Sbjct: 1497 AAANALEALHKQVLPFLLRRLKEDVLND--------LPPKIIQDYYCELSPVQQQLYDEF 1548
Query: 582 LNSEIVLSA-----------FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP 630
S+ A G +L L+K+C+HP L VLDG
Sbjct: 1549 SRSKAAEEAGMEIEKPASKEGQGHVFQSLQYLRKLCNHPAL--------VLDGEPQRFKE 1600
Query: 631 EDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE--GHNVLIFSQTRK 688
+ +H A K + Q C I DKL + H VLIF Q R
Sbjct: 1601 IQKKIGGGPGLHDLSHAPKMEALRQLLQ-DCGIGLP---PDKLADDVTTHRVLIFCQLRP 1656
Query: 689 MLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTL 745
ML++I++ + ++R+DG+T R IV F + LLT+ VGGLGL L
Sbjct: 1657 MLDIIEKDLFGTHMPTVSYMRLDGSTDPRKRHAIVQTFNADPRIDVLLLTTSVGGLGLNL 1716
Query: 746 TKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
T AD VI VD WNP D Q++DRA+R+GQ+K V VYRL+T GT+EEKI Q FK
Sbjct: 1717 TGADTVIFVDHDWNPMKDLQAMDRAHRLGQRKVVNVYRLITRGTLEEKIMGLQRFK 1772
>gi|425771331|gb|EKV09777.1| TBP associated factor (Mot1), putative [Penicillium digitatum PHI26]
Length = 2854
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 271/538 (50%), Gaps = 61/538 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L P+Q++G+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 2256 FEIPVAIKAELRPYQQDGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHMRAEE 2315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P +L HW +E+ Y G + LQ +L
Sbjct: 2316 FAKSQSTDSRKLPSLIVCPPSLSGHWQQEVKQYAPFLSCIAYVGP--PAERSRLQSLLAT 2373
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YD+ RN++ L +F +Y +LDEGHLIKNP + S+ ++
Sbjct: 2374 TDVIVTSYDVCRNDNDILCPINF------------NYCVLDEGHLIKNPKAKITSSVKKL 2421
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 2422 ASNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 2481
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + Q++L+E F
Sbjct: 2482 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKIIQNYYCDPSELQKKLFEDF 2533
Query: 582 LNSE------IVLSAFDGSP---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E V SA G AL ++++C+ P L+ K + N
Sbjct: 2534 SKKEQKELADKVGSADRGDKEHIFQALQYMRRLCNSPALVVKEGHKQY--------NEVQ 2585
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKL-----IPEGHNVLIFSQT 686
+ LA K + +I D++ D + C I + +L H L+F Q
Sbjct: 2586 SFLAAKRS-NIRDLSHAPKLNALKDLLVDCGIGLDHTAEGELDTGASYVSPHRALVFCQM 2644
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K ++LR+DG +A+ R IVN F + LLT+ VGGLGL
Sbjct: 2645 KEMLDIVQNDVLKKLLPSVQYLRLDGGVEATKRQDIVNRFNTDPSYDVLLLTTSVGGLGL 2704
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 2705 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 2762
>gi|449666322|ref|XP_002164775.2| PREDICTED: TATA-binding protein-associated factor 172-like [Hydra
magnipapillata]
Length = 1718
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 282/579 (48%), Gaps = 82/579 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLI 352
Y +P I L +Q++G+ WL L GIL DDMGLGKT+Q IC A F S +
Sbjct: 1124 YQIPIPINCELRKYQQDGVNWLAFLKKYNLHGILCDDMGLGKTLQSICIMAADHFDS--L 1181
Query: 353 KR-------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVL 399
K+ +LV+ P TL HW E+ + T + + LQ L
Sbjct: 1182 KKYKMSLKEDLKPLPSLVICPPTLTEHWCYEVEKFCQKEHLNPINYTGTPSERQRLQANL 1241
Query: 400 QDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLL 459
++ +++ +YDI+RN+ FI+ W+Y ILDEGH+IKN T +K +
Sbjct: 1242 KNYNLVIASYDIIRND-----AIFFIAQH-------WNYCILDEGHIIKNSKTMLSKKIK 1289
Query: 460 EIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDRE 519
+ + HR+I+SGTPIQNN+ ELW+LF+F P LG K F K+ PIL+ D + +E
Sbjct: 1290 LLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKEFTAKFGKPILQSKDVKSSSKE 1349
Query: 520 KRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYE 579
+ G+ + L ++ P+ LRRLK +V + L K + L+ Q +LYE
Sbjct: 1350 QEAGALAMETLHKQTLPFLLRRLKEDVLQD--------LPPKIIQDYYCELSPLQVKLYE 1401
Query: 580 AFLNSE---IVLSAFD------------GSPLAALTILKKICDHPLLLTKRAAEDVLDGM 624
F S+ + A D G AL L+K+C+HP L+ +
Sbjct: 1402 DFSQSQAKKTIDGAVDISSKSIEVKQEAGHIFQALQYLRKVCNHPSLVMTPS-------- 1453
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNIS-------CKISF--ILSLLDKLIP 675
+PE +++ L + + + +D Q ++ C I ++L D+L P
Sbjct: 1454 ----HPEYSSVCSYL---VENKSSLNDIQHSSKLLALKQLLLDCGIGVENNVNLTDELHP 1506
Query: 676 --EGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAP 730
H LIF Q + MLN+++ + + +LR+DG+ A+ R IV F
Sbjct: 1507 VVSQHRALIFFQLKSMLNIVENDLFKQHLPSITYLRLDGSVPANQRHNIVQMFNNDPSID 1566
Query: 731 IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTV 790
+ LLT+ VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+ T+
Sbjct: 1567 VLLLTTHVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLIARSTL 1626
Query: 791 EEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
EEKI Q FK + T Y D +LL L
Sbjct: 1627 EEKIMGLQKFKLNIANTVITRDNSSLY--SMDTSQLLDL 1663
>gi|290982366|ref|XP_002673901.1| predicted protein [Naegleria gruberi]
gi|284087488|gb|EFC41157.1| predicted protein [Naegleria gruberi]
Length = 873
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 289/550 (52%), Gaps = 47/550 (8%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQ-------GKGGILGDDMGLGKTMQICGFLA-----GLF 347
+G L PHQ EG+++++ C GKG +L D+MGLGKT+Q + G F
Sbjct: 246 LGENLRPHQVEGVKFMY--ECAMGLKDFVGKGCLLADEMGLGKTLQTITLIYTLLRRGPF 303
Query: 348 HSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG---- 403
S +IK+A+VV +L+ +W E KI+ T +Q + + K
Sbjct: 304 GSPIIKKAIVVTNSSLVKNWTSEFDKWVGEDKIKVLTVTTKTAKQSPSETLKIFKAGYHQ 363
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
VL+ +Y++ N + L+ D D +I DEGH +KN + + ++L +I +
Sbjct: 364 VLIISYNLCTNYVEELQ------------DCQCDILICDEGHKLKNANIKIFQTLKKIST 411
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
RI++SGTP+QN+L E + + +F P LLGD FK + PI + + +A ++K IG
Sbjct: 412 PRRIVLSGTPLQNDLNEFFTICDFINPGLLGDATSFKNLFTEPIKKSQEPNAKKQDKVIG 471
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
+KEL + + + LRR ++ L K E++++ +T Q LY+ F+
Sbjct: 472 ENRSKELNKIVSQFVLRRT--------NLLLRQHLPPKMEIVLFCGMTELQENLYKHFVL 523
Query: 584 SEIVLSAFDGS-----PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
S+ + +G+ LA + LKK+ HP ++ + + + D+ L + ++K
Sbjct: 524 SKALRGVINGTLDSNNALACIMHLKKLLAHPNMIYPQENNEEKEEEDNELFDDIWTQSKK 583
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
H +D +E H S K+ + +LL ++ G V+I S + +LN I++
Sbjct: 584 ---HFPSDYNPNDKKEYHSQYSGKLLVLDNLLREIREVGDRVVIVSNFKSILNEIEKLCK 640
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPA 757
+ Y R+DG+T++ R+ IVN F IFLL+S+ GG GL L A+R+I++DP
Sbjct: 641 IRDYPLSRLDGSTQSEKRMVIVNSFNSPKSNDFIFLLSSKAGGCGLNLIGANRLIMIDPD 700
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRY 817
WNPS D Q++ R +R GQKK V +YR++ CGT+EEKI+++QI K GL K+ + K
Sbjct: 701 WNPSNDEQAMARVWRDGQKKSVFIYRMIGCGTIEEKIFQRQIVKTGLSKSTLDEKSLKSQ 760
Query: 818 FSQQDLRELL 827
FS + L+EL
Sbjct: 761 FSSEMLKELF 770
>gi|402083788|gb|EJT78806.1| TATA-binding protein-associated factor MOT1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1894
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 275/541 (50%), Gaps = 69/541 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1293 FNIPVAIKAELRSYQQDGVNWLHFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRAEE 1352
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L+V P TL HW +E+ + Y G + + ++ L
Sbjct: 1353 FAKTGAPDVRRMPSLIVCPPTLSGHWQQEIKTYAPFLSVAAYVGPPAERKL--IRDRLDK 1410
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ + + + W+Y++LDEGHLIKNP + + ++ ++
Sbjct: 1411 ADIVITSYDVCRNDIEIIEKYN------------WNYVVLDEGHLIKNPKAKTSIAVKKL 1458
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1459 ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRYSKASSKEQE 1518
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1519 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKKLFEDF 1570
Query: 582 LNSEIVLSAFDGSP---------LAALTILKKICDHPLLLTK---RAAED---VLDGMDS 626
E A AL ++K+C+ P L+ K R ED +L +
Sbjct: 1571 QKRESSKIAEQAGREDKEAKQHIFQALQYMRKLCNSPALVMKPGHRLYEDTQRILAKQGT 1630
Query: 627 MLNPEDAALAEKLAM---HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIF 683
L ED A KL + D + + +D + I + H LIF
Sbjct: 1631 SL--EDHVHAPKLGALRDLLVDCGIGVEGTDSNDPLYQPI------------KPHRALIF 1676
Query: 684 SQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
Q ++ML+++Q ++ K FLR+DG+ +A+ R IVN F + LLT+ VGG
Sbjct: 1677 CQMKEMLDMVQNTVLKKLLPSVSFLRLDGSVEANKRQDIVNKFNSDPSFDVLLLTTSVGG 1736
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T T+EEKI Q F
Sbjct: 1737 LGLNLTGADTVIFVEHDWNPQRDLQAMDRAHRIGQKKVVNVYRLITRATLEEKILSLQRF 1796
Query: 801 K 801
K
Sbjct: 1797 K 1797
>gi|410931267|ref|XP_003979017.1| PREDICTED: TATA-binding protein-associated factor 172-like, partial
[Takifugu rubripes]
Length = 1732
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 264/553 (47%), Gaps = 71/553 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG + R
Sbjct: 1138 YKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQE 1197
Query: 352 ----------IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+ +LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1198 YSKAKATDCSLMPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERMRLQHQVKK 1257
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1258 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1305
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ R+I+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1306 AANFRVILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQE 1365
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L ++ P+ LRR+K +V + L K + L+ Q QLYE F
Sbjct: 1366 AGVLAMEALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCNLSPLQVQLYEDF 1417
Query: 582 LNSEIVLSA------------------FDGSPLAALTILKKICDHPLLLTKRAAEDVLDG 623
S S G AL L+K+C+HP L+
Sbjct: 1418 AKSRAKASVDESISTASAEEEEKPKLKATGHVFQALQYLRKLCNHPSLVL---------- 1467
Query: 624 MDSMLNPEDAALAEKLAMH------IADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
S +PE + E+LA I + ++ + + +
Sbjct: 1468 --SPQHPEFKRITEELAAQSSGLRDIQHAPKLSALKQLLLDCGLGGGGGSEGGTEAVVAQ 1525
Query: 678 HNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLL 734
H VLIF Q + ML++++ + +LR+DG+ A R IV+ F + LL
Sbjct: 1526 HRVLIFCQLKSMLDIVEHDLLKPKLPSITYLRLDGSVPAGLRHSIVSRFNNDPSIDVLLL 1585
Query: 735 TSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI 794
T+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL+T GT+EEKI
Sbjct: 1586 TTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKI 1645
Query: 795 YRKQIFKGGLFKT 807
Q FK + T
Sbjct: 1646 MGLQKFKMSIANT 1658
>gi|389629672|ref|XP_003712489.1| TATA-binding protein-associated factor MOT1 [Magnaporthe oryzae
70-15]
gi|351644821|gb|EHA52682.1| TATA-binding protein-associated factor MOT1 [Magnaporthe oryzae
70-15]
Length = 1893
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 180/537 (33%), Positives = 269/537 (50%), Gaps = 61/537 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1292 FNIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRAEE 1351
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ + Y G + + + + L
Sbjct: 1352 FAKTGAPDVRKLPSLIVCPPTLSGHWQQEIKTYAPFLSVTAYVGPPTERKVH--RDSLDK 1409
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ + D W+Y++LDEGHLIKNP + + ++ +
Sbjct: 1410 ADIVITSYDVCRNDIDVI------------DKYNWNYVVLDEGHLIKNPKAKTSIAVKRL 1457
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1458 MSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKASSKEQE 1517
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1518 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKKLFEDF 1569
Query: 582 LNSE---IVLSA------FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E I A AL ++K+C+ P L+ K + D +L +
Sbjct: 1570 TKKESKKITEQAGREDKEAKQHIFQALQYMRKLCNSPALVMK-PGHKLYDDTQRILAKQG 1628
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILS-----LLDKLIPEGHNVLIFSQTR 687
+L + +H + D + C I + L + P H LIF Q +
Sbjct: 1629 TSLED--PVHAPKLTALRDLL-----VDCGIGVEGTDSNDPLYQPIKP--HRALIFCQMK 1679
Query: 688 KMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
+ML+++Q ++ K FLR+DG +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1680 EMLDMVQNTVLKKLLPSVSFLRLDGGVEANKRQDIVNKFNSDPSFDVLLLTTSVGGLGLN 1739
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T T+EEKI Q FK
Sbjct: 1740 LTGADTVIFVEHDWNPQRDLQAMDRAHRIGQKKVVNVYRLITRATLEEKILSLQRFK 1796
>gi|297723595|ref|NP_001174161.1| Os04g0692750 [Oryza sativa Japonica Group]
gi|255675922|dbj|BAH92889.1| Os04g0692750, partial [Oryza sativa Japonica Group]
Length = 204
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/251 (53%), Positives = 163/251 (64%), Gaps = 50/251 (19%)
Query: 327 LGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGT 386
LGDDMGLGKTMQ+ FLAGLFHSRLIKR LVVAPKTLL+HW KEL+ V L KIR+Y G
Sbjct: 1 LGDDMGLGKTMQVSAFLAGLFHSRLIKRVLVVAPKTLLTHWTKELSVVSLKDKIRDYSGP 60
Query: 387 CVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
R YEL+Y ++ G+LLTTYDIVRNN K ++G +F +D +++ +W+Y+ILDEGH+
Sbjct: 61 NANARNYELKYAFKEGGILLTTYDIVRNNFKMIKG-NFTNDFDDEEETLWNYVILDEGHI 119
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
IKNP TQRA+SL EIP AHRI+ISGTPIQNNLKE
Sbjct: 120 IKNPKTQRAQSLFEIPCAHRIVISGTPIQNNLKE-------------------------- 153
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
LRERI+PYFLRR+KNEVF + L+KKNE+I+
Sbjct: 154 -----------------------LRERIKPYFLRRMKNEVFLDSGTGEDKKLAKKNELII 190
Query: 567 WLRLTSCQRQL 577
WL+LTSCQ Q+
Sbjct: 191 WLKLTSCQVQI 201
>gi|167392422|ref|XP_001740146.1| chromodomain helicase DNA binding protein [Entamoeba dispar SAW760]
gi|165895824|gb|EDR23413.1| chromodomain helicase DNA binding protein, putative [Entamoeba dispar
SAW760]
Length = 1623
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 185/563 (32%), Positives = 283/563 (50%), Gaps = 94/563 (16%)
Query: 270 LDDYSDDSVLEDEGSITLSGPRSTYML---PGKIGNMLFPHQREGLRWLWSLHCQGKGGI 326
LD+Y + D +I P + + P + N L +Q EGL WL C+GKG I
Sbjct: 612 LDEYKKFHIPPDPSTIEPPLPDRLWQVQEHPYRHDNTLRSYQMEGLNWLVFNWCRGKGCI 671
Query: 327 LGDDMGLGKTMQICGFLAGL-FHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFG 385
L D+MGLGKT+Q+ F L +L LVV P + L HW +E+ + Y G
Sbjct: 672 LADEMGLGKTVQVVAFFEHLRSFQKLPGPFLVVTPLSTLEHWRREINE-WTDMNVVVYLG 730
Query: 386 TCVKTRQ----YELQYVLQDKG---------VLLTTYDIVRNNSKSLRGSSFISDEAGDD 432
T + RQ YE Y+ +D+ L+TTY+++ +SD
Sbjct: 731 TK-ENRQLIQHYEWFYLNKDEKEISKQIKFHALITTYEMI------------MSDYEILS 777
Query: 433 DAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPEL 492
W ++DE +KN S++ K+L EIPS H+I+++GTPIQNN+ ELW L NF PE
Sbjct: 778 QIRWQVTVVDEAQRLKNKSSKLNKTLTEIPSYHKILLTGTPIQNNIDELWTLLNFINPEN 837
Query: 493 LGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDV 552
+ F EK+ G+ K A K L+ IQPY LRR+K V
Sbjct: 838 FPSLENFHEKF------GDAKTA---------DGVKALQTEIQPYLLRRVKGNV------ 876
Query: 553 TSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFDGSPLAAL----TILKKIC 606
++ K E+++ + LT Q++ Y A N E + GS + L L+K+C
Sbjct: 877 --EKSIPPKEEILIEVELTLVQKKYYRALYDKNREFLNKGCVGSNVPHLQNLMIQLRKVC 934
Query: 607 DHPLLLTKRAAEDVLDGMDSMLNPEDA-ALAEKLAMHIADVAEKDDFQEQHDNISCKISF 665
+HP L+ +++ NPED + A++L K S
Sbjct: 935 NHPFLIPGVEEKEIA-------NPEDPESYAQEL---------------------IKSSG 966
Query: 666 ILSLLDKLIP----EGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVN 721
+ LLDKL+P +GH VLIFSQ + +L+++++ + K Y + R+DG+ +++DR ++
Sbjct: 967 KMVLLDKLLPKLNTDGHKVLIFSQLKGVLDILEKYLSYKKYTYERLDGSVRSNDRQNAID 1026
Query: 722 DFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 781
F +G+ +FLL ++ GG+G+ L++AD VI+ D WNP D Q+ R +RIGQKK+V V
Sbjct: 1027 RFMKGERF-VFLLCTRAGGIGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQKKEVKV 1085
Query: 782 YRLMTCGTVEEKIYRKQIFKGGL 804
YRL++ T E ++ + K GL
Sbjct: 1086 YRLVSKNTYERYMFERASMKLGL 1108
>gi|156847192|ref|XP_001646481.1| hypothetical protein Kpol_1048p54 [Vanderwaltozyma polyspora DSM
70294]
gi|156117158|gb|EDO18623.1| hypothetical protein Kpol_1048p54 [Vanderwaltozyma polyspora DSM
70294]
Length = 1902
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 291/589 (49%), Gaps = 75/589 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--- 350
+ LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A + R
Sbjct: 1302 FKLPVAIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRQED 1361
Query: 351 ------LIKR---ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+ R +L++ P +L HW E + Y G TRQ L+ L D
Sbjct: 1362 FKETKSVETRPLPSLIICPPSLTGHWENEFEVYSPFLNVVVYAGGP-STRQ-SLKERLAD 1419
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ + + +Y +LDEGH+IKN ++ AK++ I
Sbjct: 1420 ADIIVTSYDVARNDLSVITKYDY------------NYCVLDEGHIIKNSQSKLAKAVKSI 1467
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + + +E+
Sbjct: 1468 AANHRLILTGTPIQNNVVELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKSSSKEQE 1527
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK +V + L K + L+ Q+QLY+ F
Sbjct: 1528 QGTLALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSDLQKQLYKDF 1579
Query: 582 LNSEIVLSAFDGSPLA----------ALTILKKICDHP-LLLTKRAAEDVLDGMDSMLNP 630
N + + D A AL ++K+C+HP L+L++ + L +D L
Sbjct: 1580 ANKQKNVVEKDIQNTADVENKQHIFQALQYMRKLCNHPSLILSENHPQ--LKQVDEYLKQ 1637
Query: 631 -----EDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-----HNV 680
D A KL + E ++ D S D+L+P H
Sbjct: 1638 TGLGLHDIVNAPKLGALRNLLFECGIGEDDMDKKST---------DQLVPSNTVISQHRA 1688
Query: 681 LIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
LIF Q + ML+L++ + K ++R+DG+ DR K+V F E LLT++
Sbjct: 1689 LIFCQLKDMLDLVENDLFKKYMPSVTYMRLDGSVDPRDRQKVVRKFNEDPSIDCLLLTTK 1748
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLGL LT AD VI ++ WNP D Q++DRA+R+GQKK V VYR++T GT+EEKI
Sbjct: 1749 VGGLGLNLTGADTVIFIEHDWNPMNDLQAMDRAHRLGQKKVVNVYRIITKGTLEEKIMGL 1808
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
Q FK + T +Q + D +LL L FD + Q EE
Sbjct: 1809 QKFKMNIASTVV--NQQNNGLASMDTHQLLDL----FDTNNVPNQDKEE 1851
>gi|440475949|gb|ELQ44595.1| TATA-binding protein-associated factor MOT1 [Magnaporthe oryzae Y34]
gi|440487794|gb|ELQ67569.1| TATA-binding protein-associated factor MOT1 [Magnaporthe oryzae P131]
Length = 1963
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/537 (33%), Positives = 269/537 (50%), Gaps = 61/537 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R +
Sbjct: 1362 FNIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRAEE 1421
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P TL HW +E+ + Y G + + + + L
Sbjct: 1422 FAKTGAPDVRKLPSLIVCPPTLSGHWQQEIKTYAPFLSVTAYVGPPTERKVH--RDSLDK 1479
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ + D W+Y++LDEGHLIKNP + + ++ +
Sbjct: 1480 ADIVITSYDVCRNDIDVI------------DKYNWNYVVLDEGHLIKNPKAKTSIAVKRL 1527
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I++GTPIQNN+ ELW+LF+F P LG K F +++ PI A +E+
Sbjct: 1528 MSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKASSKEQE 1587
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L+E F
Sbjct: 1588 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKKLFEDF 1639
Query: 582 LNSE---IVLSA------FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E I A AL ++K+C+ P L+ K + D +L +
Sbjct: 1640 TKKESKKITEQAGREDKEAKQHIFQALQYMRKLCNSPALVMK-PGHKLYDDTQRILAKQG 1698
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILS-----LLDKLIPEGHNVLIFSQTR 687
+L + + H + D + C I + L + P H LIF Q +
Sbjct: 1699 TSLEDPV--HAPKLTALRDLL-----VDCGIGVEGTDSNDPLYQPIKP--HRALIFCQMK 1749
Query: 688 KMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
+ML+++Q ++ K FLR+DG +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1750 EMLDMVQNTVLKKLLPSVSFLRLDGGVEANKRQDIVNKFNSDPSFDVLLLTTSVGGLGLN 1809
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T T+EEKI Q FK
Sbjct: 1810 LTGADTVIFVEHDWNPQRDLQAMDRAHRIGQKKVVNVYRLITRATLEEKILSLQRFK 1866
>gi|401623255|gb|EJS41360.1| mot1p [Saccharomyces arboricola H-6]
Length = 1863
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 192/597 (32%), Positives = 293/597 (49%), Gaps = 78/597 (13%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-------- 345
+ LP I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A
Sbjct: 1258 FKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKED 1317
Query: 346 -----LFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
SR + +L+V P +L HW E K+ Y G T + L+ L+
Sbjct: 1318 YEKTQSVESRPLP-SLIVCPPSLTGHWENEFDQYAPFLKVVVYAGG--PTVRLGLRPQLE 1374
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++T+YD+ RN+ L + + +Y ILDEGH+IKN ++ AK++ E
Sbjct: 1375 GSDIIVTSYDVARNDLAVLNKTEY------------NYCILDEGHIIKNSQSKLAKAVKE 1422
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
I + HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1423 ITANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQ 1482
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G + L +++ P+ LRRLK +V + L K + L Q+QLY
Sbjct: 1483 EAGVLALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELGDLQKQLYMD 1534
Query: 581 FLNSE--IVLSAFDGSPLA--------ALTILKKICDHPLLLTKRAAEDV---------- 620
F + +V + ++ AL ++K+C+HP L+ +
Sbjct: 1535 FAKKQKNVVEKDIENPEVSDGKQHIFQALQYMRKLCNHPALVLSANHPQLGQVQEYLKQT 1594
Query: 621 -LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
LD D + P+ AL + + + E+D ++ + S I ++S H
Sbjct: 1595 GLDLHDIINAPKLNAL--RTLLFECGIGEEDMDKKACQDQSFPIQNVIS--------QHR 1644
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML++++ + K ++R+DG+ DR K+V F E LLT+
Sbjct: 1645 ALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSVDPRDRQKVVRKFNEDPSIDCLLLTT 1704
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI
Sbjct: 1705 KVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMG 1764
Query: 797 KQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE--HGDQH 851
Q FK + T +Q + D +LL L FD + Q +EE + D H
Sbjct: 1765 LQKFKMNIASTVV--NQQNSGLASMDTHQLLDL----FDPNNVTSQENEEKNNSDTH 1815
>gi|302307844|ref|NP_984605.2| AEL256Cp [Ashbya gossypii ATCC 10895]
gi|299789196|gb|AAS52429.2| AEL256Cp [Ashbya gossypii ATCC 10895]
gi|374107821|gb|AEY96728.1| FAEL256Cp [Ashbya gossypii FDAG1]
Length = 1866
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 194/603 (32%), Positives = 294/603 (48%), Gaps = 100/603 (16%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-------- 345
+ LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A
Sbjct: 1269 FSLPVAIKATLRKYQQEGINWLAFLNHYHLHGILCDDMGLGKTLQTICIIASDQYLRQED 1328
Query: 346 -----LFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
+R + +L+V P +L HW +E + Y G + +Y L+ L
Sbjct: 1329 YKTTKSVETRPLP-SLIVCPPSLTGHWEQEFEQYAPFLTVLVYAGG--PSTRYPLRGKLG 1385
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI----WDYMILDEGHLIKNPSTQRAK 456
D +++T+YD+ RN D D I ++Y +LDEGH+IKN ++ AK
Sbjct: 1386 DADIVVTSYDVARN----------------DIDIISKHDYNYCVLDEGHIIKNSQSKLAK 1429
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
++ I + HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI +
Sbjct: 1430 AVKSIRANHRLILTGTPIQNNVVELWSLFDFLMPGFLGSEKAFQERFAKPIAASRNSKTS 1489
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+E+ G+ + L +++ P+ LRRLK +V + L K + L+ QRQ
Sbjct: 1490 SKEQEAGALALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSDLQRQ 1541
Query: 577 LYEAFLNSE--IVLSAFDGSP--------LAALTILKKICDHP-LLLTK-----RAAEDV 620
LY+ F + IV + + AL ++K+C+HP L+L+K +D
Sbjct: 1542 LYKDFAKKQKNIVERDIENTMELESKNHIFQALQYMRKLCNHPSLVLSKDHPQYNQVQDY 1601
Query: 621 LD--GMDSMLNPEDAALAEKL----------AMHIADVAEKDDFQEQHDNISCKISFILS 668
L GMD D A A KL + + DV + +N+ +
Sbjct: 1602 LSQTGMDI----HDIAHAPKLGALRNLLLECGIGVQDVDQNSISLPSSENVISQ------ 1651
Query: 669 LLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQE 725
H LIF Q + ML++I+ + K ++R+DG+ ++ DR K+V F E
Sbjct: 1652 ---------HRALIFCQLKDMLDMIENDLFKKYLPSVTYMRLDGSVESRDRQKVVRKFNE 1702
Query: 726 GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLM 785
LLT++VGGLGL LT AD VI ++ WNP D Q++DRA+R+GQKK V VYR++
Sbjct: 1703 DPSIDCLLLTTKVGGLGLNLTGADTVIFIEHDWNPMNDLQAMDRAHRLGQKKVVNVYRII 1762
Query: 786 TCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHE 845
T G++EEKI Q FK + T +Q + D +LL L FD + Q+ E
Sbjct: 1763 TKGSLEEKIMGLQKFKMNIASTVV--NQQNAGLASMDTHQLLDL----FDTDNSLAQVKE 1816
Query: 846 EHG 848
E
Sbjct: 1817 EKA 1819
>gi|407033925|gb|EKE37010.1| SNF2 family protein [Entamoeba nuttalli P19]
Length = 1527
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 267/523 (51%), Gaps = 54/523 (10%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVA 359
I L P+Q +G+ WL LH GIL DDMGLGKT+Q L + H +L+V
Sbjct: 979 INGKLRPYQLDGISWLLFLHKYCINGILCDDMGLGKTLQTLCLLVTV-HKEAEYPSLIVC 1037
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
P TL HW E+ + ++ T ++ + L+ K +L+ +Y++VR++ +
Sbjct: 1038 PPTLTGHWKHEIEQFISQSDLKGVLYTGSVKERFVVLNSLRKKDILIASYEMVRHDLEQF 1097
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
+ F Y +LDEGH+IKNP T+ +++ +I S HR+I++GTPIQNN+
Sbjct: 1098 KTKRF------------TYCVLDEGHIIKNPKTKLTQAVKQIISLHRLILTGTPIQNNVL 1145
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
ELW+LF+F P LG K F E+Y PIL D + + ++R G V ++L ++ P+ L
Sbjct: 1146 ELWSLFDFLMPGFLGTEKEFSERYSKPILAAKDAASPEDQER-GVIVMEKLHRQVLPFIL 1204
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS----EIVLSAFD--- 592
RRLK V + L K + ++ QR LY+ F ++ EIV D
Sbjct: 1205 RRLKESVLQD--------LPPKIIQDYYCDMSPVQRMLYQEFESTNDMDEIVQQKSDKKQ 1256
Query: 593 -GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
L +++C HP+L VLD M DA L ++ I D+
Sbjct: 1257 KNHIFQILNYFRRLCVHPML--------VLDDQHPMKQKVDAYLKQE-GKTIDDITNSPK 1307
Query: 652 FQEQHDNIS-CKISFILSLLDKLIPEG-HNVLIFSQTRKMLNLIQESIGSKGYKFL---R 706
+ + C I +G H VLIF+Q L LI++ + +K + ++ R
Sbjct: 1308 LMALAELLEMCNIG----------KDGEHRVLIFAQMNITLELIEKQLFAKQFPYISYYR 1357
Query: 707 IDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
+DG+ + R +IV+ F+ + LLT++VGGLGL LT AD VI ++ WNP+ D Q+
Sbjct: 1358 LDGSVPQNKRTEIVDKFKNDPTIDVLLLTTRVGGLGLNLTAADIVIFMEHDWNPTKDLQA 1417
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
+DRA+R+GQ K V VYRL+ T+EE+I Q FK + T
Sbjct: 1418 MDRAHRLGQNKVVNVYRLIVRQTLEERIMNLQQFKTKIANTVV 1460
>gi|448089325|ref|XP_004196776.1| Piso0_004001 [Millerozyma farinosa CBS 7064]
gi|448093584|ref|XP_004197807.1| Piso0_004001 [Millerozyma farinosa CBS 7064]
gi|359378198|emb|CCE84457.1| Piso0_004001 [Millerozyma farinosa CBS 7064]
gi|359379229|emb|CCE83426.1| Piso0_004001 [Millerozyma farinosa CBS 7064]
Length = 1924
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 185/571 (32%), Positives = 280/571 (49%), Gaps = 60/571 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LP I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A + R K
Sbjct: 1315 FELPVSIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDHYMREEK 1374
Query: 354 R------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+L+V P +L HW +E + Y G+ + ++ L+ +
Sbjct: 1375 HKETKSEDSRRIPSLIVCPPSLTGHWEQEFNQYAPFLTVSVYAGS--PSLRFSLRPEVSR 1432
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ L +F +Y +LDEGH+IKN S++ KS+ +
Sbjct: 1433 SDIVVTSYDVCRNDIDFLEEFNF------------NYCVLDEGHIIKNSSSKLTKSVKRL 1480
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+++SGTPIQNN+ ELW+LF+F P LG K F EK+ PI +E+
Sbjct: 1481 RSEHRLVLSGTPIQNNVLELWSLFDFLMPGFLGTEKLFNEKFAKPIAASRSSKTSSKEQE 1540
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK +V + L K + L+ Q+QLY+ F
Sbjct: 1541 AGALALESLHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSDLQKQLYKDF 1592
Query: 582 LNSEIVLSAFDGSPLA-------------ALTILKKICDHPLLLTK------RAAEDVLD 622
+ + D +A AL ++K+C+HP L+ + L
Sbjct: 1593 AEKQKSVITEDIQNIAEPEEKGSKTHVFQALQYMRKLCNHPALVLSPDHPKFKDISSFLK 1652
Query: 623 GMDSML-NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVL 681
G +S L N E + L + + D E K + + +I E H L
Sbjct: 1653 GRNSDLRNIEHSPKLLSLKSLLLECGIGSDDSEYLAKTKMKPKQQVISSEGVISE-HRAL 1711
Query: 682 IFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
IF Q + ML++++ + K + R+DG+T +R IV F E + LLT++V
Sbjct: 1712 IFCQLKDMLDIVENDLLKKYLPSVTYTRLDGSTDPRERQSIVRKFNEDPSIDVLLLTTKV 1771
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T T+EEKI Q
Sbjct: 1772 GGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRLITKNTLEEKIMGLQ 1831
Query: 799 IFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
FK + T +Q + D ++LL L
Sbjct: 1832 KFKMNIASTIV--NQQNSGLASMDTKQLLDL 1860
>gi|390598661|gb|EIN08059.1| SNF2 chromatin remodeling protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1935
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 273/543 (50%), Gaps = 63/543 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y LP I L +Q+EG+ WL L GIL DDMGLGKT+Q LA + R K
Sbjct: 1338 YKLPVSIKAELRHYQQEGVNWLAFLAKYQLHGILCDDMGLGKTLQSICILASKHYER-AK 1396
Query: 354 R-------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
R +L+V P TL HW E+ + K Y G + +L L+
Sbjct: 1397 RYEETQSPDAVHLPSLIVCPPTLTGHWYYEIMKYAENLKPVTYTGN--SRERGKLLGKLK 1454
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
V++T+Y++VRN D A + W Y ILDEGH+IKN T+ K++
Sbjct: 1455 KYDVVITSYEVVRN------------DVANLEQIDWHYCILDEGHVIKNAKTKLTKAVKC 1502
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ + HR+I+SGTPIQNN+ ELW+LF+F P LG + F E++ PIL+ D + +
Sbjct: 1503 MRAQHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEQSFNERFSKPILQNRDGKS--KNG 1560
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
+ + L +++ P+ LRRLK +V H+ L K + L+ Q+QLY+
Sbjct: 1561 EAAALALEALHKQVLPFLLRRLKEDVLHD--------LPPKIIQDYYCELSDLQKQLYDE 1612
Query: 581 FLNS------EIVLSAFDGS-------PLAALTILKKICDHPLLLTKR---AAEDVLDGM 624
F S E+V+ + +L L+K+C+HP LL K A L+ +
Sbjct: 1613 FSQSQARSQAEVVVHSGPSEGGKESHHVFQSLQYLRKLCNHPALLLKNDPAALSTALEKV 1672
Query: 625 DSMLNPE---DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVL 681
+ +P D A KL + + + N K +++S H L
Sbjct: 1673 GAKKDPSALSDIQHAPKL-LALKQLLSDCGIGTASGNADEKADYLVSETGAF--SQHRAL 1729
Query: 682 IFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
IF Q ++ML++I+ + + ++R+DG+T A+ R IV F LLT+ V
Sbjct: 1730 IFCQMKQMLDIIENDLFKQFMPSVTYMRLDGSTDANKRHAIVQTFNSDPSIDCLLLTTHV 1789
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLGLTLT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q
Sbjct: 1790 GGLGLTLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITKGTLEEKIMGLQ 1849
Query: 799 IFK 801
FK
Sbjct: 1850 RFK 1852
>gi|320038286|gb|EFW20222.1| helicase SWR1 [Coccidioides posadasii str. Silveira]
Length = 1905
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 278/566 (49%), Gaps = 63/566 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1304 FEIPVGIKAELRSYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1363
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P ++ HW +E+ Y G + ++ + L +
Sbjct: 1364 FSRTQAPEVRRLPSLIICPPSVSGHWQQEIQQYAPFLTCVSYMGPPAERARHRPR--LTE 1421
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ + W+Y +LDEGHLIKNP + ++ I
Sbjct: 1422 VDIVITSYDICRNDNDIFAPMA------------WNYCVLDEGHLIKNPRAKITLAVKRI 1469
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1470 QSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1529
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + QR+L+E F
Sbjct: 1530 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDPSELQRKLFEDF 1581
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L+ GS AL ++++C+ P L+ K + + N
Sbjct: 1582 TKKEQKELAKKLGSTEKEAKEHIFQALQYMRRLCNSPALVVKEGHRQYQEVQRYLANKNS 1641
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKLIPEG-----HNVLIFSQT 686
+I D++ D I C I S +L H LIF Q
Sbjct: 1642 ---------NIRDISHAPKLTALRDLLIDCGIGVDPSAEGELNTAASYVSPHRALIFCQM 1692
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K ++LR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1693 KEMLDIVQNDVLKKLLPSIQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGL 1752
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1753 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1812
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D +LL L
Sbjct: 1813 VASTVV--NQQNAGLSTMDTDQLLDL 1836
>gi|303316872|ref|XP_003068438.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108119|gb|EER26293.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1905
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 278/566 (49%), Gaps = 63/566 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A H R
Sbjct: 1304 FEIPVGIKAELRSYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCIVASDHHLRAEE 1363
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P ++ HW +E+ Y G + ++ + L +
Sbjct: 1364 FSRTQAPEVRRLPSLIICPPSVSGHWQQEIQQYAPFLTCVSYMGPPAERARHRPR--LTE 1421
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YDI RN++ + W+Y +LDEGHLIKNP + ++ I
Sbjct: 1422 VDIVITSYDICRNDNDIFAPMA------------WNYCVLDEGHLIKNPRAKITLAVKRI 1469
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI + +E+
Sbjct: 1470 QSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSSKEQE 1529
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + + QR+L+E F
Sbjct: 1530 AGALAIEALHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDPSELQRKLFEDF 1581
Query: 582 LNSEIV-LSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
E L+ GS AL ++++C+ P L+ K + + N
Sbjct: 1582 TKKEQKELAKKLGSTEKEAKEHIFQALQYMRRLCNSPALVVKEGHRQYQEVQRYLANKNS 1641
Query: 633 AALAEKLAMHIADVAEKDDFQEQHD-NISCKISFILSLLDKLIPEG-----HNVLIFSQT 686
+I D++ D I C I S +L H LIF Q
Sbjct: 1642 ---------NIRDISHAPKLTALRDLLIDCGIGVDPSAEGELNTAASYVSPHRALIFCQM 1692
Query: 687 RKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
++ML+++Q + K ++LR+DG+ +A+ R IVN F + LLT+ VGGLGL
Sbjct: 1693 KEMLDIVQNDVLKKLLPSIQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGL 1752
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1753 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1812
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q S D +LL L
Sbjct: 1813 VASTVV--NQQNAGLSTMDTDQLLDL 1836
>gi|67481787|ref|XP_656243.1| SNF2 family protein [Entamoeba histolytica HM-1:IMSS]
gi|56473432|gb|EAL50858.1| SNF2 family protein [Entamoeba histolytica HM-1:IMSS]
Length = 1527
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 267/523 (51%), Gaps = 54/523 (10%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVA 359
I L P+Q +G+ WL LH GIL DDMGLGKT+Q L + H +L+V
Sbjct: 979 INGKLRPYQLDGISWLLFLHKYCINGILCDDMGLGKTLQTLCLLVTV-HKEAEYPSLIVC 1037
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
P TL HW E+ + ++ T ++ + L+ K +L+ +Y++VR++ +
Sbjct: 1038 PPTLTGHWKHEIEQFISQSDLKGVLYTGSVKERFVVLNSLRKKDILIASYEMVRHDLEQF 1097
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
+ F Y +LDEGH+IKNP T+ +++ +I S HR+I++GTPIQNN+
Sbjct: 1098 KTKRF------------TYCVLDEGHIIKNPKTKLTQAVKQIISLHRLILTGTPIQNNVL 1145
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
ELW+LF+F P LG K F E+Y PIL D + + ++R G V ++L ++ P+ L
Sbjct: 1146 ELWSLFDFLMPGFLGTEKEFSERYSKPILAAKDAASPEDQER-GVIVMEKLHRQVLPFIL 1204
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS----EIVLSAFD--- 592
RRLK V + L K + ++ QR LY+ F ++ EIV D
Sbjct: 1205 RRLKESVLQD--------LPPKIIQDYYCDMSPVQRMLYQEFESTNDMDEIVQQKSDKKQ 1256
Query: 593 -GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
L +++C HP+L VLD M DA L ++ I D+
Sbjct: 1257 KNHIFQILNYFRRLCVHPML--------VLDDQHPMKQKVDAYLKQE-GKTIDDITNSPK 1307
Query: 652 FQEQHDNIS-CKISFILSLLDKLIPEG-HNVLIFSQTRKMLNLIQESIGSKGYKFL---R 706
+ + C I +G H VLIF+Q L LI++ + +K + ++ R
Sbjct: 1308 LMALAELLEMCNIG----------KDGEHRVLIFAQMNITLELIEKQLFAKQFPYISYYR 1357
Query: 707 IDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
+DG+ + R +IV+ F+ + LLT++VGGLGL LT AD VI ++ WNP+ D Q+
Sbjct: 1358 LDGSVPQNKRTEIVDKFKNDPTIDVLLLTTRVGGLGLNLTAADIVIFMEHDWNPTKDLQA 1417
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
+DRA+R+GQ K V VYRL+ T+EE+I Q FK + T
Sbjct: 1418 MDRAHRLGQNKVVNVYRLIVRQTLEERIMNLQQFKTKIANTVV 1460
>gi|427796961|gb|JAA63932.1| Putative tata-binding protein-associated factor, partial
[Rhipicephalus pulchellus]
Length = 1962
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 188/578 (32%), Positives = 280/578 (48%), Gaps = 80/578 (13%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--L 351
Y L I L +Q+EG+ WL L+ GIL DDMGLGKT+Q LA H R L
Sbjct: 1369 YELCVPINAQLRSYQQEGVNWLAFLNKYSLHGILCDDMGLGKTLQSICILASDHHKREQL 1428
Query: 352 IKR----------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
K +LVV P TL HW+ E+ S ++ T + LQ
Sbjct: 1429 YKETQRADAKPLPSLVVCPPTLTGHWVYEVEKFVSSKYLQPLHYTGPPMERARLQEKAHK 1488
Query: 402 KGVLLTTYDIVRNNS---KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL 458
+++ +YDIVRN+ ++R W+Y ILDEGH+IKN T+ A++L
Sbjct: 1489 HNLVVASYDIVRNDIDFFATIR---------------WNYCILDEGHIIKNGRTKLARAL 1533
Query: 459 LEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDR 518
++ + HR+I++GTPIQN + +LW+LF+F P LG + F +++ PIL+ D + R
Sbjct: 1534 KQLQANHRLILTGTPIQNQVLDLWSLFDFLMPGFLGTERQFAQRFSRPILQSRDAKSSSR 1593
Query: 519 EKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY 578
E+ G + L ++ P+ LRR+K++V + L K + L+ Q QLY
Sbjct: 1594 EQEAGVLAMESLHRQVLPFLLRRVKDDVLQD--------LPPKIIQDYYCELSPLQVQLY 1645
Query: 579 EAFLNS--------EIVLSAFDGS--------PLAALTILKKICDHP-LLLTKRAAE--D 619
E F S + ++ D S AL L+K+C+HP L+L + E
Sbjct: 1646 EDFARSRAKKSVDESVAATSEDLSVNQHATAHVFQALQYLRKVCNHPKLVLNPQHPEYNR 1705
Query: 620 VLDGM----DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIP 675
++ G+ S+ + AA L + D Q + +++
Sbjct: 1706 IMAGLQQSESSLSDINHAAKLRSLRQLLLDCGIGTAAQPEQESVV--------------- 1750
Query: 676 EGHNVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIF 732
H LIF Q + ML+++++ + +LR+DG+ R +V F +
Sbjct: 1751 HAHRALIFCQLKGMLDIVEKDLLMTHMSSVSYLRLDGSVPPGQRQALVQRFNADPSIDVL 1810
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LLT+QVGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EE
Sbjct: 1811 LLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRGTLEE 1870
Query: 793 KIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSL 829
KI Q FK + T T+ + L +L +L
Sbjct: 1871 KIMGLQKFKLTIANTVITQENSNLNTMGTDQLLDLFTL 1908
>gi|83649604|ref|YP_438039.1| SNF2 family DNA/RNA helicase [Hahella chejuensis KCTC 2396]
gi|83637647|gb|ABC33614.1| Superfamily II DNA/RNA helicase, SNF2 family [Hahella chejuensis KCTC
2396]
Length = 1106
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 186/543 (34%), Positives = 271/543 (49%), Gaps = 86/543 (15%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA-GLFHSRLIKRA 355
P L +Q+EGL WL L GGIL DDMGLGKT+Q L+ R+ +
Sbjct: 636 PDWFNATLRDYQQEGLNWLGFLREIEMGGILADDMGLGKTIQTLALLSVEKAQGRMDRPC 695
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
L+VAP +L+S+W KE K+ G+ + ++E + D ++LTTY ++ +
Sbjct: 696 LIVAPTSLMSNWRKEAEKFAPGLKVLVLHGSQ-RAERFER---IADNDLVLTTYPLLPRD 751
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
S+ L + Y+ILDE IKNP Q + + + + HR+ ++GTP++
Sbjct: 752 SEYLLKQDY------------HYLILDEAQTIKNPKAQATQLVHRLEARHRLCLTGTPME 799
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
N+L ELW+LFNF P LLGD++ FK + PI + D L+R++ L RI+
Sbjct: 800 NHLGELWSLFNFLTPGLLGDDRKFKTLFRTPIEKQGD---LERQRL--------LSRRIK 848
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF-------LNSEIVL 588
P+ LRR K EV E L +K E+ + L QR LYE+ + I
Sbjct: 849 PFMLRRTKQEVATE--------LPEKTEIQRTVLLEGKQRDLYESIRVAMDKKIRDAIAK 900
Query: 589 SAFDGSP---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
S L AL L+++C P LL +A V
Sbjct: 901 KGVKRSHIEILDALLKLRQVCCDPSLLKLDSARKV------------------------- 935
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
S K+ ++S+L L+ EG +L+FSQ ML LI+ + G +++
Sbjct: 936 ------------KSSAKLDTLMSMLPSLLEEGRKILLFSQFTSMLGLIEAQLDKAGIEYV 983
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
++ G TK DR VN FQ G+V+ +FL++ + GG+GL LT AD VI DP WNP+ +NQ
Sbjct: 984 KLTGATK--DRDTPVNRFQNGEVS-LFLISLKAGGVGLNLTAADTVIHYDPWWNPAVENQ 1040
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRE 825
+ DRAYRIGQ K V VY+L+T GTVEEKI Q K L K + F +++LR+
Sbjct: 1041 ATDRAYRIGQDKPVFVYKLITEGTVEEKIVELQKQKQALADNLLADKAEKFTFDEEELRK 1100
Query: 826 LLS 828
L +
Sbjct: 1101 LFA 1103
>gi|167535979|ref|XP_001749662.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771810|gb|EDQ85471.1| predicted protein [Monosiga brevicollis MX1]
Length = 1288
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 194/615 (31%), Positives = 303/615 (49%), Gaps = 86/615 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L P+Q GLRWL SL+ GIL D+MGLGKT+Q L L + LV+
Sbjct: 449 VGGKLKPYQMYGLRWLVSLYNNRINGILADEMGLGKTIQTIALLTYLVEKKNNSGPFLVI 508
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P LS+W EL S Y G V+ R + Q VLLTTY+++ +
Sbjct: 509 VPLATLSNWRLELAKWAPSLVTVAYRGNKVERRVFHQQIKDVRFNVLLTTYEMIIKDRAL 568
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPIQNN 477
L + F + W YMI+DEGH +KN + +++L+ SA R++++GTP+QN+
Sbjct: 569 LSKACF--------NISWRYMIIDEGHRMKNSKNKLSQTLMHYFSAPRRLLLTGTPLQNS 620
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELW+L NF P++ + F + P ++ LD E++ + +L + ++P+
Sbjct: 621 LPELWSLLNFILPDVFNSSDTFDSWFSAPFAETSENVELDAEEK--QLIILQLHKILRPF 678
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD---GS 594
LRRLK EV L K E ++ +++ QR+LY ++ S+ GS
Sbjct: 679 LLRRLKKEV--------ETQLPDKVEHVIKCEMSALQRKLYVCMQKYGVIPSSTQSTSGS 730
Query: 595 PLAALTI------------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAA--LAEKLA 640
+ AL ++K+C HP L K +D+ +L EDAA LA
Sbjct: 731 NMEALDATKARSLQNVVMQMRKLCCHPFLF-KEVEQDL---KSELLRHEDAATALANLNG 786
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQES 696
+ + A K L LLD +IP+ GH +L+FSQ ML+++++
Sbjct: 787 LELWRTAGK-----------------LELLDHMIPKLRRFGHRILLFSQFTTMLDILEDY 829
Query: 697 IGSKGYKFLRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRVIVVD 755
+ K+ R+DGT A+ R ++++DF D IF+L+++ GGLGL L AD V++ D
Sbjct: 830 FRYRRLKYCRMDGTCGAAKRAELLHDFNAPDSDLEIFILSTRAGGLGLNLQTADTVVIFD 889
Query: 756 PAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLF- 805
WNP D Q+ DRA+RIGQ K+V V+RL+T +VEE++ + Q+ + G F
Sbjct: 890 SDWNPHQDLQAQDRAHRIGQTKEVRVFRLVTVQSVEERMLERAREKLDVDQQVIQAGKFN 949
Query: 806 KTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNM----DESLEAHI 861
+TA E+ + + LL + +Q D + +H D + M DE LEA +
Sbjct: 950 QTADENDTK---------KMLLEIIQQANDDDDEIEAGVTDHEDLNRMLARSDEELEAFV 1000
Query: 862 QFLDTLGIAGVSHHS 876
Q + + + HS
Sbjct: 1001 QMDEEIANNDQAWHS 1015
>gi|407037695|gb|EKE38751.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
nuttalli P19]
Length = 1627
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 180/558 (32%), Positives = 280/558 (50%), Gaps = 84/558 (15%)
Query: 270 LDDYSDDSVLEDEGSITLSGPRSTYML---PGKIGNMLFPHQREGLRWLWSLHCQGKGGI 326
LD+Y + D ++ P + + P + N L +Q EGL WL C+GKG I
Sbjct: 612 LDEYKKFHIPPDPSTVEPPLPDRLWQVQEHPYRHDNTLRSYQMEGLNWLVFNWCRGKGCI 671
Query: 327 LGDDMGLGKTMQICGFLAGL-FHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFG 385
L D+MGLGKT+Q+ F L +L LVV P + L HW +E+ + Y G
Sbjct: 672 LADEMGLGKTVQVVAFFEHLRSFQKLPGPFLVVTPLSTLEHWRREINE-WTDMNVVVYLG 730
Query: 386 TCVKTRQ----YELQYVLQDKG---------VLLTTYDIVRNNSKSLRGSSFISDEAGDD 432
T + RQ YE Y+ +D+ L+TTY+++ +SD
Sbjct: 731 TK-ENRQLIQHYEWFYLNKDEKEISKQIKFHALITTYEMI------------MSDYEILS 777
Query: 433 DAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPEL 492
W ++DE +KN S++ K+L EIPS H+I+++GTPIQNN+ ELW L NF PE
Sbjct: 778 QIHWQVTVVDEAQRLKNKSSKLNKTLTEIPSYHKILLTGTPIQNNIDELWTLLNFINPEN 837
Query: 493 LGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDV 552
+ F EK+ G+ K A K L+ IQPY LRR+K V
Sbjct: 838 FPSLENFHEKF------GDAKTA---------DGVKALQTEIQPYLLRRVKGNV------ 876
Query: 553 TSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFDGSPLAAL----TILKKIC 606
++ K E+++ + LT Q++ Y A N E + GS + L L+K+C
Sbjct: 877 --EKSIPPKEEILIEVELTLVQKKYYRALYDKNREFLNKGCVGSNVPHLQNLMIQLRKVC 934
Query: 607 DHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFI 666
+HP L+ +++ NP+D + F ++ S K+ +
Sbjct: 935 NHPFLIPGVEEKEIA-------NPDDP----------------ESFAQELIKSSGKMVLL 971
Query: 667 LSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEG 726
LL KL +GH VLIFSQ + +L+++++ + K Y + R+DG+ +++DR ++ F +G
Sbjct: 972 DKLLPKLNADGHKVLIFSQLKGVLDILEKYLSYKKYTYERLDGSVRSNDRQNAIDRFMKG 1031
Query: 727 DVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMT 786
+ +FLL ++ GG+G+ L++AD VI+ D WNP D Q+ R +RIGQKK+V VYRL++
Sbjct: 1032 ERF-VFLLCTRAGGIGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQKKEVKVYRLVS 1090
Query: 787 CGTVEEKIYRKQIFKGGL 804
T E ++ + K GL
Sbjct: 1091 KNTYERYMFERASMKLGL 1108
>gi|124481796|gb|AAI33116.1| LOC553504 protein [Danio rerio]
Length = 1105
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 294/599 (49%), Gaps = 100/599 (16%)
Query: 286 TLSGPRSTYMLPGK-------IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ 338
T GP ++L G I L +QREG+++++ + + +G ILGDDMGLGKT+Q
Sbjct: 33 TPPGPSEAFLLAGSDVKVPYTINRYLRDYQREGIKFIYQNYAKSRGCILGDDMGLGKTVQ 92
Query: 339 ICGFLAGLFHS----------------------RLIKRALVVAPKTLLSHWIKELTAVGL 376
+ GFLA + R+ K ++VAP ++L +W EL G
Sbjct: 93 VIGFLAAVLQKTGTWKDVENNRPQFLLSQKPSERVQKVFVIVAPLSVLYNWKDELDTWG- 151
Query: 377 SAKIREYFGTCVK---TRQYELQYVLQDKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDD 432
+F V + EL V + + + LTTY+ +R D+
Sbjct: 152 ------HFRVVVVHGVRKDEELARVQRGRCEIALTTYETLR----------LCLDQFNSI 195
Query: 433 DAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPEL 492
+ W +I+DE H IKN ++ +++ ++ RI ++GT +QNNL+ELW + N+ P
Sbjct: 196 N--WAAVIVDEAHKIKNHKSKITQAMKQMRCKVRIGLTGTILQNNLEELWCVMNWAVPRC 253
Query: 493 LGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDV 552
LG FK ++ PI +G R G +EL +++ +FLRR K+ +
Sbjct: 254 LGSLGAFKNRFSDPIEKGQKHTVTKRALAEGRKAVQELAKKLSRWFLRRTKSLI------ 307
Query: 553 TSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV------------------------L 588
S L KK++ +V+ LT QR +Y A L+S+ V L
Sbjct: 308 --SDQLPKKDDRVVYCSLTDFQRTVYRAVLDSDDVTLMLQSSGKCPCSSGRPRKKCCYKL 365
Query: 589 SAFDGSPL-----AALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHI 643
+A DG P+ + L IL+K+ +H LL + DG + E++
Sbjct: 366 NA-DGVPVRHLYFSYLAILRKVANHVALLQSK------DGTSKKQEKYVTTICEQVFRKF 418
Query: 644 ADVAEK---DDFQEQHDNI-SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGS 699
D E+ F+ D + S K+ + LL+ I + VL+FS + K+L++++ +
Sbjct: 419 PDFTERCKQAAFEAMSDPMYSGKMKVMQKLLNHFIAKKDKVLLFSLSTKLLDVLESYCMA 478
Query: 700 KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
+G ++ R+DG TK+ DRVKIV +F + L+++ GGLGL A+ V++ DP WN
Sbjct: 479 EGLEYHRLDGNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNFIGANVVVLFDPTWN 538
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
P+ D Q++DR YRIGQ +DV V+RL++ GTVEE IY +Q++K L + + RYF
Sbjct: 539 PANDLQAIDRVYRIGQCRDVTVFRLISLGTVEEIIYLRQVYKQQLQSSVIGQENARRYF 597
>gi|149239498|ref|XP_001525625.1| DNA repair and recombination protein RAD54 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146451118|gb|EDK45374.1| DNA repair and recombination protein RAD54 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 875
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 179/564 (31%), Positives = 286/564 (50%), Gaps = 56/564 (9%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P ++ K+ +L PHQ G+++L+ + KG I+ D+MGLGKT+Q +
Sbjct: 268 PNVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLQDPRAKGCIMADEMGLGKTLQCLTLMW 327
Query: 345 GLFHS-----RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVL 399
L R I++ ++V P +L+ +W E+ + T+ +L L
Sbjct: 328 TLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSNDLGLAL 387
Query: 400 QD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
Q + VL+ +Y+ +R N L G+ E G M+ DEGH +KN
Sbjct: 388 QQWSTAQGRNIVRPVLIISYETLRRNVDKLAGT-----EVG-------LMLADEGHRLKN 435
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
+ +L + R+I+SGTPIQN+L E ++L NF P LG F+ +E ILR
Sbjct: 436 GDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRRNFENAILR 495
Query: 510 GNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR 569
G D A D+E+ G EL + + + +RR N++ S L K E +++
Sbjct: 496 GRDADATDKEREKGDQKLSELSQLVSKFIIRR-TNDIL-------SKYLPVKYEYVLFTG 547
Query: 570 LTSCQRQLYEAFLNS-EI--VLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
L Q++LY F+ S EI +L PL A+ +LKK+C+HP LL D ++G D
Sbjct: 548 LAPMQKKLYHHFITSPEIKKLLKGIGSQPLKAIGMLKKLCNHPDLLN---LPDDIEGCDD 604
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQ 685
++ PED + I +E S K + L K+ E ++ +++ S
Sbjct: 605 LI-PEDYVSS------IHGHGGGGRNREIQTWFSGKFQVLERFLHKIKRETNDKIVLISN 657
Query: 686 TRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLT 744
+ L+LI++ K Y LR+DGT + R K+V+ F + D A IFLL+S+ GG G+
Sbjct: 658 YTQTLDLIEKMCRYKKYGALRLDGTMNINKRQKLVDRFNDPDGAEFIFLLSSKAGGCGIN 717
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
L A+R++++DP WNP++D Q++ R +R GQKKD +YR ++ GT+EEKI+++Q K L
Sbjct: 718 LIGANRLVLIDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSL 777
Query: 805 FKTATEHKEQI-RYFSQQDLRELL 827
+ KE + R FS +LR+L
Sbjct: 778 SSCVVDEKEDVERLFSADNLRQLF 801
>gi|447915870|ref|YP_007396438.1| SNF2 family domain/helicase domain protein [Pseudomonas poae
RE*1-1-14]
gi|445199733|gb|AGE24942.1| SNF2 family domain/helicase domain protein [Pseudomonas poae
RE*1-1-14]
Length = 901
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 179/509 (35%), Positives = 259/509 (50%), Gaps = 64/509 (12%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRL 351
T + P + L P+Q EGL W+ SL GGIL DDMGLGKT+Q + L RL
Sbjct: 414 TCVAPQGLNATLRPYQLEGLSWMQSLRQLDVGGILADDMGLGKTLQTLAHILTEKAAGRL 473
Query: 352 IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ-YVLQDKGVLLTTYD 410
+ +VV P +L+ +W+ E K+ +G K + LQD +LLTTY
Sbjct: 474 DRPCMVVMPTSLIPNWLDEAAHFTPQLKVLALYGAGRKKHFAPSKDQSLQDYDLLLTTYA 533
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L +ILDE IKNP+++ A++ E+ + R+ +S
Sbjct: 534 LLPKDIEQLAALPL------------HVLILDEAQYIKNPNSKAAQAARELNARQRLCLS 581
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LGD K F Y +PI EKR + L
Sbjct: 582 GTPLENHLGELWSLFHFLLPGWLGDVKSFNRDYRVPI-----------EKRASEVRLQHL 630
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 631 NGRIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNEAQRDVYETM--------- 673
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L KL D+ +
Sbjct: 674 -------RLAMDKKVRDE--ITRKGVARSQIIILEALL---------KLRQVCCDLRLVN 715
Query: 651 DFQ-EQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDG 709
D H + S K+ ++ +LD+L EG VL+FSQ ML+LI+ + +G + + G
Sbjct: 716 DASLPAHGSSSGKLDSLMQMLDELFAEGRRVLLFSQFTSMLSLIEVELQQRGIAYALLTG 775
Query: 710 TTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDR 769
T+ DR V DFQ G + IFL++ + GG+GL LT+AD VI DP WNP+T+NQ+ DR
Sbjct: 776 QTR--DRRTPVKDFQSGKLK-IFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDR 832
Query: 770 AYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
AYRIGQ+K V VY+++ GTVEEKI Q
Sbjct: 833 AYRIGQEKPVFVYKMIARGTVEEKIQHLQ 861
>gi|428673166|gb|EKX74079.1| helicase family member protein [Babesia equi]
Length = 932
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 175/518 (33%), Positives = 268/518 (51%), Gaps = 65/518 (12%)
Query: 306 PHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLL 364
P+Q EGLRWL LH +G GIL D+MGLGKT Q +A L S I LV+APK+ +
Sbjct: 108 PYQLEGLRWLVGLHNKGLNGILADEMGLGKTFQTISLMAYLKESCGIDGPHLVLAPKSTI 167
Query: 365 SHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVL-QDK-GVLLTTYDIVRNNSKSLRGS 422
+WI E+ S ++ ++ G + R Y + L QDK V++T+Y+ ++L
Sbjct: 168 GNWINEINRFCPSLRVLKFIGN-KEERAYLINNELDQDKYDVIVTSYETCCKTKRALCKL 226
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELW 482
W Y+I+DE H IKN ++ ++ + + +R++I+GTP+QNNLKELW
Sbjct: 227 D------------WKYIIIDEAHRIKNEESKLSEVVRMFQTEYRLLITGTPLQNNLKELW 274
Query: 483 ALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRL 542
AL NF PE+ ++ F++ ++L + + +RE R +A+ L E ++P+ LRR
Sbjct: 275 ALLNFLFPEVFASSEEFEQVFDL--VGPKELTQAERESRNLQIIAR-LHEILRPFMLRRS 331
Query: 543 KNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV-LSAFDGSP------ 595
K +V E + KNE+++ + L++ Q+QLY L + L A D +
Sbjct: 332 KKDVLTE--------MPPKNELLLMVPLSAMQKQLYRDLLRKNVPELGAEDNTKSGLQVQ 383
Query: 596 -LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQE 654
L L+K C+HP L DG + D F E
Sbjct: 384 LLNLAMQLRKACNHPYL---------FDGYED--------------------RNDDPFGE 414
Query: 655 QHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKAS 714
+ K++ + LL +L+ +LIFSQ +ML+++++ +GY + RIDG T +
Sbjct: 415 HLVENAGKLNLVDKLLHRLLKSNSRILIFSQMARMLDILEDYCRMRGYLYFRIDGNTSSE 474
Query: 715 DRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRI 773
DR ++ F D IFLL+++ GGLG+ L AD VI+ D WNP D Q++DRA+RI
Sbjct: 475 DRDHQISSFNAPDSEVSIFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAIDRAHRI 534
Query: 774 GQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH 811
GQ K V VYRL+ T+EEKI + K L +H
Sbjct: 535 GQLKPVHVYRLVHEYTIEEKIIERATLKLQLDSAVIQH 572
>gi|61402625|gb|AAH91795.1| LOC553504 protein, partial [Danio rerio]
Length = 1069
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 294/599 (49%), Gaps = 100/599 (16%)
Query: 286 TLSGPRSTYMLPGK-------IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ 338
T GP ++L G I L +QREG+++++ + + +G ILGDDMGLGKT+Q
Sbjct: 33 TPPGPSEAFLLAGSDVKVPYTINRYLRDYQREGIKFIYQNYAKSRGCILGDDMGLGKTVQ 92
Query: 339 ICGFLAGLFHS----------------------RLIKRALVVAPKTLLSHWIKELTAVGL 376
+ GFLA + R+ K ++VAP ++L +W EL G
Sbjct: 93 VIGFLAAVLQKTGTWKDVENNRPQFLLSQKPSERVQKVFVIVAPLSVLYNWKDELDTWG- 151
Query: 377 SAKIREYFGTCVK---TRQYELQYVLQDKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDD 432
+F V + EL V + + + LTTY+ +R D+
Sbjct: 152 ------HFRVVVVHGVRKDEELARVQRGRCEIALTTYETLR----------LCLDQFNSI 195
Query: 433 DAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPEL 492
+ W +I+DE H IKN ++ +++ ++ RI ++GT +QNNL+ELW + N+ P
Sbjct: 196 N--WAAVIVDEAHKIKNHKSKITQAMKQMRCKVRIGLTGTILQNNLEELWCVMNWAVPRC 253
Query: 493 LGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDV 552
LG FK ++ PI +G R G +EL +++ +FLRR K+ +
Sbjct: 254 LGSLGAFKNRFSDPIEKGQKHTVTKRALAEGRKAVQELAKKLSRWFLRRTKSLI------ 307
Query: 553 TSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV------------------------L 588
S L KK++ +V+ LT QR +Y A L+S+ V L
Sbjct: 308 --SDQLPKKDDRVVYCSLTDFQRTVYRAVLDSDDVTLMLQSSGKCPCSSGRPRKKCCYKL 365
Query: 589 SAFDGSPL-----AALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHI 643
+A DG P+ + L IL+K+ +H LL + DG + E++
Sbjct: 366 NA-DGVPVRHLYFSYLAILRKVANHVALLQSK------DGTSKKQEKYVTTICEQVFRKF 418
Query: 644 ADVAEK---DDFQEQHDNI-SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGS 699
D E+ F+ D + S K+ + LL+ I + VL+FS + K+L++++ +
Sbjct: 419 PDFTERCKQAAFEAMSDPMYSGKMKVMQKLLNHFIAKKDKVLLFSLSTKLLDVLESFCMA 478
Query: 700 KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
+G ++ R+DG TK+ DRVKIV +F + L+++ GGLGL A+ V++ DP WN
Sbjct: 479 EGLEYHRLDGNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNFIGANVVVLFDPTWN 538
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
P+ D Q++DR YRIGQ +DV V+RL++ GTVEE IY +Q++K L + + RYF
Sbjct: 539 PANDLQAIDRVYRIGQCRDVTVFRLISLGTVEEIIYLRQVYKQQLQSSVIGQENARRYF 597
>gi|449016916|dbj|BAM80318.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a [Cyanidioschyzon merolae strain
10D]
Length = 849
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 175/519 (33%), Positives = 268/519 (51%), Gaps = 64/519 (12%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAP 360
G +L +Q GL WL SL+ G GIL D+MGLGKT+Q + L + L+V P
Sbjct: 178 GGVLRDYQLAGLEWLVSLYENGINGILADEMGLGKTIQCIALICHLREMGVQGPFLIVGP 237
Query: 361 KTLLSHWIKELTAVGLSAKIREYFGT-----CVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
T+L +WI E S Y GT ++ R + + V++T+Y+IV
Sbjct: 238 LTVLPNWISEFQRFAPSVYALLYHGTKSERQLLRKRHLSTRNGASNMPVVITSYEIV--- 294
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
+R ++S W Y+I+DEGH IKN Q + L SA+R++I+GTP+Q
Sbjct: 295 ---MRDRVYLSKYH------WAYIIIDEGHRIKNMDCQLLRELQSYTSANRLLITGTPLQ 345
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
NNL ELW+L +F P++ + F+E ++ GND A E++ A+ +L ++
Sbjct: 346 NNLDELWSLLHFLMPDIFDSVELFREWFDF----GNDIAAGALERQQEDAIVSKLHMILR 401
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI--VLSAFDG 593
P+ LRRLK++V + KK E+ ++ L++ QR+ Y A + I +L+A G
Sbjct: 402 PFMLRRLKSDV--------EKKMPKKREIYLFAPLSALQREYYMAIMQDRIHELLNARYG 453
Query: 594 ----SPLA---ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
PL L+K+C HP L+ + E+ DG + + A KLA+ AD
Sbjct: 454 REYTRPLTLRNKFMQLRKVCCHPYLIAE-PEENFTDGAYPITDERLVHAAGKLAL--AD- 509
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLR 706
LL +L GH VL++SQ MLN++++ + +G+K+ R
Sbjct: 510 ---------------------RLLPRLRARGHKVLLYSQFTSMLNILEDYLQLRGHKYAR 548
Query: 707 IDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
IDG+ K DR++ + F D IFL++++ GGLGL L AD VI D NP D Q
Sbjct: 549 IDGSVKFEDRIRQMEAFNSPDSEIFIFLMSTRAGGLGLNLQAADTVIFYDSDPNPQMDLQ 608
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
++DR +RIGQ+K V VYRL+T +VEE++ + + K L
Sbjct: 609 AMDRCHRIGQRKPVHVYRLVTPNSVEERMLNRAVEKRKL 647
>gi|281200733|gb|EFA74951.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 1336
Score = 262 bits (670), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 155/332 (46%), Positives = 201/332 (60%), Gaps = 24/332 (7%)
Query: 559 SKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD--GSPLAALTILKKICDHPLLLTKRA 616
++KN+ + W++L Q ++Y+ FLNSE V A + SPLAALT+LKKI DHPLLL
Sbjct: 795 TRKNDFVCWIKLAEPQIEIYKTFLNSEEVKDALNKTSSPLAALTVLKKISDHPLLLH--- 851
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
+ M S +PE + K + + N S K+ F+ LL L E
Sbjct: 852 -----EEMSSCASPEMKQIMHKFG-------DNSTIKSLVRN-SGKMQFLYYLLPNLKQE 898
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKAS-DRVKIVNDFQEGDVAPIFLLT 735
GH +LIFSQ+ KMLN I++ + FLRIDG+ +S +R K +++F FLLT
Sbjct: 899 GHRLLIFSQSVKMLNAIEQLLNYLKLSFLRIDGSISSSKERQKRIDEFNGDREIFCFLLT 958
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
QVG LGL +T ADRV++ DP+WN + DNQ+VDR YRIGQ KDVVVYRLM CGT+EEKIY
Sbjct: 959 IQVGALGLNMTSADRVVIFDPSWN-TVDNQAVDRVYRIGQTKDVVVYRLMCCGTIEEKIY 1017
Query: 796 RKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNMD 854
RKQ+FKG L KT + K Q RYFS +LREL L +VS TQ L H +
Sbjct: 1018 RKQVFKGALMKTMLNQGKGQHRYFSSSELRELFRL--DDTNVSSTQMYLEGLHSSKRKTS 1075
Query: 855 ESLEAHIQFLDTLG-IAGVSHHSLLFSKTARV 885
E L+ HIQFL LG +AG+S H LLF++ V
Sbjct: 1076 EELDQHIQFLGKLGMLAGLSDHDLLFTEEVSV 1107
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 177/301 (58%), Gaps = 21/301 (6%)
Query: 251 PDRRDGKLN---KSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPH 307
PD+ + ++N K+ +G DY D + DE + Y+L LF +
Sbjct: 446 PDKYEDQMNGFFKNLRTG------DYHDTTKYLDEKT----NKEHEYVLNADTYEALFWY 495
Query: 308 QREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHW 367
QREG+ W+W L +G GGILGDDMGLGKTMQ+ FL + SR I +LVV P +L+ HW
Sbjct: 496 QREGIDWMWKLFVKGAGGILGDDMGLGKTMQVISFLKQMHKSRFITHSLVVMPVSLIEHW 555
Query: 368 IKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISD 427
+KE + ++ Y G + RQ L+ + + GVL+TTY ++ +N + L+
Sbjct: 556 VKEFEKRQPTVRVLVYHGNNQRERQQNLETIKKLGGVLITTYGMIVSNCEPLK------- 608
Query: 428 EAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNF 487
E WDY++LDEGH IK T+ AK++ E+ + ++II++GT IQNNL+ELWALF++
Sbjct: 609 EYKRKPFTWDYIVLDEGHKIKETKTKIAKTMRELTAHYKIIMTGTAIQNNLRELWALFDW 668
Query: 488 CCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEV 546
C LLG + F K+E PIL+ + +K +GSAVA+ LR+ I PYFLRR K +V
Sbjct: 669 VCDGSLLGSVRSFASKFEKPILKAHIADTSQSQKTLGSAVAESLRQIIAPYFLRREKKDV 728
Query: 547 F 547
F
Sbjct: 729 F 729
>gi|307183105|gb|EFN70022.1| TATA-binding protein-associated factor 172 [Camponotus floridanus]
Length = 1883
Score = 262 bits (670), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 269/534 (50%), Gaps = 55/534 (10%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--LIK 353
LP + L +Q +GL WL L+ G+L DDMGLGKT+Q LA L H R
Sbjct: 1288 LPIPVAAELRSYQHQGLNWLNFLNRYHLHGVLCDDMGLGKTLQTLCILA-LDHHRNPQAP 1346
Query: 354 RALVVAPKTLLSHWIKE----LTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
+LVV P TL HW+ E A LS + +Y GT + +L+ + +++ +Y
Sbjct: 1347 TSLVVCPPTLTGHWVYEAEKFFKAQDLS--VIQYAGT--PQEREKLRPRVSHHRLVVASY 1402
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
DIVR + + W+Y +LDEGH+IKN T+ AK+ + + HR+I+
Sbjct: 1403 DIVRKDIEFFETHQ------------WNYCVLDEGHVIKNGKTKSAKAAKRLHAHHRLIL 1450
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
SGTP+QN++ ELW+LF+F P LG K F KY PIL + A +E+ G+ +
Sbjct: 1451 SGTPVQNDVLELWSLFDFLMPGFLGSEKQFAAKYSRPILACREPKAGPKEQEAGALAMEA 1510
Query: 530 LRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLS 589
L ++ P+ LRR K +V + L K + L+ QR LYE F L+
Sbjct: 1511 LHRQVLPFLLRRNKEDVLQD--------LPPKITQDYYCDLSPLQRILYEDFRTRHSALT 1562
Query: 590 AF---------DGSPLAALTILKKICDHP-LLLTKRAAEDVLDGMDSMLNPEDAALAE-- 637
+ G AL L+ +C+HP L+L++R + + ML + + LAE
Sbjct: 1563 SSSSSSSSDPQSGHVFEALRYLRNVCNHPKLVLSQR--HPLYQAVCDMLKQQQSNLAEIE 1620
Query: 638 ------KLAMHIADVAEKDDFQEQHDNISCKISFIL-SLLDKLIPEGHNVLIFSQTRKML 690
L + D Q+ N S + S ++ + H LIF Q + ML
Sbjct: 1621 HGAKLPALKQLLLDCGIGQQQQQARLNSSVTANLAAESAQEQQLVSQHRALIFCQLKAML 1680
Query: 691 NLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
+++++ + +LR+DG+ A+ R +V F + LLT+QVGGLGL LT
Sbjct: 1681 DIVEKDLLRTHLPTVTYLRLDGSVPAAQRHSVVARFNADPSIDVLLLTTQVGGLGLNLTG 1740
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T TVEEKI Q FK
Sbjct: 1741 ADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRSTVEEKIMGLQKFK 1794
>gi|326670150|ref|XP_689596.5| PREDICTED: hypothetical protein LOC553504 [Danio rerio]
Length = 1269
Score = 262 bits (670), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 181/598 (30%), Positives = 291/598 (48%), Gaps = 98/598 (16%)
Query: 286 TLSGPRSTYMLPGK-------IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ 338
T GP ++L G I L +QREG+++++ + + +G ILGDDMGLGKT+Q
Sbjct: 35 TPPGPSEAFLLAGSDVKVPYTINRYLRDYQREGIKFIYQNYAKSRGCILGDDMGLGKTVQ 94
Query: 339 ICGFLAGLFHS----------------------RLIKRALVVAPKTLLSHWIKELTAVGL 376
+ GFLA + R+ K ++VAP ++L +W EL G
Sbjct: 95 VIGFLAAVLQKTGTWKDVENNRPQFLLSQKPSERVQKVFVIVAPLSVLYNWKDELDTWG- 153
Query: 377 SAKIREYFGTCVK---TRQYELQYVLQDKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDD 432
+F V + EL V + + + LTTY+ +R D+
Sbjct: 154 ------HFRVVVVHGVRKDEELARVQRGRCEIALTTYETLR----------LCLDQFNSI 197
Query: 433 DAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPEL 492
+ W +I+DE H IKN ++ +++ ++ RI ++GT +QNNL+ELW + N+ P
Sbjct: 198 N--WAAVIVDEAHKIKNHKSKITQAVKQMRCKVRIGLTGTILQNNLEELWCVMNWAVPRC 255
Query: 493 LGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDV 552
LG FK ++ PI +G R G +EL +++ +FLRR K+ +
Sbjct: 256 LGSLGAFKNRFSDPIEKGQKHTVTKRALAEGRKAVQELAKKLSRWFLRRTKSLI------ 309
Query: 553 TSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF--------------------- 591
S L KK++ +V+ LT QR +Y A L+S+ V
Sbjct: 310 --SDQLPKKDDRVVYCSLTDFQRTVYRAVLDSDDVTLMLQSSGKCPCSSGRPRKKCCYKL 367
Query: 592 --DGSPL-----AALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA 644
DG P+ + L IL+K+ +H LL + DG + E++
Sbjct: 368 NADGVPVRHLYFSYLAILRKVANHVALLQSK------DGTSKKQEKYVTTICEQVFRKFP 421
Query: 645 DVAEK---DDFQEQHDNI-SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK 700
D E+ F+ D + S K+ + LL+ I + VL+FS + K+L++++ ++
Sbjct: 422 DFTERCKQAAFEAMSDPMYSGKMKVMQKLLNHFIAKKDKVLLFSLSTKLLDVLESYCMAE 481
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
G ++ R+DG TK+ DRVKIV +F + L+++ GGLGL A+ V++ DP WNP
Sbjct: 482 GLEYHRLDGNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNFIGANVVVLFDPTWNP 541
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
+ D Q++DR YRIGQ +DV V+RL++ GTVEE IY +Q++K L + + RYF
Sbjct: 542 ANDLQAIDRVYRIGQCRDVTVFRLISLGTVEEIIYLRQVYKQQLQSSVIGQENARRYF 599
>gi|367010258|ref|XP_003679630.1| hypothetical protein TDEL_0B02900 [Torulaspora delbrueckii]
gi|359747288|emb|CCE90419.1| hypothetical protein TDEL_0B02900 [Torulaspora delbrueckii]
Length = 1874
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 190/593 (32%), Positives = 294/593 (49%), Gaps = 74/593 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--- 350
+ +P I L +Q++GL WL L+ GIL DDMGLGKT+Q +A + R
Sbjct: 1270 FKMPVAIKATLRKYQQDGLNWLAFLNKYYLHGILCDDMGLGKTLQTICIIASDQYLRNED 1329
Query: 351 ------LIKR---ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
L R +L+V P +L HW E K+ Y G + +Y L+ L +
Sbjct: 1330 YQKTKSLKTRPLPSLIVCPPSLTGHWESEFEQYSPFLKVIVYAGG--PSVRYPLRDKLSE 1387
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YD+ RN+ L + +Y +LDEGH+IKN ++ AK++ +I
Sbjct: 1388 ADVIVTSYDVARNDLAVLTKFDY------------NYCVLDEGHIIKNSQSKLAKAVKQI 1435
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + + +++
Sbjct: 1436 SANHRLILTGTPIQNNVVELWSLFDFLMPGFLGTEKMFQERFAKPIGASRNSKSYSKDQE 1495
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK +V + L K + L+ Q+QLY+ F
Sbjct: 1496 KGALALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSDLQKQLYKDF 1547
Query: 582 LNSE--IVLSAFDGSP--------LAALTILKKICDHPLLLTK------RAAEDVL---- 621
+ +V + + AL ++K+C+HP L+ R E+ L
Sbjct: 1548 SKKQKNVVEKDIESNTDVEGKQHIFQALQYMRKLCNHPALVLSPDHPQLRQVEEYLRQTH 1607
Query: 622 -DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
D D P+ AL L + E+D ++ N ++S H
Sbjct: 1608 MDLHDITNAPKLEALRNLLLE--CGIGEQDVDKKNSQNQLPSTENVIS--------QHRA 1657
Query: 681 LIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
LIF Q + ML++++ + K ++R+DG+ + DR K+V F + LLT++
Sbjct: 1658 LIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSVEPRDRQKVVRKFTDDPSIDCLLLTTK 1717
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLGL LT AD VI V+ WNP +D Q++DRA+R+GQKK V VYR++T GT+EEKI
Sbjct: 1718 VGGLGLNLTGADTVIFVEHDWNPMSDLQAMDRAHRLGQKKVVNVYRIITKGTLEEKIMGL 1777
Query: 798 QIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQ 850
Q FK + T +Q + D +LL L FD Q +EE Q
Sbjct: 1778 QKFKMNIASTVV--NQQNNGLANMDTHQLLDL----FDSDNVPSQENEEAQPQ 1824
>gi|67474889|ref|XP_653178.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56470108|gb|EAL47792.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449706113|gb|EMD46028.1| chromodomain helicase DNA binding protein, putative [Entamoeba
histolytica KU27]
Length = 1641
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 283/563 (50%), Gaps = 94/563 (16%)
Query: 270 LDDYSDDSVLEDEGSITLSGPRSTYML---PGKIGNMLFPHQREGLRWLWSLHCQGKGGI 326
LD+Y + D +I P + + P + N L +Q EGL WL C+GKG I
Sbjct: 612 LDEYKKFHIPPDPSTIEPPLPDRLWQVQEHPYRHDNTLRSYQMEGLNWLVFNWCRGKGCI 671
Query: 327 LGDDMGLGKTMQICGFLAGL-FHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFG 385
L D+MGLGKT+Q+ F L +L LVV P + L HW +E+ + Y G
Sbjct: 672 LADEMGLGKTVQVVAFFEHLRSFQKLPGPFLVVTPLSTLEHWRREINE-WTDMNVVVYLG 730
Query: 386 TCVKTRQ----YELQYVLQDKG---------VLLTTYDIVRNNSKSLRGSSFISDEAGDD 432
T + RQ YE Y+ +D+ L+TTY+++ +SD
Sbjct: 731 TK-ENRQLIQHYEWFYLNKDEKEISKQIKFHALITTYEMI------------MSDYEILS 777
Query: 433 DAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPEL 492
W ++DE +KN S++ K+L EIPS H+I+++GTPIQNN+ ELW L NF PE
Sbjct: 778 QIHWQVTVVDEAQRLKNKSSKLNKTLTEIPSYHKILLTGTPIQNNIDELWTLLNFINPEN 837
Query: 493 LGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDV 552
+ F EK+ G+ K A K L+ IQPY LRR+K V
Sbjct: 838 FPSLENFHEKF------GDAKTA---------DGVKALQTEIQPYLLRRVKGNV------ 876
Query: 553 TSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFDGSPLAAL----TILKKIC 606
++ K E+++ + LT Q++ Y A N E + GS + L L+K+C
Sbjct: 877 --EKSIPPKEEILIEVELTLVQKKYYRALYDKNREFLNKGCVGSNVPHLQNLMIQLRKVC 934
Query: 607 DHPLLLTKRAAEDVLDGMDSMLNPEDA-ALAEKLAMHIADVAEKDDFQEQHDNISCKISF 665
+HP L+ +++ NP+D + A++L K S
Sbjct: 935 NHPFLIPGVEEKEIA-------NPDDPESYAQEL---------------------IKSSG 966
Query: 666 ILSLLDKLIP----EGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVN 721
+ LLDKL+P +GH VLIFSQ + +L+++++ + K Y + R+DG+ +++DR ++
Sbjct: 967 KMVLLDKLLPKLNADGHKVLIFSQLKGVLDILEKYLSYKKYTYERLDGSVRSNDRQNAID 1026
Query: 722 DFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 781
F +G+ +FLL ++ GG+G+ L++AD VI+ D WNP D Q+ R +RIGQKK+V V
Sbjct: 1027 RFMKGERF-VFLLCTRAGGIGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQKKEVKV 1085
Query: 782 YRLMTCGTVEEKIYRKQIFKGGL 804
YRL++ T E ++ + K GL
Sbjct: 1086 YRLVSKNTYERYMFERASMKLGL 1108
>gi|167395605|ref|XP_001741658.1| DNA repair and recombination protein RAD54B [Entamoeba dispar
SAW760]
gi|165893723|gb|EDR21860.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
dispar SAW760]
Length = 837
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 204/643 (31%), Positives = 309/643 (48%), Gaps = 85/643 (13%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGK--GGILGDDMGLGKTMQICGFLAGLFHSRL 351
+ L I N L PHQR G++WLW H + K G ILGDDMGLGKT++I F+ GL ++
Sbjct: 93 FWLSVDIFNKLLPHQRTGIKWLWEHHNETKIHGCILGDDMGLGKTVEILAFVLGLTNNSF 152
Query: 352 IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDI 411
+ L+V P + W E + R+ + + + G+LLTTY++
Sbjct: 153 SRTFLIVVPAMVALQWQTEAKKWCPPVTLYSIHHMSPPDRRAAISSIQINGGILLTTYNL 212
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
V+N DEA WDY+ILDE H IK+ ++ + L + H+I +G
Sbjct: 213 VQN------------DEANLGVINWDYIILDEAHTIKSRISKASSVLKSFKAKHKIAATG 260
Query: 472 TPIQNNLKELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK-- 528
TP+ NNL ELW + +F LLG+ F+ +E I N L EK S AK
Sbjct: 261 TPMMNNLLELWNIMDFTTDGALLGNYSQFQSYFERIISNAN----LRNEK---SPFAKRR 313
Query: 529 --ELRERIQPYFLRRLKNEVFHEDDVTSSAT----------------------LSKKNEM 564
EL +RI PY LRR K +VF +D T++ T K E+
Sbjct: 314 LLELSKRIGPYILRRTKKDVFGDDRPTTTLTPHPQEKDDEEGKNSENSKCLTLTVNKYEL 373
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLSAFDG----SPLAALTILKKICDHPLLLTKRAAEDV 620
IVW++L S Q+ +Y L S I +S + + ++ L+K C +P A +DV
Sbjct: 374 IVWVKLDSNQKMIYTRLLRS-INMSELKMHKVRTIIGMISYLEKSCSNP-----PAIKDV 427
Query: 621 L-DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
L D ++ E + ++ +++ C+ +
Sbjct: 428 LEDQTKPFIDNEIIKMVDEETINLWPKLT----VLLKLLKMCEKT------------NEK 471
Query: 680 VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
VL+FSQ ++ L+ I + + SK FLRIDG R + + F + L+T +VG
Sbjct: 472 VLLFSQYQRTLDSISDLLQSKDILFLRIDGDLDDGLRKERLRRFNHMSSWGVLLMTIRVG 531
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GL +T A RV++ D W+ + NQ+VDRAYRIGQKKDVV YR+++CGTVEEK+YR+Q+
Sbjct: 532 ACGLNITGASRVVIFDEGWS-TIGNQAVDRAYRIGQKKDVVTYRIVSCGTVEEKMYRRQV 590
Query: 800 FK---GGLFKTATEHKEQIR-YFSQQDLRELLSLPKQGFDVSLTQQQLHEEHG-DQHNMD 854
K L + K++ R +F++++L L + FD S T + NM
Sbjct: 591 HKTTLTELTLETNQEKQRFRHWFTKKELYTLFDSSQVNFDNSETHLIFKQYKPLYPQNMP 650
Query: 855 ES---LEAHIQFLDTL-GIAGVSHHSLLFSKTARVQVVQEEEE 893
E L+ HI+ ++ + + GVS HS + ++V E E
Sbjct: 651 EYPDWLDNHIKEIEKVDNVFGVSDHSFIIKTDIPDELVYENIE 693
>gi|194901180|ref|XP_001980130.1| GG16968 [Drosophila erecta]
gi|190651833|gb|EDV49088.1| GG16968 [Drosophila erecta]
Length = 1925
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 273/545 (50%), Gaps = 65/545 (11%)
Query: 287 LSGPRST--YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
L P+S Y +P I L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LA
Sbjct: 1333 LFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILA 1392
Query: 345 G-LFHSRLIKRA----LVVAPKTLLSHWIKELTAV---GLSAKIREYFGTCVKTRQYELQ 396
G H + + A LV+ P TL HW+ E+ G + Y+G V R+
Sbjct: 1393 GDHLHRQTVSLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGLPVG-REKLRS 1451
Query: 397 YVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+ +++ +YD VR + G F +Y +LDEGH+IKN T+ +K
Sbjct: 1452 EIGTKCNLVVASYDTVRKDIDFFSGIHF------------NYCVLDEGHIIKNGKTKSSK 1499
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
++ + + HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PIL D +
Sbjct: 1500 AIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSS 1559
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+E+ G + L ++ P+ LRR+K +V + L K + L+ Q +
Sbjct: 1560 AKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKD--------LPPKITQDLLCELSPLQLR 1611
Query: 577 LYEAFLNSEI--VLSAFDGSPLA---------------ALTILKKICDHPLLLTKRAAED 619
LYE F N + L S A AL L+ +C+HP L+ +++ E
Sbjct: 1612 LYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEE- 1670
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
L + S L +++L + H A + + C I + + H
Sbjct: 1671 -LTKVTSQLALSNSSLDD--IEHSAKLPALKQLL-----LDCGIGVQTESVSQ-----HR 1717
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML+++++ + + +LR+DG+ AS R IVN+F + LLT+
Sbjct: 1718 ALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTT 1777
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI
Sbjct: 1778 MVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMG 1837
Query: 797 KQIFK 801
Q FK
Sbjct: 1838 LQKFK 1842
>gi|383457794|ref|YP_005371783.1| SNF2/helicase domain-containing protein [Corallococcus coralloides
DSM 2259]
gi|380735186|gb|AFE11188.1| SNF2/helicase domain-containing protein [Corallococcus coralloides
DSM 2259]
Length = 981
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 170/537 (31%), Positives = 266/537 (49%), Gaps = 89/537 (16%)
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR 354
+LP ++ L +Q++G+ WL L G GGIL DDMGLGKT+Q L +
Sbjct: 531 VLPAELNATLRAYQQQGVSWLSFLKGAGLGGILADDMGLGKTLQTICILG--------PK 582
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
+LVV P ++L +W+ EL S K+ Y G K + LTTY ++R
Sbjct: 583 SLVVCPTSVLPNWVAELQRFRPSLKVCVYHGPGRKLDP--------TADITLTTYALLRL 634
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
++ L + W+ ++LDE IKNP +Q +++ + + R+ +SGTP+
Sbjct: 635 DAAVLGAPT------------WEAVVLDEAQAIKNPESQVSRAAFGLKANLRLALSGTPL 682
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
+N L ELW+L +F P LLG + F+EK PI G A+ LR RI
Sbjct: 683 ENRLDELWSLMHFTNPGLLGGRRQFEEKTAQPIADGK------------PGAAEGLRRRI 730
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL---NSEIVLSAF 591
+P+ LRRLK +V E L + + ++ ++L +R +Y+A + +E+V
Sbjct: 731 RPFILRRLKRDVAPE--------LPPRTDSVMHVQLDERERSVYDAVMAATRAEVVALLN 782
Query: 592 DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
+G VL ++++L AA L
Sbjct: 783 EGG------------------------SVLKALEALLRLRQAACHSAL------------ 806
Query: 652 FQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTT 711
QH S K+ ++ L+ + EGH L+FSQ +L+LI+ + G F R+DG T
Sbjct: 807 VPGQHAKTSSKVQTLVDALETAVSEGHKALVFSQWTSLLDLIEPGLKEAGIGFERLDGAT 866
Query: 712 KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
++R ++ + FQ D AP+ L++ + GG GL LT AD V ++DP WNP+ + Q+ DRA+
Sbjct: 867 --ANRGEVTSRFQGQDGAPVLLMSLKAGGTGLNLTAADHVFLMDPWWNPAVEAQAADRAH 924
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLS 828
RIGQ++ V+VYRL++ GTVEEKI Q K LF+ A +++DL +L +
Sbjct: 925 RIGQERPVMVYRLVSQGTVEEKILGLQEKKRALFEAALSEAAGAAAITREDLLQLFA 981
>gi|367032442|ref|XP_003665504.1| hypothetical protein MYCTH_2309353 [Myceliophthora thermophila ATCC
42464]
gi|347012775|gb|AEO60259.1| hypothetical protein MYCTH_2309353 [Myceliophthora thermophila ATCC
42464]
Length = 804
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 183/574 (31%), Positives = 286/574 (49%), Gaps = 76/574 (13%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ ++ +L PHQ +G+++++ C + G I+ D+MGLGKT+Q
Sbjct: 201 PRVPVVIDPRLAKVLRPHQIDGVKFMY--RCVTGMIDEKAHGCIMADEMGLGKTLQCITL 258
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
L L I++A+V P +L+ +W ELT L A F K + EL
Sbjct: 259 LWTLLKQSPEAGKPTIQKAIVACPSSLVRNWANELTK-WLGADAINPFAIDGKASKEELT 317
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N + LR + M+ DEGH
Sbjct: 318 RQLRQWAISTGRSITRPVIIVSYETLRLNVEELRNTPI------------GLMLCDEGHR 365
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN +Q +L + + R+I+SGTPIQN+L E +AL NF P+LLG F++++ELP
Sbjct: 366 LKNGDSQTFNALNSLNVSRRVILSGTPIQNDLSEYFALINFANPDLLGTRLEFRKRFELP 425
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A + E++ G EL + + +RR N++ S L K E +V
Sbjct: 426 ILRGRDADASEAERQRGDECLAELLGIVNKFIIRR-TNDIL-------SKYLPVKYEHVV 477
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ +L Q LY F+ S + + G PL A+ ILKK+C+HP LL A L G
Sbjct: 478 FCKLAPFQLALYNYFITSPGIQALLRGKGSQPLKAIGILKKLCNHPDLLDLAAD---LPG 534
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GH 678
+ PED E + + +I S + +LD+++
Sbjct: 535 CEQFW-PEDYVPKEA--------------RGRDRDIRPWYSGKMQVLDRMLARIRADTND 579
Query: 679 NVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQE--GDVAPIFLLTS 736
+++ S + L+L + S+GY LR+DG + R K+V+ F + GD +FLL+S
Sbjct: 580 KIVLISNYTQTLDLFERLCRSRGYGCLRLDGAMNVNKRQKLVDKFNDPNGDEF-VFLLSS 638
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+ GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI++
Sbjct: 639 KAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQ 698
Query: 797 KQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
+Q K L + E + R+FS LREL
Sbjct: 699 RQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQF 732
>gi|345568371|gb|EGX51265.1| hypothetical protein AOL_s00054g335 [Arthrobotrys oligospora ATCC
24927]
Length = 1921
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 273/546 (50%), Gaps = 77/546 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH----- 348
+ LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q ++ H
Sbjct: 1327 FHLPVAIQAELRSYQQEGVNWLAFLNRYHLHGILCDDMGLGKTLQTICIVSSDHHLRAED 1386
Query: 349 --------SRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
SR I +L+V P TL HW +E+ Y G + + EL+ L
Sbjct: 1387 FSKTQNPESRQIP-SLIVCPSTLSGHWQQEIKQYAPFLTTLVYVGN--PSERSELRNQLG 1443
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++T+YDI RN+ + + W+Y +LDEGH+IKN + ++++ +
Sbjct: 1444 STDIVITSYDICRNDLEHISKHD------------WNYCVLDEGHIIKNSKAKLSQAVKK 1491
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
I + HR+I+SGTPIQN++ ELW+LF+F P LG K F +++ PI + + +E+
Sbjct: 1492 IRANHRLILSGTPIQNSVLELWSLFDFLMPGFLGTEKVFMDRFAKPIANSRNSKSSSKEQ 1551
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK EV DD L K + L+ Q+QLY+
Sbjct: 1552 EAGALAIEALHKQVLPFVLRRLKEEVL--DD------LPPKIIQNYYCELSELQKQLYQE 1603
Query: 581 FL--NSEIVLSAFDGSP------LAALTILKKICDHPLL-----------LTKRAAEDVL 621
F S+ + D S AL ++K+C+ P L + K+ A+D
Sbjct: 1604 FSKKQSKDLPGTGDSSKEQKQHIFQALQYMRKLCNSPALVLNEKHPKYAAVQKQLAQDNT 1663
Query: 622 DGMDSMLNPEDAALAEKL---AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
D + P+ +AL + L + A+ DDF + IS H
Sbjct: 1664 SIRDPLHAPKLSALKDLLLDCGIGATVSAKDDDFAVASNAIS----------------QH 1707
Query: 679 NVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLT 735
LIF Q ++ML++++ + K +LR+DG T R +V F + LLT
Sbjct: 1708 RALIFCQLKEMLDIVESDVLKKLLPTVSYLRMDGATDPRYRQDMVTKFNSDPSIDVLLLT 1767
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+ VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI
Sbjct: 1768 THVGGLGLNLTGADTVIFVEHDWNPQKDMQAMDRAHRIGQKKVVNVYRLITRGTLEEKIM 1827
Query: 796 RKQIFK 801
Q FK
Sbjct: 1828 NLQRFK 1833
>gi|452988358|gb|EME88113.1| hypothetical protein MYCFIDRAFT_75949 [Pseudocercospora fijiensis
CIRAD86]
Length = 1840
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 273/537 (50%), Gaps = 59/537 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ +P I L +Q++G+ WL L+ G+L DDMGLGKT+Q +A H R
Sbjct: 1239 FKIPVAIKAELRSYQQDGVNWLAFLNRYNLHGVLCDDMGLGKTLQTLCIVASDHHLRAEE 1298
Query: 352 --------IKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
++R +L++ P TL HW +E+ Y G + + Q L+
Sbjct: 1299 FAKTQAPDMRRLPSLIICPPTLTGHWKQEIRTYAPFLHAVAYAGPPGERGKVRDQ--LET 1356
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YDI RN+ L + W+Y +LDEGHLIKNP + ++ +
Sbjct: 1357 ADVVITSYDISRNDIDILAPIN------------WNYCVLDEGHLIKNPKAKVTIAVKRL 1404
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I+SGTPIQNN+ ELW+LF+F P LG K F++++ PI + +E+
Sbjct: 1405 VANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQDRFAKPIAASRFAKSSSKEQE 1464
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK EV ++ L K + L+ Q++L++ F
Sbjct: 1465 AGALAIESLHKQVLPFLLRRLKEEVLND--------LPPKILQNYYCDLSDLQKRLFDDF 1516
Query: 582 LNSEI-VLSAFDGSP--------LAALTILKKICDHPLLLTKR-----AAEDVLDGMDSM 627
E L A GS AL ++K+C+ P ++ K AA L D
Sbjct: 1517 TKKESKSLQAMAGSADKEAKQHIFQALQYMRKLCNSPAMVMKEGHKQYAAIQALLAKDGS 1576
Query: 628 LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
N +D A KL A +D + + + + D+ + + H LIF Q +
Sbjct: 1577 -NLKDPKHAPKL------TALRDLLVDCGIGVEPTDNGGIPSADQAVSQ-HRALIFCQMK 1628
Query: 688 KMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
+ML++++ ++ K F R+DG+ +AS R IVN F LLT+ VGGLGL
Sbjct: 1629 EMLDMVESTVLKKLLPSATFARLDGSVEASKRQDIVNRFNSDPSIDCLLLTTSVGGLGLN 1688
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1689 LTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1745
>gi|45382655|ref|NP_990041.1| DNA repair and recombination protein RAD54B [Gallus gallus]
gi|51316526|sp|Q9DG67.1|RA54B_CHICK RecName: Full=DNA repair and recombination protein RAD54B; AltName:
Full=RAD54 homolog B
gi|9957289|gb|AAG09308.1|AF178529_1 Rad54b [Gallus gallus]
Length = 918
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 184/553 (33%), Positives = 287/553 (51%), Gaps = 52/553 (9%)
Query: 300 IGNMLFPHQREGLRWLW----SLHCQGK-GGILGDDMGLGKTMQICGFL-----AGLFHS 349
I N L PHQREG+ +L+ + G+ G IL D+MGLGKT+Q + G++
Sbjct: 299 IANNLRPHQREGIVFLYECVMGMRVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGC 358
Query: 350 R-LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTT 408
+ ++KRAL+V P +L+ +W KE S +I+ + T + + E V++ +
Sbjct: 359 KPVLKRALIVTPGSLVKNWKKEFQKWLGSERIKVF--TVDQDHKVEEFISSPLYSVMIIS 416
Query: 409 YDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRII 468
Y+++ + ++ F + +I DEGH +KN S + +L + RII
Sbjct: 417 YEMLLRSLDQIQAIEF------------NLLICDEGHRLKNSSIKTTTALTNLSCERRII 464
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
++GTPIQN+L+E +AL F P +LG +++ YE PI+R + A EK +G A
Sbjct: 465 LTGTPIQNDLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAA 524
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
EL R+ F+ R EV ++ L K E I++ + T+ Q +LY L+S ++
Sbjct: 525 EL-TRLTGLFILRRTQEVINK-------FLPPKKENIIFCQPTALQLELYRKLLSSRVIS 576
Query: 589 SAFDG----SP-LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHI 643
S G SP L + LKK+C+HP LL K E D D + L +
Sbjct: 577 SCLQGRLENSPHLICIGALKKLCNHPCLLFKALKEKCCDPKS------DEHVESSLYEGL 630
Query: 644 ADVAEKDDFQEQHDNI-SCKISFILSLLDKL--IPEGHNVLIFSQTRKMLNLIQESIGSK 700
DV +D + I S K+ ++ LL + + V++ S + LN++ E+
Sbjct: 631 TDVFPQDYTSDTFSEIDSGKLQVLVKLLAAIRELSSSERVVLVSNYTQTLNVLLETCKCY 690
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQEG-DVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
GY + R+DG T S R +IV+ F A IFLL+S+ GG+GL L A +I+ D WN
Sbjct: 691 GYSYTRLDGNTPVSQRQQIVDSFNSKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWN 750
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK---GGLFKTATEHKEQIR 816
P+TD Q++ R +R GQK V +YRL+T GT+EEKIY++QI K G ++ E I
Sbjct: 751 PATDIQAMARVWRDGQKCTVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLSKTSEHI- 809
Query: 817 YFSQQDLRELLSL 829
+FS ++LR L +L
Sbjct: 810 HFSVEELRNLFTL 822
>gi|345564001|gb|EGX46983.1| hypothetical protein AOL_s00097g222 [Arthrobotrys oligospora ATCC
24927]
Length = 1390
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 180/565 (31%), Positives = 288/565 (50%), Gaps = 61/565 (10%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++L+ + + G I+ D+MGLGKT+Q +
Sbjct: 210 PRVAVVIDPRLAKVLRPHQIEGVKFLYRATTGLIDSKAHGCIMADEMGLGKTLQCITLMW 269
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL--- 395
L I++ ++ P +L+ +W EL I F K + EL
Sbjct: 270 TLLKQSPEAGRPTIRKCVIACPSSLVRNWANELVKWLGEGTIHP-FAVDGKATKEELISQ 328
Query: 396 --QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
Q+ + + VL+ +Y+ +R +K L GS+ I M+ DEGH +K
Sbjct: 329 LKQWAIASGNQVVRPVLIVSYETLRLYAKEL-GSTEIG-----------LMLCDEGHRLK 376
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + +L E+ R+I+SGTPIQN+L E ++L NF P+ LG F++KYE+PIL
Sbjct: 377 NGESLTFTALTELNVKRRVILSGTPIQNDLTEYFSLLNFANPDYLGSRADFRKKYEMPIL 436
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D ++ ++ + G KEL + + +RR N++ S L K E +V+
Sbjct: 437 RGRDANSDEKTREKGDERLKELFGLVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 488
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L QR LY F+ S V G PL A+ +LKK+C+HP LL D L G +
Sbjct: 489 GLAPFQRDLYNHFVTSSEVRKLLRGVGCKPLKAINVLKKLCNHPDLL---ELPDDLHGSE 545
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
P D + A D + + S K+ + +L ++ + ++ +++ S
Sbjct: 546 QFF-PSD---------FVPKAARGRDGRYVNVCYSGKMLVLDRMLARIRQDTNDKIVLIS 595
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGL 743
+ L++ ++ SKGY FLR+DGT + R K+V+ F D IFLL+S+ GG GL
Sbjct: 596 NYTQTLDVFEKLARSKGYGFLRLDGTMNVNKRQKLVDKFNNPDGDEFIFLLSSKAGGCGL 655
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K
Sbjct: 656 NLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQS 715
Query: 804 LFKTATEHKEQI-RYFSQQDLRELL 827
L + + + R+F +DLR+L
Sbjct: 716 LSSCVVDEAQDVERHFGSEDLRKLF 740
>gi|350421782|ref|XP_003492955.1| PREDICTED: TATA-binding protein-associated factor 172-like [Bombus
impatiens]
Length = 1872
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 190/542 (35%), Positives = 277/542 (51%), Gaps = 50/542 (9%)
Query: 287 LSGPRST--YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
L PRS +LP + L +Q++GL WL L+ G+L DDMGLGKT+Q LA
Sbjct: 1270 LLNPRSIPDTVLPIPVSAELRSYQQQGLNWLNFLNRYRLHGVLCDDMGLGKTLQTLCILA 1329
Query: 345 GLFHSR--LIKRALVVAPKTLLSHWIKELTAVGLSA--KIREYFGTCVKTRQYELQYVLQ 400
L H R +LVV P TL HW+ E + + +Y GT + +L+ ++
Sbjct: 1330 -LDHHRNPCAPPSLVVCPPTLTGHWVYEAEKFFKTKDLSVLQYVGT--PPEREKLRPMVT 1386
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++ +Y+I+R + + W+Y +LDEGH+IKN T+ AK+
Sbjct: 1387 YHKLVVASYEIIRKDIDYF------------ETCQWNYCVLDEGHIIKNGKTKSAKATKR 1434
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ + HR+I+SGTPIQN++ ELW+LF+F P LG K F KY PIL + A +E+
Sbjct: 1435 LHANHRLILSGTPIQNDVLELWSLFDFLMPGFLGTEKQFAAKYSRPILACREPKAGPKEQ 1494
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L ++ P+ LRR K +V + L K + L+S QR LYE
Sbjct: 1495 EAGALAMEALHRQVLPFLLRRNKEDVLKD--------LPPKITQDYYCDLSSLQRTLYED 1546
Query: 581 FLN--SEIVLSAFD--------GSPLAALTILKKICDHP-LLLTKR-----AAEDVLDGM 624
F S +LSA S AL L+ +C+HP L+L +R + L
Sbjct: 1547 FHTRRSATLLSAASCTSTGNNGCSVFEALRYLRNVCNHPKLVLNQRHPLYATVCNTLKQR 1606
Query: 625 DSMLNP-EDAALAEKLAMHIADVAEKDDFQEQHDN-ISCKISFILSLLDKLIPEGHNVLI 682
S L+ E AA L + D ++Q+ N ++ S ++ + H LI
Sbjct: 1607 KSTLSEIEYAAKLPALKQLLLDCGIGQPQRQQNRNSVTTDTSDNQPPQEQQLVSQHRALI 1666
Query: 683 FSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q + ML+++++ + +LR+DG+ + + R IV F + LLT+QVG
Sbjct: 1667 FCQLKAMLDIVEKDLLCAHLPTVTYLRLDGSVQTTQRHSIVTRFNADPSIDVLLLTTQVG 1726
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T TVEEKI Q
Sbjct: 1727 GLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRSTVEEKIMGLQK 1786
Query: 800 FK 801
FK
Sbjct: 1787 FK 1788
>gi|401888028|gb|EJT51996.1| helicase [Trichosporon asahii var. asahii CBS 2479]
Length = 1757
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/547 (34%), Positives = 272/547 (49%), Gaps = 68/547 (12%)
Query: 287 LSGPRS-TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG 345
L G R+ +Y LP I L +Q++G+ WL L GIL DDMGLGK++Q +
Sbjct: 1172 LDGSRAESYELPINIKADLRQYQKDGVSWLAFLAKYQLHGILCDDMGLGKSLQTICIVGS 1231
Query: 346 LFHSRLIKR------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQY 393
H R + +L+V P TL HW E+ + +Y G +++
Sbjct: 1232 KHHERAARYKATKSVDSAHLPSLIVCPPTLTGHWYHEIRKFTDELRPVQYVGNA--SQRA 1289
Query: 394 ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQ 453
L+ L+ V++T+Y+ VRN+ L + W Y +LDEGH+IKN T+
Sbjct: 1290 SLRPHLKQYDVVITSYEAVRNDIADLGRMN------------WLYCVLDEGHVIKNAKTK 1337
Query: 454 RAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDK 513
++++ +I S HR+++SGTPIQNN+ ELW+LF+F P LG + F E++ PIL D
Sbjct: 1338 LSQAVKQIRSQHRLLLSGTPIQNNVLELWSLFDFLMPGFLGSERAFNERFSKPILADRDG 1397
Query: 514 HALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSC 573
A +E+ SA + L +++ P+ LRRLK +V + L K + L+
Sbjct: 1398 KATAKEREAASAALEALHKQVLPFLLRRLKEDVLSD--------LPPKIIQDYYCDLSDV 1449
Query: 574 QRQLYEAFLNSEIVLSAFDGSP--------LAALTILKKICDHPLLLT---KRAAEDVLD 622
Q+ +Y+ F +S A + + +L L+K+C+HP L+ K+A V
Sbjct: 1450 QKVMYDEFSHSNAAEEAGEFAAGGGGQTHVFQSLQYLRKLCNHPALVLRDDKQALAKVEH 1509
Query: 623 GMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG----- 677
+ + D + A KL E + L +DK P G
Sbjct: 1510 KLGKVPPLHDLSHAPKL--------------EALKQLLTDCGIGLPQVDKSDPSGPFTGS 1555
Query: 678 HNVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLL 734
H VLIF Q R ML+LI+ + ++R+DG T R IV F + LL
Sbjct: 1556 HRVLIFCQLRPMLDLIESDLFRAHMPTVSYMRLDGATDPRKRHAIVETFNADPKIDVLLL 1615
Query: 735 TSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI 794
T+ VGGLGL LT AD VI VD WNP D Q++DRA+R+GQKK V VYRL+T GT+EEKI
Sbjct: 1616 TTSVGGLGLNLTGADTVIFVDHDWNPMKDLQAMDRAHRLGQKKVVNVYRLITRGTLEEKI 1675
Query: 795 YRKQIFK 801
Q FK
Sbjct: 1676 MGLQRFK 1682
>gi|366990683|ref|XP_003675109.1| hypothetical protein NCAS_0B06540 [Naumovozyma castellii CBS 4309]
gi|342300973|emb|CCC68738.1| hypothetical protein NCAS_0B06540 [Naumovozyma castellii CBS 4309]
Length = 1342
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 273/540 (50%), Gaps = 76/540 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK-RALVV 358
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + LF + LV+
Sbjct: 457 VGGTLKEYQIRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLFEEKKDPGPYLVI 516
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S Y GT + R + Q + + VLLTTY+ +
Sbjct: 517 VPLSTITNWTLEFEKWAPSLNTVIYKGTPNQRRNLQHQVRIGNFDVLLTTYEYI------ 570
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D A W +MI+DEGH +KN ++ + ++ + HR+I++GTP+QNN
Sbjct: 571 ------IKDRALLAKHEWTHMIIDEGHRMKNAQSKLSYTITHYYKTRHRLILTGTPLQNN 624
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P++ K F++ + P L+ + V + L + ++P+
Sbjct: 625 LPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTGEKLELTEEETLLVIRRLHKVLRPF 684
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFDGSP 595
LRRLK EV E D L K E +V +L+ Q+QLYE L N+ + +G+
Sbjct: 685 LLRRLKKEV--EKD------LPDKVEKVVKCKLSGLQQQLYEQMLKHNALFLGEGTEGAT 736
Query: 596 LAAL-------TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
+ + L+KIC+HP V D ++ ++NP A
Sbjct: 737 KSGIKGLNNKIMQLRKICNHPF---------VFDEVEGVINPTRA--------------- 772
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+ N+ ++S LL++++P+ GH VL+F Q ++++++++ + K K+
Sbjct: 773 -------NSNLLYRVSGKFELLNRVLPKFKAAGHRVLMFFQMTQVMDIMEDFLRMKDLKY 825
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
+R+DG+TKA DR ++NDF D FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 826 MRLDGSTKADDRTGMLNDFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD 885
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKEQ 814
Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +EQ
Sbjct: 886 LQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQ 945
>gi|384485625|gb|EIE77805.1| hypothetical protein RO3G_02509 [Rhizopus delemar RA 99-880]
Length = 752
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 171/551 (31%), Positives = 277/551 (50%), Gaps = 63/551 (11%)
Query: 300 IGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR---- 350
+G +L PHQ EG+++L+ +H G I+ D+MGLGKT+Q + L
Sbjct: 204 LGRVLRPHQVEGVKFLYQCTTGKVHPDAAGCIMADEMGLGKTLQCIALVWTLLQQSEAIG 263
Query: 351 --LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYF----GTCVKTRQYELQYVLQDK-- 402
I +A+V P +L+ +W E ++R GT K + Q +
Sbjct: 264 KPTINKAIVTCPSSLVKNWANEFVKWLGENRVRPLVVDSGGTKEKVAAVKRWGAAQGQIV 323
Query: 403 -GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+L+ +Y+ +R SK LR S ++ DEGH +KN + + L +
Sbjct: 324 NPILIISYESLRTYSKYLRKSPI------------GMLLCDEGHRLKNSESLLFQELNSL 371
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
P R+I+SGTPIQN+L E ++L +F P LLG F+ YE PILRG D A ++E++
Sbjct: 372 PVTKRVILSGTPIQNDLSEYYSLLDFANPGLLGTPSEFRRNYENPILRGRDADASEKERQ 431
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
+ E + + + +RR N++ S L K E +V+ +L Q LY F
Sbjct: 432 VSDEKVAEFWKIVSRFTIRR-TNDIL-------SKYLPTKYEHVVFCKLAPLQEALYNVF 483
Query: 582 LNSEIVLSAFDGS---PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
L S + + G PL A+T+LKK+C+HP LL + L+G +S+L P
Sbjct: 484 LTSPEIKTLLRGQGSQPLKAITLLKKLCNHPSLLN---LPNDLEGCESVLPPN------- 533
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESI 697
H ++ E+ + S K + + +L K+ E + +++ S + L+L +
Sbjct: 534 --YHNSNKIEQ--------SFSGKFAVMARMLAKIKKETKDKIVLISNYTQTLDLFEAYC 583
Query: 698 GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDP 756
+ Y LR+DG+ R K+V+ F + + +FLL+S+ GG GL L A+R+++ DP
Sbjct: 584 QEQQYGVLRLDGSMTIPKRQKLVDRFNDPEGGEFVFLLSSKAGGCGLNLIGANRLVLFDP 643
Query: 757 AWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIR 816
WNP+ D Q++ R +R GQKKD +YR + GT+EEKI+++Q K L + + R
Sbjct: 644 DWNPAADQQALARVWRDGQKKDCYIYRFIAAGTIEEKIFQRQSHKQSLSNCVVDEADMER 703
Query: 817 YFSQQDLRELL 827
+FS D+R+L
Sbjct: 704 HFSLADMRQLF 714
>gi|449278270|gb|EMC86176.1| Putative DNA repair and recombination protein RAD26-like protein,
partial [Columba livia]
Length = 684
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 190/596 (31%), Positives = 281/596 (47%), Gaps = 117/596 (19%)
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS----- 349
+P I L +QREG ++L+ + +G ILGDDMGLGKT+Q+ FLA + H
Sbjct: 98 FIPYTINRYLRDYQREGAQFLYRHYANKRGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 157
Query: 350 -----------RLIKRA---------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCV- 388
R +K+ L+VAP ++L +W EL G YF CV
Sbjct: 158 DIENNMPEFLLRTMKKESKCNPKKTFLIVAPLSVLYNWKDELDTWG-------YFKVCVL 210
Query: 389 --KTRQYELQYVLQDKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGH 445
+ +L + Q K V LTTY+I+R L F S E W +I+DE H
Sbjct: 211 HGSKKDDDLNRIKQGKCEVALTTYEILR-----LYLDEFNSVE-------WSAVIVDEAH 258
Query: 446 LIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYEL 505
IKNP Q +++ + + RI ++GT +QNN+KELW + ++ P LLG FK+K+
Sbjct: 259 RIKNPKAQITQTMKSLKCSVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKKFSD 318
Query: 506 PILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMI 565
P+ G A RE G +L ++ +FLRR K + S L KK + +
Sbjct: 319 PVEHGQRHTATKRELATGRKAMVKLARKMSGWFLRRTKALI--------SDQLPKKEDRM 370
Query: 566 VWLRLTSCQRQLYEAFLNSE---IVLSAFDGSPLAA------------------------ 598
V+ LT Q+ +Y+A L +E +VL A G P +
Sbjct: 371 VYCSLTEFQKAVYQAVLETEDVSLVLRA--GEPCSCNSGRRRKNCCYKVNAHGETIKSLR 428
Query: 599 ---LTILKKICDHPLLL------------TKRAAEDVLDGMDSMLN-PEDAALAEKLAMH 642
LTIL+K+ +H LL KR V + +DAA
Sbjct: 429 FSYLTILRKVANHAALLQTDNTSKQQEAHIKRVCAQVFSSFPDFVQLSKDAAFET----- 483
Query: 643 IADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGY 702
I+D S K+ + LL+ VL+FS + K+L+++++ + G
Sbjct: 484 ISD-----------PKYSGKMKVLQQLLNHFRRNRDKVLLFSFSTKLLDVLEQYCMASGL 532
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+ R+DG TK+ DR +IV +F I L+++ GGLGL A+ VI+ DP WNP+
Sbjct: 533 DYRRLDGNTKSEDRTRIVREFNSTQEINICLVSTMAGGLGLNFVGANVVILFDPTWNPAN 592
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
D Q++DRAYRIGQ K V V+RL++ GTVEE +Y +Q++K L + RYF
Sbjct: 593 DLQAIDRAYRIGQYKAVKVFRLISLGTVEEMMYLRQVYKQQLHCAVVGSENAKRYF 648
>gi|198416532|ref|XP_002119473.1| PREDICTED: similar to TATA-binding protein-associated factor 172
(ATP-dependent helicase BTAF1) (TBP-associated factor
172) (TAF-172) (TAF(II)170) (B-TFIID transcription
factor-associated 170 kDa subunit), partial [Ciona
intestinalis]
Length = 1335
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 185/555 (33%), Positives = 280/555 (50%), Gaps = 78/555 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-------- 345
Y +P KI L P+Q +G++WL L+ G+L DDMGLGKT+Q LA
Sbjct: 743 YKIPVKINAKLRPYQEDGVKWLAFLNRYKLHGVLCDDMGLGKTLQTICILASDHFYQANK 802
Query: 346 -----LFHS-RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVL 399
FHS +LI +LVV P TL HW+ E+ + Y G T + LQ +
Sbjct: 803 KQENEKFHSGKLI--SLVVCPPTLTGHWVAEVRQFCELLTPQHYAGN--PTERLRLQGEV 858
Query: 400 QDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLL 459
+ +++ +Y+++RN+ + F S W+Y +LDEGH IKN ++ ++ +
Sbjct: 859 KKHNLVIASYEVIRNDIE------FFSQIK------WNYCVLDEGHAIKNGKSKLSQCIK 906
Query: 460 EIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDRE 519
+ + HR+I++GTPIQN++ ELW+LF+F P LLG F +Y PI+ D + E
Sbjct: 907 SLYAKHRLILTGTPIQNSVLELWSLFDFLIPGLLGSESEFNARYSKPIIASRDAKSSSVE 966
Query: 520 KRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYE 579
+ G + L ++ P+ LRR+K +V + L K + L+ Q QLYE
Sbjct: 967 QEEGLIAMESLHRQVLPFMLRRMKEDVLKD--------LPPKIIQDYYCELSPLQFQLYE 1018
Query: 580 AFLNS----------EIVLSAFDGSPLA--------ALTILKKICDHPLLLTKRAAEDVL 621
F S +I+ D + L AL L+K+C+HPL + +
Sbjct: 1019 DFAKSRAKKDAESSIKIIDEEKDQTNLMKGTSHVFQALQYLQKVCNHPLFVLTPS----- 1073
Query: 622 DGMDSMLNPEDAALAEKL-----AMHIADVAEKDDFQEQHDNISCKISFIL-SLLDKLIP 675
+P+ A+ +L ++H A K +Q + C I SL ++ +
Sbjct: 1074 -------HPQYNAIMTQLKKSKTSLHDVKHASKLTALQQLL-LDCGIGKTGDSLSEESVA 1125
Query: 676 EGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIF 732
H L+F Q R +LN+I+ + + G +LR+DG ++ R IV+ F +
Sbjct: 1126 NQHRALVFCQHRNLLNIIENDLLRQLMPGVTYLRLDGGVPSNQRYSIVSKFNNDPSIDLL 1185
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LLT++VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EE
Sbjct: 1186 LLTTKVGGLGLNLTGADTVIFVEHDWNPMVDLQAMDRAHRIGQKKVVNVYRIITRGTMEE 1245
Query: 793 KIYRKQIFKGGLFKT 807
KI Q FK + T
Sbjct: 1246 KILGLQEFKLNVANT 1260
>gi|168019640|ref|XP_001762352.1| chromatin remodeling complex SWI/SNF protein [Physcomitrella patens
subsp. patens]
gi|162686430|gb|EDQ72819.1| chromatin remodeling complex SWI/SNF protein [Physcomitrella patens
subsp. patens]
Length = 1289
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 287/555 (51%), Gaps = 82/555 (14%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LIKRALVVA 359
G L +Q EGL+W+ SL+ GIL D+MGLGKT+Q L+ L ++ ++ +++A
Sbjct: 543 GGQLRAYQIEGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYLLENKGVVGPHIIIA 602
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSKS 418
PK +L +W EL+ + Y G + R +Y + K VL+T YD++
Sbjct: 603 PKAVLPNWAHELSTWAPGIQTVLYDGRAEERRLLREEYGGEGKFNVLVTHYDLI------ 656
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNN 477
+R +F+ W+YMI+DEGH +KN +++L R++++GTPIQN+
Sbjct: 657 MRDKAFLKK------VKWNYMIVDEGHRLKNHDCMLSRTLTTGYHIRRRLLLTGTPIQNS 710
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L+ELW+L NF P + ++ F++ + P +D + E+ + V + L + I+P+
Sbjct: 711 LQELWSLLNFLLPAIFNSSENFEDWFNAPFTDRSDVSLTEEEQLL---VIRRLHQVIRPF 767
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS-EIVLSAFDGSPL 596
LRR K EV L K ++I+ +++ QR Y+ + S + L G
Sbjct: 768 LLRRKKAEV--------EKFLPGKTQVILKCDMSAWQRLYYKQIMESGRVGLDIGTGKSR 819
Query: 597 AALTI---LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQ 653
L L+K C+HP L L+G D PE+ +D+
Sbjct: 820 GLLNTAMQLRKCCNHPYLF--------LEGRD--YEPEN----------------RDELI 853
Query: 654 EQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKA 713
S K + LL KL GH VL+FSQ ++++++++ + G+KFLR+DGTTK
Sbjct: 854 RS----SGKFELLDRLLPKLAKTGHRVLLFSQMTRLMDILEDYLEWHGFKFLRLDGTTKT 909
Query: 714 SDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
+R ++ F D +P +FLL+++ GGLGL L AD VI+ D WNP D Q+ DRA+
Sbjct: 910 EERGTLLQKFNAPD-SPYFMFLLSTRAGGLGLNLQTADTVILFDSDWNPQMDQQAEDRAH 968
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKEQIRYFSQQD 822
RIGQKK+V V+ L++ G++EE+I + ++ + GLF T + + Q+
Sbjct: 969 RIGQKKEVRVFVLVSVGSIEEEILERAKSKMGIDAKVIQAGLFNTTS---------TAQE 1019
Query: 823 LRELL-SLPKQGFDV 836
RE+L + ++G DV
Sbjct: 1020 RREMLEEIMRRGSDV 1034
>gi|170693768|ref|ZP_02884925.1| Non-specific serine/threonine protein kinase [Burkholderia graminis
C4D1M]
gi|170141186|gb|EDT09357.1| Non-specific serine/threonine protein kinase [Burkholderia graminis
C4D1M]
Length = 1162
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 187/557 (33%), Positives = 287/557 (51%), Gaps = 72/557 (12%)
Query: 288 SGPRSTYM-LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAG 345
+GPR + +P + L +Q++GL W+ L QG G+L DDMGLGKT+Q + LA
Sbjct: 653 AGPRLREVPVPAALRAQLRAYQQQGLNWMQYLREQGLAGVLADDMGLGKTVQTLAHILAE 712
Query: 346 LFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVL 405
RL K AL+V P TL+ +W +E K+ G K R ++ + ++
Sbjct: 713 KEAGRLDKPALIVVPTTLVHNWREEARRFAPELKVLVLNGPQRKERFEQIG----EHELI 768
Query: 406 LTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH 465
LTTY ++ + K L + +ILDE +KN +T+ A+++ + + H
Sbjct: 769 LTTYALLWRDQKVLAEHQY------------HLLILDEAQYVKNATTKAAQAIRGLSARH 816
Query: 466 RIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGND--KHALDREKRIG 523
R+ ++GTP++N+L ELW+ F+F P LG K F ++ PI + ND + +L
Sbjct: 817 RLCLTGTPLENHLGELWSQFDFLLPGFLGSQKDFTRRWRNPIEKNNDGVRRSL------- 869
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
L RI+P+ LRR K+EV E L K ++ + L QR LYE
Sbjct: 870 ------LARRIRPFMLRRRKDEVAKE--------LPAKTTIVCSVDLEGAQRDLYETVRT 915
Query: 584 S--EIVLSAFDGSPLA--------ALTILKKICDHPLLL-TKRAAEDVLDGMDSMLNPED 632
+ E V +A LA AL L+++C P L+ T R A++V
Sbjct: 916 AMQERVRAAVSAQGLARSHIIVLDALLKLRQVCCDPRLVRTLRTAQNV------------ 963
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNL 692
++E + A ++K + + S K+ +LS+L +LI EG VL+FSQ ML+L
Sbjct: 964 GEVSEGSSTQTARASDKTEKGVR----SAKLDLLLSMLPELIDEGRRVLLFSQFTGMLSL 1019
Query: 693 IQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVI 752
I +++ ++ + G T +DRV V FQ+G+V P+FL++ + GG+GL LT AD VI
Sbjct: 1020 IAQALDEAAIPYVILTGDT--TDRVTPVQRFQQGEV-PLFLISLKAGGVGLNLTAADTVI 1076
Query: 753 VVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA-TEH 811
DP WNP+ +NQ+ DRA+R+GQ K V VY+L+ G++EEKI Q K GL + +E
Sbjct: 1077 HYDPWWNPAAENQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILSED 1136
Query: 812 KEQIRYFSQQDLRELLS 828
FS DL L +
Sbjct: 1137 AAGAAKFSDDDLDALFA 1153
>gi|170720849|ref|YP_001748537.1| non-specific serine/threonine protein kinase [Pseudomonas putida
W619]
gi|169758852|gb|ACA72168.1| Non-specific serine/threonine protein kinase [Pseudomonas putida
W619]
Length = 1108
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 263/509 (51%), Gaps = 65/509 (12%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKRA 355
P + L P+Q++GL WL +L G GGILGDDMGLGKT+Q + L + RL A
Sbjct: 631 PAALNATLRPYQQQGLNWLQALREMGTGGILGDDMGLGKTLQALAHLLLEKQNGRLAHPA 690
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
L V P +L+ +W+ E ++ G +++ + L + ++LTTY +V +
Sbjct: 691 LAVMPTSLVPNWLDEAQRFAPDLRVLALHGPG-RSKHFA---KLHEYDLVLTTYALVPRD 746
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
+ LR W ++LDE IK+ +++ A+++ E+ + R+ ++GTP++
Sbjct: 747 LEHLRAQQ------------WSVLVLDEAQNIKSSTSKAAQAVCELQANQRLCLTGTPME 794
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
NNL ELW++F+F P LG+ K F + Y PI R D L L RI+
Sbjct: 795 NNLGELWSIFHFLMPGWLGEVKRFNQDYRTPIERHGDAERL-----------SHLVHRIR 843
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRR K +V E L K EM+ W+ L+ QR YEA V A D
Sbjct: 844 PFLLRRTKEQVATE--------LPPKTEMVHWVELSDAQRDTYEA------VRVAMD--- 886
Query: 596 LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQ 655
KK+ + + AA + +D++L +L + + D
Sbjct: 887 -------KKVREE--IARNGAARSQIVILDALLKLRQVCCDLRLVKGVEIKGNQAD---- 933
Query: 656 HDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASD 715
K+ +L +L++L+ EG VL+FSQ ML LI++ + + ++ + G T+ D
Sbjct: 934 ----KGKLGALLDMLEELLSEGRRVLLFSQFTSMLALIEQELEKRKIRYSLLTGDTR--D 987
Query: 716 RVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ 775
R V FQ+GD + +FL++ + GG+GL LT AD VI DP WNP+++NQ+ DRAYRIGQ
Sbjct: 988 RRTPVQQFQQGD-SEVFLISLKAGGVGLNLTAADTVIHFDPWWNPASENQATDRAYRIGQ 1046
Query: 776 KKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
K V V++L+T GTVEEKI + Q K L
Sbjct: 1047 DKPVFVFKLITRGTVEEKIQQLQQEKAAL 1075
>gi|255728815|ref|XP_002549333.1| DNA repair and recombination protein RAD54 [Candida tropicalis
MYA-3404]
gi|240133649|gb|EER33205.1| DNA repair and recombination protein RAD54 [Candida tropicalis
MYA-3404]
Length = 847
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 184/607 (30%), Positives = 300/607 (49%), Gaps = 65/607 (10%)
Query: 251 PDRRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQRE 310
PD R K K H L +L ++ + P ++ K+ +L PHQ
Sbjct: 206 PDERPAKRRK-VHKSLAEIL------GIVTNPEEKLAKYPDVPVVIDPKLAKILRPHQVA 258
Query: 311 GLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAP 360
G+++L+ + + KG I+ D+MGLGKT+Q + L + I + ++V P
Sbjct: 259 GVKFLYRCTAGLIDAKAKGCIMADEMGLGKTLQCLTLMWTLLRQSPRGKKTIDKCIIVCP 318
Query: 361 KTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD----------KGVLLTTYD 410
+L+ +W E+ + T+ +L LQ + VL+ +Y+
Sbjct: 319 SSLVRNWANEIVKWLGEGALTPLAVDGKSTKSSDLGTALQQWASAQGRNIVRPVLIISYE 378
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
+R N L G+ E G M+ DEGH +KN + +L + R+I+S
Sbjct: 379 TLRRNVDKLAGT-----EVG-------LMLADEGHRLKNGESLTFTALNSLRCERRVILS 426
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTPIQN+L E +AL NF P LG FK+ +E ILRG D A ++E+ G EL
Sbjct: 427 GTPIQNDLSEYFALLNFANPGYLGTRNEFKKNFENAILRGRDADATEKEREKGDQKLVEL 486
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS---EIV 587
+ + + +RR N++ S L K E +++ L+ Q+ LY F+NS + +
Sbjct: 487 SQLVSKFIIRR-TNDIL-------SKYLPVKYEYVLFTGLSPMQKSLYSHFINSPDMKKL 538
Query: 588 LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
+ PL A+ +LKK+C HP LL D ++G D ++ P+D I+
Sbjct: 539 IRGIGSQPLKAIGLLKKLCSHPDLLD---LPDDIEGCDHLI-PDD------YESSISHNG 588
Query: 648 EKDDFQ--EQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKF 704
+ F+ E S K + L K+ E ++ +++ S + L+LI++ +K Y
Sbjct: 589 GRGGFRNSEVQTWFSVKFMILERFLHKIKKETNDKIVLISNYTQTLDLIEKMCRNKKYGV 648
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DGT + R K+V+ F D + IFLL+S+ GG G+ L A+R++++DP WNP++D
Sbjct: 649 LRLDGTLSINKRQKLVDKFNNPDGSEFIFLLSSKAGGCGINLIGANRLVLIDPDWNPASD 708
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQD 822
Q++ R +R GQKKD +YR ++ GT+EEKI+++Q K L + KE + R FS +
Sbjct: 709 QQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLQLSSCVVDEKEDVDRLFSSDN 768
Query: 823 LRELLSL 829
LR+L
Sbjct: 769 LRKLFEF 775
>gi|440738742|ref|ZP_20918268.1| SNF2 family domain/helicase domain protein [Pseudomonas fluorescens
BRIP34879]
gi|440380847|gb|ELQ17404.1| SNF2 family domain/helicase domain protein [Pseudomonas fluorescens
BRIP34879]
Length = 901
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 178/509 (34%), Positives = 259/509 (50%), Gaps = 64/509 (12%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRL 351
T + P + L P+Q EGL W+ SL GGIL DDMGLGKT+Q + L RL
Sbjct: 414 TCVAPQGLNATLRPYQLEGLSWMQSLRQLDVGGILADDMGLGKTLQTLAHILTEKAAGRL 473
Query: 352 IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ-YVLQDKGVLLTTYD 410
+ +VV P +L+ +W+ E K+ +G K + LQ+ +LLTTY
Sbjct: 474 DRPCMVVMPTSLIPNWLDEAAHFTPQLKVLALYGAGRKKHFAPSKDQSLQNYDLLLTTYA 533
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L +ILDE IKNP+++ A++ E+ + R+ +S
Sbjct: 534 LLPKDIEQLAALPL------------HVLILDEAQYIKNPNSKAAQAARELNARQRLCLS 581
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LGD K F Y +PI EKR + L
Sbjct: 582 GTPLENHLGELWSLFHFLLPGWLGDVKSFNRDYRVPI-----------EKRASEVRLQHL 630
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 631 NGRIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNEAQRDVYETM--------- 673
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L KL D+ +
Sbjct: 674 -------RLAMDKKVRDE--ITRKGVARSQIIILEALL---------KLRQVCCDLRLVN 715
Query: 651 DFQ-EQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDG 709
D H + S K+ ++ +LD+L EG VL+FSQ ML+LI+ + +G + + G
Sbjct: 716 DASLPAHGSSSGKLDSLMQMLDELFAEGRRVLLFSQFTSMLSLIEVELQQRGIAYALLTG 775
Query: 710 TTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDR 769
T+ DR V DFQ G + IFL++ + GG+GL LT+AD VI DP WNP+T+NQ+ DR
Sbjct: 776 QTR--DRRTPVKDFQSGKLK-IFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDR 832
Query: 770 AYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
AYRIGQ+K V VY+++ GTVEEKI Q
Sbjct: 833 AYRIGQEKPVFVYKMIARGTVEEKIQHLQ 861
>gi|361129897|gb|EHL01773.1| putative Chromatin structure-remodeling complex subunit snf21 [Glarea
lozoyensis 74030]
Length = 1375
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 170/518 (32%), Positives = 272/518 (52%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q L L + K LV+
Sbjct: 542 VGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLLTYLIEVKKQKGPFLVI 601
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G + + + Q + VLLTTY+ +
Sbjct: 602 VPLSTLTNWNLEFDKWAPSIVKIVYKGPPMARKNQQQQLRYGNFQVLLTTYEYI------ 655
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN S++ + +L + + +R+I++GTP+QNN
Sbjct: 656 ------IKDRPVLSKIKWIHMIIDEGHRMKNASSKLSATLTQYYATRYRLILTGTPLQNN 709
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P G DK L E++I V + L + ++
Sbjct: 710 LPELWALLNFVLPTIFKSVKSFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVLR 767
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ + +S Q +LY+ + ++++V+ G
Sbjct: 768 PFLLRRLKKDV--EKD------LPDKTEKVIKCKFSSLQTRLYKQLVTHNKLVVGDGKGG 819
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
AA + L+K+C+HP V D +++ +NP + +
Sbjct: 820 KTAARGLSNMIMQLRKLCNHPF---------VFDEVENQMNPLNTS-------------- 856
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++++++ + +G KF
Sbjct: 857 --------NDLLWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDYLRYRGIKF 908
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
+R+DGTTK+ DR +++ F D IFLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 909 MRLDGTTKSDDRSELLKLFNAPDSEYFIFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD 968
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 969 LQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAKFK 1006
>gi|442322965|ref|YP_007362986.1| SNF2/helicase domain-containing protein [Myxococcus stipitatus DSM
14675]
gi|441490607|gb|AGC47302.1| SNF2/helicase domain-containing protein [Myxococcus stipitatus DSM
14675]
Length = 1017
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 269/535 (50%), Gaps = 89/535 (16%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKR 354
LP + L P+Q +G+ WL L G GG+L DDMGLGKT+Q IC + G K
Sbjct: 568 LPSDLTAKLRPYQLQGVSWLTFLRQAGLGGVLADDMGLGKTLQTIC--MVG-------KG 618
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
LVVAP ++L +W E+ S K+ Y G + + + V LTTY ++R
Sbjct: 619 TLVVAPTSVLPNWHAEVRRFRPSLKVSVYHGPG--------RSLDETADVTLTTYALMRL 670
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+++ L WD ++LDE IKNP +Q A++ + + R+ +SGTPI
Sbjct: 671 DAEVLGARQ------------WDMVVLDEAQAIKNPDSQVARAAYGLEAQFRLALSGTPI 718
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
+N L+ELW+L +F LLG K F+E++ P+ N K A +R LR RI
Sbjct: 719 ENRLEELWSLMHFANRGLLGGRKDFEERWARPV-SDNLKGAAER-----------LRARI 766
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--EIVLSAFD 592
+P+ LRRLK +V E L + E + + L+ +R +Y+A ++ E V+S +
Sbjct: 767 RPFVLRRLKRDVAPE--------LPPRTESVRHVTLSEHERAVYDAVYSATREEVVSQLE 818
Query: 593 GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
A VL ++++L AA L
Sbjct: 819 -----------------------AGGSVLKALEALLRLRQAACHPAL------------V 843
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
Q S K+ ++ L + +GH L+FSQ ML+LI+ ++ G F+R+DG+T
Sbjct: 844 PGQQAKSSSKVQALVEALSTAVEDGHKALVFSQWTSMLDLIEPALREAGIGFIRLDGST- 902
Query: 713 ASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYR 772
++R + FQ+ P+ L++ + G GL LT AD V +VDP WNPS +NQ+ DRA+R
Sbjct: 903 -ANRGAVAEAFQDPKGPPVMLISLKAGATGLNLTAADHVFLVDPWWNPSVENQAADRAHR 961
Query: 773 IGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELL 827
IGQ++ V+VYRL++ GTVEEKI Q K LF++A ++ DL +LL
Sbjct: 962 IGQQRPVMVYRLVSQGTVEEKILTLQDKKRALFESALGGASGGAAITRADLMQLL 1016
>gi|156403967|ref|XP_001640179.1| predicted protein [Nematostella vectensis]
gi|156227312|gb|EDO48116.1| predicted protein [Nematostella vectensis]
Length = 1552
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 268/541 (49%), Gaps = 74/541 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRALVV 358
+G L +Q GL W+ SLH GIL D+MGLGKT+Q + L RL LV+
Sbjct: 642 VGGRLKEYQLAGLEWMVSLHNNNLNGILADEMGLGKTIQTIALFSYLIEKKRLNGPFLVI 701
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+W E SA + Y G+ R V+LTTY+ V
Sbjct: 702 VPLSTLSNWQLEFEKWAPSAIVVSYKGSPNMRRSAGAVLRTGKFNVVLTTYEYV------ 755
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
+ D+A W YM++DEGH +KN + + L + HRI+++GTP+QN
Sbjct: 756 ------MRDKAILAKVRWKYMVVDEGHRMKNHHCKLTQVLNTHYAAQHRILLTGTPLQNR 809
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P +K L+ E+ I + + L + ++P+
Sbjct: 810 LPELWALLNFLLPTIFKSVSTFEQWFNAPFAMTGEKVELNEEETI--LIIRRLHKVLRPF 867
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV + L K E +V ++ QR LY ++L+ DGS
Sbjct: 868 LLRRLKKEV--------ESQLPDKVEYVVKCDMSILQRILYNHMYKKGVLLT--DGSEKD 917
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ + L+KIC+HP M + ++AE L H
Sbjct: 918 KKGKGGTKTLMNTIMQLRKICNHPF----------------MFQHIEESIAEHLGFHGGI 961
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
V D ++ S K + +L KL H VL+F Q ++ ++++ KG+ +L
Sbjct: 962 VTGPDIYR-----ASGKFELLDRILPKLKRNKHRVLMFCQMTSLMTILEDYFNWKGFPYL 1016
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
R+DGTTK+ DR ++++ F D +P +FLL+++ GGLGL L AD V++ D WNP D
Sbjct: 1017 RLDGTTKSEDRGQLLSLFNAKD-SPYFVFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQD 1075
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFK---TATEH 811
Q+ DRA+RIGQ+K+V V RLMT +VEEKI Y+ +++ + G+F T++E
Sbjct: 1076 LQAQDRAHRIGQEKEVRVLRLMTVNSVEEKILAAARYKLNVDEKVIQAGMFNQNSTSSER 1135
Query: 812 K 812
K
Sbjct: 1136 K 1136
>gi|367047285|ref|XP_003654022.1| hypothetical protein THITE_2116567 [Thielavia terrestris NRRL 8126]
gi|347001285|gb|AEO67686.1| hypothetical protein THITE_2116567 [Thielavia terrestris NRRL 8126]
Length = 807
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 181/571 (31%), Positives = 286/571 (50%), Gaps = 74/571 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ K+ +L PHQ EG+++++ C + G I+ D+MGLGKT+Q
Sbjct: 204 PRVPVVIDPKLAKVLRPHQIEGVKFMY--RCVTGMIDEKANGCIMADEMGLGKTLQCITL 261
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
L L I++A+V P +L+ +W ELT L A F K + EL
Sbjct: 262 LWTLLKQSPDAGKTTIQKAIVACPSSLVRNWANELTK-WLGADAITPFAIDGKASKEELT 320
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N + L+ + M+ DEGH
Sbjct: 321 RQLRQWAIASGRAITRPVIIVSYETLRLNVEELKNTPI------------GLMLCDEGHR 368
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN +Q +L + + R+I+SGTPIQN+L E ++L +F P+LLG F++++ELP
Sbjct: 369 LKNGDSQTFNALNSLNVSRRVILSGTPIQNDLSEYFSLISFANPDLLGSRLEFRKRFELP 428
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A + E++ G EL + + +RR N++ S L K E +V
Sbjct: 429 ILRGRDADASEAERKRGDECLAELLAIVNKFIIRR-TNDIL-------SKYLPVKYEHVV 480
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q+ LY F+ S + + G PL A+ ILKK+C+HP LL A L G
Sbjct: 481 FCNLAPFQQALYNYFITSPDIQALLRGKGSQPLKAIGILKKLCNHPDLLDLAAD---LPG 537
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GH 678
+ P+D E + + +I S + +LD+++
Sbjct: 538 CEQYW-PDDYVPKEA--------------RGRDRDIKPWYSGKMQVLDRMLARIRADTND 582
Query: 679 NVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQ 737
+++ S + L+L + S+GY LR+DGT + R K+V+ F + D +FLL+S+
Sbjct: 583 KIVLISNYTQTLDLFERLCRSRGYGCLRLDGTMNVNKRQKLVDKFNDPDGDEFVFLLSSK 642
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++
Sbjct: 643 AGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQR 702
Query: 798 QIFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
Q K L + E + R+FS LREL
Sbjct: 703 QSHKQSLSSCVVDSAEDVERHFSLDSLRELF 733
>gi|254570084|ref|XP_002492152.1| Essential abundant protein involved in regulation of transcription
[Komagataella pastoris GS115]
gi|238031949|emb|CAY69872.1| Essential abundant protein involved in regulation of transcription
[Komagataella pastoris GS115]
gi|328351362|emb|CCA37761.1| TATA-binding protein-associated factor MOT1 [Komagataella pastoris
CBS 7435]
Length = 1937
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 275/545 (50%), Gaps = 60/545 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A + R +
Sbjct: 1318 FELPVSINATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVASDHYLRQEE 1377
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A L+V P +L HW +E I Y G+ + + L+ L D
Sbjct: 1378 FAKSQNANFRKIPSLIVCPPSLTGHWEQEFKQYAAFMTILVYTGS--PSNRSSLRGKLGD 1435
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+YD+ RN+ + L F +Y +LDEGH+IKN +T+ KS+ +
Sbjct: 1436 VDVIITSYDVARNDLEHLVKHDF------------NYCVLDEGHIIKNSNTKLTKSVKKF 1483
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I+SGTPIQNN+ ELW+LF+F P LG K F+EK+ PI + +E+
Sbjct: 1484 RAEHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKIFQEKFAKPIAVSRNSKTSSKEQE 1543
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK +V + L K + +L+ QRQLY F
Sbjct: 1544 AGALALESLHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCQLSDLQRQLYRDF 1595
Query: 582 LNSE---IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGM----DS 626
+ + D + AL ++K+C+HP L+ D DS
Sbjct: 1596 AKKQKGTVEAEVKDANEKKESKQHIFQALQYMRKLCNHPALVVTPKHPQYADVQAYLRDS 1655
Query: 627 MLNPEDAALAEKLA-----MHIADVAEKDDFQEQ--HDNISCKISFILSLLDKLIPEGHN 679
++ D A KL + + D+ E+ ++ + +++ + +I + H
Sbjct: 1656 KMDIRDIRHAPKLVSLKTLLLECGIGSSDENSEEGLGSSLRRQQQQLVTGSEGVISQ-HR 1714
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML++++ + K ++R+DG+T R IV F E + LLT+
Sbjct: 1715 ALIFCQLKDMLDMVENDLLRKHMPSVTYMRLDGSTDPHSRQSIVRKFNEDPSIDLLLLTT 1774
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+VGGLGL LT AD VI V+ WNP D Q++DRA+R+GQKK V VYRL+T T+EE+I
Sbjct: 1775 KVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRLITQNTLEERIMG 1834
Query: 797 KQIFK 801
Q FK
Sbjct: 1835 LQKFK 1839
>gi|345559941|gb|EGX43071.1| hypothetical protein AOL_s00215g680 [Arthrobotrys oligospora ATCC
24927]
Length = 1478
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 259/516 (50%), Gaps = 63/516 (12%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL GIL D+MGLGKT+Q + L + + LV+
Sbjct: 582 VGGKLKDYQLKGLQWMVSLFNNNLNGILADEMGLGKTIQTISLVTHLIEKKNVTGPFLVI 641
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S K Y G + + ++ Q D +LTTY+ +
Sbjct: 642 VPLSTLTNWTLEFEKWAPSIKKIVYKGPPLARKAHQAQVRSGDFQAVLTTYEYI------ 695
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP-SAHRIIISGTPIQNN 477
I D W YMI+DEGH +KN ++ + +L +R+I++GTP+QNN
Sbjct: 696 ------IKDRPVLSKIKWAYMIVDEGHRMKNSESKLSFTLTTYYICRYRLILTGTPLQNN 749
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P G DK L E+ + + + L + ++
Sbjct: 750 LPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDKMELTEEEAL--LIIRRLHKVLR 807
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V A L K E +V + ++ Q +LY S + A +
Sbjct: 808 PFLLRRLKKDV--------EAELPDKVEKVVKCKFSALQAKLYNQMKQSGAIFVASENQK 859
Query: 596 LAALTI---------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
++I L+KIC+HP + EDV ++ ++P LA L A
Sbjct: 860 SGRVSIKGLSNMLMQLRKICNHPFVF-----EDV----ENAISP--GPLANDLLWRTA-- 906
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLR 706
K + LL K GH +L+F Q +++N++++ + +G+KF+R
Sbjct: 907 --------------GKFELLDRLLPKFFAAGHRILMFFQMTQIMNIMEDFLNFRGWKFMR 952
Query: 707 IDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
+DG+TKA DR ++ DF G IFLL+++ GGLGL L AD VI+ D WNP D Q
Sbjct: 953 LDGSTKADDRSVMLKDFNAPGSDYLIFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQ 1012
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
+ DRA+RIGQK +V + RL+T +VEEKI + +K
Sbjct: 1013 AQDRAHRIGQKNEVRILRLITSNSVEEKILSRAQYK 1048
>gi|328709714|ref|XP_001947872.2| PREDICTED: ATP-dependent helicase brm-like [Acyrthosiphon pisum]
Length = 1638
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 266/537 (49%), Gaps = 71/537 (13%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLLS 365
+Q +GL WL SL GIL D+MGLGKT+Q G + L + + L++ P + +S
Sbjct: 808 YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIGLITHLMERKKVNGPFLIIVPLSTMS 867
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W+ E S + Y G+ + R + Q VLLTTY+ V I
Sbjct: 868 NWVLEFEKWSPSVFVVAYKGSPIMRRTLQTQMRSNKFNVLLTTYEYV------------I 915
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKELWAL 484
D++ W YMI+DEGH +KN + + L + HR++++GTP+QN L ELWAL
Sbjct: 916 KDKSVLAKLHWKYMIIDEGHRMKNHHCKLTQVLNTHYNAPHRLLLTGTPLQNKLPELWAL 975
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
NF P + F++ + P +K L+ E+ I + + L + ++P+ LRRLK
Sbjct: 976 LNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI--LIIRRLHKVLRPFLLRRLKK 1033
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--------- 595
EV + L K E IV ++ QR LY+ + ++L+
Sbjct: 1034 EV--------ESQLPDKVEYIVKCDMSGLQRVLYKHMQSKGVLLTDGAEKGKQGKGGAKA 1085
Query: 596 -LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA---DVAEKDD 651
+ + L+K+C+HP + ++ EK HI +V + D
Sbjct: 1086 LMNTIVQLRKLCNHPFMFQ--------------------SIEEKYCEHIGTAGNVVQGPD 1125
Query: 652 FQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTT 711
+S K + +L KL H VL+F Q +++ ++++ +G +G+ +LR+DGTT
Sbjct: 1126 LYR----VSGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLGWRGFAYLRLDGTT 1181
Query: 712 KASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
KA DR ++ F G +FLL+++ GGLGL L AD VI+ D WNP D Q+ DRA
Sbjct: 1182 KAEDRGDLLKKFNSAGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 1241
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQIRYF 818
+RIGQ+ +V V RLMT +VEE+I Y+ +++ + G+F + E+ ++
Sbjct: 1242 HRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFL 1298
>gi|224046507|ref|XP_002200063.1| PREDICTED: DNA repair and recombination protein RAD54B [Taeniopygia
guttata]
Length = 919
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 183/566 (32%), Positives = 283/566 (50%), Gaps = 78/566 (13%)
Query: 300 IGNMLFPHQREGLRWLW----SLHCQGK-GGILGDDMGLGKTMQICGFLAGLFHS----- 349
I N L PHQ+EG+ +L+ + G+ G IL D+MGLGKT+Q + L
Sbjct: 298 IANNLRPHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGKTLQCIALVWTLLRQGPYGC 357
Query: 350 -RLIKRALVVAPKTLLSHWIKELT-----------AVGLSAKIREYFGTCVKTRQYELQY 397
++KRALVV P +L+ +W KE AV K+ E+ + + +
Sbjct: 358 KPVLKRALVVTPGSLVKNWKKEFQKWLGNERIKVFAVDQDHKVEEFISSPLYS------- 410
Query: 398 VLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKS 457
V++ +Y+++ +S + F + +I DEGH +KN + + +
Sbjct: 411 ------VMIISYEMLLRSSDQIEAVEF------------NLLICDEGHRLKNSTIKTTTA 452
Query: 458 LLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALD 517
L + RII++GTPIQN+L+E +AL F P +LG +++ YE PI+R + A +
Sbjct: 453 LTSLSCERRIILTGTPIQNDLQEFYALIEFVNPGILGSLSTYRKIYEEPIVRSREPSATE 512
Query: 518 REKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQL 577
EK +G A EL R+ F+ R EV ++ L K E I++ R T+ Q +L
Sbjct: 513 EEKELGEKRAAEL-TRLTGLFILRRTQEVINK-------FLPPKKESIIFCRPTALQLEL 564
Query: 578 YEAFLNSEIVLSAFDG----SP-LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
Y L S ++ S G SP L + LKK+C+HP LL K E D M + +
Sbjct: 565 YRKLLGSRVITSCLQGRLENSPHLICIGALKKLCNHPCLLFKAIKEKSCDPMSEEYD--E 622
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL--IPEGHNVLIFSQTRKML 690
++L E + D F E S K+ ++ LL + + V++ S + L
Sbjct: 623 SSLYEGVIDVFPQDYTSDTFCETD---SGKLQVLVKLLAAIHELNSSERVVLVSNYTQTL 679
Query: 691 NLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEG-DVAPIFLLTSQVGGLGLTLTKAD 749
N++Q+ GY + R+DG T S R IV+ F A IFLL+S+ GG+GL L A
Sbjct: 680 NVLQDVCKHYGYSYTRLDGHTPVSQRQHIVDTFNSKFSPAFIFLLSSKAGGVGLNLVGAS 739
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL----- 804
+I+ D WNP+TD Q++ R +R GQK V +YRL+T G++EEKIY++QI K L
Sbjct: 740 HLILYDIDWNPATDIQAMARVWRDGQKHSVHIYRLLTTGSIEEKIYQRQISKQDLSGAVV 799
Query: 805 -FKTATEHKEQIRYFSQQDLRELLSL 829
+EH +FS ++L+ L +L
Sbjct: 800 DLSKTSEHT----HFSIEELKNLFTL 821
>gi|67465792|ref|XP_649054.1| helicase [Entamoeba histolytica HM-1:IMSS]
gi|56465406|gb|EAL43665.1| helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709273|gb|EMD48561.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
histolytica KU27]
Length = 837
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 202/635 (31%), Positives = 305/635 (48%), Gaps = 85/635 (13%)
Query: 302 NMLFPHQREGLRWLWSLHCQGK--GGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVA 359
N L PHQR G++WLW H + G ILGDDMGLGKT++I F+ GL ++ + L+V
Sbjct: 101 NQLLPHQRTGIKWLWEHHNETTIHGCILGDDMGLGKTVEILAFVLGLTNNNFSRTFLIVV 160
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
P + W E + R+ + + G+LLTTY++V+N
Sbjct: 161 PAMVALQWQTEAKKWCRPVTLYSIHHMSPSDRRAAISSIQISGGILLTTYNLVQN----- 215
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
DEA WDY+ILDE H IK+ ++ + L + H+I +GTP+ NNL
Sbjct: 216 -------DEASLGVINWDYIILDEAHTIKSRISKASSVLKGFKAKHKIAATGTPMMNNLL 268
Query: 480 ELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK----ELRERI 534
ELW + +F LLGD F+ +E I N L EK S AK EL +RI
Sbjct: 269 ELWNIMDFTTDGALLGDYSQFQSYFERIISNAN----LRNEK---SPFAKRRLLELSKRI 321
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLS----------------------KKNEMIVWLRLTS 572
PY LRR K +VF +D T+S +L+ K E+IVW++L
Sbjct: 322 GPYILRRTKKDVFGDDRPTTSISLNIQEKDEEEGKNSDSSKCLTLTVNKYELIVWVKLDP 381
Query: 573 CQRQLYEAFLNS----EIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVL-DGMDSM 627
QR +Y L S E+ + + + ++ L+K C +P A +DVL D
Sbjct: 382 NQRMIYTKLLRSINVNELKMHKI-RAIIGMISYLEKSCSNP-----PAIKDVLEDQTKPF 435
Query: 628 LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
++ E + ++ +++ C+ + VL+FSQ +
Sbjct: 436 IDNEIIKMVDEETINLWPKLT----VLLKLLKMCEKT------------NEKVLLFSQYQ 479
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
+ L+ I + + SK FLRIDG R + + F + L+T +VG GL +T
Sbjct: 480 RTLDSIADLLQSKDILFLRIDGDLDDGLRKERLRRFNHMSSWGVLLMTIRVGACGLNITG 539
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK---GGL 804
A RV++ D W+ + NQ+VDRAYRIGQKKDVV YR++TCGT+EEK+YR+Q+ K L
Sbjct: 540 ASRVVIFDEGWS-TIGNQAVDRAYRIGQKKDVVSYRIVTCGTLEEKMYRRQVHKTTLTEL 598
Query: 805 FKTATEHKEQIR-YFSQQDLRELLSLPKQGFDVSLTQQQLHEEHG-DQHNMDES---LEA 859
+ K++ R +F++++L L + FD S T + NM E L+
Sbjct: 599 TLETNKEKQKFRHWFTKKELYTLFDSSQVNFDNSKTHLIFKQYKPLYPQNMPEYPDWLDK 658
Query: 860 HIQFLDTL-GIAGVSHHSLLFSKTARVQVVQEEEE 893
H++ ++ L + GVS HS + ++V E E
Sbjct: 659 HVKEIEKLDNVFGVSDHSFIIKTDIPDELVYENIE 693
>gi|444322121|ref|XP_004181716.1| hypothetical protein TBLA_0G02590 [Tetrapisispora blattae CBS 6284]
gi|387514761|emb|CCH62197.1| hypothetical protein TBLA_0G02590 [Tetrapisispora blattae CBS 6284]
Length = 1453
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 270/525 (51%), Gaps = 81/525 (15%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR----A 355
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + LF +K+
Sbjct: 455 VGGTLKEYQLRGLEWMVSLYNNSLNGILADEMGLGKTIQSISLITHLFE---VKKDPGPF 511
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
LV+ P + +++W E S + Y GT + R + D VLLTTY+ +
Sbjct: 512 LVIVPLSTITNWTLEFEKWAPSLRTIIYKGTPNQRRSLQPHIRTGDFDVLLTTYEYI--- 568
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPI 474
I D A W +MI+DEGH +KN ++ + ++ + +R+I++GTP+
Sbjct: 569 ---------IKDRALLAKHDWAHMIIDEGHRMKNAQSKLSYTITHYYRTRNRLILTGTPL 619
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
QNNL ELWAL NF P++ K F E + P + L+ + + + L + +
Sbjct: 620 QNNLPELWALLNFVLPKIFNSAKTFDEWFNTPFANTGGQEKLELTEEETLLIIRRLHKVL 679
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFD 592
+P+ LRRLK EV E D L K E ++ +L+ Q+QLYE L N+ V + +
Sbjct: 680 RPFLLRRLKKEV--EKD------LPDKVEKVIKCKLSGLQQQLYEQMLKHNALFVGAGTE 731
Query: 593 GSPLAAL-------TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
G+ + L+KIC+HP V D ++S++NP
Sbjct: 732 GATKGGIKGLNNKIMQLRKICNHPF---------VFDEVESVINPSKT------------ 770
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKG 701
++N+ ++S LLD+++P+ GH VL+F Q ++++++++ + K
Sbjct: 771 ----------NNNLLFRVSGKFELLDRVLPKLKASGHRVLMFFQMTQVMDIMEDFLRMKQ 820
Query: 702 YKFLRIDGTTKASDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDP 756
+++R+DG+TKA +R +++NDF AP FLL+++ GGLGL L AD VI+ D
Sbjct: 821 LQYMRLDGSTKAEERTEMLNDFN----APNSEYFCFLLSTRAGGLGLNLQTADTVIIFDT 876
Query: 757 AWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
WNP D Q+ DRA+RIGQK +V + RL+T +VEE I + + K
Sbjct: 877 DWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQK 921
>gi|213405783|ref|XP_002173663.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces
japonicus yFS275]
gi|212001710|gb|EEB07370.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces
japonicus yFS275]
Length = 853
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 173/557 (31%), Positives = 293/557 (52%), Gaps = 64/557 (11%)
Query: 299 KIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--- 350
++ +L PHQ EG+++L+ + G I+ D+MGLGKT+Q L L
Sbjct: 267 RLARILRPHQIEGVKFLYKCVTGRIDKVANGCIMADEMGLGKTLQCIALLWTLLKQSPLG 326
Query: 351 ---LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ------- 400
I++A++ P +L+ +W EL + + T+Q ++ +LQ
Sbjct: 327 GKPTIEKAIITCPSSLVKNWANELVKWLGKDAVTPFIVDGKSTKQELIEALLQWAHVRGR 386
Query: 401 --DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL 458
+ VL+ +Y+ +R+ + L+G+ E G ++ DEGH +KN + +L
Sbjct: 387 QITRPVLIVSYETLRSYVEYLKGA-----EVG-------LLLCDEGHRLKNSESLTFTAL 434
Query: 459 LEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDR 518
+ R+I+SGTPIQN+L E ++L NF P LLG + F++ YE+PILRG D ++
Sbjct: 435 NSLDVRRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQDFRKNYEIPILRGRDADGSEK 494
Query: 519 EKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY 578
+K +G A EL + + +RR N++ S L K E +V+ L+ Q LY
Sbjct: 495 DKELGDAKLAELSSIVNRFIIRR-TNDIL-------SKYLPVKYEHVVFCNLSEFQTALY 546
Query: 579 EAFLNSEIVLSAFDGS---PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAAL 635
F+ S + G+ PL A+ ILKK+C+HP LL ED +G + + P+
Sbjct: 547 SYFITSPEIRKILRGAGSQPLKAIGILKKLCNHPDLL--HITED-FEGCEKLF-PQ---- 598
Query: 636 AEKLAMHIADVAEKDDFQEQH--DNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNL 692
V ++ +++H ++S K+ + +L ++ E + +++ S L+L
Sbjct: 599 --------GFVPKEHRGRDRHVDSSLSGKMLVLERMLYRIKKETDDKIVLISNYTSTLDL 650
Query: 693 IQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRV 751
++ ++GYK LR+DGT S R ++V++F + + A +FLL+S+ GG G+ L A+R+
Sbjct: 651 FEQVCRTRGYKALRLDGTMNVSKRQRLVDEFNDPEKDAFVFLLSSKAGGCGINLIGANRL 710
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH 811
I+ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K L +
Sbjct: 711 ILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDE 770
Query: 812 KEQI-RYFSQQDLRELL 827
+ + R+FS +LR+L
Sbjct: 771 AQDVERHFSLDNLRQLF 787
>gi|344228612|gb|EGV60498.1| hypothetical protein CANTEDRAFT_132241 [Candida tenuis ATCC 10573]
Length = 1515
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 282/540 (52%), Gaps = 78/540 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL W+ SL+ GIL D+MGLGKT+Q + L ++ + LV+
Sbjct: 592 VGGTLKEYQVKGLEWMISLYNNHLNGILADEMGLGKTIQTISLITYLVETKRVPGPFLVI 651
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E + K Y GT ++ + + + + +LLTT++ +
Sbjct: 652 VPLSTLTNWNIEFDKWAPTIKKITYKGTPIQRKSLQYEVKTGNFQILLTTFEYI------ 705
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN +++ +++L S HR+I++GTP+QNN
Sbjct: 706 ------IKDRNLLSKIKWIHMIIDEGHRMKNANSKLSETLTHHYHSDHRLILTGTPLQNN 759
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L+ E+ + + + L + ++
Sbjct: 760 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELNEEETL--LIIRRLHKVLR 817
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA-FDGS 594
P+ LRRLK +V E D L K E +V +++S Q +LY+ L I+ ++ +G
Sbjct: 818 PFLLRRLKKDV--EKD------LPNKVEKVVKCKMSSIQSKLYQQMLKHNILYTSDENGE 869
Query: 595 PLA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
P+ + L+KIC+HP V + +++MLNP
Sbjct: 870 PVIIKNANNQIMQLRKICNHPF---------VYEEVENMLNPRS---------------- 904
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
E +D+I +++ LLD+++P+ GH VLIF Q ++++++++ + + ++
Sbjct: 905 -----ETNDDI-WRVAGKFELLDRILPKFKATGHRVLIFFQMTQIMDIMEDFLRLRNLQY 958
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
+R+DG TKA DR +++ F + FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 959 MRLDGGTKADDRTQLLKRFNAPNSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD 1018
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKEQ 814
Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +EQ
Sbjct: 1019 LQAQDRAHRIGQKNEVRILRLITEDSVEEMILERAHAKLEIDGKVIQAGKFDNKSTAEEQ 1078
>gi|167533758|ref|XP_001748558.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773077|gb|EDQ86722.1| predicted protein [Monosiga brevicollis MX1]
Length = 692
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 184/529 (34%), Positives = 264/529 (49%), Gaps = 49/529 (9%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y LP KI L +Q+ G+ W+ L GIL DDMGLGKT+Q F A
Sbjct: 115 YRLPIKIKASLRSYQQAGIDWMNFLRKYQLHGILCDDMGLGKTLQ--AFEATGNPDSQHL 172
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVR 413
+LVV P TL SHW E+ + GT R+ L + + V++ +YD++R
Sbjct: 173 PSLVVCPSTLTSHWYHEIEKFCEGLTPLRFVGTNASARR-ALWTQVPEADVVIVSYDVLR 231
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
N+++ F +Y +LDEGH+I+N S++ ++ + S HR+I+SGTP
Sbjct: 232 NDAEHFAEQRF------------NYCVLDEGHIIRNTSSKVTLAVKGVQSNHRLILSGTP 279
Query: 474 IQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRER 533
IQNN+ ELW+LF+F P LG + F E Y PI A + ++ G+ + L +
Sbjct: 280 IQNNVLELWSLFDFLMPGFLGTQRQFNEAYTKPIRASQGVRATNEQQADGALALEALHRQ 339
Query: 534 IQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI--VLSAF 591
+ P+ LRRLK+EV E L K LT Q LYEA+ S+ + SA
Sbjct: 340 VLPFLLRRLKSEVLTE--------LPPKIIQDYPCELTPVQTHLYEAYSQSQTRSLDSAV 391
Query: 592 DGSP------------LAALTILKKICDHPLLLTKRA---AEDVLDGMDSMLN-PEDAAL 635
D + +L L+K+C+HP L K AE VL + S + P D L
Sbjct: 392 DAASSGHSSKQDSQHVFQSLQFLRKVCNHPALALKSGTALAERVLTEVASAHHQPRDYQL 451
Query: 636 AEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQE 695
+ KL + E + D + + + + + H LIF+Q R L+++QE
Sbjct: 452 SGKLVALRQLLMECEIAGRSGDANADEADLARTAVGR-----HRALIFAQQRAFLDIVQE 506
Query: 696 SIGSKGY---KFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVI 752
+ K + R+DG A R IV +F E + LLT+ VGGLGLTLT AD VI
Sbjct: 507 ELLDKHLPEVTYRRLDGGVPAQQRHDIVVEFNEDPSIDVLLLTTSVGGLGLTLTGADTVI 566
Query: 753 VVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
++ WNP D Q++DRA+R+GQ + V VYRL+T T+EEKI Q FK
Sbjct: 567 FLEHDWNPMKDLQAMDRAHRLGQTRVVNVYRLITQRTLEEKIMSLQRFK 615
>gi|407040251|gb|EKE40036.1| helicase, putative [Entamoeba nuttalli P19]
Length = 837
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 201/635 (31%), Positives = 305/635 (48%), Gaps = 85/635 (13%)
Query: 302 NMLFPHQREGLRWLWSLHCQGK--GGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVA 359
N L PHQR G++WLW H + G ILGDDMGLGKT++I F+ GL ++ + L+V
Sbjct: 101 NQLLPHQRTGIKWLWEHHNETTIHGCILGDDMGLGKTVEILAFVLGLTNNNFSRTFLIVV 160
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
P + W E + R+ + + G+LLTTY++V+N
Sbjct: 161 PAMVALQWQTEAKKWCRPVTLYSIHHMSPSDRRAAISSIQISGGILLTTYNLVQN----- 215
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
DEA WDY+ILDE H IK+ ++ + L + H+I +GTP+ NNL
Sbjct: 216 -------DEASLGVINWDYIILDEAHTIKSRISKASSVLKGFKAKHKIAATGTPMMNNLL 268
Query: 480 ELWALFNFCCP-ELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK----ELRERI 534
ELW + +F LLGD F+ +E I N L EK S AK EL +RI
Sbjct: 269 ELWNIMDFTTDGALLGDYSQFQSYFERIISNAN----LRNEK---SPFAKRRLLELSKRI 321
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLS----------------------KKNEMIVWLRLTS 572
PY LRR K +VF +D T+S +L+ K E+IVW++L
Sbjct: 322 GPYILRRTKKDVFGDDRPTTSISLNIQEKDEEEGKNSDSSKCLTLTVNKYELIVWVKLDP 381
Query: 573 CQRQLYEAFLNS----EIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVL-DGMDSM 627
QR +Y L S E+ + + + ++ L+K C +P A +DVL D
Sbjct: 382 NQRMIYTKLLRSINVNELKMHKI-RAIIGMISYLEKSCSNP-----PAIKDVLEDQTKPF 435
Query: 628 LNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTR 687
++ E + ++ +++ C+ + VL+FSQ +
Sbjct: 436 IDNEIIKMVDEETINLWPKLT----VLLKLLKMCEKT------------NEKVLLFSQYQ 479
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
+ L+ I + + SK FLRIDG R + + F + L+T +VG GL +T
Sbjct: 480 RTLDSISDLLQSKDILFLRIDGDLDDGLRKERLRRFNNMSSWGVLLMTIRVGACGLNITG 539
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK---GGL 804
A RV++ D W+ + NQ+VDRAYRIGQKKDVV YR++TCGT+EEK+YR+Q+ K L
Sbjct: 540 ASRVVIFDEGWS-TIGNQAVDRAYRIGQKKDVVSYRIVTCGTLEEKMYRRQVHKTTLTEL 598
Query: 805 FKTATEHKEQIR-YFSQQDLRELLSLPKQGFDVSLTQQQLHEEHG-DQHNMDES---LEA 859
+ K++ R +F++++L L + FD S T + NM E L+
Sbjct: 599 TLETNKEKQKFRHWFTKKELYTLFDSSQVNFDNSKTHLIFKQYKPLYPQNMPEYPDWLDK 658
Query: 860 HIQFLDTL-GIAGVSHHSLLFSKTARVQVVQEEEE 893
H++ ++ L + GVS HS + +++ E E
Sbjct: 659 HVKEIEKLDNVFGVSDHSFIIKTDIPDELIYENIE 693
>gi|440639556|gb|ELR09475.1| hypothetical protein GMDG_00657 [Geomyces destructans 20631-21]
Length = 1423
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 171/521 (32%), Positives = 280/521 (53%), Gaps = 75/521 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L ++ LV+
Sbjct: 538 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEAKKQNGPFLVI 597
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCV--KTRQYELQYVLQDKGVLLTTYDIVRNNS 416
P + L++W E S K Y G+ + K +Q E++Y VLLTTY+ +
Sbjct: 598 VPLSTLTNWNLEFEKWAPSVKRIVYKGSPLARKEQQQEIRY--GHFQVLLTTYEYI---- 651
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPIQ 475
I D W +MI+DEGH +KN ++ + +L + S +R+I++GTP+Q
Sbjct: 652 --------IKDRPVLSKIKWIHMIIDEGHRMKNAKSKLSGTLSQYYSTRYRLILTGTPLQ 703
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRER 533
NNL ELWAL NF P + K F E + P G DK L E++I V + L +
Sbjct: 704 NNLPELWALLNFVLPTIFKSVKSFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKV 761
Query: 534 IQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFD 592
++P+ LRRLK +V E D L +K+E ++ R ++ Q +LY+ + ++++V+S
Sbjct: 762 LRPFLLRRLKKDV--EKD------LPEKSEKVIKTRFSALQARLYKQMVTHNKLVVSDGK 813
Query: 593 GSPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
G A + L+K+C+HP V D +++ +NP++ +
Sbjct: 814 GGKTGARGLSNMIMQLRKLCNHPF---------VFDEVENQMNPKNTS------------ 852
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
+++ + S LLD+++P+ GH VL+F Q +++++++ + +G
Sbjct: 853 ----------NDLLWRTSGKFELLDRILPKYQRTGHRVLMFFQMTAIMDIMEDFLRLRGI 902
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
+LR+DGTTK+ DR ++ +F D +P +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 903 MYLRLDGTTKSDDRSDLLKEFNRPD-SPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNP 961
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + +K
Sbjct: 962 HQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAKYK 1002
>gi|25013136|gb|AAN71681.1| SD16865p, partial [Drosophila melanogaster]
Length = 673
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 271/545 (49%), Gaps = 65/545 (11%)
Query: 287 LSGPRST--YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
L P+S Y +P I L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LA
Sbjct: 81 LFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILA 140
Query: 345 GLFHSRLIKR-----ALVVAPKTLLSHWIKELTAV---GLSAKIREYFGTCVKTRQYELQ 396
G R +LV+ P TL HW+ E+ G + Y+G V R+
Sbjct: 141 GDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVG-REKLRS 199
Query: 397 YVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+ +++ +YD VR + G F +Y +LDEGH+IKN T+ +K
Sbjct: 200 DIGTKCNLVVASYDTVRKDIDFFSGIHF------------NYCVLDEGHIIKNGKTKSSK 247
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
++ + + HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PIL D +
Sbjct: 248 AIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSS 307
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+E+ G + L ++ P+ LRR+K +V + L K + L+ Q +
Sbjct: 308 AKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKD--------LPPKITQDLLCELSPLQLR 359
Query: 577 LYEAFLNSEI--VLSAFDGSPLA---------------ALTILKKICDHPLLLTKRAAED 619
LYE F N + L S A AL L+ +C+HP L+ +++ E
Sbjct: 360 LYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEE- 418
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
L + S L +++L + H A + + C I + + H
Sbjct: 419 -LTKVTSQLALSNSSLDD--IEHSAKLPALKQLL-----LDCGIGVQTESVSQ-----HR 465
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML+++++ + + +LR+DG+ AS R IVN+F + LLT+
Sbjct: 466 ALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTT 525
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI
Sbjct: 526 MVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMG 585
Query: 797 KQIFK 801
Q FK
Sbjct: 586 LQKFK 590
>gi|281361889|ref|NP_732097.2| helicase 89B [Drosophila melanogaster]
gi|272477008|gb|AAF55260.3| helicase 89B [Drosophila melanogaster]
Length = 1923
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 272/545 (49%), Gaps = 65/545 (11%)
Query: 287 LSGPRS--TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
L P+S Y +P I L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LA
Sbjct: 1331 LFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILA 1390
Query: 345 G-LFHSRLIKRA----LVVAPKTLLSHWIKELTAV---GLSAKIREYFGTCVKTRQYELQ 396
G H + A LV+ P TL HW+ E+ G + Y+G V R+
Sbjct: 1391 GDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVG-REKLRS 1449
Query: 397 YVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+ +++ +YD VR + G F +Y +LDEGH+IKN T+ +K
Sbjct: 1450 DIGTKCNLVVASYDTVRKDIDFFSGIHF------------NYCVLDEGHIIKNGKTKSSK 1497
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
++ + + HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PIL D +
Sbjct: 1498 AIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSS 1557
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+E+ G + L ++ P+ LRR+K +V + L K + L+ Q +
Sbjct: 1558 AKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKD--------LPPKITQDLLCELSPLQLR 1609
Query: 577 LYEAFLNSEI--VLSAFDGSPLA---------------ALTILKKICDHPLLLTKRAAED 619
LYE F N + L S A AL L+ +C+HP L+ +++ E
Sbjct: 1610 LYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEE- 1668
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
L + S L +++L + H A + + C I + + H
Sbjct: 1669 -LTKVTSQLALSNSSLDD--IEHSAKLPALKQLL-----LDCGIGVQTESVSQ-----HR 1715
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML+++++ + + +LR+DG+ AS R IVN+F + LLT+
Sbjct: 1716 ALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTT 1775
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI
Sbjct: 1776 MVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMG 1835
Query: 797 KQIFK 801
Q FK
Sbjct: 1836 LQKFK 1840
>gi|47210118|emb|CAF91684.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1996
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 185/577 (32%), Positives = 276/577 (47%), Gaps = 78/577 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG--LFHSRLIKRA-- 355
IG + ++G+ WL L+ GIL DDMGLGKT+Q LAG +R R+
Sbjct: 1379 IGGQMLVCLQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAREYSRSKA 1438
Query: 356 --------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLT 407
LVV P TL HW+ E+ + T T + LQ+ ++ +++
Sbjct: 1439 PDCCPMPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERMRLQHQVKKHNLVVA 1498
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
+YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++ + RI
Sbjct: 1499 SYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQLAANFRI 1546
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
I+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+ G
Sbjct: 1547 ILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAM 1606
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--- 584
+ L ++ P+ LRR+K +V + L K + L+ Q QLYE F S
Sbjct: 1607 EALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYYCTLSPLQVQLYEDFAKSRAK 1658
Query: 585 ----EIVLSAFDGSP---------------LAALTILKKICDHP-LLLTKRAAEDVLDGM 624
E + SA G AL L+K+C+HP L+LT +
Sbjct: 1659 ASVDESISSASTGEEEEEEEKPKLKATGHVFQALQYLRKLCNHPSLVLTSQ--------- 1709
Query: 625 DSMLNPEDAALAEKLAMH------IADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
+PE + E+LA + + ++ + + + H
Sbjct: 1710 ----HPEYRRITEELAAQSSSLRDVQHAPKLSALKQLLLDCGLGGGGGPEGATEAVVAQH 1765
Query: 679 NVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLT 735
VLIF Q + ML++++ + +LR+DG+ A R IV+ F + LLT
Sbjct: 1766 RVLIFCQLKSMLDIVEHDLLKPKLPSVTYLRLDGSVPAGLRHSIVSRFNNDPSIDVLLLT 1825
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL+T GT+EEKI
Sbjct: 1826 THVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIM 1885
Query: 796 RKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPK 831
Q FK + T ++ ++ + L +L +L K
Sbjct: 1886 GLQKFKMSIANTVISQDNASMQSMGTEQLLDLFTLDK 1922
>gi|307203835|gb|EFN82771.1| DNA repair and recombination protein RAD54-like [Harpegnathos
saltator]
Length = 679
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 177/580 (30%), Positives = 301/580 (51%), Gaps = 106/580 (18%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGK------GGILGDDMGLGKTMQICGFLAGLFHS---- 349
+ N+L PHQREG+++++ GK G I+ D+MGLGKT+Q L L
Sbjct: 82 LCNVLRPHQREGVKFMYEC-VTGKRIEDAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 140
Query: 350 -RLIKRALVVAPKTLLSHWIKEL--------TAVG------------LSAKIREYFGTCV 388
LI +A++VAP +L+ +W E+ +A+ L + ++ Y G CV
Sbjct: 141 KPLIDKAIIVAPSSLVKNWYNEIYKWLNNRVSALAIDGGKKKDIDTKLISFMKTYNGRCV 200
Query: 389 KTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
+L+ +Y+ R ++ L +E G ++ DEGH +K
Sbjct: 201 YP-------------ILIISYETFRLHAHVLH-----QNEVG-------LVLCDEGHRLK 235
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N Q +SL+ + + R+++SGTPIQN+L E ++L +F LLG + F+ K+E PIL
Sbjct: 236 NSENQTYQSLMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKFETPIL 295
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK----KNEM 564
RG D A D E+++ +L + +RR +SA LSK K+E+
Sbjct: 296 RGQDAEATDEERKLAEERLSDLVSVVNKCLIRR------------TSALLSKYLPLKHEL 343
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLSAFDGS----------PLAALTILKKICDHPLLLTK 614
+V +++ Q +LY++F++S+ + + + S LAA+T+LKK+C+HP L+
Sbjct: 344 VVCIKMGELQTRLYKSFIHSDSIKKSMEDSDNSKKGGSLSALAAITLLKKLCNHPDLIYD 403
Query: 615 RAAEDVLDGMD--SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
+ E DG + + L P + + E L ++S K+ + LL
Sbjct: 404 KIKERS-DGFENAARLLPANYSTKELLP-----------------DLSGKLMVLDCLLAS 445
Query: 673 LIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ-EGDVAP 730
+ ++ +++ S + L+L ++ +GY ++R+DGT R K+V++F E
Sbjct: 446 IKTTTNDKIVLVSNYTQTLDLFEKLCHKRGYNYVRLDGTMTIKKRSKVVDNFNSESSSDF 505
Query: 731 IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTV 790
IF+L+S+ GG GL L A+R+++ DP WNP+ D+Q++ R +R GQKK VYR ++ GT+
Sbjct: 506 IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGTI 565
Query: 791 EEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
EEKI+++Q K L T + ++ + R+F+Q DLR+L L
Sbjct: 566 EEKIFQRQAHKKALSSTVVDQEDDVARHFTQTDLRDLFKL 605
>gi|145355576|ref|XP_001422035.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582274|gb|ABP00329.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 589
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 178/562 (31%), Positives = 284/562 (50%), Gaps = 77/562 (13%)
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR 354
MLP G + +Q +G+ W+ SL+ G GIL D MGLGKT+Q GFL+ L ++
Sbjct: 13 MLPLMEGGSMRDYQLKGVNWMISLYQNGLNGILADQMGLGKTVQTIGFLSHLRSKGVLGP 72
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQY------VLQDKGVLLTT 408
LV+ P + LS+W+ E S + Y GT + + +++ + D V++T+
Sbjct: 73 YLVIGPLSTLSNWVSEFQRWTPSIPVLLYHGTRQERAEKRIEFLPTSTPIKPDFPVIVTS 132
Query: 409 YDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRII 468
Y++V + K L +F Y+++DEGH +KN + + L IP+A++++
Sbjct: 133 YEVVMADRKFLAKYNF------------KYLVVDEGHRLKNFDCKLIRELKYIPTANKLL 180
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGND----KHALDR-EKRIG 523
++GTP+QNNL ELW+L +F P++ F+ ++ GND + +D+ E+
Sbjct: 181 LTGTPLQNNLPELWSLLHFLLPDVFSSLSQFQSWFDFADNIGNDESQEQEVVDKNEQEHR 240
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
+ V +L ++P+ LRRLK +V +L +K E++++ ++ Q++ +A +N
Sbjct: 241 ARVVSKLHGILRPFLLRRLKGDV--------ELSLPRKKEILLYAQMVPKQKEFNDALVN 292
Query: 584 SEI--VLSAFDGS---PLA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPED 632
I +L+ F G+ P+ L L+K C+HP L+T LDG S++ P
Sbjct: 293 KTITEMLTKFAGNSHIPVGHTAVNNMLMQLRKNCNHPDLITGG-----LDG--SIMFPSA 345
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNL 692
L E+ K+ + L+ +L GH VLIFSQ +ML+L
Sbjct: 346 DELVEQCG---------------------KMQLLDRLMTRLRARGHKVLIFSQMTRMLDL 384
Query: 693 IQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVI 752
++ +G RIDG+ K DR + + F E IFLL+++ GGLG+ LT D VI
Sbjct: 385 LESFFQQRGEPVCRIDGSVKQDDRREFIARFNEDPKYGIFLLSTRAGGLGINLTGGDTVI 444
Query: 753 VVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT--- 809
+ D WNP D Q++DR +RIGQ K V VYRL T +VE K+ +K K L K
Sbjct: 445 IYDSDWNPHQDLQAMDRVHRIGQTKPVHVYRLATAKSVEGKMLKKAASKLALEKLVVTNG 504
Query: 810 ----EHKEQIRYFSQQDLRELL 827
E + R F +L LL
Sbjct: 505 GFKQEKNDDGRAFGADELMALL 526
>gi|255086381|ref|XP_002509157.1| SNF2 super family [Micromonas sp. RCC299]
gi|226524435|gb|ACO70415.1| SNF2 super family [Micromonas sp. RCC299]
Length = 1814
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 273/540 (50%), Gaps = 73/540 (13%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA--------- 344
+ LP K +L P+Q+EG+ WL L G L DDMGLGKT+Q LA
Sbjct: 1224 FELPFKCNRVLRPYQQEGVNWLAFLRRFKLHGALCDDMGLGKTLQSTCILAATIVERKKA 1283
Query: 345 GLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDK 402
GL H ALVV P TL+ HW E+ +R EY G + +
Sbjct: 1284 GLPHVP----ALVVCPPTLVGHWAHEINQYVAEDVLRPLEYHGQPGDRAKLQPDAFSGKY 1339
Query: 403 GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP 462
V++ +YD +R+++ ++ D + Y ILDEGH I+NP + +++ ++
Sbjct: 1340 DVIIMSYDSLRSDAAAMV-----------DGKSYSYCILDEGHAIRNPKARITQAVKKVR 1388
Query: 463 SAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRI 522
+ HR+++SGTPIQN++ ELW+LF+F P LG + FK+ Y + R
Sbjct: 1389 AEHRLLLSGTPIQNDVVELWSLFDFLMPGFLGTEREFKQSYGIASARSVAAKKGGGLTEQ 1448
Query: 523 GSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF- 581
G+ +L +++ P+ LRR K+EV + L K +++ LT Q+ LY+AF
Sbjct: 1449 GALATGKLHKQVMPFVLRRTKDEVLKD--------LPPKIIQDIYVDLTPHQKHLYDAFE 1500
Query: 582 ---LNSEI--VLSAFDGSP-------LAALTILKKICDHPLLLTKRAAEDVLDGMDSM-- 627
N+EI V+S S AL L+K+C HP L+T+ + +
Sbjct: 1501 GSSANAEITNVISGGGESASGAATHVFQALQYLRKLCSHPRLVTEGDGKKGKKAKPTAET 1560
Query: 628 LNPEDAALAEKL---AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
++P+ AL + L + +AEKD Q+Q + GH VLIFS
Sbjct: 1561 MSPKFMALKQILLDCGIGEDPLAEKDPDQKQESS------------------GHRVLIFS 1602
Query: 685 QTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q + +L+L+++ + KG +LR+DG+ + R +V F + LLT+ VGGL
Sbjct: 1603 QLKSLLDLVEDELFGHLLKGVSWLRLDGSVAPTARFDVVRKFNADPSIDVLLLTTHVGGL 1662
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD V+ ++ WNP D Q++DRA+R+GQK+ V V+RL+T GT+EEKI Q FK
Sbjct: 1663 GLNLTSADTVVFLEHDWNPQKDLQAMDRAHRLGQKRTVNVFRLLTKGTLEEKIMGLQRFK 1722
>gi|332024911|gb|EGI65099.1| DNA repair and recombination protein RAD54-like protein [Acromyrmex
echinatior]
Length = 681
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 176/570 (30%), Positives = 290/570 (50%), Gaps = 87/570 (15%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGK------GGILGDDMGLGKTMQICGFLAGLFHS---- 349
+ N+L PHQREG+++++ GK G I+ D+MGLGKT+Q L L
Sbjct: 85 LCNVLRPHQREGVKFMYEC-VTGKRIENAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 143
Query: 350 -RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQY----------ELQYV 398
LI++A++VAP +L+ +W E I ++ V T +L
Sbjct: 144 KPLIEKAVIVAPSSLVKNWYNE---------INKWLNNMVNTLAIDGGKKADIDTQLIRF 194
Query: 399 LQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL 458
++ G +T I+ + L DE G ++ DEGH +KN Q +SL
Sbjct: 195 MKTYGRCVTPILIISYETFRLHAHVLHQDEVG-------LVLCDEGHRLKNSENQTYQSL 247
Query: 459 LEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDR 518
+ + + R+++SGTPIQN+L E ++L +F LLG + F+ KYE PILRG D A D
Sbjct: 248 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKYETPILRGQDAAATDA 307
Query: 519 EKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK----KNEMIVWLRLTSCQ 574
E+ + +L + +RR +SA LSK K+E++V +++ Q
Sbjct: 308 ERTVAQERLSDLVSIVNKCLIRR------------TSALLSKYLPLKHELVVCIKMGELQ 355
Query: 575 RQLYEAFLNSEIVLSAFDG----------SPLAALTILKKICDHPLLLTKRAAE--DVLD 622
QLY+ F+ S+ + + + S LAA+T+LKK+C+HP L+ + E D L+
Sbjct: 356 TQLYKNFIQSDSIKRSMEENDNPKKTGSLSALAAITLLKKLCNHPDLIYDKIKEKADGLE 415
Query: 623 GMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VL 681
S+L P +A +E +S K+ + LL + ++ ++
Sbjct: 416 KAASLLPPNYSA------------------KELMPELSGKLMVLDCLLASIKTTTNDKIV 457
Query: 682 IFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGG 740
+ S + L+L ++ + Y ++R+DGT R K+V++F IF+L+S+ GG
Sbjct: 458 LVSNYTQTLDLFEKLCHKRSYNYVRLDGTMTIKKRAKVVDNFNSDSSNDFIFMLSSKAGG 517
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
GL L A+R+++ DP WNP+ D+Q++ R +R GQKK VYR ++ GT+EEKI+++Q
Sbjct: 518 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGTIEEKIFQRQAH 577
Query: 801 KGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
K L T + ++ + R+F+ DLR+L L
Sbjct: 578 KKALSSTVVDQEDDVARHFTINDLRDLFKL 607
>gi|224126033|ref|XP_002319739.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222858115|gb|EEE95662.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 2045
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 277/554 (50%), Gaps = 84/554 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA-------GL 346
Y L ++ L +Q+EG+ WL L GIL DDMGLGKT+Q +A L
Sbjct: 1439 YKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDVAEFRAL 1498
Query: 347 FHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYF-GTCVKTRQYE--------LQY 397
+ ++ +L+V P TL+ HW E I +Y + + T QY L+
Sbjct: 1499 NNCEDVQPSLIVCPSTLVGHWAFE---------IEKYIDASLISTLQYSGSAQERICLRE 1549
Query: 398 VLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKS 457
V++T+YD+VR + L S +W+Y ILDEGH+IKN ++ +
Sbjct: 1550 QFLKHNVIITSYDVVRKDIDYLGQS------------LWNYCILDEGHIIKNAKSKITAA 1597
Query: 458 LLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALD 517
+ ++ + HR+I+SGTPIQNN+ +LW+LF+F P LG ++ F+ Y P+L D
Sbjct: 1598 VKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTDRQFQATYGKPLLAARDPKCSA 1657
Query: 518 REKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQ 574
++ G + L +++ P+ LRR K+EV LS E I+ + L+ Q
Sbjct: 1658 KDAEAGVLAMEALHKQVMPFLLRRTKDEV-----------LSDLPEKIIQDRYCDLSPVQ 1706
Query: 575 RQLYEAFLNSEI-----VLSAFD---------GSPLA------ALTILKKICDHPLLLT- 613
+LYE F S + + D SP A AL L K+C HPLL+
Sbjct: 1707 LKLYEQFSGSLVRQEISSMVKLDDSAQPEGNSASPKASTHVFQALQYLLKLCSHPLLVAG 1766
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD--VAEKDDFQEQHDNISCKISFILSLLD 671
++ E ++ + +L P L+E +H + VA ++ +E C I S D
Sbjct: 1767 EKMPESLVCRLHELLPPNCDILSELHKLHHSPKLVALQEILEE------CGIGVDASSSD 1820
Query: 672 KLIPEG-HNVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGD 727
+ G H VLIF+Q + +L++I+ + K +LR+DG+ + R IV F
Sbjct: 1821 NAVSVGQHRVLIFAQHKALLDIIERDLFHSQMKNVTYLRLDGSVEPEKRFDIVKAFNSDP 1880
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
LLT+ VGGLGL LT AD ++ ++ WNP D Q++DRA+R+GQKK V V+RL+
Sbjct: 1881 TIDALLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDLQAMDRAHRLGQKKVVNVHRLIMR 1940
Query: 788 GTVEEKIYRKQIFK 801
GT+EEK+ Q FK
Sbjct: 1941 GTLEEKVMSLQKFK 1954
>gi|406362827|gb|AFS34653.1| SD05972p1 [Drosophila melanogaster]
Length = 1869
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 272/545 (49%), Gaps = 65/545 (11%)
Query: 287 LSGPRS--TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
L P+S Y +P I L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LA
Sbjct: 1277 LFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILA 1336
Query: 345 G-LFHSRLIKRA----LVVAPKTLLSHWIKELTAV---GLSAKIREYFGTCVKTRQYELQ 396
G H + A LV+ P TL HW+ E+ G + Y+G V R+
Sbjct: 1337 GDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVG-REKLRS 1395
Query: 397 YVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+ +++ +YD VR + G F +Y +LDEGH+IKN T+ +K
Sbjct: 1396 DIGTKCNLVVASYDTVRKDIDFFSGIHF------------NYCVLDEGHIIKNGKTKSSK 1443
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
++ + + HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PIL D +
Sbjct: 1444 AIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSS 1503
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+E+ G + L ++ P+ LRR+K +V + L K + L+ Q +
Sbjct: 1504 AKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKD--------LPPKITQDLLCELSPLQLR 1555
Query: 577 LYEAFLNSEI--VLSAFDGSPLA---------------ALTILKKICDHPLLLTKRAAED 619
LYE F N + L S A AL L+ +C+HP L+ +++ E
Sbjct: 1556 LYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEE- 1614
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
L + S L +++L + H A + + C I + + H
Sbjct: 1615 -LTKVTSQLALSNSSLDD--IEHSAKLPALKQLL-----LDCGIGVQTESVSQ-----HR 1661
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML+++++ + + +LR+DG+ AS R IVN+F + LLT+
Sbjct: 1662 ALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTT 1721
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI
Sbjct: 1722 MVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMG 1781
Query: 797 KQIFK 801
Q FK
Sbjct: 1782 LQKFK 1786
>gi|71019185|ref|XP_759823.1| hypothetical protein UM03676.1 [Ustilago maydis 521]
gi|46099621|gb|EAK84854.1| hypothetical protein UM03676.1 [Ustilago maydis 521]
Length = 1060
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 188/619 (30%), Positives = 303/619 (48%), Gaps = 98/619 (15%)
Query: 244 GKLVVNRPDRRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNM 303
G +V+ RPD R + + +V+V+ D ++
Sbjct: 302 GAIVMKRPDERHQRAHNPKRRPVVDVVLD-------------------------PQLTKA 336
Query: 304 LFPHQREGLRWLW----SLHC---QGKGGILGDDMGLGKTMQICGFLAGLFH-------- 348
L PHQ EG+++L+ +H +GKG IL D+MGLGKT+Q + L
Sbjct: 337 LRPHQVEGVKFLYERVMGMHADGTKGKGAILADEMGLGKTLQTIALILTLIKQSCYYTSK 396
Query: 349 SRLIKRALVVAPKTLLSHWIKELTAVGLSAKI----------REYFGTCVKTRQYELQYV 398
S I+RA++V P TL+ +W +E S + RE+ +++ Y + +
Sbjct: 397 SSTIERAMIVCPLTLVKNWKREFRKWIGSNSLNVLCIDEDCGREHVERFARSKAYHVMVI 456
Query: 399 LQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL 458
+K L + DIV+ + D ++ DEGH +K+ Q K
Sbjct: 457 GYEK--LRSCIDIVKTAQPPV-----------------DLIVCDEGHRLKSKDAQTTKMF 497
Query: 459 LEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDR 518
E+ + +II+SGTPIQNNL EL+A+ +F P+LLG + FK +E PILR KHA
Sbjct: 498 DELSTERKIILSGTPIQNNLSELYAMIDFVIPDLLGKPESFKTLFEEPILRSRAKHASKH 557
Query: 519 EKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY 578
K +G A L + LRR + + + L K+EM+++ + Q ++Y
Sbjct: 558 AKAVGQARLGALMTVTKDIILRRTADIL--------TKFLPPKHEMVLFCSPSEEQLRIY 609
Query: 579 EAFLNSEIVLSAFDGSP---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAAL 635
+A L S V S G+P L + +L+K+C+ P LL K D + AL
Sbjct: 610 QAILGSSQVRSLLQGAPGNGLLQIGVLRKLCNSPELLLKDTEADA--------DSPTKAL 661
Query: 636 AEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQ 694
L +F K+ +++LL + + + V++ S L++I+
Sbjct: 662 VGDLTRFFP-----PNFVRNEARFGGKLICVMNLLQTVRAQTDDKVVLVSNFTSTLDIIE 716
Query: 695 ESIGSKGYKFLRIDGTTKASDRVKIVNDF-QEG-DVAPIFLLTSQVGGLGLTLTKADRVI 752
+ K Y +LR+DG T +R+ +VN F +EG D + +FLL+++ GG+GL L A+R++
Sbjct: 717 AMMRKKRYPYLRLDGKTPQDERMAMVNQFNREGVDKSFVFLLSAKSGGVGLNLIGANRLV 776
Query: 753 VVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA--TE 810
++D WNPSTD Q++ R +R GQKK +YRL+ GT++EKIY++QI K GL + E
Sbjct: 777 LIDSDWNPSTDLQAMARIHRDGQKKPCYIYRLLLSGTMDEKIYQRQISKLGLSDSLMNAE 836
Query: 811 HKEQIRYFSQQDLRELLSL 829
K FSQ++LR++ +L
Sbjct: 837 KKTTSDTFSQEELRDIFTL 855
>gi|195328571|ref|XP_002030988.1| GM24274 [Drosophila sechellia]
gi|194119931|gb|EDW41974.1| GM24274 [Drosophila sechellia]
Length = 1923
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 272/545 (49%), Gaps = 65/545 (11%)
Query: 287 LSGPRS--TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
L P+S Y +P I L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LA
Sbjct: 1331 LFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILA 1390
Query: 345 G-LFHSRLIKRA----LVVAPKTLLSHWIKELTAV---GLSAKIREYFGTCVKTRQYELQ 396
G H + A LV+ P TL HW+ E+ G + Y+G V R+
Sbjct: 1391 GDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVG-REKLRS 1449
Query: 397 YVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+ +++ +YD VR + G F +Y +LDEGH+IKN T+ +K
Sbjct: 1450 EIGTKCNLVVASYDTVRKDIDFFSGIHF------------NYCVLDEGHIIKNGKTKSSK 1497
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
++ + + HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PIL D +
Sbjct: 1498 AIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSS 1557
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+E+ G + L ++ P+ LRR+K +V + L K + L+ Q +
Sbjct: 1558 AKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKD--------LPPKITQDLLCELSPLQLR 1609
Query: 577 LYEAFLNSEI--VLSAFDGSPLA---------------ALTILKKICDHPLLLTKRAAED 619
LYE F N + L S A AL L+ +C+HP L+ +++ E
Sbjct: 1610 LYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEE- 1668
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
+ + S L +++L + H A + + C I + + H
Sbjct: 1669 -ITKVTSQLALSNSSLDD--IEHSAKLPALKQLL-----LDCGIGVQTESVSQ-----HR 1715
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML+++++ + + +LR+DG+ AS R IVN+F + LLT+
Sbjct: 1716 ALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTT 1775
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI
Sbjct: 1776 MVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMG 1835
Query: 797 KQIFK 801
Q FK
Sbjct: 1836 LQKFK 1840
>gi|85092588|ref|XP_959470.1| DNA repair and recombination protein RAD54 [Neurospora crassa
OR74A]
gi|28920899|gb|EAA30234.1| DNA repair and recombination protein RAD54 [Neurospora crassa
OR74A]
gi|40804592|emb|CAF05853.1| Rad54 homolog MUS-25 [Neurospora crassa]
Length = 831
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 182/569 (31%), Positives = 289/569 (50%), Gaps = 68/569 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ ++ +L PHQ EG+R+++ C + G I+ D+MGLGKT+Q
Sbjct: 207 PRVPVVIDPRLAKVLRPHQIEGVRFMY--RCVTGMIDEKANGCIMADEMGLGKTLQCITL 264
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
L L I++A+V P +L+ +W EL L A F K + EL
Sbjct: 265 LWTLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVK-WLGADAITPFAIDGKASKEELT 323
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N L+G+ M+ DEGH
Sbjct: 324 RQLRQWAIASGRSVTRPVIIVSYETLRLNVDELKGTPI------------GLMLCDEGHR 371
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN +Q +L + + R+I+SGTPIQN+L E +AL +F P+LLG F++++E+P
Sbjct: 372 LKNGDSQTFSALNSLNVSRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFEIP 431
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A + E++ G EL + + +RR N++ S L K E +V
Sbjct: 432 ILRGRDADASEAERKRGDECLVELLAIVNKFIIRR-TNDIL-------SKYLPVKYEHVV 483
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q LY F+ S + + G PL A+ ILKK+C+HP LL A L G
Sbjct: 484 FCNLAPFQLDLYNYFVASPDIQALLRGKGSQPLKAINILKKLCNHPDLLDLSAD---LPG 540
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLI 682
+ PED ++ A D ++ S K+ + +L ++ + ++ +++
Sbjct: 541 CEQYW-PED---------YVPKEARGRD-RDVKPWYSGKMQVLDRMLARIRADTNDKIVL 589
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQVGG 740
S + L+L + ++ Y LR+DGT + R K+V+ F EGD +FLL+S+ GG
Sbjct: 590 ISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFNDPEGDEF-VFLLSSKAGG 648
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 649 CGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSH 708
Query: 801 KGGLFKTATEHKEQI-RYFSQQDLRELLS 828
K L + E + R+FS LREL +
Sbjct: 709 KQSLSSCVVDSAEDVERHFSLDSLRELFT 737
>gi|336467451|gb|EGO55615.1| hypothetical protein NEUTE1DRAFT_86106 [Neurospora tetrasperma FGSC
2508]
gi|350287905|gb|EGZ69141.1| hypothetical protein NEUTE2DRAFT_115349 [Neurospora tetrasperma
FGSC 2509]
Length = 835
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 182/569 (31%), Positives = 289/569 (50%), Gaps = 68/569 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ ++ +L PHQ EG+R+++ C + G I+ D+MGLGKT+Q
Sbjct: 211 PRVPVVIDPRLAKVLRPHQIEGVRFMY--RCVTGMIDEKANGCIMADEMGLGKTLQCITL 268
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
L L I++A+V P +L+ +W EL L A F K + EL
Sbjct: 269 LWTLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVK-WLGADAITPFAIDGKASKEELT 327
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N L+G+ M+ DEGH
Sbjct: 328 RQLRQWAIASGRSVTRPVIIVSYETLRLNVDELKGTPI------------GLMLCDEGHR 375
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN +Q +L + + R+I+SGTPIQN+L E +AL +F P+LLG F++++E+P
Sbjct: 376 LKNGDSQTFSALNSLNVSRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFEIP 435
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A + E++ G EL + + +RR N++ S L K E +V
Sbjct: 436 ILRGRDADASEAERKRGDECLVELLAIVNKFIIRR-TNDIL-------SKYLPVKYEHVV 487
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q LY F+ S + + G PL A+ ILKK+C+HP LL A L G
Sbjct: 488 FCNLAPFQLDLYNYFVASPDIQALLRGKGSQPLKAINILKKLCNHPDLLDLSAD---LPG 544
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLI 682
+ PED ++ A D ++ S K+ + +L ++ + ++ +++
Sbjct: 545 CEQYW-PED---------YVPKEARGRD-RDVKPWYSGKMQVLDRMLARIRADTNDKIVL 593
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQVGG 740
S + L+L + ++ Y LR+DGT + R K+V+ F EGD +FLL+S+ GG
Sbjct: 594 ISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFNDPEGDEF-VFLLSSKAGG 652
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 653 CGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSH 712
Query: 801 KGGLFKTATEHKEQI-RYFSQQDLRELLS 828
K L + E + R+FS LREL +
Sbjct: 713 KQSLSSCVVDSAEDVERHFSLDSLRELFT 741
>gi|366991587|ref|XP_003675559.1| hypothetical protein NCAS_0C02030 [Naumovozyma castellii CBS 4309]
gi|342301424|emb|CCC69193.1| hypothetical protein NCAS_0C02030 [Naumovozyma castellii CBS 4309]
Length = 1859
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 287/587 (48%), Gaps = 70/587 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
+ LP I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A + R
Sbjct: 1257 FKLPVAIKATLRKYQQDGVNWLAFLNKYRLHGILCDDMGLGKTLQTICIIASDQYLRAED 1316
Query: 352 IKR----------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
K+ +L+V P +L HW E KI Y G + + L+ L
Sbjct: 1317 YKKTNSVETRKLPSLIVCPPSLTGHWENEFEQYAPFLKIIVYAGG--PSMRIPLRDELGS 1374
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ + F +Y +LDEGH+IKN ++ AK++ +I
Sbjct: 1375 ADIVITSYDVARNDLSIITKYDF------------NYCVLDEGHIIKNAQSKLAKAVKQI 1422
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I++GTPIQNN+ ELW+LF+F P LG K F+EK+ PI + +E+
Sbjct: 1423 SANHRLILTGTPIQNNVVELWSLFDFLMPGFLGTEKMFQEKFAKPIAASRNSKTSSKEQE 1482
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L +++ P+ LRRLK +V + L K + L+ Q+QLY+ F
Sbjct: 1483 AGVLALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSDLQKQLYQDF 1534
Query: 582 LNSE--IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSM---- 627
+ +V + + AL ++K+C+HP L+ + D +
Sbjct: 1535 AKKQKNVVEKDIENTTDTDNSQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTG 1594
Query: 628 LNPEDAALAEKL-----AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLI 682
++ D A KL + + E+D ++ + N ++S H LI
Sbjct: 1595 IDLHDVINAPKLNALRTLLFECGIGEEDMERKSNPNQYLTGQNVIS--------QHRALI 1646
Query: 683 FSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
F Q + ML++++ + + ++R+DG+ DR K+V F E LLT++VG
Sbjct: 1647 FCQLKDMLDMVENDLFKRYMPSVTYMRLDGSVDPRDRQKVVRKFNEDPSIDCLLLTTKVG 1706
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
GLGL LT AD VI V+ WNP D Q++DRA+R+GQKK V VYR++T GT+EEKI Q
Sbjct: 1707 GLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRIITKGTLEEKIMGLQK 1766
Query: 800 FKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
FK + T +Q + D +LL L FD Q +EE
Sbjct: 1767 FKMNIASTVV--NQQNSGLASMDTHQLLDL----FDTDDVPSQENEE 1807
>gi|28317220|gb|AAO39617.1| GH12153p, partial [Drosophila melanogaster]
Length = 1221
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 272/545 (49%), Gaps = 65/545 (11%)
Query: 287 LSGPRST--YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
L P+S Y +P I L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LA
Sbjct: 629 LFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILA 688
Query: 345 G-LFHSRLIKRA----LVVAPKTLLSHWIKELTAV---GLSAKIREYFGTCVKTRQYELQ 396
G H + A LV+ P TL HW+ E+ G + Y+G V R+
Sbjct: 689 GDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVG-REKLRS 747
Query: 397 YVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+ +++ +YD VR + G F +Y +LDEGH+IKN T+ +K
Sbjct: 748 DIGTKCNLVVASYDTVRKDIDFFSGIHF------------NYCVLDEGHIIKNGKTKSSK 795
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
++ + + HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PIL D +
Sbjct: 796 AIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSS 855
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+E+ G + L ++ P+ LRR+K +V + L K + L+ Q +
Sbjct: 856 AKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKD--------LPPKITQDLLCELSPLQLR 907
Query: 577 LYEAFLNSEI--VLSAFDGSPLA---------------ALTILKKICDHPLLLTKRAAED 619
LYE F N + L S A AL L+ +C+HP L+ +++ E
Sbjct: 908 LYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEE- 966
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
L + S L +++L + H A + + C I + + H
Sbjct: 967 -LTKVTSQLALSNSSLDD--IEHSAKLPALKQLL-----LDCGIGVQTESVSQ-----HR 1013
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML+++++ + + +LR+DG+ AS R IVN+F + LLT+
Sbjct: 1014 ALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTT 1073
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI
Sbjct: 1074 MVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMG 1133
Query: 797 KQIFK 801
Q FK
Sbjct: 1134 LQKFK 1138
>gi|37699520|gb|AAB95091.3| 89B helicase [Drosophila melanogaster]
Length = 1924
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 272/545 (49%), Gaps = 65/545 (11%)
Query: 287 LSGPRS--TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
L P+S Y +P I L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LA
Sbjct: 1332 LFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILA 1391
Query: 345 G-LFHSRLIKRA----LVVAPKTLLSHWIKELTAV---GLSAKIREYFGTCVKTRQYELQ 396
G H + A LV+ P TL HW+ E+ G + Y+G V R+
Sbjct: 1392 GDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVG-REKLRS 1450
Query: 397 YVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+ +++ +YD VR + G F +Y +LDEGH+IKN T+ +K
Sbjct: 1451 DIGTKCNLVVASYDTVRKDIDFFSGIHF------------NYCVLDEGHIIKNGKTKSSK 1498
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
++ + + HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PIL D +
Sbjct: 1499 AIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSS 1558
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+E+ G + L ++ P+ LRR+K +V + L K + L+ Q +
Sbjct: 1559 AKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKD--------LPPKITQDLLCELSPLQLR 1610
Query: 577 LYEAFLNSEI--VLSAFDGSPLA---------------ALTILKKICDHPLLLTKRAAED 619
LYE F N + L S A AL L+ +C+HP L+ +++ E
Sbjct: 1611 LYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEE- 1669
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
L + S L +++L + H A + + C I + + H
Sbjct: 1670 -LTKVTSQLALSNSSLDD--IEHSAKLPALKQLL-----LDCGIGVQTESVSQ-----HR 1716
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML+++++ + + +LR+DG+ AS R IVN+F + LLT+
Sbjct: 1717 ALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTT 1776
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI
Sbjct: 1777 MVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMG 1836
Query: 797 KQIFK 801
Q FK
Sbjct: 1837 LQKFK 1841
>gi|365987005|ref|XP_003670334.1| hypothetical protein NDAI_0E02740 [Naumovozyma dairenensis CBS 421]
gi|343769104|emb|CCD25091.1| hypothetical protein NDAI_0E02740 [Naumovozyma dairenensis CBS 421]
Length = 1860
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 178/555 (32%), Positives = 279/555 (50%), Gaps = 68/555 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLF----- 347
+ LP I L +Q++G+ WL L+ G GIL DDMGLGKT+Q IC + +
Sbjct: 1256 FKLPVAIKATLRKYQQDGINWLAFLNKYGLHGILCDDMGLGKTLQTICIIASDQYLRQED 1315
Query: 348 ----HSRLIKR--ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
HS ++ +L+V P +L HW E K Y G + + L+ L
Sbjct: 1316 YEKTHSVETRKLPSLIVCPPSLTGHWENEFEQYSPFLKTIVYAGG--PSARIPLRSHLDS 1373
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ RN+ + L G D ++Y +LDEGH+IKN ++ AK++ ++
Sbjct: 1374 ADIVITSYDVARNDLQIL----------GKYD--YNYCVLDEGHIIKNAQSKLAKAVKQL 1421
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1422 RANHRLILTGTPIQNNVVELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQE 1481
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G + L +++ P+ LRRLK +V + L K + L+ Q+QLY+ F
Sbjct: 1482 AGVLALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSDLQKQLYQDF 1533
Query: 582 LNSE--IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDV----------- 620
+ +V+ + + AL ++K+C+HP L+ +
Sbjct: 1534 AKKQKNVVVKDVENTAEVESKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVKSYLKQTG 1593
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
LD D + P+ AL L + E+D ++ N ++S H
Sbjct: 1594 LDLHDLINAPKLNALRNLLFE--CGIGEEDMERKSVPNQYLTGQNVIS--------QHRA 1643
Query: 681 LIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQ 737
LIF Q + ML++++ + K ++R+DG+ DR K+V F E LLT++
Sbjct: 1644 LIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTK 1703
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
VGGLGL LT AD VI ++ WNP D Q++DRA+R+GQKK V VYR++T GT+EEKI
Sbjct: 1704 VGGLGLNLTGADTVIFIEHDWNPMNDLQAMDRAHRLGQKKVVNVYRIITKGTLEEKIMGL 1763
Query: 798 QIFKGGLFKTATEHK 812
Q FK + T +
Sbjct: 1764 QKFKMNIASTVVNQQ 1778
>gi|326917893|ref|XP_003205229.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Meleagris gallopavo]
Length = 918
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 187/555 (33%), Positives = 290/555 (52%), Gaps = 56/555 (10%)
Query: 300 IGNMLFPHQREGLRWLW----SLHCQGK-GGILGDDMGLGKTMQICGFL-----AGLFHS 349
I N L PHQREG+ +L+ + G+ G IL D+MGLGKT+Q + G++
Sbjct: 299 IANNLRPHQREGIVFLYECVMGMRVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGC 358
Query: 350 R-LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTT 408
+ ++KRAL+V P +L+ +W KE S +I+ + T + + E V++ +
Sbjct: 359 KPVLKRALIVTPGSLVKNWKKEFQKWLGSERIKVF--TVDQDHKVEEFISSPLYSVMIIS 416
Query: 409 YDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRII 468
Y+++ LR I D ++ +I DEGH +KN S + +L + RII
Sbjct: 417 YEML------LRSLDQI------QDIEFNLLICDEGHRLKNSSIKTTTALTSLSCERRII 464
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
++GTPIQN+L+E +AL F P +LG +++ YE PI+R + A EK +G A
Sbjct: 465 LTGTPIQNDLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAA 524
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
EL R+ F+ R EV + L K E I++ + T+ Q +LY L+S ++
Sbjct: 525 EL-TRLTGLFVLRRTQEVIDK-------FLPPKKENIIFCQPTALQLELYRKLLSSRVIT 576
Query: 589 SAFDG----SP-LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHI 643
S G SP L + LKK+C+HP LL K E D D + L +
Sbjct: 577 SCLQGRLENSPHLICIGALKKLCNHPCLLFKAVKEKSCDPKS------DEHVESSLYEGL 630
Query: 644 ADVAEKD---DFQEQHDNISCKISFILSLLDKL--IPEGHNVLIFSQTRKMLNLIQESIG 698
DV +D D + D S K+ ++ LL + + V++ S + LN++QE+
Sbjct: 631 TDVFPQDYTSDIFSETD--SGKLQVLVKLLAAIRELSSSERVVLVSNYTQTLNILQETCK 688
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPA 757
GY + R+DG T S R +IV+ F + A IFLL+S+ GG+GL L A +I+ D
Sbjct: 689 RYGYSYTRLDGNTPVSQRQQIVDSFNCKFSPAFIFLLSSKAGGVGLNLVGASHLILYDID 748
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK---GGLFKTATEHKEQ 814
WNP+TD Q++ R +R GQK V +YRL+T G++EEKIY++QI K G ++ E
Sbjct: 749 WNPATDIQAMARVWRDGQKHTVHIYRLLTTGSIEEKIYQRQISKQDLSGAVVDLSKTSEH 808
Query: 815 IRYFSQQDLRELLSL 829
I +FS ++L+ L +L
Sbjct: 809 I-HFSVEELKNLFTL 822
>gi|342320713|gb|EGU12652.1| Mot1 [Rhodotorula glutinis ATCC 204091]
Length = 2019
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 189/551 (34%), Positives = 274/551 (49%), Gaps = 67/551 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
Y +P IG L +QR+G+ WL L G+L DDMGLGKT+Q LA + H R
Sbjct: 1437 YKIPVDIGIELRKYQRDGVSWLAFLARYQLHGLLCDDMGLGKTLQSITILASMHHERAER 1496
Query: 352 --IKRA--------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
RA L++ P TL SHW E+ + + Y G Q + D
Sbjct: 1497 YKATRAPDAVHLPSLIICPPTLTSHWQHEIKTYAKALRPVIYAGPRADREQLVRSFSKYD 1556
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
++ +YD+ RN+ + L A D W Y ILDEGH+IKN T+ K++ +
Sbjct: 1557 --AVIMSYDVARNDVELL---------APID---WHYCILDEGHIIKNGKTKLTKAVKSL 1602
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PI D + +E+
Sbjct: 1603 KAIHRLILSGTPIQNNVLELWSLFDFLMPGFLGSEKAFNDRFGKPIAASRDAKSSSKEQE 1662
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK +V DD L K + L+ Q+QLY+ F
Sbjct: 1663 AGALALEALHKQVLPFILRRLKEDVL--DD------LPPKIIQDYHVELSPLQKQLYDDF 1714
Query: 582 LNSEI-------VLSAFDGSP---LAALTILKKICDHPLLLTK------RAAEDVLDGMD 625
+S+ V S+ P AL L+K+ +HP L+ K +AA + G D
Sbjct: 1715 SHSQAKQLVDGEVKSSSTAKPQHVFQALQYLRKLVNHPALVFKPELPQYQAALAKVAGAD 1774
Query: 626 SMLNPEDAALAEKL-AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
+ + D A A K+ A+ + DN S D+ + + H LIF
Sbjct: 1775 ASIR--DLAHAPKIRALQQVLLDCGIGASSPSDNAS----------DEAVSQ-HRALIFC 1821
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q + ML++++ + K ++R+DG+T S R I F LLT+ VGGL
Sbjct: 1822 QQKMMLDIVENDLLRKLMPSVTYMRLDGSTDVSKRHAICQTFNADPSIDCLLLTTHVGGL 1881
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+R+GQK+ V VYRL+ GT+EEKI Q FK
Sbjct: 1882 GLNLTGADTVIFVEHDWNPMKDLQAMDRAHRLGQKRVVNVYRLIMRGTLEEKIMGLQRFK 1941
Query: 802 GGLFKTATEHK 812
+ T +
Sbjct: 1942 LNIASTVVSQQ 1952
>gi|256083470|ref|XP_002577966.1| helicase [Schistosoma mansoni]
gi|350645091|emb|CCD60217.1| helicase mot1, putative [Schistosoma mansoni]
Length = 2340
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 275/578 (47%), Gaps = 96/578 (16%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH---- 348
+Y LP KI L +Q+EG+ WL L+ G G+L DD+GLGKT+Q LAG H
Sbjct: 1733 SYNLPIKINGTLRTYQQEGVNWLCFLNRYGLNGVLCDDLGLGKTLQTICILAGSHHELKQ 1792
Query: 349 ---------------SRLIKR--------ALVVAPKTLLSHWIKELTAVGLSAKIREY-F 384
S ++ +LV+ P TL +HW E+ + + +
Sbjct: 1793 CLATHNSNKYYVSNESNVMDTKVDGKPPISLVICPSTLCAHWFHEIQHFAQTEDLNPLIY 1852
Query: 385 GTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEG 444
G RQ LQ L V++T+YD+VR SD + W+Y++LDEG
Sbjct: 1853 GGSPSVRQ-NLQSKLHQYDVIITSYDLVR------------SDVGFLELVNWNYIVLDEG 1899
Query: 445 HLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYE 504
H+IK+ ++ +++ + + HR+I++GTPIQN + ELW+LF+F PE LG ++F K+
Sbjct: 1900 HIIKSSKSKVTRAVKHLVAQHRLILTGTPIQNRVTELWSLFDFLMPEFLGTEQYFLAKFA 1959
Query: 505 LPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEM 564
P+ D A +++ G ++L + P+ LRRLK +V + L K
Sbjct: 1960 RPVASSRDPKASKSDQQAGQLALEKLHRLVLPFMLRRLKEDVMQD--------LPPKIIQ 2011
Query: 565 IVWLRLTSCQRQLYEAF-------------------LNSEIVLSAFDGSPLA----ALTI 601
++T QR+LYE+F SE S+F G + AL
Sbjct: 2012 DFACKMTPIQRKLYESFQKTDEGQKVMNFVSTSSGDFYSEYRSSSFGGVSTSHGFHALRY 2071
Query: 602 LKKICDHPLLLTKR--------AAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQ 653
+ +C+HP L+ K E +D M+ + + L + D
Sbjct: 2072 FQAVCNHPCLVLKSNHPLLDEVKQELCIDSMEQLRTVHYSGKLLALCRLLTDCGFGSPNS 2131
Query: 654 EQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL---RIDGT 710
N+ SLL + H LIF QTR+ML L E + K + ++ R+DGT
Sbjct: 2132 INGSNVG-------SLLSQ-----HRALIFFQTREMLQLTGEML-KKQFPWITATRLDGT 2178
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
++R V F + + LLT+ VGGLGL LT AD VI V+ WNPS D Q++DRA
Sbjct: 2179 VPVNERHNRVVKFNQDPSIDLMLLTTAVGGLGLNLTGADTVIFVEHDWNPSKDLQAMDRA 2238
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA 808
+RIGQ++ V VYRL+T ++EE+I Q FK L T
Sbjct: 2239 HRIGQRRTVNVYRLITEDSIEEQIMNLQAFKLHLANTV 2276
>gi|158293531|ref|XP_557901.3| AGAP008748-PA [Anopheles gambiae str. PEST]
gi|157016752|gb|EAL40287.3| AGAP008748-PA [Anopheles gambiae str. PEST]
Length = 789
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 174/564 (30%), Positives = 291/564 (51%), Gaps = 71/564 (12%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKG----GILGDDMGLGKTMQICGFLAGLFHSR----- 350
+GN+L PHQREG+R+++ KG I+ D+MGLGKT+Q L L
Sbjct: 136 LGNILRPHQREGVRFMYDCVTGAKGDFNGCIMADEMGLGKTLQCITLLWTLLRQSPDCKP 195
Query: 351 LIKRALVVAPKTLLSHWIKELTA-VGLSAKIREYFGTCVKTRQYELQYVLQDKG------ 403
I +A++V P +L+ +W KE +G G + EL+ + ++
Sbjct: 196 TINKAIIVCPSSLVKNWYKEFGKWLGCRVNCLSIDGGSKEQTTKELEQYMANQSQRHGTP 255
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
VL+ +Y+ R L S E G ++ DEGH +KN ++L+ + +
Sbjct: 256 VLIISYETFR-----LYAHILNSSEVGA-------VLCDEGHRLKNCENLTYQALMGLKT 303
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
R+++SGTPIQN+L E ++L +F P +LG F++++E PILRG D ++ D E+
Sbjct: 304 KRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSTAEFRKQFENPILRGQDANSTDAEREKA 363
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK----KNEMIVWLRLTSCQRQLYE 579
+ +EL + +RR +SA L+K K EM+V +R+T Q LY+
Sbjct: 364 AERLQELAALVNRCMIRR------------TSALLTKYLPVKFEMVVCVRMTEVQAALYK 411
Query: 580 AFLNSEIV--------LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPE 631
+FL S+ + + + L+ +T LKK+C+HP L+ ++ E DG E
Sbjct: 412 SFLQSDTIRRSVMEKNATKASLTALSNITSLKKLCNHPDLVYEKIQERA-DGF------E 464
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKML 690
+AA + + +E + K+ + +L + + +++ S + L
Sbjct: 465 NAATI---------LPDNYSPRELRPELGAKLMLLDCMLASIKTNTTDKIVLVSNYTQTL 515
Query: 691 NLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKAD 749
+L ++ +GY ++R+DGT R K+V+ F + D A IF+L+S+ GG GL L A+
Sbjct: 516 DLFEKLCRKRGYGYVRLDGTMTIKKRGKVVDQFNQPDSADFIFMLSSKAGGCGLNLIGAN 575
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
R+++ DP WNP+ D Q++ R +R GQKK +YRL+ GT+EEKI+++Q K L T
Sbjct: 576 RLVMFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLATGTIEEKIFQRQTHKKALSTTVV 635
Query: 810 EHKEQ-IRYFSQQDLRELLSLPKQ 832
++ E R+F+Q DL++L L +Q
Sbjct: 636 DNAEDGERHFTQDDLKDLFKLDEQ 659
>gi|162312253|ref|NP_596080.2| TATA-binding protein associated factor Mot1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|81170682|sp|O43065.4|MOT1_SCHPO RecName: Full=Probable helicase mot1; AltName: Full=Modifier of
transcription 1; AltName: Full=TBP-associated factor mot1
gi|157310435|emb|CAA21270.2| TATA-binding protein associated factor Mot1 (predicted)
[Schizosaccharomyces pombe]
Length = 1953
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 182/564 (32%), Positives = 281/564 (49%), Gaps = 80/564 (14%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-- 350
+ +P I L +Q+EG+ WL L+ GIL DDMGLGKT+Q +A ++R
Sbjct: 1347 AFSIPVPISADLRKYQQEGVNWLAFLNKYELHGILCDDMGLGKTLQTICIVASDHYNRQK 1406
Query: 351 LIKRA----------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
L + + L+V P TL HW +EL+ K+ Y G + +++ ++
Sbjct: 1407 LFEESGSPKFAHVPSLIVCPSTLAGHWQQELSTYAPFLKVSAYVGP--PAERAKIRSKMK 1464
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
V++T+YDI RN+ DE D W+Y +LDEGH+IKN + K++
Sbjct: 1465 KSDVVVTSYDICRNDV----------DELVKID--WNYCVLDEGHVIKNARAKLTKAVKS 1512
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ S HR+I+SGTPIQNN+ ELW+LF+F P LG K F+E++ PI D + +E+
Sbjct: 1513 LRSYHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKTFQERFVRPIAASRDAKSSSKER 1572
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + + +++ P+ LRRLK +V A L K + ++ QR+L
Sbjct: 1573 ERGTLALEAIHKQVLPFMLRRLKEDVL--------ADLPPKIIQDYYCDMSDLQRKLLND 1624
Query: 581 FLNSEIVLSAFD-----------------GSPLAALTILKKICDHP-LLLTKRAAEDVLD 622
F++ + + AL ++K+C+HP L+LT++
Sbjct: 1625 FVSQLNINEELEDDETEKTQGTRKKKSQKAHIFQALQYMRKLCNHPALILTEK------- 1677
Query: 623 GMDSMLNPEDAALAEKLA-----MHIADVAEKDDFQEQ------HDNISCKISFILSLLD 671
+P+ A+ ++LA +H A K Q N S + I S L
Sbjct: 1678 ------HPKRNAIVKQLAKENSGLHDLKHAPKLTALGQLLRDCGLGNSSVNSNGIDSALT 1731
Query: 672 KLIPEGHNVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGDV 728
+ E H VLIF Q + ML+++++ + ++R+DG+ + + R + V F
Sbjct: 1732 NAVSE-HRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNNDPS 1790
Query: 729 APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCG 788
+ LLT+ VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T G
Sbjct: 1791 IDVLLLTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRG 1850
Query: 789 TVEEKIYRKQIFKGGLFKTATEHK 812
+EEKI Q FK + T +
Sbjct: 1851 CLEEKIMGLQRFKMNVASTVVNQQ 1874
>gi|422298054|ref|ZP_16385676.1| helicase/SNF2 family domain-containing protein [Pseudomonas
avellanae BPIC 631]
gi|407990372|gb|EKG32471.1| helicase/SNF2 family domain-containing protein [Pseudomonas
avellanae BPIC 631]
Length = 918
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 174/514 (33%), Positives = 260/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 436 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 491
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + ALVV P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 492 LDRPALVVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 547
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 548 LLPRDMEMLEKQPL------------HVLILDEAQYIKNPNSKAAQAARNLTARQRLCLS 595
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I + ++ L L
Sbjct: 596 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRL-----------HHL 644
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 645 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 686
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L H V K
Sbjct: 687 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQ 738
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 739 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 791
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 792 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 848
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 849 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882
>gi|195501119|ref|XP_002097666.1| GE24355 [Drosophila yakuba]
gi|194183767|gb|EDW97378.1| GE24355 [Drosophila yakuba]
Length = 1925
Score = 258 bits (660), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 270/545 (49%), Gaps = 65/545 (11%)
Query: 287 LSGPRS--TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
L P+S Y +P I L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LA
Sbjct: 1333 LFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILA 1392
Query: 345 GLFHSRLIKR-----ALVVAPKTLLSHWIKELTAV---GLSAKIREYFGTCVKTRQYELQ 396
G R +LV+ P TL HW+ E+ G + Y+G V R+
Sbjct: 1393 GDHLHRQTANLSNLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGLPVG-REKLRS 1451
Query: 397 YVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+ +++ +YD VR + G F +Y +LDEGH+IKN T+ +K
Sbjct: 1452 EIGTKCNLVVASYDTVRKDIDFFSGIHF------------NYCVLDEGHIIKNGKTKSSK 1499
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
++ + + HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PIL D +
Sbjct: 1500 AIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSS 1559
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+E+ G + L ++ P+ LRR+K +V + L K + L+ Q +
Sbjct: 1560 AKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKD--------LPPKITQDLLCELSPLQLR 1611
Query: 577 LYEAFLNSEI--VLSAFDGSPLA---------------ALTILKKICDHPLLLTKRAAED 619
LYE F N + L S A AL L+ +C+HP L+ +++ E
Sbjct: 1612 LYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEE- 1670
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
L + S L +++L + H A + + C I + + H
Sbjct: 1671 -LTKVTSQLALSNSSLDD--IEHSAKLPALKQLL-----LDCGIGVQTESVSQ-----HR 1717
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML++++ + + +LR+DG+ AS R IVN+F + LLT+
Sbjct: 1718 ALIFCQLKAMLDIVEHDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTT 1777
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI
Sbjct: 1778 MVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMG 1837
Query: 797 KQIFK 801
Q FK
Sbjct: 1838 LQKFK 1842
>gi|146413212|ref|XP_001482577.1| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 258 bits (660), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 189/612 (30%), Positives = 301/612 (49%), Gaps = 91/612 (14%)
Query: 253 RRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGL 312
++D KS H L +L Y + D + PR + +L PHQ G+
Sbjct: 188 KKDSSRRKSQHRSLAEILGIYKPQTKFADVPVVI--DPR--------LAKVLRPHQVAGV 237
Query: 313 RWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLAGLFH-----SRLIKRALVVAPKT 362
++L+ + + KG I+ D+MGLGKT+Q + L ++ I + ++V P +
Sbjct: 238 KFLYRCTSGLMDPRAKGCIMADEMGLGKTLQCIALMWTLLRQGPRGTKTISKCIIVCPSS 297
Query: 363 LLSHWIKE---------LTAVGLSAKIREYFGTCVKTRQYELQYVLQD----------KG 403
L+ +W E LT + + K T+ +L LQ +
Sbjct: 298 LVRNWANEIVKWLGEGVLTPLAVDGK---------STKSADLGPALQQWSVASGRNIVRP 348
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
VL+ +Y+ +R N L G+ E G M+ DEGH +KN + +L +
Sbjct: 349 VLIISYETLRRNVDKLAGT-----EVG-------LMLADEGHRLKNGDSLTFTALNALRC 396
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
R+I+SGTPIQN+L E ++L NF P LG F++ +E ILRG D A D+EK IG
Sbjct: 397 ERRVILSGTPIQNDLSEYFSLLNFSNPGYLGTRNDFRKNFENAILRGRDADATDKEKEIG 456
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
+L + + + +RR N++ S L K E +V+++L+ Q+ LY+ FL
Sbjct: 457 DQKLSDLSKLVSKFIIRR-TNDIL-------SKYLPIKYEYVVFVKLSPLQKALYKHFLT 508
Query: 584 SEIVLSAFDGS---PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
S V G+ PL A+ +LKK+C HP LL R E+VL D + P+D
Sbjct: 509 SPEVRKLLKGAGSQPLKAIGMLKKLCTHPELL--RLPEEVLGSEDIL--PDDY------- 557
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGS 699
+ + +D +E S K + + L ++ E + +++ S + L+LI+
Sbjct: 558 ----ESSGRD--KEIRTWYSGKFAMLERFLHQIRTETDDKIVLISNYTQTLDLIERMCRY 611
Query: 700 KGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAW 758
K Y+ R+DGT + R K+V+ F + + IFLL+S+ GG G+ L A+R+I++DP W
Sbjct: 612 KRYQCCRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDW 671
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RY 817
NP+ D Q++ R +R GQKKD +YR + GT+EEKI+++Q K L + KE + R
Sbjct: 672 NPAADQQALARVWRDGQKKDCFIYRFILTGTIEEKIFQRQSMKLSLSSCVVDEKEDVDRL 731
Query: 818 FSQQDLRELLSL 829
FS LR+L
Sbjct: 732 FSADLLRQLFQF 743
>gi|320587436|gb|EFW99916.1| DNA repair and recombination protein rad54 [Grosmannia clavigera
kw1407]
Length = 809
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 183/573 (31%), Positives = 287/573 (50%), Gaps = 64/573 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+R+++ + + G I+ D+MGLGKT+Q L
Sbjct: 202 PRVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDAKANGCIMADEMGLGKTLQCITLLW 261
Query: 345 GLFHSRL------IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A+V P +L+ +W EL L A F K + +L
Sbjct: 262 TLLKQSPEAGRPSIQKAIVACPSSLVRNWANELVK-WLGADAITPFAIDGKASKEDLTRQ 320
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + V++ +Y+ +R N + L+ + M+ DEGH +K
Sbjct: 321 LRQWAIASGRAVTRPVIIVSYETLRLNVEELKHTKI------------GLMLCDEGHRLK 368
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + + R+I+SGTPIQN+L E +AL +F P+LLG F+ ++ELPIL
Sbjct: 369 NGDSQTFSALNNLQVSRRVILSGTPIQNDLSEYFALISFANPDLLGSRLEFRRRFELPIL 428
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A E++ G A EL + + +RR N++ S L K E +V+
Sbjct: 429 RGRDADAGPDERKKGDACLAELLAVVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 480
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G +
Sbjct: 481 NLAPFQLDLYNYFITSPDIQALLRGKGSQPLKAINILKKLCNHPDLLN---LADDLPGSE 537
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
P+D ++A A D +E S K+ + +L ++ E ++ +++ S
Sbjct: 538 RCC-PDD---------YVAKEARGRD-REVKPWYSGKMMVLERMLARIRAETNDKIVLIS 586
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGL 743
L+L + ++ Y LR+DGT S R K+V+ F + D + IFLL+S+ GG GL
Sbjct: 587 NYTSTLDLFERLCRNRAYGCLRLDGTMNVSKRQKLVDRFNDPDGSEFIFLLSSKAGGCGL 646
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K
Sbjct: 647 NLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQS 706
Query: 804 LFKT---ATEHKEQIRYFSQQDLRELLSLPKQG 833
L A + R+FS L+EL G
Sbjct: 707 LSTCVVDAAAGDDVERHFSLDSLKELFQFRGAG 739
>gi|312959636|ref|ZP_07774153.1| SNF2-like protein [Pseudomonas fluorescens WH6]
gi|311286353|gb|EFQ64917.1| SNF2-like protein [Pseudomonas fluorescens WH6]
Length = 896
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 252/507 (49%), Gaps = 65/507 (12%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRL 351
T + P + L P+Q EGL W+ SL GGIL DDMGLGKT+Q + L+ R
Sbjct: 414 TCVAPEGLNATLRPYQLEGLSWMQSLRQLDVGGILADDMGLGKTLQTLAHILSEKIAGRQ 473
Query: 352 IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDI 411
+ +VV P +L+ +W+ E + +G K LQ D +LLTTY +
Sbjct: 474 DRPCMVVMPTSLIPNWLDEAAHFTPQLNVLALYGAGRKKHFANLQ----DYDLLLTTYAL 529
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
+ + L +ILDE IKNPS++ A++ E+ + R+ +SG
Sbjct: 530 LPKDIDHLATLPL------------HVLILDEAQYIKNPSSKAAQAARELNARQRLCLSG 577
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
TP++N+L ELW+LF+F P LGD K F Y +PI EKR + L
Sbjct: 578 TPLENHLGELWSLFHFLLPGWLGDVKSFNRDYRVPI-----------EKRASDVRLQHLN 626
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 627 GRIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNEAQRDVYETM---------- 668
Query: 592 DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
L + KK+ D + K A + ++++L +L D
Sbjct: 669 ------RLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLV--------NDA 712
Query: 652 FQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTT 711
+ S K+ +L +LD+L EG +L+FSQ ML+LI+ + +G + + G T
Sbjct: 713 TPPARGSSSGKLDSLLEMLDELFAEGRRILLFSQFTSMLSLIEAELKKRGIAYALLTGQT 772
Query: 712 KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
+ DR V DFQ G + IFL++ + GG+GL LT+AD VI DP WNP+T+NQ+ DRAY
Sbjct: 773 R--DRRTPVKDFQSGKLQ-IFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAY 829
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
RIGQ+K V VY+++ GTVEEKI Q
Sbjct: 830 RIGQEKPVFVYKMIARGTVEEKIQHLQ 856
>gi|389742232|gb|EIM83419.1| hypothetical protein STEHIDRAFT_63110 [Stereum hirsutum FP-91666
SS1]
Length = 1374
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/541 (31%), Positives = 266/541 (49%), Gaps = 71/541 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRALVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + RL LV+
Sbjct: 497 VGGTLKEYQIKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLITFLLETKRLRGPFLVI 556
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S K+ Y G + R + + VLLTTY+ +
Sbjct: 557 VPLSTMTNWSGEFAKWAPSVKVVAYKGNPAQRRALQGDLRVGQFQVLLTTYEYI------ 610
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ A +L S +R+I++GTP+QNN
Sbjct: 611 ------IKDRPVLSKMKWQHMIIDEGHRMKNTRSKLALTLTTYYHSPYRLILTGTPLQNN 664
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGN--DKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P DK L+ E+ + + + L + ++
Sbjct: 665 LPELWALLNFALPKIFNSVKSFDEWFNTPFANSGTPDKIELNEEEAL--LIIRRLHKVLR 722
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E L K E +V +R+++ Q QLY+ +++ S D
Sbjct: 723 PFLLRRLKKDVERE--------LPDKVEKVVKVRMSALQSQLYKQMKKYKMIASGLDNKQ 774
Query: 596 LAA--------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
L L+KIC HP L + ++ LNP + +KL
Sbjct: 775 GYGGVKGLSNELMQLRKICQHPFLF---------ESVEDKLNP-SGLIDDKLIRS----- 819
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRI 707
S KI + +L K +GH VLIF Q ++++++++ + + +K+LR+
Sbjct: 820 ------------SGKIELLNRILPKFFDQGHRVLIFFQMTRVMDIMEDFLKMQNWKYLRL 867
Query: 708 DGTTKASDRVKIVNDFQEGDVA-PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
DG TK +R V F D +F+L+++ GGLGL L AD VI+ D WNP D Q+
Sbjct: 868 DGGTKTEERAAHVTAFNTKDSEIMVFILSTRAGGLGLNLQTADTVIIFDSDWNPHADLQA 927
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKEQIRY 817
DRA+RIGQ K V + R +T +VEE +Y + ++ + G F + +EQ +
Sbjct: 928 QDRAHRIGQTKAVRILRFITEKSVEEAMYSRARYKLDIDDKVIQAGRFDNKSTQEEQEEF 987
Query: 818 F 818
Sbjct: 988 L 988
>gi|317143637|ref|XP_001819595.2| DNA repair protein rhp54 [Aspergillus oryzae RIB40]
Length = 827
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 176/573 (30%), Positives = 281/573 (49%), Gaps = 70/573 (12%)
Query: 288 SGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGF 342
+GPR ++ ++ +L PHQ EG+++L+ G I+ D MGLGKT+Q
Sbjct: 218 TGPRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISL 277
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL- 395
+ L LI++ ++ P +L+ +W EL L F K + EL
Sbjct: 278 MWTLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVK-WLGKDAITPFAVDGKASKTELT 336
Query: 396 ----QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
Q+ + + VL+ +Y+ +R ++L+ S ++ DEGH
Sbjct: 337 SQIKQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPI------------GLLLCDEGHR 384
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN + +L + R+I+SGTPIQN+L E +AL NF P+LLG F++++ELP
Sbjct: 385 LKNKDSLTWTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELP 444
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D D +K+ G EL + + +RR N++ + L K E +V
Sbjct: 445 ILRGRDAAGSDEDKKKGDECLAELSTIVNKFIIRR-TNDIL-------TKYLPVKYEHVV 496
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L+ Q LY F+ S + S G PL A+ +LKK+C+HP LL L G
Sbjct: 497 FCNLSQFQLDLYNHFIQSPEIRSLLRGKGSQPLKAIGLLKKLCNHPDLLNLSTD---LPG 553
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GH 678
+ PED E + + +I S + +LD+++
Sbjct: 554 CEFAF-PEDYVPPEA--------------RGRDRDIKSWYSGKMMVLDRMLARIRQDTND 598
Query: 679 NVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQ 737
+++ S + L+L ++ S+GY LR+DGT + R K+V+ F D +FLL+S+
Sbjct: 599 KIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSK 658
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++
Sbjct: 659 AGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQR 718
Query: 798 QIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
Q K L + E + R+FS + LREL
Sbjct: 719 QSHKQSLSSCVVDSAEDVERHFSLESLRELFQF 751
>gi|339240991|ref|XP_003376421.1| domain protein, SNF2 family [Trichinella spiralis]
gi|316974864|gb|EFV58334.1| domain protein, SNF2 family [Trichinella spiralis]
Length = 1667
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 187/556 (33%), Positives = 278/556 (50%), Gaps = 89/556 (16%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR- 354
LP + L P+Q+EG+ WL L GIL D+MGLGKT+Q L L+ ++ +
Sbjct: 1083 LPSILEGELRPYQKEGVTWLTFLKNYSLHGILSDEMGLGKTLQT---LCILYMAQRMSSN 1139
Query: 355 --------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTC-----VKTRQYEL 395
+L++ PKTL+ HW+ A+ ++FG C V T ++
Sbjct: 1140 NNNNEEKVNSTNNVSLILCPKTLVKHWV---------AEANKFFGHCTADFYVTTLDFDN 1190
Query: 396 QYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRA 455
L+ VL+ +Y+ +R ++ L D W Y ILDEGH+I+N TQ
Sbjct: 1191 VEELEKCNVLVASYESLRRENELLF------------DKHWFYCILDEGHVIRNHKTQLF 1238
Query: 456 KSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHA 515
K+ L+I + HR+I++GTP+QN++ ELW+LF F P LG + F+++Y PI + D A
Sbjct: 1239 KAALQIHAEHRLILTGTPVQNSVGELWSLFEFLMPGYLGTLQQFQQRYLKPICQSRDSKA 1298
Query: 516 LDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQR 575
E G ++L +++ P+ LRR K +V + L K + L+ Q+
Sbjct: 1299 TSAEAHAGKKALEDLHKQVLPFILRRKKVDVCRD--------LPPKIIQDYYCSLSPVQQ 1350
Query: 576 QLYEAFLN--SEIVLSAF------DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSM 627
+LY+A+ + E V SA G + LT L+K+C HPLL+T D M S
Sbjct: 1351 ELYQAYSDEVQEKVASAAVGRESRKGITFSILTYLRKLCSHPLLVTDSEP----DLMQST 1406
Query: 628 LNPEDAALAEKLAMHIADVAEKDD------FQEQHDNIS-CKI-SFILSLLDKLIPEG-- 677
L+ +H+ DV + +D Q +S C I S L+ D + G
Sbjct: 1407 LD----------KLHLNDVQQLNDISYSGKMQALKQLLSECSIGSSNLADCDAVQSNGIS 1456
Query: 678 -HNVLIFSQTRKMLNLI----QESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIF 732
H LIF Q + LNL+ KG FL++DG+ + R ++ F +
Sbjct: 1457 AHRALIFCQYKSALNLLCTFFTRGYFGKGISFLKMDGSVEPERRQELAQQFNSDPSIDLL 1516
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
+LT+Q+GGLGL LT AD VI D WNP D Q++DRA+RIGQ + V VYRL++ GT+EE
Sbjct: 1517 ILTTQIGGLGLNLTGADVVIFFDHDWNPCRDIQAMDRAHRIGQTRTVNVYRLISQGTLEE 1576
Query: 793 KIYRKQIFKGGLFKTA 808
KI R Q FK + T
Sbjct: 1577 KIMRFQKFKNFMADTV 1592
>gi|391867384|gb|EIT76630.1| DNA repair protein, SNF2 family [Aspergillus oryzae 3.042]
Length = 811
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 176/573 (30%), Positives = 281/573 (49%), Gaps = 70/573 (12%)
Query: 288 SGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGF 342
+GPR ++ ++ +L PHQ EG+++L+ G I+ D MGLGKT+Q
Sbjct: 202 TGPRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISL 261
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL- 395
+ L LI++ ++ P +L+ +W EL L F K + EL
Sbjct: 262 MWTLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVK-WLGKDAITPFAVDGKASKTELT 320
Query: 396 ----QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
Q+ + + VL+ +Y+ +R ++L+ S ++ DEGH
Sbjct: 321 SQIKQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPI------------GLLLCDEGHR 368
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN + +L + R+I+SGTPIQN+L E +AL NF P+LLG F++++ELP
Sbjct: 369 LKNKDSLTWTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELP 428
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D D +K+ G EL + + +RR N++ + L K E +V
Sbjct: 429 ILRGRDAAGSDEDKKKGDECLAELSTIVNKFIIRR-TNDIL-------TKYLPVKYEHVV 480
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L+ Q LY F+ S + S G PL A+ +LKK+C+HP LL L G
Sbjct: 481 FCNLSQFQLDLYNHFIQSPEIRSLLRGKGSQPLKAIGLLKKLCNHPDLLNLSTD---LPG 537
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GH 678
+ PED E + + +I S + +LD+++
Sbjct: 538 CEFAF-PEDYVPPEA--------------RGRDRDIKSWYSGKMMVLDRMLARIRQDTND 582
Query: 679 NVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQ 737
+++ S + L+L ++ S+GY LR+DGT + R K+V+ F D +FLL+S+
Sbjct: 583 KIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSK 642
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++
Sbjct: 643 AGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQR 702
Query: 798 QIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
Q K L + E + R+FS + LREL
Sbjct: 703 QSHKQSLSSCVVDSAEDVERHFSLESLRELFQF 735
>gi|83767454|dbj|BAE57593.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 815
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 176/573 (30%), Positives = 281/573 (49%), Gaps = 70/573 (12%)
Query: 288 SGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGF 342
+GPR ++ ++ +L PHQ EG+++L+ G I+ D MGLGKT+Q
Sbjct: 206 TGPRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISL 265
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL- 395
+ L LI++ ++ P +L+ +W EL L F K + EL
Sbjct: 266 MWTLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVK-WLGKDAITPFAVDGKASKTELT 324
Query: 396 ----QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
Q+ + + VL+ +Y+ +R ++L+ S ++ DEGH
Sbjct: 325 SQIKQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPI------------GLLLCDEGHR 372
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN + +L + R+I+SGTPIQN+L E +AL NF P+LLG F++++ELP
Sbjct: 373 LKNKDSLTWTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELP 432
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D D +K+ G EL + + +RR N++ + L K E +V
Sbjct: 433 ILRGRDAAGSDEDKKKGDECLAELSTIVNKFIIRR-TNDIL-------TKYLPVKYEHVV 484
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L+ Q LY F+ S + S G PL A+ +LKK+C+HP LL L G
Sbjct: 485 FCNLSQFQLDLYNHFIQSPEIRSLLRGKGSQPLKAIGLLKKLCNHPDLLNLSTD---LPG 541
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GH 678
+ PED E + + +I S + +LD+++
Sbjct: 542 CEFAF-PEDYVPPEA--------------RGRDRDIKSWYSGKMMVLDRMLARIRQDTND 586
Query: 679 NVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQ 737
+++ S + L+L ++ S+GY LR+DGT + R K+V+ F D +FLL+S+
Sbjct: 587 KIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSK 646
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++
Sbjct: 647 AGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQR 706
Query: 798 QIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
Q K L + E + R+FS + LREL
Sbjct: 707 QSHKQSLSSCVVDSAEDVERHFSLESLRELFQF 739
>gi|149248412|ref|XP_001528593.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Lodderomyces elongisporus NRRL YB-4239]
gi|146448547|gb|EDK42935.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Lodderomyces elongisporus NRRL YB-4239]
Length = 1926
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 280/542 (51%), Gaps = 80/542 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL GIL D+MGLGKT+Q + L + I LV+
Sbjct: 922 VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLITYLIEVKKIPGPFLVI 981
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S K Y GT + + + + + + +LLTT++ +
Sbjct: 982 VPLSTVTNWNLEFEKWAPSVKKITYKGTPNQRKALQHEIRMGNFQILLTTFEYI------ 1035
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLL-EIPSAHRIIISGTPIQNN 477
I D+A W +MI+DEGH +KN +++ +++L S HR+I++GTP+QNN
Sbjct: 1036 ------IKDKALLGRIKWVHMIIDEGHRMKNANSKLSETLTTNYYSDHRLILTGTPLQNN 1089
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L E+ + V + L + ++
Sbjct: 1090 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETL--LVIRRLHKVLR 1147
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E D+ S K E +V ++++ Q +LY+ L ++ S +P
Sbjct: 1148 PFLLRRLKKDV--EKDLPS------KIEKVVKCKMSAVQSRLYQQMLKYNVLYSGDPQNP 1199
Query: 596 LAALTI---------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
A I LKKIC+HP V + +++ +NP
Sbjct: 1200 DVAKPIKNANNQIMQLKKICNHPF---------VYEDVENFINPTS-------------- 1236
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
+++++ +++ LLDK++P+ GH VLIF Q ++++++++ + +
Sbjct: 1237 --------ENNDLIWRVAGKFELLDKVLPKFKQTGHKVLIFFQMTQIMDIMEDFLRLRNL 1288
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
K++R+DG TKA DR +++ F D FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 1289 KYMRLDGGTKADDRTELLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPH 1348
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHK 812
D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +
Sbjct: 1349 QDLQAQDRAHRIGQKNEVRILRLITEDSVEEMILERAHAKLEIDGKVIQAGKFDNKSTAE 1408
Query: 813 EQ 814
EQ
Sbjct: 1409 EQ 1410
>gi|167539947|ref|XP_001741453.1| chromodomain helicase hrp1 [Entamoeba dispar SAW760]
gi|165893990|gb|EDR22091.1| chromodomain helicase hrp1, putative [Entamoeba dispar SAW760]
Length = 1249
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 269/527 (51%), Gaps = 79/527 (14%)
Query: 299 KIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALV 357
K GN L +Q EG WL C+GKG IL D+MGLGKT+Q+ FL L+ +L L+
Sbjct: 297 KHGNTLRSYQLEGHNWLVFNWCRGKGCILADEMGLGKTVQVVSFLEHLYSFQKLQGPFLI 356
Query: 358 VAPKTLLSHWIKE-LTAVGLSAKIREYFGTCVK---TRQYELQYV-LQDK--------GV 404
V P +++ HW +E L ++ I Y G+ + YE Y Q K V
Sbjct: 357 VVPLSMIEHWHREILEWTDMNVVI--YHGSKGNRQLVKHYEWYYKDFQGKLIPGHLKFHV 414
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
LLTTY+IV ISD W ++DE H +KN ++ K+L I +
Sbjct: 415 LLTTYEIV------------ISDWEDLSKISWLVTVVDEAHRLKNKDSKLLKALCNIQTN 462
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
H+++++GTPIQNNL ELW L N+ P+ + F ++ ++LD+ +
Sbjct: 463 HKVLLTGTPIQNNLGELWTLLNYIEPKTFSSLEEFDHEF----------NSLDK----SA 508
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-- 582
+L+E I+P+FLRR+KNEV ++ K E I+ + LT Q+Q Y A
Sbjct: 509 EQVNKLQESIKPFFLRRMKNEV--------EKSIPPKEETIIEVELTMVQKQYYRALYEK 560
Query: 583 NSEIVLSAFDGSPLAAL----TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
N E + GS + L L+K+C+HP L+ ++ D+ PE +
Sbjct: 561 NREFLNKGCVGSNVPNLQNLMMQLRKVCNHPYLIPG------VEEKDTAQFPEGSP---- 610
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
D+ Q S K+ + LL KL + H VLIFSQ +K+LN+I++ +
Sbjct: 611 ------------DYFNQLIRSSGKLVLLDKLLPKLYADHHKVLIFSQLKKVLNIIEKYLK 658
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPA 757
KGY + R+DG+ K+ DR ++ F ++ IFLL ++ GG G+ L++AD VI+ D
Sbjct: 659 YKGYFYERLDGSIKSEDRQNAIDRFMNPEMNRFIFLLCTRAGGFGINLSEADTVIIYDSD 718
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
WNP D Q+ R +RIGQKK+V VYRL++ T E ++ + K GL
Sbjct: 719 WNPQNDLQAQARCHRIGQKKEVKVYRLVSKNTYERYMFERASMKLGL 765
>gi|150865383|ref|XP_001384576.2| transcriptional accessory protein involved in TBP (TATA-binding
protein) regulation helicase MOT1 [Scheffersomyces
stipitis CBS 6054]
gi|149386639|gb|ABN66547.2| transcriptional accessory protein involved in TBP (TATA-binding
protein) regulation helicase MOT1 [Scheffersomyces
stipitis CBS 6054]
Length = 1901
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 195/611 (31%), Positives = 296/611 (48%), Gaps = 103/611 (16%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK-- 353
LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q ++ + R K
Sbjct: 1293 LPVTIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVSSDHYLRSEKFK 1352
Query: 354 ----------RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG 403
LV+ P +L HW +E+ K+ Y G + + L+ + D
Sbjct: 1353 ETQAAEFRKLPTLVICPPSLTGHWEQEINEYAPFLKVLIYAGN--PSIRTPLRSQIPDAD 1410
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
+++T+YD+ RN+ + F++ ++Y +LDEGH+IKN +++ KS+ + +
Sbjct: 1411 IVVTSYDVCRNDVE------FVTSHD------YNYCVLDEGHIIKNAASKLTKSVKRVRA 1458
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
HR+I+SGTPIQNN+ ELW+LF+F P LG K F EK+ PI + +E+ G
Sbjct: 1459 EHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQEAG 1518
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF-- 581
+ + L +++ P+ LRRLK +V + L K + L+ Q++LY+ F
Sbjct: 1519 ALALESLHKQVLPFMLRRLKEDVLSD--------LPPKIVQDYYCELSDLQKKLYKDFAQ 1570
Query: 582 -----LNSEIVLSAFDGSP---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDA 633
+ E+ G+ AL ++K+C+HP L +LNP+
Sbjct: 1571 KQKSTVQEEVSKEGEQGAKQHVFQALQYMRKLCNHPAL---------------VLNPDHP 1615
Query: 634 ALAEKLAMHIADVAEKDDFQE-QHD---------NISCKI----------------SFIL 667
AE + ++A + K D + +H + C I S I
Sbjct: 1616 KYAE-VTQYLA--SRKSDLKSIEHSPKLLSLQALLLECGIGVNDSDYSKSKRKQQQSLIS 1672
Query: 668 SLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQ 724
S + +I E H LIF Q + ML++++ + K ++R+DG+T DR IV F
Sbjct: 1673 S--EGVISE-HRALIFCQLKDMLDIVENELLKKYMPSVTYMRMDGSTDPRDRQGIVRKFN 1729
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
E + LLT++VGGLGL LT AD VI V+ WNP +D Q++DRA+R+GQ K V VYRL
Sbjct: 1730 EDPSIDVLLLTTKVGGLGLNLTGADTVIFVEHDWNPMSDLQAMDRAHRLGQTKVVNVYRL 1789
Query: 785 MTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL-------PKQGFDVS 837
+T T+EEKI Q FK + T +Q S D +LL L KQ DV
Sbjct: 1790 ITKDTLEEKIMGLQKFKINIASTIV--NQQNAGLSSMDTNQLLDLFEVDEKASKQSEDVE 1847
Query: 838 LTQQQLHEEHG 848
Q + E G
Sbjct: 1848 AKQDERGESGG 1858
>gi|410079587|ref|XP_003957374.1| hypothetical protein KAFR_0E00850 [Kazachstania africana CBS 2517]
gi|372463960|emb|CCF58239.1| hypothetical protein KAFR_0E00850 [Kazachstania africana CBS 2517]
Length = 1866
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 185/568 (32%), Positives = 282/568 (49%), Gaps = 62/568 (10%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLF----- 347
+ LP I L +Q+EG+ WL L+ GIL DDMGLGKT+Q IC + +
Sbjct: 1263 FKLPVAIKATLRKYQQEGINWLAFLNKYQLHGILCDDMGLGKTLQTICVIASDQYLRQED 1322
Query: 348 --HSRLIKR----ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+++ ++ +L++ P +L HW E K Y G + + L+ L
Sbjct: 1323 YKNTKSVETRPLPSLIICPPSLTGHWENEFEQYSPFLKTIVYAGG--PSSRIPLRDKLDS 1380
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+YD+ R++ L + +Y +LDEGH+IKN ++ AK++ +I
Sbjct: 1381 ADIVITSYDVTRHDLNVLVKYDY------------NYCVLDEGHIIKNAQSKLAKAVKQI 1428
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1429 HANHRLILTGTPIQNNVVELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQE 1488
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L +++ P+ LRRLK +V + L K + L+ Q+QLYE F
Sbjct: 1489 AGALALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSDLQKQLYEDF 1540
Query: 582 LNSE--IVLSAFDGSPLA---------ALTILKKICDHPLLLTK------RAAEDVLDGM 624
+ +V D + A AL ++K+C+HP L+ R E L
Sbjct: 1541 AKKQKTVVEKDIDNTEEADEGKQHIFQALQYMRKLCNHPALILSPDHPQLRQVEQYLKQA 1600
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
+ L D A KL + E +E D K S L + + H LIF
Sbjct: 1601 N--LELHDVVNAPKLNALRTLLFECGIGEEDMD----KRSESQYLTGQTVISQHRALIFC 1654
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q + ML++++ + K ++R+DG DR K+V F E LLT++VGGL
Sbjct: 1655 QLKDMLDMVENDLFKKYMPSVTYMRLDGGVDPRDRQKVVRRFNEDPSIDCLLLTTKVGGL 1714
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+R+GQKK V VYR++T GT+EEKI Q FK
Sbjct: 1715 GLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRIITKGTLEEKIMGLQKFK 1774
Query: 802 GGLFKTATEHKEQIRYFSQQDLRELLSL 829
+ T +Q + D +LL L
Sbjct: 1775 MNIASTVV--NQQNSGLTSMDTHQLLDL 1800
>gi|344302998|gb|EGW33272.1| hypothetical protein SPAPADRAFT_151123 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1650
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 283/553 (51%), Gaps = 83/553 (15%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL GIL D+MGLGKT+Q + L + I LV+
Sbjct: 754 VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLITYLVEVKKINGPFLVI 813
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S K Y GT + + + + +LLTTY+ +
Sbjct: 814 VPLSTVTNWNLEFEKWAPSVKKITYKGTPNQRKVLQQDIRTGNFQILLTTYEYI------ 867
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNN 477
I D+A W +MI+DEGH +KN S++ +++L S +R+I++GTP+QNN
Sbjct: 868 ------IKDKALLSRIRWVHMIIDEGHRMKNASSKLSETLSHSYHSDYRLILTGTPLQNN 921
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L E+ + V + L + ++
Sbjct: 922 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETL--LVIRRLHKVLR 979
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E D L K E ++ +++S Q +LY+ L I+ +A
Sbjct: 980 PFLLRRLKKDV--EKD------LPNKVEKVIKCKMSSLQSKLYQQMLRLNILYAADPADE 1031
Query: 596 LAALTI---------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
A+TI L+KIC+HP V + +++M+NP+
Sbjct: 1032 NTAVTIKNANNQIMQLRKICNHPF---------VYEEVENMINPK--------------- 1067
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
E +D I +++ LLDK++P+ GH VLIF Q ++++++++ + +
Sbjct: 1068 ------AETNDQI-WRVAGKFELLDKILPKFKKTGHKVLIFFQMTQIMDIMEDFLRFRNM 1120
Query: 703 KFLRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
K++R+DG TKA DR ++ F G FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 1121 KYMRLDGGTKADDRTSLLKLFNAPGSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPH 1180
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLF---KTAT 809
D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F TA
Sbjct: 1181 QDLQAQDRAHRIGQKNEVKILRLITEDSVEEMILERAHAKLEIDGKVIQAGKFDNKSTAE 1240
Query: 810 EHKEQIRYFSQQD 822
E + +R ++D
Sbjct: 1241 EQEAMLRALIEKD 1253
>gi|406866077|gb|EKD19117.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1436
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 273/522 (52%), Gaps = 77/522 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA---- 355
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q L L +K+
Sbjct: 552 VGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLLTYLVE---VKKQNGPF 608
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
LV+ P + L++W E + Y G +Q + Q VLLTTY+ +
Sbjct: 609 LVIVPLSTLTNWNLEFEKWAPALGKVVYKGPPNARKQQQAQLRYGQFQVLLTTYEYI--- 665
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPI 474
I D W +MI+DEGH +KN S++ + +L + + +R+I++GTP+
Sbjct: 666 ---------IKDRPVLSKIKWVHMIIDEGHRMKNASSKLSATLTQYYNTRYRLILTGTPL 716
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRE 532
QNNL ELWAL NF P + K F E + P G DK L E++I V + L +
Sbjct: 717 QNNLPELWALLNFVLPTIFKSVKSFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHK 774
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAF 591
++P+ LRRLK +V E D L K E ++ + +S Q +LY+ + ++++V+S
Sbjct: 775 VLRPFLLRRLKKDV--EKD------LPDKTEKVIKCKFSSLQARLYKQMVTHNKLVVSDG 826
Query: 592 DGSPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
G A + L+K+C+HP V D +++ +NP + +
Sbjct: 827 KGGKTGARGLSNMIMQLRKLCNHPF---------VFDEVENQMNPLNTS----------- 866
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKG 701
+++ + + LLD+++P+ GH VL+F Q +++++++ + +G
Sbjct: 867 -----------NDLLWRTAGKFELLDRILPKYQATGHRVLMFFQMTAIMDIMEDFLRYRG 915
Query: 702 YKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
F+R+DGTTK+ DR ++ +F D +P IFLL+++ GGLGL L AD VI+ D WN
Sbjct: 916 IVFMRLDGTTKSDDRSDLLREFNASD-SPYFIFLLSTRAGGLGLNLQTADTVIIYDSDWN 974
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
P D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 975 PHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAKFK 1016
>gi|393218982|gb|EJD04470.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Fomitiporia mediterranea MF3/22]
Length = 1400
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/546 (30%), Positives = 274/546 (50%), Gaps = 80/546 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L ++ + LV+
Sbjct: 507 VGGTLKEYQLKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLITFLIETKKQRGPFLVI 566
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E + K Y G ++ RQ + + + + VLLTTY+ +
Sbjct: 567 VPLSTMTNWTGEFAKWAPAVKTISYKGNPLQRRQLQNEIRMGNFQVLLTTYEYI------ 620
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D W ++I+DEGH +KN ++ +++L + S +R+I++GTP+QNN
Sbjct: 621 ------IKDRPVLSKLKWLHIIIDEGHRMKNTQSKLSQTLSMYYHSRYRLILTGTPLQNN 674
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRG--NDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P +DK L+ E+ + + + L + ++
Sbjct: 675 LPELWALLNFALPKIFNSVKSFDEWFNTPFANSGSSDKIELNEEEAL--LIIRRLHKVLR 732
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E L K E I+ +R+++ Q QLY+ +++ D
Sbjct: 733 PFLLRRLKKDVESE--------LPDKVEKIIKIRMSALQSQLYKQMKKYKMIADGKDAKG 784
Query: 596 LAA---------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
+ L L+KIC HP L D ++ ++P
Sbjct: 785 KSTGGVKGLSNELMQLRKICQHPFLF---------DSVEDKISPSGMI------------ 823
Query: 647 AEKDDFQEQHDNI---SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYK 703
DNI + K ++ +L K GH VLIF Q K+++++++ + S+G++
Sbjct: 824 ---------DDNIWRVAGKFELLVRVLPKFFATGHRVLIFFQMTKVMDIMEDFMKSQGWQ 874
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAPI--FLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+LR+DG TK +R V F D +PI F+L+++ GGLGL L AD VI+ D WNP
Sbjct: 875 YLRLDGGTKTEERASHVQVFNAKD-SPIQVFILSTRAGGLGLNLQSADTVIIFDSDWNPH 933
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHK 812
D Q+ DRA+RIGQ K V + R +T +VEE +Y + ++ + G F + +
Sbjct: 934 ADLQAQDRAHRIGQTKAVRILRFITEKSVEEAMYARARYKLDIDDKVIQAGRFDNKSTQE 993
Query: 813 EQIRYF 818
EQ +
Sbjct: 994 EQEEFL 999
>gi|340931904|gb|EGS19437.1| DNA repair and recombination protein RAD54-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 838
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 180/570 (31%), Positives = 286/570 (50%), Gaps = 72/570 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ K+ +L PHQ EG+++++ + + G I+ D+MGLGKT+Q L
Sbjct: 235 PRVPVVIDPKLAKVLRPHQIEGVKFMYRCVTGMIDPKANGCIMADEMGLGKTLQCITLLW 294
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYF--GTCVK---TRQY 393
L I++A+V P +L+ +W EL I + G K TRQ
Sbjct: 295 TLLKQSPEAGKPTIEKAIVACPSSLVRNWANELVKWLGKDAINPFTIDGKASKEELTRQL 354
Query: 394 ELQYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
Q+ + + V++ +Y+ +R N ++L+G+ M+ DEGH +K
Sbjct: 355 H-QWAIASGRSVTRPVIIVSYETLRLNVEALKGTPI------------GLMLCDEGHRLK 401
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + + R+I+SGTPIQN+L E ++L +F P+LLG F++++ELPIL
Sbjct: 402 NGDSQTFNALNSLNVSRRVILSGTPIQNDLSEYFSLISFANPDLLGSRAEFRKRFELPIL 461
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A + E++ G EL + + +RR + + S L K E +V+
Sbjct: 462 RGRDADASEAERKRGDECLAELLSIVNKFIIRRTNDLL--------SKYLPVKYEHVVFC 513
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + + G PL A+ ILKK+C+HP D+LD
Sbjct: 514 NLAPFQADLYNYFITSPDIQALLRGKGSQPLKAIGILKKLCNHP---------DLLD--- 561
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
P D E+ D KD D + S + +LD+++ +
Sbjct: 562 ---LPGDLPGCEQ--YFPEDFVPKDARGRDRD-VKSWYSGKMIVLDRMLARIRAETNDKI 615
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQE--GDVAPIFLLTSQV 738
++ S + L+L + S+GY LR+DGT + R ++V+ F + GD +FLL+S+
Sbjct: 616 VLISNYTQTLDLFERLCRSRGYGCLRLDGTMNVNKRQRLVDKFNDPNGDEF-VFLLSSKA 674
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 675 GGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQ 734
Query: 799 IFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 735 SHKQSLSYCVVDSAEDVERHFSLDALRELF 764
>gi|393220591|gb|EJD06077.1| SNF2 chromatin remodeling protein [Fomitiporia mediterranea MF3/22]
Length = 1944
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 189/559 (33%), Positives = 272/559 (48%), Gaps = 87/559 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y LP KI L +Q++G+ WL L GIL DDMGLGKT+Q LA R +
Sbjct: 1338 YNLPVKINAELRKYQQDGVNWLAFLAKYQLHGILCDDMGLGKTLQSICILASKHFERAER 1397
Query: 354 R------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+L+V P TL HW E+ + K Y G+ ++ ++ D
Sbjct: 1398 YNATQSPDSVHLPSLIVCPPTLTGHWYYEILKYTETLKPLMYVGSARDRQRLLSKFPAYD 1457
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++T+Y++VRN+ +L+ + W Y ILDEGH+IKN T+ K++ +I
Sbjct: 1458 --IIITSYEVVRNDIANLQNLN------------WHYCILDEGHVIKNSKTKLTKAVKQI 1503
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG F E++ PIL D + +
Sbjct: 1504 RSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGSEYSFNERFSKPILSNRDGKS--KNDE 1561
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
+ + L +++ P+ LRRLK +V ++ L K + L+ QR LY+ F
Sbjct: 1562 AAALALEALHKQVLPFLLRRLKEDVLND--------LPPKIIQDYYCELSDMQRLLYDEF 1613
Query: 582 LNSEIVLSAFD----------GSP-----LAALTILKKICDHPLLLTK------------ 614
S SA D P +L L+K+ +HP L+ K
Sbjct: 1614 AKSHAADSATDLVQTSNGDVNKGPGQKHVFQSLQYLRKLVNHPALILKDDQESIKAALER 1673
Query: 615 RAAEDVLDGM-DSMLNPEDAALAEKL--------AMHIADVAEKDDFQEQHDNISCKISF 665
A+D ++G+ D P+ AL + L A D K + E D + S
Sbjct: 1674 VQAKDTVEGLRDITHAPKLLALKQILLDCGIGTGAAASVDTTGKSELLETEDTSAGVFS- 1732
Query: 666 ILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVND 722
H VLIF Q ++M+++I+ + + ++R+DG T + R IV
Sbjct: 1733 -----------QHRVLIFCQLKQMIDIIESDLFKRHMPSVTYMRLDGGTDPNKRHAIVQT 1781
Query: 723 FQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVY 782
F LLT+ VGGLGLTLT AD VI V+ WNP D Q++DRA+RIGQKK V VY
Sbjct: 1782 FNADPSIDCLLLTTHVGGLGLTLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVY 1841
Query: 783 RLMTCGTVEEKIYRKQIFK 801
RL+T GT+EEKI Q FK
Sbjct: 1842 RLITKGTLEEKIMGLQRFK 1860
>gi|406603681|emb|CCH44834.1| DNA repair and recombination protein [Wickerhamomyces ciferrii]
Length = 839
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 187/611 (30%), Positives = 311/611 (50%), Gaps = 76/611 (12%)
Query: 250 RPDRRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQR 309
RP +R ++ H L +L + EDEG P ++ K+ +L PHQ
Sbjct: 204 RPSKR-----RNVHKSLNEILGITKNP---EDEGK---KFPDVPVIIDPKLTKILRPHQV 252
Query: 310 EGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVA 359
EG+++L+ + + KG I+ D+MGLGKT+Q + L + I + +VV
Sbjct: 253 EGVKFLYRCVSGLVDPRAKGCIMADEMGLGKTLQCIALMWTLLKQGPRGKKTIDKCIVVC 312
Query: 360 PKTLLSHWIKELTAV------------GLSAKIREYFGTCVKTRQYELQYVLQDKGVLLT 407
P +L+ +W ELT G S K E + + + + V+ + VL+
Sbjct: 313 PSSLVRNWANELTKWLGEGAPTPLAIDGKSTKPNEVGSSIQQWSLAKGRNVV--RPVLII 370
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
+Y+ +R N ++L+ + E G ++ DEGH +KN + SL + R+
Sbjct: 371 SYETLRRNVENLKNT-----EIG-------LLLADEGHRLKNGDSLTFTSLDSLNCKRRV 418
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
I+SGTPIQN+L E +AL NF P LLG F++ +E+PIL+G D A D+E G
Sbjct: 419 ILSGTPIQNDLSEYFALLNFANPGLLGTRIEFRKNFEIPILKGRDADATDKEVEDGQKKL 478
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--- 584
L + + +RR N++ S L K E ++++ L+ Q +LY F+ S
Sbjct: 479 GMLSTIVSKFIIRR-TNDIL-------SKYLPCKYEHVIFVNLSPMQEKLYHHFITSPDI 530
Query: 585 EIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA 644
+ +L PL A+ +LKK+C+HP L+ ++ +G D ++ P+D +I
Sbjct: 531 KKLLKGVGSQPLKAIGLLKKLCNHPDLIN---LDEDFEGSDHLI-PDD---------YIN 577
Query: 645 DVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYK 703
+ +E S K S + L K+ E ++ +++ S + L+LI++ Y
Sbjct: 578 SITGGGRNREVQTWQSGKFSILERFLAKIKKESNDKIVLISNYTQTLDLIEKMCRHNHYG 637
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
LR+DGT + R K+V+ F + + +P IFLL+S+ GG G+ L A+R+I++DP WNP+
Sbjct: 638 NLRLDGTMNINKRQKLVDRFNDPE-SPEFIFLLSSKAGGCGINLIGANRLILIDPDWNPA 696
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQ 820
+D Q++ R +R GQKKD +YR +T G++EEKI+++Q K L + + + R FS
Sbjct: 697 SDQQALARVWRDGQKKDCFIYRFITTGSIEEKIFQRQSMKMSLSSCVVDENQDVERLFST 756
Query: 821 QDLRELLSLPK 831
+LR+L K
Sbjct: 757 DNLRQLFQFNK 767
>gi|156375431|ref|XP_001630084.1| predicted protein [Nematostella vectensis]
gi|156217098|gb|EDO38021.1| predicted protein [Nematostella vectensis]
Length = 1872
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 287/582 (49%), Gaps = 71/582 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y + I L +Q++G+ WL L GIL DDMGLGKT+Q +A H +L K
Sbjct: 1272 YTISIPIKAELRKYQQDGVNWLAFLSKYKLHGILCDDMGLGKTLQSICIMASDHHYKLQK 1331
Query: 354 R------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+LV+ P TL HW+ E+ + ++ T + L+ +++
Sbjct: 1332 YKETGHADCKPLPSLVICPPTLTGHWVYEVEKFVIKEYLKPLHYTGPPMERQRLRNKVKN 1391
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YDIVRN+ G F S W+Y ILDEGH+IKN T+ A+ + ++
Sbjct: 1392 HNLIVASYDIVRND-----GDFFKSIH-------WNYCILDEGHIIKNGKTKLARVIKQL 1439
Query: 462 PSAHRIIISGTPIQNNLKELWALFN--FCCPELLGDNKWFKEKYELPILRGNDKHALDRE 519
+ HR+I+SGTPIQNN+ ELW+L + + P +L +N F+E ++ +++ D + +E
Sbjct: 1440 RANHRLILSGTPIQNNVLELWSLLHSFYWIPFILYNNTHFQENIDMCLIQSRDAKSSSKE 1499
Query: 520 KRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYE 579
+ G+ + L ++ P+ LRRLK +V + L K + L+ Q QLYE
Sbjct: 1500 QEAGALAMESLHRQVLPFLLRRLKEDVLQD--------LPPKIIQDYYCELSPLQVQLYE 1551
Query: 580 AFLNSEIV-----------------LSAFDGSP--LAALTILKKICDHPLL-LTKRAAED 619
F S+ +++ GS AL L+K+C+HPLL LT + E
Sbjct: 1552 DFAKSQAKKGLEESFSLSEDADDKEMASKKGSAHIFQALQYLRKVCNHPLLVLTPQHPEH 1611
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-- 677
D + L +L + H A + + C I S L E
Sbjct: 1612 --DKIMQQLKETRQSLKD--IHHAAKLVALKQLL-----LDCGIGVSTSSTSDLASEPVV 1662
Query: 678 --HNVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIF 732
H VL+F Q + ML++++ + +LR+DG+T A R IV+ F +
Sbjct: 1663 SQHRVLLFCQLKSMLDIVENDLFKTNMPSVTYLRLDGSTPAGSRHSIVHRFNNDPSIDVL 1722
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LLT+ VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT+EE
Sbjct: 1723 LLTTHVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLVTKGTLEE 1782
Query: 793 KIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
KI Q FK + T ++ + L +L ++ K+G
Sbjct: 1783 KIMGLQKFKMTIANTVISQDNSSLSTMDTGQLFDLFTVDKEG 1824
>gi|380493077|emb|CCF34140.1| DNA repair protein rhp54 [Colletotrichum higginsianum]
Length = 806
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 282/569 (49%), Gaps = 70/569 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++++ + + G I+ D+MGLGKT+Q L
Sbjct: 203 PRVPVVIDPRLAKVLRPHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLW 262
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A+V P +L+ +W EL L A F K + EL
Sbjct: 263 TLLKQSPEAGKGTIQKAIVACPSSLVRNWANELVK-WLGADAITPFAIDGKASKEELTRQ 321
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + V++ +Y+ +R N + L+ + M+ DEGH +K
Sbjct: 322 LRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI------------GLMLCDEGHRLK 369
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + R+I+SGTPIQN+L E ++L +F P+LLG F++++ELPIL
Sbjct: 370 NGDSQTFSALNNLNVTRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLDFRKRFELPIL 429
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A + E++ G EL + + +RR N++ S L K E +V+
Sbjct: 430 RGRDADAAEAERKKGDECLSELLGIVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 481
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + + G PL A+ ILKK+C+HP D+L+ D
Sbjct: 482 NLAPFQLDLYNYFITSPEIQALLRGKGSQPLKAINILKKLCNHP---------DLLNIAD 532
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
+ ED + D K+ D + S + +LD+++ +
Sbjct: 533 DLPGSEDC--------YPDDYVPKEARGRDRD-VKPWYSGKMQVLDRMLARIRQDTNDKI 583
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
++ S + L+L ++ S+ Y LR+DGT + R K+V+ F D +FLL+S+ G
Sbjct: 584 VLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSKAG 643
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 644 GCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQS 703
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 704 HKQSLSSCVVDSAEDVERHFSLDSLRELF 732
>gi|453083597|gb|EMF11642.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 1439
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 171/518 (33%), Positives = 267/518 (51%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRALVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L R LV+
Sbjct: 565 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKRQHGPYLVI 624
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G + + ++ Q + VLLTTY+ +
Sbjct: 625 VPLSTLTNWNSEFERWAPSVNRIVYKGPPAQRKNFQQQIRYGNFQVLLTTYEFI------ 678
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + ++ + + +RII++GTP+QNN
Sbjct: 679 ------IKDRPILSKIKWLHMIVDEGHRMKNAQSKLSSTISQYYHTRYRIILTGTPLQNN 732
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWA+ NF P + K F E + P G DK L E+ I V + L + ++
Sbjct: 733 LTELWAMLNFVLPNIFKSAKSFDEWFNTPFANTGGGDKMELTEEESI--LVIRRLHKVLR 790
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY-EAFLNSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ L++ Q +LY + L++ I + DG
Sbjct: 791 PFLLRRLKKDV--EKD------LPDKQERVIKCNLSALQAKLYKQLMLHNRINVIGADGK 842
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP + E+V D M NP
Sbjct: 843 KTGMRGLSNMLMQLRKLCNHPFVF-----EEVEDQM----NP------------------ 875
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
Q+ +++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 876 ----QKMTNDLIWRTAGKFELLDRVLPKFKATGHRVLLFFQMTQIMNIMEDFLRFRGIKY 931
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TKA DR +++ F D FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 932 LRLDGSTKADDRSELLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD 991
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL+T +VEEKI + +K
Sbjct: 992 LQAQDRAHRIGQKNEVRILRLITSNSVEEKILERAQYK 1029
>gi|422647798|ref|ZP_16710925.1| helicase/SNF2 family domain-containing protein [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330961339|gb|EGH61599.1| helicase/SNF2 family domain-containing protein [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 885
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 176/514 (34%), Positives = 262/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 403 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 458
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 459 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 514
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 515 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 562
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 563 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 611
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 612 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 653
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L H V K
Sbjct: 654 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQ 705
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 706 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 758
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 759 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 815
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 816 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 849
>gi|380012939|ref|XP_003690530.1| PREDICTED: TATA-binding protein-associated factor 172 [Apis florea]
Length = 1899
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 274/555 (49%), Gaps = 73/555 (13%)
Query: 287 LSGPRST--YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
L PRS LP + L +QR+GL WL L+ G+L DDMGLGKT+Q LA
Sbjct: 1291 LLNPRSIPDTELPILVAAELRSYQRQGLNWLNFLNRYQLHGVLCDDMGLGKTLQTLCILA 1350
Query: 345 GLFHSR--LIKRALVVAPKTLLSHWIKELTAVGLSA--KIREYFGTCVKTRQYELQYVLQ 400
L H R +LVV P TL HW+ E + + +Y GT + +L+ +
Sbjct: 1351 -LDHHRNPHAPPSLVVCPPTLTGHWVYEAEKFFETKDLSVLQYAGT--PPEREKLRPRVT 1407
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++ +YDIVR + W+Y +LDEGH+IKN T+ AK+
Sbjct: 1408 YHRLVVASYDIVRKDIDYFETRQ------------WNYCVLDEGHVIKNGKTKSAKATKR 1455
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ + HR+I+SGTP+QN++ ELW+LF+F P LG K F KY PIL + A +E+
Sbjct: 1456 LHANHRLILSGTPVQNDVLELWSLFDFLMPGFLGTEKQFAAKYSRPILACREPKAGPKEQ 1515
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L ++ P+ LRR K +V + L K + L+S QR LYE
Sbjct: 1516 EAGALAMEALHRQVLPFLLRRNKEDVLQD--------LPPKITQDYYCDLSSLQRMLYED 1567
Query: 581 F--LNSEIVLSAFD----------GSPLAALTILKKICDHP-LLLTKRAAEDVLDGMDSM 627
F +S +LS+ G AL L+ +C+HP L+L +R + + +
Sbjct: 1568 FRTRHSATLLSSTSCTSTGNDSHGGHVFEALRYLRNVCNHPKLVLNQR--HPLYTSICNT 1625
Query: 628 LNPEDAALAE--------KLAMHIADVAEKDDFQEQH----------DNISCKISFILSL 669
L + + LAE L + D Q+Q DN + ++S
Sbjct: 1626 LKQQKSTLAEIEHGAKLPALKQLLLDCGIGQPQQQQSRNSVSAGSTPDNQPPQQQQLVS- 1684
Query: 670 LDKLIPEGHNVLIFSQTRKMLNLIQES---IGSKGYKFLRIDGTTKASDRVKIVNDFQEG 726
H LIF Q + ML+++++ I +LR+DG+ A+ R +V F
Sbjct: 1685 -------QHRALIFCQLKAMLDIVEKDLLRIHLPTVTYLRLDGSVPAAQRHSVVARFNAD 1737
Query: 727 DVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMT 786
+ LLT+QVGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T
Sbjct: 1738 PSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLIT 1797
Query: 787 CGTVEEKIYRKQIFK 801
TVEEKI Q FK
Sbjct: 1798 RSTVEEKIMGLQKFK 1812
>gi|195570490|ref|XP_002103240.1| GD19063 [Drosophila simulans]
gi|194199167|gb|EDX12743.1| GD19063 [Drosophila simulans]
Length = 1403
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 272/545 (49%), Gaps = 65/545 (11%)
Query: 287 LSGPRST--YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
L P+S Y +P I L +Q+ G+ WLW L+ GIL DDMGLGKT+Q LA
Sbjct: 811 LFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILA 870
Query: 345 G-LFHSRLIKRA----LVVAPKTLLSHWIKELTAV---GLSAKIREYFGTCVKTRQYELQ 396
G H + A LV+ P TL HW+ E+ G + Y+G V R+
Sbjct: 871 GDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVG-REKLRS 929
Query: 397 YVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+ +++ +YD VR + G F +Y +LDEGH+IKN T+ +K
Sbjct: 930 EIGTKCNLVVASYDTVRKDIDFFSGIHF------------NYCVLDEGHIIKNGKTKSSK 977
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
++ + + HR+I+SGTPIQNN+ ELW+LF+F P LG K F +++ PIL D +
Sbjct: 978 AIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSS 1037
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+E+ G + L ++ P+ LRR+K +V + L K + L+ Q +
Sbjct: 1038 AKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKD--------LPPKITQDLLCELSPLQLR 1089
Query: 577 LYEAFLNSEI--VLSAFDGSPLA---------------ALTILKKICDHPLLLTKRAAED 619
LYE F N + L S A AL L+ +C+HP L+ +++ E
Sbjct: 1090 LYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEE- 1148
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
L + S L +++L + H A + + C I + + H
Sbjct: 1149 -LTKVTSQLALTNSSLDD--IEHSAKLPALKQLL-----LDCGIGVQTESVSQ-----HR 1195
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML+++++ + + +LR+DG+ AS R IVN+F + LLT+
Sbjct: 1196 ALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTT 1255
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T ++EEKI
Sbjct: 1256 MVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMG 1315
Query: 797 KQIFK 801
Q FK
Sbjct: 1316 LQKFK 1320
>gi|325277313|ref|ZP_08142939.1| non-specific serine/threonine protein kinase [Pseudomonas sp. TJI-51]
gi|324097548|gb|EGB95768.1| non-specific serine/threonine protein kinase [Pseudomonas sp. TJI-51]
Length = 1105
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 261/509 (51%), Gaps = 65/509 (12%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRA 355
P + L +Q++GL WL +L G GGILGDDMGLGKT+Q L S RL+ A
Sbjct: 628 PVALRASLRAYQQQGLNWLQALREIGTGGILGDDMGLGKTLQALAHLLLEKESGRLVSPA 687
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
LVV P +L+ +W+ E ++ G +++ + L D ++LTTY ++ +
Sbjct: 688 LVVMPTSLIPNWLDEAARFAPDLRVLPLHGPG-RSKHFA---KLGDYDLVLTTYALLPRD 743
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
+ LR + W ++LDE IK+ +++ A + E+ + R+ ++GTP++
Sbjct: 744 LQHLRAHA------------WHLLVLDEAQNIKSSTSKAALAACELQATQRLCLTGTPME 791
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
NNL ELW++F+F P LG+ K F + Y PI R D + L R++
Sbjct: 792 NNLGELWSIFHFLMPGWLGELKRFNQDYRTPIERHGDSERM-----------AHLANRVR 840
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRR K +V E L K EM+ W+ L+ QR YEA V A D
Sbjct: 841 PFLLRRTKEQVATE--------LPAKTEMVHWVELSDAQRDTYEA------VRVAMD--- 883
Query: 596 LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQ 655
KK+ D + AA + +D++L +L + + D
Sbjct: 884 -------KKVRDE--IARNGAARSQIVILDALLKLRQVCCDLRLVKGVESKGNQAD---- 930
Query: 656 HDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASD 715
K+ +L +LD+L+ EG VL+FSQ ML LI++ + + ++ + G T+ D
Sbjct: 931 ----KGKLGALLQMLDELLSEGRRVLLFSQFTSMLALIEQELQKRQIRYSLLTGDTR--D 984
Query: 716 RVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ 775
R V FQ+GD + +FL++ + GG+GL LT AD VI DP WNP+++NQ+ DRAYRIGQ
Sbjct: 985 RRTPVQQFQQGD-SEVFLISLKAGGVGLNLTAADTVIHFDPWWNPASENQATDRAYRIGQ 1043
Query: 776 KKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
K V V++L+T GTVEEKI Q K L
Sbjct: 1044 DKPVFVFKLITRGTVEEKIQALQQEKAAL 1072
>gi|340716725|ref|XP_003396845.1| PREDICTED: TATA-binding protein-associated factor 172-like [Bombus
terrestris]
Length = 1873
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 276/543 (50%), Gaps = 51/543 (9%)
Query: 287 LSGPRST--YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLA 344
L PRS +LP + + L +Q++GL WL L+ G+L DDMGLGKT+Q LA
Sbjct: 1270 LLNPRSIPDTVLPIPVSSELRSYQQQGLNWLNFLNRYRLHGVLCDDMGLGKTLQTLCILA 1329
Query: 345 GLFHSR--LIKRALVVAPKTLLSHWIKELTAVGLSA--KIREYFGTCVKTRQYELQYVLQ 400
L H R +LVV P TL HW+ E + + +Y GT + +L+ ++
Sbjct: 1330 -LDHHRNPHAPPSLVVCPPTLTGHWVYEAEKFFKTKDLSVLQYVGT--PPEREKLRPMVT 1386
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++ +Y+I+R + W+Y +LDEGH+IKN T+ AK+
Sbjct: 1387 YHKLIVASYEIIRKDIDYFETCQ------------WNYCVLDEGHIIKNGKTKSAKATKR 1434
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ + HR+I+SGTPIQN++ ELW+LF+F P LG K F KY PIL + A +E+
Sbjct: 1435 LHANHRLILSGTPIQNDVLELWSLFDFLMPGFLGTEKQFAAKYSRPILACREPKAGPKEQ 1494
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L ++ P+ LRR K +V + L K + L+S QR LYE
Sbjct: 1495 EAGALAMEALHRQVLPFLLRRNKEDVLKD--------LPPKITQDYYCDLSSLQRTLYED 1546
Query: 581 FLN--SEIVLSAFD--------GSPLAALTILKKICDHP-LLLTKR-----AAEDVLDGM 624
F S +LSA S AL L+ +C+HP L+L +R + L
Sbjct: 1547 FHTRRSATLLSATSCTSTGNNGCSVFEALRYLRNVCNHPKLVLNQRHPLYATVCNTLKQR 1606
Query: 625 DSMLNP-EDAALAEKLAMHIADVAEKDDFQEQHDN--ISCKISFILSLLDKLIPEGHNVL 681
S L+ E AA L + D ++Q+ N + S ++ + H L
Sbjct: 1607 KSTLSDIEYAAKLPALKQLLLDCGIGQPQRQQNRNSVTTDGTSDNQPPQEQQLVSQHRAL 1666
Query: 682 IFSQTRKMLNLIQE---SIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQV 738
IF Q + ML+++++ + +LR+DG+ + + R IV F + LLT+QV
Sbjct: 1667 IFCQLKAMLDIVEKDLLCVHLPTVTYLRLDGSVQTTQRHSIVTRFNADPSIDVLLLTTQV 1726
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T TVEEKI Q
Sbjct: 1727 GGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRSTVEEKIMGLQ 1786
Query: 799 IFK 801
FK
Sbjct: 1787 KFK 1789
>gi|332024392|gb|EGI64590.1| TATA-binding protein-associated factor 172 [Acromyrmex echinatior]
Length = 1888
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 187/534 (35%), Positives = 269/534 (50%), Gaps = 55/534 (10%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--LIK 353
LP + L +QR+GL WL L+ G+L DDMGLGKT+Q LA L H R
Sbjct: 1293 LPISVAAELRSYQRQGLNWLNFLNRYHLHGVLCDDMGLGKTLQTLCILA-LDHHRNSQAP 1351
Query: 354 RALVVAPKTLLSHWIKE----LTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
+LVV P TL HW+ E LS + +Y GT + +L+ + +++ +Y
Sbjct: 1352 TSLVVCPPTLTGHWVYEAEKFFKVKDLS--VIQYAGT--PQDREKLRLRVPHHRLVVASY 1407
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
DIVR + + W+Y +LDEGH+IKN T+ AK++ + + HR+I+
Sbjct: 1408 DIVRKDIEFFEAHQ------------WNYCVLDEGHVIKNGKTKSAKAMKRLHANHRLIL 1455
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
SGTP+QN++ ELW+LF+F P LG K F KY PIL + A +E+ G+ +
Sbjct: 1456 SGTPVQNDVLELWSLFDFLMPGFLGSEKQFAAKYSRPILACREPKAGPKEQEAGALAMEA 1515
Query: 530 LRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLS 589
L ++ P+ LRR K +V + L K + L+ QR LYE F L+
Sbjct: 1516 LHRQVLPFLLRRNKEDVLQD--------LPPKITQDYYCDLSPLQRILYEDFRTRHSALT 1567
Query: 590 AFDGSP-------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAE----- 637
S AL L+ +C+HP L+ + + + ML + + LAE
Sbjct: 1568 NNSSSSNDSQSNVFEALRYLRNVCNHPKLVLSQ-GHPLYRTVCDMLKQQQSTLAEIEHGA 1626
Query: 638 ---KLAMHIADVAEKDDFQEQHDNISCKISFIL----SLLDKLIPEGHNVLIFSQTRKML 690
L + D Q+Q N S ++ S +L+ + H LIF Q + ML
Sbjct: 1627 KLLALKQLLLDCGIGQQQQQQTRNSSIAVNLTAESAHSQEQQLVSQ-HRALIFCQLKAML 1685
Query: 691 NLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
++++E + +LR+DG+ A+ R +V F + LLT+QVGGLGL LT
Sbjct: 1686 DIVEEDLLRTHLPTVTYLRLDGSVPAAHRHSVVTRFNADPSIDVLLLTTQVGGLGLNLTG 1745
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T TVEEKI Q FK
Sbjct: 1746 ADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRSTVEEKIMGLQKFK 1799
>gi|260943410|ref|XP_002616003.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720]
gi|238849652|gb|EEQ39116.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720]
Length = 879
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 283/579 (48%), Gaps = 69/579 (11%)
Query: 279 LEDEGSITLSGP--RSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDM 331
L D I + P R ++ K+ +L PHQ G+R+L+ + + KG I+ D+M
Sbjct: 266 LADILGIRAAAPSTRVPVVIDPKLARVLRPHQVAGVRFLYRCTSGLVDARAKGCIMADEM 325
Query: 332 GLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGT 386
GLGKT+Q + L R I + ++V P +L+ +W E+ +
Sbjct: 326 GLGKTLQCLALMWTLLRQGPSGRRTIDKCIIVCPSSLVRNWANEMDKWLGPGALTPLAVD 385
Query: 387 CVKTRQYELQYVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIW 436
T+ +L LQ + VL+ +Y+ +R N+ L G+ E G
Sbjct: 386 GKSTKSADLGQALQQWCTASGRNIVRPVLIISYETLRRNADKLAGT-----EVG------ 434
Query: 437 DYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDN 496
M+ DEGH +KN + +L + R+I+SGTPIQN+L E ++L F P LG
Sbjct: 435 -LMLADEGHRLKNGDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLTFANPGYLGTR 493
Query: 497 KWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSA 556
F+ YE ILRG D A D E + G EL + + + +RR N++ S
Sbjct: 494 NEFRRNYENTILRGRDADATDDEVKKGEQKLAELSQAVSKFIIRR-TNDIL-------SK 545
Query: 557 TLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRA 616
L K E +V++ L+ QR LYE F++S+ PL A+ +LKK+C HP LL+
Sbjct: 546 YLPVKYEYVVFVGLSPFQRALYEHFISSDDSSKLIASQPLKAIDMLKKLCTHPDLLSL-- 603
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
P+D + KL I D + + + I S S+L++ + +
Sbjct: 604 -------------PDDIQGSRKL---IPDDYQSSEAGGRGREIQTWFSAKFSILERFLHQ 647
Query: 677 -----GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVA 729
+++ S + L+LI++ K Y LR+DGT + R KIV+ F EG+
Sbjct: 648 IRTQTNDKIVVISNYTRTLDLIEKMCRYKRYGSLRLDGTMTINKRQKIVDRFNDPEGNEF 707
Query: 730 PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGT 789
IFLL+S+ GG G+ L A+R++++DP WNP+ D Q++ R +R GQKKD +YR M GT
Sbjct: 708 -IFLLSSKAGGCGINLIGANRLVLMDPDWNPAADQQALARVWRDGQKKDCFIYRFMCTGT 766
Query: 790 VEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
+EEKI+++Q K L + KE + R FS LR L
Sbjct: 767 IEEKIFQRQSMKLSLSSCVVDAKEDVERIFSGDALRLLF 805
>gi|448122424|ref|XP_004204446.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
gi|358349985|emb|CCE73264.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
Length = 836
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 190/634 (29%), Positives = 310/634 (48%), Gaps = 88/634 (13%)
Query: 231 EEYDDEDDCVIVSGKLVVNRPDRRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGP 290
E+ D E+ I + ++ V RP +R + H L +L + + P
Sbjct: 185 EDEDQENKENIENKEMPVERPSKR-----RRTHKSLAEIL------GICRNPEDALAKYP 233
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLAG 345
++ K+ +L PHQ G+R+L+ + KG I+ D+MGLGKT+Q +
Sbjct: 234 DVPVVIDPKLAKILRPHQVAGVRFLYRCTAGLVDPKAKGCIMADEMGLGKTLQCLTLMWT 293
Query: 346 LFHS-----RLIKRALVVAPKTLLSHWIKE---------LTAVGLSAKIREYFGTCVKTR 391
L + I++ ++V P +L+ +W E LT + + K T+
Sbjct: 294 LLKQSPRGKKTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAIDGK---------STK 344
Query: 392 QYELQYVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMIL 441
+L LQ + VL+ +Y+ +R N L G+ M+
Sbjct: 345 SSDLSAALQQWAVASGRNIVRPVLIISYETLRRNVDKLAGTHV------------GLMLA 392
Query: 442 DEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKE 501
DEGH +KN + +L + R+I+SGTPIQN+L E ++L NF P LG F++
Sbjct: 393 DEGHRLKNSDSLTFTTLNSLRCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGSRNDFRK 452
Query: 502 KYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKK 561
+E ILRG D A + EK G EL + + + +RR N++ + L K
Sbjct: 453 NFENDILRGRDADATEDEKNKGDKKLTELTQLVSKFIIRR-TNDILAQ-------YLPIK 504
Query: 562 NEMIVWLRLTSCQRQLYEAFLNS-EI--VLSAFDGSPLAALTILKKICDHPLLLTKRAAE 618
E +V++ L+ Q++LY F+ S EI +L PL A+ ILKK+C+HP LL+
Sbjct: 505 YEYVVFVGLSDMQKELYRHFITSPEIKKLLRGVGSQPLKAIGILKKLCNHPDLLSLPGD- 563
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
++G + + PED +I +E S K S + L KL E +
Sbjct: 564 --IEGSERYI-PED---------YIPVSGGHGRNKEVQTWFSGKFSILERFLYKLRVETN 611
Query: 679 N-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTS 736
+ +++ S + L+LI++ +K Y LR+DGT + R K+V+ F + + + IFLL+S
Sbjct: 612 DKIVLISNYTQTLDLIEKMCRTKRYGSLRLDGTMNINKRQKLVDRFNDPEGSEFIFLLSS 671
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKKD +YR ++ GT+EEKI++
Sbjct: 672 KAGGCGINLIGANRLILIDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQ 731
Query: 797 KQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
+Q K L + KE + R FS +L++L
Sbjct: 732 RQSMKLSLSSCVVDEKEDVERLFSADNLKQLFEF 765
>gi|327263495|ref|XP_003216555.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Anolis carolinensis]
Length = 756
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 202/658 (30%), Positives = 312/658 (47%), Gaps = 125/658 (18%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS---- 349
+ +P I L +QREG ++L + + +G ILGDDMGLGKT+Q+ FLA + +
Sbjct: 104 HQIPYTINRYLRDYQREGAQFLHGHYVRKRGCILGDDMGLGKTVQVISFLAAMLNKKGAR 163
Query: 350 -----------RLIKRA---------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCV- 388
R +K L+V+P ++L +W EL G YF V
Sbjct: 164 ADIENNMPEFLRTMKNEMSSVPKKIFLIVSPLSVLYNWKDELDTWG-------YFKVIVL 216
Query: 389 --KTRQYELQYVLQDKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGH 445
+ YEL + + K + LTTY+ +R DE + W +I+DE H
Sbjct: 217 HGNKKDYELNRIKKGKCEIALTTYETLR----------LFLDELNSLE--WSAVIVDEVH 264
Query: 446 LIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYEL 505
IKNP Q +++ + R+ ++GT +QNN+KELW + ++ P LLG+ FK+++
Sbjct: 265 RIKNPKAQITQTMKALTCKVRLGLTGTILQNNMKELWCVMDWAVPGLLGNEARFKKEFSD 324
Query: 506 PILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMI 565
P+ G A RE G ++L +++ YFLRR K + + L KK + +
Sbjct: 325 PVEHGQRHTATKRELATGRKAMQKLAKQMSGYFLRRTKALI--------NDQLPKKEDRM 376
Query: 566 VWLRLTSCQRQLYEAFLNSE---IVLSA--------------------FDGSPLAA---- 598
V+ LT QR +Y+A L +E +VL A G + A
Sbjct: 377 VYCSLTEFQRAVYKAVLETEDVRLVLQARKPCSCNSGRKRKNCCYKTNVHGETMQALYFS 436
Query: 599 -LTILKKICDHPLLL------------TKRAAEDVLDGMDSMLNPEDAALAEKLAMH-IA 644
LTIL+KI +H LL +R E+V P+ L++ A I+
Sbjct: 437 YLTILRKIANHTGLLQIDNTSKQQEAHIRRVCEEVFSKF-----PDFVQLSKDAAFETIS 491
Query: 645 DVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKF 704
D S K+ + LL+ VL+FS + K+L+++++ + G +
Sbjct: 492 D-----------PKYSGKMKVLQKLLNHFRKNKDKVLLFSFSTKLLDVLEQYCMASGLDY 540
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
R+DG TKA DRVKIV +F + I L+++ GGLGL A+ VI+ DP WNP+ D
Sbjct: 541 RRLDGNTKAEDRVKIVKEFNGMEEVNICLVSTMAGGLGLNFVGANIVILFDPTWNPANDL 600
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF-----S 819
Q++DRAYRIGQ +DV V+RL++ GTVEE +Y +Q++K L + RYF S
Sbjct: 601 QAIDRAYRIGQCRDVKVFRLISLGTVEEMMYLRQVYKQQLHCVVVGSENAKRYFEAVQGS 660
Query: 820 QQDLRELLSLPK----QGFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVS 873
++ EL + Q LT++ L D H +E QF DT+ +A ++
Sbjct: 661 KEHQGELFGIHNLFRFQDHGSCLTKEILE----DHHMPIFEVEQQAQFGDTVELALIA 714
>gi|67467805|ref|XP_649984.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56466523|gb|EAL44598.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449707532|gb|EMD47179.1| chromodomain helicase-DNA-binding protein, putative [Entamoeba
histolytica KU27]
Length = 1247
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 269/527 (51%), Gaps = 79/527 (14%)
Query: 299 KIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALV 357
K GN L +Q EG WL C+GKG IL D+MGLGKT+Q+ FL L+ +L L+
Sbjct: 295 KHGNKLRSYQLEGHNWLVFNWCRGKGCILADEMGLGKTVQVVSFLEHLYSFQKLQGPFLI 354
Query: 358 VAPKTLLSHWIKE-LTAVGLSAKIREYFGTCVK---TRQYELQYV-LQDK--------GV 404
V P +++ HW +E L ++ I Y G+ + YE Y Q K V
Sbjct: 355 VVPLSMIEHWHREILEWTDMNVVI--YHGSKGNRQLVKYYEWYYKDFQGKLIPGHLKFHV 412
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
LLTTY+IV ISD W ++DE H +KN ++ K+L I +
Sbjct: 413 LLTTYEIV------------ISDWEDLSKISWLVTVVDEAHRLKNKDSKLLKALCNIQTN 460
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
H+++++GTPIQNNL ELW L N+ P+ + F ++ ++LD+ +
Sbjct: 461 HKVLLTGTPIQNNLGELWTLLNYIEPKTFPSLEEFDHEF----------NSLDK----SA 506
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-- 582
+L+E I+P+FLRR+KNEV ++ K E I+ + LT Q+Q Y A
Sbjct: 507 EQVNKLQESIKPFFLRRMKNEV--------EKSIPPKEETIIEVELTMVQKQYYRALYEK 558
Query: 583 NSEIVLSAFDGSPLAAL----TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
N E + GS + L L+K+C+HP L+ ++ D+ PE +
Sbjct: 559 NREFLNKGCVGSNVPNLQNLMMQLRKVCNHPYLIPG------VEEKDTAQFPEGSP---- 608
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
D+ Q S K+ + LL KL + H VLIFSQ +K+LN+I++ +
Sbjct: 609 ------------DYFNQLIRSSGKLVLLDKLLPKLYADHHKVLIFSQLKKVLNIIEKYLK 656
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPA 757
KGY + R+DG+ K+ DR ++ F ++ IFLL ++ GG G+ L++AD VI+ D
Sbjct: 657 YKGYFYERLDGSIKSEDRQNAIDRFMNPEMNRFIFLLCTRAGGFGINLSEADTVIIFDSD 716
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
WNP D Q+ R +RIGQKK+V VYRL++ T E ++ + K GL
Sbjct: 717 WNPQNDLQAQARCHRIGQKKEVKVYRLVSKNTYERYMFERASMKLGL 763
>gi|407710853|ref|YP_006794717.1| SNF2-like protein [Burkholderia phenoliruptrix BR3459a]
gi|407239536|gb|AFT89734.1| SNF2-like protein [Burkholderia phenoliruptrix BR3459a]
Length = 1175
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 280/561 (49%), Gaps = 78/561 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKR 354
+P + L +Q++GL W+ L QG G+L DDMGLGKT+Q + LA RL +
Sbjct: 656 VPSALRAQLRAYQQQGLNWMQYLREQGLAGVLADDMGLGKTVQTLAHILAEKEAGRLDQP 715
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
AL+V P TL+ +W +E K+ G K R ++ + ++LTTY ++
Sbjct: 716 ALIVVPTTLVHNWREEARRFAPELKVLVLNGPQRKDRFEQIG----EHELILTTYALLWR 771
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+ K L + +ILDE +KN +T+ A+++ + + HR+ ++GTP+
Sbjct: 772 DQKVLAEHQY------------HLLILDEAQYVKNATTKAAQAIRGLAARHRLCLTGTPL 819
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGND--KHALDREKRIGSAVAKELRE 532
+N+L ELW+ F+F P LG K F ++ PI + ND + +L L
Sbjct: 820 ENHLGELWSQFDFLLPGFLGSQKDFTRRWRNPIEKNNDGVRRSL-------------LAR 866
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--EIVLSA 590
RI+P+ LRR K+EV E L K ++ + L QR LYE + E V +A
Sbjct: 867 RIRPFMLRRRKDEVAKE--------LPAKTTIVCSVDLEGAQRDLYETVRTAMQEKVRAA 918
Query: 591 FDGSPLA--------ALTILKKICDHPLLLTK------RAAEDVLDGMD--------SML 628
LA AL L+++C P LL K AA+ +G D +
Sbjct: 919 VSAQGLARSHIIVLDALLKLRQVCCDPRLLRKLHGAEHSAADSAGEGADVSAGETAKTHE 978
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRK 688
N DA L D AE+ S K+ +LS+L +LI EG VL+FSQ
Sbjct: 979 NSSDAPLRSP------DKAERG----ARTTRSAKLDLLLSMLPELIEEGRRVLLFSQFTG 1028
Query: 689 MLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKA 748
ML LI E++ ++ + G T +DR+ V FQ+G V P+FL++ + GG+GL LT A
Sbjct: 1029 MLALIAEALDEAAIPYVILTGDT--ADRITPVERFQQGKV-PLFLISLKAGGVGLNLTAA 1085
Query: 749 DRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA 808
D VI DP WNP+ +NQ+ DRA+R+GQ K V VY+L+ G++EEKI Q K GL +
Sbjct: 1086 DTVIHYDPWWNPAAENQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSI 1145
Query: 809 -TEHKEQIRYFSQQDLRELLS 828
+E FS D+ L +
Sbjct: 1146 LSEDAAGAAKFSDDDIDALFA 1166
>gi|340711976|ref|XP_003394541.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
containing DEAD/H box 1-like [Bombus terrestris]
Length = 831
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/524 (31%), Positives = 274/524 (52%), Gaps = 55/524 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA----LVVA 359
L P+Q GL WL +H Q GIL D+MGLGKT+Q+ FL L + L L+V
Sbjct: 263 LAPYQMVGLNWLAVMHAQNVNGILADEMGLGKTVQVIAFLTYLKEAGLRDEKDGPHLIVV 322
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV---LQDKGVLLTTYDIVRNNS 416
P + + +W EL K+ +Y+G+ + ++ L + L D VLLTTY+++ +
Sbjct: 323 PSSTMENWNNELERWSPGLKVVQYYGSQEERKEMRLGWRNGDLDDVDVLLTTYNLISSTP 382
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQN 476
+ R + Y++ DE H++KN T R ++L+ I + HRI+++GTP+QN
Sbjct: 383 EERRLFRVMP---------IHYVVFDEAHMLKNMGTIRYENLVRINAKHRILLTGTPLQN 433
Query: 477 NLKELWALFNFCCPELLGDNK-----WFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
NL EL +L F P L + F + + P ++ N++ L ++++ +A +
Sbjct: 434 NLLELMSLLIFVMPSLFASKQADLKSLFSKNPKAPSVKKNNEQPLFEQEQVKNA-----K 488
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
+ ++P+ LRRLK EV + L +K E ++ + QR++Y + +E A
Sbjct: 489 QIMRPFVLRRLKAEVLRD--------LPEKTERVIKCPMIEKQRKMYTNLV-AEFSAEAD 539
Query: 592 DGSPLAALTI---LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
+ + + + L+K+ +HPLL+ E L + S L E + + D+
Sbjct: 540 QSTEVNGIGMMMQLRKLANHPLLVRDYYNESKLKVISSRLAKEHSYKQKNPDYVFEDLQW 599
Query: 649 KDDFQ-----------------EQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
D+Q ++ + + K+ + LL KL EGH VLIFSQ +L+
Sbjct: 600 MSDYQINQLTRTYKSLAGLGLPQELISEAGKLKILDELLPKLKEEGHRVLIFSQFTMILD 659
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+++E + +G +LR+DG+T +DR ++N + E + IFLL+++ GGLG+ LT AD V
Sbjct: 660 ILEEYLTIRGRTYLRLDGSTPVTDRQYLINQYMEDESIFIFLLSTKAGGLGINLTAADTV 719
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
I+ D +NP D Q+ DR +R+GQK+ V + RL++ T+EE IY
Sbjct: 720 IIHDIDFNPYNDKQAEDRCHRVGQKRPVSIIRLLSEATIEEGIY 763
>gi|428182103|gb|EKX50965.1| hypothetical protein GUITHDRAFT_157269 [Guillardia theta CCMP2712]
Length = 721
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 190/593 (32%), Positives = 288/593 (48%), Gaps = 91/593 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P KI L +Q+EG+ W+ L GIL DDMGLGKT+Q ++ H+R K
Sbjct: 115 YEIPVKIAADLRRYQQEGVNWMAFLMKYQLHGILCDDMGLGKTLQTICIISSDHHNRRKK 174
Query: 354 RA------------LVVAPKTLLSHWIKELTAV--GLSAKIREYFGTCVKTRQYELQYVL 399
A LVV P TL+ HW E++ + + ++ G+ + + LQ +
Sbjct: 175 FAENRDPGSAPLPSLVVCPPTLVGHWDFEISKFLPDQALQCVQFVGS--PSERSALQETI 232
Query: 400 QDKG--VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKS 457
G V++T+Y+ +RN + +F +Y +LDEGH+IKN ++ ++
Sbjct: 233 TKGGDIVVVTSYETLRNEIDFMGKLTF------------NYCVLDEGHMIKNAKSKTTQA 280
Query: 458 LLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALD 517
+ + + HR+I+SGTPIQNN+ ELW+LF+F P LG K+F + Y PI +
Sbjct: 281 VKAVRANHRLILSGTPIQNNVLELWSLFDFLMPGFLGSEKYFNQAYSKPIRASRNAKCSS 340
Query: 518 REKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQL 577
++ G+ + L ++ P+ LRR K EV + L K + L+ Q++L
Sbjct: 341 QQSEAGALALEALHRQVLPFMLRRTKTEVLSD--------LPPKIIQDYYCDLSPLQQKL 392
Query: 578 YEAFL----NSEIVLSAFDGSP---------------LAALTILKKICDHPLLL------ 612
Y F +E+V +A G AL L+K+ +HP L+
Sbjct: 393 YNDFAAKQKANEMVATAIKGEGEEGKSKEGGGVASHIFQALQYLRKLANHPKLVLGPSHP 452
Query: 613 -TKRAAEDV----LDGMDSMLNPEDAALAEKL---AMHIADVAEKDDFQEQHDNISCKIS 664
R A+++ +D D L P+ AL E L + A E+ D +Q N +
Sbjct: 453 EMARVAQELKSKNMDLSDISLAPKLVALKELLQECGIGAASEDEEGDLMQQEANEDSR-- 510
Query: 665 FILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVN 721
H VLIF+Q + ML++I+ + K +LR+DG+T + R +I
Sbjct: 511 -------------HRVLIFAQMKTMLDIIENDLLKKHLPSVTYLRMDGSTPNNGRFEIQQ 557
Query: 722 DFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 781
F I +LT+ VGGLGL LT AD VI V+ WNP+ D Q++DRA+RIGQKK V V
Sbjct: 558 KFNSDPSIDILMLTTHVGGLGLNLTGADTVIFVEHDWNPTRDLQAMDRAHRIGQKKVVNV 617
Query: 782 YRLMTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
YRL+T T+EEKI Q FK + + E +R L +L S P +G
Sbjct: 618 YRLITRNTLEEKIMGLQRFKLSIANSVINEENASLRNMDTSQLLDLFS-PAEG 669
>gi|190348945|gb|EDK41499.2| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 189/612 (30%), Positives = 303/612 (49%), Gaps = 91/612 (14%)
Query: 253 RRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGL 312
++D KS H L +L Y + D + PR + +L PHQ G+
Sbjct: 188 KKDSSRRKSQHRSLAEILGIYKPQTKFADVPVVI--DPR--------LAKVLRPHQVAGV 237
Query: 313 RWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLAGLFH-----SRLIKRALVVAPKT 362
++L+ + + KG I+ D+MGLGKT+Q + L ++ I + ++V P +
Sbjct: 238 KFLYRCTSGLMDPRAKGCIMADEMGLGKTLQCIALMWTLLRQGPRGTKTISKCIIVCPSS 297
Query: 363 LLSHWIKE---------LTAVGLSAKIREYFGTCVKTRQYELQYVLQD----------KG 403
L+ +W E LT + + K T+ +L LQ +
Sbjct: 298 LVRNWANEIVKWLGEGVLTPLAVDGK---------STKSADLGPALQQWSVASGRNIVRP 348
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
VL+ +Y+ +R N L G+ E G M+ DEGH +KN + +L +
Sbjct: 349 VLIISYETLRRNVDKLAGT-----EVG-------LMLADEGHRLKNGDSLTFTALNALRC 396
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
R+I+SGTPIQN+L E ++L NF P LG F++ +E ILRG D A D+EK IG
Sbjct: 397 ERRVILSGTPIQNDLSEYFSLLNFSNPGYLGTRNDFRKNFENAILRGRDADATDKEKEIG 456
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
+L + + + +RR N++ S L K E +V+++L+ Q+ LY+ FL
Sbjct: 457 DQKLSDLSKLVSKFIIRR-TNDIL-------SKYLPIKYEYVVFVKLSPLQKALYKHFLT 508
Query: 584 SEIVLSAFDGS---PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
S V G+ PL A+ +LKK+C HP LL R E+V G + +L P+D
Sbjct: 509 SPEVRKLLKGAGSQPLKAIGMLKKLCTHPELL--RLPEEV-SGSEDIL-PDDY------- 557
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGS 699
+ + +D +E S K + + L ++ E + +++ S + L+LI+
Sbjct: 558 ----ESSGRD--KEIRTWYSGKFAMLERFLHQIRTETDDKIVLISNYTQTLDLIERMCRY 611
Query: 700 KGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAW 758
K Y+ R+DGT + R K+V+ F + + IFLL+S+ GG G+ L A+R+I++DP W
Sbjct: 612 KRYQCCRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDW 671
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RY 817
NP+ D Q++ R +R GQKKD +YR ++ GT+EEKI+++Q K L + KE + R
Sbjct: 672 NPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVDRL 731
Query: 818 FSQQDLRELLSL 829
FS LR+L
Sbjct: 732 FSADLLRQLFQF 743
>gi|391326627|ref|XP_003737814.1| PREDICTED: TATA-binding protein-associated factor 172 [Metaseiulus
occidentalis]
Length = 1773
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 270/544 (49%), Gaps = 82/544 (15%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG--------LFHSRLIKRA--- 355
+Q+ G+ WL L+ GIL DDMGLGKT+Q LA S+ + A
Sbjct: 1199 YQQTGINWLAFLNQYNLHGILCDDMGLGKTLQSICLLASDHQRRQEDFLKSKSVDCAPMP 1258
Query: 356 -LVVAPKTLLSHWIKELTAVGLSAKI--REYFGTCVKTRQYELQYVLQDKG-----VLLT 407
+VV P TL HW+ E+ + Y G + ++ + Y + +L+
Sbjct: 1259 SIVVCPPTLTGHWVYEIKKFVQLKHLDPLHYTGPPFERQRLQTLYTKRHHNKSHNVILIA 1318
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
+YD+VRN+ G W+Y ILDEGH+IKN T+ ++++ ++ + HR+
Sbjct: 1319 SYDLVRNDIDFFSGIR------------WNYAILDEGHVIKNNKTKLSRAIKKLNAKHRL 1366
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
I+SGTPIQNN+ ELW LF+F P LG K+F +Y PIL + A +E+ G
Sbjct: 1367 ILSGTPIQNNVTELWNLFDFLMPGFLGSEKFFTARYAKPILASREGKASPKEQEQGVLAM 1426
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF----LN 583
+ L +++ P+ LRR K EV + L K + L+ Q +LYE F N
Sbjct: 1427 EALHKQVLPFVLRRTKEEVLSD--------LPPKIIQDYYCELSPLQLRLYEDFSKSKAN 1478
Query: 584 SEIV--LSAFDGSP------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAAL 635
+E+V L G+ AL L+K+C+HP L + +PE +A+
Sbjct: 1479 TEVVEALQKQTGTENRNQHVFQALHYLRKVCNHPKLALSPS------------HPEYSAI 1526
Query: 636 AEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL--------DKLIPEGHNVLIFSQTR 687
++L ++D ++S K+ + LL ++ I H L+F Q +
Sbjct: 1527 LKQL--------QEDKVSLNDISVSSKLLALRQLLQDCGIGTTEETIVNTHRCLVFFQLK 1578
Query: 688 KMLNLIQESIGSKGY---KFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLT 744
ML+L++ + K +LR+DG+ A DR +V F + LLT+QVGGLG+
Sbjct: 1579 SMLDLVENDLLKKNMPSVSYLRLDGSVPAGDRQSLVQKFNNDPSIDLLLLTTQVGGLGIN 1638
Query: 745 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
LT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T T+EEKI Q FK +
Sbjct: 1639 LTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNTLEEKIMGLQRFKMSI 1698
Query: 805 FKTA 808
T
Sbjct: 1699 ANTV 1702
>gi|213967360|ref|ZP_03395508.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv.
tomato T1]
gi|302058432|ref|ZP_07249973.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv.
tomato K40]
gi|302131163|ref|ZP_07257153.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|213927661|gb|EEB61208.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv.
tomato T1]
Length = 918
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 259/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 436 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 491
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 492 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 547
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 548 LLPRDMEMLEKQPL------------HVLILDEAQYIKNPNSKAAQAARNLTARQRLCLS 595
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I + ++ L L
Sbjct: 596 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRL-----------HHL 644
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 645 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 686
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L H V K
Sbjct: 687 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQ 738
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 739 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 791
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 792 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 848
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 849 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882
>gi|448118496|ref|XP_004203510.1| Piso0_001119 [Millerozyma farinosa CBS 7064]
gi|448120887|ref|XP_004204093.1| Piso0_001119 [Millerozyma farinosa CBS 7064]
gi|359384378|emb|CCE79082.1| Piso0_001119 [Millerozyma farinosa CBS 7064]
gi|359384961|emb|CCE78496.1| Piso0_001119 [Millerozyma farinosa CBS 7064]
Length = 1542
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 276/541 (51%), Gaps = 79/541 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK-RALVV 358
IG L +Q +GL+W+ SL GIL D+MGLGKT+Q L L + I LV+
Sbjct: 673 IGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLVEVKQIPGHFLVI 732
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E + K Y GT + + + + VLLTT++ V
Sbjct: 733 VPLSTLTNWNLEFEKWAPALKKITYKGTPYQRKLSQHDIKQGNFQVLLTTFEYV------ 786
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN S++ +++L S +R+I++GTP+QNN
Sbjct: 787 ------IKDRNLLSKIRWVHMIIDEGHRMKNSSSKLSETLTHHYHSDYRLILTGTPLQNN 840
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L E+ + V + L + ++
Sbjct: 841 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETL--LVIRRLHKVLR 898
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA--FDG 593
P+ LRRLK +V E D L K E ++ +++S Q +LY+ L ++ ++ G
Sbjct: 899 PFLLRRLKKDV--EKD------LPNKVEKVIKCKMSSLQSKLYQQMLKHNVLFASDPETG 950
Query: 594 SPLA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
P+ + L+KIC+HP V + ++ ++NP A
Sbjct: 951 KPVTIKNTNNQIMQLRKICNHPF---------VYEEVEYLINP---------------TA 986
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
E +D I +++ LLD+++P+ GH VLIF Q ++++++++ + +G K
Sbjct: 987 ETND-------IIWRVAGKFELLDRILPKFKRTGHRVLIFFQMTQIMDIMEDFLRLRGMK 1039
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
++R+DG TKA DR ++ F D FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 1040 YMRLDGATKADDRTGLLKQFNSQDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 1099
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKE 813
D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +E
Sbjct: 1100 DLQAQDRAHRIGQKNEVRILRLITEDSVEEMILERAYAKLEIDGKVIQAGKFDNKSTAEE 1159
Query: 814 Q 814
Q
Sbjct: 1160 Q 1160
>gi|294656433|ref|XP_002770263.1| DEHA2D05456p [Debaryomyces hansenii CBS767]
gi|199431470|emb|CAR65619.1| DEHA2D05456p [Debaryomyces hansenii CBS767]
Length = 838
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 179/575 (31%), Positives = 294/575 (51%), Gaps = 77/575 (13%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P ++ ++ +L PHQ G+++L+ + + KG I+ D+MGLGKT+Q +
Sbjct: 234 PDVPVVIDPRLAKILRPHQIAGVKFLYRCTSGLIDPRAKGCIMADEMGLGKTLQCLALMW 293
Query: 345 GLFHS-----RLIKRALVVAPKTLLSHWIKE---------LTAVGLSAKIREYFGTCVKT 390
L R I++ ++V P +L+ +W E LT + + K T
Sbjct: 294 TLLKQSPRGKRTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAVDGK---------ST 344
Query: 391 RQYELQYVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
+ +L LQ + VL+ +Y+ +R N L G+ E G M+
Sbjct: 345 KSSDLGQALQQWSVATGRNIVRPVLIISYETLRRNVDKLAGT-----EVG-------LML 392
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
DEGH +KN + +L + R+I+SGTPIQN+L E ++L NF P LG F+
Sbjct: 393 ADEGHRLKNGDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFR 452
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
+ +E ILRG D A D+EK + EL + + + +RR N++ S L
Sbjct: 453 KNFESAILRGRDADATDKEKEVSDKKLTELSQMVSKFIIRR-TNDIL-------SKYLPV 504
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNS-EI--VLSAFDGSPLAALTILKKICDHPLLLTKRAA 617
K E +V++ L+ Q++LYE F+ S EI +L PL A+ +LKK+C+H
Sbjct: 505 KYEYVVFVGLSPMQKKLYEYFVTSPEIKKLLKGVGSQPLKAIGMLKKLCNH---PDLLNL 561
Query: 618 EDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
D LDG DS++ PED ++ + + +E S K + L K+ E
Sbjct: 562 PDDLDGCDSLI-PED---------YVPAIGNGNRSREIQTWFSGKFMLLERFLHKIRTET 611
Query: 678 HN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLT 735
++ +++ S + L+LI++ K Y +R+DGT + R K+V+ F + + + IFLL+
Sbjct: 612 NDKIVLISNYTQTLDLIEKMCRYKKYANVRLDGTMNINKRQKLVDRFNDPEGSEFIFLLS 671
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
S+ GG G+ L A+R+I++DP WNP++D Q++ R +R GQKKD +YR ++ GT+EEKI+
Sbjct: 672 SKAGGCGINLIGANRLILIDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIF 731
Query: 796 RKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
++Q K L + KE + R FS +L++L
Sbjct: 732 QRQSMKLSLSSCVVDEKEDVERLFSADNLKQLFEF 766
>gi|405950159|gb|EKC18162.1| Putative global transcription activator SNF2L4 [Crassostrea gigas]
Length = 1527
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 254/508 (50%), Gaps = 54/508 (10%)
Query: 310 EGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLLSHWI 368
+GL WL SL+ GIL D+MGLGKT+Q G + L + + L++ P + LS+W+
Sbjct: 735 KGLEWLVSLYNNHLNGILADEMGLGKTIQTIGLITYLMERKKVNGPFLIIVPLSTLSNWV 794
Query: 369 KELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDE 428
E S Y G+ R Q VLLTTY+ + I D+
Sbjct: 795 LEFEKWAPSVVKIAYKGSPTTRRLLVPQLKAAKFNVLLTTYEYI------------IKDK 842
Query: 429 AGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKELWALFNF 487
A W YMI+DEGH +KN + + L + HR++++GTP+QN L ELWAL NF
Sbjct: 843 AALSKLRWRYMIIDEGHRMKNHHCKLTQVLNTHYCAPHRLLLTGTPLQNKLPELWALLNF 902
Query: 488 CCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVF 547
P + F++ + P +K L++E+ + + + L + ++P+ LRRLK EV
Sbjct: 903 LLPSIFKSCSTFEQWFNAPFAMTGEKVELNQEETL--LIIRRLHKVLRPFLLRRLKKEV- 959
Query: 548 HEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP------------ 595
+ L K E ++ +++ QR +Y I+L+ DGS
Sbjct: 960 -------ESQLPDKVEYVIKCEMSALQRCVYRHMQARGILLT--DGSEKDKKGRGGSKAM 1010
Query: 596 LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQ 655
+ + L+KIC+HP + ++ + ++ + + D
Sbjct: 1011 MNTIMQLRKICNHPF---------IFQHLEEAIAEHQGGTGASISGQVPSLTSLPDLYRS 1061
Query: 656 HDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASD 715
S K F+ +L KL H VL+F Q +++++++ +GY++LR+DGTTK+ D
Sbjct: 1062 ----SGKFEFLDRVLPKLKTLNHRVLLFCQMTSLMSILEDYFLYRGYRYLRLDGTTKSED 1117
Query: 716 RVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRI 773
R +++ F + D +P +FLL+++ GGLGL L AD VI+ D WNP D Q+ DRA+RI
Sbjct: 1118 RGQLLELFNQKD-SPYFLFLLSTRAGGLGLNLQAADTVIIYDSDWNPHQDLQAQDRAHRI 1176
Query: 774 GQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GQK +V V RLMT +VEEKI FK
Sbjct: 1177 GQKNEVRVLRLMTVNSVEEKILAAARFK 1204
>gi|443925702|gb|ELU44478.1| TBP associated factor (Mot1), putative [Rhizoctonia solani AG-1 IA]
Length = 2323
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 273/552 (49%), Gaps = 80/552 (14%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWL-----WSLHCQGKGGILGDDMGLGKTMQICGFLAGL 346
+ Y +P K+ L +Q+EG+ WL + LH DMGLGKT+Q LA
Sbjct: 1320 TPYEIPIKLNVELRKYQQEGINWLAFLAKYQLH----------DMGLGKTLQSIVILASK 1369
Query: 347 FHSRLIKR------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYE 394
H R + +L++ P TL HW E+ + K Y GT + ++
Sbjct: 1370 HHERAERYRETRSPDSVHIPSLIICPTTLTGHWYAEIVKYTNNLKALRYVGTSRERQRLV 1429
Query: 395 LQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQR 454
Q D V++ +YD VRN+ +L + W Y ILDEGH IKN T+
Sbjct: 1430 DQIPRHD--VVIASYDSVRNDIANLTQFN------------WHYCILDEGHQIKNGRTKI 1475
Query: 455 AKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKH 514
+++ I + HR+++SGTPIQNN+ ELW+LF+F P LG + F E++ PIL D
Sbjct: 1476 TQAVKMINAHHRLLLSGTPIQNNVLELWSLFDFLMPGFLGTEQQFNERFGKPILANKDAK 1535
Query: 515 ALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQ 574
A + + + + L +++ P+ LRRLK +V ++ L K + L+ Q
Sbjct: 1536 APAKTREAATLALEALHKQVLPFLLRRLKEQVLND--------LPPKIIQDHYCELSEMQ 1587
Query: 575 RQLYEAFLNSEI-----VLSAFDGSPLA-------ALTILKKICDHPLLLTKRAAEDVLD 622
+ LY+AF S+ + +GS A +L L+K+C+HP L+ K A++
Sbjct: 1588 KHLYDAFSQSQAGDMTQGMVKANGSANANQQHVFQSLQYLRKLCNHPTLVVKDASD---- 1643
Query: 623 GMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNIS-CKISFILSLLDKLIPEG---- 677
++ L A E A I D+ ++ C I S + + G
Sbjct: 1644 --EAALIGRFAIKGETNAKGIRDIRHAPKLLALRQLLNDCGIGAASSEDGETLKSGEDTD 1701
Query: 678 -----HNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVA 729
H VLIF Q R+ML++I+E + ++R+DG+T A+ R +V F
Sbjct: 1702 PISSQHRVLIFCQMRQMLDIIEEDLFRPLMPSVTYMRLDGSTPANQRHGVVQTFNSDPSI 1761
Query: 730 PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGT 789
LLT+ VGGLGLTLT AD VI V+ WNP D Q++DRA+R+GQKK V VYRL+T GT
Sbjct: 1762 DCLLLTTSVGGLGLTLTGADTVIFVEHDWNPMKDLQAMDRAHRLGQKKVVNVYRLITKGT 1821
Query: 790 VEEKIYRKQIFK 801
+EEKI Q FK
Sbjct: 1822 LEEKIMGLQRFK 1833
>gi|238487360|ref|XP_002374918.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus
NRRL3357]
gi|220699797|gb|EED56136.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus
NRRL3357]
Length = 682
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 176/573 (30%), Positives = 281/573 (49%), Gaps = 70/573 (12%)
Query: 288 SGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGF 342
+GPR ++ ++ +L PHQ EG+++L+ G I+ D MGLGKT+Q
Sbjct: 73 TGPRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISL 132
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL- 395
+ L LI++ ++ P +L+ +W EL L F K + EL
Sbjct: 133 MWTLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVK-WLGKDAITPFAVDGKASKTELT 191
Query: 396 ----QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
Q+ + + VL+ +Y+ +R ++L+ S ++ DEGH
Sbjct: 192 SQIKQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPI------------GLLLCDEGHR 239
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN + +L + R+I+SGTPIQN+L E +AL NF P+LLG F++++ELP
Sbjct: 240 LKNKDSLTWTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELP 299
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D D +K+ G EL + + +RR N++ + L K E +V
Sbjct: 300 ILRGRDAAGSDEDKKKGDECLAELSTIVNKFIIRR-TNDIL-------TKYLPVKYEHVV 351
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L+ Q LY F+ S + S G PL A+ +LKK+C+HP LL L G
Sbjct: 352 FCNLSQFQLDLYNHFIQSPEIRSLLRGKGSQPLKAIGLLKKLCNHPDLLNLSTD---LPG 408
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GH 678
+ PED E + + +I S + +LD+++
Sbjct: 409 CEFAF-PEDYVPPEA--------------RGRDRDIKSWYSGKMMVLDRMLARIRQDTND 453
Query: 679 NVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQ 737
+++ S + L+L ++ S+GY LR+DGT + R K+V+ F D +FLL+S+
Sbjct: 454 KIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSK 513
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++
Sbjct: 514 AGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQR 573
Query: 798 QIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
Q K L + E + R+FS + LREL
Sbjct: 574 QSHKQSLSSCVVDSAEDVERHFSLESLRELFQF 606
>gi|28869303|ref|NP_791922.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|28852544|gb|AAO55617.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 918
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 259/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 436 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 491
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 492 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 547
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 548 LLPRDMEMLEKQPL------------HVLILDEAQYIKNPNSKAAQAARNLTARQRLCLS 595
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I + ++ L L
Sbjct: 596 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRL-----------HHL 644
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 645 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 686
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L H V K
Sbjct: 687 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQ 738
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 739 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 791
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 792 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 848
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 849 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882
>gi|344302287|gb|EGW32592.1| hypothetical protein SPAPADRAFT_51134 [Spathaspora passalidarum
NRRL Y-27907]
Length = 831
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 180/603 (29%), Positives = 296/603 (49%), Gaps = 83/603 (13%)
Query: 260 KSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLH 319
+ H L +L ++ D + P ++ K+ +L PHQ G+++L+
Sbjct: 202 RRVHKSLAEIL------GIVTDPEAALAKYPDVPVVIDPKLAKILRPHQVAGVKFLYRCT 255
Query: 320 C-----QGKGGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIK 369
+ KG I+ D+MGLGKT+Q + L R I++ ++V P +L+ +W
Sbjct: 256 AGLIDPRAKGCIMADEMGLGKTLQCLALMWTLLRQSPRGKRTIEKCIIVCPSSLVRNWAN 315
Query: 370 E---------LTAVGLSAKIREYFGTCVKTRQYELQYVLQD----------KGVLLTTYD 410
E LT + + K T+ +L LQ + VL+ +Y+
Sbjct: 316 EIVKWLGEGVLTPLAVDGK---------STKSNDLGLALQQWSTATGRNVVRPVLIVSYE 366
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
+R N L G+ E G M+ DEGH +KN + +L + R+I+S
Sbjct: 367 TLRRNVDKLAGT-----EVG-------LMLADEGHRLKNGDSLTFTALNSLKCERRVILS 414
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTPIQN+L E ++L NF P LG FK +E ILRG D A D+E+ EL
Sbjct: 415 GTPIQNDLSEYFSLLNFANPGYLGTRNDFKRNFENVILRGRDADATDKERAKSDEKLTEL 474
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
+ + + +RR N++ S L K E +++ L+ Q LY F+ S +
Sbjct: 475 SQMVSKFIIRR-TNDIL-------SKYLPVKYEYVLFTGLSPMQSALYNYFITSPEIKKL 526
Query: 591 FDGS---PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
G+ PL A+ +LKK+C+HP LL D ++G + ++ PED + + +
Sbjct: 527 LRGTGSQPLKAIGLLKKLCNHPDLLN---LPDDIEGCEELI-PED---------YSSSIG 573
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLR 706
+E S K + L ++ E ++ +++ S + L+LI++ K Y LR
Sbjct: 574 ASGRNREIQTWFSGKFMILERFLHQINTETNDKIVLISNYTQTLDLIEKMCRYKKYGVLR 633
Query: 707 IDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
+DGT + R K+V+ F + D + IFLL+S+ GG G+ L A+R++++DP WNP++D Q
Sbjct: 634 LDGTMNINKRQKLVDKFNDPDGSEFIFLLSSKAGGCGINLIGANRLVLIDPDWNPASDQQ 693
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLR 824
++ R +R GQKKD +YR ++ GT+EEKI+++Q K L + KE + R FS +LR
Sbjct: 694 ALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVERLFSADNLR 753
Query: 825 ELL 827
+L
Sbjct: 754 QLF 756
>gi|398940415|ref|ZP_10669232.1| DNA/RNA helicase, superfamily II, SNF2 family [Pseudomonas sp.
GM41(2012)]
gi|398162933|gb|EJM51111.1| DNA/RNA helicase, superfamily II, SNF2 family [Pseudomonas sp.
GM41(2012)]
Length = 895
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 171/507 (33%), Positives = 256/507 (50%), Gaps = 65/507 (12%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRL 351
T + P + L P+Q EGL W+ SL GGIL DDMGLGKT+Q + L+ RL
Sbjct: 414 TAIAPDGLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILSEKNAGRL 473
Query: 352 IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDI 411
+ +VV P +L+ +W+ E K+ +G K + ++ L D ++LTTY +
Sbjct: 474 DRPCMVVMPTSLIPNWLDEAAHFTPQLKVLALYGASRK-KHFD---TLADYDLILTTYAL 529
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
+ + + L ++LDE IKNP+++ A + E+ + R+ +SG
Sbjct: 530 LPKDVERLAAQPL------------HVLVLDEAQYIKNPNSKAAHAARELNARQRLCLSG 577
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
TP++N+L ELW+LF+F P LGD K F Y +PI EKR + L
Sbjct: 578 TPLENHLGELWSLFHFLLPGWLGDVKSFNRDYRVPI-----------EKRASEVRLQHLN 626
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 627 GRIKPFLLRRTKEQVATE--------LPPKTEIIHWVELNEAQRDVYETM---------- 668
Query: 592 DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
L + KK+ D + K A + ++++L +L D
Sbjct: 669 ------RLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLV--------NDA 712
Query: 652 FQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTT 711
+ S K+ ++ +L++L EG +L+FSQ ML+LI++ + +G + + G T
Sbjct: 713 TLPTRGSTSGKLDSLMEMLEELFDEGRRILLFSQFTSMLSLIEDELKKRGVDYALLTGQT 772
Query: 712 KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
+ DR V DFQ G IFL++ + GG+GL LT+AD VI DP WNP+T+NQ+ DRAY
Sbjct: 773 R--DRRAPVKDFQSGKRQ-IFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAY 829
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
RIGQ+K V VY+++ GTVEEKI Q
Sbjct: 830 RIGQEKPVFVYKMIARGTVEEKIQHLQ 856
>gi|410090169|ref|ZP_11286768.1| SNF2-like protein [Pseudomonas viridiflava UASWS0038]
gi|409762495|gb|EKN47510.1| SNF2-like protein [Pseudomonas viridiflava UASWS0038]
Length = 914
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 264/514 (51%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
+P + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 VPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDASNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L+ SF +ILDE IKNP+++ A++ ++ + R+ +S
Sbjct: 544 LLPRDLELLKSQSF------------HLLILDEAQYIKNPNSKAAQAARDLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ + L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----QHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNPDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + D+L+ EG +L+FSQ ML+LI+ + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFDELLAEGRKILLFSQFTSMLSLIEAELKQRGIPYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|346326947|gb|EGX96543.1| DNA repair and recombination protein RAD54 [Cordyceps militaris
CM01]
Length = 844
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 289/566 (51%), Gaps = 64/566 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
PR +L K+ +L PHQ EG+++++ + G I+ D+MGLGKT+Q L
Sbjct: 158 PRVPVVLDPKLAGVLRPHQVEGVKFMYRCVAGLIDEKANGCIMADEMGLGKTLQCITLLW 217
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A+VV P +L+ +W ELT L A F K+ + EL
Sbjct: 218 TLLKQSPDAGKPTIQKAIVVCPASLVKNWANELTK-WLGANAINPFAIDGKSSKEELTRQ 276
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + V++ +Y+ +R N + L+ + + DEGH +K
Sbjct: 277 LRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI------------GLLFCDEGHRLK 324
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + +L + + R+I++GTPIQN+L E ++L +F P+LLG F++++E+PIL
Sbjct: 325 NGDSNTFNALNNLNVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGSRLDFRKRFEIPIL 384
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A +++K G A EL + + +RR N++ S L K E +V+
Sbjct: 385 RGRDADASEKDKERGDACTSELLAIVNKFLIRR-TNDIL-------SKYLPVKYEHVVFC 436
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + + G PL A+ +LKK+C+HP LL ED+ D
Sbjct: 437 NLAPFQLDLYNYFITSPDIQALLRGKGSQPLKAINMLKKLCNHPDLLN--LGEDLPGSED 494
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
P+D ++ A D +E S K+ + +L ++ + ++ +++ S
Sbjct: 495 CF--PKD---------YVPKEARGRD-REIKPWYSGKMQVLDRMLARIRRDTNDKIVLIS 542
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQVGGLG 742
L+L ++ S+ Y LR+DGT + R K+V+ F EGD +FLL+S+ GG G
Sbjct: 543 NYTSTLDLFEKLCRSRQYGSLRLDGTMNVNKRQKLVDRFNDPEGDEF-VFLLSSKAGGCG 601
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
+ L A+R+I+ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K
Sbjct: 602 INLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQ 661
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELL 827
L + E + R+FS LREL
Sbjct: 662 SLSSCVVDSAEDVQRHFSLDGLRELF 687
>gi|336272956|ref|XP_003351233.1| RAD54 protein [Sordaria macrospora k-hell]
gi|380092753|emb|CCC09506.1| putative RAD54 protein [Sordaria macrospora k-hell]
Length = 824
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 179/569 (31%), Positives = 290/569 (50%), Gaps = 68/569 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ ++ +L PHQ EG+R+++ C + G I+ D+MGLGKT+Q
Sbjct: 204 PRVPVVIDPRLAKVLRPHQIEGVRFMY--RCVTGMIDEKANGCIMADEMGLGKTLQCITL 261
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
L L I++A+V P +L+ +W EL L A F K + EL
Sbjct: 262 LWTLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVK-WLGADAITPFAIDGKASKEELT 320
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N+ L+G+ M+ DEGH
Sbjct: 321 RQLRQWAIASGRSVTRPVIIVSYETLRLNADELKGTPI------------GLMLCDEGHR 368
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN +Q +L + + R+I+SGTPIQN+L E +AL +F P+LLG F++++E+P
Sbjct: 369 LKNGDSQTFSALNSLNVSRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFEIP 428
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A + E++ G EL + + +RR N++ S L K E +V
Sbjct: 429 ILRGRDADASEAERKRGDECLAELLAVVNKFIIRR-TNDIL-------SKYLPVKYEHVV 480
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q LY F+ S + + G PL A+ +LKK+C+HP LL A L G
Sbjct: 481 FCNLAPFQLDLYNYFVASPDIQALLRGKGSQPLKAINMLKKLCNHPDLLDLSAD---LPG 537
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLI 682
+ P+D ++ A D ++ S K+ + +L ++ + ++ +++
Sbjct: 538 CEQYW-PDD---------YVPKEARGRD-RDVKPWYSGKMQVLDRMLARIRADTNDKIVL 586
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQVGG 740
S + L+L + ++ Y LR+DGT + R K+V+ F EG+ +FLL+S+ GG
Sbjct: 587 ISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFNDPEGEEF-VFLLSSKAGG 645
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 646 CGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSH 705
Query: 801 KGGLFKTATEHKEQI-RYFSQQDLRELLS 828
K L + E + R+FS LREL +
Sbjct: 706 KQSLSSCVVDSAEDVERHFSLDSLRELFT 734
>gi|422591224|ref|ZP_16665871.1| helicase/SNF2 family domain-containing protein [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330878594|gb|EGH12743.1| helicase/SNF2 family domain-containing protein [Pseudomonas
syringae pv. morsprunorum str. M302280]
Length = 918
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 261/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 436 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 491
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 492 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 547
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 548 LLPRDMEMLEKQPL------------HVLILDEAQYIKNPNSKAAQAARNLTARQRLCLS 595
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 596 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 644
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 645 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 686
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L H V K
Sbjct: 687 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQ 738
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 739 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 791
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 792 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 848
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 849 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882
>gi|301381674|ref|ZP_07230092.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv.
tomato Max13]
Length = 918
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 259/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 436 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 491
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 492 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 547
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 548 LLPRDMEMLEKQPL------------HVLILDEAQYIKNPNSKAAQAARNLTARQRLCLS 595
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I + ++ L L
Sbjct: 596 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRL-----------HHL 644
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 645 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 686
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L H V K
Sbjct: 687 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQ 738
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 739 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 791
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 792 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 848
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 849 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882
>gi|289624075|ref|ZP_06457029.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|422585064|ref|ZP_16660156.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330869863|gb|EGH04572.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 914
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 176/514 (34%), Positives = 262/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +GT +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGT----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|452982355|gb|EME82114.1| hypothetical protein MYCFIDRAFT_154704 [Pseudocercospora fijiensis
CIRAD86]
Length = 1398
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 264/518 (50%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRALVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L R LV+
Sbjct: 534 VGGTLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKRQPGPYLVI 593
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S + Y G + +Q++ Q VLLTTY+ +
Sbjct: 594 VPLSTLTNWNSEFERWAPSVQRIVYKGPPNQRKQHQQQIRYGQFQVLLTTYEFI------ 647
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + ++ + + +R+I++GTP+QNN
Sbjct: 648 ------IKDRPVLSKIKWLHMIVDEGHRMKNAQSKLSSTITQYYHTRYRLILTGTPLQNN 701
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWA+ NF P + K F E + P G DK L E++I V + L + ++
Sbjct: 702 LTELWAMLNFVLPNIFKSAKSFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVLR 759
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY-EAFLNSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ L++ Q +LY + L++ I DG
Sbjct: 760 PFLLRRLKKDV--EKD------LPDKTEKVIKCNLSALQAKLYKQLMLHNRINTIGADGK 811
Query: 595 PLA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP
Sbjct: 812 KTGMRGLSNMLMQLRKLCNHPF---------VFEEVEEQMNPSKYT-------------- 848
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH LIF Q +++N++++ + +G K+
Sbjct: 849 --------NDLIWRTAGKFELLDRILPKFQATGHRCLIFFQMTQIMNIMEDFLRFRGIKY 900
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TKA DR +++ F G FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 901 LRLDGSTKADDRSELLKQFNAPGSEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD 960
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL+T +VEEKI + +K
Sbjct: 961 LQAQDRAHRIGQKNEVRILRLITSSSVEEKILERAQYK 998
>gi|407362812|ref|ZP_11109344.1| SNF2-like protein [Pseudomonas mandelii JR-1]
Length = 897
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 173/513 (33%), Positives = 257/513 (50%), Gaps = 65/513 (12%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRL 351
T P + L P+Q EGL W+ SL GGIL DDMGLGKT+Q + L+ RL
Sbjct: 415 TATAPEGLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILSEKNAGRL 474
Query: 352 IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDI 411
+ +VV P +L+ +W+ E K+ +G +R+ +++ D ++LTTY +
Sbjct: 475 DRPCMVVMPTSLIPNWLDEAAHFTPQLKVLALYGA---SRKKHFDHLV-DYDLILTTYAL 530
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
+ + + L ++LDE IKNP+++ A + E+ + R+ +SG
Sbjct: 531 LPKDVERLAAQPL------------HVLVLDEAQYIKNPNSKAAHAARELNARQRLCLSG 578
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
TP++N+L ELW+LF+F P LGD K F Y +PI EKR + L
Sbjct: 579 TPLENHLGELWSLFHFLLPGWLGDVKSFNRDYRVPI-----------EKRASEVRLQHLN 627
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 628 GRIKPFLLRRTKEQVATE--------LPPKTEIIHWVELNEAQRDVYETM---------- 669
Query: 592 DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
L + KK+ D + K A + ++++L +L D
Sbjct: 670 ------RLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLV--------NDA 713
Query: 652 FQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTT 711
+ S K+ ++ +LD+L EG +L+FSQ ML LI+ + +G ++ + G T
Sbjct: 714 VPPTRGSTSGKLDSLMEMLDELFEEGRRILLFSQFTSMLALIEVELKKRGVEYALLTGQT 773
Query: 712 KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
+ DR V DFQ G IFL++ + GG+GL LT+AD VI DP WNP+T+NQ+ DRAY
Sbjct: 774 R--DRRAPVKDFQSGKRQ-IFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAY 830
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
RIGQ+K V VY+++ GTVEEKI Q K L
Sbjct: 831 RIGQEKPVFVYKMIARGTVEEKIQHLQKEKSDL 863
>gi|440300538|gb|ELP92985.1| hypothetical protein EIN_051500 [Entamoeba invadens IP1]
Length = 1524
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 175/524 (33%), Positives = 268/524 (51%), Gaps = 55/524 (10%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKRALVV 358
I L P+Q +G+ WL L+ GIL DDMGLGKT+Q +C L H+ +++V
Sbjct: 978 INGKLRPYQLDGISWLLFLNKYCINGILCDDMGLGKTLQTLCMLLT--VHAEAEYPSMIV 1035
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P TL HW E+ A + ++ + + + L+ K +L+ +Y+++R++ S
Sbjct: 1036 CPPTLTGHWKHEIEAFINTNDLKGIIYSGSAKERIHILSGLKSKDILIASYEMIRHDLDS 1095
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNL 478
+ F Y +LDEGH+IKNP T+ +++ +I S HR+I++GTPIQNN+
Sbjct: 1096 FKNKRF------------TYCVLDEGHIIKNPKTKLTQAVKQIMSLHRLILTGTPIQNNV 1143
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
ELW+LF+F P LG K F E+Y PIL D + + ++R G V ++L ++ P+
Sbjct: 1144 LELWSLFDFLMPGFLGTEKEFSERYSKPILAAKDSASPEDQER-GVIVMEKLHRQVLPFI 1202
Query: 539 LRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS---EIVLSAFDGSP 595
LRRLK V + L K + ++ Q+ LY+ F ++ E ++ D S
Sbjct: 1203 LRRLKESVLQD--------LPPKIIQDYYCDMSPVQKMLYQEFESTNDVEEMVQKKDESA 1254
Query: 596 ------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEK 649
LT +++C HP L VLD M DA L A+
Sbjct: 1255 KQKNHIFQILTYFRRLCVHPKL--------VLDDNHPMKAKVDAYLK-------AEGKTI 1299
Query: 650 DDFQEQHDNISCKISFILSLLDKLIPEG-HNVLIFSQTRKMLNLIQESIGSKGYKFL--- 705
DD ++ + + + K +G H VLIF+Q L LI+E I K + ++
Sbjct: 1300 DDISNSPKLLALEELLKMCNIGK---DGEHRVLIFAQLNVTLELIEEQIFKKSFPYISYY 1356
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
R+DG+ R +IV F+ + LLT++VGGLGL LT AD VI ++ WNP+ D Q
Sbjct: 1357 RLDGSVPTHKRTEIVEKFKNDPTIDVLLLTTRVGGLGLNLTAADIVIFMEHDWNPTKDLQ 1416
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
++DRA+R+GQ K V VYRL+ T+EE+I Q FK + T
Sbjct: 1417 AMDRAHRLGQNKVVNVYRLIVRQTLEERIMNLQEFKTKIANTVV 1460
>gi|449301382|gb|EMC97393.1| hypothetical protein BAUCODRAFT_68199 [Baudoinia compniacensis UAMH
10762]
Length = 1411
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 172/522 (32%), Positives = 268/522 (51%), Gaps = 77/522 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRALVV 358
IG L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L R LV+
Sbjct: 540 IGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKRQFGPYLVI 599
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S K Y G + + + Q D VLLTTY+ +
Sbjct: 600 VPLSTLTNWNSEFEKWAPSVKRIVYKGPPNQRKNQQQQIRYGDFQVLLTTYEFI------ 653
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + ++ + + +R+I++GTP+QNN
Sbjct: 654 ------IKDRPVLSKVKWLHMIVDEGHRMKNAGSKLSSTITQYYHTRYRLILTGTPLQNN 707
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P G D +L+ E+++ V + L + ++
Sbjct: 708 LPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDNMSLNEEEQL--LVIRRLHKVLR 765
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ +++ Q +LY+ + +++I+++ G
Sbjct: 766 PFLLRRLKKDV--EKD------LPDKQERVIKCNMSALQAKLYKQLVTHNKIMVNDDKGR 817
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP A L L A E
Sbjct: 818 KTGMRGLSNMLMQLRKLCNHPF---------VFEEVEEQMNP--AKLTNDLIWRTAGKFE 866
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
LLD+++P+ GH VL+F Q +++N++++ + + K+
Sbjct: 867 --------------------LLDRILPKFEKTGHRVLMFFQMTQIMNIMEDYMRLRNMKY 906
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
LR+DG+TKA DR ++ F AP FLL+++ GGLGL L AD VI+ D WN
Sbjct: 907 LRLDGSTKADDRSDLLKVFN----APNSDIFCFLLSTRAGGLGLNLQTADTVIIFDSDWN 962
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
P D Q+ DRA+RIGQK +V + RL+T G+VEEKI + FK
Sbjct: 963 PHQDLQAQDRAHRIGQKNEVRILRLITTGSVEEKILERAQFK 1004
>gi|350401631|ref|XP_003486213.1| PREDICTED: ATP-dependent helicase brm-like [Bombus impatiens]
Length = 1340
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 274/557 (49%), Gaps = 82/557 (14%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
+++ M+ GK+ +Q +GL WL SL GIL D+MGLGKT+Q + L +
Sbjct: 514 QASIMVNGKLKE----YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKK 569
Query: 351 LIKRA-LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
+ L++ P + LS+W+ E S + Y G+ R + Q VLLTTY
Sbjct: 570 KVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPANRRAIQSQMRATKFNVLLTTY 629
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRII 468
+ V I D+A W YMI+DEGH +KN + + L + HR++
Sbjct: 630 EYV------------IKDKAVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLL 677
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
++GTP+QN L ELWAL NF P + F++ + P +K L+ E+ I + +
Sbjct: 678 LTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI--LIIR 735
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
L + ++P+ LRRLK EV + L K E I+ ++ Q+ LY+ + ++L
Sbjct: 736 RLHKVLRPFLLRRLKKEV--------ESQLPDKVEYIIKCEMSGLQKVLYKHMQSKGVLL 787
Query: 589 SAFDGSP------------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
+ DGS + + L+K+C+HP + A+
Sbjct: 788 T--DGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMF--------------------QAIE 825
Query: 637 EKLAMHIAD-----VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
EK H+ V D ++ S K + +L KL H VL+F Q +++
Sbjct: 826 EKYCEHVGTQGSGIVTGPDLYR-----ASGKFELLDRILPKLKVTNHRVLLFCQMTQLMT 880
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADR 750
++++ + +G+K+LR+DG TKA DR ++ F + G +FLL+++ GGLGL L AD
Sbjct: 881 IMEDYLNWRGFKYLRLDGATKAEDRGGLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADT 940
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFK 801
VI+ D WNP D Q+ DRA+RIGQK +V V RLMT +VEE+I Y+ ++I +
Sbjct: 941 VIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVIRLMTVNSVEERILAAAKYKLNMDEKIIQ 1000
Query: 802 GGLFKTATEHKEQIRYF 818
G+F + E+ ++
Sbjct: 1001 AGMFDQKSTGSERQQFL 1017
>gi|422660942|ref|ZP_16723343.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331019536|gb|EGH99592.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 918
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 259/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 436 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 491
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 492 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDCDLILTTYA 547
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 548 LLPRDMEMLEKQPL------------HVLILDEAQYIKNPNSKAAQAARNLTARQRLCLS 595
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I + ++ L L
Sbjct: 596 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRL-----------HHL 644
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 645 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 686
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L H V K
Sbjct: 687 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQ 738
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 739 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 791
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 792 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 848
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 849 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882
>gi|429851172|gb|ELA26385.1| DNA repair and recombination protein rad54 [Colletotrichum
gloeosporioides Nara gc5]
Length = 806
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 179/570 (31%), Positives = 284/570 (49%), Gaps = 72/570 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++++ + + G I+ D+MGLGKT+Q L
Sbjct: 203 PRVPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLW 262
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A+V P +L+ +W EL L A F K + EL
Sbjct: 263 TLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVK-WLGADAITPFAIDGKASKEELTRQ 321
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + V++ +Y+ +R N + L+ + M+ DEGH +K
Sbjct: 322 LRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI------------GLMLCDEGHRLK 369
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + R+I+SGTPIQN+L E +AL +F P+LLG F++++ELPIL
Sbjct: 370 NGDSQTFSALNNLNVTRRVILSGTPIQNDLSEYFALISFANPDLLGSRLEFRKRFELPIL 429
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A + +++ G EL + + +RR N++ S L K E +V+
Sbjct: 430 RGRDADASEADRKKGDECLSELLGIVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 481
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G +
Sbjct: 482 NLAPFQLDLYNYFITSPSIQALLRGKGSQPLKAINILKKLCNHPDLLN---LGDDLPGSE 538
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
+ PED E + + +I S + +LD+++ +
Sbjct: 539 NCY-PEDYVPKEA--------------RGRDRDIKPWYSGKMQVLDRMLARIRQDTNDKI 583
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQV 738
++ S L+L ++ S+ Y LR+DGT + R K+V+ F EG+ +FLL+S+
Sbjct: 584 VLISNYTSTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNNPEGEEF-VFLLSSKA 642
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 643 GGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQ 702
Query: 799 IFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 703 SHKQSLSSCVVDSAEDVERHFSLDSLRELF 732
>gi|288958707|ref|YP_003449048.1| hypothetical protein AZL_018660 [Azospirillum sp. B510]
gi|288911015|dbj|BAI72504.1| hypothetical protein AZL_018660 [Azospirillum sp. B510]
Length = 1160
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 252/525 (48%), Gaps = 66/525 (12%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH-SRLIKRALVVAPKTLLS 365
+QR GL W+ SL GIL DDMGLGKT Q +A H RL + LVV P +L+
Sbjct: 694 YQRAGLAWMQSLRANNVAGILADDMGLGKTAQTLAHIAMEEHEGRLTEPCLVVVPTSLVP 753
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W E ++ G + E+ +++TTY +V + L+ +
Sbjct: 754 NWTAEAERFTPHLRVVVLHGVDRHGKLAEIDRA----HIVVTTYGVVARDLDLLKRLT-- 807
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALF 485
W ++LDE IKNP + +++ +P+ HR+ +SGTP++NNL ELW+ F
Sbjct: 808 ----------WHMIVLDEAQAIKNPDGKATRAVAALPARHRLCLSGTPVENNLGELWSQF 857
Query: 486 NFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNE 545
F P LLGD K F ++Y +PI EKR + A L RI+P+ LRR K
Sbjct: 858 AFLMPGLLGDRKEFGKRYRVPI-----------EKRGDNTRANLLMRRIRPFLLRRTKEA 906
Query: 546 VFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--EIVLSAFDGSPLAALTILK 603
V E L K E++V + L QR LYE S E V +A S
Sbjct: 907 VAKE--------LPPKTEVVVRIDLERDQRDLYETIRLSVNETVRAALAAS--------- 949
Query: 604 KICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKI 663
+ ++ + +D++L +L IA + K S K+
Sbjct: 950 ---------GRGLGQNTIAVIDALLKLRQVCCDPRLLKSIAALGGKA-------RPSAKL 993
Query: 664 SFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDF 723
+ ++ +++PEG +LIFSQ ML+LI+ + ++ + G T DR VN F
Sbjct: 994 HALTGMVKEMVPEGRRILIFSQFTTMLDLIKLELEKAAIPYVELTGRTL--DRALPVNRF 1051
Query: 724 QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYR 783
Q +V P+FL++ + GG GL LT AD VI DP WNP+ ++Q+ DRAYRIGQ K V VY+
Sbjct: 1052 QNREV-PVFLISLKAGGRGLNLTAADTVIHYDPWWNPAAEDQATDRAYRIGQDKPVFVYK 1110
Query: 784 LMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLS 828
L+ TVEE+I Q KG L E K + D+ LL
Sbjct: 1111 LIAANTVEERILDLQRRKGSLSAATIEGKGLVSALDGGDIDYLLG 1155
>gi|19115202|ref|NP_594290.1| DNA repair protein [Schizosaccharomyces pombe 972h-]
gi|3123262|sp|P41410.2|RAD54_SCHPO RecName: Full=DNA repair protein rhp54; AltName: Full=RAD54 homolog
1
gi|2239180|emb|CAB10100.1| Rad54 homolog Rhp54 [Schizosaccharomyces pombe]
Length = 852
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 290/563 (51%), Gaps = 72/563 (12%)
Query: 299 KIGNMLFPHQREGLRWLWSL------HCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-- 350
K+ +L PHQ EG+++L+ C G I+ D+MGLGKT+Q L L
Sbjct: 259 KLARILRPHQIEGVKFLYKCVTGRIDRC-ANGCIMADEMGLGKTLQCIALLWTLLKQSPQ 317
Query: 351 ----LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD----- 401
I++A++ P +L+ +W EL L F K+ + EL LQ
Sbjct: 318 AGKPTIEKAIITCPSSLVKNWANELVK-WLGKDAITPFILDGKSSKQELIMALQQWASVH 376
Query: 402 -----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+ VL+ +Y+ +R+ + L + E G ++ DEGH +KN +
Sbjct: 377 GRQVTRPVLIASYETLRSYVEHLNNA-----EIG-------MLLCDEGHRLKNSDSLTFT 424
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
+L ++ R+I+SGTPIQN+L E ++L NF P LLG + F++ YE+PIL+G D
Sbjct: 425 ALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGT 484
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+++K G A EL + + + +RR N++ S L K E +V+ L+ Q
Sbjct: 485 EKDKENGDAKLAELAKIVNRFIIRR-TNDIL-------SKYLPVKYEHVVFCNLSEFQLS 536
Query: 577 LYEAFLNS-EI--VLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDA 633
LY+ F+ S EI +L PL A+ +LKKIC+HP LL ED L+G +++ P
Sbjct: 537 LYKHFITSPEINKILRGTGSQPLKAIGLLKKICNHPDLLN--LTED-LEGCEALFPPGFI 593
Query: 634 ALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNVLIFSQTRK 688
+ + + NI +S + +L++++ + +++ S
Sbjct: 594 P---------------RELRGRDRNIDSSLSGKMLVLERMLYQIKQETDDKIVLISNYTS 638
Query: 689 MLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTK 747
L+L ++ ++GYK LR+DGT + R ++V+ F + + A +FLL+S+ GG G+ L
Sbjct: 639 TLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINLIG 698
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
A+R+I+ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K L
Sbjct: 699 ANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSC 758
Query: 808 ATEHKEQI-RYFSQQDLRELLSL 829
+ + + R+FS +LR+L L
Sbjct: 759 VVDEAQDVERHFSLDNLRQLFQL 781
>gi|299753600|ref|XP_002911886.1| Mot1 [Coprinopsis cinerea okayama7#130]
gi|298410374|gb|EFI28392.1| Mot1 [Coprinopsis cinerea okayama7#130]
Length = 1929
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 272/557 (48%), Gaps = 88/557 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P K+ L +Q++G+ WL L GIL DDMGLGKT+Q LA R K
Sbjct: 1331 YQIPVKVNAELRKYQQDGVNWLAFLAKYQLHGILCDDMGLGKTLQSICILASKHQERRDK 1390
Query: 354 R------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+L++ P TL HW E+ + K Y G + R L LQ
Sbjct: 1391 YRETKSPDAVHLPSLIICPPTLTGHWYYEILKYVENLKPILYTGNA-RERSRMLPK-LQQ 1448
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+Y++VRN D A + W Y ILDEGH+IKN T+ K++ I
Sbjct: 1449 HDVVITSYEVVRN------------DIANLESLKWLYCILDEGHVIKNAKTKLTKAVKSI 1496
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I+SGTPIQNN+ ELW+LF+F P LG F E++ PIL D ++
Sbjct: 1497 QAQHRLILSGTPIQNNVLELWSLFDFLMPGFLGTESSFNERFGKPILSNRDGK--NKNAE 1554
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
+ + L +++ P+ LRRLK +V ++ L K + L+ Q+ LY+ F
Sbjct: 1555 AAALALEALHKQVLPFLLRRLKEDVLND--------LPPKIIQDYYCELSELQKNLYDDF 1606
Query: 582 ------------LNSEIVLSAFDGSP-----LAALTILKKICDHPLLL------TKRAAE 618
L S++V G P +L L+K+C+HP L+ TK A E
Sbjct: 1607 SKSKAGTATGKTLKSDVVEK---GDPAQQHVFQSLQYLRKLCNHPALVLRDEEATKVALE 1663
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADV-----------AEKDDFQEQHDNISCKISFIL 667
+ DS+ + ++A L + D ++K + + + S S
Sbjct: 1664 NAKLTKDSLRDIQNAPKLLALKQLLMDCGIGSPPALAADSQKSELIDAPTDTSGTFS--- 1720
Query: 668 SLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQ 724
H VLIF Q ++ML++I+ + ++R+DG+T A+ R IV F
Sbjct: 1721 ---------QHRVLIFCQMKQMLDIIETDLFKPHMPSVTYMRLDGSTDANKRHAIVQTFN 1771
Query: 725 EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRL 784
LLT+ VGGLGLTLT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL
Sbjct: 1772 SDPSIDCLLLTTHVGGLGLTLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRL 1831
Query: 785 MTCGTVEEKIYRKQIFK 801
+T GT+EEKI Q FK
Sbjct: 1832 ITKGTLEEKIMGLQRFK 1848
>gi|357617374|gb|EHJ70751.1| helicase [Danaus plexippus]
Length = 1711
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 166/536 (30%), Positives = 266/536 (49%), Gaps = 69/536 (12%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLLS 365
+Q +GL WL SL GIL D+MGLGKT+Q + L + + L++ P + LS
Sbjct: 890 YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLS 949
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W+ E + ++ Y G+ R + Q VLLTTY+ V I
Sbjct: 950 NWVLEFEKWAPTVQVVSYKGSPQSRRLSQSQLRASKFNVLLTTYEYV------------I 997
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKELWAL 484
D++ W YMI+DEGH +KN + + L + HR++++GTP+QN L ELWAL
Sbjct: 998 KDKSTLAKIHWKYMIIDEGHRMKNHHCKLTQVLNTHYVAPHRLLLTGTPLQNKLPELWAL 1057
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
NF P + F++ + P +K L+ E+ I + + L + ++P+ LRRLK
Sbjct: 1058 LNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI--LIIRRLHKVLRPFLLRRLKK 1115
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--------- 595
EV + L K E I+ ++ QR LY+ + ++L+ DGS
Sbjct: 1116 EV--------ESQLPDKVEYIIKCEMSGLQRVLYKHMQSKGVLLT--DGSEKGNKGKGGA 1165
Query: 596 ---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
+ + L+K+C+HP + + EK HI
Sbjct: 1166 KALMNTIVQLRKLCNHPFMFQH--------------------IEEKFCDHIGTGGGIVTG 1205
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
+ + +S K + +L KL GH VL+F Q + + +I++ + +G+++LR+DG TK
Sbjct: 1206 PDLY-RVSGKFELLDRILPKLKQTGHRVLVFCQMTQCMTIIEDYLSWRGFQYLRLDGMTK 1264
Query: 713 ASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
A DR +++ F + G IFLL+++ GGLGL L AD VI+ D WNP D Q+ DRA+
Sbjct: 1265 AEDRGELLKKFNDVGSDYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1324
Query: 772 RIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQIRYF 818
RIGQ+ +V V RLMT +VEE+I Y+ +++ + G+F + E+ ++
Sbjct: 1325 RIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFL 1380
>gi|241950361|ref|XP_002417903.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and
recombination protein, putative [Candida dubliniensis
CD36]
gi|223641241|emb|CAX45621.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and
recombination protein, putative [Candida dubliniensis
CD36]
Length = 839
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 176/567 (31%), Positives = 286/567 (50%), Gaps = 59/567 (10%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P ++ K+ +L PHQ G+++L+ + + KG I+ D+MGLGKT+Q +
Sbjct: 233 PDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARAKGCIMADEMGLGKTLQCLALMW 292
Query: 345 GLFHS-----RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVL 399
L R I++ ++V P +L+ +W E+ + T+ +L L
Sbjct: 293 TLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKSSDLGTAL 352
Query: 400 QD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
Q + VL+ +Y+ +R N L G+ E G M+ DEGH +KN
Sbjct: 353 QQWSTAQGRNIVRPVLIISYETLRRNVDKLAGT-----EVG-------LMLADEGHRLKN 400
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
+ +L + R+I+SGTPIQN+L E ++L NF P LG F++ YE ILR
Sbjct: 401 GDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNEFRKNYENAILR 460
Query: 510 GNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR 569
G D A D E+ G EL + + + +RR N++ S L K E +++
Sbjct: 461 GRDSTATDEERAKGDKKLGELSQMVSKFIIRR-TNDIL-------SKYLPIKYEYVLFTG 512
Query: 570 LTSCQRQLYEAFLNS-EI--VLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
L+ Q+ LY F+ S EI ++ PL A+ +LKK+C+HP D+LD D
Sbjct: 513 LSPMQKTLYNHFITSPEIKKLIKGIGSQPLKAIGMLKKLCNHP---------DLLDLPDD 563
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQ 685
+ D + + A ++ +E S K + L K+ E + +++ S
Sbjct: 564 IEGSADLIPDDYQSSIAGGSAGRN--REIQTWFSGKFLILERFLRKINKETDDKIVLISN 621
Query: 686 TRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGL 743
+ L+LI++ K Y LR+DGT + R K+V+ F + + P IFLL+S+ GG G+
Sbjct: 622 YTQTLDLIEKMCRYKKYGVLRLDGTMNINKRQKLVDKFNDPN-GPEFIFLLSSKAGGCGI 680
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
L A+R++++DP WNP++D Q++ R +R GQKKD +YRL++ GT+EEKI+++Q K
Sbjct: 681 NLIGANRLVLIDPDWNPASDQQALARVWRDGQKKDCFIYRLISTGTIEEKIFQRQSMKMS 740
Query: 804 LFKTATEHKEQI-RYFSQQDLRELLSL 829
L + KE + R FS ++LR+L
Sbjct: 741 LSSCVVDEKEDVERLFSSENLRQLFKF 767
>gi|344231402|gb|EGV63284.1| hypothetical protein CANTEDRAFT_106747 [Candida tenuis ATCC 10573]
Length = 817
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 187/611 (30%), Positives = 302/611 (49%), Gaps = 80/611 (13%)
Query: 249 NRPDRRDGKLNKSAHSGLVNVL--DDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFP 306
N+ ++ + H L +L Y DD+ P ++ ++ +L P
Sbjct: 186 NKENKEPATKKRKVHKSLAEILGISKYKDDAS---------KHPNVPVVIDPRLAKILRP 236
Query: 307 HQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRAL 356
HQ EG+++L+ + + KG I+ D+MGLGKT+Q + L + I + +
Sbjct: 237 HQVEGVKFLYRCTSGLIDPKAKGCIMADEMGLGKTLQCIALMWTLLKQSPRGRKTISKCI 296
Query: 357 VVAPKTLLSHWIKE---------LTAVGLSAKIREYFGTCVKTRQYEL---QYVLQDKGV 404
+V P +L+ +W E LT + + K + +Q+ + + V+ + V
Sbjct: 297 IVCPSSLVRNWANEIIKWLGEGVLTPLAIDGKSVKNSEIGDSLKQWSVASGRNVV--RPV 354
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
L+ +Y+ +R + L G+ E G M+ DEGH +KN + +L E+
Sbjct: 355 LIISYETLRRHVDKLSGT-----EVG-------LMLADEGHRLKNGDSLTFNALNELRCE 402
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
R+I+SGTPIQN+L E ++L NF P LG F+ YE ILRG D A D+E+ G
Sbjct: 403 RRVILSGTPIQNDLSEYFSLLNFSNPNYLGTRNDFRRNYENDILRGRDADASDKERESGD 462
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS 584
EL + + +RR N++ S L K E ++++ L+ Q +LY F+ S
Sbjct: 463 KKLNELTTLVSRFIIRR-TNDIL-------SKYLPIKYEHVIFVNLSPLQTKLYNFFITS 514
Query: 585 -EI--VLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAM 641
EI +L PL A+ +LKK+C+HP LL ED LDG ++ P+D ++
Sbjct: 515 PEIKKLLKGHGSQPLKAIGLLKKLCNHPNLLN--LPED-LDGCQELM-PDDYDYKKR--- 567
Query: 642 HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-GHNVLIFSQTRKMLNLIQESIGSK 700
E +S K S + L KL E G +++ S + L+LI+ K
Sbjct: 568 ------------EVQTWLSGKFSILERFLYKLHHETGDKIVLISNYTQTLDLIERMCRVK 615
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
Y LR+DGT + R K+V+ F + D IFLL+S+ GG G+ L A+R++++DP WN
Sbjct: 616 RYGNLRLDGTMNINKRQKLVDRFNDPDGKEFIFLLSSKAGGCGINLIGANRLVLIDPDWN 675
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYF 818
P+ D Q++ R +R GQKKD +YR ++ GT+EEKI+++Q K L + K + R F
Sbjct: 676 PAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKVDVERLF 735
Query: 819 SQQDLRELLSL 829
S +L++L
Sbjct: 736 SADNLKQLFQF 746
>gi|374108456|gb|AEY97363.1| FAER375Cp [Ashbya gossypii FDAG1]
Length = 1288
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 274/543 (50%), Gaps = 82/543 (15%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR----A 355
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + L+ +K+
Sbjct: 453 VGGTLKEYQIRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYE---VKKDSGPF 509
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
LV+ P + +++W E S Y GT + R + Q + D VLLTTY+ +
Sbjct: 510 LVIVPLSTITNWTLEFEKWAPSLTTVIYKGTPNQRRSLQHQVRIGDFDVLLTTYEYI--- 566
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPI 474
++ S ++ W +MI+DEGH +KN ++ + +L + HR+I++GTP+
Sbjct: 567 ---IKDRSLLAKHE------WSHMIIDEGHRMKNAQSKLSYTLTHYYKTRHRLILTGTPL 617
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
QNNL ELWAL NF P++ +K F E + P + L+ + V + L + +
Sbjct: 618 QNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFSNTGGQEKLELTEEEALLVIRRLHKVL 677
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFD 592
+P+ LRRLK EV E D L K E +V +L+ Q QLY+ L N+ V + +
Sbjct: 678 RPFLLRRLKKEV--EKD------LPDKVEKVVKCKLSGLQHQLYQQMLKHNALFVGAGTE 729
Query: 593 GSPLAAL-------TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
G+ + L+KIC+HP V D ++ ++NP
Sbjct: 730 GATKGGIKGLNNKIMQLRKICNHPF---------VFDEVEGVVNPTRT------------ 768
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKG 701
+ ++ ++S LLD+++P+ GH VL+F Q ++++++++ + K
Sbjct: 769 ----------NSSLLYRVSGKFELLDRVLPKFKATGHRVLMFFQMTQVMDIMEDFLQMKN 818
Query: 702 YKFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
K++R+DG TKA +R ++N F D FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 819 LKYMRLDGATKAEERTGMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNP 878
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEH 811
D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F +
Sbjct: 879 HQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTA 938
Query: 812 KEQ 814
+EQ
Sbjct: 939 EEQ 941
>gi|50546160|ref|XP_500607.1| YALI0B07513p [Yarrowia lipolytica]
gi|49646473|emb|CAG82840.1| YALI0B07513p [Yarrowia lipolytica CLIB122]
Length = 807
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 181/570 (31%), Positives = 286/570 (50%), Gaps = 66/570 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P ++ K+ +L PHQ EG+++L+ ++ + G I+ D+MGLGKT+Q L
Sbjct: 201 PEVPVVIDPKLAKILRPHQVEGVKFLYRATTGLINPKAHGCIMADEMGLGKTLQCIALLW 260
Query: 345 GLFHSR-----LIKRALVVAPKTLLSHWIKELT-----------AVGLSAKIREYFGTCV 388
L I +A+VV P +L+ +W E AV S K E
Sbjct: 261 TLLKQSPQGKGTISKAIVVCPSSLVRNWAAEFVKWLGEGVVVPYAVDGSQKPAELTAGLR 320
Query: 389 KTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
+ + E + V + VL+ +YD +R ++ S E G ++ DEGH +K
Sbjct: 321 QWAEAEGRKV--TRPVLIISYDTLRRQVGAIADS-----EVG-------LLLADEGHKLK 366
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L ++ R+I+SGTPIQN+L E ++L NF P LLG F++ YE+PIL
Sbjct: 367 NGDSQTFTALNQLNVKRRVILSGTPIQNDLLEYFSLLNFSNPGLLGTKGEFRKNYEIPIL 426
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
+G D D++ A E+ + P +RR N++ S L K E +V+
Sbjct: 427 KGRDADGTDKDVEKAEAKLLEMASIVSPLIIRR-TNDIL-------SKYLPVKYEHVVFC 478
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG-------SPLAALTILKKICDHPLLLTKRAAEDVL 621
L Q+ LY F S+ S G + L A+ ILKK+C+HP LL D +
Sbjct: 479 NLAPFQKSLYVQFRTSKEARSLLKGEKSSEGTTTLNAIGILKKLCNHPDLLK---LPDEI 535
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-V 680
+G + P+D A ++ D+ + + S K + +L + E ++ +
Sbjct: 536 EGCRKVF-PDDYAPPDERGSRDRDI---------YPHFSAKFLILERMLRSINAETNDKI 585
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
+I S L+LI++ + Y LR+DGT + R K+V F + + IFLL+S+ G
Sbjct: 586 VIISNYTATLDLIEKMCRQRRYGCLRLDGTMNINKRAKLVTQFNDPEGQEFIFLLSSKAG 645
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G GL L A+R+I++DP WNP+ D Q++ R +R GQKKD VYRL+ GT+EEKI+++Q
Sbjct: 646 GCGLNLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFVYRLIATGTIEEKIFQRQS 705
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELLS 828
K L + + + R++S +LREL S
Sbjct: 706 MKQSLSTCVVDEVQDVERHYSMSNLRELFS 735
>gi|45190977|ref|NP_985231.1| AER375Cp [Ashbya gossypii ATCC 10895]
gi|44984045|gb|AAS53055.1| AER375Cp [Ashbya gossypii ATCC 10895]
Length = 1288
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 274/543 (50%), Gaps = 82/543 (15%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR----A 355
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + L+ +K+
Sbjct: 453 VGGTLKEYQIRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYE---VKKDSGPF 509
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
LV+ P + +++W E S Y GT + R + Q + D VLLTTY+ +
Sbjct: 510 LVIVPLSTITNWTLEFEKWAPSLTTVIYKGTPNQRRSLQHQVRIGDFDVLLTTYEYI--- 566
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPI 474
++ S ++ W +MI+DEGH +KN ++ + +L + HR+I++GTP+
Sbjct: 567 ---IKDRSLLAKHE------WSHMIIDEGHRMKNAQSKLSYTLTHYYKTRHRLILTGTPL 617
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
QNNL ELWAL NF P++ +K F E + P + L+ + V + L + +
Sbjct: 618 QNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFSNTGGQEKLELTEEEALLVIRRLHKVL 677
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFD 592
+P+ LRRLK EV E D L K E +V +L+ Q QLY+ L N+ V + +
Sbjct: 678 RPFLLRRLKKEV--EKD------LPDKVEKVVKCKLSGLQHQLYQQMLKHNALFVGAGTE 729
Query: 593 GSPLAAL-------TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
G+ + L+KIC+HP V D ++ ++NP
Sbjct: 730 GATKGGIKGLNNKIMQLRKICNHPF---------VFDEVEGVVNPTRT------------ 768
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKG 701
+ ++ ++S LLD+++P+ GH VL+F Q ++++++++ + K
Sbjct: 769 ----------NSSLLYRVSGKFELLDRVLPKFKATGHRVLMFFQMTQVMDIMEDFLQMKN 818
Query: 702 YKFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
K++R+DG TKA +R ++N F D FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 819 LKYMRLDGATKAEERTGMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNP 878
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEH 811
D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F +
Sbjct: 879 HQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTA 938
Query: 812 KEQ 814
+EQ
Sbjct: 939 EEQ 941
>gi|310795007|gb|EFQ30468.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 852
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 177/569 (31%), Positives = 283/569 (49%), Gaps = 70/569 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++++ + + G I+ D+MGLGKT+Q L
Sbjct: 249 PRVPVVIDPRLAKVLRPHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLW 308
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A+V P +L+ +W EL L A F K + EL
Sbjct: 309 TLLKQSPEAGKSTIQKAIVACPSSLVRNWANELVK-WLGADAITPFAIDGKASKEELTRQ 367
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + V++ +Y+ +R N + L+ + M+ DEGH +K
Sbjct: 368 LRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI------------GLMLCDEGHRLK 415
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + R+I+SGTPIQN+L E +AL +F P+LLG F++++ELPIL
Sbjct: 416 NGDSQTFNALNSLNVTRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFELPIL 475
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A + +++ G EL + + +RR N++ S L K E +V+
Sbjct: 476 RGRDADASEIDRKKGDECLSELLGIVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 527
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G +
Sbjct: 528 NLAPFQLDLYNYFITSPEIQALLRGKGSQPLKAINILKKLCNHPDLLN---IADDLPGSE 584
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
+ P+D E + + +I S + +LD+++ +
Sbjct: 585 NCY-PDDYVPKEA--------------RGRDRDIKPWYSGKMQVLDRMLARIRQDTNDKI 629
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
++ S + L+L ++ S+ Y LR+DGT + R K+V+ F D +FLL+S+ G
Sbjct: 630 VLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSKAG 689
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 690 GCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQS 749
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 750 HKQSLSSCVVDSAEDVERHFSLDSLRELF 778
>gi|308163064|gb|EFO65427.1| DNA repair and recombination protein Rhp26p [Giardia lamblia P15]
Length = 930
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 162/555 (29%), Positives = 279/555 (50%), Gaps = 93/555 (16%)
Query: 298 GKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALV 357
G + L +Q+ G+RW+ L GG+L D+ G+GKT+Q L+ LF S ++ L+
Sbjct: 173 GPLYASLRKYQQTGVRWILRLFSLNSGGLLADEPGVGKTVQTIVALSSLFLSGKLRHVLL 232
Query: 358 VAPKTLLSHWIKEL-----------------TAVGLSAKIREYFGTCVKTRQYELQ---- 396
V P T+ + W++ + A G+S + + + + + +L+
Sbjct: 233 VVPSTIQTQWLEMVRNWWPLTRCILLTRASAVAYGISESANDIYTSFLSSLAADLRKCSS 292
Query: 397 ----------YVLQDKGVLLTTYDIVRNNSKSLRG--SSFISDEAGDDDAIWDYMILDEG 444
+ + + +++YD N+ +L + Y I DE
Sbjct: 293 TTCTYAGKTMTIGECGAIFISSYDFAMRNAAALNTFFQVLTPKSLSSQEPCIQYAIFDEV 352
Query: 445 HLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYE 504
H +KN T R K+L + ++ IS TP+QN+L E+++L F P +LGD F ++Y+
Sbjct: 353 HYLKNTETIRIKALRALKIVCKLGISATPVQNSLVEIYSLITFIQPNILGDYDSFLQEYD 412
Query: 505 LPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEM 564
+PI +G+ +++ + + +++A+ L R++PY LRRLK++V +L K E
Sbjct: 413 IPIRKGSMENSNYEDISLAASLAQRLANRLKPYILRRLKSDV--------ERSLPPKVEH 464
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLS----------AFDGS----PLAALTILKKICDHPL 610
+V++RL+ Q +LY L+S+ ++ +F G +A L L+ ICDHP
Sbjct: 465 LVFIRLSDAQEKLYIQLLSSDETITKLKQLSATSRSFGGGITKLTMAKLIQLQHICDHPS 524
Query: 611 LLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL 670
LL+ +++D + L E SCK+++++ L
Sbjct: 525 LLSTASSDD-------------SELCES---------------------SCKLTYLMEQL 550
Query: 671 DKLIPEGHN-VLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEG 726
L + H+ VL+F Q R MLN+++ I S +LR+DG R +++ F
Sbjct: 551 TTLWNQSHDKVLVFCQGRMMLNIVERIILETASFKNAYLRMDGNIPVDARPALISRFSTD 610
Query: 727 DVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMT 786
+FLLT++VGGLGL LT A+ V +++P WNP+ D+QSV+R +RI Q K V+VY++ T
Sbjct: 611 PQIRLFLLTTRVGGLGLNLTAANHVFLLNPNWNPTIDDQSVERCWRITQSKKVIVYKVFT 670
Query: 787 CGTVEEKIYRKQIFK 801
GT+EEKI+ +QI+K
Sbjct: 671 GGTIEEKIFNRQIYK 685
>gi|326431300|gb|EGD76870.1| BTAF1 protein [Salpingoeca sp. ATCC 50818]
Length = 1863
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 181/547 (33%), Positives = 270/547 (49%), Gaps = 70/547 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y LP +I L +Q+ GL W+ L+ GIL DDMGLGKT+Q +A H R K
Sbjct: 1272 YALPVRIRATLRSYQQTGLDWMMFLNKYQLHGILCDDMGLGKTLQSICVMAADHHERAEK 1331
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P L +HW E+ S + Y G + + ++ L D
Sbjct: 1332 FAQTKQADCQHLPSLVVCPSILTTHWRTEIHKFCDSLRPIVYAGP--RASRTRMRDTLAD 1389
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++ +Y+++RN+ + L+ +Y ILDEGH+I+N ++ A++ I
Sbjct: 1390 HDVVIMSYEMLRNDIEFLQTLHV------------NYCILDEGHIIRNAKSKIAQAAKAI 1437
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN ELW+LF+F P LG + FK +Y PIL D A ++
Sbjct: 1438 QSNHRLILSGTPIQNNALELWSLFDFLMPGFLGTAQQFKAQYSKPILAARDAKASKSDQE 1497
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ + L ++ P+ LRR+K +V DD L K L+ QR++YE+F
Sbjct: 1498 RGALALEALHRQVLPFLLRRVKEDVL--DD------LPPKIIQDYLCDLSGVQRRMYESF 1549
Query: 582 LNS-------EIVLSAFDGSP-------LAALTILKKICDHPLLLTKRAAEDVLDGMDSM 627
+ ++V + D AL LK++C HPL++ A+DV
Sbjct: 1550 GQTSQAQAAKDVVRAGHDSGDRKGGKHIFQALNFLKRVCSHPLMVK---ADDV------- 1599
Query: 628 LNPEDAALAEKLAMH---IADVAEKDDFQEQHDNIS-CKISFILSLLDKLIPEGHNVLIF 683
DA + +A H + DV H +S C I + + H LIF
Sbjct: 1600 ----DAKVRAHIAQHGINLHDVHHATKLAALHQLLSDCSIG-VSADATAAAASSHRALIF 1654
Query: 684 SQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
+ +++L+L+ + + + R+DG T R ++V +F + + LLT+ VGG
Sbjct: 1655 ATHKQLLSLVARDLFDRHMPALTYRRLDGDTPTHMRAEVVAEFNDDPTVDVLLLTTSVGG 1714
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LGL LT AD VI ++ WNP D Q++DRA+RIGQ + V VYRL+T T+EEKI Q F
Sbjct: 1715 LGLNLTGADTVIFLEHDWNPMKDLQAMDRAHRIGQGRTVNVYRLITRNTLEEKIMNLQRF 1774
Query: 801 KGGLFKT 807
K + T
Sbjct: 1775 KLNMANT 1781
>gi|425768693|gb|EKV07211.1| DsDNA-dependent ATPase Rad54, putative [Penicillium digitatum
PHI26]
gi|425775851|gb|EKV14096.1| DsDNA-dependent ATPase Rad54, putative [Penicillium digitatum Pd1]
Length = 862
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 178/573 (31%), Positives = 283/573 (49%), Gaps = 74/573 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
P+ ++ ++ +L PHQ EG+++L+ C G I+ D MGLGKT+Q
Sbjct: 255 PKVPVVIDPRLCKVLRPHQIEGVKFLY--RCVTGLVDKNANGCIMADGMGLGKTLQCITL 312
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL- 395
+ L I++ ++ P +L+ +W EL L F K + EL
Sbjct: 313 MWTLLKQSSEAGKTTIQKCVIACPSSLVGNWANELVK-WLGKDATTPFAIDGKATKAELI 371
Query: 396 ----QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
Q+ + + VL+ +Y+ +R + +L +D ++ DEGH
Sbjct: 372 TQIKQWAIASGRGIVRPVLIVSYETLRMYADTL------------NDTPIGLLLCDEGHR 419
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN + +L ++ R+I+SGTPIQN+L E +AL +F P LLG F++++ELP
Sbjct: 420 LKNKESLTWTALNQLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQAEFRKRFELP 479
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D D EK++G +EL + + +RR NE+ S L K E +V
Sbjct: 480 ILRGRDAAGTDEEKKLGDERLQELSGIVNKFIIRR-TNELL-------SKYLPVKYEHVV 531
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ ++ QR LY F+ S + S G PL A+ +LKK+C+HP LL A D L G
Sbjct: 532 FCNMSQFQRGLYNHFIKSPEIQSLLRGKGSQPLKAIGLLKKLCNHPDLLD--LAND-LPG 588
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GH 678
+ PED + D + + I S + +LD+++
Sbjct: 589 CEHTF-PEDYS--------------PPDTRGRDREIKSWYSGKMMVLDRMLARIRQDTND 633
Query: 679 NVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQ 737
+++ S + L+L ++ S+GY LR+DGT R K+V+ F + D +FLL+S+
Sbjct: 634 KIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNIKKRTKLVDKFNDPDGQEFVFLLSSK 693
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++
Sbjct: 694 AGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQR 753
Query: 798 QIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
Q K L + E + R+FS LREL
Sbjct: 754 QSHKQSLSSCVVDSAEDVERHFSLDSLRELFQF 786
>gi|50310529|ref|XP_455284.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644420|emb|CAG97992.1| KLLA0F04521p [Kluyveromyces lactis]
Length = 1344
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 170/551 (30%), Positives = 281/551 (50%), Gaps = 79/551 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL W+ SL+ GIL D+MGLGKT+Q ++ L+ + ++ LV+
Sbjct: 509 VGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVI 568
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S + Y G + + + + + V+LTTY+ +
Sbjct: 569 VPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYI------ 622
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L + +R+I++GTP+QNN
Sbjct: 623 ------IKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNN 676
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P++ +K F E + P + L+ + V + L + ++P+
Sbjct: 677 LPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGTQEKLEMTEEETLLVIRRLHKVLRPF 736
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFDGSP 595
LRRLK EV E D L K E +V +L+S Q+QLYE L N+ + + +G+
Sbjct: 737 LLRRLKKEV--EKD------LPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGAT 788
Query: 596 LAAL-------TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
A + L+KIC+HP V D +++++NP
Sbjct: 789 KAGIKGLNNKVMQLRKICNHPF---------VFDEVENVINP------------------ 821
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
++ +I ++S LLD+++P+ GH VL+F Q ++++++++ + + K+
Sbjct: 822 ----TRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKY 877
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
+R+DG TKA DR ++ F D FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 878 MRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD 937
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLF---KTATEH 811
Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F TA E
Sbjct: 938 LQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQ 997
Query: 812 KEQIRYFSQQD 822
+E +R + D
Sbjct: 998 EEFLRRLLEGD 1008
>gi|402223361|gb|EJU03425.1| DNA repair protein SNF2 family [Dacryopinax sp. DJM-731 SS1]
Length = 831
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 291/562 (51%), Gaps = 61/562 (10%)
Query: 300 IGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLAGLF------H 348
+G +L PHQ EG+++L+ G I+ D+MGLGKT+Q + L
Sbjct: 224 LGKVLRPHQVEGVKFLYKCTTGAIVENAYGCIMADEMGLGKTLQCIALMHTLLKQSPRAQ 283
Query: 349 SRLIKRALVVAPKTLLSHWIKELT-------AVGLSAKIREYFGTCVKTRQYELQYVLQ- 400
I +A++ P +L+ +W EL A G+ + + GT + + ++V
Sbjct: 284 KPTIDKAIIACPSSLVKNWGNELVKWLGKDGAPGILSVDNK--GTKAELIESVKRWVAAG 341
Query: 401 ----DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+ V++ +Y+ +R L ++ E G ++ DEGH +KN + +
Sbjct: 342 GRNVTQPVMIVSYETLRTLCAEL-----MNCEIG-------LLLCDEGHRLKNSDSLTFQ 389
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
+L + R+I+SGTPIQN+L E ++L NF P+ LG F++ +EL ILRG D A
Sbjct: 390 ALNGLKVQRRVILSGTPIQNDLSEYFSLLNFANPDYLGSRMEFRKNFELAILRGRDADAT 449
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
D+EK A KEL ER+ + +RR + + S L K E +V+ L+ Q
Sbjct: 450 DKEKENSEAKLKELAERVSKFIIRRTNDLL--------SKYLPVKYEHVVFCTLSPLQLA 501
Query: 577 LYEAFLNS---EIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDA 633
LY F+ S + +L PL A+ +LKK+C+HP LL ED L G DS+L PE
Sbjct: 502 LYRHFIKSPETQRLLRGQGSQPLKAINLLKKLCNHPELLN--LPED-LPGCDSVLPPEYG 558
Query: 634 -ALAEKLAMHIADVAEKDDFQEQHDNISC----KISFILSLLDKLIPEGHN-VLIFSQTR 687
+L + A+ +D + +++ C K + LD++ E ++ +++ S
Sbjct: 559 NSLYGGPKVSRAERGARD--RGMGEDVRCEWGGKFLVLERFLDRIKRETNDKIVLISNYT 616
Query: 688 KMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLT 746
+ L+L ++ SK Y F R+DGT R K+V+ F + + +FLL+S+ GG G+ L
Sbjct: 617 QTLDLFEKMCRSKRYGFFRLDGTMSVVKRQKLVDQFNDPEGKEFVFLLSSKAGGCGINLI 676
Query: 747 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK 806
A+R+I+ DP WNP+ D Q++ R +R GQKK+ VYR ++ GT+EEKI+++Q K L
Sbjct: 677 GANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQAQKQALSS 736
Query: 807 TATEHKEQI-RYFSQQDLRELL 827
+ KE R+FS DLR+L
Sbjct: 737 CVVDEKEDAERHFSADDLRKLF 758
>gi|157130680|ref|XP_001661961.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti]
gi|108881922|gb|EAT46147.1| AAEL002647-PA [Aedes aegypti]
Length = 791
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 178/576 (30%), Positives = 300/576 (52%), Gaps = 85/576 (14%)
Query: 297 PGKI----------GNMLFPHQREGLRWLWSLHCQGK-----GGILGDDMGLGKTMQICG 341
PGKI GN+L PHQREG+R+++ GK G I+ D+MGLGKT+Q
Sbjct: 123 PGKIQVHVMVDPLLGNILRPHQREGVRFMYEC-VTGKRGDFQGCIMADEMGLGKTLQCIT 181
Query: 342 FLAGLFHSR-----LIKRALVVAPKTLLSHWIKELTA-VGLSAKIREYFGTCVKTRQYEL 395
L L I +A++V P +L+ +W KE +G G + EL
Sbjct: 182 LLWTLLRQSPDCKPTINKAVIVCPSSLVKNWYKEFGKWLGCRVNCLAIDGGSKEHTTKEL 241
Query: 396 QYVLQDKG------VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
+ + ++ VL+ +Y+ R S L S E G ++ DEGH +KN
Sbjct: 242 EQFMANQSMRHGTPVLIISYETFRLYSHILNNS-----EVGA-------VLCDEGHRLKN 289
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
++L+ + + R+++SGTPIQN+L E ++L +F P +LG F+ ++E PILR
Sbjct: 290 CENLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSTNEFRRQFENPILR 349
Query: 510 GNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK----KNEMI 565
G D +A + E++ + +EL ++ +RR +SA L+K K EM+
Sbjct: 350 GQDANATESERQKATERLQELTAQVNRCMIRR------------TSALLTKYLPIKFEMV 397
Query: 566 VWLRLTSCQRQLYEAFLNSEIVLSAF--------DGSPLAALTILKKICDHPLLLTKRAA 617
V +++T Q +LY++FL S+ + + + L+ +T LKK+C+HP L+ ++
Sbjct: 398 VCVKMTEIQTELYKSFLQSDSIRRSMLEKAQVKASLTALSNITSLKKLCNHPDLVYEKIQ 457
Query: 618 EDVLDGMDSMLNPEDAALAEK-LAMHIADVAEKDDFQEQHDNISCKISFI-LSLLDKLIP 675
E DG ++ A K L + + + +F + + C ++ I ++ DK++
Sbjct: 458 ERA-DGFEN---------AHKILPSNYSSKELRPEFGGKLMVLDCMLASIKMNTDDKIV- 506
Query: 676 EGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLL 734
+ S + L+L ++ +GY ++R+DG+ R K+V++F + D IF+L
Sbjct: 507 ------LVSNYTQTLDLFEKLCRKRGYCYVRLDGSMTIKKRGKVVDEFNKPDSKEFIFML 560
Query: 735 TSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI 794
+S+ GG GL L A+R+++ DP WNP+ D Q++ R +R GQKK +YRL+ GT+EEKI
Sbjct: 561 SSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLATGTIEEKI 620
Query: 795 YRKQIFKGGLFKTATEHKEQ-IRYFSQQDLRELLSL 829
+++Q K L T ++ E R+F+Q DL++L L
Sbjct: 621 FQRQTHKKALSNTVVDNDEDGERHFTQDDLKDLFRL 656
>gi|260942759|ref|XP_002615678.1| hypothetical protein CLUG_04560 [Clavispora lusitaniae ATCC 42720]
gi|238850968|gb|EEQ40432.1| hypothetical protein CLUG_04560 [Clavispora lusitaniae ATCC 42720]
Length = 1563
Score = 256 bits (653), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 277/522 (53%), Gaps = 76/522 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
IG L +Q +GL+W+ SL GIL D+MGLGKT+Q LA L + I LV+
Sbjct: 702 IGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLAYLSEKKQISGPYLVI 761
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCV--KTRQYELQYVLQDKGVLLTTYDIVRNNS 416
P + L++W E + K Y GT V K Q++++ + + VLLTT++ V
Sbjct: 762 VPLSTLTNWNLEFEKWAPTLKKITYKGTPVQRKVMQHDIKSL--NFQVLLTTFEYV---- 815
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQ 475
I D++ W +MI+DEGH +KN +++ +++L S +R+I++GTP+Q
Sbjct: 816 --------IKDKSLLSKIKWVHMIIDEGHRMKNTNSKLSETLTHYYHSDYRLILTGTPLQ 867
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRER 533
NNL ELWAL NF P++ K F E + P G DK L E+ + V + L +
Sbjct: 868 NNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANNGGQDKIELSEEETL--LVIRRLHKV 925
Query: 534 IQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG 593
++P+ LRRLK +V E D L K E ++ +++S Q +LY L + + G
Sbjct: 926 LRPFLLRRLKKDV--EKD------LPNKVEKVIKCKMSSLQSKLYRMMLKYNALFTG-GG 976
Query: 594 SPLAALTI---------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA 644
+ TI L+KIC+HP V + +++++NP+
Sbjct: 977 TGQKPNTIKNANNQLMQLRKICNHPF---------VYEEVENLINPQ------------- 1014
Query: 645 DVAEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSK 700
E +D I +++ LLD+++P+ GH VL+F Q ++++++++ + +
Sbjct: 1015 --------AETNDTI-WRVAGKFELLDRVLPKFKKTGHRVLLFFQMTQIMDIMEDFLRLR 1065
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWN 759
G K++R+DG TKA DR ++N F E + FLL+++ GGLGL L AD VI+ D WN
Sbjct: 1066 GMKYMRLDGGTKADDRTYLLNLFNEPNSEYFCFLLSTRAGGLGLNLQTADTVIIFDSDWN 1125
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
P D Q+ DRA+RIGQK +V + RL+T ++EE + + + K
Sbjct: 1126 PHQDLQAQDRAHRIGQKNEVRILRLITEDSIEEMVLERAVAK 1167
>gi|398994053|ref|ZP_10696980.1| DNA/RNA helicase, superfamily II, SNF2 family [Pseudomonas sp.
GM21]
gi|398133294|gb|EJM22508.1| DNA/RNA helicase, superfamily II, SNF2 family [Pseudomonas sp.
GM21]
Length = 897
Score = 256 bits (653), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 255/507 (50%), Gaps = 65/507 (12%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRL 351
T P + L P+Q EGL W+ SL GGIL DDMGLGKT+Q + L RL
Sbjct: 415 TATAPEGLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILTEKAVGRL 474
Query: 352 IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDI 411
+ +VV P +L+ +W+ E K+ +G K + ++ L D ++LTTY +
Sbjct: 475 DRPCMVVMPTSLIPNWLDEAAHFTPQLKVLALYGASRK-KHFD---KLADYDLILTTYAL 530
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
+ + + L ++LDE IKNP+++ A++ E+ + R+ +SG
Sbjct: 531 LPKDIEQLAAQPL------------HVLVLDEAQYIKNPNSKAAQAARELNARQRLCLSG 578
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
TP++N+L ELW+LF+F P LGD K F Y +PI EKR + L
Sbjct: 579 TPLENHLGELWSLFHFLLPGWLGDVKSFNRDYRVPI-----------EKRASEVRLQHLN 627
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 628 GRIKPFLLRRTKEQVATE--------LPPKTEIIHWVELNEAQRDVYETM---------- 669
Query: 592 DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
L + KK+ D + K A + ++++L +L A A
Sbjct: 670 ------RLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNDAALPA---- 717
Query: 652 FQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTT 711
+ S K+ ++ +LD+L EG +L+FSQ ML LI+ + +G ++ + G T
Sbjct: 718 ----RGSTSGKLDSLMEMLDELFEEGRRILLFSQFTSMLALIEVELKKRGVEYALLTGQT 773
Query: 712 KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
+ DR V DFQ G IFL++ + GG+GL LT+AD VI DP WNP+T+NQ+ DRAY
Sbjct: 774 R--DRRAPVKDFQSGKRQ-IFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAY 830
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
RIGQ+K V VY+++ GTVEEKI Q
Sbjct: 831 RIGQEKPVFVYKMIARGTVEEKIQHLQ 857
>gi|400592549|gb|EJP60713.1| DNA repair protein, SNF2 family [Beauveria bassiana ARSEF 2860]
Length = 721
Score = 256 bits (653), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 289/566 (51%), Gaps = 64/566 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR +L ++ +L PHQ EG+++++ + + G I+ D+MGLGKT+Q L
Sbjct: 118 PRVPVVLDPRLTKILRPHQVEGVKFMYRCVSGLIDTKANGCIMADEMGLGKTLQCITLLW 177
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A+VV P +L+ +W EL L A F K + EL
Sbjct: 178 TLLKQSPDAGKPTIQKAIVVCPASLVKNWANELIK-WLGANAITPFAIDGKASKEELTRQ 236
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + V++ +Y+ +R N + L+ + + DEGH +K
Sbjct: 237 LRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI------------GLLFCDEGHRLK 284
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + +L + + R+I++GTPIQN+L E ++L +F PELLG F++++E+PIL
Sbjct: 285 NGDSNTFNALNNLNVSRRVILTGTPIQNDLTEYFSLTSFANPELLGSRLEFRKRFEIPIL 344
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A + +K+ G A EL + + +RR N++ S L K E +V+
Sbjct: 345 RGRDADASEEDKQRGDACTTELLGIVNKFLIRR-TNDIL-------SKYLPVKYEHVVFC 396
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + + G PL A+ ILKK+C+HP LL ++ L G +
Sbjct: 397 NLAPFQLDLYNYFITSPDIQALLRGKGSQPLKAINILKKLCNHPDLL---VLDEDLPGSE 453
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
P D +I A D +E S K+ + +L ++ + ++ +++ S
Sbjct: 454 YCF-PSD---------YIPKEARGRD-REVKPWYSGKMQVLDRMLARIRQDTNDKIVLIS 502
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQVGGLG 742
L+L ++ S+ Y LR+DGT + R K+V+ F EGD +FLL+S+ GG G
Sbjct: 503 NYTSTLDLFEKLCRSRQYGCLRLDGTMNVNKRQKLVDRFNDPEGDEF-VFLLSSKAGGCG 561
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
+ L A+R+I+ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K
Sbjct: 562 INLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQ 621
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELL 827
L + E + R+FS+ LREL
Sbjct: 622 SLSSCVVDSAEDVERHFSRDSLRELF 647
>gi|390370960|ref|XP_001195839.2| PREDICTED: probable global transcription activator SNF2L2-like,
partial [Strongylocentrotus purpuratus]
Length = 1746
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 274/545 (50%), Gaps = 74/545 (13%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LIKRALVVAPKTLLS 365
+Q +GL+WL SL+ GIL D+MGLGKT+Q + L + ++ LV+ P + LS
Sbjct: 1051 YQVKGLQWLVSLYNNNLNGILADEMGLGKTIQTIALVCHLIEKKKVMGPFLVIVPLSTLS 1110
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W+ E G + Y G+ R L VLLTTY+ V ++ SF+
Sbjct: 1111 NWVLEFDKWGPTVHKIVYKGSPQTRRTLALTLRSTKFSVLLTTYEYV------MKDKSFL 1164
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKELWAL 484
S W +MI+DEGH +KN + + L S HR++++GTP+QN L ELWAL
Sbjct: 1165 SK------LRWKHMIVDEGHRMKNHHCKLTQILNTHYSSHHRLLLTGTPLQNKLPELWAL 1218
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
NF P + F++ + P +K L+ E+ I + + L + ++P+ LRRLK
Sbjct: 1219 MNFLLPSIFKSCSTFEQWFNAPFAATGEKVELNEEETI--LIIRRLHKVLRPFLLRRLKR 1276
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--------L 596
EV + L +K E ++ +++ QR LY I+L+ DGS
Sbjct: 1277 EV--------ESQLPEKVEYVIKCDMSALQRLLYRHMQTKGIMLT--DGSEKDKKGRGGT 1326
Query: 597 AALT----ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
ALT L+KIC+HP + R E+ + +E L + ++ D +
Sbjct: 1327 KALTNTIMQLRKICNHPFMF--RHIEE--------------SFSEHLGVTGGIISGPDLY 1370
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
+ + K + +L KL GH +L+F Q ++ ++++ +G+K+LR+DGTTK
Sbjct: 1371 R-----VGGKFELLDRILPKLKALGHRILLFCQMTTLMTILEDFFVYRGFKYLRLDGTTK 1425
Query: 713 ASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
A DR ++ F E + IF+L+++ GGLGL L AD VI+ D WNP D Q+ DRA+
Sbjct: 1426 ADDRGILLQTFNEANCPYFIFMLSTRAGGLGLNLQTADTVILFDSDWNPHQDLQAQDRAH 1485
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYR---------KQIFKGGLFKTATEHKEQIRYFSQQD 822
RIGQ +V V RLMT +VEEKI +I + G+F + + E+ Y
Sbjct: 1486 RIGQVNEVRVLRLMTVQSVEEKILAAARWKMNMDSKIIQAGMFDQKSTNSERRAY----- 1540
Query: 823 LRELL 827
LR LL
Sbjct: 1541 LRALL 1545
>gi|357118205|ref|XP_003560848.1| PREDICTED: uncharacterized protein LOC100845251 [Brachypodium
distachyon]
Length = 3830
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 270/544 (49%), Gaps = 80/544 (14%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVA 359
G L +Q GLRWL SL+ GIL D+MGLGKT+Q+ L L ++ + LVV
Sbjct: 990 GGTLREYQMNGLRWLVSLYNNNLNGILADEMGLGKTVQVISLLCYLMETKNDRGPFLVVV 1049
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSKS 418
P ++LS W+ EL S YFG + R+ + ++Q K VLLTTY+ + N
Sbjct: 1050 PSSVLSGWVSELNFWAPSINKIAYFGPPEERRRLFKEMIVQQKFNVLLTTYEYLMNKHDR 1109
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNL 478
+ S W Y+I+DEGH IKN S + L S+HRI+++GTP+QNNL
Sbjct: 1110 PKLSKIQ----------WHYIIIDEGHRIKNASCKLNADLKLYRSSHRILLTGTPLQNNL 1159
Query: 479 KELWALFNFCCPELLGD----NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
+ELWAL NF P + ++WF + +E D+ L E+ + + L + +
Sbjct: 1160 EELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSADEALLSEEENL--LIINRLHQVL 1217
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV--LSAFD 592
+P+ LRRLK++V E L K E RL C+ Y+ L + + L
Sbjct: 1218 RPFVLRRLKHKVESE--------LPGKIE-----RLVRCEASAYQKLLMTRVEKNLGGIG 1264
Query: 593 GSPLAAL--TI--LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
+ ++ T+ L+ IC+HP L++ E++ + P L KL M
Sbjct: 1265 AVKVRSVHNTVMELRNICNHP-YLSQLHVEEIEGHLPRHYLPSIVRLCGKLEM------- 1316
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
LD+L+P+ GH VL+FS ++L+++++ + K YK+
Sbjct: 1317 ---------------------LDRLLPKLKATGHRVLLFSTMTRLLDVMEDYLVWKKYKY 1355
Query: 705 LRIDGTTKASDRVKIVNDFQEGD-VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG T +R ++++F + D A IFLL+ + GG+G+ L AD VI+ D WNP D
Sbjct: 1356 LRLDGHTSGHERGALIDNFNDPDSPAFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVD 1415
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI---------YRKQIFKGGLFKTATEHKEQ 814
Q+ RA+RIGQKK+V+V RL T TVEE++ Q G F T +++
Sbjct: 1416 LQAQARAHRIGQKKEVLVLRLETVRTVEEQVRAAAEHKLGVANQSITAGFFDNNTSAEDR 1475
Query: 815 IRYF 818
Y
Sbjct: 1476 REYL 1479
>gi|350402509|ref|XP_003486511.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A containing DEAD/H box
1-like [Bombus impatiens]
Length = 831
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 274/524 (52%), Gaps = 55/524 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA----LVVA 359
L P+Q GL WL +H Q GIL D+MGLGKT+Q+ FL L + L L+V
Sbjct: 263 LAPYQMVGLNWLAVMHTQNVNGILADEMGLGKTVQVIAFLTYLKEAGLRDEKDGPHLIVV 322
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV---LQDKGVLLTTYDIVRNNS 416
P + + +W EL K+ +Y+G+ + ++ L + L D VLLTTY+++ +
Sbjct: 323 PSSTMENWNNELERWSPGLKVVQYYGSQEERKEMRLGWRNGDLDDVDVLLTTYNLISSTP 382
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQN 476
+ R + Y++ DE H++KN T R ++L+ I + HRI+++GTP+QN
Sbjct: 383 EERRLFRVMP---------IHYVVFDEAHMLKNMGTIRYENLVRINAKHRILLTGTPLQN 433
Query: 477 NLKELWALFNFCCPELLGDNK-----WFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
NL EL +L F P L + F + ++P ++ N + L ++++ +A +
Sbjct: 434 NLLELMSLLIFVMPSLFAGKQADLKSLFSKNPKVPSVKKNSEQPLFEQEQVKNA-----K 488
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
+ ++P+ LRRLK EV + L +K E ++ + QR++Y + +E A
Sbjct: 489 QIMRPFVLRRLKAEVLRD--------LPEKTERVIKCPMIEKQRKMYTNLV-AEFSAEAD 539
Query: 592 DGSPLAALTI---LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
+ + + + L+K+ +HPLL+ E L + + L E + + D+
Sbjct: 540 QSTEVNGIGMMMQLRKLANHPLLVRDYYNESKLKVISNRLAKEHSYKQKNPDYVFEDLQW 599
Query: 649 KDDFQ-----------------EQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
D+Q ++ + + K+ + LL KL EGH VLIFSQ +L+
Sbjct: 600 MSDYQINQLTRTYKSLAGLGLPQELISEAGKLKILDELLPKLKEEGHRVLIFSQFTMILD 659
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+++E + +G +LR+DG+T +DR ++N + E + IFLL+++ GGLG+ LT AD V
Sbjct: 660 ILEEYLTIRGRTYLRLDGSTPVTDRQYLINQYMEDESIFIFLLSTKAGGLGINLTAADTV 719
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
I+ D +NP D Q+ DR +R+GQK+ V + RL++ T+EE IY
Sbjct: 720 IIHDIDFNPYNDKQAEDRCHRVGQKRPVSIIRLLSEATIEEGIY 763
>gi|449456214|ref|XP_004145845.1| PREDICTED: TATA-binding protein-associated factor 172-like [Cucumis
sativus]
Length = 2052
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 278/547 (50%), Gaps = 70/547 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
Y L ++ L +Q+EG+ WL L GIL DDMGLGKT+Q +A RL
Sbjct: 1444 YKLCTELKMTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVACDIVERLTL 1503
Query: 352 -----IKRALVVAPKTLLSHW---IKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG 403
I +L++ P TL+ HW I++ V + + + +Y G+ V+ R L+
Sbjct: 1504 NDRENIPPSLIICPSTLVGHWAFEIEKYVDVSILSTL-QYVGS-VQERT-SLRECFNKYN 1560
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
V++T+YD+VR + + L S F W+Y ILDEGH+I+N ++ ++ ++ S
Sbjct: 1561 VIITSYDVVRKDVEYL--SQFH----------WNYCILDEGHIIRNAKSKITLAVKQLRS 1608
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
+R+++SGTPIQNN+ +LW+LF+F P LG + F+ Y P+L D R+ G
Sbjct: 1609 QNRLVLSGTPIQNNVMDLWSLFDFLMPGFLGTERQFQSTYGKPLLAARDSKCSARDAEAG 1668
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEA 580
+ + L +++ P+ LRR K+EV LS E I+ + L+ Q +LYE
Sbjct: 1669 ALAMEALHKQVMPFLLRRTKDEV-----------LSDLPEKIIQDRFCDLSPVQLKLYER 1717
Query: 581 FLNSEI--------------VLSAFDGSPLA------ALTILKKICDHPLLLTKRAAEDV 620
F S + V GS A AL L K+C HPLL+T D
Sbjct: 1718 FSGSHVRQEISSMVKSNESEVPQESSGSTKASSHIFQALQYLLKLCSHPLLVTGEKMSDS 1777
Query: 621 LDGMDSMLNPEDAALAEKL--AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG- 677
+ + + L P+ + + +L H + + E+ C I D + G
Sbjct: 1778 MKCILTELLPDSSDIISELHKLHHSPKLVALSEILEE-----CGIGVDTLGSDGAVSCGQ 1832
Query: 678 HNVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLL 734
H VLIF+Q + +L++I+ + K +LR+DG+ + R IV F + LL
Sbjct: 1833 HRVLIFAQHKALLDIIERDLFHAHMKNVTYLRLDGSVEPEKRFDIVKAFNSDPTIDVLLL 1892
Query: 735 TSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI 794
T+ VGGLGL LT AD ++ ++ WNP D+Q++DRA+R+GQ+K V V+RL+ GT+EEK+
Sbjct: 1893 TTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKV 1952
Query: 795 YRKQIFK 801
Q FK
Sbjct: 1953 MSLQKFK 1959
>gi|405356449|ref|ZP_11025418.1| hypothetical protein A176_1553 [Chondromyces apiculatus DSM 436]
gi|397090493|gb|EJJ21348.1| hypothetical protein A176_1553 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1006
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 280/585 (47%), Gaps = 102/585 (17%)
Query: 254 RDGKLNKSA---HSGLVNVLDDYSDDSVLEDEGSIT-----LSGPRSTYMLPGKIGNMLF 305
RDG+L A +GL L+ S LE + L PR LP + L
Sbjct: 512 RDGRLANHAIPQLTGLCEALEHPSPPG-LERLAPLVKGFEKLPEPR----LPPDLTATLR 566
Query: 306 PHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKRALVVAPKTLL 364
+Q +G+ WL L G GG+L DDMGLGKT+Q IC G LVVAP ++L
Sbjct: 567 AYQLQGVSWLTFLRQAGLGGVLADDMGLGKTLQTICTLGPG---------TLVVAPTSVL 617
Query: 365 SHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSF 424
+W E+ S K+ Y G + + + V LTTY ++R +++ L
Sbjct: 618 PNWEAEVRRFRPSLKVSVYHGPG--------RSLDETADVTLTTYALMRLDAEVLGAKQ- 668
Query: 425 ISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWAL 484
W ++LDE IKNP +Q A++ + + ++ +SGTPI+N L ELW+L
Sbjct: 669 -----------WSTVVLDEAQAIKNPDSQVARAAYGLQADFKLALSGTPIENRLDELWSL 717
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
+F LLG K F+E++ P+ +D H A+ LR RI+P+ LRRLK
Sbjct: 718 MHFTNQGLLGGRKEFEERWSRPV---SDNH---------KGAAERLRARIRPFILRRLKR 765
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--EIVLSAFDGSPLAALTIL 602
+V E L + + + + LT +R +Y+A ++ E V+S +
Sbjct: 766 DVAPE--------LPPRTDAVRHVTLTERERAVYDAVYSATREEVVSQLE---------- 807
Query: 603 KKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCK 662
A VL ++++L AA L Q S K
Sbjct: 808 -------------AGGSVLKALEALLRLRQAACHPAL------------VPGQQAKTSSK 842
Query: 663 ISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVND 722
+ ++ L + +GH L+FSQ ML+LI+ ++ G F+R+DG+T ++R +
Sbjct: 843 VQALVEALGTAVEDGHKALVFSQWTSMLDLIEPALQEAGIGFIRLDGST--ANRGGVAAS 900
Query: 723 FQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVY 782
FQ+ P+ L++ + G GL LT AD V +VDP WNPS + Q+ DRA+RIGQ++ V+VY
Sbjct: 901 FQDPKGPPVMLISLKAGATGLNLTAADHVFLVDPWWNPSVEAQAADRAHRIGQQRPVMVY 960
Query: 783 RLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELL 827
RL++ GTVEEKI Q K LF+ A ++ DL +LL
Sbjct: 961 RLVSQGTVEEKILTLQAKKRELFEAALGGASGATAITRADLMQLL 1005
>gi|323530052|ref|YP_004232204.1| SNF2-like protein [Burkholderia sp. CCGE1001]
gi|323387054|gb|ADX59144.1| SNF2-related protein [Burkholderia sp. CCGE1001]
Length = 1175
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 185/557 (33%), Positives = 278/557 (49%), Gaps = 70/557 (12%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKR 354
+P + L +Q++GL W+ L QG G+L DDMGLGKT+Q + LA RL +
Sbjct: 656 VPSALRAQLRAYQQQGLNWMQYLREQGLAGVLADDMGLGKTVQTLAHILAEKEAGRLDQP 715
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
AL++ P TL+ +W +E K+ G K R ++ + ++LTTY ++
Sbjct: 716 ALIIVPTTLVHNWREEARRFAPELKVLVLNGPQRKDRFEQIG----EHELILTTYALLWR 771
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+ K L + +ILDE +KN +T+ A+++ + + HR+ ++GTP+
Sbjct: 772 DQKVLAEHQY------------HLLILDEAQYVKNATTKAAQAIRGLAARHRLCLTGTPL 819
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGND--KHALDREKRIGSAVAKELRE 532
+N+L ELW+ F+F P LG K F ++ PI + ND + +L L
Sbjct: 820 ENHLGELWSQFDFLLPGFLGSQKDFTRRWRNPIEKNNDGVRRSL-------------LAR 866
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--EIVLSA 590
RI+P+ LRR K+EV E L K ++ + L QR LYE + E V +A
Sbjct: 867 RIRPFMLRRRKDEVAKE--------LPAKTTIVCSVDLEGAQRDLYETVRTAMQEKVRAA 918
Query: 591 FDGSPLA--------ALTILKKICDHPLLL-TKRAAEDVLDGMDSMLNPEDAALAEKLAM 641
LA AL L+++C P L+ T AE DS D + E +
Sbjct: 919 VSAQGLARSHIIVLDALLKLRQVCCDPRLVRTLHGAEH--SAADSAGEGADVSAGEAVKT 976
Query: 642 H---------IADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNL 692
H +D AE+ S K+ +LS+L +LI EG VL+FSQ ML L
Sbjct: 977 HENSSDAPLRSSDKAERG----ARTTRSAKLDLLLSMLPELIEEGRRVLLFSQFTGMLAL 1032
Query: 693 IQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVI 752
I E++ ++ + G T +DR+ V FQ G V P+FL++ + GG+GL LT AD VI
Sbjct: 1033 IAEALDEAAIPYVILTGDT--ADRITPVERFQHGKV-PLFLISLKAGGVGLNLTAADTVI 1089
Query: 753 VVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA-TEH 811
DP WNP+ +NQ+ DRA+R+GQ K V VY+L+ G++EEKI Q K GL + +E
Sbjct: 1090 HYDPWWNPAAENQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILSED 1149
Query: 812 KEQIRYFSQQDLRELLS 828
FS D+ L +
Sbjct: 1150 AAGAAKFSDDDIDALFA 1166
>gi|452690|emb|CAA82750.1| DNA repair protein [Schizosaccharomyces pombe]
Length = 852
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 290/563 (51%), Gaps = 72/563 (12%)
Query: 299 KIGNMLFPHQREGLRWLWSL------HCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-- 350
K+ +L PHQ EG+++L+ C G I+ D+MGLGKT+Q L L
Sbjct: 259 KLTRILRPHQIEGVKFLYKCVTGRIDRC-ANGCIMADEMGLGKTLQCIALLWTLLKQSPQ 317
Query: 351 ----LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD----- 401
I++A++ P +L+ +W EL L F K+ + EL LQ
Sbjct: 318 AGKPTIEKAIITCPSSLVKNWANELVK-WLGKDAITPFILDGKSSKQELIMALQQWASVH 376
Query: 402 -----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+ VL+ +Y+ +R+ + L + E G ++ DEGH +KN +
Sbjct: 377 GRQVTRPVLIASYETLRSYVEHLNNA-----EIG-------MLLCDEGHRLKNSDSLTFT 424
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
+L ++ R+I+SGTPIQN+L E ++L NF P LLG + F++ YE+PIL+G D
Sbjct: 425 ALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGT 484
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+++K G A EL + + + +RR N++ S L K E +V+ L+ Q
Sbjct: 485 EKDKENGDAKLAELAKIVNRFIIRR-TNDIL-------SKYLPVKYEHVVFCNLSEFQLS 536
Query: 577 LYEAFLNS-EI--VLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDA 633
LY+ F+ S EI +L PL A+ +LKKIC+HP LL ED L+G +++ P
Sbjct: 537 LYKHFITSPEINKILRGTGSQPLKAIGLLKKICNHPDLLN--LTED-LEGCEALFPPGFI 593
Query: 634 ALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNVLIFSQTRK 688
+ + + NI +S + +L++++ + +++ S
Sbjct: 594 P---------------RELRGRDRNIDSSLSGKMLVLERMLYQIKQETDDKIVLISNYTS 638
Query: 689 MLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTK 747
L+L ++ ++GYK LR+DGT + R ++V+ F + + A +FLL+S+ GG G+ L
Sbjct: 639 TLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINLIG 698
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKT 807
A+R+I+ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K L
Sbjct: 699 ANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSC 758
Query: 808 ATEHKEQI-RYFSQQDLRELLSL 829
+ + + R+FS +LR+L L
Sbjct: 759 VVDEAQDVERHFSLDNLRQLFQL 781
>gi|307214999|gb|EFN89841.1| ATP-dependent helicase brm [Harpegnathos saltator]
Length = 1322
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 269/552 (48%), Gaps = 72/552 (13%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
++T M+ GK+ +Q +GL WL SL GIL D+MGLGKT+Q + L +
Sbjct: 492 QATIMVNGKLKE----YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKK 547
Query: 351 LIKRA-LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
+ L++ P + LS+W+ E S + Y G+ R + Q VLLTTY
Sbjct: 548 KVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTY 607
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRII 468
+ V I D+ W YMI+DEGH +KN + + L + HR++
Sbjct: 608 EYV------------IKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLL 655
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
++GTP+QN L ELWAL NF P + F++ + P +K L+ E+ I + +
Sbjct: 656 LTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI--LIIR 713
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
L + ++P+ LRRLK EV + L K E I+ ++ Q+ LY+ + ++L
Sbjct: 714 RLHKVLRPFLLRRLKKEV--------ESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLL 765
Query: 589 SAFDGSP------------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
+ DGS + + L+K+C+HP + A+
Sbjct: 766 T--DGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMF--------------------QAIE 803
Query: 637 EKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQES 696
EK H+ S K + +L KL H VL+F Q +++ ++++
Sbjct: 804 EKYCEHVGTQGSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDY 863
Query: 697 IGSKGYKFLRIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVD 755
+ +G+ +LR+DGTTKA DR ++ F + G +FLL+++ GGLGL L AD VI+ D
Sbjct: 864 LSWRGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFD 923
Query: 756 PAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFK 806
WNP D Q+ DRA+RIGQK +V V RLMT +VEE+I Y+ +++ + G+F
Sbjct: 924 SDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFD 983
Query: 807 TATEHKEQIRYF 818
+ E+ ++
Sbjct: 984 QKSTGSERQQFL 995
>gi|392580143|gb|EIW73270.1| hypothetical protein TREMEDRAFT_24951 [Tremella mesenterica DSM 1558]
Length = 1502
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 264/509 (51%), Gaps = 62/509 (12%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRALVVA 359
G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L S R +V+
Sbjct: 618 GGTLKDYQVKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLIESKRQPGPFIVIV 677
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
P + L++W E S + G+ ++ R+ + D V LTTY+ +
Sbjct: 678 PLSTLTNWTMEFDRWAPSVRTVILKGSPLQRREQYARLRSGDFQVCLTTYEYI------- 730
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNNL 478
I + W +MI+DEGH +KN ++ +++L E + +R+I++GTP+QNNL
Sbjct: 731 -----IKERPLLSKIKWVHMIIDEGHRMKNVKSKLSQTLNEHYSTRYRLILTGTPLQNNL 785
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILR-GNDKHALDREKRIGSAVAKELRERIQPY 537
ELWAL NF P++ K F E + P G +K ++ E+ + V K L + ++P+
Sbjct: 786 PELWALLNFVLPKIFNSVKSFDEWFNAPFANTGGEKMEMNEEEAL--LVVKRLHKVLRPF 843
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD-GSPL 596
LRRLK +V E L K E I++ ++++ Q +LYE+ + + + G P
Sbjct: 844 LLRRLKKDVESE--------LPDKVEKIIYTKMSALQWKLYESVKKYKTLPTDMSAGKPR 895
Query: 597 A------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
A+ L+KIC+HP + + ED G +
Sbjct: 896 RQANLQNAIMQLRKICNHPFVF-REVDEDFTVGTN------------------------- 929
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
EQ S K + LL KL GH VLIF Q +++ +I + +G+K+ R+DG+
Sbjct: 930 -IDEQIVRTSGKFELLDRLLPKLFRTGHKVLIFFQMTEIMTIIADFFDYRGWKYCRLDGS 988
Query: 711 TKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
TKA DR ++++ F + +P +F+L+++ GGLGL L AD VI+ D WNP D Q+ D
Sbjct: 989 TKADDRQQLLSTFNDPS-SPYQVFILSTRAGGLGLNLQSADTVIIYDTDWNPFADLQAQD 1047
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
RA+RIGQKK+V V RL++ GTVEE + ++
Sbjct: 1048 RAHRIGQKKEVRVLRLISSGTVEELVLQR 1076
>gi|254452793|ref|ZP_05066230.1| helicase, Snf2 family [Octadecabacter arcticus 238]
gi|198267199|gb|EDY91469.1| helicase, Snf2 family [Octadecabacter arcticus 238]
Length = 970
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 262/516 (50%), Gaps = 70/516 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGL-FHSRLIKR 354
+P + L P+QR G WL +L G GGIL DDMGLGKT+Q +A ++ +
Sbjct: 498 IPASLNAELRPYQRIGYGWLKALSDNGFGGILADDMGLGKTVQTLALMANRHIENKSDRP 557
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
+L+V P +L+S+W E K+ G ++E + D +++TTY ++
Sbjct: 558 SLLVVPTSLISNWQTEAKRFAPDLKLLTLHGA----DRHERMERIADSDLVITTYPLINR 613
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+ + L + F D ILDE +KNP++ AK + +I + RI ++GTP+
Sbjct: 614 DHEKLFANEF------------DLAILDEAQAVKNPASNVAKRIRDIKARQRIALTGTPV 661
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
+NNL ELWAL+++ P LGD K F +Y PI + D+ A + L R+
Sbjct: 662 ENNLTELWALYDWLIPGFLGDRKSFASEYRKPIEQKGDQ-----------ARQRLLSSRV 710
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS 594
+P+ LRR K+EV DD+ + +E+I LT Q LYE+ V SA D
Sbjct: 711 KPFLLRRTKDEV--ADDLPPKTII---DEVIT---LTGKQAALYES------VRSAMDAR 756
Query: 595 PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQE 654
AL K A + +D++L +L A K+
Sbjct: 757 VREALA------------KKGLAGSRITVLDALLKLRQVCCDPRLVKLDAAAKVKE---- 800
Query: 655 QHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKAS 714
S K S ++ ++++L+ EG VLIFSQ +ML LI+ + S+G+ + + G T+
Sbjct: 801 -----SAKFSRLMEIMEELMSEGRKVLIFSQFVEMLRLIESEVQSRGWSYAMLHGQTR-- 853
Query: 715 DRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIG 774
DR ++ FQ GD A +FL++ + GG GL LT AD VI+ DP WNP+ + Q++DRA+RIG
Sbjct: 854 DRSSEIDKFQSGD-AQVFLISLKAGGTGLNLTAADTVILYDPWWNPAVERQAMDRAHRIG 912
Query: 775 QKKDVVVYRLMTCGTVEEKI----YRKQIFKGGLFK 806
Q K V VYRL T GTVE I RKQ LF+
Sbjct: 913 QDKPVFVYRLYTEGTVESAIQNMQARKQALADALFE 948
>gi|452841230|gb|EME43167.1| hypothetical protein DOTSEDRAFT_72522 [Dothistroma septosporum NZE10]
Length = 1419
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 267/518 (51%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRALVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L R LV+
Sbjct: 542 VGGTLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKRQHGPYLVI 601
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G + + ++ Q + VLLTTY+ +
Sbjct: 602 VPLSTLTNWNSEFERWAPSVNRIVYKGPPAQRKNHQQQIRYGNFQVLLTTYEFI------ 655
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + ++ + + +R+I++GTP+QNN
Sbjct: 656 ------IKDRPVLSKVRWLHMIIDEGHRMKNAQSKLSNTISQYYHTRYRLILTGTPLQNN 709
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELW++ NF P + K F E + P G DK L E+++ V + L + ++
Sbjct: 710 LTELWSMLNFVLPNIFKSAKSFDEWFNTPFANTGGQDKMELTEEEQL--LVIRRLHKVLR 767
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ L++ Q +LY+ + ++ I + DG
Sbjct: 768 PFLLRRLKKDV--EKD------LPDKQERVIKCSLSALQAKLYKQLMQHNRIDVVGADGK 819
Query: 595 PLA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP + E+V D M NP
Sbjct: 820 KTGLRGLSNMLMQLRKLCNHPFVF-----EEVEDQM----NPNRLT-------------- 856
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 857 --------NDLIWRTAGKFELLDRVLPKFEATGHRVLMFFQMTQIMNIMEDFLRYRGTKY 908
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TKA DR +++ F G IFLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 909 LRLDGSTKADDRSELLRLFNAPGSEYQIFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD 968
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL+T +VEEKI + +K
Sbjct: 969 LQAQDRAHRIGQKNEVRILRLITSNSVEEKILERAQYK 1006
>gi|334185968|ref|NP_190996.3| TATA box binding protein associated factor-like protein [Arabidopsis
thaliana]
gi|197691963|dbj|BAG70033.1| homolog of human BTAF1 [Arabidopsis thaliana]
gi|332645686|gb|AEE79207.1| TATA box binding protein associated factor-like protein [Arabidopsis
thaliana]
Length = 2045
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 277/555 (49%), Gaps = 71/555 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
Y L ++ L +Q+EG+ WL L GIL DDMGLGKT+Q +A R
Sbjct: 1441 YKLCTELKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGS 1500
Query: 352 -----IKRALVVAPKTLLSHWIKELTA-VGLSA-KIREYFGTCVKTRQYELQYVLQDKGV 404
+ +++V P TL+ HW E+ + LS + +Y G+ + L+ + V
Sbjct: 1501 TDELDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSA--QDRVSLREQFNNHNV 1558
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
++T+YD+VR + L S W+Y ILDEGH+IKN ++ ++ ++ +
Sbjct: 1559 IITSYDVVRKDVDYLTQFS------------WNYCILDEGHIIKNAKSKITAAVKQLKAQ 1606
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
HR+I+SGTPIQNN+ ELW+LF+F P LG + F+ Y P+L D ++ G
Sbjct: 1607 HRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGV 1666
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEAF 581
+ L +++ P+ LRR K EV LS E I+ + L+ Q +LYE F
Sbjct: 1667 LAMEALHKQVMPFLLRRTKEEV-----------LSDLPEKIIQDRYCDLSPVQLKLYEQF 1715
Query: 582 LNS----EI-VLSAFDGSP----------------LAALTILKKICDHPLL-LTKRAAED 619
S EI + DGS AL L K+C HPLL L + E
Sbjct: 1716 SGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEP 1775
Query: 620 VLDGMDSMLNPEDAALAE--KLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
V + +M+N + E K+ VA ++ +E C I S D + G
Sbjct: 1776 VASDLAAMINGCSDIITELHKVQHSPKLVALQEILEE------CGIGSDASSSDGTLSVG 1829
Query: 678 -HNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
H VLIF+Q + +L++I++ + K ++R+DG+ R +IV F + L
Sbjct: 1830 QHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLL 1889
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT+ VGGLGL LT AD ++ ++ WNP D+Q++DRA+R+GQK+ V V+RL+ GT+EEK
Sbjct: 1890 LTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEK 1949
Query: 794 IYRKQIFKGGLFKTA 808
+ Q FK + T
Sbjct: 1950 VMSLQKFKVSVANTV 1964
>gi|416026337|ref|ZP_11569786.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320329151|gb|EFW85148.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 914
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 260/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y + I + ++ L L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRIAIEKHGNQDRL-----------HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQGMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|345488256|ref|XP_001601964.2| PREDICTED: DNA repair and recombination protein RAD54B [Nasonia
vitripennis]
Length = 898
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 167/558 (29%), Positives = 279/558 (50%), Gaps = 64/558 (11%)
Query: 298 GKIGNMLFPHQREGLRWLWSL-----HCQGKGGILGDDMGLGKTMQICGFLAGLFHS--- 349
G + ++L PHQREG+ +L+ KG IL D+MGLGKT+Q + L
Sbjct: 302 GCLASVLRPHQREGIVFLYKCIMGMNSAHHKGAILADEMGLGKTLQCISLIWTLLKKGPS 361
Query: 350 --RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG-VLL 406
++KR L+V+P +L +W KE + KI Y V+ +Q + + V++
Sbjct: 362 GKPVLKRVLIVSPSSLCGNWNKEFKRWLGTMKIAPYV---VEGKQKVKDFTKTPRACVMI 418
Query: 407 TTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHR 466
Y++ N + +F D +I DEGH +KN + K L ++ R
Sbjct: 419 IGYEMFVRNIDDINNLNF------------DLLICDEGHRLKNSEVKTLKFLSQLRCKRR 466
Query: 467 IIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
I+++GTP+QN+L E + L NF P + G +K YE I+ A + E +G
Sbjct: 467 ILVTGTPVQNDLTEFYNLANFVNPGVFGTPGDYKSYYEHKIVASQRATADEDEVALGQER 526
Query: 527 AKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI 586
AKEL E+ + + LRR + + L +K+E++V+ + T Q LY +
Sbjct: 527 AKELYEKSKSFILRRTNTLI--------NKYLPQKHELVVFCKPTVEQNNLYSLITDYWF 578
Query: 587 VLSAFDGS--PLAALTILKKICDHPLLLTKRAA---EDVLDGMDSMLNPEDAALAEKLAM 641
S DG+ PL +T LKK+C+HP L T + ++VL + + L+ + + +
Sbjct: 579 NRSLIDGNVIPLTVITALKKVCNHPYLFTSEKSNILDEVLPSVPTNLSAINTSYS----- 633
Query: 642 HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKG 701
S K+ + ++ + V++ S + L+ +++ ++G
Sbjct: 634 -----------------YSSKVKVVQAIFQAIKRTNEKVVLVSYFTQTLDFLEKVCCTEG 676
Query: 702 YKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+F R+DG T A+ R K+V+ F D + FLL+++ GG+GL L A R+I+ D WNP+
Sbjct: 677 LQFCRLDGHTPAASRTKLVDRFNSKDNSFFFLLSAKAGGVGLNLVGASRLILFDSDWNPA 736
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE--HKEQIRYFS 819
D Q++ R +R GQK+ V +YRL+T GT+EEKIY++QI K GL + + H ++ S
Sbjct: 737 NDAQAMARIWRDGQKRSVFIYRLLTTGTIEEKIYQRQISKTGLSEAVVDANHISSLK-LS 795
Query: 820 QQDLRELLSLPKQGFDVS 837
+L++L +L Q V+
Sbjct: 796 ASELKDLFTLDSQTSSVT 813
>gi|390604671|gb|EIN14062.1| hypothetical protein PUNSTDRAFT_140446 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1678
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 301/583 (51%), Gaps = 98/583 (16%)
Query: 304 LFPHQREGLRWL----WSL-HCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVV 358
L P Q +GL WL W+L HC IL D+MGLGKT+QI FL L + ALVV
Sbjct: 819 LMPFQLDGLNWLCNNWWNLQHC-----ILADEMGLGKTVQIATFLGTLVERWKVFPALVV 873
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK---GVLLTTYDIVRNN 415
P + L++W++E ++ ++G K R ++ L+D VL+TTY+ + NN
Sbjct: 874 VPNSTLTNWMREFERWAPKLRVVPFYGE-AKARAVIREFELRDSRNYHVLVTTYETL-NN 931
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
K S + AG W+ +++DEG +K+ S+ K L E+ S HR++++GTP+
Sbjct: 932 PKDF---SSVFKGAGR----WEVLVVDEGQRLKSDSSLIFKKLRELKSIHRVLMTGTPLN 984
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDRE-KRIGSAVAKELRERI 534
NN++EL+ L NF P +W +D L+RE + + ++L E++
Sbjct: 985 NNMRELFNLMNFLDP-----TEW------------HDLAGLEREYAELNENLVRQLHEKL 1027
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFD 592
+PYFLRR+K+EV L KNE+IV + + Q+++Y + L N +++ S
Sbjct: 1028 RPYFLRRMKSEVL---------PLPPKNEVIVPVSMAPLQKEIYRSILSQNLDLLRSLTQ 1078
Query: 593 GS-PLAA-----------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
GS P + L L+K HP L++ +D+ P + AE
Sbjct: 1079 GSNPNTSASGLRANMNNLLMQLRKCLQHPYLVS----DDI--------EPRGLSPAET-- 1124
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK 700
E+ + S K+ + SLL KL GH +L+FSQ L+++++ + +
Sbjct: 1125 ------------HEKLIDASAKLRLLRSLLPKLWARGHRILLFSQFSIALDIVEDFLTGE 1172
Query: 701 GYKFLRIDGTTKASDRVKIVNDF-QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
G K+LR+DG TK +DR K +++F +EG + IFLLT++ GG+G+ L AD VIV DP +N
Sbjct: 1173 GVKYLRLDGNTKQADRQKSMDEFNKEGSIYSIFLLTTRAGGVGINLWSADTVIVFDPDFN 1232
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY---RKQIFKGGLFKTATEHKEQIR 816
P D Q++ RAYR GQKK +V++LM + EE+I +K++ L + +E
Sbjct: 1233 PHQDLQAIARAYRYGQKKTCLVFKLMVKDSAEERIMQTGKKKLVLDHLIVQKMDDEEN-- 1290
Query: 817 YFSQQDLRELLSL-PKQGFDVSLTQQQLHEEHGDQHNMDESLE 858
D++ +L+ K FD S +Q+ H ++D +E
Sbjct: 1291 --GGDDVQSILTFGAKALFDGSSEEQEARNIHYSDQDIDRLIE 1331
>gi|145352136|ref|XP_001420413.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580647|gb|ABO98706.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1769
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 269/541 (49%), Gaps = 78/541 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LP K L P+Q++G+ WL L G L DDMGLGKT+Q LA R K
Sbjct: 1184 FKLPFKCARTLRPYQQDGVNWLAFLRRFKLHGALADDMGLGKTLQSTCILAATTVER--K 1241
Query: 354 RA-------LVVAPKTLLSHWIKELTAVGLSA-----KIREYFGTCVKTRQYELQYVLQD 401
A LV+ P TL+SHW E +GL + EY G+ R + + D
Sbjct: 1242 EAGLKTLPHLVICPSTLVSHWAYE---IGLYVEPDVLRPLEYHGSPPDRRALQKDFGKYD 1298
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++ +Y+ VR + SL D W Y +LDEGH I+NP ++ +++ +
Sbjct: 1299 --VVIMSYESVRADFDSL------------DKFDWCYCVLDEGHAIRNPKSRVTQAVKSV 1344
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+++SGTPIQN++ ELW+LF+F P LG + FK+ Y + R
Sbjct: 1345 RAEHRLLLSGTPIQNDVVELWSLFDFLMPGFLGTEREFKKTYGIAAARSAAAKKGGGLSE 1404
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ L +++ P+ +RR K+EV + L K V++ LT QR++Y+AF
Sbjct: 1405 QGALATGALHKQVMPFVMRRTKDEVLKD--------LPPKIIQDVYVELTDAQRKMYDAF 1456
Query: 582 LNSEI---VLSAFDGSP---------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLN 629
+SE +SA +G L L+K+C HP L+ V DG N
Sbjct: 1457 ESSEAKDQAVSAIEGGGGAEGAAQHVFTTLQYLRKLCSHPKLV-------VSDGASKKFN 1509
Query: 630 PE-DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIP-----EGHNVLIF 683
PE + + L + D D +E+ N D+ P GH VL+F
Sbjct: 1510 PEMRSPKFDALKQILIDCGIGVDLEEEKSNG-----------DEGKPNPASGAGHRVLVF 1558
Query: 684 SQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGG 740
SQ + +L+L++ + + + +LR+DG+ S R +V F + LLT+ VGG
Sbjct: 1559 SQLKSLLDLVENELFTTQMRDVSWLRLDGSIPPSQRFDVVRKFNADPSIDVLLLTTHVGG 1618
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
LGL LT AD V+ ++ WNP D Q++DRA+R+GQ+K V VYR++T GT+EEKI Q F
Sbjct: 1619 LGLNLTSADTVVFLEHDWNPQKDLQAMDRAHRLGQRKTVNVYRILTRGTLEEKIMSLQRF 1678
Query: 801 K 801
K
Sbjct: 1679 K 1679
>gi|395326370|gb|EJF58780.1| hypothetical protein DICSQDRAFT_156571 [Dichomitus squalens LYAD-421
SS1]
Length = 1470
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/541 (31%), Positives = 269/541 (49%), Gaps = 71/541 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L S+ + LV+
Sbjct: 585 VGGTLKDYQLKGLQWMVSLYNNKLNGILADEMGLGKTIQTISLITFLIESKKQRGPYLVI 644
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S K+ Y G + + + + V+LTTY+ +
Sbjct: 645 VPLSTMTNWSSEFAKWAPSVKMISYKGNPAQRKVLQTDLRTGNFQVVLTTYEYI------ 698
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W YMI+DEGH +KN ++ A++L + S +R+I++GTP+QNN
Sbjct: 699 ------IKDRIHLSRMKWIYMIIDEGHRMKNTQSKLAQTLTQYYHSRYRLILTGTPLQNN 752
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGN--DKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P DK L+ E+ + + + L + ++
Sbjct: 753 LPELWALLNFALPKVFNSVKSFDEWFNTPFANSGTGDKIELNEEEAL--LIIRRLHKVLR 810
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD--G 593
P+ LRRLK +V E L K E ++ +R+++ Q QLY+ +++ D G
Sbjct: 811 PFLLRRLKKDVESE--------LPDKVEKVIKVRMSALQSQLYKQMKKYKMIADGKDAKG 862
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
P L L+KIC HP L + ++ +NP + + +KL
Sbjct: 863 KPGGVKGLSNELMQLRKICQHPFLF---------ESVEDRVNP-SSMIDDKLIRS----- 907
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRI 707
S KI + +L K GH VLIF Q K+++++++ + G+K+LR+
Sbjct: 908 ------------SGKIELLSRILPKFFATGHRVLIFFQMTKVMDIMEDFLKMMGWKYLRL 955
Query: 708 DGTTKASDRVKIVNDFQEGDVA-PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
DG TK DR V F + +F+L+++ GGLGL L AD VI+ D WNP D Q+
Sbjct: 956 DGGTKTEDRAGHVQLFNAPNSEYKVFILSTRAGGLGLNLQTADTVIIFDSDWNPHADLQA 1015
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKEQIRY 817
DRA+RIGQ K V + R +T +VEE ++ + ++ + G F + +EQ +
Sbjct: 1016 QDRAHRIGQTKVVRILRFITEKSVEESMFARARYKLDIDDKVIQAGRFDNKSTQEEQEEF 1075
Query: 818 F 818
Sbjct: 1076 L 1076
>gi|422654875|ref|ZP_16717602.1| helicase/SNF2 family domain-containing protein [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330967945|gb|EGH68205.1| helicase/SNF2 family domain-containing protein [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 918
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 259/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 436 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 491
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQ+ ++LTTY
Sbjct: 492 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQNYDLILTTYA 547
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 548 LLPRDMEMLEKQPL------------HVLILDEAQYIKNPNSKAAQAARNLTARQRLCLS 595
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I + ++ L L
Sbjct: 596 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRL-----------HHL 644
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 645 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 686
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L H V K
Sbjct: 687 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQ 738
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 739 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 791
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 792 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 848
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 849 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882
>gi|363754225|ref|XP_003647328.1| hypothetical protein Ecym_6118 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890965|gb|AET40511.1| hypothetical protein Ecym_6118 [Eremothecium cymbalariae
DBVPG#7215]
Length = 915
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 274/534 (51%), Gaps = 61/534 (11%)
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKE-------- 370
G I+ D+MGLGKT+Q L L I + ++V P +L+++W E
Sbjct: 344 GCIMADEMGLGKTLQCISLLWTLLRQGSQGRPTIDKCIIVCPSSLVNNWANEIVKWLGPN 403
Query: 371 -LTAVGLSAKIREYFGTCVKTRQYELQYVLQD-----KGVLLTTYDIVRNNSKSLRGSSF 424
L+ + + K V Q Q+ L K VL+ +Y+ +R N L+ S
Sbjct: 404 SLSPLAIDGKKSSLPNGSVS--QSIKQWALSQGRNIVKPVLIISYETLRRNVDLLKHSKV 461
Query: 425 ISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWAL 484
M+ DEGH +KN + SL I + R+I+SGTPIQN+L E +AL
Sbjct: 462 ------------GLMLADEGHRLKNGESLTFTSLDSINCSRRVILSGTPIQNDLSEYFAL 509
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
+F P LLG F++ +ELPILRG D A D+E G ++L + + + +RR N
Sbjct: 510 LSFSNPGLLGTRSQFRKNFELPILRGRDADATDKEIEEGQLKLQQLSQIVSKFIIRR-TN 568
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS---PLAALTI 601
++ S L K E ++++ L+ Q+ +Y+ F+ S V G+ PL A+ +
Sbjct: 569 DIL-------SKYLPCKYEHVIFVNLSPMQKSIYQHFVKSRDVAKLVKGTGSQPLKAIGL 621
Query: 602 LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISC 661
LKK+C+HP LL + ED+ +G D ++ PED +A H + F+ +C
Sbjct: 622 LKKLCNHPDLL--QLPEDI-EGCDHLI-PED--YRSSMAQH-----NRSGFRGHTAIQTC 670
Query: 662 ---KISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRV 717
K S + L K+ E ++ +++ S + L+LI+ Y LR+DGT + R
Sbjct: 671 YSGKFSILERFLYKIRTESNDKIVLISNYTQTLDLIEMMCRYNHYGVLRLDGTMSINKRQ 730
Query: 718 KIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQK 776
K+V+ F D IFLL+S+ GG G+ L A+R+I+VDP WNP+ D Q++ R +R GQK
Sbjct: 731 KLVDRFNNPDGDEFIFLLSSKAGGCGINLIGANRLILVDPDWNPAADQQALARVWRDGQK 790
Query: 777 KDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
KD +YR ++ GT+EEKIY++Q K L + KE + R FS +LR+L
Sbjct: 791 KDCFIYRFISTGTIEEKIYQRQSMKMSLSSCVVDEKEDVERLFSSDNLRQLFQF 844
>gi|334185970|ref|NP_001190085.1| TATA box binding protein associated factor-like protein [Arabidopsis
thaliana]
gi|332645687|gb|AEE79208.1| TATA box binding protein associated factor-like protein [Arabidopsis
thaliana]
Length = 2129
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 277/555 (49%), Gaps = 71/555 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
Y L ++ L +Q+EG+ WL L GIL DDMGLGKT+Q +A R
Sbjct: 1472 YKLCTELKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGS 1531
Query: 352 -----IKRALVVAPKTLLSHWIKEL-TAVGLSA-KIREYFGTCVKTRQYELQYVLQDKGV 404
+ +++V P TL+ HW E+ + LS + +Y G+ + L+ + V
Sbjct: 1532 TDELDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSA--QDRVSLREQFNNHNV 1589
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
++T+YD+VR + L S W+Y ILDEGH+IKN ++ ++ ++ +
Sbjct: 1590 IITSYDVVRKDVDYLTQFS------------WNYCILDEGHIIKNAKSKITAAVKQLKAQ 1637
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
HR+I+SGTPIQNN+ ELW+LF+F P LG + F+ Y P+L D ++ G
Sbjct: 1638 HRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGV 1697
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEAF 581
+ L +++ P+ LRR K EV LS E I+ + L+ Q +LYE F
Sbjct: 1698 LAMEALHKQVMPFLLRRTKEEV-----------LSDLPEKIIQDRYCDLSPVQLKLYEQF 1746
Query: 582 LNS----EI-VLSAFDGSP----------------LAALTILKKICDHPLL-LTKRAAED 619
S EI + DGS AL L K+C HPLL L + E
Sbjct: 1747 SGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEP 1806
Query: 620 VLDGMDSMLNPEDAALAE--KLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
V + +M+N + E K+ VA ++ +E C I S D + G
Sbjct: 1807 VASDLAAMINGCSDIITELHKVQHSPKLVALQEILEE------CGIGSDASSSDGTLSVG 1860
Query: 678 -HNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
H VLIF+Q + +L++I++ + K ++R+DG+ R +IV F + L
Sbjct: 1861 QHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLL 1920
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEK 793
LT+ VGGLGL LT AD ++ ++ WNP D+Q++DRA+R+GQK+ V V+RL+ GT+EEK
Sbjct: 1921 LTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEK 1980
Query: 794 IYRKQIFKGGLFKTA 808
+ Q FK + T
Sbjct: 1981 VMSLQKFKVSVANTV 1995
>gi|289648568|ref|ZP_06479911.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
aesculi str. 2250]
Length = 914
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 261/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|308493124|ref|XP_003108752.1| hypothetical protein CRE_11128 [Caenorhabditis remanei]
gi|308248492|gb|EFO92444.1| hypothetical protein CRE_11128 [Caenorhabditis remanei]
Length = 1496
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 169/502 (33%), Positives = 265/502 (52%), Gaps = 61/502 (12%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR----ALVVA 359
L P+Q +GL W+ SL+ GIL D+MGLGKT+Q L L +K+ LV+
Sbjct: 535 LKPYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLLTYLME---VKQNNGPYLVIV 591
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
P + LS+W E + K Y GT R+ E Q D VL+TTY+ V
Sbjct: 592 PLSTLSNWQSEFAKWAPNVKSVIYKGTKDARRRVEAQIKRVDFNVLMTTYEYV------- 644
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE--IPSAHRIIISGTPIQNN 477
I ++A W YMI+DEGH +KN ++ + S+L + HR++++GTP+QN
Sbjct: 645 -----IKEKALLGKIRWKYMIIDEGHRLKNHNS-KLTSMLNGFFKAQHRLLLTGTPLQNK 698
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P +K L++E+ + + + L + ++P+
Sbjct: 699 LPELWALLNFLLPSIFSSCDTFEQWFNAPFATTGEKVELNQEETM--LIIRRLHKVLRPF 756
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLA 597
LRRLK EV E L K E ++ +++ Q+ +Y + ++L A S
Sbjct: 757 LLRRLKKEVESE--------LPDKTEYVIKCDMSALQKVIYR-HMKKGLLLDAKMSSGAR 807
Query: 598 AL--TI--LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQ 653
+L TI L+K+C+HP L N ED+ A + +V+ KD +
Sbjct: 808 SLSNTIVHLRKLCNHPFLFQ---------------NIEDSCRAH---WKVNEVSGKDLMR 849
Query: 654 EQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKA 713
++ K+ + +L KL GH VL+F Q KM+++ ++ + + Y +LR+DG+TK
Sbjct: 850 -----VAGKLELLDRILPKLKATGHRVLMFFQMTKMMDIFEDFLHFRNYTYLRLDGSTKP 904
Query: 714 SDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYR 772
+R +++ + D +F+L+++ GGLGL L AD VI+ D WNP D Q+ DRA+R
Sbjct: 905 DERGDLLSLYNAPDSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHR 964
Query: 773 IGQKKDVVVYRLMTCGTVEEKI 794
IGQKK+V V RL+T +VEEK+
Sbjct: 965 IGQKKEVRVLRLITANSVEEKM 986
>gi|395648382|ref|ZP_10436232.1| putative helicase [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 897
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 254/504 (50%), Gaps = 67/504 (13%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKRA 355
P + L P+Q EGL W+ SL GGIL DDMGLGKT+Q + L RL +
Sbjct: 419 PEGLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILTEKAAGRLDRPC 478
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
+VV P +L+ +W+ E K+ +G K LQ D +LLTTY ++ +
Sbjct: 479 MVVMPTSLIPNWLDEAAHFTPQLKVLALYGAGRKKHFASLQ----DYDLLLTTYALLPKD 534
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
+ L +ILDE IKNPS++ A++ E+ + R+ +SGTP++
Sbjct: 535 IEQLAPLPL------------HVLILDEAQYIKNPSSKAAQAARELNARQRLCLSGTPLE 582
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
N+L ELW+LF+F P LGD K F Y PI EKR + L RI+
Sbjct: 583 NHLGELWSLFHFLLPGWLGDLKSFNRDYRAPI-----------EKRGSDVRLQHLNGRIK 631
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 632 PFLLRRTKEQVATE--------LPPKTEIIHWVDLNEAQRDVYETM-------------- 669
Query: 596 LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQ-E 654
L + KK+ D + K A + ++++L KL D+ +D
Sbjct: 670 --RLAMDKKVRDE--ITRKGVARSQIIILEALL---------KLRQVCCDLRLVNDASLP 716
Query: 655 QHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKAS 714
+ S K+ ++ +L++L EG +L+FSQ ML+LI+ + +G + + G T+
Sbjct: 717 SRGSSSGKLDSLMEMLEELFAEGRRILLFSQFTSMLSLIELELKKRGVAYALLTGQTR-- 774
Query: 715 DRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIG 774
DR V DFQ G + IFL++ + GG+GL LT+AD VI DP WNP+T+NQ+ DRAYRIG
Sbjct: 775 DRRTPVKDFQSGKLQ-IFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAYRIG 833
Query: 775 QKKDVVVYRLMTCGTVEEKIYRKQ 798
Q+K V VY+++ GTVEEKI Q
Sbjct: 834 QEKPVFVYKMIARGTVEEKIQHLQ 857
>gi|416015756|ref|ZP_11563222.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|422595941|ref|ZP_16670226.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422683843|ref|ZP_16742099.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|320324786|gb|EFW80858.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|330986243|gb|EGH84346.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331013173|gb|EGH93229.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
Length = 914
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 261/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|326430759|gb|EGD76329.1| hypothetical protein PTSG_01031 [Salpingoeca sp. ATCC 50818]
Length = 752
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 196/616 (31%), Positives = 301/616 (48%), Gaps = 78/616 (12%)
Query: 246 LVVNRPDRRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKI-GNML 304
L V RP R + A +V Y+ + ++ + T R +++ I G L
Sbjct: 80 LGVRRPTVRKALHDPEADGAVVL----YTPPELTAEQATKTFGEKRPVHVVVDPILGTKL 135
Query: 305 FPHQREGLRWLWS----LHCQG-KGGILGDDMGLGKTMQICGFLAGLFHSR-----LIKR 354
PHQ EG+++LW+ ++ +G G I+ D+MGLGKT Q + L +
Sbjct: 136 RPHQVEGVQFLWNAVTGVNIEGFNGCIMADEMGLGKTFQCVTLVWTLLTQSPDCRPTTNK 195
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYF---GTCVKTRQYELQYVLQ----DKGVLLT 407
A++V P +L+ +W E L +I G RQ E ++V VL+
Sbjct: 196 AIIVCPSSLVKNWYNEF-GKWLGNRISPLAVDSGRDDMKRQME-RFVSATGRVQHPVLIL 253
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
+Y+ +R N+ L +I DEGH +KN +Q KSL+++ +A RI
Sbjct: 254 SYEALRLNADILCVKPI------------GIVICDEGHRLKNSQSQTYKSLMQLKTARRI 301
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
I+SGTPIQN L E +AL FC P LLG F++++E PILR D A D+E IG+
Sbjct: 302 ILSGTPIQNELLEYYALVEFCNPGLLGSAGEFRKRFENPILRSRDSLATDKELEIGAQRL 361
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
E+ E + +RR N++ S L K E +V R T+ Q ++Y+A L +++
Sbjct: 362 AEMTEIVNRCVIRR-TNDIL-------SKYLPPKIEQVVCCRPTNLQMEMYKAMLGAKMK 413
Query: 588 L--SAFDGSPLAALTILKKICDHPLLL---------TKRAAEDVLDGMDSMLNPEDAALA 636
GS LA +T LKK+C+HP LL TK A LD L P L
Sbjct: 414 RKDGTVTGSSLAFITELKKLCNHPQLLHDKIAGKGKTKDKAFGALDPFLPQLKPSMQRLQ 473
Query: 637 EKLAMHIADVAEKDDFQEQHDNISCKISFI-LSLLDKLIPEGHNVLIFSQTRKMLNLIQE 695
+L+ +A + C ++ I + DK++ + S + L L
Sbjct: 474 PQLSGKLA-------------VLDCLLATIKMQTTDKIV-------LVSNYTQTLELFTT 513
Query: 696 SIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVV 754
+GY+++R+DG+ R KIV+ F + + IF+L+S+ GG GL L A+R+++
Sbjct: 514 LCALRGYQYVRLDGSMTIKRRQKIVDRFNDPTSSDFIFMLSSKAGGCGLNLIGANRLVMF 573
Query: 755 DPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQ 814
DP WNP+ D Q++ R +R GQ K VYR +T GT+EEKI ++Q K L + +
Sbjct: 574 DPDWNPANDEQAMARVWRDGQTKLCFVYRFVTTGTIEEKILQRQAHKKALSQCVVDDGLD 633
Query: 815 I-RYFSQQDLRELLSL 829
+ R+FS+ DLREL L
Sbjct: 634 VERHFSKNDLRELFVL 649
>gi|383854229|ref|XP_003702624.1| PREDICTED: ATP-dependent helicase brm-like [Megachile rotundata]
Length = 2017
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 167/539 (30%), Positives = 266/539 (49%), Gaps = 76/539 (14%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLLS 365
+Q +GL WL SL GIL D+MGLGKT+Q + L + + L++ P + LS
Sbjct: 1198 YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLS 1257
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W+ E S + Y G+ R + Q VLLTTY+ V I
Sbjct: 1258 NWVLEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYV------------I 1305
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKELWAL 484
D+ W YMI+DEGH +KN + + L + HR++++GTP+QN L ELWAL
Sbjct: 1306 KDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWAL 1365
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
NF P + F++ + P +K L+ E+ I + + L + ++P+ LRRLK
Sbjct: 1366 LNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI--LIIRRLHKVLRPFLLRRLKK 1423
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--------- 595
EV + L K E I+ ++ Q+ LY+ + ++L+ DGS
Sbjct: 1424 EV--------ESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLT--DGSEKGKQGKGGA 1473
Query: 596 ---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD---VAEK 649
+ + L+K+C+HP + A+ EK H+ +
Sbjct: 1474 KALMNTIVQLRKLCNHPFMFQ--------------------AIEEKYCEHVGTQGIITGP 1513
Query: 650 DDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDG 709
D ++ S K + +L KL H VL+F Q +++ ++++ +G +G+ +LR+DG
Sbjct: 1514 DLYR-----ASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLGWRGFMYLRLDG 1568
Query: 710 TTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
TTKA DR ++ F + G +FLL+++ GGLGL L AD VI+ D WNP D Q+ D
Sbjct: 1569 TTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQD 1628
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQIRYF 818
RA+RIGQK +V V RLMT +VEE+I Y+ +++ + G+F + E+ ++
Sbjct: 1629 RAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFL 1687
>gi|315048263|ref|XP_003173506.1| hypothetical protein MGYG_03681 [Arthroderma gypseum CBS 118893]
gi|311341473|gb|EFR00676.1| hypothetical protein MGYG_03681 [Arthroderma gypseum CBS 118893]
Length = 1358
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 265/519 (51%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + L ++ LV+
Sbjct: 526 VGGTLKEYQLRGLTWMISLYNNNLNGILADEMGLGKTIQTISLITYLIETKKQNGPYLVI 585
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G V +Q++ + VLLTTY+ +
Sbjct: 586 VPLSTLTNWNLEFEKWAPSISRIVYKGPQVTRKQHQQAIRWGNFQVLLTTYEFI------ 639
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L S +R+I++GTP+QNN
Sbjct: 640 ------IKDRPILSKVKWLHMIVDEGHRMKNAGSKLSFTLTNYYQSRYRLILTGTPLQNN 693
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P D+ L E+++ V + L + ++
Sbjct: 694 LPELWALLNFALPNIFKSVKSFDEWFNTPFANTGSQDRMELTEEEQL--LVIRRLHKVLR 751
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG-- 593
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ + L+ DG
Sbjct: 752 PFLLRRLKKDV--EKD------LPEKQERVIRCRFSALQAKLYKQLVTHN-KLAVSDGKG 802
Query: 594 --SPLAALT----ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
+P+ L+ L+K+C+HP V D ++ LNP A
Sbjct: 803 GKTPVRGLSNMLMQLRKLCNHPF---------VFDSVEEELNPGKAT------------- 840
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K
Sbjct: 841 ---------NDLIWRTAGKFELLDRILPKFLASGHRVLMFFQMTQIMNIMEDFMRFRGMK 891
Query: 704 FLRIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+LR+DG TK+ DR ++ F E G FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 892 YLRLDGATKSDDRSDLLKRFNEPGSEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 951
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEE+I + FK
Sbjct: 952 DLQAQDRAHRIGQKNEVRILRLISSNSVEERILERAQFK 990
>gi|422605468|ref|ZP_16677482.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
mori str. 301020]
gi|330889124|gb|EGH21785.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
mori str. 301020]
Length = 914
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 261/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|302658563|ref|XP_003020983.1| hypothetical protein TRV_04848 [Trichophyton verrucosum HKI 0517]
gi|291184858|gb|EFE40365.1| hypothetical protein TRV_04848 [Trichophyton verrucosum HKI 0517]
Length = 1362
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 265/519 (51%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + L ++ LV+
Sbjct: 530 VGGTLKEYQLRGLTWMISLYNNNLNGILADEMGLGKTIQTISLITYLIETKKQNGPYLVI 589
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G V +Q++ + VLLTTY+ +
Sbjct: 590 VPLSTLTNWNLEFEKWAPSITRIVYKGPQVTRKQHQQAIRWGNFQVLLTTYEFI------ 643
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L S +R+I++GTP+QNN
Sbjct: 644 ------IKDRPILSKVKWLHMIVDEGHRMKNAGSKLSFTLTNYYQSRYRLILTGTPLQNN 697
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P D+ L E+++ V + L + ++
Sbjct: 698 LPELWALLNFALPNIFKSVKSFDEWFNTPFANTGSQDRMELTEEEQL--LVIRRLHKVLR 755
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG-- 593
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ + L+ DG
Sbjct: 756 PFLLRRLKKDV--EKD------LPEKQERVIRCRFSALQAKLYKQLVTHN-KLAVSDGKG 806
Query: 594 --SPLAALT----ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
+P+ L+ L+K+C+HP V D ++ LNP A
Sbjct: 807 GKTPVRGLSNMLMQLRKLCNHPF---------VFDSVEEELNPGKAT------------- 844
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K
Sbjct: 845 ---------NDLIWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFMRFRGMK 895
Query: 704 FLRIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+LR+DG TK+ DR ++ F E G FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 896 YLRLDGATKSDDRSDLLRRFNEPGSEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 955
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEE+I + FK
Sbjct: 956 DLQAQDRAHRIGQKNEVRILRLISSNSVEERILERAQFK 994
>gi|71733698|ref|YP_274080.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71554251|gb|AAZ33462.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 914
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 259/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I + ++ L L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRL-----------HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|227496410|ref|ZP_03926698.1| helicase [Actinomyces urogenitalis DSM 15434]
gi|226834062|gb|EEH66445.1| helicase [Actinomyces urogenitalis DSM 15434]
Length = 1213
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 261/525 (49%), Gaps = 65/525 (12%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--LIKRALVVAPK 361
L P+Q EG RWL L G GG+L DDMGLGKT+Q+ + + L LVVAP
Sbjct: 701 LRPYQLEGYRWLHLLRGAGLGGVLADDMGLGKTVQVLAEIQKMAEEPGGLTAPVLVVAPT 760
Query: 362 TLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRG 421
+++ W ++ ++RE T K Q Q VL+T+Y ++R + + L
Sbjct: 761 SVIGAWAEQAAQFCPGLRVREVRRTSAKRGTSMAQEAAQAD-VLVTSYTLMRLDEEDL-- 817
Query: 422 SSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKEL 481
W +++LDE IKN ++ K+ + + + I+GTP++N+L +L
Sbjct: 818 ----------AQVEWSWVVLDEAQFIKNHTSATYKAARRLRAPSTLAITGTPLENSLMDL 867
Query: 482 WALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRR 541
W+L + P LL + FKE Y+ PI RG + G + LR R+ P+ LRR
Sbjct: 868 WSLLSVSAPGLLPGPQRFKELYKRPIDRGGQQ---------GRDRLQALRSRMHPFMLRR 918
Query: 542 LKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA-----------FLNSEIVLSA 590
K EV H+ L K+E I+ + L+ R+ YEA L + +
Sbjct: 919 TKEEVAHD--------LPDKSEQILRVELSPSHRRAYEARLIRERQKVMGLLEDDTAQAR 970
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
F S L +LTIL+++ P L+ A E D D E A
Sbjct: 971 F--SALRSLTILRQMALDPALVPA-AEEGAQDDADPAAGHERAVRQGG------------ 1015
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
+ S K+ + L ++ EGH L+FSQ + L+ ++E + + G + L +DG
Sbjct: 1016 ----RRPRPSAKVEMLRDTLVPIVAEGHRALVFSQFTRYLSSVREELEAAGLRTLYLDGG 1071
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T SDR ++V F++G+ A +FL++ + GG GLTLT+AD V ++DP WNP + Q+VDRA
Sbjct: 1072 T--SDRQRVVAQFRDGE-ADVFLISLKAGGFGLTLTEADYVFLLDPWWNPQAEEQAVDRA 1128
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI 815
+RIGQ K V+VYR++ T+E+K+ + K GLF E ++
Sbjct: 1129 HRIGQDKPVMVYRMVAADTIEDKVMALKEKKAGLFAKVVEGSAEL 1173
>gi|167521471|ref|XP_001745074.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776688|gb|EDQ90307.1| predicted protein [Monosiga brevicollis MX1]
Length = 827
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 180/581 (30%), Positives = 290/581 (49%), Gaps = 73/581 (12%)
Query: 300 IGNMLFPHQREGLRWLWSLHC--------QGKGGILGDDMGLGKTMQICGFLAGLFHS-- 349
+ +L PHQREG+R++ + C +G G IL DDMGLGKT+Q + L
Sbjct: 204 LSTILRPHQREGVRFV--IECVAGCKSDLEGTGCILADDMGLGKTLQCISVVWTLLKQGF 261
Query: 350 ---RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFG-----TCVKTRQYELQYVLQD 401
L +RAL++ P +L+ +W A+ R++ G T + +L++V Q
Sbjct: 262 DGKPLCQRALIICPGSLVKNW---------EAEFRKWLGVERIKTFAISSANKLEHVQQA 312
Query: 402 KG--VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLL 459
K V++ +Y++ L+ F D +I DE H +KN + + + L
Sbjct: 313 KAFPVVIVSYEMYLRCMDLLKQVRF------------DVVICDEAHRLKNANAKTTRILS 360
Query: 460 EIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDRE 519
+ + RI ++GTP+QN+L+E + L +F P L G + FK YE PI+R A E
Sbjct: 361 GLATRRRIALTGTPVQNDLQEFFTLVDFVNPGLFGSSAKFKRLYETPIVRARQHDATPAE 420
Query: 520 KRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYE 579
K +G A A+EL I + LRR K ++A L K + +V+ + T Q QLY+
Sbjct: 421 KDLGEARAEELNRTIHEFVLRRTKE--------VNAAYLPPKTDYVVFCQPTPLQLQLYQ 472
Query: 580 AFLNSEIVLSAFDG-----SPLAALTILKKICDHPLLLTKRAAEDVLDG-MDSMLNPEDA 633
+ ++ V S + L + L+ +C+ P LL R + +V D D +L
Sbjct: 473 RLIATQFVRSCMNAVRGGTRHLLVIAALRMLCNAPSLLAGRQSANVADSDFDRVLKDVRR 532
Query: 634 ALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-HNVLIFSQTRKMLNL 692
L DVA + E S K++ + +L + + L+ S + + L++
Sbjct: 533 LLP---GSDDNDVAARTTLLEG----SGKVALVRHMLRQWREKTDERALLVSNSTRCLDI 585
Query: 693 IQESIGSKGYKFLRIDGTTKASDRVKIVNDF---QEGDVAPIFLLTSQVGGLGLTLTKAD 749
+Q ++G+ FLR+ G+T R+++VN F D +FL++S+ GG+GL + A
Sbjct: 586 LQLLCEAEGWPFLRLQGSTPTHQRLEMVNRFNARHHDDF--VFLMSSKAGGVGLNIVGAS 643
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTAT 809
R+++ D WNPS D Q++ R +R GQ + V +YRL+ GT+EEKIY++QI K L T
Sbjct: 644 RLVLFDTDWNPSHDLQAMARIWREGQTRPVFIYRLVATGTIEEKIYQRQIVKSALGTTVM 703
Query: 810 EHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQ 850
E KE + FS +DL+EL L DV+ QL + D+
Sbjct: 704 EDKETEQAFSTKDLKELFQL---HLDVASETVQLMRKKKDK 741
>gi|354545782|emb|CCE42510.1| hypothetical protein CPAR2_201530 [Candida parapsilosis]
Length = 836
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 290/573 (50%), Gaps = 77/573 (13%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P ++ K+ +L PHQ G+++L+ + + KG I+ D+MGLGKT+Q +
Sbjct: 231 PNVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLMDPKAKGCIMADEMGLGKTLQCLTLMW 290
Query: 345 GLFHS-----RLIKRALVVAPKTLLSHWIKE---------LTAVGLSAKIREYFGTCVKT 390
L R I++ ++V P +L+ +W E LT + + K T
Sbjct: 291 TLLKQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGK---------ST 341
Query: 391 RQYELQYVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
+ EL LQ + VL+ +Y+ +R N L G+ E G M+
Sbjct: 342 KSNELGAALQQWSTAQGRNIVRPVLIISYETLRRNVDKLAGT-----EVG-------LML 389
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
DEGH +KN + +L + R+I+SGTPIQN+L E ++L NF P LG F+
Sbjct: 390 ADEGHRLKNGESLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFR 449
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
+ +E ILRG D A D+E+ G A EL + + + +RR N++ S L
Sbjct: 450 KNFENAILRGRDADATDKEREKGDAKLIELSQLVSKFIIRR-TNDIL-------SKYLPV 501
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNS-EI--VLSAFDGSPLAALTILKKICDHPLLLTKRAA 617
K E +++ L+ Q+ LY F+ S EI ++ PL A+ +LKK+C+H
Sbjct: 502 KYEYVLFTGLSPMQKDLYNHFITSPEIKKLIKGIGSQPLKAIGMLKKLCNH---PDLLDL 558
Query: 618 EDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
D L+G +S L PED + I + D Q S K + L K+ E
Sbjct: 559 PDDLEGCES-LKPEDYESS------ITATGRRRDVQTW---FSGKFMILERFLHKIHRET 608
Query: 678 HN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLT 735
+ +++ S + L+LI++ +K Y LR+DGT + R K+V+ F + + + IFLL+
Sbjct: 609 DDKIVLISNYTQTLDLIEKMCRNKKYGALRLDGTMNINKRQKLVDKFNDPNGSEFIFLLS 668
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
S+ GG G+ L A+R+I++DP WNP++D Q++ R +R GQKKD +YR ++ GT+EEKI+
Sbjct: 669 SKAGGCGINLIGANRLILIDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIF 728
Query: 796 RKQIFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
++Q K L + KE + R FS +LR+L
Sbjct: 729 QRQSMKMSLSSCVVDEKEDVERLFSADNLRQLF 761
>gi|221480872|gb|EEE19293.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii
GT1]
gi|221501605|gb|EEE27375.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii
VEG]
Length = 1200
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 292/596 (48%), Gaps = 89/596 (14%)
Query: 306 PHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLL 364
P+Q EGL WL LH +G GIL D+MGLGKT Q LA L + + LV+APK+ +
Sbjct: 259 PYQLEGLNWLIQLHERGMNGILADEMGLGKTYQTISLLAFLKEGKGVDGPHLVLAPKSTI 318
Query: 365 SHWIKELTAVGLSAKIREYFGTCVKTRQ--------YELQYVLQDKGVLLTTYDIVRNNS 416
+W+ E S G R+ + +D GVL D+V +
Sbjct: 319 GNWMTEFRKFCPSINAVRVLGDKETRRRTPDEDGEEGAKEEKEEDDGVLPDRVDVVVTSF 378
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQN 476
+ I + A W+Y+I+DE H IKN S++ A++ + HR++++GTP+QN
Sbjct: 379 EMC-----ILERAQFLKVDWEYIIIDEAHRIKNESSKLAQTARLFNTKHRLLLTGTPLQN 433
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPIL--RGNDKHALDREKRIGSAVAKELRERI 534
NL+ELWAL NF P L + F+ ++L G++ A +RE+R V + L +
Sbjct: 434 NLRELWALLNFLFPSLFSSSAEFEHLFDLTGTGEAGSEMTAEEREERNMKIVTR-LHRIL 492
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS 594
+P+ LRR+K EV E + K E+++ + L++ Q+QLY+ L + +A G+
Sbjct: 493 RPFMLRRVKKEVLKE--------MPPKKELLLVVPLSAMQKQLYKDLLTKNV--AALQGA 542
Query: 595 PLAALTIL-------KKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
A T L +K C+HP L DG +S
Sbjct: 543 EGAGRTQLLNLAMQLRKACNHPYLF---------DGYES--------------------E 573
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRI 707
D F E + K+ F LL +LI E LIF+Q KM++++++ + +K+ RI
Sbjct: 574 HADPFGEHVIENAGKLRFCDRLLRRLIQENRRCLIFTQMTKMIDILEDYCRIRLFKYCRI 633
Query: 708 DGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
DG T +R + + F G PIFLL+++ GGLG+ L AD VI+ D WNP D Q+
Sbjct: 634 DGNTSGDERDRQIEAFNAPGSDIPIFLLSTRAGGLGINLATADTVILYDSDWNPQVDLQA 693
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLREL 826
+DR +RIGQK V VYRL+ T+E+KI + + K + T +Q R QQ+ ++
Sbjct: 694 MDRVHRIGQKSAVNVYRLVHEHTIEQKIIERAMLK---LQLDTAIIQQGRLSDQQNQQKQ 750
Query: 827 LS--------------LPKQGFDVSLTQQQLH------EEHGDQHNMDESLEAHIQ 862
LS + K G +T+++L +E D M+E L+AH++
Sbjct: 751 LSKNELMTMVQFGADHIFKSGAGEDVTEEELEAILARGQERTDA--MNEKLQAHVK 804
>gi|440478876|gb|ELQ59674.1| DNA repair and recombination protein RAD54 [Magnaporthe oryzae
P131]
Length = 843
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 176/567 (31%), Positives = 286/567 (50%), Gaps = 66/567 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ ++ +L PHQ EG+++++ C + G I+ D+MGLGKT+Q
Sbjct: 240 PRVPVVIDPRLAKVLRPHQIEGVKFMY--RCVTGMIDEKANGCIMADEMGLGKTLQCITL 297
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
L L I++A+V P +L+ +W EL L A F K + EL
Sbjct: 298 LWTLLKQSPEAGKPAIQKAIVACPSSLVRNWANELVK-WLGADAITPFAIDGKASKEELT 356
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N + L+ + M+ DEGH
Sbjct: 357 RQLRQWAISSGRAVTRPVIIVSYETLRLNVEELKHTKI------------GLMLCDEGHR 404
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN +Q +L + + R+I+SGTPIQN+L E ++L +F P+LLG F++++ELP
Sbjct: 405 LKNGDSQTFTALNNLNVSRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELP 464
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A ++E+ G KEL + + +RR N++ S L K E +V
Sbjct: 465 ILRGRDADASEKERVKGDECLKELLALVNKFIIRR-TNDIL-------SKYLPVKYEHVV 516
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G
Sbjct: 517 FCNLAPFQLDLYNYFITSPDIQALLRGKGSQPLKAIGILKKLCNHPDLLN---LSDDLPG 573
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLI 682
++ P D E +E S K+ + +L ++ + ++ +++
Sbjct: 574 SEAHW-PSDYVPKESRGRD----------REIKPWYSGKMQVLDRMLARIRADTNDKIVL 622
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGL 741
S L+L + ++GY LR+DGT + R K+V+ F + + + +FLL+S+ GG
Sbjct: 623 ISNYTSTLDLFERLCRNRGYGSLRLDGTMNVTKRQKLVDKFNDPEGSEFVFLLSSKAGGC 682
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++Q K
Sbjct: 683 GLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHK 742
Query: 802 GGLFKTATEHKEQI-RYFSQQDLRELL 827
L + E + R+FS L+EL
Sbjct: 743 QSLSSCVVDSAEDVERHFSLDSLKELF 769
>gi|338533444|ref|YP_004666778.1| SNF2/helicase domain-containing protein [Myxococcus fulvus HW-1]
gi|337259540|gb|AEI65700.1| SNF2/helicase domain-containing protein [Myxococcus fulvus HW-1]
Length = 999
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 280/584 (47%), Gaps = 100/584 (17%)
Query: 254 RDGKLNKSAHSGLVNVLD--DYSDDSVLEDEGSIT-----LSGPRSTYMLPGKIGNMLFP 306
RDG+L A L ++ + ++ LE + L PR LP + L P
Sbjct: 505 RDGRLANHAAPQLNDLCEALEHPTPPALERLAPLVKGFEKLPEPR----LPEDLTATLRP 560
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKRALVVAPKTLLS 365
+Q +G+ WL L G GG+L DDMGLGKT+Q +C G LVVAP ++L
Sbjct: 561 YQLQGVGWLTFLRQAGLGGVLADDMGLGKTLQTLCALGPG---------TLVVAPTSVLP 611
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W E+ S K+ Y G + + V LTTY ++R +++ L
Sbjct: 612 NWEAEVKRFRPSLKVSVYHGPG--------RSLDASADVTLTTYALMRLDAEVLGARQ-- 661
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALF 485
W+ ++LDE IKNP +Q A++ + + ++ +SGTPI+N L ELW+L
Sbjct: 662 ----------WNTVVLDEAQAIKNPDSQVARAAYGLQADFKLALSGTPIENRLDELWSLM 711
Query: 486 NFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNE 545
+F LLG K F+E++ P+ N K A +R LR RI+P+ +RRLK +
Sbjct: 712 HFTNQGLLGGRKDFEERWARPVA-DNQKGAAER-----------LRARIRPFIMRRLKRD 759
Query: 546 VFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--EIVLSAFDGSPLAALTILK 603
V E L + + + + LT +R +Y+A ++ E V+S +
Sbjct: 760 VAPE--------LPPRTDAVRHVTLTERERAVYDAVYSATREEVVSQLE----------- 800
Query: 604 KICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKI 663
A VL ++++L AA L Q S K+
Sbjct: 801 ------------AGGSVLKALEALLRLRQAACHPAL------------VPGQQAKTSSKV 836
Query: 664 SFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDF 723
++ L + +GH L+FSQ ML+LI+ ++ G F+R+DG+T +R + F
Sbjct: 837 QALVEALGTAVEDGHKALVFSQWTSMLDLIEPALQEAGVGFIRLDGST--GNRGAVAASF 894
Query: 724 QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYR 783
Q+ P+ L++ + G GL LT AD V +VDP WNPS + Q+ DRA+RIGQ++ V+VYR
Sbjct: 895 QDPKGPPVMLISLKAGATGLNLTAADHVFLVDPWWNPSVEAQAADRAHRIGQQRPVMVYR 954
Query: 784 LMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELL 827
L++ GTVEEKI Q K LF+ A ++ DL +LL
Sbjct: 955 LVSQGTVEEKILTLQAKKRELFEAALGGGSGATAITRADLMQLL 998
>gi|308198272|ref|XP_001386950.2| protein required for X-ray damage repair, mitotic recombination,
and full meiotic recombination. mRNA increases in
meiosis [Scheffersomyces stipitis CBS 6054]
gi|149388940|gb|EAZ62927.2| protein required for X-ray damage repair, mitotic recombination,
and full meiotic recombination. mRNA increases in
meiosis [Scheffersomyces stipitis CBS 6054]
Length = 821
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 179/565 (31%), Positives = 286/565 (50%), Gaps = 79/565 (13%)
Query: 299 KIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLAGLFHS---- 349
K+ +L PHQ G+++L+ + + KG I+ D+MGLGKT+Q + L
Sbjct: 227 KLAKILRPHQIAGVKFLYRCTAGLIDARAKGCIMADEMGLGKTLQCIALMWTLLKQSPRG 286
Query: 350 -RLIKRALVVAPKTLLSHWIKE---------LTAVGLSAKIREYFGTCVKTRQYELQYVL 399
R I++ ++V P +L+ +W E LT + + K T+ EL L
Sbjct: 287 KRTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAVDGK---------STKNSELGGAL 337
Query: 400 QD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
Q + VL+ +Y+ +R N L G+ E G M+ DEGH +KN
Sbjct: 338 QQWSVARGRNIVRPVLIISYETLRRNVDKLAGT-----EVG-------LMLADEGHRLKN 385
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
+ +L + R+I+SGTPIQN+L E ++L NF P LG FK+ +E IL+
Sbjct: 386 GDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFKKNFENKILK 445
Query: 510 GNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR 569
G D A D+E+ +G EL + + + +RR N++ S L K E +++
Sbjct: 446 GRDAIATDKEREVGDEKLAELSQLVSKFIIRR-TNDIL-------SKYLPVKYEYVLFTG 497
Query: 570 LTSCQRQLYEAFLNS-EI--VLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
L+ Q+ LY F+ S EI +L PL A+ +LKK+C+HP LL D +G +
Sbjct: 498 LSPMQKDLYRHFITSPEIKKLLKGVGSQPLKAIGMLKKLCNHPDLLN---LPDDFEGSEK 554
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQ 685
+ PED + + + +E S K + L ++ + ++ +++ S
Sbjct: 555 FI-PED---------YCSSIGSGGRNREVQSWYSGKFMILERFLYQIRSQTNDKIVLISN 604
Query: 686 TRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQVGGLGL 743
+ L+LI+ K Y LR+DGT + R K+V+ F EG+ IFLL+S+ GG G+
Sbjct: 605 YTQTLDLIERMCRHKKYGSLRLDGTLSINKRQKLVDKFNDPEGNEF-IFLLSSKAGGCGI 663
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
L A+R+I++DP WNP+ D Q++ R +R GQKKD +YR ++ GT+EEKI+++Q K
Sbjct: 664 NLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMS 723
Query: 804 LFKTATEHKEQI-RYFSQQDLRELL 827
L + KE + R FS +LR+L
Sbjct: 724 LSSCVVDEKEDVERLFSADNLRQLF 748
>gi|327300573|ref|XP_003234979.1| RSC complex subunit Sth1 [Trichophyton rubrum CBS 118892]
gi|326462331|gb|EGD87784.1| RSC complex subunit Sth1 [Trichophyton rubrum CBS 118892]
Length = 1352
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 265/519 (51%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + L ++ LV+
Sbjct: 520 VGGTLKEYQLRGLTWMISLYNNNLNGILADEMGLGKTIQTISLITYLIETKKQNGPYLVI 579
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G V +Q++ + VLLTTY+ +
Sbjct: 580 VPLSTLTNWNLEFEKWAPSITRIVYKGPQVTRKQHQQAIRWGNFQVLLTTYEFI------ 633
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L S +R+I++GTP+QNN
Sbjct: 634 ------IKDRPILSKVKWLHMIVDEGHRMKNAGSKLSFTLTNYYQSRYRLILTGTPLQNN 687
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P D+ L E+++ V + L + ++
Sbjct: 688 LPELWALLNFALPNIFKSVKSFDEWFNTPFANTGSQDRMELTEEEQL--LVIRRLHKVLR 745
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG-- 593
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ + L+ DG
Sbjct: 746 PFLLRRLKKDV--EKD------LPEKQERVIRCRFSALQAKLYKQLVTHN-KLAVSDGKG 796
Query: 594 --SPLAALT----ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
+P+ L+ L+K+C+HP V D ++ LNP A
Sbjct: 797 GKTPVRGLSNMLMQLRKLCNHPF---------VFDSVEEELNPGKAT------------- 834
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K
Sbjct: 835 ---------NDLIWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFMRFRGMK 885
Query: 704 FLRIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+LR+DG TK+ DR ++ F E G FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 886 YLRLDGATKSDDRSDLLRRFNEPGSEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 945
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEE+I + FK
Sbjct: 946 DLQAQDRAHRIGQKNEVRILRLISSNSVEERILERAQFK 984
>gi|302510453|ref|XP_003017178.1| hypothetical protein ARB_04055 [Arthroderma benhamiae CBS 112371]
gi|291180749|gb|EFE36533.1| hypothetical protein ARB_04055 [Arthroderma benhamiae CBS 112371]
Length = 1405
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 265/519 (51%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + L ++ LV+
Sbjct: 573 VGGTLKEYQLRGLTWMISLYNNNLNGILADEMGLGKTIQTISLITYLIETKKQNGPYLVI 632
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G V +Q++ + VLLTTY+ +
Sbjct: 633 VPLSTLTNWNLEFEKWAPSITRIVYKGPQVTRKQHQQAIRWGNFQVLLTTYEFI------ 686
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L S +R+I++GTP+QNN
Sbjct: 687 ------IKDRPILSKVKWLHMIVDEGHRMKNAGSKLSFTLTNYYQSRYRLILTGTPLQNN 740
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P D+ L E+++ V + L + ++
Sbjct: 741 LPELWALLNFALPNIFKSVKSFDEWFNTPFANTGSQDRMELTEEEQL--LVIRRLHKVLR 798
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG-- 593
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ + L+ DG
Sbjct: 799 PFLLRRLKKDV--EKD------LPEKQERVIRCRFSALQAKLYKQLVTHN-KLAVSDGKG 849
Query: 594 --SPLAALT----ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
+P+ L+ L+K+C+HP V D ++ LNP A
Sbjct: 850 GKTPVRGLSNMLMQLRKLCNHPF---------VFDSVEEELNPGKAT------------- 887
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K
Sbjct: 888 ---------NDLIWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFMRFRGMK 938
Query: 704 FLRIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+LR+DG TK+ DR ++ F E G FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 939 YLRLDGATKSDDRSDLLRRFNEPGSEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 998
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEE+I + FK
Sbjct: 999 DLQAQDRAHRIGQKNEVRILRLISSNSVEERILERAQFK 1037
>gi|440467195|gb|ELQ36432.1| DNA repair and recombination protein RAD54 [Magnaporthe oryzae Y34]
Length = 869
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 176/567 (31%), Positives = 286/567 (50%), Gaps = 66/567 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ ++ +L PHQ EG+++++ C + G I+ D+MGLGKT+Q
Sbjct: 266 PRVPVVIDPRLAKVLRPHQIEGVKFMY--RCVTGMIDEKANGCIMADEMGLGKTLQCITL 323
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
L L I++A+V P +L+ +W EL L A F K + EL
Sbjct: 324 LWTLLKQSPEAGKPAIQKAIVACPSSLVRNWANELVK-WLGADAITPFAIDGKASKEELT 382
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N + L+ + M+ DEGH
Sbjct: 383 RQLRQWAISSGRAVTRPVIIVSYETLRLNVEELKHTKI------------GLMLCDEGHR 430
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN +Q +L + + R+I+SGTPIQN+L E ++L +F P+LLG F++++ELP
Sbjct: 431 LKNGDSQTFTALNNLNVSRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELP 490
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A ++E+ G KEL + + +RR N++ S L K E +V
Sbjct: 491 ILRGRDADASEKERVKGDECLKELLALVNKFIIRR-TNDIL-------SKYLPVKYEHVV 542
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G
Sbjct: 543 FCNLAPFQLDLYNYFITSPDIQALLRGKGSQPLKAIGILKKLCNHPDLLN---LSDDLPG 599
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLI 682
++ P D E +E S K+ + +L ++ + ++ +++
Sbjct: 600 SEAHW-PSDYVPKESRGRD----------REIKPWYSGKMQVLDRMLARIRADTNDKIVL 648
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGL 741
S L+L + ++GY LR+DGT + R K+V+ F + + + +FLL+S+ GG
Sbjct: 649 ISNYTSTLDLFERLCRNRGYGSLRLDGTMNVTKRQKLVDKFNDPEGSEFVFLLSSKAGGC 708
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++Q K
Sbjct: 709 GLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHK 768
Query: 802 GGLFKTATEHKEQI-RYFSQQDLRELL 827
L + E + R+FS L+EL
Sbjct: 769 QSLSSCVVDSAEDVERHFSLDSLKELF 795
>gi|326468544|gb|EGD92553.1| SNF2 family ATP dependent chromatin remodeling factor snf21
[Trichophyton tonsurans CBS 112818]
Length = 1352
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 265/519 (51%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + L ++ LV+
Sbjct: 520 VGGTLKEYQLRGLTWMISLYNNNLNGILADEMGLGKTIQTISLITYLIETKKQNGPYLVI 579
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G V +Q++ + VLLTTY+ +
Sbjct: 580 VPLSTLTNWNLEFEKWAPSITRIVYKGPQVTRKQHQQAIRWGNFQVLLTTYEFI------ 633
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L S +R+I++GTP+QNN
Sbjct: 634 ------IKDRPILSKVKWLHMIVDEGHRMKNAGSKLSFTLTNYYQSRYRLILTGTPLQNN 687
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P D+ L E+++ V + L + ++
Sbjct: 688 LPELWALLNFALPNIFKSVKSFDEWFNTPFANTGSQDRMELTEEEQL--LVIRRLHKVLR 745
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG-- 593
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ + L+ DG
Sbjct: 746 PFLLRRLKKDV--EKD------LPEKQERVIRCRFSALQAKLYKQLVTHN-KLAVSDGKG 796
Query: 594 --SPLAALT----ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
+P+ L+ L+K+C+HP V D ++ LNP A
Sbjct: 797 GKTPVRGLSNMLMQLRKLCNHPF---------VFDSVEEELNPGKAT------------- 834
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K
Sbjct: 835 ---------NDLIWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFLRFRGMK 885
Query: 704 FLRIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+LR+DG TK+ DR ++ F E G FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 886 YLRLDGATKSDDRSDLLRRFNEPGSEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 945
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEE+I + FK
Sbjct: 946 DLQAQDRAHRIGQKNEVRILRLISSNSVEERILERAQFK 984
>gi|49389246|dbj|BAD25208.1| putative SNF2 domain-containing protein [Oryza sativa Japonica Group]
Length = 2057
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 273/534 (51%), Gaps = 77/534 (14%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-LFHSRLIK-----RALVVAP 360
+Q+EG+ WL L GIL DDMGLGKT+Q +A + SR ++L++ P
Sbjct: 1471 YQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVAADIAESRARNDEQDPKSLIICP 1530
Query: 361 KTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
TL++HW E+ S+ ++ +Y G+ Q+ DK V++T+YDI+R +
Sbjct: 1531 STLVAHWEYEIEKYIDSSIMKPLQYIGSSQDRIILRSQF---DKFNVIITSYDIIRKDID 1587
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
L ++ W+Y +LDEGH+IKN ++ ++ ++ + HR+I+SGTPIQNN
Sbjct: 1588 FL------------ENVFWNYCVLDEGHIIKNSRSKITSAVKQLKAQHRLILSGTPIQNN 1635
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
+ ELW+LF+F P LG K F+ Y P+L D ++ G + L +++ P+
Sbjct: 1636 VLELWSLFDFLMPGFLGTEKQFQATYGKPLLAAKDPKCSAKDAEAGILAMEALHKQVMPF 1695
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEAFLNS---------- 584
LRR K+EV LS E I+ + L+ Q +LY+ F NS
Sbjct: 1696 LLRRTKDEV-----------LSDLPEKIIQDRYCNLSLLQLKLYDKFSNSNAKQEISTIV 1744
Query: 585 -EIVLSAFDGSPLA------ALTILKKICDHPLLLTKRAAEDVL------DGMDSMLNPE 631
E L P A AL L K+C HPLL+T + D L GM +
Sbjct: 1745 KENELDQSTSQPKATRHVFQALQYLLKLCSHPLLVTGESPPDYLVDLLKEIGMGTGDELH 1804
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-HNVLIFSQTRKML 690
D + KL VA ++ QE C I +S D G H VLIF+Q + +L
Sbjct: 1805 DLHHSPKL------VALQEILQE------CGIGSEISSPDASAAIGQHRVLIFAQHKALL 1852
Query: 691 NLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
++I++ + + +LR+DG+ + R +IV F + LLT+ VGGLGL LT
Sbjct: 1853 DIIEKDLFQSHMRSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTS 1912
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
AD ++ ++ WNP D Q++DRA+R+GQ+K V V+RL+ GT+EEK+ Q FK
Sbjct: 1913 ADTLVFMEHDWNPMKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFK 1966
>gi|367027062|ref|XP_003662815.1| SNF2-family ATP dependent chromatin remodeling factor like protein
[Myceliophthora thermophila ATCC 42464]
gi|347010084|gb|AEO57570.1| SNF2-family ATP dependent chromatin remodeling factor like protein
[Myceliophthora thermophila ATCC 42464]
Length = 1466
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 274/520 (52%), Gaps = 73/520 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + + LV+
Sbjct: 550 VGGTLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLITYLIEKKHQQGPYLVI 609
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
P + L++W E S Y G R+ + + + Q K VLLTTY+ +
Sbjct: 610 VPLSTLTNWNLEFDKWAPSVAKVVYKGPP-NARKMQQEKIRQGKFQVLLTTYEYI----- 663
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH-RIIISGTPIQN 476
I D W +MI+DEGH +KN +++ + ++ + S R+I++GTP+QN
Sbjct: 664 -------IKDRPLLSKIKWFHMIIDEGHRMKNANSKLSATIQQYYSTRFRLILTGTPLQN 716
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERI 534
NL ELWA+ NF P + K F E + P G DK L E++I V + L + +
Sbjct: 717 NLAELWAMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVL 774
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDG 593
+P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + + +I +S +G
Sbjct: 775 RPFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQARLYKQMVTHQKIAVSDANG 826
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
A + L+K+C+HP V D +++ +NP + +
Sbjct: 827 GKTGARGLSNMIMQLRKLCNHPF---------VFDEVENQMNPANVS------------- 864
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++++++ + +G
Sbjct: 865 ---------NDLLWRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDFLRFRGLH 915
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+LR+DGTTK+ DR +++ F + D +P +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 916 YLRLDGTTKSEDRSELLRQFNQPD-SPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPH 974
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 975 QDLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARFK 1014
>gi|424066916|ref|ZP_17804377.1| helicase/SNF2 family domain-containing protein [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|408001844|gb|EKG42123.1| helicase/SNF2 family domain-containing protein [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
Length = 914
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 259/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I + ++ L L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRL-----------HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|424071614|ref|ZP_17809037.1| helicase/SNF2 family domain-containing protein [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|407998702|gb|EKG39103.1| helicase/SNF2 family domain-containing protein [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
Length = 914
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 259/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I + ++ L L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRL-----------HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|66045135|ref|YP_234976.1| SNF2-like protein [Pseudomonas syringae pv. syringae B728a]
gi|63255842|gb|AAY36938.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Pseudomonas
syringae pv. syringae B728a]
Length = 914
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 259/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I + ++ L L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRL-----------HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|422642106|ref|ZP_16705526.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae Cit
7]
gi|330954490|gb|EGH54750.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae Cit
7]
Length = 914
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 261/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|440721559|ref|ZP_20901956.1| SNF2-like protein [Pseudomonas syringae BRIP34876]
gi|440724605|ref|ZP_20904885.1| SNF2-like protein [Pseudomonas syringae BRIP34881]
gi|440363422|gb|ELQ00590.1| SNF2-like protein [Pseudomonas syringae BRIP34876]
gi|440369898|gb|ELQ06852.1| SNF2-like protein [Pseudomonas syringae BRIP34881]
Length = 880
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 261/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 398 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 453
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 454 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 509
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 510 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 557
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 558 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 606
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 607 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 648
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 649 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 700
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 701 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 753
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 754 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 810
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 811 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 844
>gi|389637459|ref|XP_003716366.1| DNA repair protein rhp54 [Magnaporthe oryzae 70-15]
gi|22775414|dbj|BAC11858.1| recombinational repair protein [Magnaporthe grisea]
gi|351642185|gb|EHA50047.1| DNA repair protein rhp54 [Magnaporthe oryzae 70-15]
Length = 803
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 176/567 (31%), Positives = 286/567 (50%), Gaps = 66/567 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ ++ +L PHQ EG+++++ C + G I+ D+MGLGKT+Q
Sbjct: 200 PRVPVVIDPRLAKVLRPHQIEGVKFMY--RCVTGMIDEKANGCIMADEMGLGKTLQCITL 257
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
L L I++A+V P +L+ +W EL L A F K + EL
Sbjct: 258 LWTLLKQSPEAGKPAIQKAIVACPSSLVRNWANELVK-WLGADAITPFAIDGKASKEELT 316
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N + L+ + M+ DEGH
Sbjct: 317 RQLRQWAISSGRAVTRPVIIVSYETLRLNVEELKHTKI------------GLMLCDEGHR 364
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN +Q +L + + R+I+SGTPIQN+L E ++L +F P+LLG F++++ELP
Sbjct: 365 LKNGDSQTFTALNNLNVSRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELP 424
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A ++E+ G KEL + + +RR N++ S L K E +V
Sbjct: 425 ILRGRDADASEKERVKGDECLKELLALVNKFIIRR-TNDIL-------SKYLPVKYEHVV 476
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G
Sbjct: 477 FCNLAPFQLDLYNYFITSPDIQALLRGKGSQPLKAIGILKKLCNHPDLLN---LSDDLPG 533
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLI 682
++ P D E +E S K+ + +L ++ + ++ +++
Sbjct: 534 SEAHW-PSDYVPKESRGRD----------REIKPWYSGKMQVLDRMLARIRADTNDKIVL 582
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGL 741
S L+L + ++GY LR+DGT + R K+V+ F + + + +FLL+S+ GG
Sbjct: 583 ISNYTSTLDLFERLCRNRGYGSLRLDGTMNVTKRQKLVDKFNDPEGSEFVFLLSSKAGGC 642
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++Q K
Sbjct: 643 GLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHK 702
Query: 802 GGLFKTATEHKEQI-RYFSQQDLRELL 827
L + E + R+FS L+EL
Sbjct: 703 QSLSSCVVDSAEDVERHFSLDSLKELF 729
>gi|449445882|ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus]
gi|449497618|ref|XP_004160452.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus]
Length = 928
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 187/604 (30%), Positives = 303/604 (50%), Gaps = 85/604 (14%)
Query: 303 MLFPHQREGLRWLW----SLHCQGK---GGILGDDMGLGKTMQICGFLAGLFHS-----R 350
L PHQREG+++++ LH +G G IL DDMGLGKT+Q L L
Sbjct: 180 FLRPHQREGVQFMFECVSGLH-KGTDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKP 238
Query: 351 LIKRALVVAPKTLLSHWIKELTA-VGLSAKIREYFGTCVKTRQ---YELQYVLQDKG--- 403
++K+A++V P +L+S+W E+ VG + C +R+ + + K
Sbjct: 239 MVKKAIIVTPTSLVSNWEAEIKKWVGERVHL---IALCESSREDVVSSIDSFVHPKSSLQ 295
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
VL+ +Y+ R +S S F E+ D +I DE H +KN T ++L +
Sbjct: 296 VLIISYETFRMHS-----SKFSQSESCD------LLICDEAHRLKNDQTLTNRALAALSC 344
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
R+++SGTP+QN+L+E +A+ NF P +LGD F+ YE PI+ G + A + EK++G
Sbjct: 345 RRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEEEKKLG 404
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
+ + EL E++ + LRR + S L K ++ +L+ Q LY F+
Sbjct: 405 AQRSTELSEKVNQFILRR--------TNALLSNHLPPKIVEVICCKLSPLQADLYNHFVQ 456
Query: 584 SEIVLSAF-----DGSPLAALTILKKICDHPLLL--TKRAAEDVLDGMDSMLN--PEDAA 634
S+ V A LA +T LKK+C+HP L+ T ++ G++S + P +
Sbjct: 457 SKNVKRAITEELKQAKILAYITALKKLCNHPKLIYDTIKSGSPGTSGLESCIRFFPPEMF 516
Query: 635 LAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLI 693
A D A + +S K+ + LL L + +++ S + L+L
Sbjct: 517 SGRSGAWTGGDGAWVE--------LSGKMHVLARLLAHLRQRTDDRIVLVSNYTQTLDLF 568
Query: 694 QESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP---IFLLTSQVGGLGLTLTKADR 750
+ + Y +LR+DGTT S R K+VN F D++ +FLL+S+ GG GL L +R
Sbjct: 569 AQLCRERRYPYLRLDGTTSISKRQKLVNRF--NDLSKDEFVFLLSSKAGGCGLNLIGGNR 626
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE 810
+++ DP WNP+ D Q+ R +R GQKK V +YR ++ GT+EEK+Y++Q+ K GL K +
Sbjct: 627 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 686
Query: 811 HK-----EQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE---------HGDQHNMDES 856
Q+ + S +DLR+L S + ++HE+ +G +MDE+
Sbjct: 687 ESTNNLTTQVNFLSSEDLRDLFSFHDN------VRSEIHEKMNCSRCQNCYGRPEDMDEN 740
Query: 857 LEAH 860
L +
Sbjct: 741 LSTN 744
>gi|444912000|ref|ZP_21232169.1| hypothetical protein D187_03896 [Cystobacter fuscus DSM 2262]
gi|444717501|gb|ELW58330.1| hypothetical protein D187_03896 [Cystobacter fuscus DSM 2262]
Length = 982
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 267/538 (49%), Gaps = 91/538 (16%)
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIK 353
+LP + L +Q +G+ WL L G GGIL DDMGLGKT+Q IC L
Sbjct: 532 VLPADLTATLRAYQLQGVSWLGFLKSAGLGGILADDMGLGKTLQTIC---------TLGP 582
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVR 413
R+LVV P ++L +W EL S K+ Y G + + + V +TTY ++R
Sbjct: 583 RSLVVCPTSVLPNWAGELKRFRPSLKVCVYHGPG--------RALDESADVTITTYALLR 634
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
++ L G + WD ++LDE IKNP +Q A++ + + R+ +SGTP
Sbjct: 635 LDAAVLGGRT------------WDAVVLDEAQAIKNPESQVARAAFGLQANFRLALSGTP 682
Query: 474 IQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRER 533
++N L+ELW+L +F P LLG + F+EK PI G A+ LR R
Sbjct: 683 LENRLEELWSLMHFTNPGLLGARRQFEEKVARPIADGQ------------KGAAEGLRRR 730
Query: 534 IQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL---NSEIVLSA 590
I+P+ LRRLK EV E L + E ++ + L +R +Y+A + +E+V
Sbjct: 731 IRPFVLRRLKREVAPE--------LPPRTESVMHVSLDERERSVYDAVMAATRAEVVALL 782
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
+G +VL ++++L AA L
Sbjct: 783 NEGG------------------------NVLKALEALLRLRQAACHSAL----------- 807
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
Q N S K+ ++ L + +GH L+FSQ +L+LI+ + G F R+DG+
Sbjct: 808 -VPGQRANTSSKVQTLVEALGTAVLDGHKALVFSQWTSLLDLIEPHLKMAGIAFDRLDGS 866
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T ++R ++ FQ D AP+ L++ + GG GL LT AD V ++DP WNP+ + Q+ DRA
Sbjct: 867 T--ANRGEVTERFQGQDGAPVLLMSLKAGGTGLNLTAADHVFLMDPWWNPAAEAQAADRA 924
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLS 828
+RIGQ++ V+VYRL++ GTVEE+I Q K LF+ A ++ DL EL +
Sbjct: 925 HRIGQERPVMVYRLVSQGTVEERILGLQEKKRALFEAALSEASTATAITRDDLLELFA 982
>gi|440746586|ref|ZP_20925866.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae
BRIP39023]
gi|440370846|gb|ELQ07711.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae
BRIP39023]
Length = 914
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 261/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|402701447|ref|ZP_10849426.1| putative helicase [Pseudomonas fragi A22]
Length = 900
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 257/504 (50%), Gaps = 68/504 (13%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKRA 355
P + L P+Q EGL W+ SL GGIL DDMGLGKT+Q + L RL + A
Sbjct: 423 PEGLNANLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILCEKNAGRLDRPA 482
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
+VV P +L+ +W+ E K+ +G TR+ ++ L D V+LTTY ++ +
Sbjct: 483 MVVMPTSLIPNWLDEAAHFTPQLKVLALYGA---TRKKHFEH-LNDYDVILTTYALLPKD 538
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
+ L ++LDE IKNP ++ +++ E+ + R+ +SGTP++
Sbjct: 539 IEQLAKLPL------------HVLVLDEAQYIKNPGSKASQAACELNARQRLCLSGTPLE 586
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILR-GNDKHALDREKRIGSAVAKELRERI 534
N+L ELW+LF+F P LGD K F Y +PI R G+D+ + L RI
Sbjct: 587 NHLGELWSLFHFLLPGWLGDVKTFNRDYRVPIERQGSDERL------------QHLNARI 634
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS 594
+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 635 KPFLLRRTKEQVATE--------LPPKTEIIHWVDLNEAQRDVYETM------------- 673
Query: 595 PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQE 654
L + KK+ D + K + ++++L KL D+ D
Sbjct: 674 ---RLAMDKKVRDE--ITRKGVGRSQIIILEALL---------KLRQVCCDLRLVSDTPP 719
Query: 655 QHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKAS 714
+ + S K+ ++ +L++L EG +L+FSQ ML LI+ + + ++ + G T+
Sbjct: 720 KKGSTSGKLDSLMLMLEELFAEGRRILLFSQFTSMLGLIEAELQKRKVRYAILTGQTR-- 777
Query: 715 DRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIG 774
DR V DFQ G + IFL++ + GG+GL LT+AD VI DP WNP+ +NQ+ DRAYRIG
Sbjct: 778 DRRAPVKDFQSGTLQ-IFLISLKAGGVGLNLTEADTVIHYDPWWNPAAENQATDRAYRIG 836
Query: 775 QKKDVVVYRLMTCGTVEEKIYRKQ 798
Q+K V VY+++ GTVEEKI Q
Sbjct: 837 QEKPVFVYKMIARGTVEEKIQHLQ 860
>gi|320169825|gb|EFW46724.1| DNA repair protein RAD54 [Capsaspora owczarzaki ATCC 30864]
Length = 941
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 175/591 (29%), Positives = 305/591 (51%), Gaps = 75/591 (12%)
Query: 280 EDEGSITLSGPRSTYMLP-------------GKIGNMLFPHQREGLRWLWSLH----CQG 322
+DEG++ L P T LP + +L HQREG+++L+ +G
Sbjct: 224 DDEGALVLFAPEKTSALPLDPKTKEVHVVVDPMLTKVLRLHQREGVKFLYDAVMGDIVEG 283
Query: 323 -KGGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKELTAVGL 376
+G I+ D+MGLGKT+Q + L I++A+++ P +L+ +W EL L
Sbjct: 284 YQGCIMADEMGLGKTLQCVSLIWTLLRQGRNGMPTIEKAVIICPASLVKNWHNELQK-WL 342
Query: 377 SAKIREY---FGTCVKTRQYELQYV-----LQDKGVLLTTYDIVRNNSKSLRGSSFISDE 428
K++ G K ++ L ++ +L+ +Y+ R + S
Sbjct: 343 QGKVQSLPVDGGDKEKIESNLNNFINCTGRLLNQPILIISYETFR-----IHVDILASKP 397
Query: 429 AGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFC 488
G +I DEGH +KN +Q ++L ++ + R+++SGTPIQN+L E ++L F
Sbjct: 398 VG-------LVICDEGHRLKNAQSQTFQALNQLKTDRRVLLSGTPIQNDLTEYFSLLLFT 450
Query: 489 CPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFH 548
P LLG F+ ++E PILRG + A D+EK IG+ +EL + + + +RR + +
Sbjct: 451 NPGLLGTQAEFRRRFENPILRGREASATDKEKEIGTEKLQELAKIVNKFIIRRTNSLL-- 508
Query: 549 EDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSE-----IVLSAFDG---SPLAALT 600
S L K + +V ++L+ Q QLYEA + S+ I SA DG + L ++T
Sbjct: 509 ------SKYLPTKVDQVVCIKLSPLQTQLYEALIKSKAVKKLIASSASDGQTAASLGSIT 562
Query: 601 ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNIS 660
+LKK+C+HP L+ + E+ + + L P + + K + A FQ +
Sbjct: 563 LLKKLCNHPDLIYEACQENFRELLP--LFPPEYGVKNKRGRTF-NPAHSGKFQV----LD 615
Query: 661 CKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIV 720
++++ S + V++ S + ++L ++ +GY+F+R+DGT R K+V
Sbjct: 616 TMLAYVKSTTND------RVVLISNYTQTIDLFEDLARLRGYRFVRLDGTLSVKARQKLV 669
Query: 721 NDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDV 779
++F +FLL+S+ GG G+ L +R+++ DP WNP++D Q++ R +R GQKK V
Sbjct: 670 DEFNNPSSNVFLFLLSSKAGGCGINLIGGNRLVLFDPDWNPASDGQAMARVWRDGQKKKV 729
Query: 780 VVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
+YR + GT+EEKI+++Q K L + +E + R+F+ ++LR+L +L
Sbjct: 730 YLYRFLGTGTIEEKIFQRQAHKMALSSCVVDEEENVERHFTSENLRDLFTL 780
>gi|298159042|gb|EFI00102.1| helicase/SNF2 family domain protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 914
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 261/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|422675515|ref|ZP_16734858.1| SNF2-related:helicase [Pseudomonas syringae pv. aceris str.
M302273]
gi|330973232|gb|EGH73298.1| SNF2-related:helicase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 880
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 261/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 398 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 453
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 454 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 509
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 510 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 557
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 558 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 606
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 607 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 648
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 649 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDLPVNSKQ 700
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 701 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 753
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 754 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 810
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 811 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 844
>gi|448124749|ref|XP_004205004.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
gi|358249637|emb|CCE72703.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
Length = 836
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 189/632 (29%), Positives = 309/632 (48%), Gaps = 90/632 (14%)
Query: 234 DDEDDCVIVSGKLVVNRPDRRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRST 293
D E+ I + ++ V RP +R + H L +L + ++ P
Sbjct: 188 DQENKENIENKEIPVERPSKR-----RRTHKSLAEIL------GICKNPEDALAKYPDVP 236
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLAGLFH 348
++ K+ +L PHQ G+R+L+ + KG I+ D+MGLGKT+Q + L
Sbjct: 237 VVIDPKLAKILRPHQVAGVRFLYRCTAGLVDPKAKGCIMADEMGLGKTLQCLTLMWTLLK 296
Query: 349 S-----RLIKRALVVAPKTLLSHWIKE---------LTAVGLSAKIREYFGTCVKTRQYE 394
+ I++ ++V P +L+ +W E LT + + K T+ +
Sbjct: 297 QSPRGKKTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAIDGK---------STKSSD 347
Query: 395 LQYVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEG 444
L LQ + VL+ +Y+ +R N L G+ M+ DEG
Sbjct: 348 LSGALQQWAVASGRNIVRPVLIISYETLRRNVDKLAGTHV------------GLMLADEG 395
Query: 445 HLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYE 504
H +KN + +L + R+I+SGTPIQN+L E ++L NF P LG F++ +E
Sbjct: 396 HRLKNSDSLTFTALNSLRCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGSRNDFRKNFE 455
Query: 505 LPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEM 564
ILRG D A + EK G EL + + + +RR N++ + L K E
Sbjct: 456 NDILRGRDADATEDEKNKGDKKLTELTQLVSKFIIRR-TNDILAQ-------YLPIKYEY 507
Query: 565 IVWLRLTSCQRQLYEAFLNS-EI--VLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVL 621
+V++ L+ Q++LY F+ S EI +L PL A+ +LKK+C+HP LL+ +
Sbjct: 508 VVFVGLSDMQKELYRHFITSPEIKKLLRGVGSQPLKAIGMLKKLCNHPDLLSLPGD---I 564
Query: 622 DGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-V 680
+G + + PED +I +E S K S + L KL E ++ +
Sbjct: 565 EGSEKYI-PED---------YIPVSGGHGRNKEVQTWFSGKFSILERFLYKLRVETNDKI 614
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQV 738
++ S + L+LI++ +K Y LR+DGT + R K+V+ F + + P IFLL+S+
Sbjct: 615 VLISNYTQTLDLIEKMCRTKRYGSLRLDGTMNINKRQKLVDRFNDPE-GPEFIFLLSSKA 673
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKKD +YR ++ GT+EEKI+++Q
Sbjct: 674 GGCGINLIGANRLILIDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQ 733
Query: 799 IFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
K L + KE + R FS +L++L
Sbjct: 734 SMKLSLSSCVVDEKEDVERLFSADNLKQLFEF 765
>gi|443644558|ref|ZP_21128408.1| Helicase/SNF2 family domain protein [Pseudomonas syringae pv.
syringae B64]
gi|443284575|gb|ELS43580.1| Helicase/SNF2 family domain protein [Pseudomonas syringae pv.
syringae B64]
Length = 914
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 259/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 432 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 487
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 488 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 543
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 544 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 591
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I + ++ L L
Sbjct: 592 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRL-----------HHL 640
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 641 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 682
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 683 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 734
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 735 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 787
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 788 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 844
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 845 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 878
>gi|365983656|ref|XP_003668661.1| hypothetical protein NDAI_0B03840 [Naumovozyma dairenensis CBS 421]
gi|343767428|emb|CCD23418.1| hypothetical protein NDAI_0B03840 [Naumovozyma dairenensis CBS 421]
Length = 1363
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/558 (30%), Positives = 282/558 (50%), Gaps = 87/558 (15%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + LF S+ LV+
Sbjct: 453 VGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLFESKKEPGPFLVI 512
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S Y GT + R + + + VLLTTY+ +
Sbjct: 513 VPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRRSLQHEIRNGNFDVLLTTYEYI------ 566
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D+A W +MI+DEGH +KN ++ + ++ + +R+I++GTP+QNN
Sbjct: 567 ------IKDKALLSKHDWAHMIIDEGHRMKNAQSKLSYTISHYYRTRNRLILTGTPLQNN 620
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P++ K F++ + P + L+ + V + L + ++P+
Sbjct: 621 LPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLVIRRLHKVLRPF 680
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFDGSP 595
LRRLK EV E D L K E ++ +L+ Q+QLYE L N+ V + +G+
Sbjct: 681 LLRRLKKEV--EKD------LPDKVEKVIKCKLSGLQQQLYEQMLKHNALFVGAGTEGAT 732
Query: 596 LAAL-------TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
+ L+KIC+HP V D ++ ++NP
Sbjct: 733 KTGIKGLNNKIMQLRKICNHPF---------VFDEVEGVVNPSRG--------------- 768
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+ ++ +++ LLD+++P+ GH VL+F Q ++++++++ + K K+
Sbjct: 769 -------NSDVLYRVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKY 821
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
+R+DG+TKA DR ++ +F AP FLL+++ GGLGL L AD VI+ D WN
Sbjct: 822 MRLDGSTKADDRTGMLKEFN----APNSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWN 877
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLF---KT 807
P D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F T
Sbjct: 878 PHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKST 937
Query: 808 ATEHKEQIRYFSQQDLRE 825
A E +E +R + ++R+
Sbjct: 938 AEEQEEFLRKLLENEMRD 955
>gi|340368580|ref|XP_003382829.1| PREDICTED: TATA-binding protein-associated factor 172 [Amphimedon
queenslandica]
Length = 1837
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 186/587 (31%), Positives = 280/587 (47%), Gaps = 80/587 (13%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +AG R +
Sbjct: 1216 YKVPVPIKAELRKYQQDGINWLAFLNKYQVHGILCDDMGLGKTLQSICIIAGDTFDRKKQ 1275
Query: 354 R------------ALVVAPKTLLSHWIKELTAVGLSAKIR--EYFGT-CVKTRQYELQYV 398
++V+ P TL HW E+ + +Y G V+ R LQ V
Sbjct: 1276 YEATGHPDCSPLPSIVICPPTLTGHWYYEVKKFCELEHLNPIQYCGPPAVRGR---LQKV 1332
Query: 399 LQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL 458
+ D +++ +YDIVRN+ G W+Y +LDEGH+IKN T+ K++
Sbjct: 1333 VSDYDLVIVSYDIVRNDIDFFSGIH------------WNYCVLDEGHIIKNTKTKVTKAV 1380
Query: 459 LEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDR 518
+ + HR+I+SGTPIQNN+ ELW+LF+F P LG + F +Y PI+ D + +
Sbjct: 1381 KSLLANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEQHFNIRYGHPIVLSRDAKSSSK 1440
Query: 519 EKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY 578
E+ G+ + L ++ P+ LRR+K +V + L K L+ Q LY
Sbjct: 1441 EQEAGALAMEALHRQVLPFLLRRMKEDVLQD--------LPPKIIQDYHCDLSPLQVLLY 1492
Query: 579 EAFLNSEIVLSAFD--------------------------GSPLAALTILKKICDHPLLL 612
E F S + D G AL L+K+C+HPLL+
Sbjct: 1493 EDFAQSRAKQNVEDTVYEGTAGADDSEPPEKKKKKSNPAQGHVFQALQYLRKVCNHPLLV 1552
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
+ + D + LN ++ L + I A+ ++ + + + SL D
Sbjct: 1553 VNK-DHPLYDNVMKFLNKDNTTLHD-----ITHSAKLLALKQLLNECGIGTNDVDSLSDA 1606
Query: 673 LIPEG------HNVLIFSQTRKMLNLIQE---SIGSKGYKFLRIDGTTKASDRVKIVNDF 723
I G H VL+F Q + +L++I+ + +LR+DG+ DR +V+ F
Sbjct: 1607 CIDGGGSVVSQHRVLLFCQYKTILDIIERDLLKVHMPSVTYLRLDGSVPPKDRHDLVHRF 1666
Query: 724 QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYR 783
+ LLT+ VGGLGL LT AD VI + WNP+ D Q++DRA+RIGQK+ V VYR
Sbjct: 1667 NMDPSIDLLLLTTHVGGLGLNLTGADTVIFFEHDWNPTKDLQAMDRAHRIGQKRVVNVYR 1726
Query: 784 LMTCGTVEEKIYRKQIFKGGLFKT-ATEHKEQIRYFSQQDLRELLSL 829
L+T GT+EEKI Q FK + T T+ + + D +L L
Sbjct: 1727 LITRGTLEEKIMSLQKFKLNIANTVVTQENNSLLSMNTSDFLDLFQL 1773
>gi|113673906|ref|NP_001038240.1| probable global transcription activator SNF2L2 isoform 2 [Danio
rerio]
Length = 1568
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 174/554 (31%), Positives = 273/554 (49%), Gaps = 74/554 (13%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HS 349
+ST+++ G + +Q +GL W+ SL+ GIL D+MGLGKT+Q G + L H
Sbjct: 717 QSTFLINGTLKQ----YQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEHK 772
Query: 350 RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
RL L++ P + LS+W+ EL S Y GT R Q VL+TTY
Sbjct: 773 RLNGPYLIIVPLSTLSNWVYELDKWAPSIVKIAYKGTPSMRRSLVPQLRSGKFNVLITTY 832
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRII 468
+ + I D+ W YMI+DEGH +KN + + L + R++
Sbjct: 833 EYI------------IKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLL 880
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
++GTP+QN L ELWAL NF P + F++ + P ++ L+ E+ I + +
Sbjct: 881 LTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETI--LIIR 938
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
L + ++P+ LRRLK EV + L +K E ++ +++ Q+ LY I+L
Sbjct: 939 RLHKVLRPFLLRRLKKEV--------ESQLPEKVEYVIKCDMSAIQKVLYRHMQGKGILL 990
Query: 589 SAFDGSP------------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
+ DGS + + LKKIC+HP M + + A
Sbjct: 991 T--DGSEKDKKGKGGAKTLMNTIMQLKKICNHPY----------------MFQHIEESFA 1032
Query: 637 EKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQES 696
E L ++ D ++ S K + +L KL H VL+F Q ++ ++++
Sbjct: 1033 EHLGFPNGIISGPDLYR-----ASGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDY 1087
Query: 697 IGSKGYKFLRIDGTTKASDRVKIVNDF-QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVD 755
G + + +LR+DGTTK+ DR ++ F +EG IFLL+++ GGLGL L AD V++ D
Sbjct: 1088 FGYRNFLYLRLDGTTKSEDRAMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFD 1147
Query: 756 PAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFK 806
WNP D Q+ DRA+RIGQ+ +V V RL T +VEEKI Y+ +++ + G+F
Sbjct: 1148 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1207
Query: 807 TATEHKEQIRYFSQ 820
+ E+ R F Q
Sbjct: 1208 QKSSSHER-RAFLQ 1220
>gi|332834962|ref|XP_003312799.1| PREDICTED: TATA-binding protein-associated factor 172 [Pan
troglodytes]
Length = 1828
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 189/583 (32%), Positives = 281/583 (48%), Gaps = 98/583 (16%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q LAG R +
Sbjct: 1256 YKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQE 1315
Query: 354 RA------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
A LVV P TL HW+ E+ + T T + LQ+ ++
Sbjct: 1316 YARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKR 1375
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
+++ +YD+VRN+ R F +Y ILDEGH+IKN T+ +K++ ++
Sbjct: 1376 HNLIVASYDVVRNDIDFFRNIKF------------NYCILDEGHVIKNGKTKLSKAVKQL 1423
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ +RII+SGTPIQNN+ ELW+LF+F P LG + F +Y PIL D + RE+
Sbjct: 1424 TANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQE 1483
Query: 522 IGSAVAKELRERIQPYF--LRRLKNEVFHE----------DDVTSSATLSKKNEMIVWLR 569
+ IQ Y+ L L+ +++ + D+ SSATLS++ E
Sbjct: 1484 AXXXXXXXXXKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEETE------ 1537
Query: 570 LTSCQRQLYEAFLNSEIVLSAFDGSPLAALTILKKICDHP-LLLTKRAAEDVLDGMDSML 628
+ L A G AL L+K+C+HP L+LT +
Sbjct: 1538 ---------------KPKLKA-TGHVFQALQYLRKLCNHPALVLTPQ------------- 1568
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLL--------------DKLI 674
+PE AEKLA+ + + D Q + K+S + LL + +
Sbjct: 1569 HPEFKTTAEKLAVQNSSL---HDIQH-----APKLSALKQLLLDCGLGNGSTSESGTESV 1620
Query: 675 PEGHNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPI 731
H +LIF Q + ML++++ + +LR+DG+ R IV+ F +
Sbjct: 1621 VAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDV 1680
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
LLT+ VGGLGL LT AD V+ V+ WNP D Q++DRA+RIGQK+ V VYRL+T GT+E
Sbjct: 1681 LLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLE 1740
Query: 792 EKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQDLRELLSLPKQG 833
EKI Q FK + T ++ ++ L +L +L K G
Sbjct: 1741 EKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDG 1783
>gi|326479975|gb|EGE03985.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Trichophyton equinum CBS 127.97]
Length = 1352
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 265/519 (51%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + L ++ LV+
Sbjct: 520 VGGTLKEYQLRGLTWMISLYNNNLNGILADEMGLGKTIQTISLITYLIETKKQNGPYLVI 579
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G V +Q++ + VLLTTY+ +
Sbjct: 580 VPLSTLTNWNLEFEKWAPSITRIVYKGPQVTRKQHQQAIRWGNFQVLLTTYEFI------ 633
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L S +R+I++GTP+QNN
Sbjct: 634 ------IKDRPILSKVKWLHMIVDEGHRMKNAGSKLSFTLTNYYQSRYRLILTGTPLQNN 687
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P D+ L E+++ V + L + ++
Sbjct: 688 LPELWALLNFALPNIFKSVKSFDEWFNTPFANTGSQDRMELTEEEQL--LVIRRLHKVLR 745
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG-- 593
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ + L+ DG
Sbjct: 746 PFLLRRLKKDV--EKD------LPEKQERVIRCRFSALQAKLYKQLVTHN-KLAVSDGKG 796
Query: 594 --SPLAALT----ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
+P+ L+ L+K+C+HP V D ++ LNP A
Sbjct: 797 GKTPVRGLSNMLMQLRKLCNHPF---------VFDSVEEELNPGKAT------------- 834
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K
Sbjct: 835 ---------NDLIWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFLRFRGMK 885
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+LR+DG TK+ DR ++ F E + FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 886 YLRLDGATKSDDRSDLLRRFNEPESEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 945
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEE+I + FK
Sbjct: 946 DLQAQDRAHRIGQKNEVRILRLISSNSVEERILERAQFK 984
>gi|238878261|gb|EEQ41899.1| DNA repair and recombination protein RAD54 [Candida albicans WO-1]
Length = 848
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 178/567 (31%), Positives = 288/567 (50%), Gaps = 59/567 (10%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P ++ K+ +L PHQ G+++L+ + + KG I+ D+MGLGKT+Q +
Sbjct: 242 PDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARAKGCIMADEMGLGKTLQCLTLMW 301
Query: 345 GLFHS-----RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVL 399
L R I++ ++V P +L+ +W E+ + T+ EL L
Sbjct: 302 TLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKNSELGTAL 361
Query: 400 QD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
Q + VL+ +Y+ +R N L G+ E G M+ DEGH +KN
Sbjct: 362 QQWSTAQGRNIVRPVLIISYETLRRNVDKLAGT-----EVG-------LMLADEGHRLKN 409
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
+ +L + R+I+SGTPIQN+L E ++L NF P LG FK+ YE IL+
Sbjct: 410 GDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRIEFKKNYENAILK 469
Query: 510 GNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR 569
G D A D E+ G EL + + + +RR N++ S L K E +++
Sbjct: 470 GRDSTASDEEREKGDKKLNELSQMVSKFIIRR-TNDIL-------SKYLPIKYEYVLFTG 521
Query: 570 LTSCQRQLYEAFLNSEIVLSAFDGS---PLAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
L+ Q+ +Y F+ S + G+ PL A+ +LKK+C+HP LL EDV +G +
Sbjct: 522 LSPMQKDIYNHFITSPEIKKLMKGTGSQPLKAIGMLKKLCNHPDLLD--LPEDV-EGSEE 578
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQ 685
+ P+D + IA + + +E S K + L K+ E + +++ S
Sbjct: 579 FI-PDDYQSS------IAGGSASRN-REIQTWFSGKFLILERFLQKINKETDDKIVLISN 630
Query: 686 TRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGL 743
+ L+LI++ K Y LR+DGT + R K+V+ F + + P IFLL+S+ GG G+
Sbjct: 631 YTQTLDLIEKMCRYKKYGVLRLDGTMNINKRQKLVDKFNDPN-GPEFIFLLSSKAGGCGI 689
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
L A+R++++DP WNP++D Q++ R +R GQKKD +YR ++ GT+EEKI+++Q K
Sbjct: 690 NLIGANRLVLMDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMS 749
Query: 804 LFKTATEHKEQI-RYFSQQDLRELLSL 829
L + KE + R FS +LR+L
Sbjct: 750 LSSCVVDEKEDVERLFSVANLRQLFKF 776
>gi|422617243|ref|ZP_16685946.1| SNF2-related:helicase, partial [Pseudomonas syringae pv. japonica
str. M301072]
gi|330897626|gb|EGH29045.1| SNF2-related:helicase, partial [Pseudomonas syringae pv. japonica
str. M301072]
Length = 559
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 177/514 (34%), Positives = 262/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 77 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 132
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 133 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 188
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 189 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 236
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 237 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 285
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE V A
Sbjct: 286 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET------VRLA 331
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
D KK+ D + K A + ++++L +L V K
Sbjct: 332 MD----------KKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 379
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 380 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 432
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 433 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 489
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 490 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 523
>gi|237797684|ref|ZP_04586145.1| SNF2-related:helicase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020534|gb|EGI00591.1| SNF2-related:helicase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 918
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 174/514 (33%), Positives = 261/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 436 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 491
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 492 LDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 547
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 548 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 595
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 596 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 644
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 645 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 686
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L +D
Sbjct: 687 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLV-------NQD 731
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 732 MPANSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 791
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 792 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 848
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 849 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882
>gi|322707957|gb|EFY99534.1| recombinational repair protein [Metarhizium anisopliae ARSEF 23]
Length = 807
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 173/570 (30%), Positives = 288/570 (50%), Gaps = 62/570 (10%)
Query: 285 ITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQI 339
+T P+ +L K+ +L PHQ EG+++++ + + G I+ D+MGLGKT+Q
Sbjct: 199 VTKEQPQVPVVLDPKLAKILRPHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQC 258
Query: 340 CGFLAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQY 393
+ L I++A+VV P +L+ +W ELT L A F K +
Sbjct: 259 ITLMWTLLKQSPEAGKPTIQKAIVVCPASLVKNWANELTK-WLGANAITPFAIDGKASKE 317
Query: 394 ELQYVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDE 443
EL L+ + V++ +Y+ +R N + L+ + + DE
Sbjct: 318 ELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI------------GLLFCDE 365
Query: 444 GHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKY 503
GH +KN + +L + + R+I++GTPIQN+L E ++L +F P+LLG F++++
Sbjct: 366 GHRLKNSDSNTFNALNSLDVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGSRLEFRKRF 425
Query: 504 ELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNE 563
E+PILRG D A + +++ G EL + + +RR N++ S L K E
Sbjct: 426 EIPILRGRDADASESDRQRGDVCTAELLGIVNKFLIRR-TNDIL-------SKYLPVKYE 477
Query: 564 MIVWLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDV 620
+V+ ++ Q LY F+ S + + G PL A+ ILKK+C+HP LL D
Sbjct: 478 HVVFCGVSPFQESLYNYFITSPDIQALLRGKGSQPLKAINILKKLCNHPDLLN---LSDD 534
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN- 679
L G + PE +I A D ++ S K+ + +L ++ + ++
Sbjct: 535 LPGSECCFPPE----------YIPKEARGRD-RDVRPEYSGKMMVLDRMLARIRQDTNDK 583
Query: 680 VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQV 738
+++ S L+L + S+ Y LR+DGT + R K+V+ F + + +FLL+S+
Sbjct: 584 IVLISNYTSTLDLFERLCRSREYGCLRLDGTMNVNKRQKLVDRFNDPNGEEFVFLLSSKA 643
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 644 GGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQ 703
Query: 799 IFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 704 SHKQSLSSCVVDSAEDVERHFSLDSLRELF 733
>gi|291383503|ref|XP_002708309.1| PREDICTED: RAD26L hypothetical protein-like [Oryctolagus cuniculus]
Length = 1644
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 181/592 (30%), Positives = 273/592 (46%), Gaps = 111/592 (18%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH------- 348
+P I L +QREG ++L+ + QG+G ILGDDMGLGKT+Q+ FLA + H
Sbjct: 104 IPYTINRYLRDYQREGTQFLYGHYRQGRGCILGDDMGLGKTVQVISFLAAVLHKKGTRED 163
Query: 349 ------------------SRLIKRA-LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCV- 388
S + K+ L+VAP ++L +W EL G YF V
Sbjct: 164 IENNMPEFLLRSMKKELPSSMTKKMFLIVAPLSVLYNWKDELDTWG-------YFRVTVL 216
Query: 389 --KTRQYELQYVLQDKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGH 445
+ EL + Q K + LTTY+ +R DE + W +I+DE H
Sbjct: 217 HGNRKDNELMRIKQRKCEIALTTYETLR----------LCLDELNSLE--WSAIIVDEAH 264
Query: 446 LIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYEL 505
IKNP + + + + RI ++GT +QNN+KELW + ++ P LLG FK+++
Sbjct: 265 RIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSD 324
Query: 506 PILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMI 565
P+ G A RE G + L R+ FLRR K + + L KK + +
Sbjct: 325 PVEHGQRHTATKRELATGRKAMRRLAGRMAGSFLRRTKTLIKDQ--------LPKKEDRM 376
Query: 566 VWLRLTSCQRQLYEAFLNSEIVLSAFDGSP----------------------------LA 597
V+ LT Q+ +Y+ L +E V S L+
Sbjct: 377 VYCSLTEFQKAVYQTVLETEDVTLILQSSKPCTCNSGRKRRSCCYKTNSRGDEVKTLCLS 436
Query: 598 ALTILKKICDHPLL-----------LTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
LT+L+K+ +H L L KR + V + A E L+
Sbjct: 437 YLTVLQKVANHVALLQAASTSKQETLIKRICDQVFSKFPDFVQKSKDAAFETLS------ 490
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLR 706
S K+ + LL+ VL+FS + K+L+++Q+ + G + R
Sbjct: 491 ---------DPKYSGKMKVLQQLLNHCRRNRDKVLLFSFSTKLLDVLQQYCMASGLDYRR 541
Query: 707 IDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
+DG+TK+ +R+KIV +F I L+++ GGLGL A+ VI+ DP WNP+ D Q+
Sbjct: 542 LDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQA 601
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
+DRAYRIGQ +DV V RL++ GTVEE +Y +Q++K L + RYF
Sbjct: 602 IDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQLYKQQLHCVVVGSENAKRYF 653
>gi|253721987|gb|ACT34057.1| Mot1 [Aegilops tauschii]
Length = 2051
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 273/534 (51%), Gaps = 77/534 (14%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-LFHSRLIK-----RALVVAP 360
+Q+EG+ WL L GIL DDMGLGKT+Q +A + SR ++L++ P
Sbjct: 1465 YQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVASDIAESRARNDDKDPKSLIICP 1524
Query: 361 KTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
TL++HW E+ S+ ++ +Y G+ Q+ DK V++T+YDI+R +
Sbjct: 1525 STLVAHWEYEVEKYIDSSIMKPLQYIGSSQDRMTLRAQF---DKFNVIITSYDIIRKDID 1581
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
L + IW+Y +LDEGH+IKN ++ ++ ++ + HR+I+SGTPIQNN
Sbjct: 1582 FL------------ESVIWNYCVLDEGHIIKNSRSKITSAVKQLKAQHRLILSGTPIQNN 1629
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
+ ELW+LF+F P LG K F+ Y P++ D ++ G + L +++ P+
Sbjct: 1630 VLELWSLFDFLMPGFLGTEKQFQSTYGKPLIAAKDSKCSAKDAEAGILAMEALHKQVMPF 1689
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR---LTSCQRQLYEAFLNSEI------VL 588
LRR K+EV LS E I+ R L+ Q +LY+ F +S + ++
Sbjct: 1690 LLRRTKDEV-----------LSDLPEKIIQDRHCNLSHLQLKLYDKFSSSNVKEEISTIV 1738
Query: 589 SAFDGSP-----------LAALTILKKICDHPLLLTKRAAEDVL------DGMDSMLNPE 631
A + P AL L K+C HPLL+ + D + GM +
Sbjct: 1739 KADESEPSTSQPKATRHVFQALQYLLKLCSHPLLVIGESPPDYIVEHLKEIGMGTGDELH 1798
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-HNVLIFSQTRKML 690
+ + KL VA ++ QE C I +S D G H VLIF+Q + L
Sbjct: 1799 ELHHSPKL------VALQEILQE------CGIGSEISSPDASAAVGQHRVLIFAQHKAFL 1846
Query: 691 NLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
++I++ + + +LR+DG+ + R +IV F + LLT+ VGGLGL LT
Sbjct: 1847 DIIEKDLFQSHMRSVTYLRLDGSVQTDKRFEIVKTFNSDPTIDVLLLTTHVGGLGLNLTS 1906
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
AD ++ ++ WNP D Q++DRA+R+GQ+K V V+RL+ GT+EEK+ Q FK
Sbjct: 1907 ADTLVFMEHDWNPMKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFK 1960
>gi|422633804|ref|ZP_16698925.1| SNF2-related:helicase, partial [Pseudomonas syringae pv. pisi str.
1704B]
gi|330944324|gb|EGH46382.1| SNF2-related:helicase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 468
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 177/514 (34%), Positives = 262/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL GG+L DDMGLGKT+Q L AG R
Sbjct: 17 LPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTLAHLLMEKQAG----R 72
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 73 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 128
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 129 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 176
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 177 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 225
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE V A
Sbjct: 226 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET------VRLA 271
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
D KK+ D + K A + ++++L +L V K
Sbjct: 272 MD----------KKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 319
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 320 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 372
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 373 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 429
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 430 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 463
>gi|408389789|gb|EKJ69216.1| hypothetical protein FPSE_10614 [Fusarium pseudograminearum CS3096]
Length = 805
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 288/568 (50%), Gaps = 68/568 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ ++ +L PHQ EG+++++ C + G I+ D+MGLGKT+Q
Sbjct: 202 PRVPVVIDPRLAKILRPHQVEGVKFMY--QCVTGLIDEKANGCIMADEMGLGKTLQCISL 259
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
+ L I++A+VV P +L+ +W ELT L A F K + EL
Sbjct: 260 MWTLLKQSPDAGKSTIQKAIVVCPASLVKNWANELTK-WLGANAINPFAIDGKASKDELT 318
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N + L+ + + DEGH
Sbjct: 319 RQLRQWAHATGRSVTRPVIIVSYETLRLNVEELKNTKI------------GLLFCDEGHR 366
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN + +L + + R+I++GTPIQN+L E ++L +F P+LLG F+++YE+P
Sbjct: 367 LKNSDSNTFNALNSLNVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIP 426
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A + +++ G L + + +RR N++ S L K E +V
Sbjct: 427 ILRGRDADASEADRKKGDECTAALLGVVNKFLIRR-TNDIL-------SKYLPVKYEHVV 478
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G
Sbjct: 479 FCNLAPFQFDLYNYFIKSPEIQALLRGKGSQPLKAINILKKLCNHPDLLN---MSDDLPG 535
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLI 682
+ P+D ++ A D +E S K++ + +L ++ + ++ +++
Sbjct: 536 SEKCY-PDD---------YVPKEARGRD-REVKSWYSGKMAVLDRMLARIRQDTNDKIVL 584
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQVGG 740
S L+L ++ S+ Y LR+DGT + R K+V+ F EGD IFLL+S+ GG
Sbjct: 585 ISNYTSTLDLFEKLCRSRQYGSLRLDGTMNVNKRQKLVDRFNDPEGDEF-IFLLSSKAGG 643
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 644 CGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSH 703
Query: 801 KGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 704 KQSLSSCVVDSAEDVERHFSLDSLRELF 731
>gi|406862002|gb|EKD15054.1| SNF2 family domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 864
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 286/569 (50%), Gaps = 70/569 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++++ + G I+ D+MGLGKT+Q +
Sbjct: 261 PKVPVVIDPRLSKVLRPHQIEGVKFMYRCVTGMIEDNANGCIMADEMGLGKTLQCIALMW 320
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A++ P +L+ +W EL L + F K + ELQ
Sbjct: 321 TLLKQSPEAGKPTIQKAIIACPSSLVKNWANELVK-WLGPDAIQPFAIDGKASKEELQQQ 379
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + V++ +Y+ +R N + L+ + M+ DEGH +K
Sbjct: 380 LRQWAIASGRSVTRPVIIVSYETLRLNVEELKNTKI------------GLMLCDEGHRLK 427
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + + R+I+SGTPIQN+L E ++L +F P LLG F++KYELPIL
Sbjct: 428 NGDSQTFTALNGLNVSRRVILSGTPIQNDLTEYFSLISFANPGLLGTRMEFRKKYELPIL 487
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
+G D D++++ G +EL + + +RR N++ S L K E +V+
Sbjct: 488 KGRDAAGSDKDRQKGDDTVRELLGIVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 539
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F++S + + G PL A+ +LKK+C+HP LL ED L G D
Sbjct: 540 NLAPFQLDLYNHFISSPDIKALLRGKGSQPLKAIGLLKKLCNHPDLLN--LPED-LPGCD 596
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
L P+D E + + +I S + +LD+++ +
Sbjct: 597 KYL-PDDYVPKES--------------RGRDRDIRPWYSGKMQVLDRMLARIRQDTNDKI 641
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
++ S + L++ + +GY LR+DGT + R K+V+ F + + +FLL+S+ G
Sbjct: 642 VLISNYTQTLDMFDKLCRDRGYGSLRLDGTMNVTKRQKLVDRFNNPEGSEFVFLLSSKAG 701
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 702 GCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQS 761
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+F+ LREL
Sbjct: 762 HKQSLSSCVVDSAEDVERHFTLDSLRELF 790
>gi|302693046|ref|XP_003036202.1| hypothetical protein SCHCODRAFT_50771 [Schizophyllum commune H4-8]
gi|300109898|gb|EFJ01300.1| hypothetical protein SCHCODRAFT_50771, partial [Schizophyllum commune
H4-8]
Length = 1898
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 272/552 (49%), Gaps = 74/552 (13%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y +P + L +Q++G+ WL L GIL DDMGLGKT+Q LA H R +
Sbjct: 1294 YEIPVSVKAELRKYQQDGVNWLAFLAKYQLHGILCDDMGLGKTLQSICILASKHHERAER 1353
Query: 354 ------------RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
+L++ P TL HW E+ + +R T + ++ L+
Sbjct: 1354 FKETQSPDAVHLPSLIICPPTLTGHWYYEI--LKYVENLRPVLYTGNARERTKILSKLKS 1411
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+Y++VRN+ SL + W Y ILDEGH+IKN T+ K++ +
Sbjct: 1412 YDVVITSYEVVRNDISSL------------GNIQWLYCILDEGHVIKNAKTKLTKAVKSL 1459
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
S HR+I+SGTPIQNN+ ELW+LF+F P LG F E++ PIL D + +
Sbjct: 1460 NSQHRLILSGTPIQNNVLELWSLFDFLMPGFLGTESSFNERFGKPILSNRDGKS--KNGE 1517
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
+ + L +++ P+ LRRLK +V ++ L K + L+ Q+ +Y+ F
Sbjct: 1518 AAALALEALHKQVLPFLLRRLKEDVLND--------LPPKIIQDYYCELSDMQKNMYDDF 1569
Query: 582 LNSEIVLSAFDGSP---------------LAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
S + SA +G+ +L L+K+C+HP L+ K E + +D
Sbjct: 1570 AKSRALASA-EGAVVAAQSAAQKVEKQHIFQSLQYLRKLCNHPALVLKADQEAIAANLDR 1628
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNIS-CKISFILSLLD----KLIPEG---- 677
+ ++ A + D+ ++ C I S + +LI G
Sbjct: 1629 L-----GLKVDRPADGLKDIQHAPKLLALKQLLTDCGIGVTASAAESGKSELIDAGPESA 1683
Query: 678 -----HNVLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVA 729
H VLIF Q ++ML++I+ + + ++R+DG T AS R IV F
Sbjct: 1684 GAFSQHRVLIFCQMKQMLDIIESDLFKQHMPSVTYMRLDGGTDASKRHAIVQTFNSDPSI 1743
Query: 730 PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGT 789
LLT+ VGGLGLTLT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+T GT
Sbjct: 1744 DCLLLTTHVGGLGLTLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITKGT 1803
Query: 790 VEEKIYRKQIFK 801
+EEKI Q FK
Sbjct: 1804 LEEKIMGLQRFK 1815
>gi|429334849|ref|ZP_19215500.1| Snf2/Rad54 family helicase [Pseudomonas putida CSV86]
gi|428760519|gb|EKX82782.1| Snf2/Rad54 family helicase [Pseudomonas putida CSV86]
Length = 1093
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 289/596 (48%), Gaps = 72/596 (12%)
Query: 244 GKLVVNRPDRRDGKLNKSAHSGLVNVLDD----YSDDSVLEDEGSITLSGPRSTYMLPGK 299
G+L + D R +L+ + L N LDD + L D S + + P
Sbjct: 559 GELYLTENDGRSLRLSAPDAARLSN-LDDISLTWQGGERLRDFASRLKNAQYTEVQAPQG 617
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKRALVV 358
+ L P+Q EGL WL +L GG+LGDDMGLGKT+Q + LA RL AL +
Sbjct: 618 LNATLRPYQLEGLSWLQTLRDLEVGGLLGDDMGLGKTLQTLSHVLAEKNAGRLKSPALAI 677
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P +L+ +W+ E K+ G + R + L+D ++L+TY ++ +
Sbjct: 678 MPTSLIPNWLDEAERFTPQLKVVALHGAG-RNRHFA---DLRDYDLVLSTYALL---PRD 730
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNL 478
L + I W +ILDE IKN +++ A++ E+ + R+ ++GTP++NNL
Sbjct: 731 LEHFTPID---------WHLLILDEAQNIKNATSKAAQAARELKADQRLCLTGTPMENNL 781
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
ELW++F+F P LGD+K F Y PI EK S L RI+P+
Sbjct: 782 GELWSIFHFLMPGWLGDSKTFARDYRTPI-----------EKYGDSERMSHLAARIRPFL 830
Query: 539 LRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAA 598
LRR K +V E L K+E+I W+ L+ QR YE V A D A
Sbjct: 831 LRRTKEQVATE--------LPAKSEIIHWVDLSDAQRDTYET------VRVAMDSKVRAE 876
Query: 599 LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDN 658
+T AA + ++++L +L + + D
Sbjct: 877 IT------------RNGAARSQIVILEALLKLRQVCCDLRLVANATVKGSQSD------- 917
Query: 659 ISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVK 718
K+ ++ +LD L+ EG +L+FSQ ML LI++ + + ++ + G TK DR
Sbjct: 918 -KGKLGSLMDMLDDLLSEGRKILLFSQFTSMLALIEQELEKRKIRYSLLTGDTK--DRRT 974
Query: 719 IVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKD 778
V +FQ GD P+FL++ + GG GL LT AD VI DP WNP+T+NQ+ DRAYRIGQ K
Sbjct: 975 PVREFQNGDT-PLFLISLKAGGTGLNLTAADTVIHYDPWWNPATENQATDRAYRIGQDKP 1033
Query: 779 VVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRY-FSQQDLRELLS-LPKQ 832
V VY+L+T GTVEEKI + Q K L E ++ + D+ L S LP+Q
Sbjct: 1034 VFVYKLITRGTVEEKIQQLQKEKAALAAGLLEGNAAGQWKLAADDIEALFSPLPEQ 1089
>gi|46127169|ref|XP_388138.1| hypothetical protein FG07962.1 [Gibberella zeae PH-1]
Length = 856
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 288/568 (50%), Gaps = 68/568 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ ++ +L PHQ EG+++++ C + G I+ D+MGLGKT+Q
Sbjct: 253 PRVPVVIDPRLAKILRPHQVEGVKFMY--QCVTGLIDEKANGCIMADEMGLGKTLQCISL 310
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
+ L I++A+VV P +L+ +W ELT L A F K + EL
Sbjct: 311 MWTLLKQSPDAGKSTIQKAIVVCPASLVKNWANELTK-WLGANAINPFAIDGKASKEELT 369
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N + L+ + + DEGH
Sbjct: 370 RQLRQWANATGRSVTRPVIIVSYETLRLNVEELKNTKI------------GLLFCDEGHR 417
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN + +L + + R+I++GTPIQN+L E ++L +F P+LLG F+++YE+P
Sbjct: 418 LKNSDSNTFNALNSLNVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIP 477
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A + +++ G L + + +RR N++ S L K E +V
Sbjct: 478 ILRGRDADASEADRKKGDECTAALLGVVNKFLIRR-TNDIL-------SKYLPVKYEHVV 529
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G
Sbjct: 530 FCNLAPFQFDLYNYFIKSPEIQALLRGKGSQPLKAINILKKLCNHPDLLN---MSDDLPG 586
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLI 682
+ P+D ++ A D +E S K++ + +L ++ + ++ +++
Sbjct: 587 SEKCY-PDD---------YVPKEARGRD-REVKSWYSGKMAVLDRMLARIRQDTNDKIVL 635
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQVGG 740
S L+L ++ S+ Y LR+DGT + R K+V+ F EGD IFLL+S+ GG
Sbjct: 636 ISNYTSTLDLFEKLCRSRQYGSLRLDGTMNVNKRQKLVDRFNDPEGDEF-IFLLSSKAGG 694
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 695 CGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSH 754
Query: 801 KGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 755 KQSLSSCVVDSAEDVERHFSLDSLRELF 782
>gi|302307807|ref|NP_984563.2| AEL297Wp [Ashbya gossypii ATCC 10895]
gi|299789178|gb|AAS52387.2| AEL297Wp [Ashbya gossypii ATCC 10895]
Length = 895
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 273/529 (51%), Gaps = 52/529 (9%)
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKE-------- 370
G I+ D+MGLGKT+Q + L I++ ++V P +L+++W E
Sbjct: 325 GCIMADEMGLGKTLQCIALMWTLLRQGSQGRPTIEKCIIVCPSSLVNNWANEIVKWLGPD 384
Query: 371 -LTAVGLSAKIREYFGTCV--KTRQYEL-QYVLQDKGVLLTTYDIVRNNSKSLRGSSFIS 426
L+ + + + V RQ+ + Q K VL+ +Y+ +R N ++L+G
Sbjct: 385 ALSPLAIDGRKSSLSNGSVAQSVRQWAIAQGRNVVKPVLIISYETLRRNVENLKGCKV-- 442
Query: 427 DEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFN 486
M+ DEGH +KN + SL I R+I+SGTPIQN+L E +AL N
Sbjct: 443 ----------GLMLADEGHRLKNGDSLTFTSLDSINCPRRVILSGTPIQNDLSEYFALLN 492
Query: 487 FCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEV 546
F P LLG F++ +E+PILRG D A D+E G EL + + + +RR N++
Sbjct: 493 FSNPGLLGTRAQFRKNFEIPILRGRDADATDKEIAAGEVKLHELSQIVSKFIIRR-TNDI 551
Query: 547 FHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS---PLAALTILK 603
S L K E I+++ L+ Q+ +YE F+ S V G+ PL A+ +LK
Sbjct: 552 L-------SKYLPCKYEHILFVNLSPMQKAIYEHFVRSREVAKLMKGTGSQPLKAIGLLK 604
Query: 604 KICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKI 663
K+C+HP LL D + G +++ P+D A + + + Q H S K
Sbjct: 605 KLCNHPDLLD---LPDEIAGSTNLI-PDDYQSA--MTHNSRGGRSHVEVQTTH---SSKF 655
Query: 664 SFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVND 722
+ + L K+ E ++ +++ S + L+LI++ Y LR+DGT + R K+V+
Sbjct: 656 AILERFLFKIKHESNDKIVLISNYTQTLDLIEKMCRYNHYGVLRLDGTMTINKRQKLVDK 715
Query: 723 FQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 781
F + IFLL+S+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKKD +
Sbjct: 716 FNDPSGEEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFI 775
Query: 782 YRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
YR +T G++EEKIY++Q K L + KE + R FS +LR+L
Sbjct: 776 YRFITTGSIEEKIYQRQSMKMSLSSCVVDEKEDVERLFSSDNLRQLFQF 824
>gi|440638315|gb|ELR08234.1| DNA repair and recombination protein RAD54 and RAD54-like protein
[Geomyces destructans 20631-21]
Length = 810
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 285/571 (49%), Gaps = 74/571 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++++ + + G I+ D+MGLGKT+Q +
Sbjct: 207 PKVPVVIDPRLAKVLRPHQIEGVKFMYKCVTGMIDDRANGCIMADEMGLGKTLQCITLMW 266
Query: 345 GLFHSRL------IKRALVVAPKTLLSHWIKELTA-VGLSAKIREYFGTCVKTRQYELQY 397
L I++ ++ P +L+ +W EL +G A + F K + EL
Sbjct: 267 TLLKQSTDAGKPTIQKVIIACPSSLVQNWANELVKWLGKGAIVP--FAIDGKASKEELTQ 324
Query: 398 VLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLI 447
L+ + V++ +Y+ +R N L+ + M+ DEGH +
Sbjct: 325 QLRQWAIASGRAVTRPVIIVSYETLRLNVDELKNTQI------------GLMLCDEGHRL 372
Query: 448 KNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPI 507
KN +Q +L + + R+I+SGTPIQN+L E ++L +F P+LLG F++KYELPI
Sbjct: 373 KNGDSQTFTALNNLNVSRRVILSGTPIQNDLSEYFSLVSFANPDLLGTRLEFRKKYELPI 432
Query: 508 LRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVW 567
L+G D D+++ G +EL + + +RR N++ S L K E +V+
Sbjct: 433 LKGRDAAGTDKDRERGDDCLRELLGVVNKFIIRR-TNDIL-------SKYLPVKYEHVVF 484
Query: 568 LRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGM 624
L Q LY F+ S + + G PL A+ +LKK+C+HP LL D L G
Sbjct: 485 CGLAPFQLDLYNYFITSPEIKALLRGKGSQPLKAIGMLKKLCNHPDLLN---LSDDLPGC 541
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHN 679
+ PED D + + ++ S + +LD+++
Sbjct: 542 EQYF-PEDYV--------------PKDARGRDRDVKPWYSGKMQVLDRMLARIRQDTNDK 586
Query: 680 VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQ 737
+++ S + L++ + S+GY LR+DGT S R K+V+ F + D P +FLL+S+
Sbjct: 587 IVLISNYTQTLDIFDKLCRSRGYGSLRLDGTMNVSKRQKLVDKFNDPD-GPEFVFLLSSK 645
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++
Sbjct: 646 AGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQR 705
Query: 798 QIFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
Q K L + E + R+F+ LREL
Sbjct: 706 QSHKQSLSSCVVDSAEDVERHFTLDSLRELF 736
>gi|350408475|ref|XP_003488415.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Bombus
impatiens]
Length = 820
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 279/543 (51%), Gaps = 60/543 (11%)
Query: 302 NMLFPHQREGLRWLWSLHCQGK-----GGILGDDMGLGKTMQICGFL-----AGLFHSRL 351
N+L PHQR G+ +L+ K G IL D+MGLGKT+Q + G + +
Sbjct: 229 NVLRPHQRHGIVFLYECIMGLKVSNHFGAILADEMGLGKTLQCITIIWTLLKKGPYGYPI 288
Query: 352 IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDI 411
+K L+V P L ++W KE +I Y K + + + +++ V++ +YD+
Sbjct: 289 LKYILIVTPSCLCNNWNKEFKQWLGFHRISPYVVN-AKNKAKDFKKHIRN-SVMIISYDL 346
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
+ + ++ F + +I DEGH +KN + AK L + +I+++G
Sbjct: 347 LTRCEQEVKEIPF------------NLIICDEGHRLKNNDIKAAKILYNLKCKRKILLTG 394
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
TPIQNNL+E + L +F P +LG N FK YE PI+ A D +G+ A ELR
Sbjct: 395 TPIQNNLQEFFTLIDFVNPTILGSNSEFKNYYEKPIVASQCPTAPDHVVSLGTERANELR 454
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
E+ + + LRR + T + L K+E+IV+ RL+ Q+ LY +S S
Sbjct: 455 EKTKCFILRRTQE--------TINKYLPSKHELIVFCRLSIEQQDLYSQVTDSWFNKSLS 506
Query: 592 DGS--PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEK 649
D + L +T LKKIC+HP L E L +DS +
Sbjct: 507 DNNIPHLTVITALKKICNHPELFYNEKTE--LFCIDS---------------------KT 543
Query: 650 DDFQEQHDNISC-KISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRID 708
+ ++ + C KIS + +LL L +++ S + L++++ +G +FLR+D
Sbjct: 544 SNIKDSTKTVYCGKISIVQTLLRNLKKTEEKLVLVSYYTQTLDILETVCNKEGLQFLRLD 603
Query: 709 GTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSV 767
G+T ++ R KI+ F D + +FLL+++ GG+GL L A R+I+ D WNP++D+Q++
Sbjct: 604 GSTTSNTRSKIIERFNSTSDKSKVFLLSAKAGGVGLNLPGASRLILFDSDWNPASDSQAM 663
Query: 768 DRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRY-FSQQDLREL 826
R +R GQKKDV + RL+T GT+EEKI+++QI K L +T + + S +L++L
Sbjct: 664 ARIWRDGQKKDVYILRLLTTGTIEEKIFQRQISKASLNETVVDLNPSSSFKLSINELKDL 723
Query: 827 LSL 829
+L
Sbjct: 724 FTL 726
>gi|296411575|ref|XP_002835506.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629290|emb|CAZ79663.1| unnamed protein product [Tuber melanosporum]
Length = 812
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 179/565 (31%), Positives = 289/565 (51%), Gaps = 62/565 (10%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSL-----HCQGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++++ G I+ D+MGLGKT+Q +
Sbjct: 209 PKVPVVIDPRLSKVLRPHQVEGIKFMYRCVTGMTDAAASGCIMADEMGLGKTLQCIALMW 268
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++ +VV P +L+ +W EL L F K + EL+
Sbjct: 269 TLLKQSPEPGKPTIQKCVVVCPSSLVGNWASELVK-WLGKDAINPFAIDGKVSKAELKAQ 327
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + VL+ +Y+ +R L S S G ++ DEGH +K
Sbjct: 328 LKQWAISSGRSVVRPVLIVSYESLR-----LHTSDLASIPIG-------LLLADEGHRLK 375
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N Q K+L+ + R+I+SGTPIQN+L E +AL NF P LG + F+++YELPIL
Sbjct: 376 NRDNQTYKALMTLNVDRRVILSGTPIQNDLSEYFALLNFANPNFLGTHNEFRKQYELPIL 435
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D + +++ G EL + + + +RR N++ S L K E +V+
Sbjct: 436 RGRDADGSEDDRKKGDERLAELLQLVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 487
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
+L+ Q LY F+ S + S G PL A+ +LKK+C+HP LL +ED L G +
Sbjct: 488 KLSPFQTDLYNYFITSPDIKSILRGKGSQPLKAIGLLKKLCNHPDLLN--LSED-LPGCE 544
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
S L P+D ++ A D +E S K+ + +L ++ E + +++ S
Sbjct: 545 S-LYPDD---------YVPKDARGRD-REVKVWYSGKMMVLDRMLARIQRETKDKIVLIS 593
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGL 743
+ L++ ++ S+GY LR+DGT S R K+V F + D +FLL+S+ GG G+
Sbjct: 594 NYTQTLDVFEKLCRSRGYGALRLDGTMNGSKRTKLVAKFNDPDSEEFVFLLSSKAGGCGI 653
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K
Sbjct: 654 NLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQS 713
Query: 804 LFKTATEHKEQI-RYFSQQDLRELL 827
L + + E + R+F L++L
Sbjct: 714 LSTSVVDGVEDVERHFGLDGLKQLF 738
>gi|389794247|ref|ZP_10197405.1| DNA/RNA helicase [Rhodanobacter fulvus Jip2]
gi|388432772|gb|EIL89761.1| DNA/RNA helicase [Rhodanobacter fulvus Jip2]
Length = 1011
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 273/552 (49%), Gaps = 90/552 (16%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGL-FHS 349
R++ ++P + L P+QREGLRWL +L G GG+L DDMGLGKT+Q+ L L H
Sbjct: 533 RASDVVPEGLTVELRPYQREGLRWLNALAEAGVGGVLADDMGLGKTLQLITHLLSLKQHG 592
Query: 350 RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
L + ALVV P +L+ +W E+ ++ G R E L D+ ++LT+Y
Sbjct: 593 ALTQPALVVVPTSLIPNWQSEIARFAPMLRVLTLHG---PQRAEEFTQ-LGDQDIVLTSY 648
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
++ + +LR +F ++LDE +KNP TQ ++LL + + + +
Sbjct: 649 ALLPRDVVALRKQAFA------------LIVLDEAQQVKNPRTQARRALLSLRAPRFVCL 696
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
+GTP++N+L ELW+ + P LLGD F+ Y +PI + D+ R
Sbjct: 697 TGTPLENHLGELWSQIDLAVPGLLGDEGAFRRHYRVPIEKQRDEECQQR----------- 745
Query: 530 LRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF---LNSEI 586
L R+ P+ LRR K +V E L K E+ + + QR LYE L E+
Sbjct: 746 LNLRLAPFILRRTKAQVATE--------LPPKTEITRRVVMEGRQRDLYEGLRLALTEEL 797
Query: 587 --VLS----AFDG-SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKL 639
V++ A G L AL L+++C P L+ AA+ V
Sbjct: 798 REVIAQRGIAHSGIVVLDALLKLRQVCCDPRLVKLEAAQGV------------------- 838
Query: 640 AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGS 699
H+ S K ++ +L LI EG VL+FSQ ML LI +
Sbjct: 839 ----------------HE--SAKFELLMDMLPALIDEGRKVLLFSQFTGMLKLIAAELDR 880
Query: 700 KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
+ ++ + G T+ DR + V FQ G+V P+FLL+ + GG+GL LT AD VI DP WN
Sbjct: 881 RHIPYVTLTGDTR--DRAEPVQRFQNGEV-PLFLLSLKAGGVGLNLTAADTVIHYDPWWN 937
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE---HKEQIR 816
P+ + Q+ DRA+RIGQ K V V+RL+T GTVEE+I + K L E +E++
Sbjct: 938 PAAEAQASDRAHRIGQDKPVFVFRLITSGTVEERIEELKARKAELADAVLEGGGTREKL- 996
Query: 817 YFSQQDLRELLS 828
F Q DL LL+
Sbjct: 997 SFDQLDLDTLLA 1008
>gi|290983303|ref|XP_002674368.1| helicase-like protein [Naegleria gruberi]
gi|284087958|gb|EFC41624.1| helicase-like protein [Naegleria gruberi]
Length = 745
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 174/600 (29%), Positives = 299/600 (49%), Gaps = 78/600 (13%)
Query: 250 RPDRRDGKLNKSAHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQR 309
R R+ ++SA L +V +S L+ L + Y+ G L +Q
Sbjct: 152 RKGRKATTTDESAQKKLKSV---FSKSKTLQTANQAALKYSQPKYL----SGTTLRDYQL 204
Query: 310 EGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIK 369
+G+ WL SL+ G GIL D+MGLGKT+Q G L+ + LVVAP + +S+W+
Sbjct: 205 KGVNWLISLYENGVNGILADEMGLGKTIQTIGLFCHLYEKGIKGPFLVVAPLSTVSNWVN 264
Query: 370 ELTAVGLSAKIREYFG-----TCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSF 424
E+ Y G ++ + + + V++++Y+IV +R F
Sbjct: 265 EIDKWAPDIGCVLYHGNKDDRAIIRAKNFS-KVKKGQIAVVVSSYEIV------MRDKKF 317
Query: 425 ISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWAL 484
++++ W Y+++DE H +KN + + + L S +R++++GTP+QNNL ELW+L
Sbjct: 318 LANKFN-----WKYIVVDEAHRLKNFNCRLTRELKTYSSENRLLLTGTPLQNNLSELWSL 372
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
NF P + D F + ++ ND + EK + + +L ++P+ LRRLK+
Sbjct: 373 LNFLLPSIFDDLSAFNKWFDFTKKEKND--YITNEK---TQLISKLHNILRPFLLRRLKS 427
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTIL-- 602
+V + KK E +++ +T Q++ Y A + S+ +L F A T L
Sbjct: 428 DV--------DIGIPKKREFLIYTHMTDMQKEYYNA-VKSKDLLPIFKDQKRANSTTLLN 478
Query: 603 -----KKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHD 657
+KIC+HP LL + +D +E ++ A F ++
Sbjct: 479 LLMQMRKICNHPFLLREFETKD----------------SE------SESASNKRFLKECT 516
Query: 658 NISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKG-YKFLRIDGTTKASDR 716
S K ++ +L+ L GH VLIFS + L+++++ + +G K+ RIDG+ ++R
Sbjct: 517 QNSGKFGLLVKMLENLKKNGHKVLIFSLMTRFLDVLEDYLECRGDMKYCRIDGSIAQTER 576
Query: 717 VKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQK 776
+ + +F + + FLL+++ GGLG+ LT AD VI+ D WNP D Q+ DR +RIGQK
Sbjct: 577 EQKIKEFNQDEDVFCFLLSTRAGGLGINLTAADTVIIYDSDWNPQIDLQAQDRCHRIGQK 636
Query: 777 KDVVVYRLMTCGTVEEKIYR---------KQIFKGGLFKTATEHKEQIRYFSQQDLRELL 827
+ V ++RL+T GTVE+K+ + + I G FK T+ + ++ + Q+L E+L
Sbjct: 637 RSVRIFRLLTLGTVEKKVLQTATKKLKLERLIIHKGNFKGNTQQQSKMT-ITAQNLMEIL 695
>gi|367050780|ref|XP_003655769.1| SNF21-like protein [Thielavia terrestris NRRL 8126]
gi|347003033|gb|AEO69433.1| SNF21-like protein [Thielavia terrestris NRRL 8126]
Length = 1449
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 272/520 (52%), Gaps = 73/520 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 546 VGGTLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLITYLIEKKHQNGPYLVI 605
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
P + L++W E S Y G R+ + + + Q K VLLTTY+ +
Sbjct: 606 VPLSTLTNWNLEFDKWAPSVAKVVYKGPP-NARKMQQEKIRQGKFQVLLTTYEYI----- 659
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH-RIIISGTPIQN 476
I D W +MI+DEGH +KN +++ + ++ + S R+I++GTP+QN
Sbjct: 660 -------IKDRPLLSKIKWFHMIIDEGHRMKNTNSKLSATIQQYYSTRFRLILTGTPLQN 712
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERI 534
NL ELWA+ NF P + K F E + P G DK L E++I V + L + +
Sbjct: 713 NLAELWAMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVL 770
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDG 593
+P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + + +I +S G
Sbjct: 771 RPFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQARLYKQMVTHQKIAVSDGKG 822
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
A + L+K+C+HP V D +++ +NP + +
Sbjct: 823 GKTGARGLSNMIMQLRKLCNHPF---------VFDEVENQMNPANVS------------- 860
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++++++ + +G +
Sbjct: 861 ---------NDLLWRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDFLRYRGIQ 911
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+LR+DGTTK+ DR ++ +F D +P +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 912 YLRLDGTTKSEDRSDLLKEFNRSD-SPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPH 970
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 971 QDLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARFK 1010
>gi|358379094|gb|EHK16775.1| hypothetical protein TRIVIDRAFT_214554 [Trichoderma virens Gv29-8]
Length = 1432
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 275/519 (52%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 551 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEQKQQSGPYLVI 610
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
P + L++W E S Y G TR+ + + + Q + VLLTTY+ +
Sbjct: 611 VPLSTLTNWNLEFEKWAPSVARVVYKGPP-NTRKLQQEKIRQGRFQVLLTTYEYI----- 664
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH-RIIISGTPIQN 476
I D W +MI+DEGH +KN ++ + ++ + + R+I++GTP+QN
Sbjct: 665 -------IKDRPILSKIKWFHMIIDEGHRMKNTQSKLSATIQQYYTTRFRLILTGTPLQN 717
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERI 534
NL ELWA+ NF P + K F E + P G DK L E++I V + L + +
Sbjct: 718 NLSELWAMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVL 775
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDG 593
+P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + ++++V+S G
Sbjct: 776 RPFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQSKLYKQMVTHNKLVVSDGKG 827
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
A + L+K+C+HP V D +++++NP ++I+
Sbjct: 828 GKTGARGLSNMIMQLRKLCNHPF---------VFDVVENVMNP----------LNIS--- 865
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++++++ + + YK
Sbjct: 866 ---------NDLLWRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDYLRYRSYK 916
Query: 704 FLRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+LR+DGTTK+ +R ++ DF G +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 917 YLRLDGTTKSDERSDLLRDFNAPGSEYFLFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 976
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 977 DLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFK 1015
>gi|308475524|ref|XP_003099980.1| hypothetical protein CRE_20884 [Caenorhabditis remanei]
gi|308266032|gb|EFP09985.1| hypothetical protein CRE_20884 [Caenorhabditis remanei]
Length = 1429
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 262/498 (52%), Gaps = 53/498 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKT 362
L P+Q +GL W+ SL+ GIL D+MGLGKT+Q L L + LV+ P +
Sbjct: 487 LKPYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLLTYLMEVKQNNGPYLVIVPLS 546
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGS 422
LS+W E + K Y GT R+ E Q D VL+TTY+ V K L G
Sbjct: 547 TLSNWQSEFAKWAPNVKSVIYKGTKDARRRVEAQIKRVDFNVLMTTYEYV-IKEKGLLGK 605
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKEL 481
W YMI+DEGH +KN ++ +L + HR++++GTP+QN L EL
Sbjct: 606 -----------IRWKYMIIDEGHRLKNSESKLTSNLNTYFKAQHRLLLTGTPLQNKLPEL 654
Query: 482 WALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRR 541
WAL NF P + + F+E + P + +K L++E+ + + + L + ++P+ LRR
Sbjct: 655 WALLNFLLPSIFTSCETFEEWFNAPFITAGEKVELNQEETM--LIIRRLHKVLRPFLLRR 712
Query: 542 LKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAAL-- 599
LK EV E L K E ++ +++ Q+ +Y + ++L A S +L
Sbjct: 713 LKKEVESE--------LPDKTEYVIKCDMSALQKVIYR-HMKKGLLLDAKMSSGARSLSN 763
Query: 600 TI--LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHD 657
TI L+K+C+HP L E + D + + +V+ KD +
Sbjct: 764 TIVHLRKLCNHPFLF-----ETIEDSC-------------RTHWKVNEVSGKDLMR---- 801
Query: 658 NISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRV 717
++ K+ + +L KL GH VL+F Q KM+++ ++ + + + +LR+DG+TK +R
Sbjct: 802 -VAGKLELLDRILPKLKATGHRVLMFFQMTKMMDIFEDYLHFRNHTYLRLDGSTKPDERG 860
Query: 718 KIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQK 776
++++ + D +F+L+++ GGLGL L AD VI+ D WNP D Q+ DRA+RIGQK
Sbjct: 861 ELLSLYNAPDSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQK 920
Query: 777 KDVVVYRLMTCGTVEEKI 794
K+V V RL+T +VEEK+
Sbjct: 921 KEVRVLRLITANSVEEKM 938
>gi|359489057|ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 3
[Vitis vinifera]
Length = 2060
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 270/546 (49%), Gaps = 68/546 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y L ++ L +Q+EG+ WL L GIL DDMGLGKT+Q +A
Sbjct: 1454 YKLSTELKVTLRRYQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVASDIEEHRTS 1513
Query: 354 R------ALVVAPKTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDKGVL 405
+ +L++ P TL+ HW E+ S+ I +Y G+ + LQ + + V+
Sbjct: 1514 KDGAYPPSLIICPSTLVGHWAYEIEKYIDSSVITTLQYVGSA--HDRMSLQGLFEKHNVI 1571
Query: 406 LTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH 465
+T+YD+VR + L +W+Y ILDEGH+IKN ++ ++ ++ + H
Sbjct: 1572 ITSYDVVRKDVDYL------------GQLLWNYCILDEGHIIKNSKSKITSAVKQLKAQH 1619
Query: 466 RIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSA 525
R+I+SGTPIQNN+ +LW+LF+F P LG + F+ Y P+ D ++ G+
Sbjct: 1620 RLILSGTPIQNNILDLWSLFDFLMPGFLGTERQFQATYGKPLQAARDSKCSAKDAEAGAL 1679
Query: 526 VAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEAFL 582
+ L +++ P+ LRR K+EV LS E I+ + L Q +LYE F
Sbjct: 1680 AMEALHKQVMPFLLRRTKDEV-----------LSDLPEKIIQDRYCDLCPVQLKLYEQFS 1728
Query: 583 NSEIV--LSAF-------------DGSPLA------ALTILKKICDHPLLLTKRAAEDVL 621
S + +S+ SP A AL L K+C HPLL+ D L
Sbjct: 1729 GSHVRHEISSIVKRNESTDTGEGNSASPKASSHVFQALQYLLKLCGHPLLVVGEKIPDSL 1788
Query: 622 DGMDSMLNPEDAALAEKL--AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-H 678
+ S P + + +L H + + E+ C I S + + G H
Sbjct: 1789 TTILSEFFPGTSDIMSELHKLHHSPKLIALHEILEE-----CGIGVDASSSEGAVSVGQH 1843
Query: 679 NVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLT 735
VLIF+Q + L++I+ + K +LR+DG+ + R +IV F + LLT
Sbjct: 1844 RVLIFAQHKAFLDIIERDLFHTHMKSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLT 1903
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+ VGGLGL LT AD ++ ++ WNP D+Q++DRA+R+GQ+K V V+RL+ GT+EEK+
Sbjct: 1904 THVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVM 1963
Query: 796 RKQIFK 801
Q FK
Sbjct: 1964 SLQRFK 1969
>gi|365991713|ref|XP_003672685.1| hypothetical protein NDAI_0K02510 [Naumovozyma dairenensis CBS 421]
gi|343771461|emb|CCD27442.1| hypothetical protein NDAI_0K02510 [Naumovozyma dairenensis CBS 421]
Length = 872
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 175/590 (29%), Positives = 290/590 (49%), Gaps = 89/590 (15%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSL-------------------------HCQGKG 324
P ++ K+ +L PHQ EG+++L+ + G
Sbjct: 246 PNVPVVIDPKLTKILRPHQVEGVKFLYRCVTGLVMKDFLDAETVNTGIVAPQQNNRGAYG 305
Query: 325 GILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKEL-------- 371
I+ D+MGLGKT+Q + L RLI + ++V P +L+++W EL
Sbjct: 306 CIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNT 365
Query: 372 -TAVGLSAKIREYFGTCVKTRQYELQYVLQDKG------VLLTTYDIVRNNSKSLRGSSF 424
+ + + K + + T ++ Q KG VL+ +Y+ +R N L+
Sbjct: 366 LSPLAIDGK-KSSLASGSTTVAEAIKSWGQAKGRNIVKPVLIISYETLRRNVDQLQNCDV 424
Query: 425 ISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWAL 484
M+ DEGH +KN + +L I R+I+SGTPIQN+L E +AL
Sbjct: 425 ------------GLMLADEGHRLKNADSLTFTALDSINCPRRVILSGTPIQNDLSEYFAL 472
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
NF P LLG F++ +E+PILR D + D E + G ++L + + + +RR N
Sbjct: 473 LNFSNPGLLGTRSEFRKNFEIPILRSRDADSTDDEIKKGEEQLQKLSDIVSKFIIRR-TN 531
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG----SPLAALT 600
++ S L K E ++++ L Q+ +Y+ + S + G PL A+
Sbjct: 532 DIL-------SKYLPCKYEHVIFVDLKPFQKNVYQNLIKSRDIKKMMKGVGGTQPLKAIG 584
Query: 601 ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNIS 660
+LKK+C+HP LL ++ LD D++ P D ++ + D Q ++ S
Sbjct: 585 VLKKLCNHPSLLN---LDEELDNFDNLEIPSDYNMS----------SNSRDIQPKY---S 628
Query: 661 CKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKI 719
K S + L K+ E + +++ S + L+LI++ +K Y LR+DGT + R K+
Sbjct: 629 GKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRTKHYGSLRLDGTMNINKRQKL 688
Query: 720 VNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKD 778
V+ F + + IFLL+S+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKKD
Sbjct: 689 VDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKD 748
Query: 779 VVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
+YR ++ G++EEKIY++Q K L + KE + R FS +LR+L
Sbjct: 749 CFIYRFISTGSIEEKIYQRQSMKMSLSSCVVDAKEDVERLFSADNLRQLF 798
>gi|339246221|ref|XP_003374744.1| domain protein, SNF2 family [Trichinella spiralis]
gi|316972001|gb|EFV55707.1| domain protein, SNF2 family [Trichinella spiralis]
Length = 1787
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 170/555 (30%), Positives = 280/555 (50%), Gaps = 78/555 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q++G+ WL SL+ GIL D+MGLGKT+Q ++ L + + L++
Sbjct: 791 VGGKLKEYQKKGVEWLVSLYVNNLNGILADEMGLGKTIQTIALISHLIEKKRVNGPYLII 850
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+WI E S Y G+ R Q + LLTTY+ +
Sbjct: 851 VPLSTLSNWILEFEKWAPSVVKIVYKGSPNVRRALSFQTRQEKFNCLLTTYEYI------ 904
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D+A W YMI+DEGH +KN + + L S HR++++GTP+QN
Sbjct: 905 ------IKDKAILSKIRWKYMIIDEGHRMKNHHCKLTQVLNTYYTSPHRLLLTGTPLQNK 958
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P +K L++E+ + + + L + ++P+
Sbjct: 959 LPELWALLNFLLPSIFKCCNTFEQWFNAPFATTGEKVELNQEETM--LIIRRLHKVLRPF 1016
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLS-----AFD 592
LRRLK EV + L +K E ++ +++ Q+ LY+ ++++
Sbjct: 1017 LLRRLKKEV--------ESQLPEKVEYVIKCDMSALQKVLYQHMQAKGVMVTRETDKTKK 1068
Query: 593 GSPLAALTIL-------KKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
G+P A + L +K+C+HP + E + + A+AE
Sbjct: 1069 GTPAAGVRTLMNTVMQLRKLCNHPYMF-----EHI-----------EEAMAEHFGYPDKI 1112
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
V+ + ++ S K + +L KL GH VL+F Q ++ ++++ + +K+L
Sbjct: 1113 VSGPELYR-----ASGKFELLDRVLPKLKASGHRVLLFCQMTCLMTIMEDYFHYRDFKYL 1167
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
R+DGTTK+ DR +++ F AP IFLL+++ GGLGL L AD VI+ D WNP
Sbjct: 1168 RLDGTTKSEDRGELLAKFN----APASDYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNP 1223
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLF---KTA 808
D Q+ DRA+RIGQ ++V V RLMT +VEE+I Y+ +++ + GLF TA
Sbjct: 1224 HQDIQAQDRAHRIGQLREVRVLRLMTVNSVEERILAAARYKLNVDEKVIQAGLFDQKSTA 1283
Query: 809 TEHKEQIRYFSQQDL 823
+E ++ ++ Q ++
Sbjct: 1284 SERRQFLQAILQNEI 1298
>gi|396499206|ref|XP_003845417.1| hypothetical protein LEMA_P007250.1 [Leptosphaeria maculans JN3]
gi|312221998|emb|CBY01938.1| hypothetical protein LEMA_P007250.1 [Leptosphaeria maculans JN3]
Length = 1469
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 178/565 (31%), Positives = 287/565 (50%), Gaps = 62/565 (10%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++L+ + + G I+ D+MGLGKT+Q +
Sbjct: 202 PRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCIALMW 261
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++ ++ P +L+ +W EL I + +++ +Q +
Sbjct: 262 TLLKQSPDAGKPTIQKCVIACPSSLVRNWANELVKWLGKDAITPFAIDGKASKEELIQQI 321
Query: 399 LQ---------DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
Q + VL+ +Y+ +R DE G ++ DEGH +KN
Sbjct: 322 RQWSIASGRAVVRPVLIVSYETLR----------LYVDEFGQTPI--GLLLCDEGHRLKN 369
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
+ +L + R+I+SGTPIQN+L E +AL NF P LG F+++YE+PILR
Sbjct: 370 GESLTFTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKQYEIPILR 429
Query: 510 GNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR 569
G D + D + + G+ EL + + +RR N++ S L K E +V+
Sbjct: 430 GRDANGTDEDVKKGNERLTELLGLVNKFIIRR-TNDIL-------SKYLPVKYEHVVFCN 481
Query: 570 LTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
L Q+ LY F+ S V S G PL + +LKK+C+HP LL ED L G +
Sbjct: 482 LAPFQKDLYNHFIKSPDVQSLLRGKGSQPLKVIGMLKKLCNHPDLLN--LPED-LPGCED 538
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQ 685
+L P+D +K D +D +E S K++ + +L ++ E ++ +++ S
Sbjct: 539 VL-PDD--FVQK------DARGRD--REVKVWYSGKMAVLDRMLARIRAETNDKIVLISN 587
Query: 686 TRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGL 743
+ L+L S+GY LR+DGT S R K+V+ F + + P +FLL+S+ GG GL
Sbjct: 588 YTQTLDLFAALCRSRGYGALRLDGTMNVSKRQKLVDKFNDPE-GPEFVFLLSSKAGGCGL 646
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR +T GT+EEK++++Q K
Sbjct: 647 NLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQS 706
Query: 804 LFKTATEHKEQI-RYFSQQDLRELL 827
L + E + R+FS LREL
Sbjct: 707 LSSCVVDSAEDVERHFSLDSLRELF 731
>gi|326431158|gb|EGD76728.1| SNF2 family DNA-dependent ATPase [Salpingoeca sp. ATCC 50818]
Length = 1797
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 265/528 (50%), Gaps = 63/528 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-I 352
YML +G L P+Q GL WL SL+ GIL D+MGLGKT+Q L L +
Sbjct: 776 YML---VGGTLKPYQMVGLEWLVSLYNNRLNGILADEMGLGKTIQTIALLTYLAEKKNNF 832
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIV 412
L++ P LS+W E + Y GT + R Y + + VL+TTY+++
Sbjct: 833 GPFLIIVPLATLSNWTLEFEKWAPTFDTITYKGTKHERRAYAHRILEGRFNVLVTTYEMI 892
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISG 471
LR S +S W Y+++DEGH +KN + +++L+E S R++++G
Sbjct: 893 ------LRERSVLSK------VQWQYLVVDEGHRMKNAQNKLSRTLVEYFTSTRRLLLTG 940
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
TP+QNNL ELWAL NF P++ ++ F + P + LD E++ + +L
Sbjct: 941 TPLQNNLPELWALLNFLLPDVFNSSETFDSWFNAPFAGTGENMQLDAEEK--HLIILQLH 998
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN-------- 583
+ ++P+ LRRLK EV L K E ++ +++ QR++Y A L
Sbjct: 999 KILRPFLLRRLKKEV--------ETQLPDKVEYVLRCDMSALQRKVY-ALLQKYGVTLPV 1049
Query: 584 ----SEIVLSAFDGSPLAAL----TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAAL 635
++ V + D S + L L+K+C HP L + L+ + + + AAL
Sbjct: 1050 EPDETKKVFALQDASSVNKLRNMIMQLRKLCCHPFLF-EEVERAYLEHAAAEMGMDKAAL 1108
Query: 636 AEKLAMHIADVAEKDDFQEQHDNISC-KISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQ 694
+ A C K + +L KL H LIFSQ +L +++
Sbjct: 1109 TNGPELWRA----------------CGKFELLDRMLPKLRAGRHRTLIFSQFTSLLTVLE 1152
Query: 695 ESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVA-PIFLLTSQVGGLGLTLTKADRVIV 753
+ +KG K+LR+DG+T A DR +++ F D IF+L+++ GGLGL L AD VI+
Sbjct: 1153 DYFAAKGIKYLRMDGSTSADDRAELLRLFNAPDSEYEIFILSTRAGGLGLNLQTADTVII 1212
Query: 754 VDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D WNP D Q+ DRA+RIGQ ++V V+RL+T +VEE+I + +K
Sbjct: 1213 YDSDWNPHQDLQAQDRAHRIGQTREVRVFRLVTVNSVEERILERAKYK 1260
>gi|405120985|gb|AFR95755.1| helicase [Cryptococcus neoformans var. grubii H99]
Length = 1865
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 268/552 (48%), Gaps = 78/552 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGD-----------------DMGLGKT 336
Y +P +I L +Q++G+ WL L GIL D DMGLGK+
Sbjct: 1272 YQIPVEIKAELRQYQKDGVSWLAFLAKYQLHGILCDGEFPNIKILTEANESCSDMGLGKS 1331
Query: 337 MQICGFLAGLFHSRLIKR------------ALVVAPKTLLSHWIKELTAVGLSAKIREYF 384
+Q +A H R + +L+V P TL HW E+ +Y
Sbjct: 1332 LQSICIIASKHHERAERHKATQSIDSAHLPSLIVCPPTLTGHWYHEILKFTPHLHPVQYV 1391
Query: 385 GTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEG 444
G+ + + L+ L V++++Y+ +R++ L SF+ Y +LDEG
Sbjct: 1392 GSTFE--RTTLRRSLSSYDVVISSYESIRSDISELSKFSFL------------YCVLDEG 1437
Query: 445 HLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYE 504
H+IKN T+ A ++ +I + HR+++SGTPIQNN+ ELW+LF+F P LG+ + F EK+
Sbjct: 1438 HIIKNTKTKLAVAVKQIKAQHRLLLSGTPIQNNVLELWSLFDFLMPGFLGNERTFNEKFS 1497
Query: 505 LPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEM 564
PIL + A +E+ + + L +++ P+ LRRLK +V ++ L K
Sbjct: 1498 KPILADREGKATPKEREAAANALEALHKQVLPFLLRRLKEDVLND--------LPPKIIQ 1549
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLSA----------FDGSPLAALTILKKICDHPLLLTK 614
+ L+ Q+QLY+ F S+ A G +L L+K+C+HP L
Sbjct: 1550 DYYCELSPVQQQLYDEFSRSKAAEEAGMEIESSTKEGQGHVFQSLQYLRKLCNHPAL--- 1606
Query: 615 RAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLI 674
VLDG + A+H A K + Q C I DKL
Sbjct: 1607 -----VLDGEPQRFKEIQKKIGGGPALHDLSHAPKMEALRQLLQ-DCGIGLP---PDKLA 1657
Query: 675 PE--GHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVA 729
+ H VLIF Q R ML++I++ + ++R+DG+T R IV F
Sbjct: 1658 DDVTTHRVLIFCQLRPMLDIIEKDLFGTHMPTVSYMRLDGSTDPRKRHAIVQTFNADPRI 1717
Query: 730 PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGT 789
+ LLT+ VGGLGL LT AD VI VD WNP D Q++DRA+R+GQ+K V VYRL+T GT
Sbjct: 1718 DVLLLTTSVGGLGLNLTGADTVIFVDHDWNPMKDLQAMDRAHRLGQRKVVNVYRLITRGT 1777
Query: 790 VEEKIYRKQIFK 801
+EEKI Q FK
Sbjct: 1778 LEEKIMGLQRFK 1789
>gi|346976842|gb|EGY20294.1| DNA repair and recombination protein RAD54 [Verticillium dahliae
VdLs.17]
Length = 822
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 282/569 (49%), Gaps = 69/569 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++++ + G I+ D+MGLGKT+Q L
Sbjct: 256 PKVPVVIDPRLCKVLRPHQIEGVKFMYKCVTGMIDERANGCIMADEMGLGKTLQCITLLW 315
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A+VV P +L+ +W EL L A F K + EL
Sbjct: 316 TLLKQSPEAGKSAIQKAIVVCPSSLVKNWANELVK-WLGADAVTPFAIDGKASKEELTRQ 374
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + V++ +Y+ +R N L+ + M+ DEGH +K
Sbjct: 375 LRQWAIASGRAVTRPVIIVSYETLRLNVDELKHTKI------------GLMLCDEGHRLK 422
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q SL + + RII+SGTPIQN+L E ++L +F P+LLG F++++ELPIL
Sbjct: 423 NGDSQTFSSLNSLNVSRRIILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPIL 482
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A + +++ G EL + + +RR N++ S L K E +V+
Sbjct: 483 RGRDADADETDRKKGDECLSELLGIVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 534
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY FL S + + G PL A+ ILKK+C+HP LL D L G +
Sbjct: 535 NLAPFQLDLYNYFLTSPDIQALLRGKGSQPLKAINILKKLCNHPDLLN---LNDDLPGSE 591
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
+ P+ D KD ++ + S + +LD+++ +
Sbjct: 592 NCW-PD-------------DYVPKDARGHRNREVKPWYSGKMQVLDRMLARIRQDTNDKI 637
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
++ S + L++ + S+ Y LR+DGT + R K+V+ F + +FLL+S+ G
Sbjct: 638 VLISNYTQTLDIFERLCRSRAYGCLRLDGTMNVNKRQKLVDKFNDPTGEEFVFLLSSKAG 697
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 698 GCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQS 757
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 758 HKQSLSSCVVDSAEDVERHFSLDGLRELF 786
>gi|225436245|ref|XP_002275285.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 1
[Vitis vinifera]
Length = 2052
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 270/546 (49%), Gaps = 68/546 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y L ++ L +Q+EG+ WL L GIL DDMGLGKT+Q +A
Sbjct: 1446 YKLSTELKVTLRRYQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVASDIEEHRTS 1505
Query: 354 R------ALVVAPKTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDKGVL 405
+ +L++ P TL+ HW E+ S+ I +Y G+ + LQ + + V+
Sbjct: 1506 KDGAYPPSLIICPSTLVGHWAYEIEKYIDSSVITTLQYVGS--AHDRMSLQGLFEKHNVI 1563
Query: 406 LTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH 465
+T+YD+VR + L +W+Y ILDEGH+IKN ++ ++ ++ + H
Sbjct: 1564 ITSYDVVRKDVDYL------------GQLLWNYCILDEGHIIKNSKSKITSAVKQLKAQH 1611
Query: 466 RIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSA 525
R+I+SGTPIQNN+ +LW+LF+F P LG + F+ Y P+ D ++ G+
Sbjct: 1612 RLILSGTPIQNNILDLWSLFDFLMPGFLGTERQFQATYGKPLQAARDSKCSAKDAEAGAL 1671
Query: 526 VAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEAFL 582
+ L +++ P+ LRR K+EV LS E I+ + L Q +LYE F
Sbjct: 1672 AMEALHKQVMPFLLRRTKDEV-----------LSDLPEKIIQDRYCDLCPVQLKLYEQFS 1720
Query: 583 NSEIV--LSAF-------------DGSPLA------ALTILKKICDHPLLLTKRAAEDVL 621
S + +S+ SP A AL L K+C HPLL+ D L
Sbjct: 1721 GSHVRHEISSIVKRNESTDTGEGNSASPKASSHVFQALQYLLKLCGHPLLVVGEKIPDSL 1780
Query: 622 DGMDSMLNPEDAALAEKL--AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-H 678
+ S P + + +L H + + E+ C I S + + G H
Sbjct: 1781 TTILSEFFPGTSDIMSELHKLHHSPKLIALHEILEE-----CGIGVDASSSEGAVSVGQH 1835
Query: 679 NVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLT 735
VLIF+Q + L++I+ + K +LR+DG+ + R +IV F + LLT
Sbjct: 1836 RVLIFAQHKAFLDIIERDLFHTHMKSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLT 1895
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+ VGGLGL LT AD ++ ++ WNP D+Q++DRA+R+GQ+K V V+RL+ GT+EEK+
Sbjct: 1896 THVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVM 1955
Query: 796 RKQIFK 801
Q FK
Sbjct: 1956 SLQRFK 1961
>gi|110755099|ref|XP_396302.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A containing DEAD/H box
1-like [Apis mellifera]
Length = 830
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 274/524 (52%), Gaps = 55/524 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA----LVVA 359
L P+Q GL WL +H Q GIL D+MGLGKT+Q+ FL L S L L+V
Sbjct: 262 LAPYQMVGLNWLAVMHAQNVNGILADEMGLGKTVQVIAFLTYLKESGLKGEKDGPHLIVV 321
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV---LQDKGVLLTTYDIVRNNS 416
P + + +W EL K+ +Y+GT + ++ + L D VLLTTY+++ +
Sbjct: 322 PSSTMENWNNELERWSPDLKVVQYYGTQEERKEMRFGWRNGDLDDVDVLLTTYNLISSTP 381
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQN 476
+ R + Y++ DE H++KN T R ++L+ I + HRI+++GTP+QN
Sbjct: 382 EERRLFRVMP---------LYYVVFDEAHMLKNMGTIRYENLVRINAKHRILLTGTPLQN 432
Query: 477 NLKELWALFNFCCPELLGDNK-----WFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
NL EL +L F P L + F + +LP ++ N + L ++++ +A +
Sbjct: 433 NLLELMSLLIFVMPSLFAGKQADLKSLFSKNPKLPSIKKNAEQPLFEQEQVKNA-----K 487
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
+ ++P+ LRRLK EV + L +K E ++ + Q+++Y + +E A
Sbjct: 488 QIMRPFVLRRLKAEVLRD--------LPEKKERMIKCPMIEKQQKMYTNLI-AEFSAEAD 538
Query: 592 DGSPLAALTI---LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
+ + + + L+K+ +HPLL+ + L + S L E + + D+
Sbjct: 539 QSTEVNGIGMMMQLRKLANHPLLVRDYYNKSKLKVISSRLAKEHSYKQKNADYVFEDLQW 598
Query: 649 KDDFQ-EQHDNISCKISFI------------LSLLDKLIP----EGHNVLIFSQTRKMLN 691
D+Q Q I+ + L +LD+L+P EGH VLIFSQ +L+
Sbjct: 599 MSDYQINQLTRTYKSIAGLGLPQELIPEAGKLKILDELLPKLKEEGHRVLIFSQFTMILD 658
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+++E + +G +LR+DG+T +DR ++N + E + IFLL+++ GGLG+ LT AD V
Sbjct: 659 ILEEYLTIRGQTYLRLDGSTPVTDRQCLINQYMEDENIFIFLLSTKAGGLGINLTAADTV 718
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
I+ D +NP D Q+ DR +R+GQK+ V + RL++ T+EE +Y
Sbjct: 719 IIHDIDFNPYNDKQAEDRCHRVGQKRSVSIIRLLSEDTIEEGMY 762
>gi|241602475|ref|XP_002405194.1| DNA repair and recombination protein RAD54B, putative [Ixodes
scapularis]
gi|215500578|gb|EEC10072.1| DNA repair and recombination protein RAD54B, putative [Ixodes
scapularis]
Length = 680
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 175/572 (30%), Positives = 288/572 (50%), Gaps = 75/572 (13%)
Query: 298 GKIGNMLFPHQREGLRWLWSLHCQ-----GKGGILGDDMGLGKTMQICGFLAGLFHS--- 349
+ L PHQ++GL +L+ + G G IL D+MGLGKT+Q + L
Sbjct: 69 ASLARCLRPHQQQGLVFLYECIMEMRPFDGGGAILADEMGLGKTLQCITLVWTLLRQGPY 128
Query: 350 ---RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYF-GTCVKTRQYELQYVLQDKGVL 405
+++R +++ P +L+ +W+KE ++ +R Y+ G K + Q L VL
Sbjct: 129 GGYPVLRRIIIITPSSLVKNWVKEFKKWLPNSNLRIYYVGQKNKVEGFLRQPSLYP--VL 186
Query: 406 LTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH 465
+ +Y++ S SL +F D +I DE H +KN + + A SL +
Sbjct: 187 ILSYEMYLRVSDSLANINF------------DLLICDEAHRLKNANIKIAGSLQNLGITR 234
Query: 466 RIIISGTPIQNNLKELWALFNFCCPELLGDNKW---------FKEKYELPILRGNDKHAL 516
+I+++GTP+QN+L+E + L +FC P +LG + F+ YE PIL+ A
Sbjct: 235 KILVTGTPVQNDLQEFFTLIDFCNPGILGKYPYVCQRIGPSSFRRVYEEPILQSRLPQAT 294
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+ +K +G A A EL + LRR ++ V + L K E +V+ R TS Q
Sbjct: 295 EEQKELGQARANELSRITALFVLRRTQDVV--------QSYLPGKAECVVFCRPTSLQLT 346
Query: 577 LYEAFLNSEIV-------LSAFDGSPLAALTILKKICDHPLLLTKR---------AAEDV 620
+Y L S V LS LA + L+K+C+HP L+T R +++D+
Sbjct: 347 VYRELLASNAVQACLSSYLSCDANHHLACILALRKLCNHPSLVTPRHMSLWGCFRSSQDL 406
Query: 621 LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNV 680
L ++ ++ ++ +A + + + + + SL D E +
Sbjct: 407 LPTKSQ----------KQFSLDMSKLAA-ESLEASSGKLKVLAAMLASLWDSSPRE--KI 453
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVG 739
++ S +MLN++QE KGY F+R+DG+T ++ R++IV F +FLL+ + G
Sbjct: 454 VVVSNFTRMLNVVQELCACKGYTFVRLDGSTSSTQRLEIVERFNSAHSDCFVFLLSCKAG 513
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G+GL L A R+++ D WNP+ D Q++ R +R GQ + V VYRL+T GTVEEKIY++Q+
Sbjct: 514 GVGLNLIGASRIVLYDVDWNPANDLQAMARVWRDGQGRHVYVYRLVTTGTVEEKIYQRQV 573
Query: 800 FKGGLFKTATEHKEQIR--YFSQQDLRELLSL 829
K L +T E K+ + FS +DL+ L +L
Sbjct: 574 MKLDLSRTVLEKKQDGKKAKFSLEDLKGLFTL 605
>gi|115438260|ref|XP_001218021.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Aspergillus terreus NIH2624]
gi|114188836|gb|EAU30536.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Aspergillus terreus NIH2624]
Length = 1418
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 264/518 (50%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GL+W+ SL+ GIL D+MGLGKT+Q + + + LV+
Sbjct: 538 VGGTLKEYQIRGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEKKKNNGPFLVI 597
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E + Y G +Q + Q + VLLTTY+ +
Sbjct: 598 VPLSTLTNWNLEFEKWAPAVSRVVYKGPPNARKQQQQQIRWGNFQVLLTTYEYI------ 651
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L + S +R+I++GTP+QNN
Sbjct: 652 ------IKDRPVLSKVKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNN 705
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 706 LPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQL--LVIRRLHKVLR 763
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ R ++ Q +LY + ++++V+S G
Sbjct: 764 PFLLRRLKKDV--EKD------LPDKQERVIKCRFSALQAKLYRQLMTHNKMVVSDGKGG 815
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP A
Sbjct: 816 KTGMRGLSNMLMQLRKLCNHPF---------VFEPVEDQMNPTRAT-------------- 852
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 853 --------NDLLWRTAGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGLKY 904
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ F G FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 905 LRLDGSTKSDDRSDLLKLFNAPGSEYFCFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 964
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL+T ++EEKI + FK
Sbjct: 965 LQAQDRAHRIGQKNEVRILRLITSNSIEEKILERAQFK 1002
>gi|68467321|ref|XP_722322.1| hypothetical protein CaO19.12471 [Candida albicans SC5314]
gi|68467550|ref|XP_722208.1| hypothetical protein CaO19.5004 [Candida albicans SC5314]
gi|46444164|gb|EAL03441.1| hypothetical protein CaO19.5004 [Candida albicans SC5314]
gi|46444289|gb|EAL03565.1| hypothetical protein CaO19.12471 [Candida albicans SC5314]
Length = 848
Score = 253 bits (645), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 178/567 (31%), Positives = 288/567 (50%), Gaps = 59/567 (10%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P ++ K+ +L PHQ G+++L+ + + KG I+ D+MGLGKT+Q +
Sbjct: 242 PDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARAKGCIMADEMGLGKTLQCLTLMW 301
Query: 345 GLFHS-----RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVL 399
L R I++ ++V P +L+ +W E+ + T+ EL L
Sbjct: 302 TLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKNSELGTAL 361
Query: 400 QD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
Q + VL+ +Y+ +R N L G+ E G M+ DEGH +KN
Sbjct: 362 QQWSTAQGRNIVRPVLIISYETLRRNVDKLAGT-----EVG-------LMLADEGHRLKN 409
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
+ +L + R+I+SGTPIQN+L E ++L NF P LG FK+ YE IL+
Sbjct: 410 GDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRIEFKKNYENAILK 469
Query: 510 GNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR 569
G D A D E+ G EL + + + +RR N++ S L K E +++
Sbjct: 470 GRDSTASDEEREKGDKKLNELSQMVSKFIIRR-TNDIL-------SKYLPIKYEYVLFTG 521
Query: 570 LTSCQRQLYEAFLNSEIVLSAFDGS---PLAALTILKKICDHPLLLTKRAAEDVLDGMDS 626
L+ Q+ +Y F+ S + G+ PL A+ +LKK+C+HP LL EDV +G +
Sbjct: 522 LSPMQKDIYNHFITSPEIKKLMKGTGSQPLKAIGMLKKLCNHPDLLD--LPEDV-EGSEE 578
Query: 627 MLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQ 685
+ P+D + IA + + +E S K + L K+ E + +++ S
Sbjct: 579 FI-PDDYQSS------IAGGSASRN-REIQTWFSGKFLILERFLQKINKETDDKIVLISN 630
Query: 686 TRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGL 743
+ L+LI++ K Y LR+DGT + R K+V+ F + + P IFLL+S+ GG G+
Sbjct: 631 YTQTLDLIEKMCRYKKYGVLRLDGTMNINKRQKLVDKFNDPN-GPEFIFLLSSKAGGCGI 689
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
L A+R++++DP WNP++D Q++ R +R GQKKD +YR ++ GT+EEKI+++Q K
Sbjct: 690 NLIGANRLVLMDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMS 749
Query: 804 LFKTATEHKEQI-RYFSQQDLRELLSL 829
L + KE + R FS +LR+L
Sbjct: 750 LSSCVVDEKEDVERLFSVANLRQLFKF 776
>gi|170094100|ref|XP_001878271.1| SNF2 superfamily chromatin remodeling protein [Laccaria bicolor
S238N-H82]
gi|164646725|gb|EDR10970.1| SNF2 superfamily chromatin remodeling protein [Laccaria bicolor
S238N-H82]
Length = 1936
Score = 253 bits (645), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 269/556 (48%), Gaps = 85/556 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLI 352
Y +P I L +Q+EG+ WL L GIL DDMGLGKT+Q IC + F
Sbjct: 1337 YTMPVTIKAELRKYQQEGVNWLAFLAKYQLHGILCDDMGLGKTLQSICILSSKHFERAER 1396
Query: 353 KRA-----------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD 401
RA L++ P TL HW E+ + Y G + L L
Sbjct: 1397 HRATNSQDSVHLPSLIICPPTLTGHWYYEILKYADNLLPILYTGN--SRERTRLLSKLHS 1454
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++T+Y++VRN+ +L +D W Y +LDEGH+IKN T+ K++ I
Sbjct: 1455 FDVVITSYEVVRNDISNL------------EDLHWLYCVLDEGHVIKNSKTKLTKAVKCI 1502
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+I+SGTPIQNN+ ELW+LF+F P LG F E++ PIL D A +
Sbjct: 1503 RAQHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEASFNERFGKPILSNRDGKA--KNSE 1560
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
+ + L +++ P+ LRRLK +V H+ L K + L+ Q+ LY+ F
Sbjct: 1561 AAALALEALHKQVLPFLLRRLKEDVLHD--------LPPKIIQDYYCELSELQKYLYDDF 1612
Query: 582 LNSEIVLSAFDG-------SP-------LAALTILKKICDHPLLLTKRAAEDVL------ 621
S+ SA D P +L L+K+C+HP L+ K E +
Sbjct: 1613 SKSKARTSAEDTIQASLSTKPEGGQQHVFQSLQYLRKLCNHPALVLKSNKEVISAALENA 1672
Query: 622 ----DGMDSMLNPEDAALAEKLAMHI----ADVAEKDDFQEQHDNISCKISFILSLLDKL 673
DG++ + N ++L + + +A D + + L+D +
Sbjct: 1673 NVQGDGLNDIRNAPKLLALKQLLLDCGIGGSAIASADSQKSE-------------LIDTV 1719
Query: 674 IPEG-----HNVLIFSQTRKMLNLIQE---SIGSKGYKFLRIDGTTKASDRVKIVNDFQE 725
G H VLIF Q ++ML++I+ + ++R+DG T A R IV F
Sbjct: 1720 EEPGSSFSQHRVLIFCQMKQMLDIIESDLFKVHMPSVTYMRLDGATDAGKRHAIVQTFNS 1779
Query: 726 GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLM 785
LLT+ VGGLGLTLT AD VI V+ WNP D Q++DRA+RIGQKK V VYRL+
Sbjct: 1780 DPSIDCLLLTTHVGGLGLTLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLI 1839
Query: 786 TCGTVEEKIYRKQIFK 801
T GT+EEKI Q FK
Sbjct: 1840 TKGTLEEKIMGLQRFK 1855
>gi|444316964|ref|XP_004179139.1| hypothetical protein TBLA_0B08040 [Tetrapisispora blattae CBS 6284]
gi|387512179|emb|CCH59620.1| hypothetical protein TBLA_0B08040 [Tetrapisispora blattae CBS 6284]
Length = 955
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 283/533 (53%), Gaps = 62/533 (11%)
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKEL------- 371
G I+ D+MGLGKT+Q + L RLI + ++V P +L+++W EL
Sbjct: 386 GCIMADEMGLGKTLQCITLMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPG 445
Query: 372 --TAVGLSAKIREYFGTCVKTRQYELQYVLQDKG------VLLTTYDIVRNNSKSLRGSS 423
+ + + K + + T ++ Q KG VL+ +Y+ +R N L+ +
Sbjct: 446 TLSPLAIDGK-KSSLMSSNSTVSEAIRAWGQAKGRNIVKPVLIISYETLRRNVDQLKNT- 503
Query: 424 FISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWA 483
E G M+ DEGH +KN + +L I R+I+SGTPIQN+L E +A
Sbjct: 504 ----EVG-------LMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFA 552
Query: 484 LFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLK 543
L NF P LLG F++ YE+PILR D A D+E G+ +L + + +RR
Sbjct: 553 LLNFSNPGLLGTRLEFRKNYEIPILRSRDADATDKEIAKGTQQLTQLSNIVSKFIIRR-T 611
Query: 544 NEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS---EIVLSAFDGS-PLAAL 599
N++ S L K E ++++ L QR+LY+ F+ S + V++ +GS PL A+
Sbjct: 612 NDIL-------SKYLPCKYEHVIFVNLKPFQRELYKRFVKSRDIKKVVNGVNGSQPLKAI 664
Query: 600 TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNI 659
+LKK+C+HP LL ++ D ++S++ +D + + M+ Q ++
Sbjct: 665 GLLKKLCNHPNLL------NLEDELNSVMT-DDFDIPDDFNMN----GNSRTIQTEY--- 710
Query: 660 SCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVK 718
S K S + L ++ + + +++ S + L+LI++ +K Y LR+DGT + R K
Sbjct: 711 SGKFSILERFLHQIKTKSDDKIVLISNYTQTLDLIEKMCRNKHYGVLRLDGTMSINKRQK 770
Query: 719 IVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKK 777
+V+ F + + IFLL+S+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKK
Sbjct: 771 LVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKK 830
Query: 778 DVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
D +YR ++ GT+EEKI+++Q K L + KE + R FS +LR+L L
Sbjct: 831 DCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDAKEDVERLFSADNLRQLFQL 883
>gi|358394253|gb|EHK43646.1| hypothetical protein TRIATDRAFT_319009 [Trichoderma atroviride IMI
206040]
Length = 802
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 174/570 (30%), Positives = 282/570 (49%), Gaps = 72/570 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ KI L PHQ EG+++++ + +G I+ D+MGLGKT+Q +
Sbjct: 199 PKVPVVIDPKIAKCLRPHQIEGVKFMYKCVTGLVDEKAQGCIMADEMGLGKTLQCITLMW 258
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A+VV P +L+ +W ELT L F K + EL+
Sbjct: 259 TLLKQSPSAGKSTIQKAIVVCPASLVKNWANELTK-WLGPNAINPFAIDGKAPKEELKRQ 317
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + V++ +Y+ +R N + L+ + + DEGH +K
Sbjct: 318 LRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI------------GLLFCDEGHRLK 365
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + +L ++ + R+I++GTPIQN+L E +AL +F P+LLG F++++E+PIL
Sbjct: 366 NADSNTFNALNDLKVSRRVILTGTPIQNDLTEYFALTSFANPDLLGSRLEFRKRFEIPIL 425
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A ++++R G EL + + +RR N++ S L K E +V+
Sbjct: 426 RGRDADASEQDRRRGDECTSELLGVVNKFLIRR-TNDIL-------SKYLPVKYEHVVFC 477
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + + G PL A+ ILKK+C+HP D+L+ D
Sbjct: 478 NLAPFQLDLYNYFITSPDIQALLRGKGSQPLKAINILKKLCNHP---------DLLNLAD 528
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
+ E D K+ D I S + +LD+++ + +
Sbjct: 529 DLPGSEKC--------FPGDYVPKESRGRDRD-IKPWYSGKMQVLDRMLAKIREDTNDKI 579
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQE--GDVAPIFLLTSQV 738
++ S L+L + + Y LR+DGT + R K+V+ F + GD IFLL+S+
Sbjct: 580 VLISNYTSTLDLFERLCRDRQYGCLRLDGTMNVNKRQKLVDRFNDPNGDEF-IFLLSSKA 638
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 639 GGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQ 698
Query: 799 IFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 699 SHKQSLSSCVVDSAEDVERHFSLDSLRELF 728
>gi|125538184|gb|EAY84579.1| hypothetical protein OsI_05951 [Oryza sativa Indica Group]
Length = 936
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 273/534 (51%), Gaps = 77/534 (14%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-LFHSRLIK-----RALVVAP 360
+Q+EG+ WL L GIL DDMGLGKT+Q +A + SR ++L++ P
Sbjct: 350 YQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVAADIAESRARNDEQDPKSLIICP 409
Query: 361 KTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
TL++HW E+ S+ ++ +Y G+ Q+ DK V++T+YDI+R +
Sbjct: 410 STLVAHWEYEIEKYIDSSIMKPLQYIGSSQDRIILRSQF---DKFNVIITSYDIIRKDID 466
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
L ++ W+Y +LDEGH+IKN ++ ++ ++ + HR+I+SGTPIQNN
Sbjct: 467 FL------------ENVFWNYCVLDEGHIIKNSRSKITSAVKQLKAQHRLILSGTPIQNN 514
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
+ ELW+LF+F P LG K F+ Y P+L D ++ G + L +++ P+
Sbjct: 515 VLELWSLFDFLMPGFLGTEKQFQATYGKPLLAAKDPKCSAKDAEAGILAMEALHKQVMPF 574
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEAFLNS---------- 584
LRR K+EV LS E I+ + L+ Q +LY+ F NS
Sbjct: 575 LLRRTKDEV-----------LSDLPEKIIQDRYCNLSLLQLKLYDKFSNSNAKQEISTIV 623
Query: 585 -EIVLSAFDGSPLA------ALTILKKICDHPLLLTKRAAEDVL------DGMDSMLNPE 631
E L P A AL L K+C HPLL+T + D L GM +
Sbjct: 624 KENELDQSTSQPKATRHVFQALQYLLKLCSHPLLVTGESPPDYLVDLLKEIGMGTGDELH 683
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-HNVLIFSQTRKML 690
D + KL VA ++ QE C I +S D G H VLIF+Q + +L
Sbjct: 684 DLHHSPKL------VALQEILQE------CGIGSEISSPDASAAIGQHRVLIFAQHKALL 731
Query: 691 NLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
++I++ + + +LR+DG+ + R +IV F + LLT+ VGGLGL LT
Sbjct: 732 DIIEKDLFQSHMRSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTS 791
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
AD ++ ++ WNP D Q++DRA+R+GQ+K V V+RL+ GT+EEK+ Q FK
Sbjct: 792 ADTLVFMEHDWNPMKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFK 845
>gi|302408325|ref|XP_003001997.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum
VaMs.102]
gi|261358918|gb|EEY21346.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum
VaMs.102]
Length = 857
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 282/569 (49%), Gaps = 69/569 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++++ + G I+ D+MGLGKT+Q L
Sbjct: 253 PKVPVVIDPRLCKVLRPHQIEGVKFMYKCVTGMIDERANGCIMADEMGLGKTLQCIALLW 312
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A+VV P +L+ +W EL L A F K + EL
Sbjct: 313 TLLKQSPEAGKSAIQKAIVVCPSSLVKNWANELVK-WLGADAVTPFAIDGKASKEELTRQ 371
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + V++ +Y+ +R N L+ + M+ DEGH +K
Sbjct: 372 LRQWAIASGRAVTRPVIIVSYETLRLNVDELKHTKI------------GLMLCDEGHRLK 419
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q SL + + RII+SGTPIQN+L E ++L +F P+LLG F++++ELPIL
Sbjct: 420 NGDSQTFSSLNSLNVSRRIILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPIL 479
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A + +++ G EL + + +RR N++ S L K E +V+
Sbjct: 480 RGRDADADEVDRKKGDECLSELLGIVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 531
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY FL S + + G PL A+ ILKK+C+HP LL D L G +
Sbjct: 532 NLAPFQLDLYNYFLTSPDIQALLRGKGSQPLKAINILKKLCNHPDLLN---LNDDLPGSE 588
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
+ P+ D KD ++ + S + +LD+++ +
Sbjct: 589 NCW-PD-------------DYVPKDARGHRNREVKPWYSGKMQVLDRMLARIRQDTNDKI 634
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVG 739
++ S + L++ + S+ Y LR+DGT + R K+V+ F + +FLL+S+ G
Sbjct: 635 VLISNYTQTLDIFERLCRSRAYGCLRLDGTMNVNKRQKLVDKFNDPAGEEFVFLLSSKAG 694
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 695 GCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQS 754
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 755 HKQSLSSCVVDSAEDVERHFSLDGLRELF 783
>gi|332028347|gb|EGI68394.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1
[Acromyrmex echinatior]
Length = 845
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 272/527 (51%), Gaps = 61/527 (11%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA----LVVA 359
L P+Q GL WL LH Q GIL D+MGLGKT+Q+ FL L + L+ L+V
Sbjct: 280 LAPYQIVGLNWLAILHAQNVNGILADEMGLGKTIQVIAFLTYLKEAELLDEKDGPHLIVV 339
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV---LQDKGVLLTTYDIVRNNS 416
P + + +W+ EL S K+ +Y+G+ + ++ + + L D VLLTTY ++ +
Sbjct: 340 PSSTMENWMDELERWSPSLKVVQYYGSQEERKEMRMGWRNGDLDDVDVLLTTYSLICSTP 399
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQN 476
+ R + +Y++ DE H++KN S+ R ++L+ I + RI+++GTP+QN
Sbjct: 400 EERRLFRVMP---------LNYVVFDEAHMLKNMSSVRYENLVRINAKRRILLTGTPLQN 450
Query: 477 NLKELWALFNFCCPELLGDNK-----WFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
NL EL +L F P L + F + + P + N + + +++ +A +
Sbjct: 451 NLLELMSLLIFVMPSLFAGKQADLKSLFSKNPKAPSDKKNGEQPMFEREQVKNA-----K 505
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN------SE 585
E ++P+ LRRLK EV + L K + I+ L Q+ +Y + SE
Sbjct: 506 EIMRPFVLRRLKVEVLRD--------LPYKKDEIIRCTLIEKQQSMYNKLVAQFSAEASE 557
Query: 586 IVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
I D + + L+K+ +HPLL+ E+ L+ + S L E + D
Sbjct: 558 IT----DVNGTGMMMQLRKLANHPLLIRDYYDENKLNAIASRLAKEPGYKQKNPEYVFED 613
Query: 646 VAEKDDFQ-EQHDNISCKISFI------------LSLLDKLIPE----GHNVLIFSQTRK 688
+ D+Q Q I I+ L LDK++P+ GH VLIFSQ
Sbjct: 614 LIWTSDYQINQLTRIYKSIAGFGLPQELIPEAGKLKELDKILPQLKTDGHRVLIFSQFTM 673
Query: 689 MLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKA 748
+L++++E + +G FLR+DG+T ++R ++N + E IFLL+++ GGLG+ LT A
Sbjct: 674 VLDILEEYLTIRGQTFLRLDGSTPVTERQTLINKYTEDPSIFIFLLSTRAGGLGINLTAA 733
Query: 749 DRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
D VI+ D +NP D Q+ DR +R+GQKK V + RL++ GT+EE +Y
Sbjct: 734 DTVILHDIDFNPYNDKQAEDRCHRVGQKKPVSIIRLLSEGTIEEGMY 780
>gi|302755712|ref|XP_002961280.1| hypothetical protein SELMODRAFT_403041 [Selaginella moellendorffii]
gi|300172219|gb|EFJ38819.1| hypothetical protein SELMODRAFT_403041 [Selaginella moellendorffii]
Length = 3598
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 169/544 (31%), Positives = 271/544 (49%), Gaps = 80/544 (14%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVA 359
G L +Q GLRWL SL+ G+L D+MGLGKT+Q+ + L ++ + LVV
Sbjct: 1132 GGTLREYQMNGLRWLVSLYNNHLNGMLADEMGLGKTVQVIALICYLIEAKHDRGPFLVVV 1191
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSKS 418
P ++L +W+ E+T + Y GT + R+ ++++Q + +L+TTY+ + N +
Sbjct: 1192 PSSVLPNWMSEITRWAPNVIKLSYTGTPDERRRLFKEHIVQQQFNILVTTYEYLMNKNDR 1251
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNL 478
+ S W Y+I+DEGH IKN S + L S +R++++GTPIQNNL
Sbjct: 1252 PKLSKIR----------WHYIIIDEGHRIKNASCKLNAELKHYQSNNRLLLTGTPIQNNL 1301
Query: 479 KELWALFNFCCPELLGDN----KWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
ELWAL NF P + + +WF + +E G+ + L E+ + + L + +
Sbjct: 1302 DELWALLNFLLPSIFNSSEDFAQWFNKPFESVADNGDTEALLTEEENL--LIINRLHQVL 1359
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI------VL 588
+P+ LRRLK++V +E L +K E RL C+ Y+ L + +
Sbjct: 1360 RPFVLRRLKHKVEYE--------LPEKIE-----RLVRCEASAYQRLLMKRVKEKMGGIG 1406
Query: 589 SAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
A S + L+ IC+HP L S ++ E+A L H
Sbjct: 1407 HAKVRSVQNTVMELRNICNHPYL--------------SHVHTEEAESL--LPSHYLPTV- 1449
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
++ L +LD+++P+ H VL+FS ++LN++++ + KGYK+
Sbjct: 1450 ------------IRLCGKLEMLDRILPKLKKSNHRVLLFSTMTRLLNVLEDYLTWKGYKY 1497
Query: 705 LRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG T S+R +++ F D A +FLL+ + GG+G+ L AD VI+ D WNP D
Sbjct: 1498 LRLDGHTMGSERGSLIDRFNAPDSDAFLFLLSIRAGGIGVNLQAADTVIIFDTDWNPQVD 1557
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI---------YRKQIFKGGLFKTATEHKEQ 814
Q+ RA+RIGQK+DV+V RL T T+EE++ Q G F T +++
Sbjct: 1558 LQAQARAHRIGQKRDVLVLRLETVNTIEEQVRASAEHKLGVANQSITAGFFDNNTSAEDR 1617
Query: 815 IRYF 818
Y
Sbjct: 1618 REYL 1621
>gi|328702354|ref|XP_003241882.1| PREDICTED: TATA-binding protein-associated factor 172-like
[Acyrthosiphon pisum]
Length = 1782
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 272/553 (49%), Gaps = 76/553 (13%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
S + +P I L +Q+ G+ WL L+ GIL DDMGLGKT+Q LA +++
Sbjct: 1196 SDFKVPIMINAKLRSYQQTGVNWLAFLNKYKLHGILCDDMGLGKTIQSLCILASDHYNKN 1255
Query: 352 IKR------------ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVL 399
K ++VV P TL+ HW E+ +R + + + +L+
Sbjct: 1256 KKYKETGGPDSVPLPSIVVCPPTLIGHWTHEVQKFIPKNILRPLQYSGLPVERQKLRVYA 1315
Query: 400 QDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLL 459
D + + +YDIVR + + F +Y ILDE H+IKN T+ ++++
Sbjct: 1316 DDYNLFIVSYDIVRKDIEFFSKIKF------------NYCILDECHIIKNGKTKASQAIK 1363
Query: 460 EIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDRE 519
++ + HR+++SGTPIQN++ ELW+LF+F P LG K F KY PIL D +E
Sbjct: 1364 QLKANHRLVLSGTPIQNSVLELWSLFDFLMPGFLGTEKQFAAKYSKPILASRDAKCSSKE 1423
Query: 520 KRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYE 579
+ G + L ++ P+ LRR+K +V + L K + L+ Q+QLYE
Sbjct: 1424 QETGVLAMEALHRQVLPFVLRRMKQDVLSD--------LPAKITQDYYCDLSPIQQQLYE 1475
Query: 580 AFLNSEI--VLS-------AFDGSP-----LAALTILKKICDHP-LLLTKRAAE------ 618
F + I LS + + P L AL L+ +C+HP L+LT + +
Sbjct: 1476 DFSKTHIHKHLSETETDEKSVNNPPNKNNILQALRYLQNVCNHPKLVLTPQHPQYSNIIK 1535
Query: 619 DVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGH 678
+ + S+ + + AA L + D C I + S D +I + H
Sbjct: 1536 QISESNSSLTDIQHAAKLPALKQLLMD---------------CGIGLV-SNNDTVISQ-H 1578
Query: 679 NVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLT 735
LIF Q + MLN+I+ + +LR+DG+ S R +VN F ++T
Sbjct: 1579 RALIFCQLKSMLNIIENDLFKAHMPNVSYLRLDGSVPVSQRYALVNRFNVDPSIDTLIMT 1638
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+QVGGLGL LT AD VI V+ W+P D Q++DRA+RIGQKK V VYRL+T T+EEKI
Sbjct: 1639 TQVGGLGLNLTGADTVIFVEHDWSPMKDLQAMDRAHRIGQKKVVNVYRLITRSTLEEKIM 1698
Query: 796 RKQIFKGGLFKTA 808
Q FK KTA
Sbjct: 1699 NFQKFK---LKTA 1708
>gi|242010568|ref|XP_002426037.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510047|gb|EEB13299.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 853
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 177/574 (30%), Positives = 295/574 (51%), Gaps = 69/574 (12%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-------- 355
L +Q GL WL LH +G GIL D+MGLGKT+QI FLA L + ++
Sbjct: 293 LASYQMVGLNWLLVLHHKGLNGILADEMGLGKTVQIIAFLAYL--QEMSEKNENGDGDGS 350
Query: 356 ---LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV---LQDKGVLLTTY 409
L+V P + + +W EL S K+ Y+G+ + + +Q+ ++D V+LTTY
Sbjct: 351 NPHLIVVPSSTMDNWRNELERWCPSLKVFLYYGSMDERKAMRIQFSQHGIKDLDVILTTY 410
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
+++ + S+ + + ++Y+I DE H++KN +TQR ++L+ + + HRI++
Sbjct: 411 NLITSTSEEKKMFKVLP---------FNYVIFDEAHMLKNMNTQRFENLMRVNAKHRILL 461
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNK-WFKEKYELPILRGNDKHALDREKRIGSAVAK 528
+GTP+QNNL EL +L F PE+ K + K + G + + ++ + AK
Sbjct: 462 TGTPLQNNLLELMSLLTFVMPEMFAKKKEYLKCLFTRNKTNGATIETIPKFEQEQVSQAK 521
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL------ 582
++ +QP+ LRRLK +V + L KK E I++ + Q+ YE +
Sbjct: 522 KI---MQPFVLRRLKKDVLKD--------LPKKTEEIIYCEMIEKQKFKYENLISTFSKK 570
Query: 583 --NSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
N + S L+ + L+K+ +HPLLL + E+ L+ + +L E +
Sbjct: 571 TENKNTKEDIDEVSGLSMMMDLRKLSNHPLLLREIYDENKLESIAKILAKEKDYKETNVG 630
Query: 641 MHIADVAEKDDFQ-----------------EQHDNISCKISFILSLLDKLIPEGHNVLIF 683
I D++ D+Q ++ S K + +L KL E H VLIF
Sbjct: 631 YIIEDLSVMSDYQIHALCKSFKSLSEYELKDEEFVKSGKFQKLDEMLPKLKEENHRVLIF 690
Query: 684 SQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGL 743
SQ ML++++E + +G+K+LR+DG+T+ R ++++ F E +F+L+++ GGLG+
Sbjct: 691 SQFVIMLDVMEEYLRIRGHKYLRLDGSTQVIIRQELIDAFNEDSSIFVFILSTRAGGLGI 750
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
LT AD VI+ D +NP D Q+ DR +R+GQ K V VY+ + T+EE I++ + K
Sbjct: 751 NLTAADTVIIHDMDFNPYNDKQAEDRCHRVGQTKPVSVYKFIGKNTIEENIHQVALEKLN 810
Query: 804 LFKTATEHKEQIRYFSQQDLRELLSLPKQ--GFD 835
L E K Q + + ++SL KQ GFD
Sbjct: 811 L-----EKKISSEESEQSERKSVVSLLKQALGFD 839
>gi|374107777|gb|AEY96684.1| FAEL297Wp [Ashbya gossypii FDAG1]
Length = 895
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 273/529 (51%), Gaps = 52/529 (9%)
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKE-------- 370
G I+ D+MGLGKT+Q + L I++ ++V P +L+++W E
Sbjct: 325 GCIMADEMGLGKTLQCIALMWTLLRQGSQGRPTIEKCIIVCPSSLVNNWANEIVKWLGPD 384
Query: 371 -LTAVGLSAKIREYFGTCV--KTRQYEL-QYVLQDKGVLLTTYDIVRNNSKSLRGSSFIS 426
L+ + + + V RQ+ + Q K VL+ +Y+ +R N ++L+G
Sbjct: 385 ALSPLAIDGRKSSLSNGSVAQSVRQWAIAQGRNVVKPVLIISYETLRRNVENLKGCKV-- 442
Query: 427 DEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFN 486
M+ DEGH +KN + SL I R+I+SGTPIQN+L E +AL N
Sbjct: 443 ----------GLMLADEGHRLKNGDSLTFTSLDSINCPRRVILSGTPIQNDLSEYFALLN 492
Query: 487 FCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEV 546
F P LLG F++ +E+PILRG D A D+E G EL + + + +RR N++
Sbjct: 493 FSNPGLLGTRAQFRKNFEIPILRGRDADANDKEIAAGEVKLHELSQIVSKFIIRR-TNDI 551
Query: 547 FHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS---PLAALTILK 603
S L K E I+++ L+ Q+ +YE F+ S V G+ PL A+ +LK
Sbjct: 552 L-------SKYLPCKYEHILFVNLSPMQKAIYEHFVRSREVAKLMKGTGSQPLKAIGLLK 604
Query: 604 KICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKI 663
K+C+HP LL D + G +++ P+D A + + + Q H S K
Sbjct: 605 KLCNHPDLLD---LPDEIAGSTNLI-PDDYQSA--MTHNSRGGRSHVEVQTTH---SSKF 655
Query: 664 SFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVND 722
+ + L K+ E ++ +++ S + L+LI++ Y LR+DGT + R K+V+
Sbjct: 656 AILERFLFKIKHESNDKIVLISNYTQTLDLIEKMCRYNHYGVLRLDGTMTINKRQKLVDK 715
Query: 723 FQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 781
F + IFLL+S+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKKD +
Sbjct: 716 FNDPSGEEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFI 775
Query: 782 YRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
YR +T G++EEKIY++Q K L + KE + R FS +LR+L
Sbjct: 776 YRFITTGSIEEKIYQRQSMKMSLSSCVVDEKEDVERLFSSDNLRQLFQF 824
>gi|156544311|ref|XP_001607169.1| PREDICTED: ATP-dependent helicase brm [Nasonia vitripennis]
Length = 1587
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 167/557 (29%), Positives = 277/557 (49%), Gaps = 82/557 (14%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
+++ M+ GK+ +Q +GL W+ SL GIL D+MGLGKT+Q + L +
Sbjct: 747 QASIMVNGKLKE----YQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKK 802
Query: 351 LIKRA-LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
+ L++ P + LS+WI E S + Y G+ R + Q VLLTTY
Sbjct: 803 KVNGPFLIIVPLSTLSNWILEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTY 862
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRII 468
+ + I D++ W YMI+DEGH +KN + + L + HR++
Sbjct: 863 EYI------------IKDKSVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLL 910
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
++GTP+QN L ELWAL NF P + F++ + P +K L+ E+ I + +
Sbjct: 911 LTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI--LIIR 968
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
L + ++P+ LRRLK EV + L K E I+ ++ Q+ LY+ + ++L
Sbjct: 969 RLHKVLRPFLLRRLKKEV--------ESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLL 1020
Query: 589 SAFDGSP------------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
+ DGS + + L+K+C+HP + A+
Sbjct: 1021 T--DGSEKGKRGKGGAKALMNTIVQLRKLCNHPFMFQ--------------------AIE 1058
Query: 637 EKLAMH-----IADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLN 691
EK + H + ++ D ++ S K + +L KL GH VL+F Q +++
Sbjct: 1059 EKYSEHLGIQGVGLISGPDLYR-----ASGKFELLDRILPKLKATGHRVLLFCQMTQLMT 1113
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADR 750
++++ + +G+++LR+DGTTKA DR ++ F + +F+L+++ GGLGL L AD
Sbjct: 1114 IMEDYLNWRGFRYLRLDGTTKAEDRGDLLKRFNDPSSDYFLFILSTRAGGLGLNLQAADT 1173
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFK 801
VI+ D WNP D Q+ DRA+RIGQK +V V RLMT +VEE+I Y+ +++ +
Sbjct: 1174 VIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQ 1233
Query: 802 GGLFKTATEHKEQIRYF 818
G+F + E+ ++
Sbjct: 1234 AGMFDQKSTGSERQQFL 1250
>gi|365096977|ref|ZP_09331325.1| SNF2-like protein [Acidovorax sp. NO-1]
gi|363413598|gb|EHL20792.1| SNF2-like protein [Acidovorax sp. NO-1]
Length = 932
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 172/539 (31%), Positives = 261/539 (48%), Gaps = 85/539 (15%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKRALVVAPKT 362
L P+Q EGL WL L QG GGIL DDMGLGKT Q + LA RL + ALVV P +
Sbjct: 429 LRPYQLEGLAWLQYLRAQGLGGILADDMGLGKTAQALAHVLAEKEAGRLTRPALVVLPTS 488
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGS 422
LL +W E T + ++ G R ++ D ++LTTY ++ + ++L
Sbjct: 489 LLFNWQAEATRMAPGLRVLALHGASRGQRYLQIA----DHDLVLTTYPLLWRDVEALAAQ 544
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELW 482
F +ILDE ++KN ++ A++L ++ + H + ++GTP++N+L ELW
Sbjct: 545 PF------------HLLILDEAQMVKNAGSRSARALRKLQAPHLLCLTGTPLENHLSELW 592
Query: 483 ALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRL 542
A F+F P L D + F ++ PI E+ + A+ L +R++P+ LRR
Sbjct: 593 AQFDFLMPGFLSDVRSFNARWRKPI-----------EENGETLRAQLLSQRVRPFILRRR 641
Query: 543 KNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF-------LNSEIVLSAFDGSP 595
K +V E L + E+I ++L QR+LYEA + + +FDG+
Sbjct: 642 KQDVATE--------LPPRTEVIQRVQLQGKQRELYEAVRTTADKQVRRALERQSFDGAQ 693
Query: 596 LA---ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
+ AL L+++C P L+ K
Sbjct: 694 ITILDALLKLRQVCCDPRLV------------------------------------KGTT 717
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
+ H K+ + +L L+ EG VL+FSQ +ML L E + + +L + G T
Sbjct: 718 KTAHTMERAKLELLADMLPALVDEGRRVLVFSQFTEMLALAAELLDTLALPYLTLTGQTP 777
Query: 713 ASDRVKIVNDFQEGDV--APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
R +V FQ D API L++ + GGLGL LT AD VI +DP WNP+ + Q+ RA
Sbjct: 778 PRLRGAVVRQFQAQDATSAPILLVSLKAGGLGLNLTAADTVIHLDPWWNPAVEEQATARA 837
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH-KEQIRYFSQQDLRELLS 828
+RIGQ + V VY+L+ G++EE++ Q K L + H E FS+ DL LL+
Sbjct: 838 HRIGQNQPVFVYKLVVEGSIEERMLELQARKAALAQGVLGHDAEGAVKFSEADLHALLA 896
>gi|367012103|ref|XP_003680552.1| hypothetical protein TDEL_0C04520 [Torulaspora delbrueckii]
gi|359748211|emb|CCE91341.1| hypothetical protein TDEL_0C04520 [Torulaspora delbrueckii]
Length = 1313
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 272/547 (49%), Gaps = 90/547 (16%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA---- 355
IG L +Q GL W+ SL+ GIL D+MGLGKT+Q + L+ +K+
Sbjct: 451 IGGTLKEYQIRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYE---VKKEPGPF 507
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
LV+ P + +++W E S Y GT + R + Q + VLLTTY+ +
Sbjct: 508 LVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRRSLQFQVRSGNFDVLLTTYEYI--- 564
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPI 474
I D + W +MI+DEGH +KN ++ + ++ + +R+I++GTP+
Sbjct: 565 ---------IKDRSVLAKPDWAHMIIDEGHRMKNAQSKLSYTITHYYHTRNRLILTGTPL 615
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
QNNL ELWAL NF P++ K F++ + P + L+ + + + L + +
Sbjct: 616 QNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVL 675
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFD 592
+P+ LRRLK EV E D L K E ++ +L+ Q QLYE L N+ V + +
Sbjct: 676 RPFLLRRLKKEV--EKD------LPDKVEKVIKCKLSGLQHQLYEQMLKHNALFVGAGTE 727
Query: 593 GSPLAAL-------TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
G+ + L+KIC+HP V D ++ ++NP
Sbjct: 728 GATKGGIKGLNNKIMQLRKICNHPF---------VFDEVEGVINP--------------- 763
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKG 701
++ + +++ LLD+++P+ GH VL+F Q ++++++++ + KG
Sbjct: 764 -------TRENSPLLYRVAGKFELLDRVLPKFRATGHRVLMFFQMTQVMDIMEDFLRMKG 816
Query: 702 YKFLRIDGTTKASDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDP 756
K++R+DG TK DR ++ DF AP FLL+++ GGLGL L AD VI+ D
Sbjct: 817 LKYMRLDGGTKTEDRTDMLKDFN----APNSDYFCFLLSTRAGGLGLNLQTADTVIIFDT 872
Query: 757 AWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKT 807
WNP D Q+ DRA+RIGQK +V + RL+T TVEE I + ++ + G F
Sbjct: 873 DWNPHQDLQAQDRAHRIGQKNEVRILRLITTDTVEEVILERATQKLDIDGKVIQAGKFDN 932
Query: 808 ATEHKEQ 814
+ +EQ
Sbjct: 933 KSTAEEQ 939
>gi|380022521|ref|XP_003695092.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase brm-like [Apis
florea]
Length = 2019
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 261/536 (48%), Gaps = 68/536 (12%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLLS 365
+Q +GL WL SL GIL D+MGLGKT+Q + L + + L++ P + LS
Sbjct: 1199 YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLS 1258
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W+ E S + Y G+ R + Q VLLTTY+ V I
Sbjct: 1259 NWVLEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYV------------I 1306
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKELWAL 484
D+ W YMI+DEGH +KN + + L + HR++++GTP+QN L ELWAL
Sbjct: 1307 KDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWAL 1366
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
NF P + F++ + P +K L+ E+ I + + L + ++P+ LRRLK
Sbjct: 1367 LNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI--LIIRRLHKVLRPFLLRRLKK 1424
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--------- 595
EV + L K E I+ ++ Q+ LY+ + ++L+ DGS
Sbjct: 1425 EV--------ESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLT--DGSEKGKQGKGGA 1474
Query: 596 ---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
+ + L+K+C+HP + A+ EK H+
Sbjct: 1475 KALMNTIVQLRKLCNHPFMFQ--------------------AIEEKYCEHVGTQGSGVIT 1514
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
S K + +L KL H VL+F Q +++ ++++ + +G+ +LR+DGTTK
Sbjct: 1515 GPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTK 1574
Query: 713 ASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
A DR ++ F + G +FLL+++ GGLGL L AD VI+ D WNP D Q+ DRA+
Sbjct: 1575 AEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 1634
Query: 772 RIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQIRYF 818
RIGQK +V V RLMT +VEE+I Y+ +++ + G+F + E+ ++
Sbjct: 1635 RIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFL 1690
>gi|327403655|ref|YP_004344493.1| SNF2-like protein [Fluviicola taffensis DSM 16823]
gi|327319163|gb|AEA43655.1| SNF2-related protein [Fluviicola taffensis DSM 16823]
Length = 1124
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 283/549 (51%), Gaps = 100/549 (18%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA 355
LP K L +QREG WL L+ G GGIL DDMGLGKT+Q+ +L+ + +++
Sbjct: 659 LPLKFETELRHYQREGYHWLHFLNDFGFGGILADDMGLGKTIQLLAYLSK---KQEVEKG 715
Query: 356 --LVVAPKTLLSHWIKELTAVGLSAKIREYFGT--CVKTRQYELQYVLQDKGVLLTTYDI 411
L++ P +L+ +W E +I + G+ T +E YDI
Sbjct: 716 THLIIVPTSLVFNWKDETAKFTPHLRILDLHGSKRVKATHHFE-------------AYDI 762
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
V + +L +SD D ++D +ILDEG IKNP ++R K++ + S R +++G
Sbjct: 763 VLSTYGTL-----LSDIRYLKDFVFDTIILDEGQAIKNPDSKRYKTVRLLQSKQRFVLTG 817
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
TPI+NN +++++ +FC P + G K FK+ + +PI + D S AKEL+
Sbjct: 818 TPIENNTLDIFSILSFCNPGMFGSVKQFKDHFAMPIDKFQD-----------SQRAKELQ 866
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN--SEIVLS 589
+RI P+ LRR K +V + L +K EMIV+ + Q+++Y+ + E ++S
Sbjct: 867 KRIHPFLLRRTKKQV--------ATELPEKTEMIVYCEMDHEQQRVYDVYKTELKEYLMS 918
Query: 590 AFDGS-------PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMH 642
D + LA LT L++IC+ P +++N + E+ A
Sbjct: 919 EPDFTDGQSSMHVLAGLTKLRQICNSP----------------ALINENGVSYGEQSA-K 961
Query: 643 IADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGY 702
I ++ E+ + +++H H +L+FSQ ML L++ ++ +
Sbjct: 962 IQELMEQIEDKKKH---------------------HKILVFSQFVGMLKLVERALEERSI 1000
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+ + G TK R ++VN FQE + +FL++ + GG+GL LT+AD V ++DP WNP+
Sbjct: 1001 PYSLLTGQTKK--RKEVVNAFQENEHIRVFLISLKAGGMGLNLTQADYVYLLDPWWNPAV 1058
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY----RKQIFKGGLFKTATEHKEQIRYF 818
+NQ++DRAYRIGQ K VV R +T T+EEKI RKQ G L T +Q+
Sbjct: 1059 ENQAIDRAYRIGQDKKVVAVRFITPNTIEEKILELQKRKQELVGDLVHTDVSTLKQL--- 1115
Query: 819 SQQDLRELL 827
S+++L +LL
Sbjct: 1116 SRKELVDLL 1124
>gi|359489054|ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 2
[Vitis vinifera]
Length = 2089
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 270/546 (49%), Gaps = 68/546 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y L ++ L +Q+EG+ WL L GIL DDMGLGKT+Q +A
Sbjct: 1483 YKLSTELKVTLRRYQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVASDIEEHRTS 1542
Query: 354 R------ALVVAPKTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDKGVL 405
+ +L++ P TL+ HW E+ S+ I +Y G+ + LQ + + V+
Sbjct: 1543 KDGAYPPSLIICPSTLVGHWAYEIEKYIDSSVITTLQYVGS--AHDRMSLQGLFEKHNVI 1600
Query: 406 LTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH 465
+T+YD+VR + L +W+Y ILDEGH+IKN ++ ++ ++ + H
Sbjct: 1601 ITSYDVVRKDVDYL------------GQLLWNYCILDEGHIIKNSKSKITSAVKQLKAQH 1648
Query: 466 RIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSA 525
R+I+SGTPIQNN+ +LW+LF+F P LG + F+ Y P+ D ++ G+
Sbjct: 1649 RLILSGTPIQNNILDLWSLFDFLMPGFLGTERQFQATYGKPLQAARDSKCSAKDAEAGAL 1708
Query: 526 VAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEAFL 582
+ L +++ P+ LRR K+EV LS E I+ + L Q +LYE F
Sbjct: 1709 AMEALHKQVMPFLLRRTKDEV-----------LSDLPEKIIQDRYCDLCPVQLKLYEQFS 1757
Query: 583 NSEIV--LSAF-------------DGSPLA------ALTILKKICDHPLLLTKRAAEDVL 621
S + +S+ SP A AL L K+C HPLL+ D L
Sbjct: 1758 GSHVRHEISSIVKRNESTDTGEGNSASPKASSHVFQALQYLLKLCGHPLLVVGEKIPDSL 1817
Query: 622 DGMDSMLNPEDAALAEKL--AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-H 678
+ S P + + +L H + + E+ C I S + + G H
Sbjct: 1818 TTILSEFFPGTSDIMSELHKLHHSPKLIALHEILEE-----CGIGVDASSSEGAVSVGQH 1872
Query: 679 NVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLT 735
VLIF+Q + L++I+ + K +LR+DG+ + R +IV F + LLT
Sbjct: 1873 RVLIFAQHKAFLDIIERDLFHTHMKSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLT 1932
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+ VGGLGL LT AD ++ ++ WNP D+Q++DRA+R+GQ+K V V+RL+ GT+EEK+
Sbjct: 1933 THVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVM 1992
Query: 796 RKQIFK 801
Q FK
Sbjct: 1993 SLQRFK 1998
>gi|328793843|ref|XP_624270.3| PREDICTED: ATP-dependent helicase brm [Apis mellifera]
Length = 2018
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 261/536 (48%), Gaps = 68/536 (12%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLLS 365
+Q +GL WL SL GIL D+MGLGKT+Q + L + + L++ P + LS
Sbjct: 1198 YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLS 1257
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W+ E S + Y G+ R + Q VLLTTY+ V I
Sbjct: 1258 NWVLEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYV------------I 1305
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKELWAL 484
D+ W YMI+DEGH +KN + + L + HR++++GTP+QN L ELWAL
Sbjct: 1306 KDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWAL 1365
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
NF P + F++ + P +K L+ E+ I + + L + ++P+ LRRLK
Sbjct: 1366 LNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI--LIIRRLHKVLRPFLLRRLKK 1423
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--------- 595
EV + L K E I+ ++ Q+ LY+ + ++L+ DGS
Sbjct: 1424 EV--------ESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLT--DGSEKGKQGKGGA 1473
Query: 596 ---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
+ + L+K+C+HP + A+ EK H+
Sbjct: 1474 KALMNTIVQLRKLCNHPFMFQ--------------------AIEEKYCEHVGTQGSGVIT 1513
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
S K + +L KL H VL+F Q +++ ++++ + +G+ +LR+DGTTK
Sbjct: 1514 GPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTK 1573
Query: 713 ASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
A DR ++ F + G +FLL+++ GGLGL L AD VI+ D WNP D Q+ DRA+
Sbjct: 1574 AEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 1633
Query: 772 RIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQIRYF 818
RIGQK +V V RLMT +VEE+I Y+ +++ + G+F + E+ ++
Sbjct: 1634 RIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFL 1689
>gi|357616225|gb|EHJ70080.1| putative helicase [Danaus plexippus]
Length = 872
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 283/558 (50%), Gaps = 64/558 (11%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKT 362
L P+Q GL WL LH QG GIL D+MGLGKT+Q+ FLA L + + L+V P +
Sbjct: 327 LAPYQLVGLNWLAVLHKQGVSGILADEMGLGKTVQVIAFLAHLKETGQARGTHLIVVPAS 386
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV--LQDKGVLLTTYDIVRNNSKSLR 420
L +W EL+ S ++ +Y+G + RQ ++Y L ++LTTY +V
Sbjct: 387 TLDNWSSELSRWCPSLRVSKYYGNPEERRQLRIEYSRGLDQIDIVLTTYTMV-------- 438
Query: 421 GSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKE 480
SS + Y++ DE H++KN STQR +LL+I S HR++++GTP+QNNL E
Sbjct: 439 -SSCPEERKMFRITPMHYVVYDEAHMLKNMSTQRYDNLLKIKSKHRLLLTGTPLQNNLVE 497
Query: 481 LWALFNFCCPELLGDN-----KWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
L +L F P + N F++ + + + + D + + + ++
Sbjct: 498 LMSLLCFVMPHMFSGNTDDLKNLFQKNAKAKTTKKTNGNTDDEVPAFEQSQITQAKRIMK 557
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG-- 593
P+ LRRLK +V + L +K ++ Q++ Y+ + +A DG
Sbjct: 558 PFVLRRLKRDVLQD--------LPQKTNHTELCPMSEKQQRQYKELIAG---FAAKDGTI 606
Query: 594 ------SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD-V 646
S ++ + ++K+ +HPLLL + M + L D EK ++ D +
Sbjct: 607 HATTEQSGISMMMDMRKLANHPLLLRYHYDQHTTRKMAARL-ARDPDYKEKNEQYLFDDL 665
Query: 647 AEKDDFQ-----EQHDNI------------SCKISFILSLLDKLIPEGHNVLIFSQTRKM 689
DFQ +Q+ I S K + S+L +L EGH VLIFSQ M
Sbjct: 666 MCMSDFQIHQLTQQYSCIRQYAVPDTLIEDSGKFQKLDSMLPQLQAEGHRVLIFSQFTMM 725
Query: 690 LNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKAD 749
L++I+ + + Y++LR+DG+T ++R +++ + D+ +FLL+++ GGLG+ LT AD
Sbjct: 726 LDVIEPYLRMRNYRYLRLDGSTAVNERQDLIDQYNTEDIF-VFLLSTKAGGLGINLTAAD 784
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK--- 806
VI+ D +NP D Q+ DR +R+GQ + V +YRL++ GT+EE IY+ K L K
Sbjct: 785 TVIIHDIDFNPYNDKQAEDRCHRMGQTRPVTIYRLLSAGTIEEGIYQVAQEKLNLEKHVT 844
Query: 807 -----TATEHKEQIRYFS 819
+TE K +R S
Sbjct: 845 GADENESTEQKNVVRLLS 862
>gi|407929790|gb|EKG22600.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 831
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 173/570 (30%), Positives = 278/570 (48%), Gaps = 72/570 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++L+ + G I+ D+MGLGKT+Q +
Sbjct: 224 PRVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLVDPKANGCIMADEMGLGKTLQCIALMW 283
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++ ++ P +L+ +W EL L F K + EL
Sbjct: 284 TLLRQSPDAGKPTIQKCVIACPSSLVKNWANELVK-WLGKDAINPFAVDGKASKEELIQQ 342
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + VL+ +Y+ +R L+ + ++ DEGH +K
Sbjct: 343 LRQWSIASGRAVVRPVLIVSYETLRLYVDELKSTPI------------GLLLCDEGHRLK 390
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + +L + R+I+SGTPIQN+L E +AL NF P LG F+++YELPIL
Sbjct: 391 NDESLTFTALNNLNVQKRVILSGTPIQNDLSEYFALLNFANPNYLGTKNDFRKRYELPIL 450
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D D ++++G EL + + +RR N++ S L +K E +V+
Sbjct: 451 RGRDADGTDEDRKLGDERLSELLTLVNKFIIRR-TNDIL-------SKYLPRKYEHVVFC 502
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L QR LY F+ S + G PL A+ ILKK+C+HP D+LD
Sbjct: 503 NLAPFQRDLYNLFIKSPEIQQLLRGKGSQPLKAINILKKLCNHP---------DLLDL-- 551
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
P D +E + D KD D + S +++LD+++ +
Sbjct: 552 ----PGDLPGSE--SCFPDDFVPKDARGRDRD-VKSWYSGKMAVLDRMLARIRQDTNDKI 604
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQV 738
++ S + L++ ++ S+ Y LR+DGT + R K+V+ F + + P +FLL+S+
Sbjct: 605 VLISNYTQTLDVFEKLCRSRSYGCLRLDGTMNVNKRQKLVDKFNDPE-GPEFVFLLSSKA 663
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 664 GGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIGTGTIEEKIFQRQ 723
Query: 799 IFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 724 SHKQSLSSCVVDSAEDVERHFSLDSLRELF 753
>gi|311113008|ref|YP_003984230.1| hypothetical protein HMPREF0733_11339 [Rothia dentocariosa ATCC
17931]
gi|310944502|gb|ADP40796.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931]
Length = 1319
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 274/554 (49%), Gaps = 85/554 (15%)
Query: 276 DSVLEDEGSITLS---GPRSTYMLPGKIG--NMLFPHQREGLRWLWSLHCQGKGGILGDD 330
+ VLE+E S +LS G S LP G +L P+Q EG RWL L GGIL DD
Sbjct: 799 EEVLENEHSDSLSVSSGVFSANHLPSPPGLTAVLRPYQLEGFRWLAFLRQHRLGGILADD 858
Query: 331 MGLGKTMQICGFLAGLF--------HSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIRE 382
MGLGKT+Q+ LA H+ LVVAP +++ +W +E AK+
Sbjct: 859 MGLGKTVQVLALLAQAIAEHEQRADHTEFAP-FLVVAPTSVVGNWAQEAARFVPGAKVVT 917
Query: 383 YFGTCVKTRQYELQYVLQDKGVLLTTYDIVR---------NNSKSLRGSSFISDEAGDDD 433
+ K+ + + ++Q ++LT+Y + R N S AG
Sbjct: 918 ITESTSKSGK-SIAELVQGAHLVLTSYALFRLDEDGYTEFGNHVPENAEKSTSPHAG--- 973
Query: 434 AIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELL 493
W +ILDE +KN T+ K + + ++ I+GTP++NNL ELWAL L
Sbjct: 974 --WGALILDEAQFVKNTKTRAWKVARALNAQVKLAITGTPMENNLMELWALLAIVADGLF 1031
Query: 494 GDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVT 553
+ F++ Y P G D +++ LR R++P LRR K+ V
Sbjct: 1032 PSARMFRDLYARPAESGEDPQVIEK-----------LRRRVRPLMLRRTKDVV------- 1073
Query: 554 SSATLSKKNEMIVWLRLTSCQRQLYEAFLNSE--IVLSAFDGSPLAALTILKKICDHPLL 611
+A L +KN++ V + LT+ R +Y+ L E VL D TI + L
Sbjct: 1074 -AADLPEKNDVRVNVPLTTAHRHIYDMHLQRERQKVLGLLDDMDKNRFTIFQS-----LT 1127
Query: 612 LTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLD 671
L +R A D ++++P++ A VA S K+ +++ L
Sbjct: 1128 LLRRLALDA-----TLIDPDE----------YAGVA------------SAKLEYLVEHLP 1160
Query: 672 KLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPI 731
L+ +GH VL+FSQ L I E + ++G +L +DGTT+ +R +++ DF EG AP+
Sbjct: 1161 SLLGDGHRVLVFSQFTGYLRTIAERLQAEGIDYLYLDGTTR--NRPQVLKDFAEG-AAPV 1217
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
FL++ + GG GL LT+AD ++DP WNP+ + Q+VDR +R+GQ++DV VYRL+ GT+E
Sbjct: 1218 FLISLKAGGFGLNLTEADHCFIMDPWWNPAAEQQAVDRIHRLGQERDVHVYRLVAEGTIE 1277
Query: 792 EKIYRKQIFKGGLF 805
EK+ + K LF
Sbjct: 1278 EKVMDLKASKAALF 1291
>gi|340717205|ref|XP_003397077.1| PREDICTED: ATP-dependent helicase brm-like [Bombus terrestris]
Length = 2009
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 261/536 (48%), Gaps = 68/536 (12%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLLS 365
+Q +GL WL SL GIL D+MGLGKT+Q + L + + L++ P + LS
Sbjct: 1188 YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLS 1247
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W+ E S + Y G+ R + Q VLLTTY+ V I
Sbjct: 1248 NWVLEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYV------------I 1295
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKELWAL 484
D+ W YMI+DEGH +KN + + L + HR++++GTP+QN L ELWAL
Sbjct: 1296 KDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWAL 1355
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
NF P + F++ + P +K L+ E+ I + + L + ++P+ LRRLK
Sbjct: 1356 LNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI--LIIRRLHKVLRPFLLRRLKK 1413
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--------- 595
EV + L K E I+ ++ Q+ LY+ + ++L+ DGS
Sbjct: 1414 EV--------ESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLT--DGSEKGKQGKGGA 1463
Query: 596 ---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
+ + L+K+C+HP + A+ EK H+
Sbjct: 1464 KALMNTIVQLRKLCNHPFMFQ--------------------AIEEKYCEHVGTQGSGVIT 1503
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
S K + +L KL H VL+F Q +++ ++++ + +G+ +LR+DGTTK
Sbjct: 1504 GPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTK 1563
Query: 713 ASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
A DR ++ F + G +FLL+++ GGLGL L AD VI+ D WNP D Q+ DRA+
Sbjct: 1564 AEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 1623
Query: 772 RIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQIRYF 818
RIGQK +V V RLMT +VEE+I Y+ +++ + G+F + E+ ++
Sbjct: 1624 RIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFL 1679
>gi|307204540|gb|EFN83220.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1
[Harpegnathos saltator]
Length = 847
Score = 252 bits (643), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 273/524 (52%), Gaps = 55/524 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA----LVVA 359
L P+Q GL WL +H Q GIL D+MGLGKT+Q+ FL L + LI L+V
Sbjct: 283 LAPYQMVGLNWLAVMHAQNVNGILADEMGLGKTVQVIAFLTYLKEAGLIDEQDGPHLIVV 342
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV---LQDKGVLLTTYDIVRNNS 416
P + + +W EL S K+ +Y+G+ + ++ + + L D VLLTTY ++ +
Sbjct: 343 PSSTIENWWNELERWSPSLKVVQYYGSQDERKEMRMGWRNGDLDDVDVLLTTYSLICSTP 402
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQN 476
+ R + +Y++ DE H++KN S+ R ++L+ I + HRI+++GTP+QN
Sbjct: 403 EERRLFRVMP---------INYVVFDEAHMLKNMSSVRYENLVRINAKHRILLTGTPLQN 453
Query: 477 NLKELWALFNFCCPELLGDNK-----WFKEKYELPI-LRGNDKHALDREKRIGSAVAKEL 530
NL EL +L F P L + F + ++P + D+ +RE+ K
Sbjct: 454 NLLELMSLLIFVMPSLFAGKQADLKSLFSKNSKMPSDKKDKDQPLFEREQ------VKNA 507
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN--SEIVL 588
+E ++P+ LRRLK EV ++ L K + I+ L S Q+ +Y+ + S
Sbjct: 508 KEIMRPFVLRRLKAEVLND--------LPYKKDEIIRCELLSKQQSMYDRLIAQFSAEAN 559
Query: 589 SAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
D + + L+K+ +HPLL+ E+ L + + L E + ++
Sbjct: 560 EITDVNGTGIMMQLRKLANHPLLVRDYYDEEKLTIIANRLAKEPGYKQKNPKYVFEELLW 619
Query: 649 KDDFQ-EQHDNISCKISFI------------LSLLDKLIP----EGHNVLIFSQTRKMLN 691
D+Q Q I ++ L LD+L+P +GH +LIFSQ +L+
Sbjct: 620 ASDYQINQMTRIYKSVAGFGLPQELIPQAGKLKHLDELLPRLKKDGHRILIFSQFTMVLD 679
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+++E + +G F+R+DG+T ++R ++N++ + IFLL+++ GGLG+ LT AD V
Sbjct: 680 ILEEYLTIRGQTFIRLDGSTPVTERQSLINEYTQNSSIFIFLLSTRAGGLGINLTAADTV 739
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
I+ D +NP D Q+ DR +R+GQKK V + RL++ GT+EE +Y
Sbjct: 740 IIHDIDFNPYNDKQAEDRCHRVGQKKPVTIIRLLSKGTIEESMY 783
>gi|293418289|gb|ABY48151.3| Mot1 [Triticum monococcum subsp. aegilopoides]
Length = 2069
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 273/534 (51%), Gaps = 77/534 (14%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-LFHSRLIK-----RALVVAP 360
+Q+EG+ WL L GIL DDMGLGKT+Q +A + SR ++L++ P
Sbjct: 1483 YQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVASDIAESRARNDDKDPKSLIICP 1542
Query: 361 KTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
TL++HW E+ S+ ++ +Y G+ Q+ DK V++T+YDI+R +
Sbjct: 1543 STLVAHWEYEVEKYIDSSIMKPLQYIGSSQDRMTLRAQF---DKFNVIITSYDIIRKDID 1599
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
L + IW+Y +LDEGH+IKN ++ ++ ++ + HR+I+SGTPIQNN
Sbjct: 1600 FL------------ESVIWNYCVLDEGHIIKNSRSKITSAVKQLKAQHRLILSGTPIQNN 1647
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
+ ELW+LF+F P LG K F+ Y P++ D ++ G + L +++ P+
Sbjct: 1648 VLELWSLFDFLMPGFLGTEKQFQSTYGKPLIAAKDSKCSAKDAEAGILAMEALHKQVMPF 1707
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR---LTSCQRQLYEAFLNSEI------VL 588
LRR K+EV LS E I+ R L+ Q +LY+ F +S + ++
Sbjct: 1708 LLRRTKDEV-----------LSDLPEKIIQDRHCNLSHLQLKLYDKFSSSNVKEEISTIV 1756
Query: 589 SAFDGSP-----------LAALTILKKICDHPLLLTKRAAEDVL------DGMDSMLNPE 631
A + P AL L K+C HPLL+ + + + GM +
Sbjct: 1757 KADESEPSTSQPKATRHVFQALQYLLKLCSHPLLVIGESPPEYIVEHLKEIGMGTGDELH 1816
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-HNVLIFSQTRKML 690
+ + KL VA ++ QE C I +S D G H VLIF+Q + L
Sbjct: 1817 ELHHSPKL------VALQEILQE------CGIGSEISSPDASAAVGQHRVLIFAQHKAFL 1864
Query: 691 NLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
++I++ + + +LR+DG+ + R +IV F + LLT+ VGGLGL LT
Sbjct: 1865 DIIEKDLFQSHMRSVTYLRLDGSVQTDKRFEIVKTFNSDPTIDVLLLTTHVGGLGLNLTS 1924
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
AD ++ ++ WNP D Q++DRA+R+GQ+K V V+RL+ GT+EEK+ Q FK
Sbjct: 1925 ADTLVFMEHDWNPMKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFK 1978
>gi|449299733|gb|EMC95746.1| hypothetical protein BAUCODRAFT_501788 [Baudoinia compniacensis
UAMH 10762]
Length = 813
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 283/569 (49%), Gaps = 70/569 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ +I +L PHQ EG+++L+ +G I+ D+MGLGKT+Q +
Sbjct: 207 PKVPVVIDPRIAKVLRPHQVEGVKFLYRCTTGLIDDNAQGCIMADEMGLGKTLQCITLMW 266
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++ ++ P +L+ +W EL L F K + EL
Sbjct: 267 TLLKQSPDAGKGTIQKCVIACPSSLVRNWANELVK-WLGQDAINPFAVDGKASKEELTMQ 325
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
++ + VL+ +Y+ +R + L G++ I M+ DEGH +K
Sbjct: 326 MRQWAAATGRAVIRPVLIVSYETLRLYVQEL-GNTPIG-----------LMLCDEGHRLK 373
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q ++L + R+I+SGTPIQN+L E +AL NF P LG + F+++YE+PIL
Sbjct: 374 NGESQTFEALNALNVKKRVILSGTPIQNDLSEYFALLNFANPGYLGTRQDFRKQYEIPIL 433
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A D + + G+ EL ++ + +RR N++ S L K E +V+
Sbjct: 434 RGRDAGASDHDMQRGNERLSELLVKVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 485
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + S G PL A+ +LKK+C+HP LL D L G D
Sbjct: 486 NLAPFQLDLYNYFVKSPEIQSLLRGKGSQPLKAIGLLKKLCNHPDLLN---LPDDLPGCD 542
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-----V 680
+ E E D + ++ ++ S + +LD+++ + +
Sbjct: 543 ELFPKE---------------YETKDNRGRNREVNPSYSGKMQVLDRMLRSIRHETTDKI 587
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
++ S + L++ + S Y LR+DGT S R K+V+ F + + +FLL+S+ G
Sbjct: 588 VLISNYTQTLDVFERLCRSNSYGCLRLDGTMNVSKRQKLVDKFNDPEGKEFVFLLSSKAG 647
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G GL L A+R+++ DP WNP++D Q++ R +R GQKKD VYR + GT+EEK++++Q
Sbjct: 648 GCGLNLIGANRLVLFDPDWNPASDQQALARVWRDGQKKDCFVYRFIATGTIEEKVFQRQS 707
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+F+ LREL
Sbjct: 708 HKQSLSSCVVDSAEDVERHFTLDSLRELF 736
>gi|296090211|emb|CBI40030.3| unnamed protein product [Vitis vinifera]
Length = 1884
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 270/546 (49%), Gaps = 68/546 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y L ++ L +Q+EG+ WL L GIL DDMGLGKT+Q +A
Sbjct: 1278 YKLSTELKVTLRRYQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVASDIEEHRTS 1337
Query: 354 R------ALVVAPKTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDKGVL 405
+ +L++ P TL+ HW E+ S+ I +Y G+ + LQ + + V+
Sbjct: 1338 KDGAYPPSLIICPSTLVGHWAYEIEKYIDSSVITTLQYVGSA--HDRMSLQGLFEKHNVI 1395
Query: 406 LTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH 465
+T+YD+VR + L +W+Y ILDEGH+IKN ++ ++ ++ + H
Sbjct: 1396 ITSYDVVRKDVDYL------------GQLLWNYCILDEGHIIKNSKSKITSAVKQLKAQH 1443
Query: 466 RIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSA 525
R+I+SGTPIQNN+ +LW+LF+F P LG + F+ Y P+ D ++ G+
Sbjct: 1444 RLILSGTPIQNNILDLWSLFDFLMPGFLGTERQFQATYGKPLQAARDSKCSAKDAEAGAL 1503
Query: 526 VAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEAFL 582
+ L +++ P+ LRR K+EV LS E I+ + L Q +LYE F
Sbjct: 1504 AMEALHKQVMPFLLRRTKDEV-----------LSDLPEKIIQDRYCDLCPVQLKLYEQFS 1552
Query: 583 NSEIV--LSAF-------------DGSPLA------ALTILKKICDHPLLLTKRAAEDVL 621
S + +S+ SP A AL L K+C HPLL+ D L
Sbjct: 1553 GSHVRHEISSIVKRNESTDTGEGNSASPKASSHVFQALQYLLKLCGHPLLVVGEKIPDSL 1612
Query: 622 DGMDSMLNPEDAALAEKL--AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-H 678
+ S P + + +L H + + E+ C I S + + G H
Sbjct: 1613 TTILSEFFPGTSDIMSELHKLHHSPKLIALHEILEE-----CGIGVDASSSEGAVSVGQH 1667
Query: 679 NVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLT 735
VLIF+Q + L++I+ + K +LR+DG+ + R +IV F + LLT
Sbjct: 1668 RVLIFAQHKAFLDIIERDLFHTHMKSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLT 1727
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
+ VGGLGL LT AD ++ ++ WNP D+Q++DRA+R+GQ+K V V+RL+ GT+EEK+
Sbjct: 1728 THVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVM 1787
Query: 796 RKQIFK 801
Q FK
Sbjct: 1788 SLQRFK 1793
>gi|302803051|ref|XP_002983279.1| hypothetical protein SELMODRAFT_422676 [Selaginella moellendorffii]
gi|300148964|gb|EFJ15621.1| hypothetical protein SELMODRAFT_422676 [Selaginella moellendorffii]
Length = 3497
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 169/544 (31%), Positives = 271/544 (49%), Gaps = 80/544 (14%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVA 359
G L +Q GLRWL SL+ G+L D+MGLGKT+Q+ + L ++ + LVV
Sbjct: 1148 GGTLREYQMNGLRWLVSLYNNHLNGMLADEMGLGKTVQVIALICYLIEAKHDRGPFLVVV 1207
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSKS 418
P ++L +W+ E+T + Y GT + R+ ++++Q + +L+TTY+ + N +
Sbjct: 1208 PSSVLPNWMSEITRWAPNVIKLAYTGTPDERRRLFKEHIVQQQFNILVTTYEYLMNKNDR 1267
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNL 478
+ S W Y+I+DEGH IKN S + L S +R++++GTPIQNNL
Sbjct: 1268 PKLSKIR----------WHYIIIDEGHRIKNASCKLNAELKHYQSNNRLLLTGTPIQNNL 1317
Query: 479 KELWALFNFCCPELLGDN----KWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
ELWAL NF P + + +WF + +E G+ + L E+ + + L + +
Sbjct: 1318 DELWALLNFLLPSIFNSSEDFAQWFNKPFESVADNGDTEALLTEEENL--LIINRLHQVL 1375
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI------VL 588
+P+ LRRLK++V +E L +K E RL C+ Y+ L + +
Sbjct: 1376 RPFVLRRLKHKVEYE--------LPEKIE-----RLVRCEASAYQRLLMKRVKEKMGGIG 1422
Query: 589 SAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
A S + L+ IC+HP L S ++ E+A L H
Sbjct: 1423 HAKVRSVQNTVMELRNICNHPYL--------------SHVHTEEAESL--LPSHYLPTV- 1465
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
++ L +LD+++P+ H VL+FS ++LN++++ + KGYK+
Sbjct: 1466 ------------IRLCGKLEMLDRILPKLKKSNHRVLLFSTMTRLLNVLEDYLTWKGYKY 1513
Query: 705 LRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG T S+R +++ F D A +FLL+ + GG+G+ L AD VI+ D WNP D
Sbjct: 1514 LRLDGHTMGSERGSLIDRFNAPDSDAFLFLLSIRAGGIGVNLQAADTVIIFDTDWNPQVD 1573
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI---------YRKQIFKGGLFKTATEHKEQ 814
Q+ RA+RIGQK+DV+V RL T T+EE++ Q G F T +++
Sbjct: 1574 LQAQARAHRIGQKRDVLVLRLETVNTIEEQVRASAEHKLGVANQSITAGFFDNNTSAEDR 1633
Query: 815 IRYF 818
Y
Sbjct: 1634 REYL 1637
>gi|219112733|ref|XP_002178118.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411003|gb|EEC50932.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 995
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 264/517 (51%), Gaps = 80/517 (15%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-IKRALVV 358
+G L +Q GL+WL SL+ GIL D+MGLGKT+Q +A L + + LV+
Sbjct: 240 VGGELKEYQLLGLQWLVSLYNNKLNGILADEMGLGKTIQAISLIAYLMEFKQNLGPYLVI 299
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTC-VKTRQYELQYVLQDKGVLLTTYDIVRNNSK 417
P + LS+W E +A++ Y GT ++ Y Q VLLTTY+ + + K
Sbjct: 300 VPLSTLSNWQNEFLKWCPAARLICYKGTPGLRKEIYRDQVRTGHFNVLLTTYEYIIKDKK 359
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQN 476
LR W Y I+DEGH +KN ++ A +L + + +R++++GTP+ N
Sbjct: 360 FLRKID------------WQYAIVDEGHRMKNAQSKFAVTLGTQYSTRYRVLLTGTPLMN 407
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILR---------GNDKHALDREKRIGSAVA 527
+L ELW+L NF P + + F + + P + G+D L E+RI V
Sbjct: 408 DLSELWSLLNFLLPTIFNSVETFDQWFSRPFEQFGGGSNTDEGDD--LLSNEERI--LVI 463
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
L E ++P+ LRR+K+EV + L +K E ++ L+S Q++LY+ +
Sbjct: 464 HRLHELLRPFMLRRVKSEVLDQ--------LPEKVEKVLRCELSSWQKELYKQISKKAVA 515
Query: 588 LSAFDGSPLAA--------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKL 639
+A G+ A + L+K+C+HP L + PE
Sbjct: 516 DTALMGTDTQAPSRGLNNIVMQLRKVCNHPYLFS----------------PE-------- 551
Query: 640 AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGS 699
HI D+ + S K++ + +L KL GH VL+F+Q ++ ++++
Sbjct: 552 GYHINDIIVRS---------SGKMALLDQMLPKLRAAGHRVLMFTQMTAVMTIMEDYFAL 602
Query: 700 KGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPA 757
+GYK LR+DG+T A +R K + F D +P +FLL+++ GGLGL LT AD VI+ D
Sbjct: 603 RGYKSLRLDGSTPAEEREKRMYKFNAPD-SPYFVFLLSTRAGGLGLNLTSADTVIIFDSD 661
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI 794
WNP D Q+ DRA+RIGQ+ DV V+RL+T VEEKI
Sbjct: 662 WNPMMDLQAQDRAHRIGQRSDVSVFRLITYSPVEEKI 698
>gi|293417053|gb|ACU00616.1| Mot1 protein [Triticum monococcum subsp. monococcum]
Length = 2069
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 273/534 (51%), Gaps = 77/534 (14%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-LFHSRLIK-----RALVVAP 360
+Q+EG+ WL L GIL DDMGLGKT+Q +A + SR ++L++ P
Sbjct: 1483 YQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVASDIAESRARNDDKDPKSLIICP 1542
Query: 361 KTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
TL++HW E+ S+ ++ +Y G+ Q+ DK V++T+YDI+R +
Sbjct: 1543 STLVAHWEYEVEKYIDSSIMKPLQYIGSSQDRMTLRAQF---DKFNVIITSYDIIRKDID 1599
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
L + IW+Y +LDEGH+IKN ++ ++ ++ + HR+I+SGTPIQNN
Sbjct: 1600 FL------------ESVIWNYCVLDEGHIIKNSRSKITSAVKQLKAQHRLILSGTPIQNN 1647
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
+ ELW+LF+F P LG K F+ Y P++ D ++ G + L +++ P+
Sbjct: 1648 VLELWSLFDFLMPGFLGTEKQFQSTYGKPLIAAKDSKCSAKDAEAGILAMEALHKQVMPF 1707
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR---LTSCQRQLYEAFLNSEI------VL 588
LRR K+EV LS E I+ R L+ Q +LY+ F +S + ++
Sbjct: 1708 LLRRTKDEV-----------LSDLPEKIIQDRHCNLSHLQLKLYDKFSSSNVKEEISTIV 1756
Query: 589 SAFDGSP-----------LAALTILKKICDHPLLLTKRAAEDVL------DGMDSMLNPE 631
A + P AL L K+C HPLL+ + + + GM +
Sbjct: 1757 KADESEPSTSQPKATRHVFQALQYLLKLCSHPLLVIGESPPEYIVEHLKEIGMGTGDELH 1816
Query: 632 DAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-HNVLIFSQTRKML 690
+ + KL VA ++ QE C I +S D G H VLIF+Q + L
Sbjct: 1817 ELHHSPKL------VALQEILQE------CGIGSEISSPDASAAVGQHRVLIFAQHKAFL 1864
Query: 691 NLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTK 747
++I++ + + +LR+DG+ + R +IV F + LLT+ VGGLGL LT
Sbjct: 1865 DIIEKDLFQSHMRSVTYLRLDGSVQTDKRFEIVKTFNSDPTIDVLLLTTHVGGLGLNLTS 1924
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
AD ++ ++ WNP D Q++DRA+R+GQ+K V V+RL+ GT+EEK+ Q FK
Sbjct: 1925 ADTLVFMEHDWNPMKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFK 1978
>gi|50290001|ref|XP_447432.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526742|emb|CAG60369.1| unnamed protein product [Candida glabrata]
Length = 942
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 272/533 (51%), Gaps = 63/533 (11%)
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKEL------- 371
G I+ D+MGLGKT+Q + L RLI + ++V P +L+++W EL
Sbjct: 374 GCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLISKCIIVCPSSLVNNWANELVKWLGPN 433
Query: 372 --TAVGLSAKIREYFGTCVKTRQYELQYVLQDKG------VLLTTYDIVRNNSKSLRGSS 423
+ + + K + + + ++ Q +G VL+ +YD +R N K L+ +
Sbjct: 434 TLSPLAVDGK-KSSLASGATSVAEAIKNWAQAQGRNIVKPVLIISYDTLRRNVKQLQNT- 491
Query: 424 FISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWA 483
E G ++ DEGH +KN + +L I R+I+SGTPIQN+L E +A
Sbjct: 492 ----EVG-------LLLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFA 540
Query: 484 LFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLK 543
L NF P LLG F+ +E+PILR D A D + + G + L + + +RR
Sbjct: 541 LLNFSNPGLLGTRNEFRRNFEIPILRSRDADATDNDVKSGEQKLQLLSNIVSKFIIRR-T 599
Query: 544 NEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG----SPLAAL 599
N++ S L K E ++++ LT Q+Q+Y + S + G PL A+
Sbjct: 600 NDIL-------SKYLPCKYEHVIFVNLTPFQKQVYNMLIKSRDIKKVVKGDGGSQPLKAI 652
Query: 600 TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNI 659
+LKK+C+HP L+ ++ LD + + P+D ++ + D Q Q
Sbjct: 653 GVLKKLCNHPDLI---KLDEELDNYNDLDIPDDYSIP---------TGKSRDVQTQ---F 697
Query: 660 SCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVK 718
S K + + L K+ E + +++ S + L+LI+ ++ Y +R+DGT + R K
Sbjct: 698 SGKFAILERFLHKIKTESDDKIVLISNYTQTLDLIERMCRNRHYASVRLDGTMSINKRQK 757
Query: 719 IVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKK 777
+V+ F + + IFLL+S+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKK
Sbjct: 758 LVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKK 817
Query: 778 DVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
D +YR ++ GT+EEKIY++Q K L + KE + R FS +LR+L
Sbjct: 818 DCFIYRFISTGTIEEKIYQRQSMKMSLSSCVVDAKEDVERLFSVDNLRQLFQF 870
>gi|340520704|gb|EGR50940.1| hypothetical protein TRIREDRAFT_57935 [Trichoderma reesei QM6a]
Length = 1433
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 167/523 (31%), Positives = 276/523 (52%), Gaps = 79/523 (15%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 552 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEQKQQSGPYLVI 611
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
P + L++W E S Y G TR+ + + + Q + VLLTTY+ +
Sbjct: 612 VPLSTLTNWNLEFEKWAPSVARVVYKGPP-NTRKLQQEKIRQGRFQVLLTTYEYI----- 665
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH-RIIISGTPIQN 476
I D W +MI+DEGH +KN ++ + ++ + + R+I++GTP+QN
Sbjct: 666 -------IKDRPILSKIKWFHMIIDEGHRMKNTQSKLSATIQQYYTTRFRLILTGTPLQN 718
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERI 534
NL ELWA+ NF P + K F E + P G DK L E++I V + L + +
Sbjct: 719 NLSELWAMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVL 776
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDG 593
+P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + ++++V+S G
Sbjct: 777 RPFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQSKLYKQMVTHNKLVVSDGKG 828
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
A + L+K+C+HP V D +++++NP ++I+
Sbjct: 829 GKTGARGLSNMIMQLRKLCNHPF---------VFDIVENVMNP----------LNIS--- 866
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++++++ + + YK
Sbjct: 867 ---------NDLLWRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDYLRYRNYK 917
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPAW 758
+LR+DGTTK+ +R ++ DF AP +FLL+++ GGLGL L AD VI+ D W
Sbjct: 918 YLRLDGTTKSDERSDLLRDFN----APNSEYFLFLLSTRAGGLGLNLQTADTVIIYDSDW 973
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
NP D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 974 NPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFK 1016
>gi|421735723|ref|ZP_16174621.1| helicase, partial [Bifidobacterium bifidum IPLA 20015]
gi|407296989|gb|EKF16473.1| helicase, partial [Bifidobacterium bifidum IPLA 20015]
Length = 1296
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 274/542 (50%), Gaps = 75/542 (13%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSR 350
STY +P + ++L P+Q EG RWL ++ +G GGIL D+MGLGK++Q+ L SR
Sbjct: 760 STYRVPAALASVLRPYQAEGFRWLNAVCDKGFGGILADEMGLGKSVQLLSLLLARHKESR 819
Query: 351 LIKRA-LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQY--ELQYVLQDKGV--- 404
+R L+V P +L+ +W+ E+ ++ GT + R ++ QD GV
Sbjct: 820 AERRPNLIVCPASLVYNWVAEVAKHTPELRVEAIAGTKPERRAMLDGVRAAQQDTGVSPT 879
Query: 405 -------------------LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGH 445
L+T+YD++R + G F M LDE
Sbjct: 880 RESARPASAAAASDDVPDVLVTSYDLLRRDIDDYAGLEFYC------------MTLDEAQ 927
Query: 446 LIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYEL 505
IKN +T+ +K++ + + HR ++GTPI+N L ELW++F+F P +LG F+E++E+
Sbjct: 928 YIKNAATKVSKAVRSVTAVHRFALTGTPIENRLSELWSIFDFLMPGMLGSYAHFRERFEM 987
Query: 506 PILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMI 565
P+L G++ K+L+ + P+ LRRLK++V + L K E +
Sbjct: 988 PVLSGDET------------AQKKLQSFVGPFILRRLKSQVLKD--------LPDKIENV 1027
Query: 566 VWLRLTSCQRQLYEAFLNS--EIVLSA----FDGSP---LAALTILKKICDHPLLLTKRA 616
+ ++L QR+LY A ++LS F+ LA LT L+++C P L+ + A
Sbjct: 1028 ITVQLQGEQRKLYAALEQQLRSVILSQRPADFNTGKIQILAQLTRLRQVCCDPRLIYENA 1087
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
DG S L+ + A+ + ++ + + S K+ I+ L+D
Sbjct: 1088 -----DGHASALSAGVQSAAKDPQQSVKQPVKQS--KARKTVSSAKLDAIIELVDSCRDA 1140
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
G +LIFSQ L+LI + + + G ++ I G T R+++V+ F D P+FL++
Sbjct: 1141 GRKMLIFSQFTSYLDLIAQRLRADGVEYDMITGATPKKRRLELVDRFN-ADATPVFLISL 1199
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+ G GL LT A V+ DP WN + +Q+ DRA+RIGQ +DV VY+++ T+EE+I
Sbjct: 1200 KAGNTGLNLTGACVVVHADPWWNAAAQDQATDRAHRIGQTQDVNVYQIVAKDTIEERILN 1259
Query: 797 KQ 798
Q
Sbjct: 1260 LQ 1261
>gi|432960858|ref|XP_004086500.1| PREDICTED: probable global transcription activator SNF2L2-like
[Oryzias latipes]
Length = 1581
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 174/545 (31%), Positives = 269/545 (49%), Gaps = 71/545 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALVV 358
I ML +Q +GL W+ SL+ GIL D+MGLGKT+Q + L H RL L++
Sbjct: 734 INGMLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLII 793
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+W+ EL S Y GT R Q VLLTTY+ +
Sbjct: 794 VPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVPQLRSGKFNVLLTTYEYI------ 847
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D+ W YMI+DEGH +KN + + L + R++++GTP+QN
Sbjct: 848 ------IKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNK 901
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P ++ L+ E+ I + + L + ++P+
Sbjct: 902 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETI--LIIRRLHKVLRPF 959
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV + L +K E ++ +++ Q+ LY + I+L+ DGS
Sbjct: 960 LLRRLKKEV--------ESQLPEKVEYVIKCDMSAIQKVLYR-HMQKGILLT--DGSEKD 1008
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ + LKKIC+HP M + + AE L
Sbjct: 1009 KKGKGGAKTLMNTIMQLKKICNHPY----------------MFQHIEESFAEHLGYPNGI 1052
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
++ D ++ S K + +L KL GH VL+F Q ++ ++++ G + + +L
Sbjct: 1053 ISGPDLYR-----ASGKFELLDRILPKLHATGHRVLLFCQMTTLMTIMEDYFGYRNFLYL 1107
Query: 706 RIDGTTKASDRVKIVNDF-QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
R+DGTTK+ DR ++ F +EG IFLL+++ GGLGL L AD V++ D WNP D
Sbjct: 1108 RLDGTTKSEDRAALLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDL 1167
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQI 815
Q+ DRA+RIGQ+ +V V RL + +VEEKI Y+ +++ + G+F + E+
Sbjct: 1168 QAQDRAHRIGQQNEVRVLRLCSVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHER- 1226
Query: 816 RYFSQ 820
R F Q
Sbjct: 1227 RAFLQ 1231
>gi|225681829|gb|EEH20113.1| DNA repair and recombination protein RAD26 [Paracoccidioides
brasiliensis Pb03]
Length = 1000
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 279/548 (50%), Gaps = 54/548 (9%)
Query: 300 IGNMLFPHQREGLRWLWSL-----HCQGKGGILGDDMGLGKTMQICGFLAGLFHSR---- 350
+G L HQREG+R+L+ G+G IL D+MGLGKT+Q + L
Sbjct: 327 LGKHLREHQREGVRFLYECVMGMRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYE 386
Query: 351 ---LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLT 407
+IK+AL+V P TL+ +W KE + +I + +TR + + Q V++
Sbjct: 387 APPVIKKALIVCPVTLIDNWKKEFRKWLGNERIGVFVADAKRTRLTDFT-MGQSYSVMII 445
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
Y+ +R + L S I D +I DEGH ++ + A+++ + ++ R+
Sbjct: 446 GYERLRTVQEELSKGSGI-----------DIVIADEGHRMRTVQNKSAQAIQTLNTSKRV 494
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
I+SGTPIQN+L E +A+ +F P +LG K F +++E PI++ AL R+ G A +
Sbjct: 495 ILSGTPIQNDLTEFFAMVDFVNPGILGTFKMFMKQFEGPIVKSQQPGALKRDIEKGKARS 554
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
+EL + LRR + + S L K E +++ TS Q +Y L+S +
Sbjct: 555 EELASLTSLFILRRTADLL--------SNYLPPKTEYVLFCNPTSSQANIYRHVLSSPVF 606
Query: 588 LSAFDGS--PLAALTILKKICDHPLLLTKRAA-EDVLDGMDSMLNPEDAALAEKLAMHIA 644
A S L +TILKK+C+ P LL +++ ED + S++ A+L + +
Sbjct: 607 QCALGNSDSALQLITILKKLCNSPSLLNPKSSDEDSTSTLSSLV----ASLPSSITRRLT 662
Query: 645 DVAEKDDFQEQHDNISCKISFILSLLDKLI-PEGHNVLIFSQTRKMLNLIQESIGSKGYK 703
+ S KI + LL + V++ S L+L+ + + S
Sbjct: 663 PAS------------SGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDLLGKLLTSLSLP 710
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAPIF--LLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
FLR+DG+T A+ R +V+DF +F LL+++ GG GL L A R+++ D WNP+
Sbjct: 711 FLRLDGSTPAAKRQALVDDFNRSSPTSVFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPA 770
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQ 821
TD Q++ R +R GQK+ +YR + G +EEKI+++Q+ K GL + + K + FS++
Sbjct: 771 TDMQAMARIHRDGQKRHCRIYRFLLKGALEEKIWQRQVTKIGLADSVMDQKSGVLQFSRE 830
Query: 822 DLRELLSL 829
+LR+L L
Sbjct: 831 ELRDLFRL 838
>gi|340905259|gb|EGS17627.1| WD40 repeat-containing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 2313
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 273/520 (52%), Gaps = 73/520 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 1359 VGGTLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQNGPYLVI 1418
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
P + L++W E S Y G R+ + + + Q K VLLTTY+ +
Sbjct: 1419 VPLSTLTNWNLEFEKWAPSVTKVVYKGPP-NARKMQQEKIRQGKFQVLLTTYEYI----- 1472
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH-RIIISGTPIQN 476
I D W +MI+DEGH +KN +++ + ++ + + R+I++GTP+QN
Sbjct: 1473 -------IKDRPLLSKIKWFHMIIDEGHRMKNTNSKLSATIQQYYTTRFRLILTGTPLQN 1525
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERI 534
NL ELWA+ NF P + K F E + P G DK L E++I V + L + +
Sbjct: 1526 NLAELWAMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVL 1583
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDG 593
+P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + + +I++S G
Sbjct: 1584 RPFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQARLYKQMVTHQKIIVSDGKG 1635
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
A + L+K+C+HP V D +++ +NP++ +
Sbjct: 1636 GKTGARGLSNMIMQLRKLCNHPF---------VFDEVENQMNPQNIS------------- 1673
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++++++ + +G
Sbjct: 1674 ---------NDLLWRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDYLRYRGLH 1724
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+LR+DGTTK+ DR +++ F D +P +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 1725 YLRLDGTTKSEDRSELLKLFNAPD-SPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPH 1783
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL+T +VEEKI + FK
Sbjct: 1784 QDLQAQDRAHRIGQKNEVRILRLITSNSVEEKILERARFK 1823
>gi|302883714|ref|XP_003040756.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4]
gi|256721646|gb|EEU35043.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4]
Length = 805
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 283/568 (49%), Gaps = 68/568 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ K+ +L PHQ EG+++++ C + G I+ D+MGLGKT+Q
Sbjct: 202 PRVPVVIDPKLAKILRPHQVEGVKFMY--RCVTGMIDEKANGCIMADEMGLGKTLQCISL 259
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
+ L I++A+VV P +L+ +W EL L A F K + EL
Sbjct: 260 MWTLLKQSPEAGKSTIQKAIVVCPASLVKNWANELVK-WLGANAIHPFAIDGKASKEELT 318
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N + L+ + + DEGH
Sbjct: 319 RQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI------------GLLFCDEGHR 366
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN + +L + R+I++GTPIQN+L E ++L +F P LLG + F++++E+P
Sbjct: 367 LKNGDSNTFNALNSLNVTRRVILTGTPIQNDLTEYFSLTSFANPNLLGTRQEFRKRFEIP 426
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A + +++ G EL + + +RR N++ S L K E +V
Sbjct: 427 ILRGRDADASEADRKKGDECTGELLSVVNKFLIRR-TNDIL-------SKYLPVKYEHVV 478
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G
Sbjct: 479 FCNLAPFQFDLYNYFIKSPDIQALLRGKGSQPLKAINILKKLCNHPDLLN---LSDDLPG 535
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLI 682
+ PED E +E S K++ + +L ++ + ++ +++
Sbjct: 536 SEGCC-PEDFVPKESRGRD----------REVKSWYSGKMAVLDRMLARIRQDTNDKIVL 584
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQE--GDVAPIFLLTSQVGG 740
S L+L + S+ Y LR+DGT + R K+V+ F + GD +FLL+S+ GG
Sbjct: 585 ISNYTSTLDLFERLCRSRQYGCLRLDGTMNVNKRQKLVDRFNDPNGDEF-VFLLSSKAGG 643
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 644 CGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSH 703
Query: 801 KGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 704 KQSLSSCVVDSAEDVERHFSLDSLRELF 731
>gi|354546825|emb|CCE43557.1| hypothetical protein CPAR2_212010 [Candida parapsilosis]
Length = 1630
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 274/542 (50%), Gaps = 80/542 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL GIL D+MGLGKT+Q L L + I LV+
Sbjct: 756 VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLIEVKKIPGPFLVI 815
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E + K Y GT + + + + +LLTT++ V
Sbjct: 816 VPLSTVTNWNLEFEKWAPTVKKITYKGTPNQRKSLQHDIKTGNFQILLTTFEYV------ 869
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLL-EIPSAHRIIISGTPIQNN 477
I D+ W +MI+DEGH +KN +++ +++L S +R+I++GTP+QNN
Sbjct: 870 ------IKDKGLLGRVKWVHMIIDEGHRMKNSNSKLSETLTTNYHSDYRLILTGTPLQNN 923
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L E+ + V + L + ++
Sbjct: 924 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETL--LVIRRLHKVLR 981
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E D L K E +V +++S Q +LY+ L + +
Sbjct: 982 PFLLRRLKKDV--EKD------LPNKVEKVVKCKMSSLQSKLYQQMLRFNALYAGDPNDE 1033
Query: 596 LAALTI---------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
A + I LKKIC+HP V + +++ +NP
Sbjct: 1034 TAVVPIKNANNQIMQLKKICNHPF---------VYEDVENFINP---------------T 1069
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
AE +D + +++ LLDK++P+ GH VLIF Q ++++++++ + +G
Sbjct: 1070 AENND-------LIWRVAGKFELLDKVLPKFKETGHKVLIFFQMTQVMDIMEDFLRLRGM 1122
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
K +R+DG TKA DR +++ F D FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 1123 KHMRLDGGTKADDRTELLKLFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPH 1182
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHK 812
D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +
Sbjct: 1183 QDLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHAKLEIDGKVIQAGKFDNKSTAE 1242
Query: 813 EQ 814
EQ
Sbjct: 1243 EQ 1244
>gi|20197603|gb|AAD29835.2| putative SNF2 subfamily transcription regulator [Arabidopsis
thaliana]
Length = 3571
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 172/541 (31%), Positives = 266/541 (49%), Gaps = 75/541 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GLRWL SL+ GIL D+MGLGKT+Q+ + L ++ + LVV
Sbjct: 750 VGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVV 809
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQ-YELQYVLQDKGVLLTTYDIVRNNSK 417
P ++L W E+ S Y GT + R+ ++ Q V Q VLLTTY+ + N
Sbjct: 810 VPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHD 869
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
+ S W Y+I+DEGH IKN S + L S+HR++++GTP+QNN
Sbjct: 870 RPKLSKIH----------WHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNN 919
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L+ELWAL NF P + ++ F + + P + AL E+ + L + ++P+
Sbjct: 920 LEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSALLSEEE-NLLIINRLHQVLRPF 978
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI------VLSAF 591
LRRLK++V +E L +K E RL C+ Y+ L + + +A
Sbjct: 979 VLRRLKHKVENE--------LPEKIE-----RLIRCEASAYQKLLMKRVEDNLGSIGNAK 1025
Query: 592 DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
+ ++ L+ IC+HP L++ +E+V + + P L KL M
Sbjct: 1026 SRAVHNSVMELRNICNHP-YLSQLHSEEVNNIIPKHFLPPIVRLCGKLEM---------- 1074
Query: 652 FQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKFLRI 707
LD+++P+ H VL FS ++L+++++ + KGYK+LR+
Sbjct: 1075 ------------------LDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRL 1116
Query: 708 DGTTKASDRVKIVNDF-QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
DG T DR +++ F + G IFLL+ + GG+G+ L AD VI+ D WNP D Q+
Sbjct: 1117 DGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQA 1176
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKI---------YRKQIFKGGLFKTATEHKEQIRY 817
RA+RIGQKKDV+V R T +VEE++ Q G F T +++ Y
Sbjct: 1177 QARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEY 1236
Query: 818 F 818
Sbjct: 1237 L 1237
>gi|317138645|ref|XP_001817051.2| chromatin structure-remodeling complex subunit snf2 [Aspergillus
oryzae RIB40]
Length = 1422
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 265/518 (51%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + + + LV+
Sbjct: 539 VGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEKKKNNGPFLVI 598
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + Q + VLLTTY+ +
Sbjct: 599 VPLSTLTNWNLEFEKWAPSVARVVYKGPPNARKQQQQQIRWGNFQVLLTTYEYI------ 652
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W++MI+DEGH +KN ++ + +L + S +R+I++GTP+QNN
Sbjct: 653 ------IKDRPILSKVKWNHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNN 706
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 707 LPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQL--LVIRRLHKVLR 764
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ R ++ Q +LY+ + ++++ +S G
Sbjct: 765 PFLLRRLKKDV--EKD------LPDKQERVIKCRFSALQAKLYKQLVTHNKMAVSDGKGG 816
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP
Sbjct: 817 KTGMRGLSNMLMQLRKLCNHPF---------VFEPVEDQMNPGRGT-------------- 853
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + S LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 854 --------NDLLWRTSGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKY 905
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ F E FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 906 LRLDGSTKSDDRSDLLKLFNAENSEYFCFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 965
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 966 LQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFK 1003
>gi|367002638|ref|XP_003686053.1| hypothetical protein TPHA_0F01340 [Tetrapisispora phaffii CBS 4417]
gi|357524353|emb|CCE63619.1| hypothetical protein TPHA_0F01340 [Tetrapisispora phaffii CBS 4417]
Length = 1420
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 273/549 (49%), Gaps = 73/549 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LIKRALVV 358
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + LF + LV+
Sbjct: 468 VGGTLKEYQLRGLEWMVSLYNNNLNGILADEMGLGKTIQSISLITYLFEVKNETGPFLVI 527
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S K Y GT + R + Q + D V+LTTY+ + +
Sbjct: 528 VPLSTITNWTLEFEKWAPSLKTIIYKGTPNQRRTLQGQIRMNDFDVVLTTYEYIIKDRNL 587
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
L A D W +MI+DEGH +KN ++ + ++ + +R+I++GTP+QNN
Sbjct: 588 L---------AKKD---WAHMIIDEGHRMKNAQSKLSYTIQHYYRTRNRLILTGTPLQNN 635
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P++ K F + + P + L+ + + + L + ++P+
Sbjct: 636 LPELWALLNFVLPKIFNSAKTFDDWFNTPFANTGGQEKLELTEEEMLLIIRRLHKVLRPF 695
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFDGSP 595
LRRLK EV E D L K E ++ +L+ Q+QLYE L N+ + + +G+
Sbjct: 696 LLRRLKKEV--EKD------LPDKVEKVIKCKLSGLQQQLYEQMLKHNALFIGAGAEGAT 747
Query: 596 LAAL-------TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
+ L+KIC+HP V D ++ ++NP D+
Sbjct: 748 KGGIKGLNNKIMQLRKICNHPF---------VFDEVEGVINPSRGN---------TDLLY 789
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRID 708
+ +S K + +L K GH VLIF Q ++++++++ + + K++R+D
Sbjct: 790 R---------VSGKFELLDRVLSKFHATGHRVLIFFQMTQVMDIMEDFLRMRNLKYMRLD 840
Query: 709 GTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSV 767
GTTKA +R ++ F D FLL+++ GGLGL L AD VI+ D WNP D Q+
Sbjct: 841 GTTKADERTDMLKAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQ 900
Query: 768 DRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKEQIRYF 818
DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +EQ +
Sbjct: 901 DRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQEAF- 959
Query: 819 SQQDLRELL 827
LR LL
Sbjct: 960 ----LRRLL 964
>gi|348514137|ref|XP_003444597.1| PREDICTED: probable global transcription activator SNF2L2-like
[Oreochromis niloticus]
Length = 1592
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 174/545 (31%), Positives = 269/545 (49%), Gaps = 71/545 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALVV 358
I ML +Q +GL W+ SL+ GIL D+MGLGKT+Q + L H RL L++
Sbjct: 744 INGMLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLII 803
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+W+ EL S Y GT R Q VLLTTY+ +
Sbjct: 804 VPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVPQLRSGKFNVLLTTYEYI------ 857
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D+ W YMI+DEGH +KN + + L + R++++GTP+QN
Sbjct: 858 ------IKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNK 911
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P ++ L+ E+ I + + L + ++P+
Sbjct: 912 LPELWALLNFLLPTIFKCCSTFEQWFNAPFAMTGERVDLNEEETI--LIIRRLHKVLRPF 969
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV + L +K E ++ +++ Q+ LY + I+L+ DGS
Sbjct: 970 LLRRLKKEV--------ESQLPEKVEYVIKCDMSAIQKVLYR-HMQKGILLT--DGSEKD 1018
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ + LKKIC+HP M + + AE L
Sbjct: 1019 KKGKGGAKTLMNTIMQLKKICNHPY----------------MFQHIEESFAEHLGYPNGI 1062
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
++ D ++ S K + +L KL H VL+F Q ++ ++++ G + +++L
Sbjct: 1063 ISGPDLYR-----ASGKFELLDRILPKLQATNHRVLLFCQMTSLMTIMEDYFGYRNFQYL 1117
Query: 706 RIDGTTKASDRVKIVNDF-QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
R+DGTTK+ DR ++ F +EG IFLL+++ GGLGL L AD V++ D WNP D
Sbjct: 1118 RLDGTTKSEDRAALLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDL 1177
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQI 815
Q+ DRA+RIGQ+ +V V RL T +VEEKI Y+ +++ + G+F + E+
Sbjct: 1178 QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHER- 1236
Query: 816 RYFSQ 820
R F Q
Sbjct: 1237 RAFLQ 1241
>gi|350407682|ref|XP_003488159.1| PREDICTED: ATP-dependent helicase brm-like [Bombus impatiens]
Length = 2009
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 261/536 (48%), Gaps = 68/536 (12%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLLS 365
+Q +GL WL SL GIL D+MGLGKT+Q + L + + L++ P + LS
Sbjct: 1188 YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLS 1247
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W+ E S + Y G+ R + Q VLLTTY+ V I
Sbjct: 1248 NWVLEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYV------------I 1295
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKELWAL 484
D+ W YMI+DEGH +KN + + L + HR++++GTP+QN L ELWAL
Sbjct: 1296 KDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWAL 1355
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
NF P + F++ + P +K L+ E+ I + + L + ++P+ LRRLK
Sbjct: 1356 LNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI--LIIRRLHKVLRPFLLRRLKK 1413
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--------- 595
EV + L K E I+ ++ Q+ LY+ + ++L+ DGS
Sbjct: 1414 EV--------ESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLT--DGSEKGKQGKGGA 1463
Query: 596 ---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
+ + L+K+C+HP + A+ EK H+
Sbjct: 1464 KALMNTIVQLRKLCNHPFMFQ--------------------AIEEKYCEHVGTQGSGVIT 1503
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
S K + +L KL H VL+F Q +++ ++++ + +G+ +LR+DGTTK
Sbjct: 1504 GPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTK 1563
Query: 713 ASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
A DR ++ F + G +FLL+++ GGLGL L AD VI+ D WNP D Q+ DRA+
Sbjct: 1564 AEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 1623
Query: 772 RIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQIRYF 818
RIGQK +V V RLMT +VEE+I Y+ +++ + G+F + E+ ++
Sbjct: 1624 RIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFL 1679
>gi|302184809|ref|ZP_07261482.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv.
syringae 642]
Length = 880
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 174/514 (33%), Positives = 260/514 (50%), Gaps = 72/514 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-----AGLFHSR 350
LP + L P+Q EGL W+ SL G+L DDMGLGKT+Q L AG R
Sbjct: 398 LPDGLNATLRPYQLEGLSWMQSLRELEVDGVLADDMGLGKTLQTLAHLLMEKQAG----R 453
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYD 410
L + AL V P +L+ +W+ E K+ +G +++ LQD ++LTTY
Sbjct: 454 LDRPALAVMPTSLIPNWLDESEHFTPDLKVLALYGA----NRHQDAGNLQDYDLILTTYA 509
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + + L F +ILDE IKNP+++ A++ + + R+ +S
Sbjct: 510 LLPRDLELLEKQPF------------HVLILDEAQYIKNPNSKAAQAARNLNARQRLCLS 557
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N+L ELW+LF+F P LG++K F Y I +KH + R+ L
Sbjct: 558 GTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAI----EKHG--NQDRL-----HHL 606
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 607 NARIKPFLLRRTKEQVATE--------LPPKTEIIHWVDLNDAQRDVYET---------- 648
Query: 591 FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
L + KK+ D + K A + ++++L +L V K
Sbjct: 649 ------VRLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQ 700
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
S K++ ++ + ++L+ EG +L+FSQ ML+LI+E + +G + + G+
Sbjct: 701 -------GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGS 753
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T+ DR ++DFQ G + PIFL++ + GG GL LT AD VI DP WNP+ +NQ+ DRA
Sbjct: 754 TR--DRRTPIHDFQSGKL-PIFLISLKAGGTGLNLTAADTVIHYDPWWNPAAENQATDRA 810
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
YRIGQ K V VY+++ GTVEEKI R Q K L
Sbjct: 811 YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 844
>gi|326428818|gb|EGD74388.1| hypothetical protein PTSG_12442 [Salpingoeca sp. ATCC 50818]
Length = 1313
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 204/372 (54%), Gaps = 63/372 (16%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LP L+ HQREG++WLW+L GGIL DDMGLGKT+Q+ +L GLF S LI
Sbjct: 123 FFLPQDTYEKLYKHQREGVKWLWTLFKNQHGGILADDMGLGKTVQVSSYLDGLFASELIH 182
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVR 413
AL+V P +L + W KEL + ++ + GT R+ L VL++ G+ LTTY +V
Sbjct: 183 SALIVLPLSLAATWKKELAFWAPNVNVQVFHGTRKAARRKALMSVLKEGGICLTTYGMVL 242
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
++ +D+ + +WDY+ILDEGH I+N ++Q AK++ E+ + +RII+SGTP
Sbjct: 243 SS----------TDDLNHEGHVWDYVILDEGHKIRNHTSQSAKAIREVNTDNRIILSGTP 292
Query: 474 IQNNLKELWALFNFCC-PELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
IQN L ELWALF+F C LLG + F ++E I++G+D+ A +K VA+ LR+
Sbjct: 293 IQNKLGELWALFDFVCFGTLLGSRRTFTNEFEKTIVQGSDRKATRMQKLDAQEVAETLRK 352
Query: 533 RIQPYFLRRLKNEVF-----------------------HEDDVTSSA------------- 556
IQP+FLRR K D +SA
Sbjct: 353 LIQPHFLRREKKTALCSGGGDQGKTAQDAVLAGCAVVDDSPDQAASACKQLPTDANDDDD 412
Query: 557 --------------TLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALT 600
+L +K+++++W+RL+ Q ++Y FLNSE V + SPLAAL
Sbjct: 413 DAGGAVKHESGAPKSLPRKDDLVMWIRLSELQERIYTHFLNSERVQEILNSTKSPLAALN 472
Query: 601 ILKKICDHPLLL 612
++KK+CDHP LL
Sbjct: 473 VMKKLCDHPRLL 484
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 158/236 (66%), Gaps = 6/236 (2%)
Query: 656 HDNI--SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKA 713
HD + S K+ F + LL++L EGH L+FSQ+ KML++I + +G K R+ G
Sbjct: 591 HDVVKQSGKLRFCVHLLEQLRQEGHRALLFSQSLKMLDIISAVLNEQGVKHSRLHGAISD 650
Query: 714 SD-RVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYR 772
+D R KIV+DF LLT+QVGG+GLTLT ADRVI+ DP+WNPSTD Q+VDRAYR
Sbjct: 651 TDERQKIVDDFNSDASIFCMLLTTQVGGVGLTLTGADRVIIFDPSWNPSTDAQAVDRAYR 710
Query: 773 IGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQ 832
IGQ + VVVYRL+TCGT+EEKIYRKQ+FK GL + AT + RYFS+ +++ L L +
Sbjct: 711 IGQTRRVVVYRLITCGTIEEKIYRKQVFKDGLSRVATSSQNPYRYFSRNEIKALFKL--E 768
Query: 833 GFDVSLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSLLFSKTARVQVV 888
VS T QL + HG Q + DE LEAH++ L ++ S+H+LLFSK + + V
Sbjct: 769 DTSVSETFVQLQQLHGKQID-DEELEAHVRALPATELSATSNHALLFSKANQDEAV 823
>gi|353237437|emb|CCA69410.1| probable SNF2-component of SWI/SNF global transcription activator
complex [Piriformospora indica DSM 11827]
Length = 1354
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 274/544 (50%), Gaps = 84/544 (15%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA----- 355
G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + + LI+R
Sbjct: 481 GGTLKEYQLKGLQWMVSLYNNKLDGILADEMGLGKTIQTISLI-----TYLIERKNEPGP 535
Query: 356 -LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
LV+ P + L++W E S + Y G R ++Q Q VLLTTY+ +
Sbjct: 536 YLVIVPLSTLTNWSLEFAKWAPSLTVISYKGLPNVRRNLQMQLRNQFH-VLLTTYEYI-- 592
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTP 473
I D W +MI+DEGH +KN +++ +++L + S HR+I++GTP
Sbjct: 593 ----------IKDRPILCKWKWTHMIIDEGHRMKNTNSKLSQTLTQFYTSRHRLILTGTP 642
Query: 474 IQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELR 531
+QNNL ELWAL NF P++ + F E + P G DK L+ E+ + + + L
Sbjct: 643 LQNNLPELWALLNFVLPKVFNSIQSFDEWFNTPFANTGGGDKIELNEEESL--LIIRRLH 700
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLS-A 590
+ ++P+ LRRLK +V A L K+E ++ +R++ Q +LY N +++S A
Sbjct: 701 KVLRPFLLRRLKKDV--------EADLPDKSERVIKVRMSGLQSRLYYQMQNFGMIVSGA 752
Query: 591 FDGSPLA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA 644
+G L +KIC HP L G+ M
Sbjct: 753 GNGKAQQIKGLQNVLMQYRKICQHPYLFDDVETSMANHGLGGM----------------- 795
Query: 645 DVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKF 704
EQ +S K+ +L KL GH VL+F Q K+++++++ + +G++F
Sbjct: 796 ---------EQLIRVSGKMELCNRMLPKLFRSGHRVLMFFQMTKVMDIMEDYLRYRGWEF 846
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
LR+DG+TK DR +++ F + +P IFLL+++ GGLGL L AD VI+ D WNP
Sbjct: 847 LRLDGSTKPEDRAELLAKFNAPN-SPYNIFLLSTRAGGLGLNLQTADTVILYDSDWNPHA 905
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLF--KTATEH 811
D Q+ DRA+RIGQ K V +YR +T ++EE + + ++ + G F K++ +
Sbjct: 906 DLQAQDRAHRIGQTKIVRIYRFVTEKSIEESMLARARNKLNIDEKVIQAGKFDNKSSAQE 965
Query: 812 KEQI 815
+E I
Sbjct: 966 REAI 969
>gi|390338769|ref|XP_785657.3| PREDICTED: DNA repair and recombination protein RAD54B-like
[Strongylocentrotus purpuratus]
Length = 761
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 178/561 (31%), Positives = 288/561 (51%), Gaps = 57/561 (10%)
Query: 304 LFPHQREGLRWLWSL-----HCQGKGGILGDDMGLGKTMQICGFLAGLFHS------RLI 352
L PHQ++G+ +L+ +G G IL D+MGLGKT+Q + LF +I
Sbjct: 128 LRPHQQKGVIFLYECIMGLRQYEGCGAILADEMGLGKTLQCITLVWTLFKQGPYGGKPII 187
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREY-FGTCVKTRQYELQYVLQDKGVLLTTYDI 411
KR L+V P +L+ +W +E S +I + + K +++ + V++ +Y++
Sbjct: 188 KRVLIVTPGSLVKNWCREFRKWLGSERISVFPVSSDKKVEEFKKSPLFP---VMVISYEM 244
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
+ + +RG +F D ++ DEGH +KN + + A L + RI+++G
Sbjct: 245 MVRYADDIRGITF------------DLVVCDEGHRLKNSTIKTASLLSSLAVRRRILLTG 292
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
TPIQN+L+E +++ FC P +LG + F YE PILR N A EK +G+A A EL
Sbjct: 293 TPIQNDLQEFYSIVEFCNPGVLGTSGSFHRVYEEPILRSNQPSATKEEKTLGAARATELS 352
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
+ LRR + ++ L K E +V+ + ++ Q +LY+ L S ++ S
Sbjct: 353 RLTSLFVLRRTQE--------INNKYLPPKVETVVFCKPSALQLRLYQHLLRSPLIRSCL 404
Query: 592 D---------GSP-LAALTILKKICDHPLLL---TKRAAED-VLDGMDSML----NPEDA 633
GSP L + LKK+C+ P LL +++A E+ G +S L + E++
Sbjct: 405 SRGYASSASAGSPHLVCIGALKKLCNDPSLLYQASRKADEEGKRRGGESWLLDHDDEEES 464
Query: 634 ALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLI 693
L ++ D +E H C +S +L + +++ S + L+++
Sbjct: 465 LYKGLLPIYPPDYSEGRPLLA-HCGKLCVLSEMLRAMHADPTRRERLVLVSNYTQTLDIL 523
Query: 694 QESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVA-PIFLLTSQVGGLGLTLTKADRVI 752
Q +GY+F R+DG+T + R IV F IFLL+S+ GG+GL L A R++
Sbjct: 524 QALCSIEGYQFCRLDGSTPTAKRQSIVEHFNSSYAKETIFLLSSKAGGVGLNLIGASRLL 583
Query: 753 VVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHK 812
+ D WNP+ D Q++ R +R GQKK V +YRL+T GT+EEKIY++QI K L + K
Sbjct: 584 LYDIDWNPANDLQAMARVWRDGQKKTVHIYRLITAGTIEEKIYQRQISKQSLSGAVVDAK 643
Query: 813 EQIRY--FSQQDLRELLSLPK 831
Q FS +DLR+L +L K
Sbjct: 644 GQSGSVKFSLEDLRDLFTLHK 664
>gi|83764905|dbj|BAE55049.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1417
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 265/518 (51%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + + + LV+
Sbjct: 534 VGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEKKKNNGPFLVI 593
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + Q + VLLTTY+ +
Sbjct: 594 VPLSTLTNWNLEFEKWAPSVARVVYKGPPNARKQQQQQIRWGNFQVLLTTYEYI------ 647
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W++MI+DEGH +KN ++ + +L + S +R+I++GTP+QNN
Sbjct: 648 ------IKDRPILSKVKWNHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNN 701
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 702 LPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQL--LVIRRLHKVLR 759
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ R ++ Q +LY+ + ++++ +S G
Sbjct: 760 PFLLRRLKKDV--EKD------LPDKQERVIKCRFSALQAKLYKQLVTHNKMAVSDGKGG 811
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP
Sbjct: 812 KTGMRGLSNMLMQLRKLCNHPF---------VFEPVEDQMNPGRGT-------------- 848
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + S LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 849 --------NDLLWRTSGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKY 900
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ F E FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 901 LRLDGSTKSDDRSDLLKLFNAENSEYFCFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 960
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 961 LQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFK 998
>gi|391863236|gb|EIT72547.1| superfamily II DNA/RNA helicase [Aspergillus oryzae 3.042]
Length = 1422
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 265/518 (51%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + + + LV+
Sbjct: 539 VGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEKKKNNGPFLVI 598
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + Q + VLLTTY+ +
Sbjct: 599 VPLSTLTNWNLEFEKWAPSVARVVYKGPPNARKQQQQQIRWGNFQVLLTTYEYI------ 652
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W++MI+DEGH +KN ++ + +L + S +R+I++GTP+QNN
Sbjct: 653 ------IKDRPILSKVKWNHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNN 706
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 707 LPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQL--LVIRRLHKVLR 764
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ R ++ Q +LY+ + ++++ +S G
Sbjct: 765 PFLLRRLKKDV--EKD------LPDKQERVIKCRFSALQAKLYKQLVTHNKMAVSDGKGG 816
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP
Sbjct: 817 KTGMRGLSNMLMQLRKLCNHPF---------VFEPVEDQMNPGRGT-------------- 853
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + S LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 854 --------NDLLWRTSGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKY 905
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ F E FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 906 LRLDGSTKSDDRSDLLKLFNAENSEYFCFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 965
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 966 LQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFK 1003
>gi|336469381|gb|EGO57543.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Neurospora tetrasperma FGSC 2508]
gi|350290984|gb|EGZ72198.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Neurospora tetrasperma FGSC 2509]
Length = 1454
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 275/520 (52%), Gaps = 73/520 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 507 VGGTLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIEKKQQNGPYLVI 566
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
P + L++W E S Y G TR+ + + + + + VLLTTY+ +
Sbjct: 567 VPLSTLTNWNLEFDKWAPSVAKIVYKGPP-NTRKLQQEKIRRGEFQVLLTTYEYI----- 620
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH-RIIISGTPIQN 476
I D W +MI+DEGH +KN +++ + ++ + S R+I++GTP+QN
Sbjct: 621 -------IKDRPLLSKIKWFHMIIDEGHRMKNANSKLSATIQQFYSTRFRLILTGTPLQN 673
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERI 534
NL ELW++ NF P + K F E + P G DK L E++I V + L + +
Sbjct: 674 NLAELWSMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVL 731
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDG 593
+P+ LRRLK +V E D L K E ++ + ++ Q++LY+ + + +I++S G
Sbjct: 732 RPFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQQRLYKQMVTHQKILVSDGKG 783
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
A + L+K+C+HP V D +++ +NP + +
Sbjct: 784 GKTGARGLSNMIMQLRKLCNHPF---------VFDEVENQMNPTNTS------------- 821
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++++++ + +G +
Sbjct: 822 ---------NDLLWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDFLRFRGIQ 872
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+LR+DGTTKA DR +++ F D +P +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 873 YLRLDGTTKAEDRSELLRLFNAPD-SPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPH 931
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 932 QDLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARFK 971
>gi|85083489|ref|XP_957128.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Neurospora crassa OR74A]
gi|28918214|gb|EAA27892.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Neurospora crassa OR74A]
Length = 1455
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 275/520 (52%), Gaps = 73/520 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 508 VGGTLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIEKKQQNGPYLVI 567
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
P + L++W E S Y G TR+ + + + + + VLLTTY+ +
Sbjct: 568 VPLSTLTNWNLEFDKWAPSVAKIVYKGPP-NTRKLQQEKIRRGEFQVLLTTYEYI----- 621
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH-RIIISGTPIQN 476
I D W +MI+DEGH +KN +++ + ++ + S R+I++GTP+QN
Sbjct: 622 -------IKDRPLLSKIKWFHMIIDEGHRMKNANSKLSATIQQFYSTRFRLILTGTPLQN 674
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERI 534
NL ELW++ NF P + K F E + P G DK L E++I V + L + +
Sbjct: 675 NLAELWSMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVL 732
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDG 593
+P+ LRRLK +V E D L K E ++ + ++ Q++LY+ + + +I++S G
Sbjct: 733 RPFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQQRLYKQMVTHQKILVSDGKG 784
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
A + L+K+C+HP V D +++ +NP + +
Sbjct: 785 GKTGARGLSNMIMQLRKLCNHPF---------VFDEVENQMNPTNTS------------- 822
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++++++ + +G +
Sbjct: 823 ---------NDLLWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDFLRFRGIQ 873
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+LR+DGTTKA DR +++ F D +P +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 874 YLRLDGTTKAEDRSELLRLFNAPD-SPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPH 932
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 933 QDLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARFK 972
>gi|401827829|ref|XP_003888207.1| SNF2-like helicase [Encephalitozoon hellem ATCC 50504]
gi|392999407|gb|AFM99226.1| SNF2-like helicase [Encephalitozoon hellem ATCC 50504]
Length = 823
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 209/699 (29%), Positives = 335/699 (47%), Gaps = 116/699 (16%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGL-FH 348
P + P + + L +Q EGL WL ++H IL D+MGLGKT+Q FL + +
Sbjct: 39 PYTFVSSPRFVLHELKDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAFLGYIRYV 98
Query: 349 SRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG-VLLT 407
+ K+ L+V PK+ L++W +E + K+R ++ + + R+ E + ++ K LT
Sbjct: 99 KKERKKHLIVLPKSTLANWKREFKKFMPNYKVRVFYSSRKEMRK-EAEEIMSSKWDACLT 157
Query: 408 TYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI 467
TY++ N L + W Y+I+DE H IKN + +K + HR+
Sbjct: 158 TYEMCINAKNIL------------NTVDWSYIIIDEAHRIKNEHSLLSKIVRIFSCDHRL 205
Query: 468 IISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVA 527
+I+GTP+QNN+ ELWAL NF PE+ D + F EKY + I G+ G A+
Sbjct: 206 LITGTPLQNNVHELWALLNFIVPEIFNDAEKF-EKYVMNIDEGD-----------GEAI- 252
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI- 586
K +R +Q +FLRR K +V L K + ++ +L+ QR+ Y L ++
Sbjct: 253 KRIRSVLQLFFLRREKVDV--------EEGLPPKKVINLYSKLSPMQREWYRMLLKRDLS 304
Query: 587 -VLSAFD--GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHI 643
+ S D G + + L+K C+HP L E + D + E
Sbjct: 305 PLGSTRDPKGMLMNVVMQLRKCCNHPYLFPDAEPEPYTN---------DKHIIEN----- 350
Query: 644 ADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYK 703
S K+ + LL L +G VLIFSQ ML+++++ KGY+
Sbjct: 351 ----------------SGKMVMLDKLLANLKAKGSRVLIFSQMSMMLDILEDYAMFKGYE 394
Query: 704 FLRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+ RIDG+T DR + ++ F EG IFLLT++ GGLG+ L+ AD VI+ D WNP
Sbjct: 395 YCRIDGSTSYRDRTEAIDTFNAEGSDKFIFLLTTRAGGLGINLSTADTVILFDSDWNPQM 454
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQD 822
D Q+ DRA+RIGQKK V+V+RL++ TVEE+I + + K L + ++ SQ +
Sbjct: 455 DLQAQDRAHRIGQKKQVMVFRLISENTVEERIVYRSLQKLKLDDILLQGSQRNSTVSQSE 514
Query: 823 LRELLSLPKQGFDVSLTQQQLHEEHGDQHNMDESL--------EAHIQFLDTLGIAGVSH 874
L ++L+ G +++ E+ G+ ++D+ + E +++ D
Sbjct: 515 LIDILA---NGIEIA-------EDDGEDESIDDLIRRGEEKTREMNMKLCD--------- 555
Query: 875 HSLLFSKTARVQV---VQEEEEATRRKGTAFVGN--------SSSSYLV---ARNVDGAE 920
S T + E E+ +K +F+ N S +S L R V+ E
Sbjct: 556 --FKISDTLNTNIDCYTWEGEDYNVKKIESFIENTQNGQGRSSRASVLFRARPRVVEYPE 613
Query: 921 YAFNPRDIK-LNKKSSSPKNEAK-LKESDIKERIKRLSQ 957
Y F PR++K + +K E K L + D+ + + LSQ
Sbjct: 614 YQFYPRELKDIQEKEVRLYEEGKGLSQDDVARKKELLSQ 652
>gi|342885327|gb|EGU85368.1| hypothetical protein FOXB_04079 [Fusarium oxysporum Fo5176]
Length = 805
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/572 (30%), Positives = 280/572 (48%), Gaps = 76/572 (13%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ K+ +L PHQ EG+++++ C + G I+ D+MGLGKT+Q
Sbjct: 202 PRVPVVIDPKLAKILRPHQVEGVKFMY--RCVTGLIDEKANGCIMADEMGLGKTLQCISL 259
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
+ L I++A+VV P +L+ +W EL L F K + EL
Sbjct: 260 MWTLLKQSPDAGKPTIQKAIVVCPASLVKNWANELVK-WLGPNAINPFAIDGKASKEELT 318
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N + L+ + + DEGH
Sbjct: 319 RQLRQWAIASGRAVTRPVIIVSYETLRLNVEELKHTKI------------GLLFCDEGHR 366
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN + +L + + R+I++GTPIQN+L E ++L +F P+LLG F+++YE+P
Sbjct: 367 LKNSDSNTFNALNSLNVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIP 426
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A + +++ G L + + +RR N++ S L K E +V
Sbjct: 427 ILRGRDADASEEDRKKGDECTAALLNVVNKFLIRR-TNDIL-------SKYLPVKYEHVV 478
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G
Sbjct: 479 FCNLAPFQFDLYNYFIKSPDIQALLRGKGSQPLKAINILKKLCNHPDLLN---MADDLPG 535
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GH 678
+ P+D E + + I S +++LD+++
Sbjct: 536 SEQCF-PDDYVPKES--------------RGRDREIKSWYSGKMAVLDRMLARIRQDTND 580
Query: 679 NVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTS 736
+++ S L+L + S+ Y LR+DGT + R K+V+ F EGD +FLL+S
Sbjct: 581 KIVLISNYTSTLDLFERMCRSRQYGCLRLDGTMNVNKRQKLVDRFNDPEGDEF-VFLLSS 639
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+ GG G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI++
Sbjct: 640 KAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQ 699
Query: 797 KQIFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
+Q K L + E + R+FS LREL
Sbjct: 700 RQSHKQSLSSCVVDSAEDVERHFSLDSLRELF 731
>gi|295674669|ref|XP_002797880.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280530|gb|EEH36096.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 1332
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 266/518 (51%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 433 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQNGPFLVI 492
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + + VLLTTY+ +
Sbjct: 493 VPLSTLTNWNLEFEKWAPSVSRIVYKGPPTTRKQQQQAIRWGNFQVLLTTYEYI------ 546
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L + + +R+I++GTP+QNN
Sbjct: 547 ------IKDRPVLSKVKWIHMIVDEGHRMKNAGSKLSSTLTQYYTTRYRLILTGTPLQNN 600
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELW L NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 601 LPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQL--LVIRRLHKVLR 658
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ + ++++V+S G
Sbjct: 659 PFLLRRLKKDV--EKD------LPEKQERVIKCRFSALQAKLYKQLVTHNKLVVSDGKGG 710
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP A
Sbjct: 711 KTGMRGLSNMLMQLRKLCNHPF---------VFESVEDEMNPGRAT-------------- 747
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 748 --------NDLIWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKY 799
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ +F G FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 800 LRLDGSTKSDDRSDLLKEFNAPGSEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD 859
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL+T +VEE+I + FK
Sbjct: 860 LQAQDRAHRIGQKNEVRILRLITSNSVEERILERAQFK 897
>gi|320035113|gb|EFW17055.1| DNA excision repair protein [Coccidioides posadasii str. Silveira]
Length = 1011
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 181/596 (30%), Positives = 280/596 (46%), Gaps = 112/596 (18%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-- 347
P S ++P I L +Q EG +L L KGGILGDDMGLGKT+Q+ FL +
Sbjct: 205 PYSLGLVPAPIAQWLRDYQVEGASFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGK 264
Query: 348 -----------------HSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKT 390
S R+L++ P TL+ +W EL+ G + + Y G T
Sbjct: 265 TGDERDAKRMRKIRRKGDSIWYPRSLIICPGTLIQNWRSELSRWGWWS-VEVYHG---DT 320
Query: 391 RQYELQYVLQDK-GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
++ LQ + + +L+TTY R N SL + WD ++ DE HL+K+
Sbjct: 321 KEEALQSAISGRVEILITTYTTYRMNKDSL------------NMVEWDCVVADECHLMKD 368
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
++ AKS+ E+ + RI ++GT IQN +ELW L N+ P G +K P+
Sbjct: 369 RRSETAKSMHELNALCRIGLTGTAIQNKYEELWTLLNWTNPGKFGPASTWKTTISDPLKI 428
Query: 510 GNDKHALDREKRIGSAVAKELRERIQP-YFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
G A + AK+L + + P +FLRR+K + + L +K++ +V+
Sbjct: 429 GQSHDATVYQLSKARKTAKKLVKNLLPAFFLRRMKTLIADQ--------LPRKSDRVVFC 480
Query: 569 RLTSCQRQLYEAFLNS---EIVLSAFDGSP-------------------------LAALT 600
LT Q YE L+S E + + D P A++
Sbjct: 481 PLTETQADAYENLLDSAMIECIKMSSDPCPCGSKKKAGWCCYKRIPGGGPWQNYVFPAIS 540
Query: 601 ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNIS 660
L+K+C+HP L ++ + PE+ + LAM +VA D ++E +
Sbjct: 541 NLQKLCNHPATLIPQSTD-----------PEEKQ-EKDLAM--LEVAVPDQWRELYRTRG 586
Query: 661 CKISFILSLLDKLIPE------------------GHNVLIFSQTRKMLNLIQESIGSKGY 702
S+L+ PE G VL+FS + ++L ++Q Y
Sbjct: 587 -------SILNYSNPEFCGKWKVLKKLLKWWHANGDKVLVFSHSVRLLRMLQMLFNHTSY 639
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+DGT DR K+V+DF +FL++++ GG+GL +T A++V+VVDP WNPS
Sbjct: 640 NVSYLDGTMSYEDRAKVVDDFNADPRQFVFLISTKAGGVGLNITSANKVVVVDPNWNPSH 699
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
D Q+ DRAYRIGQ++DV V+RL++ GT+EE +Y +QI+K + RYF
Sbjct: 700 DLQAQDRAYRIGQRRDVEVFRLVSAGTIEEIVYARQIYKQQQANIGYNASTERRYF 755
>gi|410077739|ref|XP_003956451.1| hypothetical protein KAFR_0C03240 [Kazachstania africana CBS 2517]
gi|372463035|emb|CCF57316.1| hypothetical protein KAFR_0C03240 [Kazachstania africana CBS 2517]
Length = 913
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 178/581 (30%), Positives = 280/581 (48%), Gaps = 67/581 (11%)
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHSR-----LIKRALVVAPKTLLSHWIKEL------- 371
G I+ D+MGLGKT+Q L L LI + ++V P +L+++W EL
Sbjct: 347 GCIMADEMGLGKTLQCIALLWTLLRQGPQGKGLIDKCIIVCPSSLVNNWANELVKWLGPG 406
Query: 372 --TAVGLSAKIREYFGTCVKTRQYELQYVLQDKG------VLLTTYDIVRNNSKSLRGSS 423
T + + K + ++ Q KG VL+ +Y+ +R N L+ S+
Sbjct: 407 TLTPLAIDGKKSSITDAGNASVADAIRSWAQAKGRNIVKPVLIISYETLRRNVDQLKNSN 466
Query: 424 FISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWA 483
M+ DEGH +KN + +L I R+I+SGTPIQN+L E +A
Sbjct: 467 V------------GLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFA 514
Query: 484 LFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLK 543
L +F P LLG F+ YELPILRG D A D+E + G ++L + + +RR
Sbjct: 515 LLSFSNPGLLGSRAQFRRNYELPILRGRDAEATDKEIKKGEGQLEKLSNIVSKFIIRR-T 573
Query: 544 NEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG----SPLAAL 599
N++ S L K E ++++ L Q+ LY+ L S V G PL A+
Sbjct: 574 NDIL-------SKYLPCKYEHVIFVNLKPFQKSLYQQLLKSRDVKKLVKGMGGPQPLKAI 626
Query: 600 TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNI 659
+LKK+C+HP LL E L+ D + DV +E
Sbjct: 627 GLLKKLCNHPALLD---FEKELESAD---------------FELPDVFRDLHNREVQPQY 668
Query: 660 SCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVK 718
S K + + L K+ E + +++ S + L+LI+ K Y +R+DGT + R
Sbjct: 669 SGKFAILERFLHKINAESDDKIVLISNYTQTLDLIERMCRRKQYGVIRLDGTMSINKRQT 728
Query: 719 IVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKK 777
+V+ F + + IFLL+S+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKK
Sbjct: 729 LVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKK 788
Query: 778 DVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSLPKQGFDV 836
D +YR ++ GT+EEKIY++Q K L + KE + R FS +LR+L L + +
Sbjct: 789 DCFIYRFISTGTIEEKIYQRQSMKMSLSSCVVDAKEDVERLFSSGNLRKLFQLDED--TI 846
Query: 837 SLTQQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVSHHSL 877
T + H + ++H + + DT ++H +L
Sbjct: 847 CNTHETYHCKRCNKHGKQAVKANAMLYGDTTTWNHLNHDAL 887
>gi|330940925|ref|XP_003306005.1| hypothetical protein PTT_19012 [Pyrenophora teres f. teres 0-1]
gi|311316706|gb|EFQ85893.1| hypothetical protein PTT_19012 [Pyrenophora teres f. teres 0-1]
Length = 1393
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 264/519 (50%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRALVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L R LV+
Sbjct: 555 VGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKRQPGPYLVI 614
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +QY+ Q VLLTTY+ +
Sbjct: 615 VPLSTLTNWTNEFEKWAPSVTKIVYKGPPNSRKQYQQQIRWGQFQVLLTTYEFI------ 668
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + ++ + + +R+I++GTP+QNN
Sbjct: 669 ------IKDRPVLSKIKWVHMIVDEGHRMKNAGSKLSMTITQYYTTRYRLILTGTPLQNN 722
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWA+ NF P + F E + P G DK L E+++ V + L + ++
Sbjct: 723 LTELWAMLNFVLPTIFKSATSFDEWFNTPFANTGGQDKMELTEEEQL--LVIRRLHKVLR 780
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ ++ Q +LY+ + ++ +++S G
Sbjct: 781 PFLLRRLKRDV--EKD------LPDKTERVIKCNFSTLQAKLYKQLVTHNRLMVSDGKGG 832
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ ++NP +
Sbjct: 833 KTGMRGLSNMLMQLRKLCNHPF---------VFEEVEDVMNPTKST-------------- 869
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + S LLD+++P+ GH VL+F Q +++N++++ + +G +
Sbjct: 870 --------NDLLWRASGKFELLDRILPKFQATGHRVLMFFQMTQIMNIMEDYLRLRGMMY 921
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
LR+DG TKA DR ++ F D +P FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 922 LRLDGATKADDRSDLLRLFNAPD-SPYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 980
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL+T +VEEKI + +K
Sbjct: 981 DLQAQDRAHRIGQKNEVRILRLITSNSVEEKILERANYK 1019
>gi|255555479|ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
communis]
gi|223542157|gb|EEF43701.1| DNA repair and recombination protein RAD54B, putative [Ricinus
communis]
Length = 940
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 279/558 (50%), Gaps = 58/558 (10%)
Query: 303 MLFPHQREGLRWLW----SLHCQGK--GGILGDDMGLGKTMQICGFLAGLF-----HSRL 351
L PHQREG+++++ LH G IL DDMGLGKT+Q L L +
Sbjct: 189 FLRPHQREGVQFMFDCVSGLHSAANINGCILADDMGLGKTLQSITLLYTLLGQGFDDKPM 248
Query: 352 IKRALVVAPKTLLSHWIKELTA-VGLSAKIREYFGTCVKTRQYELQYV------LQDKGV 404
+++A++V P +L+S+W E+ VG S K+ C TR + + + V
Sbjct: 249 VRKAIIVTPTSLVSNWEAEIKKWVGESVKL---IALCETTRDDVVSGIDSFANPRSNLQV 305
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
L+ +Y+ R +S S F DE+ D +I DE H +KN T ++L +
Sbjct: 306 LIVSYETFRMHS-----SKFSHDES------CDLLICDEAHRLKNDQTLTNRALAALSCK 354
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
RI++SGTP+QN+L+E +A+ NF P +LGD +F+ YE PI+ G + A + EK++G+
Sbjct: 355 RRILLSGTPMQNDLEEFFAMVNFTNPGILGDAAYFRRYYETPIICGREPTATEEEKKLGA 414
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS 584
+ EL ++ + LRR + S L K +V +LT Q +LY F++S
Sbjct: 415 ERSGELSAKVNQFILRR--------TNALLSNHLPPKIVEVVCCKLTPLQSELYNHFIHS 466
Query: 585 EIVLSAFD-----GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKL 639
+ V A LA +T LKK+C+HP L+ + + G ED
Sbjct: 467 KNVKRAITEETKKSKILAYITALKKLCNHPKLI----YDTIRSGTPGTSGFEDCIRFFPP 522
Query: 640 AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIG 698
M +S K+ + LL L + +++ S + L+L +
Sbjct: 523 GMFSGRSGTWSGGDGSWIELSGKMHVLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCR 582
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPA 757
+ Y LR+DG T R K+VN F + +FLL+S+ GG GL L +R+++ DP
Sbjct: 583 ERRYPHLRLDGATSIGKRQKLVNRFNDQSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 642
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKE---- 813
WNP+ D Q+ R +R GQKK V +YR ++ GT+EEK+Y++Q+ K GL K +H++
Sbjct: 643 WNPANDKQAAARIWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQHEQNDST 701
Query: 814 --QIRYFSQQDLRELLSL 829
+ + S +DLR+L +
Sbjct: 702 ISEGNFLSTEDLRDLFTF 719
>gi|310286756|ref|YP_003938014.1| helicase [Bifidobacterium bifidum S17]
gi|309250692|gb|ADO52440.1| helicase [Bifidobacterium bifidum S17]
Length = 1339
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 276/542 (50%), Gaps = 75/542 (13%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-AGLFHSR 350
STY +P + ++L P+Q EG RWL ++ +G GGIL D+MGLGK++Q+ L A SR
Sbjct: 803 STYRVPAALASVLRPYQAEGFRWLNAVCDKGFGGILADEMGLGKSVQLLSLLLARHKESR 862
Query: 351 LIKRA-LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQY--ELQYVLQDKGV--- 404
+R L+V P +L+ +W+ E+ ++ GT + R ++ QD GV
Sbjct: 863 AERRPNLIVCPASLVYNWVAEVAKHTPELRVEAIAGTKPERRAMLDGVRAAQQDTGVSPT 922
Query: 405 -------------------LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGH 445
L+T+YD++R + G F M LDE
Sbjct: 923 RESARPASAAAASDDVPDVLVTSYDLLRRDIDDYAGLEFYC------------MTLDEAQ 970
Query: 446 LIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYEL 505
IKN +T+ +K++ + + HR ++GTPI+N L ELW++F+F P +LG F+E++E+
Sbjct: 971 YIKNAATKVSKAVRSVTAVHRFALTGTPIENRLSELWSIFDFLMPGMLGSYAHFRERFEM 1030
Query: 506 PILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMI 565
P+L G++ K+L+ + P+ LRRLK++V + L K E +
Sbjct: 1031 PVLSGDET------------AQKKLQSFVGPFILRRLKSQVLKD--------LPDKIENV 1070
Query: 566 VWLRLTSCQRQLYEAF---LNSEIVL---SAFDGSP---LAALTILKKICDHPLLLTKRA 616
+ ++L QR+LY A L S I+ + F+ LA LT L+++C P L+ + A
Sbjct: 1071 ITVQLQGEQRKLYAALEQQLRSVILRQRPADFNTGKIQILAQLTRLRQVCCDPRLIYENA 1130
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
DG S L+ + A+ + ++ + + S K+ I+ L+D
Sbjct: 1131 -----DGHASALSAGVQSAAKDPQQSVKQPVKQS--KARKTVSSAKLDAIIELVDSCRDA 1183
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
G +LIFSQ L+LI + + + G ++ I G T R+++V+ F D P+FL++
Sbjct: 1184 GRKMLIFSQFTSYLDLIAQRLRADGVEYDMITGATPKKRRLELVDRFN-ADATPVFLISL 1242
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+ G GL LT A V+ DP WN + +Q+ DRA+RIGQ +DV VY+++ T+EE+I
Sbjct: 1243 KAGNTGLNLTGACVVVHADPWWNAAAQDQATDRAHRIGQTQDVNVYQIVAKDTIEERILN 1302
Query: 797 KQ 798
Q
Sbjct: 1303 LQ 1304
>gi|150865273|ref|XP_001384421.2| component of SWI/SNF global transcription activator complex
[Scheffersomyces stipitis CBS 6054]
gi|149386529|gb|ABN66392.2| component of SWI/SNF global transcription activator complex
[Scheffersomyces stipitis CBS 6054]
Length = 1566
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 274/543 (50%), Gaps = 81/543 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL GIL D+MGLGKT+Q + L + I LV+
Sbjct: 664 VGGTLKEYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLITYLVEVKKINGPFLVI 723
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S K Y GT + + + + +LLTT++ +
Sbjct: 724 VPLSTLTNWNLEFDKWAPSVKKITYKGTPNQRKVMQQDIRQGNFQILLTTFEYI------ 777
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNN 477
I D+A W +MI+DEGH +KN +++ +++L S +R+I++GTP+QNN
Sbjct: 778 ------IKDKALLSRIRWVHMIIDEGHRMKNANSKLSETLTHSYHSDYRLILTGTPLQNN 831
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L E+ + V + L + ++
Sbjct: 832 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETL--LVIRRLHKVLR 889
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E D L K E +V +++S Q +LY+ L I+ ++ P
Sbjct: 890 PFLLRRLKKDV--EKD------LPNKVEKVVKCKMSSIQSKLYQLMLKYNILYASDPNGP 941
Query: 596 LAALTILK----------KICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
I+K KIC+HP V + +++++NP
Sbjct: 942 SDVPLIIKNANNQIMQLRKICNHPF---------VYEEVENLINP--------------- 977
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKG 701
E D I ++ LLDK++P+ GH VLIF Q ++++++++ + +G
Sbjct: 978 TIETSD-------IIWRVGGKFELLDKILPKFKTTGHRVLIFFQMTQIMDIMEDFLRLRG 1030
Query: 702 YKFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
K++R+DG TKA DR ++ F D FLL+++ GGLGL L AD V++ D WNP
Sbjct: 1031 MKYMRLDGGTKADDRTALLKLFNAPDSDYFCFLLSTRAGGLGLNLQTADTVVIFDTDWNP 1090
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEH 811
D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F +
Sbjct: 1091 HQDLQAQDRAHRIGQKNEVRILRLITEDSVEEMILERAHAKLEIDGKVIQAGKFDNKSTS 1150
Query: 812 KEQ 814
+EQ
Sbjct: 1151 EEQ 1153
>gi|358391719|gb|EHK41123.1| hypothetical protein TRIATDRAFT_207565 [Trichoderma atroviride IMI
206040]
Length = 1369
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 273/519 (52%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 549 VGGSLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEQKQQSGPYLVI 608
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
P + L++W E S Y G TR+ + + + Q + VLLTTY+ +
Sbjct: 609 VPLSTLTNWNLEFEKWAPSVSRVVYKGPP-NTRKLQQEKIRQGRFQVLLTTYEYI----- 662
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH-RIIISGTPIQN 476
I D W +MI+DEGH +KN ++ + ++ + + R+I++GTP+QN
Sbjct: 663 -------IKDRPILSKIKWFHMIIDEGHRMKNTQSKLSATIQQYYNTRFRLILTGTPLQN 715
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERI 534
NL ELWA+ NF P + K F E + P G DK L E++I V + L + +
Sbjct: 716 NLSELWAMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVL 773
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDG 593
+P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + ++++V+S G
Sbjct: 774 RPFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQSKLYKQMVTHNKLVVSDGKG 825
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
A + L+K+C+HP V D +++++NP + +
Sbjct: 826 GKTGARGLSNMIMQLRKLCNHPF---------VFDVVENVMNPLNIS------------- 863
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
+++ + + LLD+++P+ GH VL+F Q +++++++ + + YK
Sbjct: 864 ---------NDLLWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDYLRYRSYK 914
Query: 704 FLRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+LR+DGTTK+ +R ++ DF G +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 915 YLRLDGTTKSDERSDLLRDFNAPGSDYFLFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 974
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 975 DLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFK 1013
>gi|242023503|ref|XP_002432172.1| Homeotic gene regulator, putative [Pediculus humanus corporis]
gi|212517560|gb|EEB19434.1| Homeotic gene regulator, putative [Pediculus humanus corporis]
Length = 1504
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 170/555 (30%), Positives = 272/555 (49%), Gaps = 79/555 (14%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS- 349
+++ M+ GK+ +Q +GL WL SL GIL D+MGLGKT+Q G L L
Sbjct: 663 QASIMVNGKLKE----YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIGLLTYLMEKK 718
Query: 350 RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
R++ L++ P + LS+W+ E S + Y G+ R + Q VLLTTY
Sbjct: 719 RVMGPFLIIVPLSTLSNWVLEFEKWAPSVVVVAYKGSPHLRRSIQNQMRSTKFNVLLTTY 778
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRII 468
+ V I D+ W +MI+DEGH +KN + + L + HR++
Sbjct: 779 EYV------------IKDKGVLAKLHWRFMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLL 826
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
++GTP+QN L ELWAL NF P + F++ + P +K L+ E+ I + +
Sbjct: 827 LTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETI--LIIR 884
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
L + ++P+ LRRLK EV + L K E I+ ++ QR LY + ++L
Sbjct: 885 RLHKVLRPFLLRRLKKEV--------ESQLPDKVEYIIKCDMSGLQRVLYRHMQSKGVLL 936
Query: 589 SAFDGSP------------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
+ DGS + + L+K+C+HP + + +
Sbjct: 937 T--DGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQQ--------------------IE 974
Query: 637 EKLAMHI---ADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLI 693
EK H+ A V D S K + +L KL H VL+F Q +++ ++
Sbjct: 975 EKYCDHVGAAAGVISGPDLYR----ASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIM 1030
Query: 694 QESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVI 752
++ + + + +LR+DGTTK+ DR +++ F D +FLL+++ GGLGL L AD VI
Sbjct: 1031 EDYLTWRNFNYLRLDGTTKSEDRGELLRKFNSKDSEYFLFLLSTRAGGLGLNLQAADTVI 1090
Query: 753 VVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGG 803
+ D WNP D Q+ DRA+RIGQ+ +V V RLMT +VEE+I Y+ +++ + G
Sbjct: 1091 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAG 1150
Query: 804 LFKTATEHKEQIRYF 818
+F + E+ ++
Sbjct: 1151 MFDQKSTGSERQQFL 1165
>gi|291239595|ref|XP_002739708.1| PREDICTED: brahma-like protein [Saccoglossus kowalevskii]
Length = 1523
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/510 (32%), Positives = 253/510 (49%), Gaps = 60/510 (11%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-LIKRALVVAPKTLLS 365
+Q +GL W+ SL+ GIL D+MGLGKT+Q + L ++ + L+V P + LS
Sbjct: 661 YQIKGLEWMVSLYNNHLNGILADEMGLGKTIQTIALVTYLMETKKMTGPFLIVVPLSTLS 720
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W E S Y G+ + R Q VLLTTY+ V +
Sbjct: 721 NWAMEFDKWAPSVIKICYKGSPLVRRSLMFQLRGGRFNVLLTTYEYV------------M 768
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKELWAL 484
D+A W YMI+DEGH +KN + + L + HRI+++GTP+QN L ELWAL
Sbjct: 769 KDKATLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYMAPHRILLTGTPLQNKLPELWAL 828
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
NF P + F++ + P +K L+ E+ I + + L + ++P+ LRRLK
Sbjct: 829 LNFLLPTIFKSCNTFEQWFNAPFATTGEKVELNGEETI--LIIRRLHKVLRPFLLRRLKK 886
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--------- 595
EV + L +K E ++ +++ QR LY + ++L+ DGS
Sbjct: 887 EV--------ESQLPEKVEYVMKCDMSALQRVLYRHMQRNGVLLT--DGSEKDKKGKGGT 936
Query: 596 ---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
+ + L+K+C+HP + + + A E L V D +
Sbjct: 937 KTLMNTIMQLRKLCNHPFMFPQI----------------EEAFCEHLGQTGGIVQGADLY 980
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
+ S K + +L KL H L+FSQ ++ ++++ +G+++LR+DGTTK
Sbjct: 981 RS-----SGKFELLDRILPKLKACNHKALLFSQMTTLMTILEDYFAHRGFRYLRLDGTTK 1035
Query: 713 ASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
+ DR K++ F G IFLL+++ GGLGL L AD VI+ D WNP D Q+ DRA+
Sbjct: 1036 SDDRAKLLEMFNAPGSPYNIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 1095
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
RIGQK +V V RL+T +VEEKI +K
Sbjct: 1096 RIGQKSEVRVLRLLTVNSVEEKILAAARYK 1125
>gi|425772356|gb|EKV10763.1| RSC complex subunit (Sth1), putative [Penicillium digitatum PHI26]
gi|425774766|gb|EKV13066.1| RSC complex subunit (Sth1), putative [Penicillium digitatum Pd1]
Length = 1406
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 264/518 (50%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + + + LV+
Sbjct: 530 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITHIIEKKKNNGPFLVI 589
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + Q + VLLTTY+ +
Sbjct: 590 VPLSTLTNWNNEFDKWAPSVSKVVYKGPPNARKQQQQQIRWGNFQVLLTTYEYI------ 643
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L S +RII++GTP+QNN
Sbjct: 644 ------IKDRPVLSKIKWTHMIVDEGHRMKNTQSKLSSTLSTYYTSRYRIILTGTPLQNN 697
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 698 LPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLSEEEQL--LVIRRLHKVLR 755
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ R ++ Q +LY+ + ++++ ++ G
Sbjct: 756 PFLLRRLKKDV--EKD------LPDKQERVIKCRFSALQAKLYKQLVTHNKMAVTDGKGG 807
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP +
Sbjct: 808 KTGMRGLSNMLMQLRKLCNHPF---------VFEPVEDQMNPTRMS-------------- 844
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 845 --------NDLLWRTAGKFELLDRVLPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKY 896
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ F G FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 897 LRLDGSTKSDDRSDLLKQFNAPGSEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD 956
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 957 LQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFK 994
>gi|225678325|gb|EEH16609.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides brasiliensis Pb03]
Length = 1391
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 266/518 (51%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 492 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQNGPFLVI 551
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + + VLLTTY+ +
Sbjct: 552 VPLSTLTNWNLEFEKWAPSVSRIVYKGPPTTRKQQQQAIRWGNFQVLLTTYEYI------ 605
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L + + +R+I++GTP+QNN
Sbjct: 606 ------IKDRPVLSKVKWIHMIVDEGHRMKNAGSKLSSTLTQYYTTRYRLILTGTPLQNN 659
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELW L NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 660 LPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQL--LVIRRLHKVLR 717
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ + ++++V+S G
Sbjct: 718 PFLLRRLKKDV--EKD------LPEKQERVIKCRFSALQAKLYKQLVTHNKLVVSDGKGG 769
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP A
Sbjct: 770 KTGMRGLSNMLMQLRKLCNHPF---------VFESVEDEMNPGRAT-------------- 806
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 807 --------NDLIWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKY 858
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ +F G FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 859 LRLDGSTKSDDRSDLLKEFNAPGSEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD 918
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL+T +VEE+I + FK
Sbjct: 919 LQAQDRAHRIGQKNEVRILRLITSNSVEERILERAQFK 956
>gi|255077387|ref|XP_002502335.1| SNF2 super family [Micromonas sp. RCC299]
gi|226517600|gb|ACO63593.1| SNF2 super family [Micromonas sp. RCC299]
Length = 712
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 261/509 (51%), Gaps = 69/509 (13%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSH 366
+Q +G++WL +L+ G GIL D MGLGKT+Q GFL+ L ++ LV+ P + L +
Sbjct: 145 YQLKGVKWLIALYQNGLNGILADQMGLGKTIQTIGFLSHLRSKGILGPYLVIGPLSTLPN 204
Query: 367 WIKELTAVGLSAKIREYFGTC-----VKTRQYELQYVLQDK-GVLLTTYDIVRNNSKSLR 420
W+ E + Y G+ ++ R+ L ++D V++T+++IV + K L+
Sbjct: 205 WVNEFNKFCPEFPVVLYHGSKQERAEIRNRRLPLSTTIKDTFPVIVTSFEIVMADRKFLQ 264
Query: 421 GSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKE 480
+F Y+++DEGH +KN + + L IP+A++++++GTP+QN+L E
Sbjct: 265 KYNF------------KYLVVDEGHRLKNFDCKLIRELKTIPTANKLLLTGTPLQNSLPE 312
Query: 481 LWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLR 540
LW+L +F P++ D F+ ++ D D+E V ++L ++P+ LR
Sbjct: 313 LWSLLHFLLPDVFSDLTQFQNWFDF---SQQDDADGDKEASKRVKVVEKLHGILKPFLLR 369
Query: 541 RLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI--VLSAFDGS---- 594
RLK +V L +K E++++ + Q++ +A +N I VL G
Sbjct: 370 RLKGDV--------ETNLPRKKEIVLYAHMVETQKKFNDALVNKTIADVLKKISGDSGLV 421
Query: 595 PLAALTI------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
P + + L+K C+HP L++ LDG S++ P L E+
Sbjct: 422 PAGSTALNNMLMQLRKNCNHPDLISGG-----LDG--SIMFPSADELVEQCG-------- 466
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRID 708
K + LL KL +GH LIFSQ KML+LI+ + KG K RID
Sbjct: 467 -------------KFRLLDRLLTKLRDKGHKTLIFSQMTKMLDLIESYLEQKGQKVCRID 513
Query: 709 GTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
G+ + +R K +++F +FLL+++ GGLG+ LT AD VI+ D WNP D Q++D
Sbjct: 514 GSVQWQERKKQMDEFNTNPEYGVFLLSTRAGGLGINLTAADTVIIYDSDWNPHQDMQAMD 573
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
R +RIGQ K V V RL T +VE K+ +
Sbjct: 574 RCHRIGQTKPVHVLRLATAHSVEGKMLSR 602
>gi|294659312|ref|XP_461680.2| DEHA2G03102p [Debaryomyces hansenii CBS767]
gi|199433866|emb|CAG90128.2| DEHA2G03102p [Debaryomyces hansenii CBS767]
Length = 1590
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 276/546 (50%), Gaps = 88/546 (16%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL GIL D+MGLGKT+Q L L + I LV+
Sbjct: 692 VGGTLKEYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLIEIKKISGPFLVI 751
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E K Y GT + + + + +LLTT++ +
Sbjct: 752 VPLSTLTNWNIEFEKWAPGVKKITYKGTPTQRKVLQHDVKSGNFQILLTTFEYI------ 805
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN +++ +++L S +R+I++GTP+QNN
Sbjct: 806 ------IKDRNLLSKVKWVHMIIDEGHRMKNANSKLSETLTHHYHSDYRLILTGTPLQNN 859
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L E+ + V + L + ++
Sbjct: 860 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETL--LVIRRLHKVLR 917
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E D L K E +V +++S Q +LY+ L I+ ++ G
Sbjct: 918 PFLLRRLKKDV--EKD------LPNKVEKVVKCKMSSLQSKLYQQMLKYNILYASKPGEG 969
Query: 596 LAALTI---------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
+ I L+KIC+HP V + +++++NP
Sbjct: 970 DKPVLIKNANNQIMQLRKICNHPF---------VYEEVENLINPAS-------------- 1006
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
E +D I +++ LLDK++P+ GH VLIF Q ++++++++ + +G
Sbjct: 1007 -------ETNDQI-WRVAGKFELLDKVLPKFKNSGHRVLIFFQMTQIMDIMEDFLRLRGM 1058
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPA 757
K++R+DG+TKA DR ++ F AP FLL+++ GGLGL L AD VI+ D
Sbjct: 1059 KYMRLDGSTKADDRTGLLKLFN----APNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTD 1114
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTA 808
WNP D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F
Sbjct: 1115 WNPHQDLQAQDRAHRIGQKNEVRILRLITEDSVEEMILERAHAKLEIDGKVIQAGKFDNK 1174
Query: 809 TEHKEQ 814
+ +EQ
Sbjct: 1175 STAEEQ 1180
>gi|449677790|ref|XP_004208925.1| PREDICTED: probable global transcription activator SNF2L2-like
[Hydra magnipapillata]
Length = 1290
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 268/545 (49%), Gaps = 70/545 (12%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVA 359
G +L +Q +GL W+ SL+ GIL D+MGLGKT+Q +A L + + LV+
Sbjct: 416 GGVLKEYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTIALIAYLVEKKKMNGPFLVIL 475
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
P + +S+W+ E S Y G+ RQ Q V+LTTY+ V
Sbjct: 476 PLSTMSNWMLEFEKWAPSIICYSYKGSPQNRRQVSYQIKAGKFNVVLTTYEYV------- 528
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPIQNNL 478
+ D + W YMI+DEGH +KN + + L +A R++++GTP+QN L
Sbjct: 529 -----MKDRSILAKVKWKYMIVDEGHRMKNHHCKLTQVLNTYYAAPFRLLLTGTPLQNRL 583
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYF 538
ELWAL NF P + + F + P +K L+ E+ + + + L + ++P+
Sbjct: 584 PELWALLNFLLPSIFSSSTTFDNWFNTPFQLTGEKVELNEEETL--LIIRRLHKVLRPFL 641
Query: 539 LRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--- 595
LRRLK EV + L +K E IV +++ Q+ LY+ I+L+ DGS
Sbjct: 642 LRRLKKEV--------ESQLPEKVEFIVKCDMSALQKILYKHMQQKGILLT--DGSEKDK 691
Query: 596 ---------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
+ + L+KIC+HP M + ALA L H V
Sbjct: 692 KGHGGTKTLMNTIMQLRKICNHPF----------------MFQHIEVALANHLGYHGGVV 735
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLR 706
+ E+ + +S K + +L KL GH LIF Q + + ++++ + +LR
Sbjct: 736 ----NGSEELNRVSGKFDLLDRILKKLSVCGHRSLIFCQMTQCMTILEDYLTFAKISYLR 791
Query: 707 IDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
+DGTTKA DR +++ F D +P +FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 792 LDGTTKADDRSELLKVFNAKD-SPYQVFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDL 850
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQI 815
Q+ DRA+RIGQ +V V RLMT +VEE I Y+ ++ + G+F + + E+
Sbjct: 851 QAQDRAHRIGQTNEVRVLRLMTVNSVEEHILAAAKYKLNVDSKVIQAGMFNQHSTNAERK 910
Query: 816 RYFSQ 820
+ S+
Sbjct: 911 QMLSK 915
>gi|367000820|ref|XP_003685145.1| hypothetical protein TPHA_0D00680 [Tetrapisispora phaffii CBS 4417]
gi|357523443|emb|CCE62711.1| hypothetical protein TPHA_0D00680 [Tetrapisispora phaffii CBS 4417]
Length = 944
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 170/554 (30%), Positives = 282/554 (50%), Gaps = 68/554 (12%)
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKEL------- 371
G I+ D+MGLGKT+Q + L RLI + ++V P +L+++W EL
Sbjct: 371 GCIMADEMGLGKTLQCITLMWTLLKQGPKGKRLIDKCIIVCPSSLVNNWANELIKWLGPG 430
Query: 372 --TAVGLSAKIREYFGTCVKTRQYELQYVLQDKG------VLLTTYDIVRNNSKSLRGSS 423
T + + K T ++ Q +G VL+ +Y+ +R N L+G
Sbjct: 431 TLTPLAIDGKKSSLANGGNATVSQAVRGWAQARGRNIVKPVLIISYETLRRNVDQLQGCK 490
Query: 424 FISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWA 483
M+ DEGH +KN + +L I R+I+SGTPIQN+L E ++
Sbjct: 491 V------------GLMLADEGHRLKNGESLTFTALNSIDCPRRVILSGTPIQNDLSEYFS 538
Query: 484 LFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLK 543
L NF P LLG F+ +E+PIL G D A D + + G ++L + + +RR
Sbjct: 539 LLNFSNPGLLGTRSEFRRNFEIPILNGRDSEASDEDIKKGERQLQKLSHIVSKFIIRR-T 597
Query: 544 NEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP------LA 597
N++ S L K E ++++ L QR +Y++ + ++ V A S L
Sbjct: 598 NDIL-------SKYLPCKYEHVIFVNLKPFQRDVYKSIIKTKEVAEAVKNSKKGGSMMLR 650
Query: 598 ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHD 657
++ +LKK+C+HP L+ D LD DS++ P+D +I++ A+ D + +
Sbjct: 651 SIGLLKKLCNHPDLINLEEELDNLD--DSLVIPDD--------YNISNAAKSRDVRIE-- 698
Query: 658 NISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDR 716
S K + + L K+ E ++ +++ S + L+LI++ + Y LR+DGT + R
Sbjct: 699 -FSGKFAILERFLHKINTESNDKIVLISNYTQTLDLIEKLCRRRQYGVLRLDGTMNINKR 757
Query: 717 VKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ 775
K+V+ F D IFLL+S+ GG G+ L A+R+I++DP WNP++D Q++ R +R GQ
Sbjct: 758 QKLVDRFNSPDEPEFIFLLSSKAGGCGINLIGANRLILLDPDWNPASDQQALARVWRDGQ 817
Query: 776 KKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSLPKQGF 834
KKD +YR ++ GT+EEK++++Q K L + KE + R FS +L++L L ++
Sbjct: 818 KKDCFIYRFISTGTIEEKVFQRQSMKMSLSSCVVDEKEDVERLFSTDNLKQLFQLNEK-- 875
Query: 835 DVSLTQQQLHEEHG 848
T HE +G
Sbjct: 876 ----TICDTHETYG 885
>gi|34559250|gb|AAQ75381.1| global transcription activator Snf2p [Ogataea angusta]
Length = 1461
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 172/555 (30%), Positives = 274/555 (49%), Gaps = 86/555 (15%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GL W+ SL GIL D+MGLGKT+Q L + + I LV+
Sbjct: 597 VGGTLKEYQLRGLEWMVSLFNNHLNGILADEMGLGKTIQTISLLTYIMEVKKIPGPFLVI 656
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L +W E S K Y G+ ++ + VLLTTY+ V
Sbjct: 657 VPLSTLPNWNLEFDKWAPSLKKISYKGSPQMRKELAYDVRAGNFNVLLTTYEYV------ 710
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D+ W +MI+DEGH +KN ++ + +L E S +R+I++GTP+QNN
Sbjct: 711 ------IKDKYLLSKIKWVHMIIDEGHRMKNTKSKLSSTLTEFYHSDYRLILTGTPLQNN 764
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P++ +K F + + P + L+ + V + L + ++P+
Sbjct: 765 LPELWALLNFVLPKIFNSDKSFDDWFNTPFANTGSQDKLELSEEETLLVIRRLHKVLRPF 824
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFDGSP 595
LRRLK +V +L K E ++ R + Q +LY L N + + +P
Sbjct: 825 LLRRLKKDV--------EKSLPNKIERVIKCRKSGLQTKLYHQMLKYNQLFIGDSDSKAP 876
Query: 596 LA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEK 649
+ L L+KIC+HP V ++ M+NP
Sbjct: 877 VGIKGMNNKLMQLRKICNHPY---------VFPAIEDMINPS------------------ 909
Query: 650 DDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
E +D I ++S LLD+++P+ GH VL+F Q ++++++++ + +G ++
Sbjct: 910 ---HENNDTI-WRVSGKFELLDRILPKFRASGHRVLMFFQMTQIMDIMEDFLRFRGMHYM 965
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
R+DG T+A DR ++ DF D +P +FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 966 RLDGDTRADDRTALLKDFNSED-SPYFVFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD 1024
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLF--KTATEHK 812
Q+ DRA+RIGQK +V + RL+T ++EE I + ++ + G F K+ +E +
Sbjct: 1025 LQAQDRAHRIGQKNEVRILRLITSDSIEEYILERAHQKLDIDGKVIQAGKFDQKSTSEEQ 1084
Query: 813 EQIRYFSQQDLRELL 827
E + LR+LL
Sbjct: 1085 EAL-------LRQLL 1092
>gi|432845796|ref|XP_004065857.1| PREDICTED: transcription activator BRG1-like [Oryzias latipes]
Length = 1660
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 263/545 (48%), Gaps = 70/545 (12%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALVV 358
I L +Q +GL WL SL+ GIL D+MGLGKT+Q + L H RL L++
Sbjct: 793 INGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLII 852
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+W+ E S Y G+ R + Q VLLTTY+ +
Sbjct: 853 VPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYI------ 906
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D+ W YMI+DEGH +KN + + L + R++++GTP+QN
Sbjct: 907 ------IKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNK 960
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P +K L+ E+ I + + L + ++P+
Sbjct: 961 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETI--LIIRRLHKVLRPF 1018
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV A L +K E ++ ++S QR LY ++L+ DGS
Sbjct: 1019 LLRRLKKEV--------EAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLT--DGSEKD 1068
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ + L+KIC+HP M + + +E L
Sbjct: 1069 KKGKGGTKTLMNTIMQLRKICNHPY----------------MFQQIEESFSEHLGFSGGI 1112
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
V D ++ S K + +L KL H VL+F Q ++ ++++ + +K+L
Sbjct: 1113 VQGPDLYR-----ASGKFEVLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRTFKYL 1167
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
R+DGTTKA DR ++ F + IFLL+++ GGLGL L AD V++ D WNP D
Sbjct: 1168 RLDGTTKAEDRGMLLKTFNSPESEYFIFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDL 1227
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQI 815
Q+ DRA+RIGQ+ +V V RL T +VEEKI Y+ +++ + G+F + E+
Sbjct: 1228 QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHER- 1286
Query: 816 RYFSQ 820
R F Q
Sbjct: 1287 RAFLQ 1291
>gi|320581785|gb|EFW96004.1| global transcription activator Snf2p [Ogataea parapolymorpha DL-1]
Length = 1461
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 172/555 (30%), Positives = 274/555 (49%), Gaps = 86/555 (15%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GL W+ SL GIL D+MGLGKT+Q L + + I LV+
Sbjct: 597 VGGTLKEYQLRGLEWMVSLFNNHLNGILADEMGLGKTIQTISLLTYIMEVKKIPGPFLVI 656
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L +W E S K Y G+ ++ + VLLTTY+ V
Sbjct: 657 VPLSTLPNWNLEFDKWAPSLKKISYKGSPQMRKELAYDVRAGNFNVLLTTYEYV------ 710
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D+ W +MI+DEGH +KN ++ + +L E S +R+I++GTP+QNN
Sbjct: 711 ------IKDKYLLSKIKWVHMIIDEGHRMKNTKSKLSSTLTEFYHSDYRLILTGTPLQNN 764
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P++ +K F + + P + L+ + V + L + ++P+
Sbjct: 765 LPELWALLNFVLPKIFNSDKSFDDWFNTPFANTGSQDKLELSEEETLLVIRRLHKVLRPF 824
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFDGSP 595
LRRLK +V +L K E ++ R + Q +LY L N + + +P
Sbjct: 825 LLRRLKKDV--------EKSLPNKIERVIKCRKSGLQTKLYHQMLKYNQLFIGDSDSKAP 876
Query: 596 LA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEK 649
+ L L+KIC+HP V ++ M+NP
Sbjct: 877 VGIKGMNNKLMQLRKICNHPY---------VFPAIEDMINPS------------------ 909
Query: 650 DDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
E +D I ++S LLD+++P+ GH VL+F Q ++++++++ + +G ++
Sbjct: 910 ---HENNDTI-WRVSGKFELLDRILPKFRASGHRVLMFFQMTQIMDIMEDFLRFRGMHYM 965
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
R+DG T+A DR ++ DF D +P +FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 966 RLDGDTRADDRTALLKDFNSED-SPYFVFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD 1024
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLF--KTATEHK 812
Q+ DRA+RIGQK +V + RL+T ++EE I + ++ + G F K+ +E +
Sbjct: 1025 LQAQDRAHRIGQKNEVRILRLITSDSIEEYILERAHQKLDIDGKVIQAGKFDQKSTSEEQ 1084
Query: 813 EQIRYFSQQDLRELL 827
E + LR+LL
Sbjct: 1085 EAL-------LRQLL 1092
>gi|334332813|ref|XP_001368542.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Monodelphis domestica]
Length = 1204
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/585 (29%), Positives = 282/585 (48%), Gaps = 95/585 (16%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR----- 350
+P I L +QREG ++L+ + G+G ILGDDMGLGKT+Q+ FLA + +
Sbjct: 128 IPYTINRYLRDYQREGAQFLYGHYSLGRGCILGDDMGLGKTVQVIAFLAAVLRKKGTRKD 187
Query: 351 --------LIKRA-------------LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCV- 388
L+K L+VAP ++L +W EL G YF +
Sbjct: 188 IENNMPEFLLKNKKKESSISAPKKMFLIVAPLSVLYNWKDELNTWG-------YFKVTIL 240
Query: 389 --KTRQYELQYVLQDKG-VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGH 445
+ EL + Q K + LTTY+ +R D+ + W +I+DE H
Sbjct: 241 HGNKKDNELNRIKQGKCEIALTTYETLR----------LCLDDLNSIE--WSAIIVDEAH 288
Query: 446 LIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYEL 505
IKNP + + + + RI ++GT +QNN+KELW + ++ P LLG +FK+++
Sbjct: 289 RIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAMPGLLGSMTYFKKQFSD 348
Query: 506 PILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMI 565
P+ G A RE G + L ++ +FLRR K + + L KK + +
Sbjct: 349 PVEHGQRHTATKRELATGRKAMQRLARKMSGWFLRRTKTLIKDQ--------LPKKEDRM 400
Query: 566 VWLRLTSCQRQLYEAFLNSE---IVLSAFDGSP-------------------------LA 597
V+ LT Q+ +Y+ L +E ++L A + +
Sbjct: 401 VYCSLTEFQKAVYQTVLETEDVTLILRAREPCTCHSGRKRKNCCYKTNSYGETVKALYFS 460
Query: 598 ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD---FQE 654
L IL+K+ +H LL +A+ + ++ L + ++ D +K F+
Sbjct: 461 YLAILQKVSNHAALL--QASSNTSKQQETHLK----RICNQVFSKFKDFMQKSKDAAFET 514
Query: 655 QHD-NISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKA 713
D S K+ + LL+ VL+FS + K+L+++++ + G + R+DG+TK+
Sbjct: 515 ISDPKYSGKMKVLQQLLNHCKKNRDKVLLFSFSTKLLDVLEQYCMATGLDYRRLDGSTKS 574
Query: 714 SDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRI 773
+RVKIV +F I L+++ GGLGL A+ V++ DP WNP+ D Q++DRAYRI
Sbjct: 575 EERVKIVKEFNSTQDINICLVSTMAGGLGLNFVGANVVVIFDPTWNPANDLQAIDRAYRI 634
Query: 774 GQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
GQ +DV V+RL++ GTVEE +Y +Q++K L + RYF
Sbjct: 635 GQCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYF 679
>gi|448513454|ref|XP_003866958.1| Snf2 protein [Candida orthopsilosis Co 90-125]
gi|380351296|emb|CCG21520.1| Snf2 protein [Candida orthopsilosis Co 90-125]
Length = 1624
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 275/542 (50%), Gaps = 80/542 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL GIL D+MGLGKT+Q L L + I LV+
Sbjct: 755 VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLIEVKKIPGPFLVI 814
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E + K Y GT + + + + + +LLTT++ +
Sbjct: 815 VPLSTVTNWNLEFEKWAPTVKKITYKGTPNQRKAMQHEIKTGNFQILLTTFEYI------ 868
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLL-EIPSAHRIIISGTPIQNN 477
I D+ W +MI+DEGH +KN +++ +++L S +R+I++GTP+QNN
Sbjct: 869 ------IKDKGLLGRVKWVHMIIDEGHRMKNSNSKLSETLTTNYHSDYRLILTGTPLQNN 922
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L E+ + V + L + ++
Sbjct: 923 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETL--LVIRRLHKVLR 980
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E D L K E +V ++++ Q +LY+ L + +
Sbjct: 981 PFLLRRLKKDV--EKD------LPNKVEKVVKCKMSALQSKLYQQMLRYNALYAGDPNDE 1032
Query: 596 LAALTI---------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
A + I LKKIC+HP V + +++ +NP
Sbjct: 1033 TAVVPIKNANNQIMQLKKICNHPF---------VYEDVENFINPTS-------------- 1069
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
+++++ +++ LLDK++P+ GH VLIF Q ++++++++ + +G
Sbjct: 1070 --------ENNDLIWRVAGKFELLDKVLPKFKETGHKVLIFFQMTQVMDIMEDFLRLRGM 1121
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
K +R+DG TKA DR +++ F D FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 1122 KHMRLDGGTKADDRTELLKLFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPH 1181
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHK 812
D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +
Sbjct: 1182 QDLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHAKLEIDGKVIQAGKFDNKSTAE 1241
Query: 813 EQ 814
EQ
Sbjct: 1242 EQ 1243
>gi|336263296|ref|XP_003346428.1| STH1 protein [Sordaria macrospora k-hell]
gi|380089940|emb|CCC12251.1| putative STH1 protein [Sordaria macrospora k-hell]
Length = 1486
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 272/519 (52%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 536 VGGQLKEYQIKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIERKQQNGPYLVI 595
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G + ++ + D VLLTTY+ +
Sbjct: 596 VPLSTLTNWNLEFDKWAPSVSKIVYKGPPNTRKLHQDRIRRGDFQVLLTTYEYI------ 649
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH-RIIISGTPIQNN 477
I D W +MI+DEGH +KN +++ + ++ + S R+I++GTP+QNN
Sbjct: 650 ------IKDRPLLSKIKWFHMIIDEGHRMKNANSKLSATIQQFYSTRFRLILTGTPLQNN 703
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELW++ NF P + K F E + P G DK L E++I V + L + ++
Sbjct: 704 LAELWSMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVLR 761
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ + ++ Q++LY+ + + +I++S G
Sbjct: 762 PFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQQRLYKQMVTHQKILVSDGKGG 813
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
A + L+K+C+HP V D +++ +NP + +
Sbjct: 814 KTGARGLSNMIMQLRKLCNHPF---------VFDEVENQMNPTNTS-------------- 850
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++++++ + +G ++
Sbjct: 851 --------NDLLWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDFLRFRGIQY 902
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
LR+DGTTK+ DR +++ F D +P +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 903 LRLDGTTKSEDRSELLRLFNAPD-SPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 961
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 962 DLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARFK 1000
>gi|313139453|ref|ZP_07801646.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171]
gi|313131963|gb|EFR49580.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171]
Length = 1339
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/568 (30%), Positives = 282/568 (49%), Gaps = 79/568 (13%)
Query: 270 LDDYSDDSVLEDEGSITLSGPR----STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGG 325
LD DD + + L G R STY +P + ++L P+Q EG RWL ++ +G GG
Sbjct: 777 LDHQVDDDAKDASFTAYLDGLRVIDPSTYRVPAALASVLRPYQVEGFRWLNAVCDKGFGG 836
Query: 326 ILGDDMGLGKTMQICGFLAGLF-HSRLIKRA-LVVAPKTLLSHWIKELTAVGLSAKIREY 383
IL D+MGLGK++Q+ L SR R L+V P +L+ +W+ E+ ++
Sbjct: 837 ILADEMGLGKSVQLLSLLLARHKESRAEHRPNLIVCPASLVYNWVAEVAKHTPELRVEAI 896
Query: 384 FGTCVKTRQY--ELQYVLQDKGV----------------------LLTTYDIVRNNSKSL 419
GT + R ++ QD GV L+T+YD++R +
Sbjct: 897 AGTKPERRAMLDGVRAAQQDTGVSPTRESARPASAAAASDDVPDVLVTSYDLLRRDIDDY 956
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
G F M LDE IKN +T+ +K++ + + HR ++GTPI+N L
Sbjct: 957 AGLEFYC------------MTLDEAQYIKNAATKVSKAVRSVTAVHRFALTGTPIENRLS 1004
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
ELW++F+F P +LG F+E++E+P+L G++ K+L+ + P+ L
Sbjct: 1005 ELWSIFDFLMPGMLGSYAHFRERFEMPVLSGDET------------AQKKLQSFVGPFIL 1052
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--EIVLSA----FDG 593
RRLK++V + L K E ++ ++L QR+LY A ++LS F+
Sbjct: 1053 RRLKSQVLKD--------LPDKIENVITVQLQGEQRKLYAALEQQLRSVILSQRPADFNT 1104
Query: 594 SP---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
LA LT L+++C P L+ + A DG S L+ + A+ + ++
Sbjct: 1105 GKIQILAQLTRLRQVCCDPRLIYENA-----DGHASALSAGVQSAAKDPQQSVKQPVKQS 1159
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
+ + S K+ I+ L+D G +LIFSQ L+LI + + + G ++ I G
Sbjct: 1160 --KARKTVSSAKLDAIIELVDSCRDAGRKMLIFSQFTSYLDLIAQRLRADGVEYDMITGA 1217
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T R+++V+ F D P+FL++ + G GL LT A V+ DP WN + +Q+ DRA
Sbjct: 1218 TPKKRRLELVDRFN-ADATPVFLISLKAGNTGLNLTGACVVVHADPWWNAAAQDQATDRA 1276
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
+RIGQ +DV VY+++ T+EE+I Q
Sbjct: 1277 HRIGQTQDVNVYQIVAKDTIEERILNLQ 1304
>gi|378732226|gb|EHY58685.1| DNA repair protein rhp54 [Exophiala dermatitidis NIH/UT8656]
Length = 805
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 175/567 (30%), Positives = 282/567 (49%), Gaps = 62/567 (10%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+R+L+ + KG I+ D+MGLGKT+Q +
Sbjct: 198 PKVPVVIDPRLAKVLRPHQVEGVRFLYRCTTGLVDEKAKGCIMADEMGLGKTLQCITLMW 257
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I + ++ P +L+ +W EL I F K + EL
Sbjct: 258 TLLKQSPEAGKPTIHKCIIACPASLVKNWANELVKWLGEGAIHP-FAIDGKATKEELTMQ 316
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + VL+ +Y+ +R N + LR D M+ DEGH +K
Sbjct: 317 LKQWAMASGRSIARPVLIVSYESLRLNIEELR------------DVKIGLMLCDEGHRLK 364
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N ++ +L + R+I+SGTPIQN+L E ++L +F P LG F++K+ELPIL
Sbjct: 365 NAESETYMALTGLNVDRRVILSGTPIQNDLTEYYSLLDFANPGYLGTKADFRKKFELPIL 424
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D D +K+ G L + + +RR N++ S L K E +V+
Sbjct: 425 RGRDAAGTDTDKQKGVEANAGLGSLVNKFLIRR-TNDIL-------SKYLPVKYEHVVFC 476
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q+ LY F+ S + S G PL A+ ILKK+C+HP LL E L G +
Sbjct: 477 NLAPFQKDLYNHFIQSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLLD---LEKDLPGSE 533
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
P+D ++ A D ++ S K + + +L ++ + ++ +++ S
Sbjct: 534 KFW-PDD---------YVPKEARGRD-RDVRSWYSGKFAVLERMLARIRQDTNDKIVLIS 582
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGL 743
+ L++ ++ S+ Y LR+DGT + R K+V+ F + + +FLL+S+ GG G+
Sbjct: 583 NYTQTLDVFEKLCRSRNYGCLRLDGTMNVNKRQKLVDRFNDPNGEEFVFLLSSKAGGCGI 642
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR M GT+EEKI+++Q K
Sbjct: 643 NLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFMGTGTIEEKIFQRQSHKQA 702
Query: 804 LFKTATEHKEQI-RYFSQQDLRELLSL 829
L T + E + R+F+ LREL
Sbjct: 703 LSSTVVDSAEDVERHFTLDSLRELFQF 729
>gi|298711307|emb|CBJ26552.1| DNA repair and recombination protein RAD54 homolog [Ectocarpus
siliculosus]
Length = 1510
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 182/618 (29%), Positives = 302/618 (48%), Gaps = 86/618 (13%)
Query: 299 KIGNMLFPHQREGLRWLWSL-----HCQGKGGILGDDMGLGKTMQICGFLAGLFHS---- 349
++ L PHQREG+++++ +G G IL DDMGLGKT+Q L L
Sbjct: 189 RLCKFLRPHQREGVQFMFECVMGMREFEGSGCILADDMGLGKTLQSIAVLWTLLKQGKAK 248
Query: 350 --RLIKRALVVAPKTLLSHWIKEL--------TAVGLSAKIREYFGTCVKTRQYELQYVL 399
++RA+VV P +L+ +W E+ + LS RE + + Y
Sbjct: 249 GQPAVRRAVVVCPTSLVKNWEAEIDKWLKGDCRVIALSETTREQVVQSINLFLASMVYR- 307
Query: 400 QDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLL 459
VL+ +Y+ R +SK + D D +I DE H +KN T ++L
Sbjct: 308 ----VLIVSYETFRLHSKRFYAKA---------DTCCDLLICDEAHRLKNAETATNQALS 354
Query: 460 EIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDRE 519
+ R+++SGTP+QN+L+E +A+ +F P +LG F++K+ PIL G + A D++
Sbjct: 355 ALKCRKRVLLSGTPMQNDLEEFYAMTDFTNPGVLGSGSSFRKKFLSPILAGREPSATDKQ 414
Query: 520 KRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYE 579
E+ + + LRR N ++ L K +V RLT Q ++Y+
Sbjct: 415 VERAQKCQNEMSTVVNEFILRRTNN--------INAKHLPPKLVQVVCCRLTPVQTKIYK 466
Query: 580 AFLNSEIVLSAFDGSP---LAALTILKKICDHPLLLTKRAAEDVLDGMDS--------ML 628
L+S+ + +G L+++ ++K+C+HP LL + AA G DS ML
Sbjct: 467 HLLSSKEIRHILNGKQTNILSSIGAMQKLCNHPKLLVEGAA-----GRDSGSHAEIASML 521
Query: 629 NPE---DAALAEKLAMHIADVA-----------EKDDFQEQHDNISCKISFILSLLDKLI 674
E +ALAE + +K F E S K+ + L+ ++
Sbjct: 522 PAETSSSSALAEGVGGRGMSGGGGFGRRSSGGMQKGVFPEW----SGKMETLFRLMREMR 577
Query: 675 PEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQE-GDVAPIF 732
G + +++ S L+LI + F+R+DG+T S R K+VN F E G + F
Sbjct: 578 NTGDDRIVVVSNFTSSLDLIGSMCRENSWPFVRLDGSTGVSKRQKMVNAFNEPGPQSFAF 637
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LL+S+ GG GL L +R+++ DP WNP+ D Q+ R +R GQKK VYR ++ GT+EE
Sbjct: 638 LLSSKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEE 697
Query: 793 KIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE-HGDQH 851
K++++Q+ K GL + + KE++ S +DL++L L T H++ +
Sbjct: 698 KVFQRQLSKEGL-QNIVDDKEEVNSLSSKDLKDLFKL------YEGTPSDTHDKLRCKRC 750
Query: 852 NMDESLEAHIQFLDTLGI 869
N+DE+++A ++ +D G+
Sbjct: 751 NIDEAVQA-VKDIDEAGL 767
>gi|47086607|ref|NP_997881.1| probable global transcription activator SNF2L2 isoform 1 [Danio
rerio]
gi|38173711|gb|AAH60676.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 2 [Danio rerio]
Length = 1568
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 173/554 (31%), Positives = 272/554 (49%), Gaps = 74/554 (13%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH-S 349
+ST+++ G + +Q +GL W+ SL+ GIL D+MGLGKT+Q G + L
Sbjct: 717 QSTFLINGTLKQ----YQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMELK 772
Query: 350 RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
RL L++ P + LS+W+ EL S Y GT R Q VL+TTY
Sbjct: 773 RLNGPYLIIVPLSTLSNWVYELDKWAPSIVKIAYKGTPSMRRSLVPQLRSGKFNVLITTY 832
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRII 468
+ + I D+ W YMI+DEGH +KN + + L + R++
Sbjct: 833 EYI------------IKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLL 880
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
++GTP+QN L ELWAL NF P + F++ + P ++ L+ E+ I + +
Sbjct: 881 LTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETI--LIIR 938
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
L + ++P+ LRRLK EV + L +K E ++ +++ Q+ LY I+L
Sbjct: 939 RLHKVLRPFLLRRLKKEV--------ESQLPEKVEYVIKCDMSAIQKVLYRHMQGKGILL 990
Query: 589 SAFDGSP------------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
+ DGS + + LKKIC+HP M + + A
Sbjct: 991 T--DGSEKDKKGKGGAKTLMNTIMQLKKICNHPY----------------MFQHIEESFA 1032
Query: 637 EKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQES 696
E L ++ D ++ S K + +L KL H VL+F Q ++ ++++
Sbjct: 1033 EHLGFPNGIISGPDLYR-----ASGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDY 1087
Query: 697 IGSKGYKFLRIDGTTKASDRVKIVNDF-QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVD 755
G + + +LR+DGTTK+ DR ++ F +EG IFLL+++ GGLGL L AD V++ D
Sbjct: 1088 FGYRNFLYLRLDGTTKSEDRAMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFD 1147
Query: 756 PAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFK 806
WNP D Q+ DRA+RIGQ+ +V V RL T +VEEKI Y+ +++ + G+F
Sbjct: 1148 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1207
Query: 807 TATEHKEQIRYFSQ 820
+ E+ R F Q
Sbjct: 1208 QKSSSHER-RAFLQ 1220
>gi|268553029|ref|XP_002634497.1| Hypothetical protein CBG08287 [Caenorhabditis briggsae]
Length = 1480
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 260/498 (52%), Gaps = 53/498 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKT 362
L P+Q +GL W+ SL+ GIL D+MGLGKT+Q L L + LV+ P +
Sbjct: 531 LKPYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLLTYLMEVKQNNGPYLVIVPLS 590
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGS 422
LS+W E + K Y GT R+ E Q D VL+TTY+ V KSL G
Sbjct: 591 TLSNWQSEFAKWAPNVKSVIYKGTKDARRRVEGQIRKVDFNVLMTTYEYV-IKEKSLLGK 649
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPIQNNLKEL 481
W YMI+DEGH +KN +++ L A HR++++GTP+QN L EL
Sbjct: 650 -----------IRWKYMIIDEGHRLKNHNSKLTNMLNGFFHAQHRLLLTGTPLQNKLPEL 698
Query: 482 WALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRR 541
WAL NF P + F++ + P +K L++E+ + + + L + ++P+ LRR
Sbjct: 699 WALLNFLLPSIFSSCDTFEQWFNAPFATTGEKVELNQEETM--LIIRRLHKVLRPFLLRR 756
Query: 542 LKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAAL-- 599
LK EV E L K E ++ +++ Q+ +Y + ++L A S +L
Sbjct: 757 LKKEVESE--------LPDKTEYVIKCDMSALQKVIYR-HMKKGLLLDAKASSGARSLSN 807
Query: 600 TI--LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHD 657
TI L+K+C+HP L N ED+ A + +V K+ +
Sbjct: 808 TIVHLRKLCNHPFLFQ---------------NIEDSCRAH---WKVNEVNGKELMR---- 845
Query: 658 NISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRV 717
++ K+ + +L KL GH VL+F Q KM+++ ++ + + Y +LR+DG+TK +R
Sbjct: 846 -VAGKLELLDRILPKLKASGHRVLMFFQMTKMMDIFEDFLHFRNYTYLRLDGSTKPDERG 904
Query: 718 KIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQK 776
+++ + D +F+L+++ GGLGL L AD VI+ D WNP D Q+ DRA+RIGQK
Sbjct: 905 DLLSLYNAPDSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQK 964
Query: 777 KDVVVYRLMTCGTVEEKI 794
K+V V RL+T +VEEK+
Sbjct: 965 KEVRVLRLITANSVEEKM 982
>gi|341899885|gb|EGT55820.1| hypothetical protein CAEBREN_20391 [Caenorhabditis brenneri]
Length = 1499
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 262/499 (52%), Gaps = 55/499 (11%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKT 362
L P+Q +GL W+ SL+ GIL D+MGLGKT+Q L L + LV+ P +
Sbjct: 534 LKPYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLLTYLMEVKQNNGPYLVIVPLS 593
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGS 422
LS+W E + + Y GT R+ E Q D VL+TTY+ V K+L G
Sbjct: 594 TLSNWQSEFAKWAPNVRTVTYKGTKDARRRVEGQIKRVDFNVLMTTYEYV-IKEKTLLGK 652
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE--IPSAHRIIISGTPIQNNLKE 480
W YMI+DEGH +KN ++ + S+L + HR++++GTP+QN L E
Sbjct: 653 -----------IRWKYMIIDEGHRLKNHNS-KLTSMLNGFFHAQHRLLLTGTPLQNKLPE 700
Query: 481 LWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLR 540
LWAL NF P + F++ + P +K L++E+ + + + L + ++P+ LR
Sbjct: 701 LWALLNFLLPSIFSSCDTFEQWFNAPFATTGEKVELNQEETM--LIIRRLHKVLRPFLLR 758
Query: 541 RLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAAL- 599
RLK EV E L K E ++ +++ Q+ +Y + ++L A S +L
Sbjct: 759 RLKKEVESE--------LPDKTEYVIKCDMSALQKVIYR-HMKKGLLLDARASSGARSLS 809
Query: 600 -TI--LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQH 656
TI L+K+C+HP L N ED+ A + +V K+ +
Sbjct: 810 NTIVHLRKLCNHPFLFQ---------------NIEDSCRAH---WKVNEVNGKELMR--- 848
Query: 657 DNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDR 716
++ K+ + +L KL GH VL+F Q KM+++ ++ + + Y +LR+DG+TK +R
Sbjct: 849 --VAGKLELLDRILPKLKATGHRVLMFFQMTKMMDIFEDFLHFRQYTYLRLDGSTKPDER 906
Query: 717 VKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ 775
+++ + D +F+L+++ GGLGL L AD VI+ D WNP D Q+ DRA+RIGQ
Sbjct: 907 GDLLSLYNAPDSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQ 966
Query: 776 KKDVVVYRLMTCGTVEEKI 794
KK+V V RL+T +VEEK+
Sbjct: 967 KKEVRVLRLITANSVEEKM 985
>gi|341877976|gb|EGT33911.1| hypothetical protein CAEBREN_09020 [Caenorhabditis brenneri]
Length = 1499
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 262/499 (52%), Gaps = 55/499 (11%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKT 362
L P+Q +GL W+ SL+ GIL D+MGLGKT+Q L L + LV+ P +
Sbjct: 534 LKPYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLLTYLMEVKQNNGPYLVIVPLS 593
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGS 422
LS+W E + + Y GT R+ E Q D VL+TTY+ V K+L G
Sbjct: 594 TLSNWQSEFAKWAPNVRTVTYKGTKDARRRVEGQIKRVDFNVLMTTYEYV-IKEKTLLGK 652
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE--IPSAHRIIISGTPIQNNLKE 480
W YMI+DEGH +KN ++ + S+L + HR++++GTP+QN L E
Sbjct: 653 -----------IRWKYMIIDEGHRLKNHNS-KLTSMLNGFFHAQHRLLLTGTPLQNKLPE 700
Query: 481 LWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLR 540
LWAL NF P + F++ + P +K L++E+ + + + L + ++P+ LR
Sbjct: 701 LWALLNFLLPSIFSSCDTFEQWFNAPFATTGEKVELNQEETM--LIIRRLHKVLRPFLLR 758
Query: 541 RLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAAL- 599
RLK EV E L K E ++ +++ Q+ +Y + ++L A S +L
Sbjct: 759 RLKKEVESE--------LPDKTEYVIKCDMSALQKVIYR-HMKKGLLLDARASSGARSLS 809
Query: 600 -TI--LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQH 656
TI L+K+C+HP L N ED+ A + +V K+ +
Sbjct: 810 NTIVHLRKLCNHPFLFQ---------------NIEDSCRAH---WKVNEVNGKELMR--- 848
Query: 657 DNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDR 716
++ K+ + +L KL GH VL+F Q KM+++ ++ + + Y +LR+DG+TK +R
Sbjct: 849 --VAGKLELLDRILPKLKATGHRVLMFFQMTKMMDIFEDFLHFRQYTYLRLDGSTKPDER 906
Query: 717 VKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ 775
+++ + D +F+L+++ GGLGL L AD VI+ D WNP D Q+ DRA+RIGQ
Sbjct: 907 GDLLSLYNAPDSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQ 966
Query: 776 KKDVVVYRLMTCGTVEEKI 794
KK+V V RL+T +VEEK+
Sbjct: 967 KKEVRVLRLITANSVEEKM 985
>gi|452981665|gb|EME81425.1| hypothetical protein MYCFIDRAFT_155601 [Pseudocercospora fijiensis
CIRAD86]
Length = 810
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 175/570 (30%), Positives = 277/570 (48%), Gaps = 72/570 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ L PHQ EG+++L+ + +G I+ D+MGLGKT+Q +
Sbjct: 204 PKVPVVIDPRLAQKLRPHQVEGVKFLYKCTTGLIDSNAEGCIMADEMGLGKTLQCITLMW 263
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++ +V P +L+ +W EL L F K + EL
Sbjct: 264 TLLKQSPDAGKSTIQKCIVACPSSLVRNWANELVK-WLGPDAITPFACDGKASKEELTQQ 322
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
++ + VL+ +Y+ +R LR + M+ DEGH +K
Sbjct: 323 MRSWASATGRAVVRPVLIVSYETLRLYVDELRNAPI------------GLMLCDEGHRLK 370
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q ++L + R+I+SGTPIQN+L E +AL +F P LG + F+++YE+PIL
Sbjct: 371 NAESQTFEALTGLNVKKRVILSGTPIQNDLSEYFALLDFANPGYLGTRQEFRKQYEIPIL 430
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D D +++ G KEL + + +RR N++ S L K E +V+
Sbjct: 431 RGRDADGTDADRQKGDERLKELLILVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 482
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + S G PL A+ +LKK+C+HP LL D L G +
Sbjct: 483 NLAPFQLDLYNYFIKSPEIQSLLRGKGSQPLKAIGLLKKLCNHPDLLN---LPDDLPGCE 539
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
AD KD D + S + +LD+++ +
Sbjct: 540 EHFP--------------ADFVPKDARGRDRD-VKPWYSGKMQVLDRMLARIRQDTNDKI 584
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQV 738
++ S + L++ ++ ++ Y LR+DGT + R K+V+ F EGD +FLL+S+
Sbjct: 585 VLISNYTQTLDVFEKLCRNRSYGCLRLDGTMNVNKRQKLVDKFNDPEGDEF-VFLLSSKA 643
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 644 GGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQ 703
Query: 799 IFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 704 SHKQSLSSCVVDSAEDVERHFSLDSLRELF 733
>gi|402218893|gb|EJT98968.1| hypothetical protein DACRYDRAFT_56374 [Dacryopinax sp. DJM-731 SS1]
Length = 1144
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 276/545 (50%), Gaps = 80/545 (14%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVA 359
G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + + L++
Sbjct: 327 GGKLKEYQIKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLVTFLIEKKKQQGPYLIIV 386
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
P + +++W E S K+ + G + + Q + VLLTTY+ +
Sbjct: 387 PLSTITNWSLEFDKWAPSVKLIVFKGPPNQRKMLSSQVRQGNFQVLLTTYEYI------- 439
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNNL 478
I D A W +MI+DEGH +KN ++ +++L++ S +R+I++GTP+QNNL
Sbjct: 440 -----IKDRAALCRPKWVHMIIDEGHRLKNVQSKLSQTLMQFYVSRYRLILTGTPLQNNL 494
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQP 536
ELWAL NF P++ K F E + +P DK L+ E+++ + + L + ++P
Sbjct: 495 PELWALLNFVLPKIFNSVKSFDEWFNMPFANTGSQDKIELNEEEQL--LIIRRLHKVLRP 552
Query: 537 YFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA---FDG 593
+ LRRLK +V E L K E ++ +++S Q +LY + I+ S G
Sbjct: 553 FLLRRLKKDVESE--------LPDKVEKVIKCKMSSLQMKLYNQMKSEGILYSEKTDAKG 604
Query: 594 SPLA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
L A+ L+K+C+HP V D ++ +NP A V
Sbjct: 605 RQLGIKGLSNAIMQLRKLCNHPF---------VFDEVERAINP-------------AGVT 642
Query: 648 EKDDFQEQHDNI---SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+ DNI + K + +L KL+ GH +LIF Q ++++ ++ + KGYK+
Sbjct: 643 D--------DNIWRTAGKFELLDRILPKLLTHGHRMLIFFQMTAIMDIFEDFMRLKGYKY 694
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
LR+DG TK DR ++ F D +P FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 695 LRLDGATKQEDRSSMLQVFNAPD-SPYDTFLLSTRAGGLGLNLQTADTVIIFDSDWNPHA 753
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKE 813
D Q+ DRA+RIGQKK V + RL+T + EE+I + ++ + G F + +E
Sbjct: 754 DLQAQDRAHRIGQKKAVCILRLITSHSFEEEILDRARGKLDIDGKVIQAGRFDNKSTQEE 813
Query: 814 QIRYF 818
+ R+
Sbjct: 814 RERFL 818
>gi|68467034|ref|XP_722432.1| hypothetical protein CaO19.9102 [Candida albicans SC5314]
gi|46444408|gb|EAL03683.1| hypothetical protein CaO19.9102 [Candida albicans SC5314]
Length = 1690
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 276/542 (50%), Gaps = 80/542 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL GIL D+MGLGKT+Q L L + I LV+
Sbjct: 777 VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLVEVKKIPGPFLVI 836
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S K Y GT + + + + ++LTT++ V
Sbjct: 837 VPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQHDIRTGNFQLVLTTFEYV------ 890
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNN 477
I D+ W +MI+DEGH +KN +++ +++L + S +R+I++GTP+QNN
Sbjct: 891 ------IKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGTPLQNN 944
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L E+ + V + L + ++
Sbjct: 945 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETL--LVIRRLHKVLR 1002
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E D L K E +V + ++ Q +LY+ L ++ + +
Sbjct: 1003 PFLLRRLKKDV--EKD------LPNKVEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANG 1054
Query: 596 LAALTI---------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
+TI LKKIC+HP V + +++++NP
Sbjct: 1055 SVPVTIKNANNQIMQLKKICNHPF---------VYEEVENLINPNI-------------- 1091
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
E +D I +++ LLDK++P+ GH VLIF Q +++N++++ + +G
Sbjct: 1092 -------ETNDQI-WRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGM 1143
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
K++R+DG TKA DR ++ F D FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 1144 KYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPH 1203
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHK 812
D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +
Sbjct: 1204 QDLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAE 1263
Query: 813 EQ 814
EQ
Sbjct: 1264 EQ 1265
>gi|327308794|ref|XP_003239088.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS
118892]
gi|326459344|gb|EGD84797.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS
118892]
Length = 808
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 287/568 (50%), Gaps = 64/568 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++L+ G I+ D MGLGKT+Q +
Sbjct: 201 PKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNAHGCIMADGMGLGKTLQCITLMW 260
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYF--GTCVKT------ 390
L +++A++ P TL+ +W EL I + G KT
Sbjct: 261 TLLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELTSQL 320
Query: 391 RQYEL---QYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLI 447
RQ+ + + V+ + VL+ +Y+ +R NS LR D ++ DEGH +
Sbjct: 321 RQWAIASGRSVV--RPVLIVSYETLRMNSDELR------------DTQIGLLLCDEGHRL 366
Query: 448 KNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPI 507
KN +Q +L ++ R+I+SGTPIQN+L E ++L +F P +LG F + YE+PI
Sbjct: 367 KNADSQTYVALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPI 426
Query: 508 LRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVW 567
LRG D D +++ G+ EL + + +RR N++ S L K E +V+
Sbjct: 427 LRGRDADGTDEQQKKGNERLAELLNLVNKFIIRR-SNDLL-------SKYLPVKYEHVVF 478
Query: 568 LRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGM 624
L+ Q LY F+ S + S G PL A+ ILKK+C+HP LL + +ED L G
Sbjct: 479 CNLSPFQLDLYNHFIQSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLL--KLSED-LPGC 535
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIF 683
+ PED M +++ D +E S K+ + +L ++ + ++ +++
Sbjct: 536 EQYF-PED--------MTVSNGRRGD--REAKTWYSGKMMVLDRMLARIRQDTNDKIVLI 584
Query: 684 SQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLG 742
S + L+L + ++ Y +R+DGT R K+V+ F + + +FLL+S+ GG G
Sbjct: 585 SNYTQTLDLFERLCRARAYGCIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCG 644
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
+ L A+R+++ DP WNP+ D Q++ R +R GQ KD VYR + GT+EEKI+++Q K
Sbjct: 645 INLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQ 704
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELLSL 829
L + E + R+FS LREL
Sbjct: 705 SLSSCVIDSAEDVERHFSLDSLRELFQF 732
>gi|238882009|gb|EEQ45647.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida
albicans WO-1]
Length = 1680
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 276/542 (50%), Gaps = 80/542 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL GIL D+MGLGKT+Q L L + I LV+
Sbjct: 769 VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLVEVKKIPGPFLVI 828
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S K Y GT + + + + ++LTT++ V
Sbjct: 829 VPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQHDIRTGNFQLVLTTFEYV------ 882
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNN 477
I D+ W +MI+DEGH +KN +++ +++L + S +R+I++GTP+QNN
Sbjct: 883 ------IKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGTPLQNN 936
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L E+ + V + L + ++
Sbjct: 937 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETL--LVIRRLHKVLR 994
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E D L K E +V + ++ Q +LY+ L ++ + +
Sbjct: 995 PFLLRRLKKDV--EKD------LPNKVEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANG 1046
Query: 596 LAALTI---------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
+TI LKKIC+HP V + +++++NP
Sbjct: 1047 SVPVTIKNANNQIMQLKKICNHPF---------VYEEVENLINPNI-------------- 1083
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
E +D I +++ LLDK++P+ GH VLIF Q +++N++++ + +G
Sbjct: 1084 -------ETNDQI-WRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGM 1135
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
K++R+DG TKA DR ++ F D FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 1136 KYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPH 1195
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHK 812
D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +
Sbjct: 1196 QDLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAE 1255
Query: 813 EQ 814
EQ
Sbjct: 1256 EQ 1257
>gi|198463980|ref|XP_002135618.1| GA28654 [Drosophila pseudoobscura pseudoobscura]
gi|198151489|gb|EDY74245.1| GA28654 [Drosophila pseudoobscura pseudoobscura]
Length = 1677
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 266/533 (49%), Gaps = 76/533 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALVV 358
+ L +Q +GL WL SL+ GIL D+MGLGKT+Q + L +++ L++
Sbjct: 806 VNGQLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPFLII 865
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L +W+ E + + Y G+ R + Q VLLTTY+ V
Sbjct: 866 VPLSTLPNWVLEFEKWAPAVSVVSYKGSPQGRRLLQNQMRATKFNVLLTTYEYV------ 919
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D+A W YMI+DEGH +KN + + L + +R++++GTP+QN
Sbjct: 920 ------IKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNK 973
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P +K L+ E+ I + + L + ++P+
Sbjct: 974 LPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI--LIIRRLHKVLRPF 1031
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV H+ L K E I+ +++ QR LY+ + ++L+ DGS
Sbjct: 1032 LLRRLKKEVEHQ--------LPDKVEYIIKCDMSALQRVLYKHMQSKGVLLT--DGSEKG 1081
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ + L+K+C+HP + A+ EK H
Sbjct: 1082 KHGKGGAKALMNTIVQLRKLCNHPFMF--------------------QAIEEKYCDHTGG 1121
Query: 646 ---VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGY 702
V+ D ++ +S K + +L KL H VL+F Q + + +I++ + + +
Sbjct: 1122 HGVVSGPDLYR-----VSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLSWRQF 1176
Query: 703 KFLRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+LR+DGTTKA DR +++ F +G +FLL+++ GGLGL L AD V++ D WNP
Sbjct: 1177 GYLRLDGTTKAEDRGELLRKFNAKGSDIFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPH 1236
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLF 805
D Q+ DRA+RIGQ+ +V V RLMT +VEE+I Y+ +++ + G+F
Sbjct: 1237 QDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMF 1289
>gi|68466749|ref|XP_722570.1| hypothetical protein CaO19.1526 [Candida albicans SC5314]
gi|46444555|gb|EAL03829.1| hypothetical protein CaO19.1526 [Candida albicans SC5314]
gi|74099650|gb|AAZ99066.1| Swi/Snf core member protein [Candida albicans]
Length = 1690
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 276/542 (50%), Gaps = 80/542 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL GIL D+MGLGKT+Q L L + I LV+
Sbjct: 777 VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLVEVKKIPGPFLVI 836
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S K Y GT + + + + ++LTT++ V
Sbjct: 837 VPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQHDIRTGNFQLVLTTFEYV------ 890
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNN 477
I D+ W +MI+DEGH +KN +++ +++L + S +R+I++GTP+QNN
Sbjct: 891 ------IKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGTPLQNN 944
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L E+ + V + L + ++
Sbjct: 945 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETL--LVIRRLHKVLR 1002
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E D L K E +V + ++ Q +LY+ L ++ + +
Sbjct: 1003 PFLLRRLKKDV--EKD------LPNKVEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANG 1054
Query: 596 LAALTI---------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
+TI LKKIC+HP V + +++++NP
Sbjct: 1055 SVPVTIKNANNQIMQLKKICNHPF---------VYEEVENLINPNI-------------- 1091
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
E +D I +++ LLDK++P+ GH VLIF Q +++N++++ + +G
Sbjct: 1092 -------ETNDQI-WRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGM 1143
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
K++R+DG TKA DR ++ F D FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 1144 KYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPH 1203
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHK 812
D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +
Sbjct: 1204 QDLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAE 1263
Query: 813 EQ 814
EQ
Sbjct: 1264 EQ 1265
>gi|380030205|ref|XP_003698744.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A containing DEAD/H box
1-like isoform 1 [Apis florea]
Length = 830
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 274/524 (52%), Gaps = 55/524 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA----LVVA 359
L P+Q GL WL +H Q GIL D+MGLGKT+Q+ FL L + L L+V
Sbjct: 262 LAPYQMVGLNWLAVMHAQNVNGILADEMGLGKTVQVIAFLTYLKEAGLKGEKDGPHLIVV 321
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV---LQDKGVLLTTYDIVRNNS 416
P + + +W EL K+ +Y+GT + ++ + L D VLLTTY+++ +
Sbjct: 322 PSSTMENWNNELERWSPDLKVVQYYGTQEERKEMRFGWRNGDLDDVDVLLTTYNLISSTP 381
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQN 476
+ R + Y++ DE H++KN T R ++L+ I + HRI+++GTP+QN
Sbjct: 382 EERRLFRVMP---------LYYVVFDEAHMLKNMGTIRYENLVRINAKHRILLTGTPLQN 432
Query: 477 NLKELWALFNFCCPELLGDNK-----WFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
NL EL +L F P L + F + +LP ++ N + L ++++ +A +
Sbjct: 433 NLLELMSLLIFVMPSLFAGKQADLKSLFSKNPKLPSIKKNAEQPLFEQEQVKNA-----K 487
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
+ ++P+ LRRLK EV + L +K E ++ + Q+++Y + +E A
Sbjct: 488 QIMRPFVLRRLKAEVLRD--------LPEKKERMIKCPMIEKQQKMYTNLI-AEFSAEAD 538
Query: 592 DGSPLAALTI---LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
+ + + + L+K+ +HPLL+ + L + + L E + + D+
Sbjct: 539 QSTEVNGIGMMMQLRKLANHPLLVRDYYNKSKLKVISNRLAKEHSYKQKNADYVFEDLQW 598
Query: 649 KDDFQ-EQHDNISCKISFI------------LSLLDKLIP----EGHNVLIFSQTRKMLN 691
D+Q Q I+ + L +LD+L+P EGH VLIFSQ +L+
Sbjct: 599 MSDYQINQLTRTYKSIAGLGLPQELIPQAGKLKILDELLPKLKEEGHRVLIFSQFTMILD 658
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+++E + +G +LR+DG+T +DR ++N + E + IFLL+++ GGLG+ LT AD V
Sbjct: 659 ILEEYLTIRGQTYLRLDGSTPVTDRQCLINQYMEDENIFIFLLSTKAGGLGINLTAADTV 718
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
I+ D +NP D Q+ DR +R+GQK+ V + RL++ T+EE +Y
Sbjct: 719 IIHDIDFNPYNDKQAEDRCHRVGQKRPVSIIRLLSEDTIEEGMY 762
>gi|340518611|gb|EGR48851.1| hypothetical protein TRIREDRAFT_121506 [Trichoderma reesei QM6a]
Length = 1109
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 176/570 (30%), Positives = 282/570 (49%), Gaps = 72/570 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ KI L PHQ EG+++++ + G I+ D+MGLGKT+Q +
Sbjct: 506 PKVPVVIDPKIAKCLRPHQIEGVKFMYKCVTGLVDEKAHGCIMADEMGLGKTLQCITLMW 565
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A+VV P +L+ +W ELT L F K + EL+
Sbjct: 566 TLLKQSPNAGKSTIQKAIVVCPASLVKNWANELTK-WLGPNAINPFAIDGKAPKEELKRQ 624
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + V++ +Y+ +R N + L+ + + DEGH +K
Sbjct: 625 LRQWAIASGRSITRPVIIVSYETLRLNVEELKHTKI------------GLLFCDEGHRLK 672
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + +L ++ + R+I++GTPIQN+L E +AL +F P+LLG F++++E+PIL
Sbjct: 673 NADSNTFNALNDLNVSRRVILTGTPIQNDLTEYFALTSFANPDLLGSRLEFRKRFEIPIL 732
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A + E+R G EL + + +RR N++ S L K E +V+
Sbjct: 733 RGRDADATEEERRRGDECTGELLSVVNKFLIRR-TNDIL-------SKYLPVKYEHVVFC 784
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G +
Sbjct: 785 NLAPFQIDLYNYFITSPDIQALLRGKGSQPLKAINILKKLCNHPDLLN---LSDDLPGSE 841
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
P+D E + + +I S + +LD+++ + +
Sbjct: 842 KCF-PDDYVPKEA--------------RGRDRDIKPWYSGKMQVLDRMLAKIREDTNDKI 886
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQE--GDVAPIFLLTSQV 738
++ S L+L + + Y LR+DGT + R K+V+ F + GD IFLL+S+
Sbjct: 887 VLISNYTSTLDLFERLCRDRQYGCLRLDGTMNVNKRQKLVDRFNDPNGDEF-IFLLSSKA 945
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 946 GGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQ 1005
Query: 799 IFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 1006 SHKQSLSSCVVDSAEDVERHFSLDSLRELF 1035
>gi|340726376|ref|XP_003401535.1| PREDICTED: DNA repair and recombination protein RAD54-like [Bombus
terrestris]
Length = 746
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 174/579 (30%), Positives = 292/579 (50%), Gaps = 103/579 (17%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGK------GGILGDDMGLGKTMQICGFLAGLFHS---- 349
+ N+L PHQREG+++++ GK G I+ D+MGLGKT+Q L L
Sbjct: 148 LCNILRPHQREGVKFMYEC-VTGKRIEGAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 206
Query: 350 -RLIKRALVVAPKTLLSHWIKELTA--------------------VGLSAKIREYFGTCV 388
LI++A++VAP +L+ +W E+ L+ ++ Y C+
Sbjct: 207 KPLIEKAIIVAPSSLVKNWYNEIFKWLKNRVQPLAIDGGNKVDIDTKLTGFMKTYGRRCI 266
Query: 389 KTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
+L+ +Y+ R +++ L DE G ++ DEGH +K
Sbjct: 267 NP-------------ILIISYETFRLHAQVLH-----QDEVG-------LVLCDEGHRLK 301
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N Q ++L+ + + R+++SGTPIQN+L E ++L +F LLG + F++K+E+PIL
Sbjct: 302 NSENQTYQALINLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPIL 361
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK----KNEM 564
RG D A D E+++ EL + +RR +SA LSK K E+
Sbjct: 362 RGQDAAATDTERKLAQERLAELVSIVNKCLIRR------------TSALLSKYLPLKYEL 409
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLSAFDG-----------SPLAALTILKKICDHPLLLT 613
+V +R+ Q LY +F+ S+ V + + S LAA+T+LKK+C HP L+
Sbjct: 410 VVCIRMGKLQTDLYNSFIQSDSVRKSMEENSANSKKGKSFSTLAAITLLKKLCCHPDLVY 469
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
+ E DG ++ A KL + + +E +S K+ + LL +
Sbjct: 470 DKILEKS-DGFEN---------AAKL------MPPNYNTKEIMPELSGKLMVLDCLLASI 513
Query: 674 IPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-I 731
++ +++ S + L+L ++ + Y ++R+DGT R K+V F + + I
Sbjct: 514 KTTTNDKIVLVSNYTQTLDLFEKLCHKRCYNYVRLDGTMTIKKRSKVVEKFNDPNSNDFI 573
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
F+L+S+ GG GL L A+R+++ DP WNP+ D+Q++ R +R GQKK +YR + GT+E
Sbjct: 574 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKLCFIYRFLCTGTIE 633
Query: 792 EKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
EKI+++Q K L T + +E + R+F+ DLR+L L
Sbjct: 634 EKIFQRQAHKKALSSTVVDQEEDVARHFTLNDLRDLFKL 672
>gi|296814920|ref|XP_002847797.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS
113480]
gi|238840822|gb|EEQ30484.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS
113480]
Length = 819
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 176/568 (30%), Positives = 286/568 (50%), Gaps = 64/568 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++L+ G I+ D MGLGKT+Q +
Sbjct: 212 PKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNASGCIMADGMGLGKTLQCITLMW 271
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYF--GTCVKT------ 390
L +++A++ P TL+ +W EL I + G KT
Sbjct: 272 TLLKQSPEAGKSTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELISQL 331
Query: 391 RQYEL---QYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLI 447
RQ+ + + V+ + VL+ +Y+ +R NS LR D ++ DEGH +
Sbjct: 332 RQWAIASGRSVV--RPVLIVSYETLRMNSDELR------------DTQIGLLLCDEGHRL 377
Query: 448 KNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPI 507
KN +Q +L ++ R+I+SGTPIQN+L E ++L +F P +LG F + YE+PI
Sbjct: 378 KNADSQTYVALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPI 437
Query: 508 LRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVW 567
LRG D + +++ G+ EL + + +RR N++ S L K E +V+
Sbjct: 438 LRGRDADGTEEQQKKGNERLAELLNLVNKFIIRR-SNDLL-------SKYLPVKYEHVVF 489
Query: 568 LRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGM 624
L Q LY F+ S + S G PL A+ ILKK+C+HP LL + +ED L G
Sbjct: 490 CNLAPFQLDLYNHFIQSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLL--KLSED-LPGC 546
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIF 683
+ PED A + + D +E S K+ + +L ++ + ++ +++
Sbjct: 547 EKYF-PEDMASSN---------GRRGD-REVKSWYSGKMMVLDRMLARIRQDTNDKIVLI 595
Query: 684 SQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLG 742
S + L+L + S+GY +R+DGT R K+V+ F + + +FLL+S+ GG G
Sbjct: 596 SNYTQTLDLFERLCRSRGYGCIRLDGTMGVKKRSKLVDRFNDPNGEEFVFLLSSKAGGCG 655
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
+ L A+R+++ DP WNP+ D Q++ R +R GQ KD VYR + GT+EEKI+++Q K
Sbjct: 656 INLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQ 715
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELLSL 829
L + E + R+FS LREL
Sbjct: 716 SLSSCVVDSAEDVERHFSLDSLRELFQF 743
>gi|299755187|ref|XP_001828488.2| SNF2-family ATP dependent chromatin remodeling factor snf21
[Coprinopsis cinerea okayama7#130]
gi|298411108|gb|EAU93321.2| SNF2-family ATP dependent chromatin remodeling factor snf21
[Coprinopsis cinerea okayama7#130]
Length = 1471
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 266/545 (48%), Gaps = 78/545 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA---- 355
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L +KR
Sbjct: 577 VGGTLKEYQLKGLQWMVSLYNNKLNGILADEMGLGKTIQTISLITFLIE---VKRQRGPY 633
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
LV+ P + +++W E + Y G + R + + VLLTTY+ +
Sbjct: 634 LVIVPLSTMTNWSGEFAKWAPQVRTISYKGNPQQRRMIQQEMRAGQFQVLLTTYEYI--- 690
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPI 474
I D W +MI+DEGH +KN ++ A++L S +R+I++GTP+
Sbjct: 691 ---------IKDRPILSKIKWVHMIIDEGHRMKNTQSKLAQTLTTYYHSRYRLILTGTPL 741
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGN--DKHALDREKRIGSAVAKELRE 532
QNNL ELWAL NF P++ K F E + P DK L+ E+ + + K L +
Sbjct: 742 QNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANSGTGDKIELNEEEAL--LIIKRLHK 799
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD 592
++P+ LRRLK +V E L K E ++ +R+++ Q QLY+ +++
Sbjct: 800 VLRPFLLRRLKKDVESE--------LPDKVEKVIKVRMSALQSQLYKQMKKHKMIADGNK 851
Query: 593 GSPLAA---------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHI 643
+ + L L+KIC HP L E V D M NP + KL
Sbjct: 852 DNKGKSGGIKGLSNELMQLRKICQHPFLF-----ESVEDKM----NP-SGWIDNKLI--- 898
Query: 644 ADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYK 703
S K+ + +L K GH VLIF Q K+++++++ + G+K
Sbjct: 899 --------------RASGKVELLSRILPKFFATGHRVLIFFQMTKVMDIMEDFLKFMGWK 944
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVA-PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+LR+DG TK +R + V F D +F+L+++ GGLGL L AD VI+ D WNP
Sbjct: 945 YLRLDGGTKTEERAQFVQLFNSKDSEYMVFILSTRAGGLGLNLQTADTVIIFDSDWNPHA 1004
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKE 813
D Q+ DRA+RIGQ + V++ R +T +VEE +Y++ ++ + G F + +E
Sbjct: 1005 DLQAQDRAHRIGQTRAVLILRFITEKSVEEAMYQRARYKLDIDDKVIQAGRFDNKSTQEE 1064
Query: 814 QIRYF 818
Q +
Sbjct: 1065 QEEFL 1069
>gi|254574520|ref|XP_002494369.1| Catalytic subunit of the SWI/SNF chromatin remodeling complex
involved in transcriptional regulation [Komagataella
pastoris GS115]
gi|238034168|emb|CAY72190.1| Catalytic subunit of the SWI/SNF chromatin remodeling complex
involved in transcriptional regulation [Komagataella
pastoris GS115]
gi|328353801|emb|CCA40198.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 2/4 [Komagataella pastoris
CBS 7435]
Length = 1649
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 179/555 (32%), Positives = 284/555 (51%), Gaps = 87/555 (15%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G +L +Q +GL+W+ SL GIL D+MGLGKT+Q L L + I LV+
Sbjct: 741 VGGVLKEYQVKGLQWMVSLFNNKLNGILADEMGLGKTIQTISLLTYLVEKKNIPGPFLVI 800
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S K Y G + + + VLLTTY+ +
Sbjct: 801 VPLSTLTNWNSEFDKWAPSLKKITYKGNPQFRKTVQADIRAKKFQVLLTTYEYI------ 854
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN +++ + +L + S +R+I++GTP+QN+
Sbjct: 855 ------IKDRPLLSKVKWVHMIIDEGHRMKNANSKLSSTLTQYYHSDYRLILTGTPLQNS 908
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P +DK AL E+ + V + L + ++
Sbjct: 909 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGSHDKIALSEEETL--LVIRRLHKVLR 966
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN-SEIVLSAFDGS 594
P+ LRRLK +V E D L +K E +V + ++ Q +LYE L +++ +
Sbjct: 967 PFLLRRLKKDV--EKD------LPEKIEKVVKCKSSALQIKLYEQMLKYNQLFVGDESKK 1018
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
P+ L L+KIC+HP V + +++++NP
Sbjct: 1019 PIGVKGLNNKLMQLRKICNHPF---------VFEEVENLINPT----------------- 1052
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+E ++NI ++S LLD+++P+ GH VLIF Q ++++++++ + + K+
Sbjct: 1053 ----RETNNNI-WRVSGKFELLDRILPKFKATGHRVLIFFQMTQIMDIMEDFLRLRDMKY 1107
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG TK+ DR ++ F EG FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 1108 LRLDGATKSDDRQDMLRLFNAEGSDYFAFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQD 1167
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLF--KTATEHK 812
Q+ DRA+RIGQK +V + RL+T ++EE I K ++ + G F K+ E +
Sbjct: 1168 LQAQDRAHRIGQKNEVRILRLITEDSIEEVILSKAYEKLDIDGKVIQAGRFDNKSTAEEQ 1227
Query: 813 EQIRYFSQQDLRELL 827
E I LR+LL
Sbjct: 1228 EAI-------LRQLL 1235
>gi|189211141|ref|XP_001941901.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977994|gb|EDU44620.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 812
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 179/566 (31%), Positives = 287/566 (50%), Gaps = 64/566 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++L+ + + G I+ D+MGLGKT+Q +
Sbjct: 202 PRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCIALMW 261
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL--- 395
L I++ ++ P +L+ +W EL L F K + EL
Sbjct: 262 TLLKQSPEAGKSTIQKCVIACPSSLVRNWANELIK-WLGKDAVTPFAIDGKASKEELIQQ 320
Query: 396 --QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
Q+ + + VL+ +Y+ +R +DE G M+ DEGH +K
Sbjct: 321 IRQWSIASGRSVVRPVLIVSYETLR----------LYADEFGQTPI--GLMLCDEGHRLK 368
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + +L + R+I+SGTPIQN+L E +AL NF P LG F++ YE+PIL
Sbjct: 369 NGDSLTFTALNNLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKHYEIPIL 428
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
+G D + D + + G+ EL + + +RR N++ S L K E +V+
Sbjct: 429 KGRDANGTDEDVKKGTERLTELLGLVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 480
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q+ LY F+ S V S G PL + +LKK+C+HP LL ED L G +
Sbjct: 481 NLAPFQKDLYNHFIKSPDVQSLLRGKGSQPLKVIGMLKKLCNHPDLLN--LPED-LPGCE 537
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
+ L P+D +K D +D +E S K++ + +L ++ E ++ +++ S
Sbjct: 538 NTL-PDD--FVQK------DARGRD--REVKTWYSGKMAVLDRMLARIRAETNDKIVLIS 586
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLG 742
+ L++ S+GY R+DGT S R K+V+ F + + +P +FLL+S+ GG G
Sbjct: 587 NYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLVDKFNDPE-SPEFVFLLSSKAGGCG 645
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
L L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR +T GT+EEK++++Q K
Sbjct: 646 LNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQ 705
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELL 827
L + E + R+FS LREL
Sbjct: 706 SLSSCVVDSAEDVERHFSLDSLRELF 731
>gi|341878788|gb|EGT34723.1| hypothetical protein CAEBREN_12212 [Caenorhabditis brenneri]
Length = 970
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 183/561 (32%), Positives = 293/561 (52%), Gaps = 69/561 (12%)
Query: 266 LVNVLDDYSD--DSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGK 323
L +L+D D +V +D T GP +L K G L +Q G++WL ++ +
Sbjct: 351 LSRILEDCKDHAKTVTKDFERCT-EGPLDLKLL--KEGCTLHDYQLVGVKWLIMMNSKEL 407
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREY 383
ILGD+MGLGKT+QI FL+ L L+V P + + +WI E S K+ Y
Sbjct: 408 NAILGDEMGLGKTIQIVAFLSYLKQIGKTGPHLIVVPSSTIENWIGEFHKWCPSLKLLTY 467
Query: 384 FGTCVKTRQYELQYVLQDKG---VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
+G+ R++ V + K V+LTTY++V + S D+ + +Y+I
Sbjct: 468 YGS-QDERKHLRHRVKKQKDNIDVILTTYNMVTSKS---------DDKKFFKNFSLNYVI 517
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
DEGH++KN ++R + L+++ +I+++GTP+QNNL EL +L F ++ NK+ +
Sbjct: 518 YDEGHMLKNCDSERYRGLMKVKGKRKILLTGTPLQNNLIELISLMYFVLFKVF--NKYCE 575
Query: 501 EKYEL--------PILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDV 552
+ L P L DK A+ ++ RI +E + +QPY LRRLKN+V
Sbjct: 576 DITHLLQHFKQLGPALESKDK-AMYQQDRI-----EEAKSILQPYILRRLKNQVL----- 624
Query: 553 TSSATLSKKNEMIVWLRLTSCQRQLY----EAFLNSEIVLSAFDGSPLAALTILKKICDH 608
++L KK+E I+ + + Q+ LY E NSE V G +L L++ +H
Sbjct: 625 ---SSLPKKSEQIIEVEMKKPQKALYDNIVEVLQNSEDV-----GDSYGSLMRLRQAANH 676
Query: 609 PLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA-DVAEKDDFQEQH--DNISCKISF 665
PLL + LD + L + + A+K H++ D+A D + + C F
Sbjct: 677 PLLRRSEYTDQKLDKIAKQLCLREKSYADKKWQHVSEDLAWLSDIKIHQLCEKFRCTSKF 736
Query: 666 ILS-----------LLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
+L+ LDK++PE G VLIFSQ ML++++ + +GY + R+DG
Sbjct: 737 LLNEELALRSGKCEQLDKMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQ 796
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T DR +++N+F +FLL+++ GGLG+ LT A+ +I+ D +NP D Q+ DR
Sbjct: 797 TPVLDRQEMINEFNLSKDLFVFLLSTKAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRC 856
Query: 771 YRIGQKKDVVVYRLMTCGTVE 791
+R+GQ+KDV V RL++ GTVE
Sbjct: 857 HRMGQEKDVHVTRLVSKGTVE 877
>gi|388581680|gb|EIM21987.1| DNA supercoiling [Wallemia sebi CBS 633.66]
Length = 806
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 170/557 (30%), Positives = 289/557 (51%), Gaps = 67/557 (12%)
Query: 300 IGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLAGLFHSRLI-- 352
+ +L PHQ EG+++L+ +G I+ D+MGLGKT+Q L L I
Sbjct: 213 LSKVLRPHQVEGVKFLYRCTTGLTAPDAQGCIMADEMGLGKTLQCIALLWTLLKQSPIPG 272
Query: 353 ----KRALVVAPKTLLSHWIKELT------AVGLSAKIREYFGTCVKTRQYELQYVLQD- 401
++ ++V P +L+ +W E T AVG A ++ GT + Q+
Sbjct: 273 KPTVEKCIIVCPSSLVPNWANEFTKWLGTGAVGCMAV--DHKGTKEQLISDVKQWCAASG 330
Query: 402 ----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKS 457
+ V++ +Y+ +RN ++ + G + + M+LDEGH +KN + K+
Sbjct: 331 RSVTQPVMIVSYETLRNLTEVI-GRAQVG-----------LMMLDEGHRMKNSESMTFKA 378
Query: 458 LLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALD 517
L EI R+I+SGTPIQN+L E ++L NF P+ LG+ F++ +E ILRG D A D
Sbjct: 379 LTEIHCKRRVILSGTPIQNDLSEYFSLLNFANPDYLGNKNEFRKNFENIILRGRDALATD 438
Query: 518 REKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQL 577
+EK++ KEL + + +RR N++ S L K E +V+ L+ Q L
Sbjct: 439 KEKQMSEEKLKELNMAVSKFIIRR-TNDIL-------SKFLPVKYEHVVFTALSPLQLDL 490
Query: 578 YEAFLNS---EIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAA 634
Y+ F+ S + +L PL A+ ILKK+C+HP ++++P+D
Sbjct: 491 YKFFIESPETQALLKGKASQPLKAIGILKKLCNHP----------------NLISPKDDI 534
Query: 635 LAEKLAMHIADVAEK-DDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNL 692
K+ + ++AE+ D + + S K+ ++ ++++ + +++ S + L+L
Sbjct: 535 PGSKVLLPEENIAERLDKKRPANPAWSGKMMVLMRFIERMRKNSDDKIVLVSNYTQTLDL 594
Query: 693 IQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRV 751
+++ + + F+R+DGT R K+V+ F + + IFLL+S+ GG GL L A+R+
Sbjct: 595 LEKLFAALRWGFMRLDGTMAVKKRGKLVDRFNDPESREFIFLLSSKAGGCGLNLIGANRL 654
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEH 811
I+ DP WNP+ D Q++ R +R GQKK+ VYR + GT+EE++ +Q +K L +
Sbjct: 655 ILFDPDWNPAADQQALARVWRDGQKKECFVYRFIGTGTLEEQVLMRQAYKQSLSACVVDE 714
Query: 812 KEQI-RYFSQQDLRELL 827
E R+FS+ LREL
Sbjct: 715 AEDADRHFSKDLLRELF 731
>gi|302673648|ref|XP_003026510.1| hypothetical protein SCHCODRAFT_258840 [Schizophyllum commune H4-8]
gi|300100193|gb|EFI91607.1| hypothetical protein SCHCODRAFT_258840 [Schizophyllum commune H4-8]
Length = 1361
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 165/540 (30%), Positives = 267/540 (49%), Gaps = 77/540 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA---- 355
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L +KR
Sbjct: 481 VGGTLKEYQLKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLITFLIE---VKRQRGPY 537
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
LV+ P + +++W E + K+ Y G + R + + + VLLTTY+ +
Sbjct: 538 LVIVPLSTMTNWAGEFAKWAPAVKVISYKGNPAQRRALQGELRNSNFQVLLTTYEYI--- 594
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPI 474
I D W +MI+DEGH +KN ++ +++L S +R+I++GTP+
Sbjct: 595 ---------IKDRPHLSKLRWVHMIIDEGHRMKNTQSKLSQTLTTYYRSNYRLILTGTPL 645
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGN--DKHALDREKRIGSAVAKELRE 532
QNNL ELW+L NF P++ K F E + P DK L+ E+ + + + L +
Sbjct: 646 QNNLPELWSLLNFVLPKVFNSVKSFDEWFNTPFANAGTGDKIELNEEEAL--LIIRRLHK 703
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD 592
++P+ LRRLK +V E L K E ++ +R+++ Q QLY+ +++ +
Sbjct: 704 VLRPFLLRRLKKDVESE--------LPDKQEKVIKVRMSALQSQLYKQMKKYKMIANGKG 755
Query: 593 GSPLAA--------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA 644
L L+KIC HP L + EDV++ + EK+
Sbjct: 756 KGQSTGGVKGLSNELMQLRKICQHPFLFDE--VEDVVNTTQ--------LIDEKIIRS-- 803
Query: 645 DVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKF 704
S K+ + +L KL H VLIF Q K+++++++ + G+K+
Sbjct: 804 ---------------SGKVELLSRILPKLFATDHRVLIFFQMTKVMDIMEDFLKMMGWKY 848
Query: 705 LRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG TK +R V F D +F+L+++ GGLGL L AD VI+ D WNP D
Sbjct: 849 LRLDGGTKTEERASYVQLFNAKDSDIRVFILSTRAGGLGLNLQTADTVIIFDSDWNPHAD 908
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKEQ 814
Q+ DRA+RIGQ K V++ R +T +VEE +Y++ ++ + G F + +EQ
Sbjct: 909 LQAQDRAHRIGQTKAVLILRFITEKSVEEAMYQRARYKLDIDGKVIQAGRFDNKSSQEEQ 968
>gi|402080120|gb|EJT75265.1| DNA repair protein rhp54 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 810
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 285/571 (49%), Gaps = 74/571 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ ++ +L PHQ EG+++++ C + G I+ D+MGLGKT+Q
Sbjct: 207 PRVPVVIDPRLTKVLRPHQIEGVKFMY--RCVTGMIDEKANGCIMADEMGLGKTLQCITL 264
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
L L I++A+V P +L+ +W EL L A F K + EL
Sbjct: 265 LWTLLKQSPEAGKSTIQKAIVACPSSLVRNWANELVK-WLGADAITPFAIDGKASKEELT 323
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N + L+ + M+ DEGH
Sbjct: 324 RQLRQWAISSGRAVTRPVIIVSYETLRLNVEELKHTQI------------GLMLCDEGHR 371
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN +Q +L + R+I+SGTPIQN+L E ++L +F P LLG F++++E+
Sbjct: 372 LKNGDSQTFTALNNLNVTRRVILSGTPIQNDLSEYFSLISFANPALLGTRLEFRKRFEIA 431
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D A + E+ G KEL + + +RR N++ S L K E +V
Sbjct: 432 ILRGRDADATESERAKGDERLKELLGIVNKFIIRR-TNDIL-------SKYLPVKYEHVV 483
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q LY F+ S + + G PL A+ ILKK+C+HP LL +ED L G
Sbjct: 484 FCNLAPFQLDLYNLFIRSPEIQALLRGKGSQPLKAINILKKLCNHPDLLN--LSED-LPG 540
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GH 678
++ PED D + + +I S + +LD+++
Sbjct: 541 CENWF-PEDYV--------------PKDSRGRDRDIKPWYSGKMQVLDRMLARIRADTND 585
Query: 679 NVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGD-VAPIFLLTSQ 737
+++ S L++ ++ S+GY LR+DGT + R K+V+ F + + +FLL+S+
Sbjct: 586 KIVLISNYTSTLDIFEKLCRSRGYGNLRLDGTMNVTKRQKLVDRFNDPEGTEFVFLLSSK 645
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
GG G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR +T G++EEKI+++
Sbjct: 646 AGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGSIEEKIFQR 705
Query: 798 QIFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
Q K L + E + R+FS L+EL
Sbjct: 706 QSHKQSLSSCVVDSAEDVERHFSLDSLKELF 736
>gi|412985746|emb|CCO16946.1| SNF2 family helicase/ATPase PasG [Bathycoccus prasinos]
Length = 795
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 268/547 (48%), Gaps = 74/547 (13%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSH 366
+Q G++WL SL G GIL D MGLGKT+Q GFL+ L + LVV P + LS+
Sbjct: 232 YQLRGVKWLISLWSNGLNGILADQMGLGKTIQTIGFLSHLRSKGICGPFLVVGPLSTLSN 291
Query: 367 WIKELTAVGLSAKIREYFGT------CVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLR 420
WI E + Y G+ TR V + V++T+++I + K L+
Sbjct: 292 WINEFKKFCPAFPTVLYHGSKQERANIRNTRMPVRSVVDETFPVIVTSFEIAMFDRKFLQ 351
Query: 421 GSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKE 480
F Y+I+DEGH +KN + + L IP+A++++++GTP+QNNL E
Sbjct: 352 KYQF------------KYLIVDEGHRLKNFDCKLIRELKIIPAANKLLLTGTPLQNNLPE 399
Query: 481 LWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLR 540
LW+L +F P++ FK ++ + +RE++ + V +L ++P+ LR
Sbjct: 400 LWSLLHFLLPDVFSSLDQFKSWFDFSEELDDKVEFAEREQQRRAKVISKLHGILKPFLLR 459
Query: 541 RLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI--VLSAFDGS---P 595
RLK +V +L +K E+IV+ +T Q++ +A ++ I +L G P
Sbjct: 460 RLKGDV--------EISLPRKKEIIVYASMTETQKKFNDAMVDKTIEDMLKKEAGGNRVP 511
Query: 596 LAALTI------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEK 649
+ + + L+K C+HP L++ LDG S++ P AE+L
Sbjct: 512 VGSTALNNMLMQLRKNCNHPDLISGG-----LDG--SIMFPS----AEELVAQCG----- 555
Query: 650 DDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDG 709
K+ + LL L GH LIFSQ +ML+L++ +G + RIDG
Sbjct: 556 ------------KMQLLDRLLTSLRKSGHKTLIFSQMTRMLDLLESFFEQRGERVCRIDG 603
Query: 710 TTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDR 769
+ K R ++ F + IFLL+++ GGLG+ LT AD VI+ D WNP D Q++DR
Sbjct: 604 SVKQEQRRDAIDAFNKDPTVDIFLLSTRAGGLGINLTAADTVIIYDSDWNPHADMQAMDR 663
Query: 770 AYRIGQKKDVVVYRLMTCGTVEEKI---------YRKQIFKGGLFKTATEHKEQIRYFSQ 820
+RIGQ K V VYRL T +VE K+ K + G K T ++ S
Sbjct: 664 VHRIGQTKPVHVYRLATANSVEGKMLSRAASKLKLEKLVISGANLKQGTTKQKSTESMST 723
Query: 821 QDLRELL 827
++L +LL
Sbjct: 724 EELVQLL 730
>gi|390936110|ref|YP_006393669.1| putative ATP-dependent helicase [Bifidobacterium bifidum BGN4]
gi|389889723|gb|AFL03790.1| putative ATP-dependent helicase [Bifidobacterium bifidum BGN4]
Length = 1299
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 283/568 (49%), Gaps = 79/568 (13%)
Query: 270 LDDYSDDSVLEDEGSITLSGPR----STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGG 325
LD DD + + L G R STY +P + ++L P+Q EG RWL ++ +G GG
Sbjct: 737 LDHQVDDDAKDASFTAYLDGLRVIDPSTYRVPAALASVLRPYQVEGFRWLNAVCDKGFGG 796
Query: 326 ILGDDMGLGKTMQICGFLAGLF-HSRLIKRA-LVVAPKTLLSHWIKELTAVGLSAKIREY 383
IL D+MGLGK++Q+ L SR R L+V P +L+ +W+ E+ ++
Sbjct: 797 ILADEMGLGKSVQLLSLLLARHKESRAEHRPNLIVCPASLVYNWVAEVAKHTPELRVEAI 856
Query: 384 FGTCVKTRQY--ELQYVLQDKGV----------------------LLTTYDIVRNNSKSL 419
GT + R ++ QD GV L+T+YD++R +
Sbjct: 857 AGTKPERRAMLDGVRAAQQDTGVSPTRESARPASAAAASDDVPDVLVTSYDLLRRDIDDY 916
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
G F M LDE IKN +T+ +K++ + + HR ++GTPI+N L
Sbjct: 917 AGLEFYC------------MTLDEAQYIKNAATKVSKAVRSVTAVHRFALTGTPIENRLS 964
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
ELW++F+F P +LG F+E++E+P+L G++ K+L+ + P+ L
Sbjct: 965 ELWSIFDFLMPGMLGSYAHFRERFEMPVLSGDET------------AQKKLQSFVGPFIL 1012
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF---LNSEIVL---SAFDG 593
RRLK++V + L K E ++ ++L QR+LY A L S I+ + F+
Sbjct: 1013 RRLKSQVLKD--------LPDKIENVITVQLQGEQRKLYAALEQQLRSVILRQRPADFNT 1064
Query: 594 SP---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
LA LT L+++C P L+ + A DG S L+ + A+ + ++
Sbjct: 1065 GKIQILAQLTRLRQVCCDPRLIYENA-----DGHASALSAGVQSAAKDPQQSVKQPVKQS 1119
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
+ + S K+ I+ L+D G +LIFSQ L+LI + + + G ++ I G
Sbjct: 1120 --KARKTVSSAKLDAIIELVDSCRDAGRKMLIFSQFTSYLDLIAQRLRADGVEYDMITGA 1177
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T R+++V+ F D P+FL++ + G GL LT A V+ DP WN + +Q+ DRA
Sbjct: 1178 TPKKRRLELVDRFN-ADATPVFLISLKAGNTGLNLTGACVVVHADPWWNAAAQDQATDRA 1236
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
+RIGQ +DV VY+++ T+EE+I Q
Sbjct: 1237 HRIGQTQDVNVYQIVAKDTIEERILNLQ 1264
>gi|452821607|gb|EME28635.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 1026
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 275/553 (49%), Gaps = 77/553 (13%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA- 355
P + + P+Q EGL +L L+ G GIL D+MGLGKT+Q LA L R I
Sbjct: 134 PYNVKGTMRPYQLEGLNFLIGLYEHGLNGILADEMGLGKTLQTISLLAFLRGYRHINGPH 193
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVL-QDKGVLLTTYDIVRN 414
L++ PK+ + +W E S I + G + Q +L +D V LTTY++
Sbjct: 194 LIIVPKSTIGNWALEFDKWCPSFNILRFHGNQDDRANLKEQRLLSKDFDVCLTTYEVAIK 253
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
SLR +W Y+I+DE H IKN ++ ++ + S R++++GTP+
Sbjct: 254 EKNSLRR------------FMWRYVIIDEAHRIKNENSILSQVVRTFESQSRLLLTGTPL 301
Query: 475 QNNLKELWALFNFCCPELLGD----NKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
QNNL ELWAL NF P++ + WF + ++++A + V ++L
Sbjct: 302 QNNLHELWALLNFLLPDIFASAEDFDSWFSS------VESDNENA-------KNEVIQQL 348
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI-VLS 589
++P+ +RRLK+EV H+ L K E +++ +L+S Q +Y L +I ++
Sbjct: 349 HAVLRPFLIRRLKSEVEHD--------LPPKKETVLFTKLSSVQLDIYRNLLKKDIDAIN 400
Query: 590 AFDGSPLAALTIL---KKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
G + L IL +K C+HP L DG+ ED +L
Sbjct: 401 GPGGDRVRLLNILMQLRKCCNHPYLF---------DGV------EDRSL----------- 434
Query: 647 AEKDDFQEQHDNISC-KISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQE--SIGSKGYK 703
D F E H SC K+ + LL +L H VLIFSQ +ML+++++ S + Y
Sbjct: 435 ---DPFGE-HVIESCGKLMLLDKLLSRLRRGNHKVLIFSQMTRMLDILEDYCSPNMRDYP 490
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+ RIDG T+ R ++ +F D IFLL+++ GGLG+ L AD VI+ D WNP
Sbjct: 491 YCRIDGNTEGEIRDSMIEEFNRPDSDKFIFLLSTRAGGLGINLAAADTVILYDSDWNPQV 550
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQD 822
D Q++DRA+RIGQK V VYRL++ TVEE+I RK + K L + + Q
Sbjct: 551 DLQAMDRAHRIGQKNPVNVYRLISENTVEERILRKALEKLKLDSLVIQQGRLVDQKKQLG 610
Query: 823 LRELLSLPKQGFD 835
ELL + + G D
Sbjct: 611 KDELLDMIRYGAD 623
>gi|91089209|ref|XP_967093.1| PREDICTED: similar to helicase [Tribolium castaneum]
gi|270012470|gb|EFA08918.1| hypothetical protein TcasGA2_TC006624 [Tribolium castaneum]
Length = 871
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 279/527 (52%), Gaps = 77/527 (14%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGL---FHSRLIKRALVVAPKTL 363
+Q GL WL LH Q GIL D+MGLGKT+Q+ FLA L F ++ LVV P +
Sbjct: 326 YQMVGLNWLAVLHAQRVNGILADEMGLGKTVQVIAFLAYLKETFQAQ--NTHLVVVPSST 383
Query: 364 LSHWIKELTAVGLSAKIREYFGTCVKTRQYELQY---VLQDKGVLLTTYDIVRNNS---K 417
L +W E ++ Y+G+ + R + + + +L D V+LTTY +V N+ K
Sbjct: 384 LDNWRSEFARWCPQLRVFMYYGSTEERRGFRVDFAKGILADFDVILTTYSLVGNSPEERK 443
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
R + Y+I DE H++KN +TQR ++L+ I + HRI+++GTP+QNN
Sbjct: 444 MFRVTPM------------HYVIFDEAHMLKNMNTQRYENLIRINAKHRILLTGTPLQNN 491
Query: 478 LKELWALFNFCCPELLGD---------NKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
L EL +L F P++ + K K K L ++ +++ KRI
Sbjct: 492 LLELMSLLIFVMPKMFAEKTEDLKSLFQKTSKSKQTDDTLPPFEREQIEQAKRI------ 545
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
++P+ LRRLK +V + L KK + ++ + + Q++ YEA + S
Sbjct: 546 -----MKPFVLRRLKCDVLQD--------LPKKIDHVMKVPMAPTQKEQYEALVASYQNA 592
Query: 589 -----SAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHI 643
SA++G ++ +T L+K+ +HPLLL E + M +L D + + +I
Sbjct: 593 AVEEESAYNG--MSIMTDLRKLSNHPLLLRYHYDEHQIREMAKLL-VRDPTYKDTVEEYI 649
Query: 644 A-DVAEKDDFQ-----------EQH---DNI---SCKISFILSLLDKLIPEGHNVLIFSQ 685
D+ DF+ E++ DN+ S K ++ +L +L GH VLIFSQ
Sbjct: 650 VQDLLFMSDFEINKLTKIHRCLERYMLPDNLILTSGKFLYLDKILAELKQNGHRVLIFSQ 709
Query: 686 TRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTL 745
MLN++++ + + +K+LR+DG+T ++R +V+++ + IFLL+++ GGLG+ L
Sbjct: 710 YVIMLNVMEDYLKIRKHKYLRMDGSTPVNERQDLVDEYMGDNSIFIFLLSTRAGGLGINL 769
Query: 746 TKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
T AD VI+ D +NP D Q+ DR +R+GQ + V VYRL++ GT+EE
Sbjct: 770 TSADTVIIHDIDFNPYNDKQAEDRCHRMGQTRPVTVYRLVSQGTIEE 816
>gi|56474875|gb|AAV91782.1| Brg1 [Xenopus laevis]
Length = 1600
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 260/530 (49%), Gaps = 69/530 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALVV 358
+ +L +Q +GL WL SL+ GIL D+MGLGKT+Q + L H R+ L++
Sbjct: 735 VNGILKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLII 794
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+W+ E G S Y G+ R + VLLTTY+ +
Sbjct: 795 VPLSTLSNWVYEFDKWGPSVVKVSYKGSPAARRAFVPMLRSGKFNVLLTTYEYI------ 848
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D+ W YMI+DEGH +KN + + L + R++++GTP+QN
Sbjct: 849 ------IKDKQILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNK 902
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P +K L+ E+ I + + L + ++P+
Sbjct: 903 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETI--LIIRRLHKVLRPF 960
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV A L +K E ++ +++ QR LY ++L+ DGS
Sbjct: 961 LLRRLKKEV--------EAQLPEKVEYVIKCDMSALQRVLYRHMQGKGVLLT--DGSEKD 1010
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ + L+KI +HP M + + +E L
Sbjct: 1011 KKGKGGTKTLMNTIMQLRKISNHPY----------------MFQQIEESFSEHLGFTGGI 1054
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
V +D ++ S K + +L KL H VL+F Q ++ ++++ +G+K+L
Sbjct: 1055 VQGQDVYR-----ASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRGFKYL 1109
Query: 706 RIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
R+DGTTKA DR ++ F E G IFLL+++ GGLGL L AD V++ D WNP D
Sbjct: 1110 RLDGTTKADDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDL 1169
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLF 805
Q+ DRA+RIGQ+ +V V RL T +VEEKI Y+ +++ + G+F
Sbjct: 1170 QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF 1219
>gi|212534456|ref|XP_002147384.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces marneffei ATCC
18224]
gi|210069783|gb|EEA23873.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces marneffei ATCC
18224]
Length = 808
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 175/571 (30%), Positives = 281/571 (49%), Gaps = 70/571 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++L+ G I+ D+MGLGKT+Q +
Sbjct: 201 PKVPVVIDPRLSKILRPHQIEGVKFLYRCTTGMIDENANGCIMADEMGLGKTLQCISLMW 260
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L +++ ++ P TL+ +W EL L F K + EL
Sbjct: 261 TLLKQSPEAGRTTVQKCVIACPSTLVRNWANELVK-WLGPDAVTPFVIDGKATKAELSSQ 319
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + VL+ +Y+ +R N + L+ D ++ DEGH +K
Sbjct: 320 LKQWAIASGRSIVRPVLIVSYETLRLNVEDLK------------DTPIGLLLCDEGHRLK 367
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + K L + + R+I+SGTPIQN+L E +AL +F P LLG F++K+E+PIL
Sbjct: 368 NKESLTWKELNSLNVSRRVILSGTPIQNDLSEYFALVHFANPNLLGSQNEFRKKFEIPIL 427
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A D +++ G EL + + +RR N++ S L K E +V+
Sbjct: 428 RGRDAAASDEDRKKGDERLSELSAIVNKFIIRR-TNDIL-------SKYLPIKYEHVVFC 479
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L+ Q LY FL+S + S G PL A+ +LKK+C+HP LL A D L G +
Sbjct: 480 NLSEFQLNLYNHFLSSPEIRSLLRGKGSQPLKAIGLLKKLCNHPDLLD--LARD-LPGCE 536
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
P+D D + + +I S + +LD+++ +
Sbjct: 537 QYF-PDDYV--------------PPDGRGRDRDIKSWYSGKMMVLDRMLARIRQDTNDKI 581
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
++ S + L+L ++ S+ Y LR+DGT + R K+V+ F + + IFLL+S+ G
Sbjct: 582 VLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNDPNGEEFIFLLSSKAG 641
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++Q
Sbjct: 642 GCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQS 701
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
K L + E + R+FS LREL
Sbjct: 702 HKQSLSSCVVDSAEDVERHFSLDSLRELFQF 732
>gi|358385618|gb|EHK23214.1| hypothetical protein TRIVIDRAFT_220490 [Trichoderma virens Gv29-8]
Length = 802
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 174/570 (30%), Positives = 280/570 (49%), Gaps = 72/570 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ KI L PHQ EG+++++ + G I+ D+MGLGKT+Q +
Sbjct: 199 PKVPVVIDPKIAKCLRPHQIEGVKFMYKCVTGQVDEKAHGCIMADEMGLGKTLQCITLMW 258
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A+VV P +L+ +W ELT L F K + E++
Sbjct: 259 TLLKQSPNAGKSTIQKAIVVCPASLVKNWANELTK-WLGPNAINPFAIDGKAPKEEMKRQ 317
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + V++ +Y+ +R N + L+ + + DEGH +K
Sbjct: 318 LRQWAIASGRSITRPVIIVSYETLRVNVEELKHTKV------------GLLFCDEGHRLK 365
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + +L ++ R+I++GTPIQN+L E +AL NF P+LLG F++++E+PIL
Sbjct: 366 NADSTTFSALNDLNVTRRVILTGTPIQNDLTEYFALTNFANPDLLGSRLEFRKRFEIPIL 425
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D +A + E++ G EL + + +RR + + S L K E +V+
Sbjct: 426 RGRDANASEHERQRGDECTGELLGIVNRFLIRRTNDLL--------SKYLPVKYEHVVFC 477
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G +
Sbjct: 478 NLAPFQIDLYNYFITSPNIQALLRGKGSQPLKAINILKKLCNHPDLLN---LSDDLPGSE 534
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
PED E + + +I S + +LD+++ + +
Sbjct: 535 KCF-PEDYVPKEA--------------RGRDRDIKPWYSGKMQVLDRMLAKIREDTNDKI 579
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQE--GDVAPIFLLTSQV 738
++ S L+L + + Y LR+DGT + R K+V+ F + GD IFLL+S+
Sbjct: 580 VLISNYTSTLDLFERLCRERQYGSLRLDGTMTVNKRQKLVDRFNDPNGDEF-IFLLSSKA 638
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG G+ L A+R+++ DP WNP+ D Q++ R +R GQ KD VYR + GT+EEKI+++Q
Sbjct: 639 GGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQTKDCFVYRFIATGTIEEKIFQRQ 698
Query: 799 IFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 699 SHKQSLSSCVVDSAEDVERHFSLDSLRELF 728
>gi|254583686|ref|XP_002497411.1| ZYRO0F04906p [Zygosaccharomyces rouxii]
gi|238940304|emb|CAR28478.1| ZYRO0F04906p [Zygosaccharomyces rouxii]
Length = 848
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 177/592 (29%), Positives = 292/592 (49%), Gaps = 90/592 (15%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLW--------------SLHCQG------------K 323
P ++ K+ +L PHQ EG+R+L+ L +G
Sbjct: 223 PNIPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDKELVTKGVENTTQEVNRGAY 282
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKEL------- 371
G I+ D+MGLGKT+Q + L RLI + ++V P +L+++W EL
Sbjct: 283 GCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELDKWLGPG 342
Query: 372 --TAVGLSAKIREY-----FGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSF 424
+ + + K G Q + + ++ K VL+ +Y+ +R N+ L+ +
Sbjct: 343 TLSPLAIDGKKSSLNNGSVSGAIHSWAQAQGRNIV--KPVLIISYETLRRNTDQLKNCNV 400
Query: 425 ISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWAL 484
M+ DEGH +KN + SL I + R+I+SGTPIQN+L E +AL
Sbjct: 401 ------------GLMLADEGHRLKNADSLTFTSLDSIDCSRRVILSGTPIQNDLSEYFAL 448
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKN 544
NF P LLG F++ +E+PIL+ D A D + R G +L + + +RR N
Sbjct: 449 LNFSNPGLLGSRSEFRKNFEIPILKSRDADATDEDVRKGQEKLSQLSYVVSKFIIRR-TN 507
Query: 545 EVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG----SPLAALT 600
++ + L K E ++++ LT QR+LY+ + S V G PL A+
Sbjct: 508 DIL-------AKYLPCKYEHVIFVNLTPFQRELYKKNVESRDVKKLVKGVGGTQPLKAIG 560
Query: 601 ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNIS 660
+LKK+C+HP L+ + ++ +D + P+D K + D Q ++ S
Sbjct: 561 LLKKLCNHPDLVD---FNEEIENLDEISIPDDYEWNSK----------RKDLQVKY---S 604
Query: 661 CKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKI 719
K S + L K+ E + ++I S + L+LI++ K Y +R+DGT + R K+
Sbjct: 605 SKFSILERFLAKIRSESDDKIVIISNYTQTLDLIEKLCRQKRYGSVRLDGTMGINKRQKL 664
Query: 720 VNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKD 778
V+ F + + +FLL+S+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKKD
Sbjct: 665 VDRFNDPEGQEFVFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKD 724
Query: 779 VVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
+YR ++ G++EEKIY++Q K L + KE + R FS +L++L
Sbjct: 725 CFIYRFISTGSIEEKIYQRQSMKLSLSSCVVDAKEDVERLFSADNLKQLFQF 776
>gi|302406510|ref|XP_003001091.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Verticillium albo-atrum VaMs.102]
gi|261360349|gb|EEY22777.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Verticillium albo-atrum VaMs.102]
Length = 1392
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 273/519 (52%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L +L LV+
Sbjct: 497 VGGKLKEYQIKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIERKLQDGPYLVI 556
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + + VLLTTY+ +
Sbjct: 557 VPLSTLTNWTLEFEKWAPSVTKIVYKGPPNARKQQQDKIRQGRFQVLLTTYEYI------ 610
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN +++ ++ + + R+I++GTP+QNN
Sbjct: 611 ------IKDRPILSKIKWFHMIIDEGHRMKNQNSKLTATIQQYYHTRFRLILTGTPLQNN 664
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWA+ NF P + K F E + P G DK L E++I V + L + ++
Sbjct: 665 LTELWAMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMDLTEEEQI--LVIRRLHKVLR 722
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + +++IV+S G
Sbjct: 723 PFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQTKLYKQMVTHNKIVVSDGQGG 774
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
A + L+K+C+HP V +++++NP ++I+D
Sbjct: 775 KTGARGLSNMIMQLRKLCNHPF---------VFGEVENVMNP----------LNISD--- 812
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
D + + + LLD+++P+ GH VL+F Q +++++++ + + Y++
Sbjct: 813 --------DKL-WRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDYLRYRNYQY 863
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+R+DGTTK+ +R ++ DF D +P +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 864 MRLDGTTKSDERSDLLKDFNAPD-SPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 922
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 923 DLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFK 961
>gi|386815601|ref|ZP_10102819.1| SNF2-related protein [Thiothrix nivea DSM 5205]
gi|386420177|gb|EIJ34012.1| SNF2-related protein [Thiothrix nivea DSM 5205]
Length = 1143
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 271/551 (49%), Gaps = 100/551 (18%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKR 354
LP + L P+Q EGL WL L GIL DDMGLGKT+Q L S RL +
Sbjct: 669 LPEGLNADLRPYQHEGLNWLQFLREYQFNGILADDMGLGKTLQTLAHLLLEKQSGRLQEP 728
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
ALVVAP +L+ +W +E +++ GT + R ++ D ++LTTY ++
Sbjct: 729 ALVVAPTSLMGNWRREAARFTPDLRVQIIHGTD-RHRHFD---SFGDYDLILTTYPLM-- 782
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+ DE I+ Y+ILDE IKN + + + + + + HR+ ++GTP+
Sbjct: 783 ----------VRDEEQYLKHIFHYLILDEAQAIKNAAARTTQIIYGLKANHRLCLTGTPL 832
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
+N+L ELW++F+F P LG + F + PI + D DR+ +LR+R+
Sbjct: 833 ENHLGELWSMFHFLMPGFLGQHDKFTRLFRTPIEKQGDG---DRQW--------QLRKRV 881
Query: 535 QPYFLRRLKNEVFHE----DDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF-------LN 583
QP+ LRR K V HE D+ SATL K QR LYE +
Sbjct: 882 QPFMLRRTKELVAHELPPKSDIIRSATLEGK------------QRDLYETVRLAMDKKVQ 929
Query: 584 SEIVLSAFDGSP---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
EI F S L AL L+++C P L+ A+ V
Sbjct: 930 DEISRKGFARSQIMILDALLKLRQVCCDPRLVKLEKAQKV-------------------- 969
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK 700
S K+ +++LL +++ EG VL+FSQ ML LI+E +
Sbjct: 970 -----------------KQSAKLELLMTLLPEMLEEGRKVLLFSQFTSMLALIEEELEKA 1012
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
G + ++ G TK D + FQEGD A +FL++ + GG GL LT AD VI DP WNP
Sbjct: 1013 GIVYSKLTGQTKNRDEA--IAAFQEGD-AKVFLISLKAGGTGLNLTAADTVIHYDPWWNP 1069
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY----RKQIFKGGLFKTATEHKEQIR 816
+ + Q+ DRA+RIGQ K V VY+L+T TVEEKI +KQ GL+ + +E +E +
Sbjct: 1070 AVEQQATDRAHRIGQDKPVFVYKLITEDTVEEKILKLQEKKQALADGLY-SDSETREGV- 1127
Query: 817 YFSQQDLRELL 827
+FS DL +LL
Sbjct: 1128 HFSSDDLMDLL 1138
>gi|328874980|gb|EGG23345.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
Length = 937
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 279/543 (51%), Gaps = 52/543 (9%)
Query: 304 LFPHQREGLRWLWSLHC------QGKGGILGDDMGLGKTMQICGFLAGLFHS-----RLI 352
L PHQR+G+++++ +G G IL DDMGLGK++Q L L
Sbjct: 293 LRPHQRQGVQFMFDCLLGFRGGYKGNGCILADDMGLGKSIQAIAILWTLLKQGPNGLPTA 352
Query: 353 KRALVVAPKTLLSHWIKELTA-VGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDI 411
+RA++VAP +L+ +W KEL +G K G+ R + L K VL+ +YD
Sbjct: 353 ERAVIVAPSSLVGNWCKELKKWLGEGIKPVAIGGSTKYGRARLAELELGTKDVLVISYDQ 412
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
+R + + S I +I DEGH +KNP + K++ IP+ R+I+SG
Sbjct: 413 LRIYCEEIIKISSIG-----------LVICDEGHRLKNPEIKTTKAVSMIPTPRRVILSG 461
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
TPIQN+L E +A+ NF P +L + F+ Y+ PIL + A D +KR+G + EL
Sbjct: 462 TPIQNDLNEFFAMVNFVNPGVLKNMSTFQNVYDAPILASRNPDASDEDKRLGRERSAELT 521
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--EIVLS 589
Q + LRR + L KK E V+++L+ Q ++Y+ +++
Sbjct: 522 RLTQQFILRRTA--------AVNVQYLPKKIEYTVFIKLSPLQHKIYKHLVDTIKNQQFG 573
Query: 590 AFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEK 649
F G+ L +T LKK+ + P L+ ED DS+L K+
Sbjct: 574 NFSGA-LPLITTLKKLTNCPELIYLPDKEDPTQVNDSVLKLFPKEWNPKV---------- 622
Query: 650 DDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRID 708
FQ Q+ S K+ F+ LL + + V+I S + L ++ + ++GY+F ++D
Sbjct: 623 --FQPQY---SGKLQFVDKLLAGIRKTSKDRVVIISNYTQTLTVLAGMMRTRGYEFFQLD 677
Query: 709 GTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSV 767
G+T +R K+V+ F + +FLL+S+ GG+GL L A+ +++ DP WNP+ D Q++
Sbjct: 678 GSTSVDNRQKMVDLFNDPSRNEFVFLLSSKAGGVGLNLIGANHLVLYDPDWNPANDLQAM 737
Query: 768 DRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE-HKEQIRYFSQQDLREL 826
R +R GQKK V +YR ++ GT+EEKI+++QI K L + E + F +DL+++
Sbjct: 738 ARVWREGQKKVVSIYRTLSTGTIEEKIFQRQITKMALSTSVVEGDSDNAPAFETKDLKDI 797
Query: 827 LSL 829
+L
Sbjct: 798 FNL 800
>gi|399218244|emb|CCF75131.1| unnamed protein product [Babesia microti strain RI]
Length = 910
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 257/519 (49%), Gaps = 79/519 (15%)
Query: 306 PHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLL 364
P+Q EGL+WL L+ G GIL D+MGLGKT Q LA L SR I+ L++APK+ +
Sbjct: 66 PYQLEGLKWLVGLYDSGLNGILADEMGLGKTFQTISLLAFLKESRGIEGPHLILAPKSTI 125
Query: 365 SHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD-----KGVLLTTYDIVRNNSKSL 419
+W+ EL S + ++ G R+ Q + + V +T+Y+ L
Sbjct: 126 GNWMNELKRFCPSLRCLKFLGN----REERSQMIATELDPTKYNVFVTSYETCCKAKGPL 181
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
S W+Y+I+DE H IKN ++ + + + + +R++I+GTP+QNNLK
Sbjct: 182 NRIS------------WNYIIIDEAHRIKNELSKLSVVVRSLSTEYRLLITGTPLQNNLK 229
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
ELWAL NF PE+ ++ F+E + DREK + K L ++P+ L
Sbjct: 230 ELWALLNFLFPEIFSSSEEFEEMFNFTAAESMQNE--DREKH-NLEIVKRLHAILRPFML 286
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG------ 593
RR K +V + + KNEM++ + L Q++LY+ L + + D
Sbjct: 287 RRAKKDVLQD--------MPSKNEMLLMIPLRGIQKRLYQDLLRKNALDVSHDNGNEYIN 338
Query: 594 ----SPLAALTI------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHI 643
+P + + + L+K C+HP L ++
Sbjct: 339 LNSQNPTSNVQLLNLAMQLRKACNHPYLFEGYENRNL----------------------- 375
Query: 644 ADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYK 703
D F E + K+ + LL +L EG L+FSQ +ML+++++ +GY
Sbjct: 376 ------DPFGEHLVEAAGKLKVLDKLLSRLYEEGSRALLFSQMTRMLDILEDYCRMRGYS 429
Query: 704 FLRIDGTTKASDRVKIVNDF-QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+ RIDG T+ DR ++++ +EG +FLL+++ GGLG+ L A+ V++ D WNP
Sbjct: 430 YFRIDGNTETHDRDYQISEYNKEGSTVFLFLLSTRAGGLGINLASANVVVLYDSDWNPQV 489
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+VDRA+RIGQ + V VYRL+ T+EEK+ + K
Sbjct: 490 DLQAVDRAHRIGQTRPVSVYRLVHEHTIEEKVIERATLK 528
>gi|350424065|ref|XP_003493677.1| PREDICTED: DNA repair and recombination protein RAD54-like [Bombus
impatiens]
Length = 748
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 175/579 (30%), Positives = 293/579 (50%), Gaps = 103/579 (17%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGK------GGILGDDMGLGKTMQICGFLAGLFHS---- 349
+ N+L PHQREG+++++ GK G I+ D+MGLGKT+Q L L
Sbjct: 150 LCNILRPHQREGVKFMYEC-VTGKRIEGAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 208
Query: 350 -RLIKRALVVAPKTLLSHWIKELTA--------------------VGLSAKIREYFGTCV 388
LI++A++VAP +L+ +W E+ L+ ++ Y C+
Sbjct: 209 KPLIEKAIIVAPSSLVKNWYNEIFKWLKNRVQPLAIDGGNKTDIDTKLTGFMKTYGRRCI 268
Query: 389 KTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
+L+ +Y+ R +++ L DE G ++ DEGH +K
Sbjct: 269 NP-------------ILIISYETFRLHAQVLH-----QDEVG-------LVLCDEGHRLK 303
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N Q ++L+ + + R+++SGTPIQN+L E ++L +F LLG + F++K+E+PIL
Sbjct: 304 NSENQTYQALINLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPIL 363
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK----KNEM 564
RG D A D E+++ EL + +RR +SA LSK K E+
Sbjct: 364 RGQDAAATDTERKLAQERLAELVSIVNKCLIRR------------TSALLSKYLPLKYEL 411
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLSAFDG-----------SPLAALTILKKICDHPLLLT 613
+V +R+ Q LY +F+ S+ V + + S LAA+T+LKK+C HP L+
Sbjct: 412 VVCIRMGKLQTDLYNSFIQSDSVRKSMEENSANSKKGKSFSTLAAITLLKKLCCHPDLVY 471
Query: 614 KRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKL 673
+ E DG E+AA + + + K+ E +S K+ + LL +
Sbjct: 472 DKILEKS-DGF------ENAA-----KLMPPNYSTKEIMPE----LSGKLMVLDCLLASI 515
Query: 674 IPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-I 731
++ +++ S + L+L ++ + Y ++R+DGT R K+V F + + I
Sbjct: 516 KTTTNDKIVLVSNYTQTLDLFEKLCHKRCYNYVRLDGTMTIKKRSKVVEKFNDPNSNDFI 575
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
F+L+S+ GG GL L A+R+++ DP WNP+ D+Q++ R +R GQKK +YR + GT+E
Sbjct: 576 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKLCFIYRFLCTGTIE 635
Query: 792 EKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
EKI+++Q K L T + +E + R+F+ DLR+L L
Sbjct: 636 EKIFQRQAHKKALSSTVVDQEEDVARHFTLNDLRDLFKL 674
>gi|297816734|ref|XP_002876250.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322088|gb|EFH52509.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 2043
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 184/561 (32%), Positives = 279/561 (49%), Gaps = 77/561 (13%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
Y L ++ L +Q+EG+ WL L GIL DDMGLGKT+Q +A R
Sbjct: 1433 YKLCTELKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGS 1492
Query: 352 -----IKRALVVAPKTLLSHWIKELTA-VGLSA-KIREYFGTCVKTRQYELQYVLQDKGV 404
+ +++V P TL+ HW E+ + LS + +Y G+ V+ R L+ + V
Sbjct: 1493 TDEPDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGS-VQDR-VSLREQFNNHNV 1550
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
++T+YD+VR + L S W+Y ILDEGH+IKN ++ ++ ++ +
Sbjct: 1551 IITSYDVVRKDVDYLTQFS------------WNYCILDEGHIIKNAKSKITSAVKQLKAQ 1598
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
HR+I+SGTPIQNN+ ELW+LF+F P LG + F+ Y P+L D ++ G
Sbjct: 1599 HRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGV 1658
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEAF 581
+ L +++ P+ LRR K EV LS E I+ + L+ Q +LYE F
Sbjct: 1659 LAMEALHKQVMPFLLRRTKEEV-----------LSDLPEKIIQDRYCDLSPVQLKLYEQF 1707
Query: 582 LNS----EI-VLSAFDGSP----------------LAALTILKKICDHPLL-LTKRAAED 619
S EI + DGS AL L K+C HPLL L + E
Sbjct: 1708 SGSGAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEP 1767
Query: 620 VLDGMDSMLNPEDAALAE--KLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
V + +M+N + E K+ VA ++ +E C I S D + G
Sbjct: 1768 VASDLSAMINGCSDIITELHKVQHSPKLVALQEILEE------CGIGSDASSSDGTLSVG 1821
Query: 678 -HNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
H VLIF+Q + +L++I++ + K ++R+DG+ R +IV F + L
Sbjct: 1822 QHRVLIFAQHKALLDIIEKDLFQTHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLL 1881
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDN------QSVDRAYRIGQKKDVVVYRLMTC 787
LT+ VGGLGL LT AD ++ ++ WNP D+ Q++DRA+R+GQK+ V V+RL+
Sbjct: 1882 LTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQVNKLWQAMDRAHRLGQKRVVNVHRLIMR 1941
Query: 788 GTVEEKIYRKQIFKGGLFKTA 808
GT+EEK+ Q FK + T
Sbjct: 1942 GTLEEKVMSLQRFKVSVANTV 1962
>gi|121712712|ref|XP_001273967.1| RSC complex subunit (Sth1), putative [Aspergillus clavatus NRRL 1]
gi|119402120|gb|EAW12541.1| RSC complex subunit (Sth1), putative [Aspergillus clavatus NRRL 1]
Length = 1379
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 165/518 (31%), Positives = 265/518 (51%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GL+W+ SL+ GIL D+MGLGKT+Q + + + LV+
Sbjct: 528 VGGKLKEYQIRGLQWMISLYNNNLNGILADEMGLGKTIQTISLITHIIEKKKNNGPFLVI 587
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + Q + VLLTTY+ +
Sbjct: 588 VPLSTLTNWNLEFDKWAPSVSKVVYKGPPNARKQQQQQIRWGNFQVLLTTYEYI------ 641
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L + S +R+I++GTP+QNN
Sbjct: 642 ------IKDRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNN 695
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 696 LPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQL--LVIRRLHKVLR 753
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ R ++ Q +LY+ + ++++V+S G
Sbjct: 754 PFLLRRLKKDV--EKD------LPDKQERVIKCRFSALQAKLYKQLVTHNKMVVSDGKGG 805
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP A
Sbjct: 806 KTGMRGLSNMLMQLRKLCNHPF---------VFEPVEDQMNPGRAT-------------- 842
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 843 --------NDLIWRTAGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGLKY 894
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ F G FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 895 LRLDGSTKSDDRSDLLKLFNAPGSDYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQD 954
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 955 LQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFK 992
>gi|307174075|gb|EFN64762.1| DNA repair and recombination protein RAD54-like [Camponotus
floridanus]
Length = 682
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 169/568 (29%), Positives = 286/568 (50%), Gaps = 82/568 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGK------GGILGDDMGLGKTMQICGFLAGLFHS---- 349
+ N+L PHQREG+++++ GK G I+ D+MGLGKT+Q L L
Sbjct: 85 LCNVLRPHQREGVKFMYEC-VTGKRIENAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 143
Query: 350 -RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYE-----------LQY 397
LI +A++VAP +L+ +W E I ++ V T + L++
Sbjct: 144 KPLIDKAIIVAPSSLVKNWYNE---------INKWLNNIVNTLAIDGGKKAEIDTKLLRF 194
Query: 398 VLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKS 457
+ G +T I+ + L DE G ++ DEGH +KN Q +S
Sbjct: 195 MKTYGGRCVTPILIISYETFRLHAHVLHQDEVG-------LVLCDEGHRLKNSENQTYQS 247
Query: 458 LLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALD 517
L+ + + R+++SGTPIQN+L E ++L +F LLG + F+ KYE PILRG D A D
Sbjct: 248 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKYETPILRGQDAAATD 307
Query: 518 REKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK----KNEMIVWLRLTSC 573
++++ +L + +RR +SA LSK K+E +V +++
Sbjct: 308 DQRKLAQERLSDLVSVVNKCLIRR------------TSALLSKYLPLKHEFVVCIKMGEL 355
Query: 574 QRQLYEAFLNSEIVLSAFDG----------SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
Q +LY+ F+ SE + + + S LAA+T+LKK+C+HP L+ + E +G
Sbjct: 356 QTRLYKNFIQSESIKRSMEEDDNPKKGGHLSALAAITLLKKLCNHPDLIYDKIMEKS-EG 414
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIF 683
+ A+ L H + + + + C ++ I + + +++
Sbjct: 415 FEKA--------AQLLPSHYSTKQLLPELSGKLMVLDCLLASIKTTTND------KIVLV 460
Query: 684 SQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLG 742
S + L+L ++ + Y ++R+DG+ R K+V +F + IF+L+S+ GG G
Sbjct: 461 SNYTQTLDLFEKLCNKRSYNYVRLDGSMTIKKRSKVVENFNSDTSSDFIFMLSSKAGGCG 520
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
L L A+R+++ DP WNP+ D+Q++ R +R GQKK VYR ++ GT+EEKI+++Q K
Sbjct: 521 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKTCFVYRFLSTGTIEEKIFQRQAHKK 580
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELLSL 829
L T + ++ + R+F+ DLR+L L
Sbjct: 581 ALSSTVVDQEDDVARHFTINDLRDLFKL 608
>gi|270009357|gb|EFA05805.1| hypothetical protein TcasGA2_TC030720 [Tribolium castaneum]
Length = 729
Score = 249 bits (637), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 178/560 (31%), Positives = 288/560 (51%), Gaps = 71/560 (12%)
Query: 300 IGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLAGLFHS----- 349
+ N+L PHQREG+++++ G I+ D+MGLGKT+Q L L
Sbjct: 112 LSNILRPHQREGVKFMYDCVTGVQIPNSFGCIMADEMGLGKTLQCITLLWTLVRQGPECK 171
Query: 350 RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG-----V 404
I + ++V P +L+ +W E+ L ++ + +L +Q G V
Sbjct: 172 PTIDKGIIVCPSSLVRNWSNEIDK-WLKGRLSCLIMDGGPDARKKLTQFMQGFGRTAIPV 230
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
L+ +Y+ R +++ L S E G ++ DEGH +KN Q K+L+ + +
Sbjct: 231 LIISYETFRMHAEILHKS-----EIG-------LVLCDEGHRLKNCENQTYKALMGLKAR 278
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
R+++SGTPIQN+L E ++L +F LLG + FK+K+E PILRG D A D E++
Sbjct: 279 RRVLLSGTPIQNDLLEYFSLVHFVNEGLLGSAQEFKKKFENPILRGQDSTATDSERQKAV 338
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS 584
KEL + + +RR N + + L K EMIV +LT Q+Q+Y ++NS
Sbjct: 339 ERLKELSDLVNRCLIRRTSNLL--------TKYLPVKFEMIVICQLTPLQKQIYLNYINS 390
Query: 585 EIVLSAF--------DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
E + S LA++T LKK+C+HP L+ MD +L E
Sbjct: 391 EGLRKGVLNDVEVKASLSALASITTLKKLCNHPDLI-----------MDKIL--EGGEGF 437
Query: 637 EKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-----VLIFSQTRKMLN 691
EK + H+ D ++ ++S L LLD + N V++ S + L+
Sbjct: 438 EK-SRHLLPPNYNDK------DVMPQLSGKLMLLDCFLANLKNNYNDKVVLVSNYTQTLD 490
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADR 750
L ++ +GY+++R+DGT R K+V +F + + IF+L+S+ GG GL L A+R
Sbjct: 491 LFEKLCRKRGYRYVRLDGTMSIKKRAKVVANFNDPESGEFIFMLSSKAGGCGLNLIGANR 550
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE 810
+I+ DP WNP+ D+Q++ R +R GQ+K +YR + GT+EEKI+++Q K L T +
Sbjct: 551 LIMFDPDWNPANDDQAMARVWRDGQQKPCYIYRFLAAGTIEEKIFQRQAHKKALSSTVVD 610
Query: 811 HKEQI-RYFSQQDLRELLSL 829
+ E+ R+FS +LR+L L
Sbjct: 611 NNEETARHFSVAELRDLFKL 630
>gi|383861314|ref|XP_003706131.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A containing DEAD/H box
1-like [Megachile rotundata]
Length = 831
Score = 249 bits (637), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 269/524 (51%), Gaps = 56/524 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA----LVVA 359
L +Q GL WL +H Q GIL D+MGLGKT+Q+ FL L + L L+V
Sbjct: 263 LASYQMVGLNWLAVMHAQHVNGILADEMGLGKTVQVIAFLTYLKEAGLKDEKDGPHLIVV 322
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV---LQDKGVLLTTYDIVRNNS 416
P + + +W EL K+ +Y GT + ++ L + L D VLLTTY ++ +
Sbjct: 323 PSSTMENWNNELERWSPGLKVVKYCGTQEERKEMRLGWRNGDLDDVDVLLTTYSLISSTP 382
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQN 476
+ R + I+ Y++ DE H++KN ST R ++L+ I + HRI+++GTP+QN
Sbjct: 383 EERRLFRVM--------PIY-YVVFDEAHMLKNMSTIRYENLVRINAKHRILLTGTPLQN 433
Query: 477 NLKELWALFNFCCPELLGDNK-----WFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
NL EL +L F P L + F + ++P+ + + ++E+ K +
Sbjct: 434 NLLELMSLLIFVMPSLFAGKQADLKSLFSKNPKIPVKKDGEPPLFEQEQ------VKNAK 487
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYE---AFLNSEIVL 588
+ ++P+ LRRLK+EV + L K E ++ LT Q++LY A ++E
Sbjct: 488 QIMRPFVLRRLKSEVLQD--------LPTKTENVIKCPLTEKQQKLYTDLIAKFSAEADQ 539
Query: 589 SAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
S + + L+K+ +HPLL+ + L + S L E + D+
Sbjct: 540 STVVNG-IGMMMQLRKLANHPLLVRDYYNDSKLRIISSRLAKEHTYKQKNPDYVFEDLQW 598
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIP-----------------EGHNVLIFSQTRKMLN 691
D+Q + K L L +LIP EGH VLIFSQ +L+
Sbjct: 599 LSDYQISQLTRTYKSLAGLGLPQELIPGAGKLKILDEMLPKLKAEGHRVLIFSQFTMVLD 658
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+++E + +G K+LR+DG+T SDR ++N + E + +FLL+++ GGLG+ LT AD V
Sbjct: 659 ILEEYLTIRGQKYLRMDGSTPVSDRQDLINQYTEDESINVFLLSTKAGGLGINLTVADTV 718
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
I+ D +NP D Q+ DR +R+GQK+ V + RL++ GT+EE +Y
Sbjct: 719 IIHDIDFNPYNDKQAEDRCHRVGQKRPVTITRLLSEGTIEEGMY 762
>gi|226290625|gb|EEH46109.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides brasiliensis Pb18]
Length = 1332
Score = 249 bits (637), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 266/518 (51%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 433 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQNGPFLVI 492
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + + VLLTTY+ +
Sbjct: 493 VPLSTLTNWNLEFEKWAPSVSRIVYKGPPTTRKQQQQAIRWGNFQVLLTTYEYI------ 546
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L + + +R+I++GTP+QNN
Sbjct: 547 ------IKDRPVLSKVKWIHMIVDEGHRMKNAGSKLSSTLTQYYTTRYRLILTGTPLQNN 600
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELW L NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 601 LPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQL--LVIRRLHKVLR 658
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ + ++++V+S G
Sbjct: 659 PFLLRRLKKDV--EKD------LPEKQERVIKCRFSALQAKLYKQLVTHNKLVVSDGKGG 710
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP A
Sbjct: 711 KTGMRGLSNMLMQLRKLCNHPF---------VFESVEDEMNPGRAT-------------- 747
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 748 --------NDLIWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKY 799
Query: 705 LRIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ +F G FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 800 LRLDGSTKSDDRSDLLKEFNAPGSEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD 859
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL+T +VEE+I + FK
Sbjct: 860 LQAQDRAHRIGQKNEVRILRLITSNSVEERILERAQFK 897
>gi|403213376|emb|CCK67878.1| hypothetical protein KNAG_0A01890 [Kazachstania naganishii CBS 8797]
Length = 1840
Score = 249 bits (637), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 282/585 (48%), Gaps = 95/585 (16%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-------- 345
+ LP I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A
Sbjct: 1266 FKLPVAIKATLRKYQQDGINWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRQEE 1325
Query: 346 -----LFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
L SR + +L++ P +L HW +
Sbjct: 1326 YKKQILDESRPLP-SLIICPPSLTGHWENXXXXXXV------------------------ 1360
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+T+YD+ RN+ + L D+ ++Y +LDEGH+IKN ++ AK++ +
Sbjct: 1361 -----VTSYDVARNDVEIL------------DNCDYNYCVLDEGHIIKNAQSKLAKAVKK 1403
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
+ HR+I++GTPIQNN+ ELW+LF+F P LG K F+E++ PI + +E+
Sbjct: 1404 FRANHRLILTGTPIQNNVVELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQ 1463
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G + L +++ P+ LRRLK +V + L K + L+ QRQLYE
Sbjct: 1464 EAGVLALEALHKQVLPFMLRRLKEDVLSD--------LPPKIIQDYYCELSDLQRQLYED 1515
Query: 581 FLNSE--IVLSAFDGSPLA--------ALTILKKICDHP-LLLT-----KRAAEDVLDGM 624
F + +V + + +A AL ++K+C+HP L+LT R L
Sbjct: 1516 FAKKQKNVVEKDVEDTTVADNKQHIFQALQYMRKLCNHPALVLTPNHPQTRQVHYYLK-- 1573
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
+ L+ D A KL+ + E +E +D S + L + + H LIF
Sbjct: 1574 QTGLDLHDIINAPKLSALRTLLLECGIGEEDNDKKSDQY-----LTGQNVISQHRALIFC 1628
Query: 685 QTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q + ML++++ + K ++R+DG+ DR ++V F E LLT++VGGL
Sbjct: 1629 QLKDMLDMVENDLFKKYMPSVTYMRLDGSVDPRDRQQVVKKFNEDPSIDCLLLTTKVGGL 1688
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD VI V+ WNP D Q++DRA+R+GQKK V VYR++T GT+EEKI Q FK
Sbjct: 1689 GLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRIITKGTLEEKIMGLQKFK 1748
Query: 802 GGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 846
+ T +Q + D +LL L FD S Q EE
Sbjct: 1749 MNIASTVV--NQQNSGLASMDTHQLLDL----FDTSNVPSQDEEE 1787
>gi|393247485|gb|EJD54992.1| hypothetical protein AURDEDRAFT_147677 [Auricularia delicata
TFB-10046 SS5]
Length = 1411
Score = 249 bits (637), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 172/538 (31%), Positives = 263/538 (48%), Gaps = 72/538 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH-SRLIKRALVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L R LV+
Sbjct: 555 VGGKLKDYQLKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLVTFLIEVKRQPGPYLVI 614
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S K Y G+ R + + VLLTTY+ +
Sbjct: 615 VPLSTLTNWTLEFQKWAPSVKTISYKGSPAVRRTLQNDIRMGQFQVLLTTYEYI------ 668
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ +++L + S +R+I++GTP+QNN
Sbjct: 669 ------IKDRPVLSKMRWVHMIIDEGHRMKNTQSKLSQTLGQYYHSRYRLILTGTPLQNN 722
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELW+L NF P++ + F E + P G DK L+ E+ + + + L + ++
Sbjct: 723 LPELWSLLNFVLPKVFNSAQSFDEWFNTPFANTGGQDKIELNEEEAL--LIIRRLHKVLR 780
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA---FD 592
P+ LRRLK +V E L K E ++ +L++ Q QLY+ ++ +
Sbjct: 781 PFLLRRLKKDVESE--------LPDKVEKVIKCKLSALQTQLYKQMKKHGMLFAEGKDAK 832
Query: 593 GSPLA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
G L AL L+KIC HP L + ++ +NP + +K+
Sbjct: 833 GKQLGLKGLNNALMQLRKICQHPYLFEE---------VEQKINP-SGLIDDKIIRS---- 878
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLR 706
S K+ + +L KL GH VLIF Q K+++++ + + GYK LR
Sbjct: 879 -------------SGKVELLSRILPKLFATGHRVLIFFQMTKVMDIMSDFMNFMGYKHLR 925
Query: 707 IDGTTKASDRVKIVNDFQEGDVA-PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
+DG+TK +R V F D +FLL+++ GGLGL L AD VI+ D WNP D Q
Sbjct: 926 LDGSTKTDERASYVQLFNAKDSEYQVFLLSTRAGGLGLNLQTADTVIIFDSDWNPHADLQ 985
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK---------GGLFKTATEHKEQ 814
+ DRA+RIGQ K V + R +T +VEE ++ + FK G F + KEQ
Sbjct: 986 AQDRAHRIGQTKAVRILRFITEKSVEEAMFARARFKLAIDGKVIQAGKFDNKSTDKEQ 1043
>gi|384499300|gb|EIE89791.1| hypothetical protein RO3G_14502 [Rhizopus delemar RA 99-880]
Length = 1170
Score = 249 bits (637), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 165/526 (31%), Positives = 274/526 (52%), Gaps = 74/526 (14%)
Query: 295 MLPGK-IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLI 352
M PG +G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L R
Sbjct: 365 MQPGLLVGGRLKDYQLKGLQWMVSLYNNHLNGILADEMGLGKTIQTISLITYLIEKKRQN 424
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIV 412
L++ P + L++W E S + Y G R+ + + D VLLTT++ +
Sbjct: 425 GPYLIIVPLSTLTNWTLEFEKWAPSVRKIAYKGPPSVRRELQNEIRYGDFQVLLTTFEYI 484
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISG 471
I D W +MI+DEGH +KN +++ L + + +R+I++G
Sbjct: 485 ------------IKDRPILSKIKWLHMIVDEGHRMKNTNSKLTVVLRQYYHTKYRLILTG 532
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGN--DKHALDREKRIGSAVAKE 529
TP+QNNL ELWAL NF P++ K F+E + P DK AL+ E+++ + K
Sbjct: 533 TPLQNNLPELWALLNFILPKIFKSVKSFEEWFNTPFSNQGVADKVALNEEEQL--LIIKR 590
Query: 530 LRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLS 589
L + ++P+ LRRLK +V A L K E ++ +L+ Q LY + + +
Sbjct: 591 LHKVLRPFLLRRLKRDV--------EAELPDKVERVIRCKLSPLQTHLYTQMKRNGTLYT 642
Query: 590 AFDGSPLAA--------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAM 641
+ D S + + L+KIC+HP V + ++S++NP +
Sbjct: 643 S-DASKGKSGIKGLNNTIMQLRKICNHPF---------VFEEVESLVNPSGMS------- 685
Query: 642 HIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESI 697
+++ ++S LLD+++P+ GH VLIF Q ++++++++ +
Sbjct: 686 ---------------NDLLYRVSGKFELLDRMLPKLQQTGHRVLIFFQMTQVMSIMEDFL 730
Query: 698 GSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVD 755
KG+ +LR+DG+TK+ DR +++ F + +P +FLL+++ GGLGL L AD VI+ D
Sbjct: 731 NYKGFSYLRLDGSTKSDDRSELLRLFNDP-ASPYFVFLLSTRAGGLGLNLQTADTVIIFD 789
Query: 756 PAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
WNP D Q+ DRA+RIGQ K+V ++RL++ +VEE I + +K
Sbjct: 790 SDWNPHQDLQAQDRAHRIGQTKEVRIFRLISTNSVEESILARANYK 835
>gi|189091948|ref|XP_001929807.1| hypothetical protein [Podospora anserina S mat+]
gi|27803083|emb|CAD60786.1| unnamed protein product [Podospora anserina]
gi|188219327|emb|CAP49307.1| unnamed protein product [Podospora anserina S mat+]
Length = 800
Score = 249 bits (637), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 175/570 (30%), Positives = 282/570 (49%), Gaps = 72/570 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
PR ++ K+ +L PHQ EG+++++ + G I+ D+MGLGKT+Q L
Sbjct: 197 PRVPVVIDPKLAKILRPHQIEGVKFMYKCVTGMVDEKAHGCIMADEMGLGKTLQCITLLW 256
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++A+V P +L+ +W EL L F K + EL
Sbjct: 257 TLLKQSPDAGKTTIQKAIVACPASLVRNWANELVK-WLGPDATTPFAIDGKASKEELTRQ 315
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + +++ +Y+ +R N + LR + E G ++ DEGH +K
Sbjct: 316 LRQWAIATGRAVTRPIIIVSYETLRLNCEELRNT-----EIG-------LILCDEGHRLK 363
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + +L + R+I+SGTPIQN+L E ++L +F P+LLG + F++++E+PIL
Sbjct: 364 NNDNKLFTALNGLNVKRRVILSGTPIQNDLSEYFSLISFANPDLLGTHLEFRKRFEIPIL 423
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D A + E++ G EL + + +RR + + S L K E +V+
Sbjct: 424 RGRDSMASEAERKRGDECLAELATIVNKFVIRRTNDLL--------SKYLPIKYEHVVFC 475
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY FL S + + G PL A+ ILK +C+HP LL
Sbjct: 476 NLAPFQLDLYNYFLTSPDIQALLRGKGSQPLKAIGILKNLCNHPDLLKL----------- 524
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
P+D +E+ H D D + + +I S + +LD+++ +
Sbjct: 525 ----PDDLPGSEQ---HYPDDYVPRDSRGRDRDIKPWYSGKMQVLDRMLARIRADTNDKI 577
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQE--GDVAPIFLLTSQV 738
++ S + L+L ++ S+ Y LR+DG + R K+V+ F + GD +FLL+S+
Sbjct: 578 VLISNYTQTLDLFEKLCRSRAYPCLRLDGKMLVNKRQKLVDKFNDPNGDEF-VFLLSSKA 636
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 637 GGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQ 696
Query: 799 IFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 697 SHKQSLSSCVVDSAEDVERHFSLDSLRELF 726
>gi|348520915|ref|XP_003447972.1| PREDICTED: transcription activator BRG1-like [Oreochromis niloticus]
Length = 1657
Score = 249 bits (637), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 264/545 (48%), Gaps = 70/545 (12%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALVV 358
I L +Q +GL WL SL+ GIL D+MGLGKT+Q + L H RL L++
Sbjct: 790 INGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLII 849
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+W+ E S Y G+ R + Q VLLTTY+ +
Sbjct: 850 VPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYI------ 903
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D+ W YMI+DEGH +KN + + L + R++++GTP+QN
Sbjct: 904 ------IKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNK 957
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P +K L+ E+ I + + L + ++P+
Sbjct: 958 LPELWALLNFLLPTIFKCCSTFEQWFNAPFAMTGEKVDLNEEETI--LIIRRLHKVLRPF 1015
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV A L +K E ++ ++S QR LY ++L+ DGS
Sbjct: 1016 LLRRLKKEV--------EAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLT--DGSEKD 1065
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ + L+KIC+HP M + + +E L
Sbjct: 1066 KKGKGGTKTLMNTIMQLRKICNHPY----------------MFQQIEESFSEHLGFSGGI 1109
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
V D ++ S K + +L KL H VL+F Q ++ ++++ + +K+L
Sbjct: 1110 VQGPDLYR-----ASGKFEVLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYL 1164
Query: 706 RIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
R+DGTTKA DR ++ F + + IFLL+++ GGLGL L AD V++ D WNP D
Sbjct: 1165 RLDGTTKAEDRGMLLKTFNDPESEYFIFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDL 1224
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQI 815
Q+ DRA+RIGQ+ +V V RL T +VEEKI Y+ +++ + G+F + E+
Sbjct: 1225 QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHER- 1283
Query: 816 RYFSQ 820
R F Q
Sbjct: 1284 RAFLQ 1288
>gi|356543311|ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated factor 172-like [Glycine
max]
Length = 2047
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 183/556 (32%), Positives = 273/556 (49%), Gaps = 88/556 (15%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF--HSRL 351
Y L ++ L +Q+EG+ WL L GIL DDMGLGKT+Q +A H
Sbjct: 1441 YKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTS 1500
Query: 352 IKR-----ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV-------- 398
I +L++ P TL+ HW E I +Y V + LQYV
Sbjct: 1501 IGNEDLLPSLIICPSTLVGHWAFE---------IEKYIDVSVIS---SLQYVGSAQERML 1548
Query: 399 LQDK----GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQR 454
L+D V++T+YD+VR + L +W++ ILDEGH+IKN ++
Sbjct: 1549 LRDHFCKHNVIITSYDVVRKDIDFL------------GQLLWNHCILDEGHIIKNAKSKV 1596
Query: 455 AKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKH 514
++ ++ + HR+I+SGTPIQNN+ +LW+LF+F P LG + F+ Y P+L D
Sbjct: 1597 TLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQATYGKPLLAARDPK 1656
Query: 515 ALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLT 571
R+ G+ + L +++ P+ LRR K+EV LS E I+ + L+
Sbjct: 1657 CSARDAEAGALAMEALHKQVMPFLLRRTKDEV-----------LSDLPEKIIQDRYCDLS 1705
Query: 572 SCQRQLYEAFLN-------SEIVLS----AFDGSP---------LAALTILKKICDHPLL 611
Q +LYE F S +V + A +GS AL L K+C HPLL
Sbjct: 1706 PVQFKLYEQFSGSRAKQEMSSVVTTNESAAAEGSSNSTKASSHVFQALQYLLKLCSHPLL 1765
Query: 612 LTKRAAEDVLDGMDSMLNPEDAALAEKL--AMHIADVAEKDDFQEQHDNISCKISFILSL 669
+ D L + S L P + + +L H + + E+ C I S
Sbjct: 1766 VIGEKIPDSLSTILSELFPAGSDVISELHKLYHSPKLVALHEILEE-----CGIGVDNSG 1820
Query: 670 LDKLIPEG-HNVLIFSQTRKMLNLIQESI---GSKGYKFLRIDGTTKASDRVKIVNDFQE 725
+ + G H VLIF+Q + L++I+ + K +LR+DG+ + R +IV F
Sbjct: 1821 SEGAVNVGQHRVLIFAQHKAFLDIIERDLFHTHMKSVTYLRLDGSVEPEKRFEIVKAFNS 1880
Query: 726 GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLM 785
+ LLT+ VGGLGL LT AD ++ V+ WNP D+Q++DRA+R+GQKK V V+RL+
Sbjct: 1881 DPTIDVLLLTTHVGGLGLNLTSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLI 1940
Query: 786 TCGTVEEKIYRKQIFK 801
GT+EEK+ Q FK
Sbjct: 1941 MRGTLEEKVMSLQRFK 1956
>gi|452824666|gb|EME31667.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria sulphuraria]
Length = 1777
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 290/556 (52%), Gaps = 78/556 (14%)
Query: 291 RSTYMLPGKI-GNM-LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKT-MQICGFLAGLF 347
R Y LP ++ GN+ L +QR+GL WL L G G+L DDMGLGKT M +C +
Sbjct: 1166 REPYNLPVQLEGNIQLREYQRQGLEWLAFLKRYGLHGLLCDDMGLGKTLMTLCIIVGDTV 1225
Query: 348 HSR---LIKRALVVAPKTLLSHWIKELT-AVGLSAKIREYFGTCVKTRQYELQYVLQDKG 403
+ K +LV+AP ++ +HW +E G S + K R+ L +
Sbjct: 1226 EWKNYGFQKHSLVIAPSSVTAHWFQEAKRFFGSSLSNVILYADSAKKRKKRLA-SFESSP 1284
Query: 404 VLLTTYDI-VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP 462
+++T+Y+I +R++ +S + + W+Y++LDEGH+I+N ++ A ++ +
Sbjct: 1285 LIITSYEIKIRSDIESFQSYA------------WNYLVLDEGHVIRNHHSKTALAIKSLL 1332
Query: 463 SAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRI 522
+ HR+I+SGTP+QN++K+LW+LF+F P LGD F+E++ PILRG + +++
Sbjct: 1333 AEHRLILSGTPVQNSVKDLWSLFDFLTPGFLGDEASFQERFVRPILRGKLLSSEQKDREQ 1392
Query: 523 GSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA-- 580
+ + L ++ P+ LRR+K++V E LS + S Q +LY A
Sbjct: 1393 ADVLLETLHRQVLPFILRRMKSDVLAELPPKIIQNLS--------FEMNSLQAKLYNAVS 1444
Query: 581 -FLNS----EIVLSAFDGSP----LAALTILKKICDHPLLL-----------TKRAAEDV 620
FL + ++V D SP +AL L++IC HP+LL + + A DV
Sbjct: 1445 GFLATTAKEQLV---HDKSPSLHIFSALRCLQQICTHPVLLLDSGKDWIENVSGKLAIDV 1501
Query: 621 LDGMDSMLNPEDAALAEKLA-----MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIP 675
+ + L + A +H +VA+K+ +E + D +
Sbjct: 1502 NSCYHWKSSSKFQCLYDLFADLGLILHEEEVAQKELKEEPEET------------DWDMN 1549
Query: 676 E---GHNVLIFSQTRKMLNLIQESIGSKG----YKFLRIDGTTKASDRVKIVNDFQEGDV 728
E GH VL+F+Q R+ L+++++ + +G +LR++GT R IV F
Sbjct: 1550 EQDTGHRVLLFAQNRRTLDIVEKFLFMEGPFRHLSYLRLEGTVSPMHRQAIVTRFNSDPS 1609
Query: 729 APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCG 788
LLT+Q+GGLGL LT AD V+ ++ WNP D Q++DRA+RIGQ + V V++L+T G
Sbjct: 1610 ISCMLLTTQIGGLGLNLTGADTVVFIEQDWNPVKDMQAMDRAHRIGQTRTVNVFKLVTKG 1669
Query: 789 TVEEKIYRKQIFKGGL 804
T+EEKI + Q K +
Sbjct: 1670 TLEEKIMKLQEMKTAV 1685
>gi|189238349|ref|XP_967988.2| PREDICTED: similar to steroid receptor-interacting snf2 domain
protein [Tribolium castaneum]
Length = 713
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 178/560 (31%), Positives = 288/560 (51%), Gaps = 71/560 (12%)
Query: 300 IGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLAGLFHS----- 349
+ N+L PHQREG+++++ G I+ D+MGLGKT+Q L L
Sbjct: 96 LSNILRPHQREGVKFMYDCVTGVQIPNSFGCIMADEMGLGKTLQCITLLWTLVRQGPECK 155
Query: 350 RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG-----V 404
I + ++V P +L+ +W E+ L ++ + +L +Q G V
Sbjct: 156 PTIDKGIIVCPSSLVRNWSNEIDK-WLKGRLSCLIMDGGPDARKKLTQFMQGFGRTAIPV 214
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
L+ +Y+ R +++ L S E G ++ DEGH +KN Q K+L+ + +
Sbjct: 215 LIISYETFRMHAEILHKS-----EIG-------LVLCDEGHRLKNCENQTYKALMGLKAR 262
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
R+++SGTPIQN+L E ++L +F LLG + FK+K+E PILRG D A D E++
Sbjct: 263 RRVLLSGTPIQNDLLEYFSLVHFVNEGLLGSAQEFKKKFENPILRGQDSTATDSERQKAV 322
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS 584
KEL + + +RR N + + L K EMIV +LT Q+Q+Y ++NS
Sbjct: 323 ERLKELSDLVNRCLIRRTSNLL--------TKYLPVKFEMIVICQLTPLQKQIYLNYINS 374
Query: 585 EIVLSAF--------DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
E + S LA++T LKK+C+HP L+ MD +L E
Sbjct: 375 EGLRKGVLNDVEVKASLSALASITTLKKLCNHPDLI-----------MDKIL--EGGEGF 421
Query: 637 EKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-----VLIFSQTRKMLN 691
EK + H+ D ++ ++S L LLD + N V++ S + L+
Sbjct: 422 EK-SRHLLPPNYNDK------DVMPQLSGKLMLLDCFLANLKNNYNDKVVLVSNYTQTLD 474
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADR 750
L ++ +GY+++R+DGT R K+V +F + + IF+L+S+ GG GL L A+R
Sbjct: 475 LFEKLCRKRGYRYVRLDGTMSIKKRAKVVANFNDPESGEFIFMLSSKAGGCGLNLIGANR 534
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE 810
+I+ DP WNP+ D+Q++ R +R GQ+K +YR + GT+EEKI+++Q K L T +
Sbjct: 535 LIMFDPDWNPANDDQAMARVWRDGQQKPCYIYRFLAAGTIEEKIFQRQAHKKALSSTVVD 594
Query: 811 HKEQI-RYFSQQDLRELLSL 829
+ E+ R+FS +LR+L L
Sbjct: 595 NNEETARHFSVAELRDLFKL 614
>gi|421734679|ref|ZP_16173742.1| helicase [Bifidobacterium bifidum LMG 13195]
gi|407077368|gb|EKE50211.1| helicase [Bifidobacterium bifidum LMG 13195]
Length = 1339
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 176/568 (30%), Positives = 284/568 (50%), Gaps = 79/568 (13%)
Query: 270 LDDYSDDSVLEDEGSITLSGPR----STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGG 325
LD DD + + L G R STY +P + ++L P+Q EG RWL ++ +G GG
Sbjct: 777 LDHQVDDDAKDASFTAYLDGLRVIDPSTYRVPAALVSVLRPYQAEGFRWLNAVCDKGFGG 836
Query: 326 ILGDDMGLGKTMQICGFL-AGLFHSRLIKRA-LVVAPKTLLSHWIKELTAVGLSAKIREY 383
IL D+MGLGK++Q+ L A SR R L+V P +L+ +W+ E+ ++
Sbjct: 837 ILADEMGLGKSVQLLSLLLARHKESRAEHRPNLIVCPASLVYNWVAEVAKHTPELRVEAI 896
Query: 384 FGTCVKTRQY--ELQYVLQDKGV----------------------LLTTYDIVRNNSKSL 419
GT + R ++ QD GV L+T+YD++R +
Sbjct: 897 AGTKPERRAMLDGVRAAQQDTGVSPTRESARPASAAAASDDVPDVLVTSYDLLRRDIDDY 956
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
G F M LDE IKN +T+ +K++ + + HR ++GTPI+N L
Sbjct: 957 AGLEFYC------------MTLDEAQYIKNAATKVSKAVRSVTAVHRFALTGTPIENRLS 1004
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
ELW++F+F P +LG F+E++E+P+L G++ K+L+ + P+ L
Sbjct: 1005 ELWSIFDFLMPGMLGSYAHFRERFEMPVLSGDET------------AQKKLQSFVGPFIL 1052
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF---LNSEIVL---SAFDG 593
RRLK++V + L K E ++ ++L QR+LY A L S I+ + F+
Sbjct: 1053 RRLKSQVLKD--------LPDKIENVITVQLQGEQRKLYAALEQQLRSVILRQRPADFNT 1104
Query: 594 SP---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
LA LT L+++C P L+ + A DG S L+ + A+ + ++
Sbjct: 1105 GKIQILAQLTRLRQVCCDPRLIYENA-----DGHASALSAGVQSAAKDPQQSVKQPVKQS 1159
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
+ + S K+ I+ L+D G +LIFSQ L+LI + + + G ++ I G
Sbjct: 1160 --KARKTVSSAKLDAIIELVDSCRDAGRKMLIFSQFTSYLDLIAQRLRADGVEYDMITGA 1217
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T R+++V+ F D P+FL++ + G GL LT A V+ DP WN + +Q+ DRA
Sbjct: 1218 TPKKRRLELVDRFN-ADATPVFLISLKAGNTGLNLTGACVVVHADPWWNAAAQDQATDRA 1276
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
+RIGQ +DV VY+++ T+EE+I Q
Sbjct: 1277 HRIGQTQDVNVYQIVAKDTIEERILNLQ 1304
>gi|123445199|ref|XP_001311362.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
gi|121893168|gb|EAX98432.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
Length = 1639
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 181/572 (31%), Positives = 288/572 (50%), Gaps = 62/572 (10%)
Query: 298 GKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRAL 356
K G +L+ +Q +GL +L + I+ D+MGLGKT Q+ FL L S ++ L
Sbjct: 242 SKSGKVLYKYQLDGLNFLIHSWFKNNNAIIADEMGLGKTAQVSTFLDFLNKSQKIFGPFL 301
Query: 357 VVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNS 416
+V P + L HW +ELT K+ GT ++ RQ + L +G + + I+
Sbjct: 302 IVVPLSTLDHWYRELTD-WTDLKVLILRGTKIE-RQLIFENELYYEGTEIPRFQIMLTTG 359
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQN 476
+ S + ++ W ++ DE H +K+ +++ ++ E S ++++++GTP+QN
Sbjct: 360 EIALKSKTVFEQFE-----WQVLVFDEAHRLKSHTSKLLLAVKEFKSQYKVLMTGTPLQN 414
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQP 536
N+ EL+ L NF P+L D F E + L +K+I EL+E I+P
Sbjct: 415 NIGELFTLLNFIDPQLFDDRTKFSESFA----------DLSEKKQIV-----ELKELIEP 459
Query: 537 YFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA-FLNSEIVLSAFDGSP 595
+ LRRLK +V L E+I+ +T QR+ Y A F ++ L+ +
Sbjct: 460 FMLRRLKGDV--------EKKLIPLEEIIIECGMTKSQREYYRAVFTKNQEFLTRCEKRR 511
Query: 596 LAALTI----LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
LA L L+K+C+HP L+T EDA L EK+ + ++
Sbjct: 512 LANLNNISMELRKVCNHPYLIT---------------GAEDAILIEKM-QQLGLKERTNE 555
Query: 652 FQ-EQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
F+ E S K+ + LL L EGH VLIFSQ KML+L+Q+ + + YK+ RIDGT
Sbjct: 556 FELETLIRTSGKLILVDKLLANLKKEGHRVLIFSQMTKMLDLLQDMLTYRNYKYRRIDGT 615
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
+ DR ++DFQE + +FLL ++ GG+G+ LT ADR I+ D WNP D Q+ R
Sbjct: 616 VRGKDRQASIDDFQEQEDIFVFLLCTRAGGVGINLTSADRCIIYDSDWNPQNDIQATARC 675
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLP 830
+RIGQ K+V +YRL+T + E ++ K GL K E+ + +D +EL +
Sbjct: 676 HRIGQTKEVKMYRLITKNSYERSMFDTASKKLGLDKAILENDTE-----HKDAKELEKMI 730
Query: 831 KQGFDVSLTQQQLHEEHGDQHNMDESLEAHIQ 862
K G + +E+ ++ N DE + A I+
Sbjct: 731 KIGAYHAFED----DENANEINEDEDINAIIE 758
>gi|238503544|ref|XP_002383005.1| RSC complex subunit (Sth1), putative [Aspergillus flavus NRRL3357]
gi|220690476|gb|EED46825.1| RSC complex subunit (Sth1), putative [Aspergillus flavus NRRL3357]
Length = 1095
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 265/518 (51%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + + + LV+
Sbjct: 274 VGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEKKKNNGPFLVI 333
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + Q + VLLTTY+ +
Sbjct: 334 VPLSTLTNWNLEFEKWAPSVARVVYKGPPNARKQQQQQIRWGNFQVLLTTYEYI------ 387
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W++MI+DEGH +KN ++ + +L + S +R+I++GTP+QNN
Sbjct: 388 ------IKDRPILSKVKWNHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNN 441
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 442 LPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQL--LVIRRLHKVLR 499
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ R ++ Q +LY+ + ++++ +S G
Sbjct: 500 PFLLRRLKKDV--EKD------LPDKQERVIKCRFSALQAKLYKQLVTHNKMAVSDGKGG 551
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP
Sbjct: 552 KTGMRGLSNMLMQLRKLCNHPF---------VFEPVEDQMNPGRGT-------------- 588
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + S LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 589 --------NDLLWRTSGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKY 640
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ F E FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 641 LRLDGSTKSDDRSDLLKLFNAENSEYFCFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 700
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 701 LQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFK 738
>gi|303289625|ref|XP_003064100.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226454416|gb|EEH51722.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 743
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 160/519 (30%), Positives = 267/519 (51%), Gaps = 69/519 (13%)
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR 354
+LP NM +Q +G++WL +L+ G GIL D MGLGKT+Q GFL+ L ++
Sbjct: 157 LLPMMTVNMR-DYQLKGVKWLIALYQNGLNGILADQMGLGKTVQTIGFLSHLRSKGVLGP 215
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTC-----VKTRQYELQYVLQDK-GVLLTT 408
LV+ P + LS+W+ E S + Y G+ ++ R + ++D V++T+
Sbjct: 216 YLVIGPLSTLSNWVNEFHKFCPSFPVVLYHGSRTDRADIRARHLPITTPIKDTFPVIVTS 275
Query: 409 YDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRII 468
++IV + K L +F Y+++DEGH +KN + + L IP++++++
Sbjct: 276 FEIVMADRKFLSKYNF------------KYLVVDEGHRLKNFDCKLIRELKTIPTSNKLL 323
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
++GTP+QNNL ELW+L +F P++ F+ ++ + ND ++E + V +
Sbjct: 324 LTGTPLQNNLPELWSLLHFLLPDVFSSLSQFQSWFDFSAEQNND----EKETSKRAKVVE 379
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI-- 586
+L ++P+ LRRLK +V L +K E++++ + Q++ +A ++ I
Sbjct: 380 KLHGILKPFLLRRLKGDV--------EVNLPRKKEIVIYAHMVETQKKFNDALVDKTIGE 431
Query: 587 VLSAFDG--SPLAALTI------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
+L G +P+ + + L+K C+HP L++ LDG S++ P A L E+
Sbjct: 432 MLQKLSGGVAPVGSTALNNMLMQLRKNCNHPDLISGG-----LDG--SIMFPSAAELVEQ 484
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
K + ++ KL GH LIFSQ KML+LI+
Sbjct: 485 CG---------------------KFRLLDRIMKKLRQRGHKTLIFSQMTKMLDLIESYFE 523
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAW 758
+G + RIDG+ +R + ++ F IFLL+++ GGLG+ LT AD VI+ D W
Sbjct: 524 QQGSRVCRIDGSVAWQERKEQMDAFNTDPSVDIFLLSTRAGGLGINLTAADTVIIYDSDW 583
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
NP D Q++DR +RIGQ K V V RL T +VE K+ +
Sbjct: 584 NPHQDMQAMDRCHRIGQTKPVHVLRLATAHSVEGKMLSR 622
>gi|322701898|gb|EFY93646.1| recombinational repair protein [Metarhizium acridum CQMa 102]
Length = 819
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 170/560 (30%), Positives = 283/560 (50%), Gaps = 62/560 (11%)
Query: 295 MLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLAGLFHS 349
+L K+ +L PHQ EG+++++ + + G I+ D+MGLGKT+Q + L
Sbjct: 163 VLDPKLAKILRPHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLMWTLLKQ 222
Query: 350 R------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD-- 401
I++A+VV P +L+ +W ELT L A F K + EL L+
Sbjct: 223 SPEAGKPTIQKAIVVCPASLVKNWANELTK-WLGANAITPFAIDGKASKEELTRQLRQWA 281
Query: 402 --------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQ 453
+ V++ +Y+ +R N + L+ + + DEGH +KN +
Sbjct: 282 IASGRSVTRPVIIVSYETLRLNVEELKHTKI------------GLLFCDEGHRLKNSDSN 329
Query: 454 RAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDK 513
+L + + R+I++GTPIQN+L E ++L +F P+LLG F++++E+PILRG D
Sbjct: 330 TFNALNSLDVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGSRLEFRKRFEIPILRGRDA 389
Query: 514 HALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSC 573
A + +++ G EL + + +RR N++ S L K E +V+ ++
Sbjct: 390 DASESDRQRGDECTAELLGIVNKFLIRR-TNDIL-------SKYLPVKYEHVVFCSISPF 441
Query: 574 QRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNP 630
Q LY F+ S + + G PL A+ ILKK+C+HP LL D L G + P
Sbjct: 442 QASLYNYFITSPDIQALLRGKGSQPLKAINILKKLCNHPDLLN---LSDDLPGSECCFPP 498
Query: 631 EDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKM 689
E + A D ++ S K+ + +L ++ + ++ +++ S
Sbjct: 499 E----------YTPKEARGRD-RDVRPEYSGKMMVLDRMLARIRQDTNDKIVLISNYTST 547
Query: 690 LNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKA 748
L+L + S+ Y LR+DGT + R K+V+ F + + +FLL+S+ GG G+ L A
Sbjct: 548 LDLFERLCRSRQYGCLRLDGTMNVNKRQKLVDRFNDPNGEEFVFLLSSKAGGCGINLIGA 607
Query: 749 DRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA 808
+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K L
Sbjct: 608 NRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV 667
Query: 809 TEHKEQI-RYFSQQDLRELL 827
+ E + R+FS LREL
Sbjct: 668 VDSAEDVERHFSLDSLRELF 687
>gi|448525548|ref|XP_003869143.1| Rad54 protein [Candida orthopsilosis Co 90-125]
gi|380353496|emb|CCG23006.1| Rad54 protein [Candida orthopsilosis]
Length = 836
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 177/573 (30%), Positives = 291/573 (50%), Gaps = 77/573 (13%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P ++ K+ +L PHQ G+++L+ + + KG I+ D+MGLGKT+Q +
Sbjct: 231 PDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLMDPKAKGCIMADEMGLGKTLQCLTLMW 290
Query: 345 GLFHS-----RLIKRALVVAPKTLLSHWIKE---------LTAVGLSAKIREYFGTCVKT 390
L R I++ ++V P +L+ +W E LT + + K T
Sbjct: 291 TLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAIDGK---------ST 341
Query: 391 RQYELQYVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
+ +L LQ + VL+ +Y+ +R N L G+ E G M+
Sbjct: 342 KSNDLGAALQQWSTAQGRNIVRPVLIISYETLRRNVDKLAGT-----EVG-------LML 389
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
DEGH +KN + +L + R+I+SGTPIQN+L E ++L NF P LG F+
Sbjct: 390 ADEGHRLKNGESLTFTALNSLRCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFR 449
Query: 501 EKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK 560
+ +E ILRG D A D+E+ G A EL + + + +RR N++ S L
Sbjct: 450 KNFENAILRGRDADATDKEREKGDAKLLELSQLVSKFIIRR-TNDIL-------SKYLPV 501
Query: 561 KNEMIVWLRLTSCQRQLYEAFLNS-EI--VLSAFDGSPLAALTILKKICDHPLLLTKRAA 617
K E +++ L+ Q+ LY F+ S EI +L PL A+ +LKK+C+H
Sbjct: 502 KYEYVLFTGLSPMQKSLYNHFITSPEIKKLLKGIGSQPLKAIGMLKKLCNH---PDLLDL 558
Query: 618 EDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
D L+G ++++ PED + + + +E S K + L K+ E
Sbjct: 559 PDDLEGCENLI-PED---------YESSITATGRKREVQTWFSGKFLILERFLHKIHRET 608
Query: 678 HN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLT 735
+ +++ S + L+LI++ +K Y LR+DGT + R K+V+ F + + + IFLL+
Sbjct: 609 DDKIVLISNYTQTLDLIEKMCRNKKYGSLRLDGTMNINKRQKLVDRFNDPNGSEFIFLLS 668
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
S+ GG G+ L A+R+I++DP WNP++D Q++ R +R GQKKD +YR ++ GT+EEKI+
Sbjct: 669 SKAGGCGINLIGANRLILIDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIF 728
Query: 796 RKQIFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
++Q K L + KE + R FS +L++L
Sbjct: 729 QRQSMKMSLSSCVVDEKEDVERLFSADNLKQLF 761
>gi|300743764|ref|ZP_07072784.1| SNF2/helicase domain protein [Rothia dentocariosa M567]
gi|300380125|gb|EFJ76688.1| SNF2/helicase domain protein [Rothia dentocariosa M567]
Length = 1318
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 179/549 (32%), Positives = 281/549 (51%), Gaps = 75/549 (13%)
Query: 276 DSVLEDEGSITLS---GPRSTYMLPGKIG--NMLFPHQREGLRWLWSLHCQGKGGILGDD 330
+ VLE+E S +LS G S LP G +L P+Q EG RWL L GGIL DD
Sbjct: 798 EEVLENEHSDSLSVSSGVFSANHLPSPPGLTAVLRPYQLEGFRWLAFLRQHRLGGILADD 857
Query: 331 MGLGKTMQICGFLAGLFHSRLIKRA--------LVVAPKTLLSHWIKELTAVGLSAKIRE 382
MGLGKT+Q+ LA + +RA LVVAP +++ +W +E AK+
Sbjct: 858 MGLGKTVQVLALLAQAI-AEHEQRADHTGFAPFLVVAPTSVVGNWAQEAARFVPGAKVVT 916
Query: 383 YFGTCVKTRQYELQYVLQDKGVLLTTYDIVR--NNSKSLRGSSFI--SDEAGDDDAIWDY 438
+ K+ + + ++Q ++LT+Y + R + + G+ ++++ A W
Sbjct: 917 ITESTGKSGK-SIAELVQGAHLVLTSYALFRLDEDGYTEFGNHVPKNTEKSTSPRAGWGA 975
Query: 439 MILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKW 498
+ILDE +KN T+ K + + ++ I+GTP++NNL ELWAL L +
Sbjct: 976 LILDEAQFVKNTKTRAWKVARALNAQVKLAITGTPMENNLMELWALLAIVADGLFPSARM 1035
Query: 499 FKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATL 558
F++ Y P G D ++R LR R++P LRR K+ V +A L
Sbjct: 1036 FRDLYARPAESGEDPQVIER-----------LRRRVRPLMLRRTKDVV--------AADL 1076
Query: 559 SKKNEMIVWLRLTSCQRQLYEAFLNSE--IVLSAFDGSPLAALTILKKICDHPLLLTKRA 616
+KN++ V + LT+ R +Y+ L E VL + TI + L L +R
Sbjct: 1077 PEKNDVRVNVPLTTAHRHIYDMHLQRERQKVLGLLEDMDKNRFTIFQS-----LTLLRRL 1131
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
A D ++++P++ A VA S K+ +++ L L+ +
Sbjct: 1132 ALDA-----TLIDPDE----------YAGVA------------SAKLEYLVEHLPSLLGD 1164
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
GH VL+FSQ L I E + ++G +L +DGTT+ +R +++ DF EG AP+FL++
Sbjct: 1165 GHRVLVFSQFTGYLRTIAERLQAEGIDYLYLDGTTR--NRPQVLKDFAEG-TAPVFLISL 1221
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+ GG GL LT+AD ++DP WNP+ + Q+VDR +R+GQ++DV VYRL+ GT+EEK+
Sbjct: 1222 KAGGFGLNLTEADHCFIMDPWWNPAAEQQAVDRIHRLGQERDVHVYRLVAEGTIEEKVMD 1281
Query: 797 KQIFKGGLF 805
+ K LF
Sbjct: 1282 LKASKAALF 1290
>gi|444323056|ref|XP_004182169.1| hypothetical protein TBLA_0H03680 [Tetrapisispora blattae CBS 6284]
gi|387515215|emb|CCH62650.1| hypothetical protein TBLA_0H03680 [Tetrapisispora blattae CBS 6284]
Length = 1833
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 174/573 (30%), Positives = 283/573 (49%), Gaps = 69/573 (12%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-------- 345
+ +P I L +Q++G+ WL L+ GIL DDMGLGKT+Q +A
Sbjct: 1263 FKVPVAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIMASDQYLRKQE 1322
Query: 346 -----LFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQ 400
SR + +L++ P +L HW E KI Y G + + L+ L
Sbjct: 1323 YEETKSIESRPLP-SLIICPPSLTGHWESEFEQYAPFLKILVYAGG--PSVRVPLRSQLN 1379
Query: 401 DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE 460
+++T+YD+ RN+S L + +Y +LDEGH+IKN ++ AK++ +
Sbjct: 1380 ASDIIVTSYDVTRNDSDILSKLDY------------NYCVLDEGHIIKNSQSKLAKAVKQ 1427
Query: 461 IPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREK 520
I + HR+I++GTPIQNN+ ELW+LF++ P LG K F+E++ PI + +E+
Sbjct: 1428 IRANHRLILTGTPIQNNVVELWSLFDYLMPGFLGTEKSFQERFAKPIAASRNSRTSSKEQ 1487
Query: 521 RIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA 580
G+ + L +++ P+ LRRLK +V + L K + L+ Q+QLY+
Sbjct: 1488 EAGALALEALHKQVLPFMLRRLKEDVLQD--------LPPKIIQDYYCELSDLQKQLYQD 1539
Query: 581 FLNSE--IVLSAFDGSP--------LAALTILKKICDHPLLLTKRAAEDV---------- 620
F + +V + AL ++K+C+HP L+ +
Sbjct: 1540 FAKKQKNVVEKDIENPAEMDNKQHIFQALQYMRKLCNHPSLVLSPGHPQLAQVESYLKQT 1599
Query: 621 -LDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN 679
L+ D + P+ AL + + + E+D ++ ++ ++ L + + H
Sbjct: 1600 GLELHDIVNAPKLNAL--RTLLFECGIGEEDMEKKSTSSLQSQL-----LKTENVISQHR 1652
Query: 680 VLIFSQTRKMLNLIQESIGSK---GYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTS 736
LIF Q + ML++++ + K ++R+DG+ +R ++V F E LLT+
Sbjct: 1653 ALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSVDPRNRQEVVKKFNEDPSIDCLLLTT 1712
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+VGGLGL LT AD VI V+ WNP D Q++DRA+R+GQKK V VYR++T T+EEKI
Sbjct: 1713 KVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRIITKATLEEKIMG 1772
Query: 797 KQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
Q FK + T +Q + D +LL L
Sbjct: 1773 LQKFKMNIASTIVN--QQNSGLASMDTNQLLDL 1803
>gi|168025390|ref|XP_001765217.1| SNF2 superfamily chromatin remodeling protein [Physcomitrella patens
subsp. patens]
gi|162683536|gb|EDQ69945.1| SNF2 superfamily chromatin remodeling protein [Physcomitrella patens
subsp. patens]
Length = 2041
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 269/560 (48%), Gaps = 83/560 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y L + L +Q+EG+ WL L GIL DDMGLGKT+Q +A S ++
Sbjct: 1435 YKLQFPLNVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVA----SDTVE 1490
Query: 354 RA----------------LVVAPKTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYEL 395
RA LVV P TL+ HW E+ + + +Y G+ + +L
Sbjct: 1491 RANAFAVSKSPDVAPLPSLVVCPSTLVGHWAFEIEKFIPTDILNPLQYAGS--PQERIDL 1548
Query: 396 QYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRA 455
+ +++T+YD++R + L +W+Y ILDEGH+IK+ ++
Sbjct: 1549 RSRFPKHNIIITSYDVLRKDIDYLATQ------------VWNYCILDEGHIIKSAKSKIT 1596
Query: 456 KSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHA 515
+ + + HR+++SGTPIQNN+ ELW+LF+F P LG + F+ Y P+ +
Sbjct: 1597 MAAKRVQADHRLLLSGTPIQNNVLELWSLFDFLMPGFLGTERQFQANYGKPLQASREGKC 1656
Query: 516 LDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQR 575
+E G + L +++ P+ LRR K+EV A L K + L+ Q
Sbjct: 1657 SSKEAEAGVLAMEALHKQVMPFLLRRTKDEVL--------ADLPPKIIQDRYCDLSPLQL 1708
Query: 576 QLYEAFLNSEI--------------------VLSAFDGSPLAALTILKKICDHPLLLTK- 614
QLYE F +S+ SA AL L+K+C HPLL+ +
Sbjct: 1709 QLYEDFSHSQAKQEISSLVEHYGGPDASEARTASAPSTHVFQALQYLRKLCSHPLLVLED 1768
Query: 615 -RAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNIS-CKISFILSLLDK 672
R A +D A+A+ A + ++ Q D + C I +
Sbjct: 1769 ERQAARHVD-----------AIAQSGAKDLHELHHAPKLQALRDILEECGIGVPAAAESS 1817
Query: 673 LIPEG--HNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGD 727
PEG H VLIF+Q + L++I++ + KG +LR+DG+ ++ R IV F
Sbjct: 1818 ASPEGGHHRVLIFAQLKNFLDIIEKDLFQTHMKGVTYLRLDGSVESDKRFDIVKAFNSDP 1877
Query: 728 VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTC 787
+ LLT+ VGGLGL LT AD V+ ++ WNP D Q++DRA+R+GQK+ V V+RL+
Sbjct: 1878 TIDVLLLTTHVGGLGLNLTAADTVVFMEHDWNPMRDLQAMDRAHRLGQKRVVNVHRLIMR 1937
Query: 788 GTVEEKIYRKQIFKGGLFKT 807
GT+EEKI Q FK + T
Sbjct: 1938 GTLEEKIMSLQRFKISVANT 1957
>gi|50302399|ref|XP_451134.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640265|emb|CAH02722.1| KLLA0A03069p [Kluyveromyces lactis]
Length = 895
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 270/529 (51%), Gaps = 54/529 (10%)
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKE-------- 370
G I+ D+MGLGKT+Q + + R I + ++V P +L+++W E
Sbjct: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPG 386
Query: 371 -LTAVGLSAKIREYFGTCVK---TRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFIS 426
L+++ + K V + Q K VL+ +YD +R N + L+
Sbjct: 387 SLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNC---- 442
Query: 427 DEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFN 486
E G M+ DEGH +KN + +L I R+I+SGTPIQN+L E +AL N
Sbjct: 443 -EVG-------LMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLN 494
Query: 487 FCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEV 546
F P LLG F++ +ELPIL+ D A D E +G ++L + + +RR N +
Sbjct: 495 FSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNIL 554
Query: 547 FHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILK 603
+ L K E ++++ LT Q+ LY+ F+ S V G PL A+ +LK
Sbjct: 555 --------AKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLK 606
Query: 604 KICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKI 663
K+C+HP LL +ED+ G + ++ P+D + D + S K
Sbjct: 607 KLCNHPDLL--ELSEDI-PGSEELI-PDDYQSS-------VDSRTSRNRSVIQTAFSSKF 655
Query: 664 SFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVND 722
S + L K+ E ++ +++ S + L+LI++ S Y LR+DGT + R K+V+
Sbjct: 656 SVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDR 715
Query: 723 FQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 781
F + + IFLL+S+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKKD +
Sbjct: 716 FNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFI 775
Query: 782 YRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
YR ++ GT+EEKI+++Q K L + KE + R FS +L++L L
Sbjct: 776 YRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKL 824
>gi|311063653|ref|YP_003970378.1| helicase [Bifidobacterium bifidum PRL2010]
gi|310865972|gb|ADP35341.1| Helicase [Bifidobacterium bifidum PRL2010]
Length = 1339
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 283/568 (49%), Gaps = 79/568 (13%)
Query: 270 LDDYSDDSVLEDEGSITLSGPR----STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGG 325
LD DD + + L G R STY +P + ++L P+Q EG RWL ++ +G GG
Sbjct: 777 LDHQVDDDAKDASFTAYLDGLRVIDPSTYRVPAALVSVLRPYQAEGFRWLNAVCDKGFGG 836
Query: 326 ILGDDMGLGKTMQICGFLAGLF-HSRLIKRA-LVVAPKTLLSHWIKELTAVGLSAKIREY 383
IL D+MGLGK++Q+ L SR R L+V P +L+ +W+ E+ ++
Sbjct: 837 ILADEMGLGKSVQLLSLLLARHKESRAEHRPNLIVCPASLVYNWVAEVAKHTPELRVEAI 896
Query: 384 FGTCVKTRQY--ELQYVLQDKGV----------------------LLTTYDIVRNNSKSL 419
GT + R ++ QD GV L+T+YD++R +
Sbjct: 897 AGTKPERRAMLDGVRAAQQDTGVSPTRESARPASAAAASDDVPDVLVTSYDLLRRDIDDY 956
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLK 479
G F M LDE IKN +T+ +K++ + + HR ++GTPI+N L
Sbjct: 957 AGLEFYC------------MTLDEAQYIKNAATKVSKAVRSVTAVHRFALTGTPIENRLS 1004
Query: 480 ELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFL 539
ELW++F+F P +LG F+E++E+P+L G++ K+L+ + P+ L
Sbjct: 1005 ELWSIFDFLMPGMLGSYAHFRERFEMPVLSGDET------------AQKKLQSFVGPFIL 1052
Query: 540 RRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF---LNSEIVL---SAFDG 593
RRLK++V + L K E ++ ++L QR+LY A L S I+ + F+
Sbjct: 1053 RRLKSQVLKD--------LPDKIENVITVQLQGEQRKLYAALEQQLRSVILRQRPADFNT 1104
Query: 594 SP---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
LA LT L+++C P L+ + A DG S L+ + A+ + ++
Sbjct: 1105 GKIQILAQLTRLRQVCCDPRLIYENA-----DGHASALSAGVQSAAKDPQQSVKQPVKQS 1159
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
+ + S K+ I+ L+D G +LIFSQ L+LI + + + G ++ I G
Sbjct: 1160 --KARKTVSSAKLDAIIELVDSCRDAGRKMLIFSQFTSYLDLIAQRLRADGVEYDMITGA 1217
Query: 711 TKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
T R+++V+ F D P+FL++ + G GL LT A V+ DP WN + +Q+ DRA
Sbjct: 1218 TPKKRRLELVDRFN-ADATPVFLISLKAGNTGLNLTGACVVVHADPWWNAAAQDQATDRA 1276
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
+RIGQ +DV VY+++ T+EE+I Q
Sbjct: 1277 HRIGQTQDVNVYQIVAKDTIEERILNLQ 1304
>gi|398393688|ref|XP_003850303.1| chromatin remodeling complex SWI/SNF component SWI2 [Zymoseptoria
tritici IPO323]
gi|339470181|gb|EGP85279.1| chromatin remodeling complex SWI/SNF component SWI2 [Zymoseptoria
tritici IPO323]
Length = 1341
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 268/520 (51%), Gaps = 73/520 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 471 VGGQLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQHGPYLVI 530
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTC--VKTRQYELQYVLQDKGVLLTTYDIVRNNS 416
P + L++W E S Y G KT+Q +++Y + VLLTTY+ +
Sbjct: 531 VPLSTLTNWNSEFERWAPSVSRIVYKGPPNQRKTQQQQIRY--GNFQVLLTTYEFI---- 584
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQ 475
I D W +MI+DEGH +KN +++ + ++ + +R+I++GTP+Q
Sbjct: 585 --------IKDRPILSKVKWLHMIVDEGHRMKNANSKLSNTITNYYHTRYRLILTGTPLQ 636
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRER 533
NNL ELW++ NF P + F E + P G DK L E+++ V + L +
Sbjct: 637 NNLTELWSMLNFVLPTIFKSATSFDEWFNTPFANTGGQDKMDLTEEEKL--LVIRRLHKV 694
Query: 534 IQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY-EAFLNSEIVLSAFD 592
++P+ LRRLK +V E D L K E ++ L++ Q +LY + L++ I + D
Sbjct: 695 LRPFLLRRLKKDV--EKD------LPDKQERVIKCNLSALQAKLYKQLMLHNRINVMGAD 746
Query: 593 GSPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
G L L+K+C+HP + E+V D M NP
Sbjct: 747 GKKTGMRGLSNMLMQLRKLCNHPFVF-----EEVEDQM----NPSKMT------------ 785
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G
Sbjct: 786 ----------NDLIWRTAGKFELLDRVLPKFFATGHRVLMFFQMTQIMNIMEDFLRFRGI 835
Query: 703 KFLRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
K+LR+DG TKA DR +++ F G IFLL+++ GGLGL L AD VI+ D WNP
Sbjct: 836 KYLRLDGGTKADDRSELLKLFNAPGSEYDIFLLSTRAGGLGLNLQTADTVIIYDSDWNPH 895
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL+T +VEEKI + +K
Sbjct: 896 QDLQAQDRAHRIGQKNEVRILRLITTNSVEEKILERAQYK 935
>gi|169600905|ref|XP_001793875.1| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15]
gi|160705541|gb|EAT90036.2| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15]
Length = 831
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 284/566 (50%), Gaps = 64/566 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++L+ + + G I+ D+MGLGKT+Q +
Sbjct: 202 PRVPVVIDPRLSKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCIALMW 261
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL--- 395
L I++ ++ P +L+ +W EL L F K + EL
Sbjct: 262 TLLKQSPDAGKSTIQKCVIACPSSLVRNWANELVK-WLGPDAVTPFAIDGKASKDELIQQ 320
Query: 396 --QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
Q+ + + VL+ +Y+ +R L F + G M+ DEGH +K
Sbjct: 321 IRQWSIASGRSVVRPVLIVSYETLR-----LYVEEFGQTQIG-------LMLCDEGHRLK 368
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + +L + R+I+SGTPIQN+L E +AL NF P LG F++ YE+PIL
Sbjct: 369 NGDSLTFTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKHYEIPIL 428
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D + D + + G+ EL + + +RR N++ S L K E +V+
Sbjct: 429 RGRDANGTDEDVKKGNERLTELLGLVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 480
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q++LY F+ S V S G PL + +LKK+C+HP LL +D L G +
Sbjct: 481 NLAPFQKELYNHFIKSPDVQSLLRGKGSQPLKVIGMLKKLCNHPDLL--ELPQD-LPGCE 537
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
L PED D +D +E S K+ + +L ++ E ++ +++ S
Sbjct: 538 HTL-PEDFV--------PKDARGRD--REVKVWYSGKMLVLDRMLARIRAETNDKIVLIS 586
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLG 742
+ L++ S+GY LR+DGT S R K+V+ F + + P +FLL+S+ GG G
Sbjct: 587 NYTQTLDIFAALCRSRGYGCLRLDGTMNVSKRQKLVDKFNDPE-GPEFVFLLSSKAGGCG 645
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
L L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR +T GT+EEK++++Q K
Sbjct: 646 LNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQ 705
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELL 827
L + E + R+FS LREL
Sbjct: 706 SLSSCVVDSAEDVERHFSLDSLRELF 731
>gi|330930041|ref|XP_003302867.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1]
gi|311321495|gb|EFQ89043.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1]
Length = 812
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 179/566 (31%), Positives = 286/566 (50%), Gaps = 64/566 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++L+ + + G I+ D+MGLGKT+Q +
Sbjct: 202 PRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCIALMW 261
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL--- 395
L I++ ++ P +L+ +W EL L F K + EL
Sbjct: 262 TLLKQSPEAGKSTIQKCVIACPSSLVRNWANELVK-WLGKDAVTPFAIDGKASKEELIQQ 320
Query: 396 --QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
Q+ + + VL+ +Y+ +R L F G M+ DEGH +K
Sbjct: 321 IRQWSIASGRAVVRPVLIVSYETLR-----LYAEEFGQTPIG-------LMLCDEGHRLK 368
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + +L + R+I+SGTPIQN+L E +AL NF P LG F++ YE+PIL
Sbjct: 369 NGDSLTFTALNNLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKHYEIPIL 428
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
+G D + D + + G+ EL + + +RR N++ S L K E +V+
Sbjct: 429 KGRDANGTDEDVKKGTERLTELLGLVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 480
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q+ LY F+ S V S G PL + +LKK+C+HP LL ED L G +
Sbjct: 481 NLAPFQKDLYNHFIKSPDVQSLLRGKGSQPLKVIGMLKKLCNHPDLLN--LPED-LPGCE 537
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
+ L P+D +K D +D +E S K++ + +L ++ E ++ +++ S
Sbjct: 538 NTL-PDD--FVQK------DARGRD--REVKTWYSGKMAVLDRMLARIRAETNDKIVLIS 586
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLG 742
+ L++ S+GY R+DGT S R K+V+ F + + +P +FLL+S+ GG G
Sbjct: 587 NYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLVDKFNDPE-SPEFVFLLSSKAGGCG 645
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
L L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR +T GT+EEK++++Q K
Sbjct: 646 LNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQ 705
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELL 827
L + E + R+FS LREL
Sbjct: 706 SLSSCVVDSAEDVERHFSLDSLRELF 731
>gi|255718981|ref|XP_002555771.1| KLTH0G17028p [Lachancea thermotolerans]
gi|238937155|emb|CAR25334.1| KLTH0G17028p [Lachancea thermotolerans CBS 6340]
Length = 1000
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 181/552 (32%), Positives = 275/552 (49%), Gaps = 58/552 (10%)
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKE-------- 370
G I+ D+MGLGKT+Q + L I + ++V P +L+++W E
Sbjct: 433 GCIMADEMGLGKTLQCIALMWTLLRQGPQGKPTIDKCIIVCPSSLVNNWANEIVKWLGRG 492
Query: 371 -LTAVGLSAKIREYF-GTCVKT-RQYEL-QYVLQDKGVLLTTYDIVRNNSKSLRGSSFIS 426
L ++ + K GT + R + L Q K VL+ +Y+ +R N + LR
Sbjct: 493 TLASLPIDGKKSSLSNGTVAQAVRSWALAQGRSVVKPVLIISYETLRRNVEHLRHCDV-- 550
Query: 427 DEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFN 486
++ DEGH +KN +Q SL I R+I+SGTPIQN+L E +AL N
Sbjct: 551 ----------GLLLADEGHRLKNADSQTFTSLNSIRCPRRVILSGTPIQNDLSEYFALLN 600
Query: 487 FCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEV 546
F P LLG F++ +ELPILRG D A+D + + G + L + + +RR N++
Sbjct: 601 FSNPGLLGSRLEFRKNFELPILRGRDADAMDEDVKKGDERLQALSTIVSKFIIRR-TNDI 659
Query: 547 FHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSE----IVLSAFDGSPLAALTIL 602
S L K E ++++ L QR LYE L S +V A PL + +L
Sbjct: 660 L-------SKYLPCKYEHVIFVNLKPFQRSLYEHMLKSRDIKLLVKDAKHTQPLKHIGVL 712
Query: 603 KKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCK 662
KK+C+HP LL R +D+ D M PED + + K E S K
Sbjct: 713 KKLCNHPDLL--RLPDDIEGSEDLM--PED---------YQSSTVSKRGRSELQTWHSGK 759
Query: 663 ISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVN 721
S + L K+ E + ++I S + L+LI++ S Y +R+DGT + R K+V+
Sbjct: 760 FSILGRFLHKIKTESDDKIVIISNYTQTLDLIEKMCRSSTYPVVRLDGTMTINKRQKLVD 819
Query: 722 DFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVV 780
F + + IFLL+S+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKKD
Sbjct: 820 RFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCF 879
Query: 781 VYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL-PKQGFDVSL 838
+YR + G++EEKIY++Q K L + KE + R FS +L++L L P D
Sbjct: 880 IYRFICTGSIEEKIYQRQSMKMSLSSCVVDEKEDVERLFSAGNLKQLFELRPDTNCDTHE 939
Query: 839 TQQQLHEEHGDQ 850
T ++G Q
Sbjct: 940 TYHCKRCKNGKQ 951
>gi|321263831|ref|XP_003196633.1| chromatin structure remodeling complex protein STH1 [Cryptococcus
gattii WM276]
gi|317463110|gb|ADV24846.1| Chromatin structure remodeling complex protein STH1, putative
[Cryptococcus gattii WM276]
Length = 1430
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 262/506 (51%), Gaps = 62/506 (12%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVA 359
G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 563 GGTLKDYQVKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLIEKKKQPGPFLVIV 622
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
P + L++W E + + G+ R+ + D V LTTY+ + L
Sbjct: 623 PLSTLTNWTMEFERWAPAVRTLILKGSPAVRREAYPRLRAVDFQVCLTTYEYIIKERPLL 682
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPIQNNL 478
S I W +MI+DEGH +KN ++ +++L E S+ +R+I++GTP+QNNL
Sbjct: 683 ---SRIK---------WIHMIIDEGHRMKNVKSKLSQTLNEYYSSRYRLILTGTPLQNNL 730
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILR-GNDKHALDREKRIGSAVAKELRERIQPY 537
ELWAL NF P++ K F E + P G +K ++ E+ + V K L + ++P+
Sbjct: 731 PELWALLNFVLPKIFNSVKSFDEWFNAPFANTGGEKMEMNEEEAL--LVVKRLHKVLRPF 788
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD-GSPL 596
LRRLK +V E L K E +++ ++++ Q +LYE+ + + + P
Sbjct: 789 LLRRLKKDVESE--------LPDKVEKVIYTKMSALQWKLYESVQKYKTLPTDMSVAKPQ 840
Query: 597 A------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
AL L+KIC+HP + + ED G N D
Sbjct: 841 KRQNLQNALMQLRKICNHPYVF-REVDEDFTVG-----NTTD------------------ 876
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
EQ ++ K + +L KL GH VLIF Q +++ ++ + +G+K+ R+DG+
Sbjct: 877 ---EQIIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDYRGWKYCRLDGS 933
Query: 711 TKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
TKA DR +++ F + + +P +F+L+++ GGLGL L AD VI+ D WNP D Q+ D
Sbjct: 934 TKAEDRQTLLSTFNDPN-SPYQVFILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQD 992
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKI 794
RA+RIGQKK+V V RL++ GTVEE +
Sbjct: 993 RAHRIGQKKEVRVLRLISSGTVEELV 1018
>gi|115389990|ref|XP_001212500.1| DNA repair and recombination protein RAD54 [Aspergillus terreus
NIH2624]
gi|114194896|gb|EAU36596.1| DNA repair and recombination protein RAD54 [Aspergillus terreus
NIH2624]
Length = 821
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 173/573 (30%), Positives = 279/573 (48%), Gaps = 70/573 (12%)
Query: 288 SGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGF 342
S P+ ++ ++ +L PHQ EG+++L+ G I+ D MGLGKT+Q
Sbjct: 212 SRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISL 271
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL- 395
+ L I++ ++ P +L+ +W EL L F K + EL
Sbjct: 272 MWTLLKQSPEAGKTTIQKCIIACPSSLVGNWANEL-GKWLGKDAITPFAVDGKATKTELT 330
Query: 396 ----QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
Q+ + + VL+ +Y+ +R +L+ S ++ DEGH
Sbjct: 331 TQIKQWAIASGRSVVRPVLIVSYETLRLYVDALKDSPI------------GLLLCDEGHR 378
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN + +L + R+I+SGTPIQN+L E +AL NF P+LLG F++++ELP
Sbjct: 379 LKNKDSLTWTALNSLNVQRRVILSGTPIQNDLTEYFALLNFANPDLLGTQNEFRKRFELP 438
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG D + +++ G EL + + +RR N++ S L K E +V
Sbjct: 439 ILRGRDAAGTEEDRKKGDERLAELSSIVNKFIIRR-TNDIL-------SKYLPVKYEHVV 490
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L+ Q LY F+ S + S G PL A+ ILKK+C+HP LL + L G
Sbjct: 491 FCNLSPFQLDLYNHFIQSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLLN---LSNDLPG 547
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GH 678
+ P+D E + + +I S + +LD+++
Sbjct: 548 CEHAF-PDDYVPPEG--------------RGRDRDIKSWYSGKMMVLDRMLARIRQDTND 592
Query: 679 NVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQ 737
+++ S + L+L ++ S+GY LR+DGT R K+V+ F + D +FLL+S+
Sbjct: 593 KIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVKKRQKLVDKFNDPDGEEFVFLLSSK 652
Query: 738 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK 797
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++
Sbjct: 653 AGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQR 712
Query: 798 QIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
Q K L + E + R+FS + LREL
Sbjct: 713 QSHKQSLSSCVVDSAEDVERHFSLESLRELFQF 745
>gi|380030207|ref|XP_003698745.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A containing DEAD/H box
1-like isoform 2 [Apis florea]
Length = 851
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 274/524 (52%), Gaps = 55/524 (10%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA----LVVA 359
L P+Q GL WL +H Q GIL D+MGLGKT+Q+ FL L + L L+V
Sbjct: 283 LAPYQMVGLNWLAVMHAQNVNGILADEMGLGKTVQVIAFLTYLKEAGLKGEKDGPHLIVV 342
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV---LQDKGVLLTTYDIVRNNS 416
P + + +W EL K+ +Y+GT + ++ + L D VLLTTY+++ +
Sbjct: 343 PSSTMENWNNELERWSPDLKVVQYYGTQEERKEMRFGWRNGDLDDVDVLLTTYNLISSTP 402
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQN 476
+ R + Y++ DE H++KN T R ++L+ I + HRI+++GTP+QN
Sbjct: 403 EERRLFRVMP---------LYYVVFDEAHMLKNMGTIRYENLVRINAKHRILLTGTPLQN 453
Query: 477 NLKELWALFNFCCPELLGDNK-----WFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
NL EL +L F P L + F + +LP ++ N + L ++++ +A +
Sbjct: 454 NLLELMSLLIFVMPSLFAGKQADLKSLFSKNPKLPSIKKNAEQPLFEQEQVKNA-----K 508
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
+ ++P+ LRRLK EV + L +K E ++ + Q+++Y + +E A
Sbjct: 509 QIMRPFVLRRLKAEVLRD--------LPEKKERMIKCPMIEKQQKMYTNLI-AEFSAEAD 559
Query: 592 DGSPLAALTI---LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
+ + + + L+K+ +HPLL+ + L + + L E + + D+
Sbjct: 560 QSTEVNGIGMMMQLRKLANHPLLVRDYYNKSKLKVISNRLAKEHSYKQKNADYVFEDLQW 619
Query: 649 KDDFQ-EQHDNISCKISFI------------LSLLDKLIP----EGHNVLIFSQTRKMLN 691
D+Q Q I+ + L +LD+L+P EGH VLIFSQ +L+
Sbjct: 620 MSDYQINQLTRTYKSIAGLGLPQELIPQAGKLKILDELLPKLKEEGHRVLIFSQFTMILD 679
Query: 692 LIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRV 751
+++E + +G +LR+DG+T +DR ++N + E + IFLL+++ GGLG+ LT AD V
Sbjct: 680 ILEEYLTIRGQTYLRLDGSTPVTDRQCLINQYMEDENIFIFLLSTKAGGLGINLTAADTV 739
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
I+ D +NP D Q+ DR +R+GQK+ V + RL++ T+EE +Y
Sbjct: 740 IIHDIDFNPYNDKQAEDRCHRVGQKRPVSIIRLLSEDTIEEGMY 783
>gi|326484392|gb|EGE08402.1| DNA repair and recombination protein RAD54 [Trichophyton equinum
CBS 127.97]
Length = 820
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 286/568 (50%), Gaps = 64/568 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++L+ G I+ D MGLGKT+Q +
Sbjct: 213 PKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNAHGCIMADGMGLGKTLQCITLMW 272
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYF--GTCVKT------ 390
L +++A++ P TL+ +W EL I + G KT
Sbjct: 273 TLLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELISQL 332
Query: 391 RQYEL---QYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLI 447
RQ+ + + V+ + VL+ +Y+ +R NS LR D ++ DEGH +
Sbjct: 333 RQWAIASGRSVV--RPVLIVSYETLRMNSDELR------------DTQIGLLLCDEGHRL 378
Query: 448 KNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPI 507
KN +Q +L ++ R+I+SGTPIQN+L E ++L +F P +LG F + YE+PI
Sbjct: 379 KNADSQTYVALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPI 438
Query: 508 LRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVW 567
LRG D D +++ G+ EL + + +RR N++ S L K E +V+
Sbjct: 439 LRGRDADGTDEQQKKGNERLAELLNLVNKFIIRR-SNDLL-------SKYLPVKYEHVVF 490
Query: 568 LRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGM 624
L Q LY F+ S + S G PL A+ ILKK+C+HP LL + +ED L G
Sbjct: 491 CNLAPFQLDLYNHFIQSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLL--KLSED-LPGC 547
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIF 683
+ PED M +++ D +E S K+ + +L ++ + ++ +++
Sbjct: 548 EQYF-PED--------MMVSNGRRGD--REVKTWYSGKMMVLDRMLARIRQDTNDKIVLI 596
Query: 684 SQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLG 742
S + L+L + ++ Y +R+DGT R K+V+ F + + +FLL+S+ GG G
Sbjct: 597 SNYTQTLDLFERLCRARAYGCIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCG 656
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
+ L A+R+++ DP WNP+ D Q++ R +R GQ KD VYR + GT+EEKI+++Q K
Sbjct: 657 INLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQ 716
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELLSL 829
L + E + R+FS LREL
Sbjct: 717 SLSSCVVDSAEDVERHFSLDSLRELFQF 744
>gi|254570653|ref|XP_002492436.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|238032234|emb|CAY70235.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|328353550|emb|CCA39948.1| DNA repair and recombination protein RAD54 and RAD54-like protein
[Komagataella pastoris CBS 7435]
Length = 838
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 181/610 (29%), Positives = 296/610 (48%), Gaps = 84/610 (13%)
Query: 279 LEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGL 333
+ +GS P ++ K+ +L PHQ G+++L+ + KG I+ D+MGL
Sbjct: 222 IAKDGSSLKKYPNVPVVIDPKLAKILRPHQISGVKFLFRCTSGLVDASAKGCIMADEMGL 281
Query: 334 GKTMQICGFLAGLFH-----SRLIKRALVVAPKTLLSHWIKEL-------TAVGLSAKIR 381
GKT+Q L L ++ I++A+VV P +L+ +W E T L+ +
Sbjct: 282 GKTLQCIALLWTLLRQSPRGTKTIEKAIVVCPSSLVKNWANEFDKWLGKGTLTPLAIDGK 341
Query: 382 EYFGTCVKTRQYELQYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIW 436
G+ + ++ Q+ + + VL+ +Y+ +R N +SL+G+
Sbjct: 342 SAKGSTISSQLS--QWAMATGRNIVRPVLIVSYETLRRNVESLKGTKV------------ 387
Query: 437 DYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDN 496
M+ DEGH +KN + +L + R+I+SGTPIQN+L E ++L F P LLG
Sbjct: 388 GLMLADEGHRLKNGDSLTFTALNSLDCERRVILSGTPIQNDLSEYFSLLTFANPGLLGTR 447
Query: 497 KWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSA 556
F++ YE PILRG D A D+E+ G KEL E + + +RR N++ S
Sbjct: 448 NEFRKNYENPILRGRDSLADDKEREKGDQKLKELTEIVARFIIRR-TNDIL-------SK 499
Query: 557 TLSKKNEMIVWLRLTSCQRQLYEAFLN----SEIVLSAFDGS-PLAALTILKKICDHPLL 611
L K E +++ L+ Q+ LY+ F S++V G+ L ++ +LKK+C HP L
Sbjct: 500 YLPVKYEYVIFCNLSETQKSLYQRFTASKSISKLVKEVGGGAQSLQSIGLLKKLCTHPNL 559
Query: 612 LTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNI---------SCK 662
L PED E L DD+ H N S K
Sbjct: 560 LNL---------------PEDIEGCENLL--------PDDYDYGHGNRRNREVQVWHSSK 596
Query: 663 ISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVN 721
+ L K+ E ++ ++I S + L+LI++ S Y LR+DGT + R K+V+
Sbjct: 597 FLILQRFLYKINKETNDKIVIISNYTQTLDLIEKLCISSRYGSLRLDGTMNINKRQKLVD 656
Query: 722 DFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVV 780
F + +FLL+S+ GG G+ L A+R+I+VDP WNP++D Q++ R +R GQ K+
Sbjct: 657 KFNNPEGKEFVFLLSSKAGGCGINLIGANRLILVDPDWNPASDQQALARVWRDGQTKNCF 716
Query: 781 VYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSLPKQGFDVSLT 839
+YR + G++EEKI+++Q K L + + + R FS +L++L + F + +
Sbjct: 717 IYRFIATGSIEEKIFQRQSAKLQLSSCVVDSNDDVERLFSADNLKQLFQFKENTFSETHS 776
Query: 840 QQQLHEEHGD 849
H D
Sbjct: 777 TYNCKRCHPD 786
>gi|170041242|ref|XP_001848380.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
gi|167864826|gb|EDS28209.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
Length = 787
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 292/558 (52%), Gaps = 65/558 (11%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGK-----GGILGDDMGLGKTMQICGFLAGLFHSRL--- 351
+GN+L PHQREG+R+++ GK G I+ D+MGLGKT+Q L L
Sbjct: 135 LGNILRPHQREGVRFMYEC-VTGKRGDFQGCIMADEMGLGKTLQCITLLWTLLRQSPDCK 193
Query: 352 --IKRALVVAPKTLLSHWIKELTA-VGLSAKIREYFGTCVK--TRQYEL----QYVLQDK 402
I +A++V P +L+ +W KE +G G + T+Q E Q Q
Sbjct: 194 PEINKAVIVCPSSLVKNWYKEFGKWLGCRVNCLSIDGGSKEQTTKQLEQFMANQSARQGT 253
Query: 403 GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP 462
VL+ +Y+ R + L S E G ++ DEGH +KN ++L+ +
Sbjct: 254 PVLIISYETFRLYAGILNNS-----EVGA-------VLCDEGHRLKNCENLTYQALMGLK 301
Query: 463 SAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRI 522
+ R+++SGTPIQN+L E ++L +F P +LG + F+ ++E PILRG D ++ + E+
Sbjct: 302 TKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSSNEFRRQFENPILRGQDANSTESEREK 361
Query: 523 GSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL 582
+ +EL + +RR + + + L K EM+V +++T Q +LY++FL
Sbjct: 362 ATERLQELSALVNRCMIRRTSSLL--------TKYLPIKFEMVVCVKMTDVQTELYKSFL 413
Query: 583 NSE-IVLSAFDGSPLAA-------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAA 634
S+ I S + S + A +T LKK+C+HP L+ ++ E +G + A
Sbjct: 414 QSDSIRRSVLEKSEVKASLTALSNITALKKLCNHPDLVYEKIKERA-EGFEEAYKILPAN 472
Query: 635 LAEKLAMHIADVAEKDDFQEQHDNISCKISFI-LSLLDKLIPEGHNVLIFSQTRKMLNLI 693
+ K + +F + + C ++ I ++ DK++ + S + L+L
Sbjct: 473 YSAKEV--------RPEFGGKLMVLDCMLASIKMNTNDKIV-------LVSNYTQTLDLF 517
Query: 694 QESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVI 752
++ +GY ++R+DGT R K+V++F + D IF+L+S+ GG GL L A+R++
Sbjct: 518 EKLCRKRGYGYVRLDGTMTIKKRGKVVDEFNKPDSKEFIFMLSSKAGGCGLNLIGANRLV 577
Query: 753 VVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHK 812
+ DP WNP+ D Q++ R +R GQKK +YRL+ G++EEKI+++Q K L T ++
Sbjct: 578 MFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLATGSIEEKIFQRQTHKKALSNTVVDND 637
Query: 813 EQ-IRYFSQQDLRELLSL 829
E R+F+Q DL++L L
Sbjct: 638 EDGQRHFTQDDLKDLFRL 655
>gi|453084606|gb|EMF12650.1| DNA repair and recombination protein RAD54 [Mycosphaerella
populorum SO2202]
Length = 714
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 169/569 (29%), Positives = 280/569 (49%), Gaps = 70/569 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++L+ + +G I+ D+MGLGKT+Q +
Sbjct: 108 PKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDANAEGCIMADEMGLGKTLQCITLMW 167
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++ ++ P +L+ +W EL L E F K + ++
Sbjct: 168 TLLKQSPDAGKSTIQKCIIACPASLVRNWANELVK-WLGEGAIEPFAVDGKASKEQMTQQ 226
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
++ + VL+ +Y+ +R LR + M+ DEGH +K
Sbjct: 227 MRAWASASGRAVVRPVLIISYETLRLYVDELRNTPI------------GLMLCDEGHRLK 274
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + R+I+SGTPIQN+L E ++L NF P LG F++++E PIL
Sbjct: 275 NSESQTYMALAGLNVKKRVILSGTPIQNDLSEYFSLLNFANPGYLGTQADFRKQFENPIL 334
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D + +++ G KEL + + +RR N++ S L K E +V+
Sbjct: 335 RGRDADGTEADRQKGDERLKELLTLVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 386
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + S G PL A+ +LKK+C+HP LL
Sbjct: 387 NLAPFQLDLYNYFIKSPEIQSLLRGKGSQPLKAIGLLKKLCNHPDLLNL----------- 435
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
P+D +E+ H + D + + ++ S + +LD+++ +
Sbjct: 436 ----PDDLPGSEE---HFPEEYVPKDQRGRDREVNPVYSGKMQVLDRMLARIRMDSNDKI 488
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
++ S + L++ ++ S+ Y LR+DGT + R K+V+ F + + A +FLL+S+ G
Sbjct: 489 VLISNYTQTLDVFEKLCRSRSYGCLRLDGTMNVNKRQKLVDKFNDPNGAEFVFLLSSKAG 548
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G GL L A+R+I+ DP WNP+ D Q++ R +R GQKKD VYR M GT+EEKI+++Q
Sbjct: 549 GCGLNLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFMAAGTIEEKIFQRQS 608
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS + LREL
Sbjct: 609 HKQALSSCVVDSAEDVERHFSTESLRELF 637
>gi|405123294|gb|AFR98059.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Cryptococcus neoformans var. grubii H99]
Length = 1430
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 262/506 (51%), Gaps = 62/506 (12%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVA 359
G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 563 GGTLKDYQVKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLIEKKKQPGPFLVIV 622
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
P + L++W E + + G+ R+ + D V LTTY+ + L
Sbjct: 623 PLSTLTNWTMEFERWAPAVRTLILKGSPAVRREAYPRLRAVDFQVCLTTYEYIIKERPLL 682
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPIQNNL 478
S I W +MI+DEGH +KN ++ +++L E S+ +R+I++GTP+QNNL
Sbjct: 683 ---SRIK---------WIHMIIDEGHRMKNVKSKLSQTLNEYYSSRYRLILTGTPLQNNL 730
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILR-GNDKHALDREKRIGSAVAKELRERIQPY 537
ELWAL NF P++ K F E + P G +K ++ E+ + V K L + ++P+
Sbjct: 731 PELWALLNFVLPKIFNSVKSFDEWFNAPFANTGGEKMEMNEEEAL--LVVKRLHKVLRPF 788
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD-GSPL 596
LRRLK +V E L K E +++ ++++ Q +LYE+ + + + P
Sbjct: 789 LLRRLKKDVESE--------LPDKVEKVIYTKMSALQWKLYESVQKYKTLPTDMSVAKPQ 840
Query: 597 A------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
AL L+KIC+HP + + ED G N D
Sbjct: 841 KRQNLQNALMQLRKICNHPYVF-REVDEDFTVG-----NTTD------------------ 876
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
EQ ++ K + +L KL GH VLIF Q +++ ++ + +G+K+ R+DG+
Sbjct: 877 ---EQIIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDYRGWKYCRLDGS 933
Query: 711 TKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
TKA DR +++ F + + +P +F+L+++ GGLGL L AD VI+ D WNP D Q+ D
Sbjct: 934 TKAEDRQTLLSTFNDPN-SPYQVFILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQD 992
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKI 794
RA+RIGQKK+V V RL++ GTVEE +
Sbjct: 993 RAHRIGQKKEVRVLRLISSGTVEELV 1018
>gi|429861210|gb|ELA35910.1| rsc complex subunit [Colletotrichum gloeosporioides Nara gc5]
Length = 1430
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 273/522 (52%), Gaps = 77/522 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + + LV+
Sbjct: 546 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLVTYLIERKKQEGPYLVI 605
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G + +Q + + VLLTTY+ +
Sbjct: 606 VPLSTLTNWTLEFEKWAPSVSKIVYKGPPLARKQQQDKIRQGRFQVLLTTYEYI------ 659
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN +++ ++ + + R+I++GTP+QNN
Sbjct: 660 ------IKDRPILSKIKWFHMIIDEGHRMKNQNSKLTSTIQQYYHTRFRLILTGTPLQNN 713
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWA+ NF P + K F E + P G DK L E++I V + L + ++
Sbjct: 714 LTELWAMLNFTLPTIFKSAKTFDEWFNTPFANTGGQDKMDLTEEEQI--LVIRRLHKVLR 771
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + +++I++S G
Sbjct: 772 PFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQSKLYKQMVTHNKILVSDGQGG 823
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
A + L+K+C+HP V D ++++LNP M++++
Sbjct: 824 KTGARGLSNMIMQLRKLCNHPF---------VFDEVENLLNP----------MNVSN--- 861
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
++ + + LLD+++P+ GH VL+F Q +++++++ + + K+
Sbjct: 862 ---------DLLWRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDYLRYRNMKY 912
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
+R+DGTTK+ +R ++ +F AP +FLL+++ GGLGL L AD VI+ D WN
Sbjct: 913 MRLDGTTKSDERSDLLREFN----APNSEYFMFLLSTRAGGLGLNLQTADTVIIYDSDWN 968
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
P D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 969 PHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFK 1010
>gi|374574925|ref|ZP_09648021.1| DNA/RNA helicase, superfamily II, SNF2 family [Bradyrhizobium sp.
WSM471]
gi|374423246|gb|EHR02779.1| DNA/RNA helicase, superfamily II, SNF2 family [Bradyrhizobium sp.
WSM471]
Length = 1107
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 259/517 (50%), Gaps = 75/517 (14%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR--LIK 353
LP L P+Q +G+ WL L G GGIL DDMGLGKT+QI +A L +R L
Sbjct: 638 LPPTFRATLRPYQAQGVAWLDLLRESGLGGILADDMGLGKTVQILALIA-LEKARGHLAN 696
Query: 354 RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVR 413
LVVAP +L+++W E K+ G K R + + ++LTTY ++
Sbjct: 697 PVLVVAPTSLMTNWSAEAQKFAPELKVLVLHGADRKHRFP----AIAEHDLVLTTYPLIA 752
Query: 414 NNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTP 473
+ + L W +LDE +KNP + L E + HR ++GTP
Sbjct: 753 RDREILLARE------------WHIAVLDEAQTVKNPDAATTRFLRETKAQHRFCLTGTP 800
Query: 474 IQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRER 533
++N+L ELW++ +F P LGD F ++ PI EKR L +R
Sbjct: 801 MENHLGELWSIMSFVNPGFLGDKAAFSRQWRTPI-----------EKRADKVRTAALAQR 849
Query: 534 IQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG 593
++P+ LRR K EV + L K+E++ + L QR LY++
Sbjct: 850 VKPFLLRRTKTEV--------ATDLPAKSEIVETIALEGPQRDLYDSI------------ 889
Query: 594 SPLAALTILKKICDHPLLLTKRA-AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
LT+ +K+ + + KR A+ + ++++L A L + + D E+
Sbjct: 890 ----RLTMSRKVREA---IAKRGLAKSHIVVLEALLRMRQACCDPAL-LKLNDGVERP-- 939
Query: 653 QEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
S K+ ++ ++ +L+ EG ++IFSQ ML+LI++ + + G ++ + G T+
Sbjct: 940 -------SAKLDRLIDMVGELLSEGRKIIIFSQFTSMLDLIRQRVETAGLRYSILTGQTR 992
Query: 713 ASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYR 772
DR + FQ+G A IFL++ + GG+GL LT AD V++ DP WNP+ + Q++DRAYR
Sbjct: 993 --DRKTAIESFQDG-AAEIFLVSLKAGGVGLNLTAADTVVIFDPWWNPAVEEQAIDRAYR 1049
Query: 773 IGQKKDVVVYRLMTCGTVEEKI----YRKQIFKGGLF 805
IGQ K V VYRL+ GT+EEK+ RK+ GLF
Sbjct: 1050 IGQDKAVFVYRLVAAGTIEEKMDELKARKRALADGLF 1086
>gi|66805677|ref|XP_636560.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
gi|60464943|gb|EAL63058.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
Length = 1332
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 212/359 (59%), Gaps = 24/359 (6%)
Query: 559 SKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRA 616
++KN+ +VW +L Q +LY FL S+ V A + SPLAALT+LKKICDHP LL +
Sbjct: 717 TRKNDFVVWTKLADSQIELYRTFLESDEVKDALNKTQSPLAALTVLKKICDHPHLLREEM 776
Query: 617 AEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE 676
LD M +L+ + + I + N S K +L LL L +
Sbjct: 777 KMISLDEMKDLLSKVGGS-----SRSINSLV----------NNSGKFQLLLKLLPNLHQD 821
Query: 677 GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLT 735
GH VL+FSQ+ KML + + G +LRIDG+ ++ + + + D D++ F++T
Sbjct: 822 GHRVLMFSQSVKMLEDFEILLDHLGLTYLRIDGSISSTKKRQEIIDLYNTDMSYFAFIMT 881
Query: 736 SQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIY 795
QVG LGL LT ADRV+++DP+WN + DNQ+VDRAYRIGQKKDVVVYRLM+CGT+EEKIY
Sbjct: 882 IQVGALGLNLTSADRVLILDPSWN-TIDNQAVDRAYRIGQKKDVVVYRLMSCGTIEEKIY 940
Query: 796 RKQIFKGGLFKTATEHKE--QIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEEHGDQHNM 853
RKQ+FKG L KT + Q RYFS DLRE+ +L ++S+TQQQL H
Sbjct: 941 RKQVFKGSLMKTMLNNTMSGQHRYFSSNDLREMFTL--DDTNISVTQQQLETLHSKNRKT 998
Query: 854 DESLEAHIQFLDTLGIA-GVSHHSLLFSKTARVQVVQEEEEATRRKGTAFVGNSSSSYL 911
L+ H++FL LG+ GVS H LLFS+ +E+ E + N+S+S+L
Sbjct: 999 SPELDEHLKFLLGLGMVFGVSDHDLLFSEAVTTDHSKEDLERIKNGTYESKTNTSTSHL 1057
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 165/278 (59%), Gaps = 12/278 (4%)
Query: 282 EGSITLSGPRST----YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTM 337
E SI ++ +S + + KI + L+ +QR+G+ WLW+L C+ GGILGDDMGLGKTM
Sbjct: 367 EKSIYINSTKSKEGKYFKMKDKIYDGLYWYQRDGVNWLWNLFCRHAGGILGDDMGLGKTM 426
Query: 338 QICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQY 397
QIC FL + I L+V P L+ HW+KE +R + G R L+
Sbjct: 427 QICSFLNSMHSQGHISHTLLVMPVGLIEHWLKEFNRFNPKYLVRVFHGNNTIERNKSLKR 486
Query: 398 VLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKS 457
V+ + G+++TTY +V +N S+ E G IWDY+ILDEGH IK TQ +K+
Sbjct: 487 VMNEGGIIITTYGMVVSNVDSMI-------ENGRKSFIWDYVILDEGHKIKETKTQISKT 539
Query: 458 LLEIPSAHRIIISGTPIQNNLKELWALFNFCC-PELLGDNKWFKEKYELPILRGNDKHAL 516
+ + H+II++GT IQNNL+ELWALF++ C LLG + F + PI++ + +
Sbjct: 540 MHRFNAKHKIILTGTAIQNNLRELWALFDWVCGSTLLGSVRNFTANFSKPIIKAHTSDSS 599
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTS 554
+K GSA+A++LR I P+FLRR K +VF ++D S
Sbjct: 600 QDQKITGSAIAEDLRNIIAPHFLRREKKDVFKQNDQPS 637
>gi|357631781|gb|EHJ79250.1| steroid receptor-interacting snf2 domain protein [Danaus plexippus]
Length = 764
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/568 (29%), Positives = 288/568 (50%), Gaps = 84/568 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGK-----GGILGDDMGLGKTMQICGFLAGLFHS----- 349
+GN+L PHQREG+++++ + G I+ D+MGLGKT+Q L L
Sbjct: 130 LGNILRPHQREGVKFMYDCVTGAQIDNAYGCIMADEMGLGKTLQCITLLWTLLRQGPDCK 189
Query: 350 RLIKRALVVAPKTLLSHWIKEL----------------TAVGLSAKIREYFGTCVKTRQY 393
I +A++V P +L+ +W E+ + ++ K++++ T R
Sbjct: 190 PTICKAIIVCPSSLVKNWYNEIGKWLGQRINALPMDGGSKAEITLKLQQFMNTFAAIRVA 249
Query: 394 ELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQ 453
VL+ +Y+ R S L S E G ++ DEGH +KN Q
Sbjct: 250 T--------PVLIISYETFRIYSNILHAS-----EVG-------LVLCDEGHRLKNSENQ 289
Query: 454 RAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDK 513
++L+ + + RI+ISGTPIQN+L E ++L +F +LG + FK++YE PIL+G D
Sbjct: 290 TYQALMGLKAKRRILISGTPIQNDLTEYFSLVHFVNSGILGTAQDFKKRYENPILKGQDA 349
Query: 514 HALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSC 573
A +E++ + L + +RR + + + L K E ++ +++T
Sbjct: 350 LATPQERQKAQECLQTLTSIVNKCMIRRTSSLL--------TKYLPVKFEQVICVKMTPL 401
Query: 574 QRQLYEAFLNSEIVLSAFDG-------SPLAALTILKKICDHPLLLTKRA---AEDVLDG 623
Q QLY F+NS+ + + F G S L+++T+LKK+C+HP L+ + +E G
Sbjct: 402 QTQLYRNFINSDAIKNKFAGTGDKNTLSALSSITMLKKLCNHPDLVYDKIMERSEGFEKG 461
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIF 683
D + + D I DV + ++ + + C ++ + + D +++
Sbjct: 462 KDLLPSNYD----------IKDV--RPEYSGKLMILDCILANLKTNTD------DKIVLV 503
Query: 684 SQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLG 742
S + L+L ++ + Y+++R+DG+ R K+V F + IF+L+S+ GG G
Sbjct: 504 SNYTQTLDLFEKLCRKRCYQYVRLDGSMTIKKRAKVVESFNSKESKEWIFMLSSKAGGCG 563
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
L L A+R+I+ DP WNP+ D+Q++ R +R GQKK +YRL+ GT+EEKI+++Q K
Sbjct: 564 LNLIGANRLIMFDPDWNPANDDQAMARVWRDGQKKPCYIYRLLATGTIEEKIFQRQAHKK 623
Query: 803 GLFKTATEHKE-QIRYFSQQDLRELLSL 829
L T + E +R+F+ DL++L L
Sbjct: 624 ALSDTVVDQNEDSMRHFTSDDLKDLFRL 651
>gi|7384851|dbj|BAA93079.1| Rad54 homolog [Neurospora crassa]
Length = 834
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 180/569 (31%), Positives = 286/569 (50%), Gaps = 69/569 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGF 342
PR ++ ++ +L PHQ EG+R+++ C + G I+ D+MGLGKT+Q
Sbjct: 211 PRVPVVIDPRLAKVLRPHQIEGVRFMY--RCVTGMIDEKANGCIMADEMGLGKTLQCITL 268
Query: 343 LAGLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
L L I++A+V P +L+ +W EL L A F K + EL
Sbjct: 269 LWTLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVK-WLGADAITPFAIDGKASKEELT 327
Query: 397 YVLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHL 446
L+ + V++ +Y+ +R N L+G+ M+ DEGH
Sbjct: 328 RQLRQWAIASGRSVTRPVIIVSYETLRLNVDELKGTPI------------GLMLCDEGHR 375
Query: 447 IKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP 506
+KN +Q +L + + R+I+SGTPIQN+L E +AL P+LLG F++++E+P
Sbjct: 376 LKNGDSQTFSALNSLNVSRRVILSGTPIQNDLSEYFALITVANPDLLGTRLEFRKRFEIP 435
Query: 507 ILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV 566
ILRG A + E++ G EL + + +RR N++ S L K E +V
Sbjct: 436 ILRGRHADASEAERKRGDECLVELLAIVNKFIIRR-TNDIL-------SKYLPVKYEHVV 487
Query: 567 WLRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDG 623
+ L Q LY F+ S + + G PL A+ ILKK+C+HP LL A L G
Sbjct: 488 FCNLAPFQLDLYNYFVASPDIQALLRGKGSQPLKAINILKKLCNHPDLLDLSAD---LPG 544
Query: 624 MDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLI 682
+ PED ++ A D ++ S K+ + +L ++ + ++ +++
Sbjct: 545 CEQYW-PED---------YVPKEARGRD-RDVKPWYSGKMQVLDRMLARIRADTNDKIVL 593
Query: 683 FSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQVGG 740
S + L+L + ++ Y LR+DGT + R K+V+ F EGD +FLL+S+ GG
Sbjct: 594 ISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFNDPEGDEF-VFLLSSKAGG 652
Query: 741 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIF 800
GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 653 CGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSH 712
Query: 801 KGGLFKTATEHKEQI-RYFSQQDLRELLS 828
K L + E + R+FS D REL +
Sbjct: 713 KQSLSSCVVDSAEDVERHFS-LDSRELFT 740
>gi|171686770|ref|XP_001908326.1| hypothetical protein [Podospora anserina S mat+]
gi|170943346|emb|CAP68999.1| unnamed protein product [Podospora anserina S mat+]
Length = 1395
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 275/520 (52%), Gaps = 73/520 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 560 VGGKLKEYQIKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIEKKHQNGPYLVI 619
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
P + L++W E S Y G TR+ + + + + + VLLTTY+ +
Sbjct: 620 VPLSTLTNWNLEFDKWAPSVSKIVYKGPP-NTRKLQQEKIRRGEFQVLLTTYEYI----- 673
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH-RIIISGTPIQN 476
I D W +MI+DEGH +KN +++ + ++ + S R+I++GTP+QN
Sbjct: 674 -------IKDRPLLSKIKWFHMIIDEGHRMKNSNSKLSATIQQYYSTRFRLILTGTPLQN 726
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERI 534
NL ELWA+ NF P + K F + + P G DK L E++I V + L + +
Sbjct: 727 NLAELWAMLNFVLPNIFKSAKTFDDWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVL 784
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDG 593
+P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + + +I++S G
Sbjct: 785 RPFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQARLYKQMVTHQKILVSDGKG 836
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
A + L+K+C+HP V D +++ +NP M +++
Sbjct: 837 GKTGARGLSNMIMQLRKLCNHPF---------VFDEVENQMNP----------MSVSN-- 875
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
++ + + LLD+++P+ GH VL+F Q +++++++ + +G +
Sbjct: 876 ----------DLLWRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDFLRFRGIQ 925
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+LR+DGTTK+ DR ++ DF D +P +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 926 YLRLDGTTKSEDRSDLLRDFNRPD-SPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPH 984
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 985 QDLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARFK 1024
>gi|115438775|ref|NP_001043667.1| Os01g0636700 [Oryza sativa Japonica Group]
gi|55297587|dbj|BAD68933.1| DNA repair helicase ERCC6-like [Oryza sativa Japonica Group]
gi|113533198|dbj|BAF05581.1| Os01g0636700 [Oryza sativa Japonica Group]
Length = 469
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 172/282 (60%), Gaps = 10/282 (3%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQ-GKGGILGDDMGLGKTMQICGFLAGLFHSRLI 352
++LP +I + LFPHQ++GL WLW LHC+ GGIL DDMGLGKT Q FLAGLF+S L
Sbjct: 196 FLLPSEIFSSLFPHQKDGLEWLWRLHCEKSGGGILADDMGLGKTRQASAFLAGLFYSDLT 255
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIV 412
+R L+VAP T+L WI ELT VG + + F C KTR L VL++ GVLL TYD+V
Sbjct: 256 QRVLIVAPGTILHQWIAELTKVGFNEDLIHSFW-CAKTRHDSLAQVLKEGGVLLITYDLV 314
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGT 472
R ++ L G S S + WDY+ILDEGH++KNP+T+ A +L + ++++GT
Sbjct: 315 RLYNEELNGMSSKSSKMRRACPSWDYVILDEGHVLKNPNTKNAAALKSLSRGQTVVLTGT 374
Query: 473 PIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
P+QNNL E +L + CCP +LG F+ + PI GN A I S A E R+
Sbjct: 375 PVQNNLSEFHSLMSLCCPTVLGSLAAFERDFCKPIDMGNVLEATTEVVMISSKKAMEFRK 434
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQ 574
++PYFLRR K + + L K ++++WL+LT Q
Sbjct: 435 MVRPYFLRRTKESI--------ESLLPNKADLVIWLKLTPYQ 468
>gi|346971605|gb|EGY15057.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Verticillium dahliae VdLs.17]
Length = 1426
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 273/519 (52%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L +L LV+
Sbjct: 531 VGGKLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIERKLQDGPYLVI 590
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + + VLLTTY+ +
Sbjct: 591 VPLSTLTNWTLEFEKWAPSVTKIVYKGPPNARKQQQDKIRQGRFQVLLTTYEYI------ 644
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN +++ ++ + + R+I++GTP+QNN
Sbjct: 645 ------IKDRPILSKIKWFHMIIDEGHRMKNQNSKLTATIQQYYHTRFRLILTGTPLQNN 698
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWA+ NF P + K F E + P G DK L E++I V + L + ++
Sbjct: 699 LTELWAMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMDLTEEEQI--LVIRRLHKVLR 756
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + +++IV+S G
Sbjct: 757 PFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQTKLYKQMVTHNKIVVSDGQGG 808
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
A + L+K+C+HP V +++++NP ++I+D
Sbjct: 809 KTGARGLSNMIMQLRKLCNHPF---------VFGEVENVMNP----------LNISD--- 846
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
D + + + LLD+++P+ GH VL+F Q +++++++ + + +++
Sbjct: 847 --------DKL-WRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDYLRYRNFQY 897
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+R+DGTTK+ +R ++ DF D +P +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 898 MRLDGTTKSDERSDLLKDFNAPD-SPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 956
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 957 DLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFK 995
>gi|134117101|ref|XP_772777.1| hypothetical protein CNBK1510 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255395|gb|EAL18130.1| hypothetical protein CNBK1510 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1409
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 262/506 (51%), Gaps = 62/506 (12%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVA 359
G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 542 GGTLKDYQVKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLIEKKKQPGPFLVIV 601
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
P + L++W E + + G+ R+ + D V LTTY+ + L
Sbjct: 602 PLSTLTNWTMEFERWAPAVRTLILKGSPAVRREAYPRLRAIDFQVCLTTYEYIIKERPLL 661
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPIQNNL 478
S I W +MI+DEGH +KN ++ +++L E S+ +R+I++GTP+QNNL
Sbjct: 662 ---SRIK---------WIHMIIDEGHRMKNVKSKLSQTLNEYYSSRYRLILTGTPLQNNL 709
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILR-GNDKHALDREKRIGSAVAKELRERIQPY 537
ELWAL NF P++ K F E + P G +K ++ E+ + V K L + ++P+
Sbjct: 710 PELWALLNFVLPKIFNSVKSFDEWFNAPFANTGGEKMEMNEEEAL--LVVKRLHKVLRPF 767
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD-GSPL 596
LRRLK +V E L K E +++ ++++ Q +LYE+ + + + P
Sbjct: 768 LLRRLKKDVESE--------LPDKVEKVIYTKMSALQWKLYESVQKYKTLPTDMSVAKPQ 819
Query: 597 A------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
AL L+KIC+HP + + ED G N D
Sbjct: 820 KRQNLQNALMQLRKICNHPYVF-REVDEDFTVG-----NTTD------------------ 855
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
EQ ++ K + +L KL GH VLIF Q +++ ++ + +G+K+ R+DG+
Sbjct: 856 ---EQIIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDFRGWKYCRLDGS 912
Query: 711 TKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
TKA DR +++ F + + +P +F+L+++ GGLGL L AD VI+ D WNP D Q+ D
Sbjct: 913 TKAEDRQTLLSTFNDPN-SPYQVFILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQD 971
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKI 794
RA+RIGQKK+V V RL++ GTVEE +
Sbjct: 972 RAHRIGQKKEVRVLRLISSGTVEELV 997
>gi|307727814|ref|YP_003911027.1| SNF2-related protein [Burkholderia sp. CCGE1003]
gi|307588339|gb|ADN61736.1| SNF2-related protein [Burkholderia sp. CCGE1003]
Length = 1227
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 179/564 (31%), Positives = 278/564 (49%), Gaps = 95/564 (16%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKR 354
+P + L +Q++GL W+ L QG G+L DDMGLGKT+Q + LA RL K
Sbjct: 670 VPAALRAQLRAYQQQGLNWMQYLREQGLAGVLADDMGLGKTVQTLAHILAEREAGRLDKP 729
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
AL+V P TL+ +W +E K+ G K R ++ + ++LTTY ++
Sbjct: 730 ALIVVPTTLVHNWREEARRFAPELKVLVLNGPQRKERFEQIG----EHELILTTYALLWR 785
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+ K L G + +ILDE +KN +T+ A+++ + + HR+ ++GTP+
Sbjct: 786 DQKVLAGHEY------------HLLILDEAQYVKNATTKAAQAIRGLSARHRLCLTGTPL 833
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGND--KHALDREKRIGSAVAKELRE 532
+N+L ELW+ F+F P LG K F ++ PI + +D + +L L
Sbjct: 834 ENHLGELWSQFDFLLPGFLGTQKDFTRRWRNPIEKNHDGVRRSL-------------LAR 880
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--EIVLSA 590
RI+P+ LRR K+EV E L K ++ + L QR LYE + E V +A
Sbjct: 881 RIRPFMLRRRKDEVAKE--------LPAKTTIVCSVDLEGAQRDLYETVRTAMQERVRAA 932
Query: 591 FDGSPLA--------ALTILKKICDHPLLL--------------TKRAAEDVLDGMDSML 628
LA AL L+++C P L+ D G ++
Sbjct: 933 VSAQGLARSHIIVLDALLKLRQVCCDPRLVRSLRAAEAEAEAQGQAGVHADTHAGAQALA 992
Query: 629 NPEDA-ALAEKLAMHIADV-----AEKDDFQEQHDNI----------------------S 660
++A A A+ A+V A + + + H++ S
Sbjct: 993 QADEADANAQADVQAQANVQAHAHANSNSYDKTHEDSPRKLSRVSDKSEKPEKGARPTRS 1052
Query: 661 CKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIV 720
K+ +LS+L +LI EG VL+FSQ ML+LI +++ ++ + G T +DR+ V
Sbjct: 1053 AKLDLLLSMLPELIEEGRRVLLFSQFTGMLSLIAQALDEAAIAYVILTGDT--ADRITPV 1110
Query: 721 NDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVV 780
FQ+G+V P+FL++ + GG+GL LT AD VI DP WNP+ +NQ+ DRA+R+GQ K V
Sbjct: 1111 QRFQQGEV-PLFLISLKAGGVGLNLTAADTVIHYDPWWNPAAENQATDRAHRLGQDKPVF 1169
Query: 781 VYRLMTCGTVEEKIYRKQIFKGGL 804
VY+L+ G++EEKI Q K GL
Sbjct: 1170 VYKLIAAGSIEEKIVELQEQKAGL 1193
>gi|242790191|ref|XP_002481516.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC
10500]
gi|218718104|gb|EED17524.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC
10500]
Length = 808
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 172/572 (30%), Positives = 281/572 (49%), Gaps = 72/572 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++L+ G I+ D+MGLGKT+Q +
Sbjct: 201 PKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGMIDENANGCIMADEMGLGKTLQCISLMW 260
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTA-VGLSAKIREYFGTCVKTRQYELQY 397
L +++ ++ P TL+ +W EL +G A I F K + EL
Sbjct: 261 TLLKQSPEAGKTTVQKCVIACPSTLVRNWANELVKWLGPDAVIP--FVIDGKATKAELSS 318
Query: 398 VLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLI 447
L+ + VL+ +Y+ +R N + LR D ++ DEGH +
Sbjct: 319 QLKQWAIASGRAIVRPVLIVSYETLRLNIEDLR------------DTPIGLLLCDEGHRL 366
Query: 448 KNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPI 507
KN + K L + + R+I+SGTPIQN+L E +AL +F P LLG F++++E+PI
Sbjct: 367 KNKESLTWKELNSLNVSRRVILSGTPIQNDLSEYFALVHFANPNLLGSQNEFRKRFEIPI 426
Query: 508 LRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVW 567
LRG D A D +++ G EL + + +RR N++ S L K E +V+
Sbjct: 427 LRGRDAAASDEDRKKGDERLAELSTIVNKFIIRR-TNDIL-------SKYLPIKYEHVVF 478
Query: 568 LRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGM 624
L+ Q LY FL S + S G PL A+ +LKK+C+HP D+LD
Sbjct: 479 CNLSEFQLNLYNYFLQSPEIRSLLRGKGSQPLKAIGLLKKLCNHP---------DLLDLS 529
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHN 679
+ E + D D + + +I S + +LD+++
Sbjct: 530 RDLPGCE---------QYFPDDYVPPDGRGRDRDIKSWYSGKMMVLDRMLARIRQDTNDK 580
Query: 680 VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQV 738
+++ S + L+L ++ ++ Y LR+DGT + R K+V+ F + + +FLL+S+
Sbjct: 581 IVLISNYTQTLDLFEKLCRARAYGCLRLDGTMNVNKRQKLVDKFNDPNGEEFVFLLSSKA 640
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++Q
Sbjct: 641 GGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQ 700
Query: 799 IFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
K L + E + R+FS LREL
Sbjct: 701 SHKQSLSSCVVDSAEDVERHFSLDSLRELFQF 732
>gi|357470689|ref|XP_003605629.1| TATA-binding protein-associated factor [Medicago truncatula]
gi|355506684|gb|AES87826.1| TATA-binding protein-associated factor [Medicago truncatula]
Length = 1477
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 280/552 (50%), Gaps = 80/552 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
Y L ++ L +Q+EG+ WL L GIL DDMGLGKT+Q +A S +++
Sbjct: 872 YKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVA----SEIVE 927
Query: 354 R-----------ALVVAPKTLLSHW---IKELTAVGLSAKIREYFGTCVKTRQYELQYVL 399
R +L++ P TL+ HW I++ V + + + +Y G+ + L+
Sbjct: 928 RRTQIGNEDLLPSLIICPSTLVGHWAFEIEKFIDVSVISSL-QYVGS--AQDRMLLRDSF 984
Query: 400 QDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLL 459
V++T+YD+VR + L W+Y ILDEGH+IKN ++ ++
Sbjct: 985 CKHNVIITSYDVVRKDIDYL------------GQLPWNYCILDEGHIIKNAKSKVTLAVK 1032
Query: 460 EIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDRE 519
++ + HR+I+SGTPIQNN+ +LW+LF+F P LG ++ F+ Y P+L D ++
Sbjct: 1033 QLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTDRQFQSTYGKPLLASRDPKCSAKD 1092
Query: 520 KRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQ 576
G+ + L +++ P+ LRR K+EV LS E I+ + L++ Q +
Sbjct: 1093 AEAGALAMEALHKQVMPFLLRRTKDEV-----------LSDLPEKIIQDRYCDLSTVQLK 1141
Query: 577 LYEAFLN-------SEIVLS----AFDGS---------PLAALTILKKICDHPLLLTKRA 616
LYE F S IV + A +GS AL L K+C HPLL+
Sbjct: 1142 LYEQFSGSRAKQEVSSIVTTNESAAGEGSGSSTKASSHVFQALQYLLKLCSHPLLVLGGK 1201
Query: 617 AEDVLDGMDSMLNPEDA-ALAEKLAMHIAD--VAEKDDFQEQHDNISCKISFILSLLDKL 673
D L + L P + ++E +H + VA + +E C I S +
Sbjct: 1202 IPDSLSTILLELFPAGSDVISELHKLHHSPKLVALHEILEE------CGIGVDASSTENA 1255
Query: 674 IPEG-HNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVA 729
+ G H VLIF+Q + L++I++ + K +LR+DG+ + R +IV F
Sbjct: 1256 VGIGQHRVLIFAQHKAFLDIIEKDLFQTHMKSVTYLRLDGSVETEKRFEIVKAFNSDPTI 1315
Query: 730 PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGT 789
+ LLT+ VGGLGL LT AD ++ V+ WNP D Q++DRA+R+GQKK V V+RL+ GT
Sbjct: 1316 DVLLLTTHVGGLGLNLTSADTLVFVEHDWNPMRDLQAMDRAHRLGQKKVVNVHRLIMRGT 1375
Query: 790 VEEKIYRKQIFK 801
+EEK+ Q FK
Sbjct: 1376 LEEKVMSLQRFK 1387
>gi|88809531|ref|ZP_01125039.1| hypothetical protein WH7805_10274 [Synechococcus sp. WH 7805]
gi|88786750|gb|EAR17909.1| hypothetical protein WH7805_10274 [Synechococcus sp. WH 7805]
Length = 1070
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 177/550 (32%), Positives = 285/550 (51%), Gaps = 82/550 (14%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR-A 355
P L P+Q GL WL LH +G L DDMGLGKT+Q+ FL L + +KR
Sbjct: 578 PEGFCGQLRPYQERGLGWLAFLHRFDQGACLADDMGLGKTIQLLAFLQHLKMEQELKRPV 637
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
L+VAP ++L++W +E A + E++G + L+ L+D ++LT+Y +++ +
Sbjct: 638 LLVAPTSVLTNWKREAAAFTPELTVHEHYGPKRPSTPAALKKALKDVDLVLTSYGLLQRD 697
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP-----SAHRIIIS 470
S+ L E+ D W ++DE IKNPS +++++ ++ S RI ++
Sbjct: 698 SELL--------ESFD----WQGTVIDEAQAIKNPSAKQSQAARDLARTRKGSRFRIALT 745
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N + ELWAL +F P +LG+ ++F+++Y +PI R D +L ++L
Sbjct: 746 GTPVENRVSELWALMDFLNPNVLGEEEFFRQRYRMPIERYGDMSSL-----------RDL 794
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
+ R+ P+ LRRLK D + L +K E+ W+ L+ Q+ LY + E L A
Sbjct: 795 KSRVGPFILRRLKT------DKAIISDLPEKVELSEWVGLSKEQKSLYAKTV--ENTLDA 846
Query: 591 FDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMH 642
+P L LT LK+IC+HP L AL E++A
Sbjct: 847 IARAPRGKRHGQVLGLLTRLKQICNHPAL----------------------ALKEEVA-- 882
Query: 643 IADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGY 702
DDF ++ S K+ + +L+++I G L+F+Q + +L+Q + +
Sbjct: 883 ------GDDFLQR----SVKLQRLEEILEEVIAAGDRALLFTQFAEWGHLLQGYLQRRWR 932
Query: 703 KFLR-IDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
+ + G+T +R +V+ FQE P +FLL+ + GG+GL LT+A V +D WNP
Sbjct: 933 SEVPFLSGSTSKGERQAMVDRFQEDPRGPQLFLLSLKAGGVGLNLTRASHVFHIDRWWNP 992
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFK-TATEHKEQIRYFS 819
+ +NQ+ DRAYRIGQ V+V++ +T G+VEEKI R K L + +E + F
Sbjct: 993 AVENQATDRAYRIGQTNRVMVHKFITSGSVEEKIDRMIREKSRLAEDIVGSGEEWLGGFD 1052
Query: 820 QQDLRELLSL 829
L+EL+SL
Sbjct: 1053 MGQLKELVSL 1062
>gi|449018707|dbj|BAM82109.1| chromodomain helicase DNA binding protein CHD [Cyanidioschyzon
merolae strain 10D]
Length = 2014
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 267/532 (50%), Gaps = 92/532 (17%)
Query: 299 KIGNMLFPHQREGLRWLWSLHCQGK--GGILGDDMGLGKTMQICGFLAGLFHSRLIKRA- 355
K G L +Q EGL WL +HC K G IL D+MGLGKT+Q FL L+ + ++
Sbjct: 356 KNGGELREYQLEGLNWL--VHCWFKRQGSILADEMGLGKTIQAVSFLDYLYREQHLRGPF 413
Query: 356 LVVAPKTLLSHWIKEL-TAVGLSAKIREYFGTCVKTRQYELQYVLQDKG----------- 403
LVVAP + L HW +E T ++A + F V+ R LQY G
Sbjct: 414 LVVAPLSTLGHWKREFETWTHMNAIV---FHGNVRARDVILQYEWTYAGMSVRSGLFKWH 470
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
VL+TTY+I+ + LRG W +++DE H +KN ++ LL S
Sbjct: 471 VLITTYEIILQEANRLRGIP------------WAVIVVDEAHRLKNRQSKLFDELLGFRS 518
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
HR++++GTP+QNN EL++L +F P + K F++ Y G+ + A
Sbjct: 519 EHRVLLTGTPLQNNSLELFSLLHFLEPAKFPNEKEFQQAY------GDIRDA-------- 564
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN 583
+ L+ ++PY LRR+K +V + K E ++ + LT Q+Q Y A
Sbjct: 565 -EAVENLKALLRPYLLRRMKEDV--------EKAIPPKEETLISVELTRIQKQWYRALYE 615
Query: 584 SEIVLSAFDG-----SPLAALTI-LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAE 637
G L + + L+K C+HP L+ G++ + AAL E
Sbjct: 616 QNFAFLEQGGKRNNVGNLRNIVMELRKCCNHPYLIR---------GVEEIETQSLAALGE 666
Query: 638 KLAM-HIADVAEKDDFQEQHDNISCKISFILSLLDKLIP----EGHNVLIFSQTRKMLNL 692
M H+ + + K L L+DKL+P +GH VLIFSQ ++L++
Sbjct: 667 DALMRHLVEASGK-----------------LVLVDKLLPVLREKGHRVLIFSQMIRVLDI 709
Query: 693 IQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVI 752
+++ + +GYKF R+DG + +DR + ++ FQ+ +FLL ++ GG G+ LT AD VI
Sbjct: 710 LEDYLHWRGYKFERLDGRVRGNDRQQSIDRFQKDPENFVFLLCTRAGGQGINLTVADTVI 769
Query: 753 VVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
+ D WNP D Q+ R +RIGQ++DV VYRL+T GT EE+++ + K GL
Sbjct: 770 IFDSDWNPQNDVQAQARCHRIGQERDVKVYRLITRGTYEEEMFDRASKKLGL 821
>gi|225560239|gb|EEH08521.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 974
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 284/561 (50%), Gaps = 58/561 (10%)
Query: 307 HQREGLRWLWSL-----HCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-------LIKR 354
HQREG+++L+ G+G IL D+MGLGKT+Q + L ++K+
Sbjct: 319 HQREGVKFLYECVMGMRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYEAQPVVKK 378
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
AL+V P TL+ +W KE + ++ + +TR + + + V++ Y+ +R
Sbjct: 379 ALIVCPVTLIDNWKKEFRKWLGNERVGVFVADAKRTRLTDFT-MGKSYSVMIIGYERLRT 437
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+ L S I D +I DEGH ++ + A+++ + ++ RI++SGTPI
Sbjct: 438 VQEELSKGSGI-----------DIVIADEGHRMRTVQNKSAQAIQSLNTSKRIVLSGTPI 486
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
QN+L E +A+ +F P LLG K F +++E PI++ AL+++ G A ++EL
Sbjct: 487 QNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIEKGEARSEELTNLT 546
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS 594
+ LRR + + L K E +++ TS Q+ +Y L+S I A S
Sbjct: 547 SLFILRRTADILLK--------YLPPKTEYVLFCNPTSSQKNIYHYVLSSPIFQCALGNS 598
Query: 595 --PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
L +TILKK+C+ P LL R ++ +S L ++L + H++ +
Sbjct: 599 ESALQLITILKKLCNSPSLLKPRNSDQT---PNSTLGALISSLPPTVLRHLSPAS----- 650
Query: 653 QEQHDNISCKISFILSLLDKLI-PEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTT 711
S KI + LL + V++ S L+L+ + S FLR+DG+T
Sbjct: 651 -------SGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRLDGST 703
Query: 712 KASDRVKIVNDFQEGDVAPIF--LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDR 769
S R +V+DF + +F LL+++ GG GL L A R+I+ D WNP+TD Q++ R
Sbjct: 704 PPSKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNLIGASRLILFDVDWNPATDIQAMAR 763
Query: 770 AYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
+R GQK+ VYRL+ G +EEKI+++Q+ K GL + + K + FS+++LR+L L
Sbjct: 764 IHRDGQKRHCRVYRLVLKGALEEKIWQRQVTKIGLADSVMDQKTGVSQFSREELRDLFRL 823
Query: 830 PKQGFDVSLTQQQLHEEHGDQ 850
+G T Q HE G Q
Sbjct: 824 -DEG-----TTCQTHELIGCQ 838
>gi|308497648|ref|XP_003111011.1| hypothetical protein CRE_04804 [Caenorhabditis remanei]
gi|308242891|gb|EFO86843.1| hypothetical protein CRE_04804 [Caenorhabditis remanei]
Length = 966
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 292/559 (52%), Gaps = 65/559 (11%)
Query: 266 LVNVLDDYSD--DSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGK 323
L +LDD D +V +D T GP +L K G L +Q G++WL ++ +
Sbjct: 356 LSRILDDCKDHAKTVAKDFERCT-EGPLELPLL--KEGCTLHDYQLVGVKWLIMMNNKEL 412
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREY 383
ILGD+MGLGKT+QI FL+ L L+V P + + +WI E S K+ Y
Sbjct: 413 NAILGDEMGLGKTIQIVAFLSYLKQIGKTGPHLIVVPSSTIENWIGEFHKWCPSLKLLTY 472
Query: 384 FGTCVKTRQYELQYVLQDKG---VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
+GT R++ V + K V+LTTY++V + S D+ + +Y+I
Sbjct: 473 YGT-QDERKHLRHRVKKQKDNIDVILTTYNMVTSKS---------DDKKFFKNFSLNYVI 522
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
DEGH++KN + R K L+++ +I+++GTP+QNNL EL +L F ++ NK+ +
Sbjct: 523 YDEGHMLKNCDSDRYKGLMKVKGKRKILLTGTPLQNNLIELISLMYFVLFKVF--NKYCE 580
Query: 501 EKYEL--------PILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDV 552
+ L P L DK AL ++ RI +E + +QPY LRRLKN+V
Sbjct: 581 DITHLLQHFKQLGPALESKDK-ALYQQDRI-----EEAKSILQPYILRRLKNQVL----- 629
Query: 553 TSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD--GSPLAALTILKKICDHPL 610
++L K+E I+ + + Q+QLY+ +N VL + G +L L++ +HPL
Sbjct: 630 ---SSLPTKSEQIIEVEMKKPQKQLYDDIVN---VLQRPEEAGDSYGSLMRLRQAANHPL 683
Query: 611 LLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA-DVAEKDDFQEQH--DNISCKISFIL 667
L + LD + +L + A A+K H++ D+A D + + C F+L
Sbjct: 684 LRRSEYTDAKLDKIAKLLCLREKAYADKKWQHVSEDLAWLSDIKIHQLCEKFRCTSKFLL 743
Query: 668 S-----------LLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
+ LDK++PE G VLIFSQ ML++++ + +GY + R+DG T
Sbjct: 744 NEELALKSGKCEQLDKMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTP 803
Query: 713 ASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYR 772
DR +++N+F +FLL+++ GGLG+ LT A+ +I+ D +NP D Q+ DR +R
Sbjct: 804 VLDRQEMINEFNISKDLFVFLLSTKAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHR 863
Query: 773 IGQKKDVVVYRLMTCGTVE 791
+GQ+K V V RL++ TVE
Sbjct: 864 MGQEKSVHVTRLVSKCTVE 882
>gi|320168818|gb|EFW45717.1| Rad54b protein [Capsaspora owczarzaki ATCC 30864]
Length = 988
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 177/562 (31%), Positives = 279/562 (49%), Gaps = 76/562 (13%)
Query: 304 LFPHQREGLRWLWSLHC-------QGKGGILGDDMGLGKTMQICGFLAGLFH------SR 350
L PHQR+G+R+L+ C G G IL D+MGLGKT+Q L L +
Sbjct: 319 LRPHQRDGVRFLY--ECVTGMRTDAGFGAILADEMGLGKTLQCVTLLWTLLKQGPYMGTA 376
Query: 351 LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTR--QYELQYVLQDKGVLLTT 408
L+KRALVV P +L+ +W +E L + F + R + LQ V+ V++ +
Sbjct: 377 LVKRALVVCPSSLVKNWQREFKK-WLGDHRLQTFAVSAENRPDAFLLQTVIP---VMIVS 432
Query: 409 YDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRII 468
Y+++R + F D + DEGH +KN S + +++L+ + + RII
Sbjct: 433 YEMLRQEIDVISKVPF------------DIVFCDEGHRLKNESAKISQALMSLSTRRRII 480
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
++GTPIQN+L+E ++L FC P ++G FK YE PI+ A EK +G A
Sbjct: 481 LTGTPIQNDLQEFFSLLEFCNPGIVGTATTFKRIYENPIVASRQPEATQDEKLLGQQRAS 540
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
+L++ + LRR + + L K E +V+ + Q +Y L S +
Sbjct: 541 QLQQLTSLFCLRRTSD--------VNRQYLPPKIEYVVFCEPSPLQLAIYRKVLQSAPLR 592
Query: 589 SAFDGSP-----LAALTILKKICDHPLL---LTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
S FD S L A+T LKKIC+ P L L K A +D L L P+D +
Sbjct: 593 SCFDSSSRASQHLVAITSLKKICNSPALIHELAKNAEKDSLFANTIDLFPDDFS------ 646
Query: 641 MHIADVAEKDDFQEQHDN---------ISCKISFILSLLDKLIPEGHN-VLIFSQTRKML 690
D F H + CK++ + +L + + + V+I S + L
Sbjct: 647 --------PDTFDAAHSGKQRIFWMWALRCKMAALAQILCTIKRDTTDRVVIVSNYTQTL 698
Query: 691 NLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEG-DVAPIFLLTSQVGGLGLTLTKAD 749
+ +++ + + F R+DG+T + R IV F +FLL+S+ GG+GL L A
Sbjct: 699 DHLEKLCAAYEFSFARLDGSTPTAKRQPIVEAFNSKYSTDYVFLLSSKAGGVGLNLVGAC 758
Query: 750 RVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL--FKT 807
R+I+VD WNP+ D Q++ R +R GQ + V +YR++ G+++EKIY++Q+ K GL +
Sbjct: 759 RLILVDTDWNPANDLQAMARVWRDGQTRTVHLYRMLLTGSIDEKIYQRQLSKQGLSVAVS 818
Query: 808 ATEHKEQIRYFSQQDLRELLSL 829
+ E + FSQ +LR+L SL
Sbjct: 819 SNEGEASAVSFSQDELRDLFSL 840
>gi|225684006|gb|EEH22290.1| DNA repair and recombination protein RAD54 [Paracoccidioides
brasiliensis Pb03]
Length = 821
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++L+ + + G I+ D+MGLGKT+Q L
Sbjct: 214 PRIPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTLQCITLLW 273
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++ ++ P TL+ +W EL L F K + EL
Sbjct: 274 TLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVK-WLGKDAVTPFVVDGKATKAELTSQ 332
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + VL+ +Y+ +R N ++ D ++ DEGH +K
Sbjct: 333 LRQWAISSGRAVVRPVLIVSYETLRLNVDEIK------------DTQIGLLLCDEGHRLK 380
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + R+I+SGTPIQN+L E ++L NF P +LG F +K+E+PIL
Sbjct: 381 NGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKFEMPIL 440
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D D +++ G EL + + +RR N++ S L K E +V+
Sbjct: 441 RGRDADGTDEDRKKGDETVAELLAIVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 492
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + S G PL A+ ILKK+C+HP LL A L G +
Sbjct: 493 GLAPFQTDLYNYFIQSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLLNLGAD---LPGCE 549
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
P+D + I D + + S K+ + +L ++ + ++ +++ S
Sbjct: 550 QFF-PDD-------YIPIESRGRDRDVRSWY---SGKMMVLDRMLARIRQDTNDKIVLIS 598
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQVGGLG 742
+ L+L + S+ Y LR+DG+ + R K+V+ F EG+ +FLL+S+ GG G
Sbjct: 599 NYTQTLDLFERLCRSRQYGCLRLDGSMNVTKRQKLVDKFNDPEGEEF-VFLLSSKAGGCG 657
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K
Sbjct: 658 INLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQ 717
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELLSL 829
L + E + R+FS LREL
Sbjct: 718 SLSSCVVDSAEDVERHFSLDSLRELFQF 745
>gi|156379220|ref|XP_001631356.1| predicted protein [Nematostella vectensis]
gi|156218395|gb|EDO39293.1| predicted protein [Nematostella vectensis]
Length = 836
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/552 (30%), Positives = 283/552 (51%), Gaps = 58/552 (10%)
Query: 300 IGNMLFPHQREGLRWLWSL-----HCQGKGGILGDDMGLGKTMQICGFLAGLFHSR---- 350
+G L PHQR+G+ +L+ + G G IL D+MGLGKT+Q C L H +
Sbjct: 221 LGQHLRPHQRDGVLFLYECVMGLRNFNGNGAILADEMGLGKTLQ-CIALIWTLHKQGPYG 279
Query: 351 ---LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTC-VKTRQYELQYVLQDKGVLL 406
+ R L++ P +L+ +W E + ++R + T ++ +++ + + VL+
Sbjct: 280 GQPVCNRILIITPGSLVKNWCAEFRKWLGNERMRVFPVTSDMRVKEFIISPIYP---VLI 336
Query: 407 TTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHR 466
+Y++ FI + + +D I DE H +KN + + + + + R
Sbjct: 337 ISYEM------------FIRSQDDIMNIKFDLFICDEAHRLKNSAIKTTTLISGLKTRRR 384
Query: 467 IIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAV 526
++++GTPIQN+LKE L C P +LG F+ YE PI+ G A +K +G
Sbjct: 385 VLLTGTPIQNDLKEFHTLIELCNPGVLGT--LFRRVYEQPIVNGQQPGATSEDKLLGQTR 442
Query: 527 AKELRERIQPYFLRRLK--NEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS 584
A EL + +FLRR NE + L K EM+V+ R Q LY L S
Sbjct: 443 ASELNRLTRLFFLRRTSEINEKY----------LPPKVEMVVFCRPAHLQVTLYRHLLTS 492
Query: 585 EIVLSAFDGSP-----LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKL 639
+ S L + LKK+C+HP LL + G +++ + + +L + L
Sbjct: 493 RFLRGCLRASCPSSTHLECIGALKKLCNHPTLLYSAS-----QGANTLGDEDQVSLYDGL 547
Query: 640 AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGS 699
+ E +D E S K++ + S+L+++ G V++ S + L+++Q+
Sbjct: 548 ---LKLFPECNDASELSIAQSGKLTVLNSMLEEIHCTGERVVLVSNYSQTLDILQKLCTV 604
Query: 700 KGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAW 758
K Y++LR+DG+T + R +V F +FLL+S+ GG+GL L A R+I+ D W
Sbjct: 605 KKYRYLRLDGSTPTAKRQSLVERFNAKHCQDFVFLLSSKAGGVGLNLIGASRLILYDIDW 664
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRY- 817
NP+ D Q++ R +R GQ++ VV+YRL+T GT+EEKIY++Q K GL + ++Q++
Sbjct: 665 NPANDLQAMARVWRDGQRRRVVIYRLLTTGTIEEKIYQRQTTKQGLSGAVADDRKQVKVD 724
Query: 818 FSQQDLRELLSL 829
FSQ+D+++L +L
Sbjct: 725 FSQEDVKDLFTL 736
>gi|390603934|gb|EIN13325.1| hypothetical protein PUNSTDRAFT_78819 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1452
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/541 (31%), Positives = 262/541 (48%), Gaps = 79/541 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + + LV+
Sbjct: 582 VGGTLKEYQIKGLQWMVSLYNNKLNGILADEMGLGKTIQTISLITFLIEVKKQRGPYLVI 641
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S K+ Y G + R + + + VLLTTY+ +
Sbjct: 642 VPLSTMTNWSGEFAKWAPSVKMISYKGNPAQRRALQNEIRMGQFQVLLTTYEYI------ 695
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ A +L S +R+I++GTP+QNN
Sbjct: 696 ------IKDRPILSKIKWVHMIIDEGHRMKNTQSKLAVTLTTYYHSRYRLILTGTPLQNN 749
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGN--DKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P DK L+ E+ + + + L + ++
Sbjct: 750 LPELWALLNFVLPKVFNSVKSFDEWFNTPFANSGTGDKIELNEEEAL--LIIRRLHKVLR 807
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E L K E ++ +++++ Q QLY+ +++ D
Sbjct: 808 PFLLRRLKKDVESE--------LPDKVEKVIKVKMSALQSQLYKQMKKYKMIADGNDAKG 859
Query: 596 LAA--------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
L L+KIC HP L E V D ++ D+ +
Sbjct: 860 KGGGVKGLSNELMQLRKICQHPFLF-----ESVEDKLNPTGQINDSLI------------ 902
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRI 707
S KI + +L KL GH VLIF Q K+++++++ + G+K LR+
Sbjct: 903 ----------RTSGKIELLARILPKLFATGHRVLIFFQMTKVMDIMEDFLRYMGWKHLRL 952
Query: 708 DGTTKASDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
DG TK +R V F AP +F+L+++ GGLGL L AD VI+ D WNP
Sbjct: 953 DGGTKTEERAGHVAKFN----APNSEYLVFILSTRAGGLGLNLQSADTVIIFDSDWNPHA 1008
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKE 813
D Q+ DRA+RIGQ K V + R +T +VEE +Y + ++ + G F + +E
Sbjct: 1009 DLQAQDRAHRIGQTKAVRILRFITEKSVEEAMYARARYKLDIDDKVIQAGRFDNKSTQEE 1068
Query: 814 Q 814
Q
Sbjct: 1069 Q 1069
>gi|385204657|ref|ZP_10031527.1| DNA/RNA helicase, superfamily II, SNF2 family [Burkholderia sp.
Ch1-1]
gi|385184548|gb|EIF33822.1| DNA/RNA helicase, superfamily II, SNF2 family [Burkholderia sp.
Ch1-1]
Length = 1150
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 274/546 (50%), Gaps = 72/546 (13%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKR 354
+P + L +Q++GL W+ L Q G+L DDMGLGKT+Q + LA RL +
Sbjct: 655 VPRGLKAELRTYQQQGLNWMQFLREQDLAGVLADDMGLGKTVQTLAHILAEKEAGRLDRP 714
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
AL+V P TL+ +W +E K+ G K R ++ + ++LTTY ++
Sbjct: 715 ALIVVPTTLVHNWREEARRFAPELKVLVLNGPQRKERFEQIG----EHELILTTYALLWR 770
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+ K L G + +ILDE +KN +T+ A+++ + + HR+ ++GTP+
Sbjct: 771 DQKVLAGHDY------------HLLILDEAQYVKNATTKAAQAIRGLRARHRLCLTGTPL 818
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
+N+L ELW+ F+F P LG K F +++ PI + D L RI
Sbjct: 819 ENHLGELWSQFDFLLPGFLGSQKDFTKRWRNPIEKNGD-----------GVRRALLARRI 867
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNS--EIVLSAFD 592
+P+ LRR K+EV E L K ++ + L QR LYE + E V +A
Sbjct: 868 RPFMLRRRKDEVARE--------LPAKTTILCSVDLEGAQRDLYETVRTAMQEKVRAAVS 919
Query: 593 GSPLA--------ALTILKKICDHPLLL-TKRAAEDVLDGMDSMLNPEDAALAEKLAMHI 643
LA AL L+++C P L+ T +AA D + D E A A +
Sbjct: 920 AQGLARSHIIVLDALLKLRQVCCDPRLVRTLKAAGDAHETHDRTDRIEKGARAMR----- 974
Query: 644 ADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYK 703
S K+ +LS+L +LI EG VL+FSQ ML+LI E++
Sbjct: 975 ----------------SAKLDLLLSMLPELIEEGRRVLLFSQFTGMLSLIAEALEEAAIP 1018
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
++ + G T +DRV V FQ+G+V P+FL++ + GG+GL LT AD VI DP WNP+ +
Sbjct: 1019 YVILTGDT--ADRVTPVERFQQGEV-PLFLISLKAGGVGLNLTAADTVIHYDPWWNPAAE 1075
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA-TEHKEQIRYFSQQD 822
NQ+ DRA+R+GQ K V VY+L+ G++EEKI Q K GL + +E FS D
Sbjct: 1076 NQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILSEDAAGAAKFSDDD 1135
Query: 823 LRELLS 828
L L +
Sbjct: 1136 LDALFA 1141
>gi|388582967|gb|EIM23270.1| hypothetical protein WALSEDRAFT_59530 [Wallemia sebi CBS 633.66]
Length = 1443
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 263/520 (50%), Gaps = 66/520 (12%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALVV 358
IG L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L R L++
Sbjct: 499 IGGQLKEYQLKGLQWMISLYNNRLNGILADEMGLGKTIQTISLVTFLIERKRQNGPYLII 558
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S + Y G + R+ Q + Q VLLTT++ V
Sbjct: 559 VPLSTLTNWAMEFEKWAPSVSVAVYKGPP-QQRKATQQRMRQGFQVLLTTFEYV------ 611
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ +++L + + +R+I++GTP+QNN
Sbjct: 612 ------IKDRPVLSKYNWVFMIMDEGHRLKNTESKLSQTLQQFYKTRYRLILTGTPLQNN 665
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P++ K F E + P +D + V K L + ++P+
Sbjct: 666 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGSNEKMDLNEEESLLVIKRLHKVLRPF 725
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYE--------AFLNSEIVLS 589
LRRLK +V E D L K E +V R++ Q LY A ++
Sbjct: 726 LLRRLKKDV--EKD------LPDKVEKVVKCRMSPLQISLYNQMKKFGQMASISQSDKNG 777
Query: 590 AFDGSPLAAL-----TI--LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMH 642
A G+ + + TI L+KI +HP V D ++S +NP
Sbjct: 778 AVGGNNKSGIKGLQNTIMQLRKIVNHPF---------VFDAIESAVNP------------ 816
Query: 643 IADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGY 702
A +++ ++ ++ K + +L KL GH VLIF Q ++ ++++ + KG
Sbjct: 817 -ASISDDKLYR-----VAGKFELLDRILPKLKATGHRVLIFFQMTAIMTIMEDYLAWKGL 870
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
K LR+DG+TK +R ++N F + D +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 871 KHLRLDGSTKTEERSSLLNKFNDLDSDYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPH 930
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQKK+V + RL+T +VEE+I + +K
Sbjct: 931 ADLQAQDRAHRIGQKKEVRILRLITERSVEEQILARAQYK 970
>gi|357483387|ref|XP_003611980.1| Swi2/Snf2-related chromatin remodeling ATPase [Medicago truncatula]
gi|355513315|gb|AES94938.1| Swi2/Snf2-related chromatin remodeling ATPase [Medicago truncatula]
Length = 750
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 273/543 (50%), Gaps = 72/543 (13%)
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR 354
++P G L +Q +G++WL SL G GIL D MGLGKT+Q GFL+ L L
Sbjct: 175 LMPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKSKGLDGP 234
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG----VLLTTYD 410
+++AP + LS+W+ E+ + Y G + + +++ + G +++T+Y+
Sbjct: 235 YMIIAPLSTLSNWMNEINRFTPTLPAVIYHGNKHQRDEIRRKHMPRTVGPKFPLVITSYE 294
Query: 411 IVRNNSK-SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
I N++K LR S W Y+ +DEGH +KN + + + L I +++++
Sbjct: 295 IAMNDAKKCLRSYS------------WKYLAVDEGHRLKNANCKLVRMLKYISVENKLLL 342
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELP--ILRGNDKHALDREKRIGSAVA 527
+GTP+QNNL ELW+L +F P++ + F+ + L G L+ EKR VA
Sbjct: 343 TGTPLQNNLAELWSLLHFILPDIFSSLEEFESWFNLSGKCTTGATMEELE-EKRRTQVVA 401
Query: 528 KELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIV 587
K L ++P+ LRR+K++V L +K E+I++ +T Q+ L + +N E +
Sbjct: 402 K-LHSILRPFLLRRMKSDV--------ELMLPRKKEIIIYANMTEHQKNLQDHLIN-ETL 451
Query: 588 LSAFDG--------SPLAALTI-LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEK 638
D + L L I L+K+C+HP LL E V DG S P + EK
Sbjct: 452 GKYLDKKRSIGRAPTSLNNLVIQLRKVCNHPDLL-----ESVFDG--SYFYPPVNEIIEK 504
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
K + LL++L H VLIFSQ K+L+++
Sbjct: 505 CG---------------------KFQLLDRLLERLFARNHKVLIFSQWTKVLDIMDYYFS 543
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRVIVVDPA 757
KG++ RIDG+ K DR + + DF + IFLL+++ GGLG+ LT AD I+ D
Sbjct: 544 EKGFEVCRIDGSVKLDDRKRQIQDFNDTTSNCRIFLLSTRAGGLGINLTAADTCILYDSD 603
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE----HKE 813
WNP D Q++DR +RIGQ K V VYRL T +VE ++ ++ K L E H+E
Sbjct: 604 WNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRMLKRAFSKLKLEHVVIEKGQFHQE 663
Query: 814 QIR 816
+ +
Sbjct: 664 RTK 666
>gi|359475198|ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 934
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 176/564 (31%), Positives = 276/564 (48%), Gaps = 70/564 (12%)
Query: 303 MLFPHQREGLRWLW------SLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-----RL 351
L PHQREG+++++ S G IL DDMGLGKT+Q L L +
Sbjct: 181 FLRPHQREGVQFMFDCVSGLSSTANISGCILADDMGLGKTLQSITLLYTLLRQGFDGKAM 240
Query: 352 IKRALVVAPKTLLSHWIKELTA--------VGLSAKIRE--YFGTCVKTRQYELQYVLQD 401
+K+A++V P +L+S+W E+ V L R+ FG T + LQ
Sbjct: 241 VKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTRDDVVFGIDSFTSPHS---PLQ- 296
Query: 402 KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
VL+ +Y+ R +S S D +I DE H +KN T ++L +
Sbjct: 297 --VLIVSYETFRMHSSKFSHSGSC-----------DLLICDEAHRLKNDQTLTNRALAAL 343
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
R+++SGTP+QN+L+E +A+ NF P +LGD +F+ YE PI+ G + A + EK+
Sbjct: 344 ACKRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREPTAAEEEKK 403
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
+G+ + EL + + LRR + S L K +V RL+ Q +LY F
Sbjct: 404 LGAERSAELSSTVNQFILRR--------TNALLSNHLPPKIVEVVCCRLSPLQSELYNHF 455
Query: 582 LNSEIVLSAFD-----GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
++S+ V + LA +T LKK+C+HP L+ + V G ED
Sbjct: 456 IHSKNVKKVINEEMKQSKILAYITALKKLCNHPKLIY----DTVKSGNQGTSGFEDCMRF 511
Query: 637 EKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQE 695
M + +S K+ + LL L + + +++ S + L+L +
Sbjct: 512 FPPEMFSGRSGAWTGGEGIWVELSGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQ 571
Query: 696 SIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADR 750
+ Y +LR+DGTT + R K+VN F + P +FLL+S+ GG GL L +R
Sbjct: 572 LCRERRYPYLRLDGTTSINKRQKLVNRFSD----PLKDEFVFLLSSKAGGCGLNLIGGNR 627
Query: 751 VIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE 810
+++ DP WNP+ D Q+ R +R GQKK V +YR ++ GT+EEK++++Q+ K GL K +
Sbjct: 628 LVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQKVIQQ 687
Query: 811 H-----KEQIRYFSQQDLRELLSL 829
K Q + S +DLR+L S
Sbjct: 688 EQKDSLKTQGNFLSTEDLRDLFSF 711
>gi|303311053|ref|XP_003065538.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240105200|gb|EER23393.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 799
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/571 (29%), Positives = 278/571 (48%), Gaps = 70/571 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++L+ + G I+ D+MGLGKT+Q L
Sbjct: 192 PKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANGCIMADEMGLGKTLQCITLLW 251
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L +++ ++ P TL+ +W EL L F K + EL
Sbjct: 252 TLLKQSPEAGKPTVQKVVIACPATLVGNWANELVK-WLGKDAVNPFVIDGKASKAELTSQ 310
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + VL+ +Y+ +R N L+ + ++ DEGH +K
Sbjct: 311 LRQWAIASGRQVVRPVLIVSYETLRLNVGELKETPI------------GLLLCDEGHRLK 358
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + A R+++SGTPIQN+L E ++L NF P +LG F +++E+PIL
Sbjct: 359 NGESQTFTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPIL 418
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D + E++ G EL + + +RR N++ S L K E +V+
Sbjct: 419 RGRDADGTEEERKKGDECLAELLGIVNKFIIRR-SNDIL-------SKYLPVKYEHVVFC 470
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + S G PL A+ ILKK+C+HP LL A L G +
Sbjct: 471 NLAPFQMDLYNHFIQSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLLNLSAD---LPGSE 527
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
+ P+D E + + ++ S + +LD+++ +
Sbjct: 528 QLF-PDDYVPPEG--------------RGRDRDVKSWYSGKMMVLDRMLARIRQDTNDKI 572
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
++ S + L+L ++ S+GY LR+DGT R K+V+ F + D +FLL+S+ G
Sbjct: 573 VLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDPDGEEFVFLLSSKAG 632
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++Q
Sbjct: 633 GCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQS 692
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
K L + E + R+FS LREL
Sbjct: 693 HKQLLSSCVVDSAEDVERHFSLDSLRELFQF 723
>gi|315053993|ref|XP_003176371.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
gi|311338217|gb|EFQ97419.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
Length = 831
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 174/567 (30%), Positives = 283/567 (49%), Gaps = 62/567 (10%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++L+ G I+ D MGLGKT+Q +
Sbjct: 224 PKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNANGCIMADGMGLGKTLQCITLMW 283
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL--- 395
L +++A++ P TL+ +W EL L F K + EL
Sbjct: 284 TLLKQSPEAGKPTVQKAVIACPATLVGNWANELVK-WLGKDAINPFVIDGKASKAELISQ 342
Query: 396 --QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
Q+ + + VL+ +Y+ +R NS LR D ++ DEGH +K
Sbjct: 343 LRQWAIASGRSVVRPVLIVSYETLRMNSDELR------------DTQIGLLLCDEGHRLK 390
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L ++ R+I+SGTPIQN+L E ++L +F P +LG F + YE+PIL
Sbjct: 391 NADSQTYVALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPIL 450
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D D +++ G+ EL + + +RR N++ S L K E +V+
Sbjct: 451 RGRDADGTDEQQQKGNERLAELLNLVNKFIIRR-SNDLL-------SKYLPVKYEHVVFC 502
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + S G PL A+ ILKK+C+HP LL + +ED L G +
Sbjct: 503 NLAPFQLDLYNHFIQSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLL--KLSED-LPGCE 559
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
PED M +++ D +E S K+ + +L ++ + ++ +++ S
Sbjct: 560 QYF-PED--------MTVSNGRRGD--REVKSWYSGKMMVLDRMLARIRQDTNDKIVLIS 608
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGL 743
+ L+L + ++ Y +R+DGT R K+V+ F + + +FLL+S+ GG G+
Sbjct: 609 NYTQTLDLFERLCRARAYGCIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGI 668
Query: 744 TLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGG 803
L A+R+++ DP WNP+ D Q++ R +R GQ KD VYR + GT+EEKI+++Q K
Sbjct: 669 NLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQS 728
Query: 804 LFKTATEHKEQI-RYFSQQDLRELLSL 829
L + E + R+FS LREL
Sbjct: 729 LSSCVVDSAEDVERHFSLDSLRELFQF 755
>gi|398396748|ref|XP_003851832.1| DNA repair protein, SNF2 family [Zymoseptoria tritici IPO323]
gi|339471712|gb|EGP86808.1| DNA repair protein, SNF2 family [Zymoseptoria tritici IPO323]
Length = 809
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/569 (30%), Positives = 280/569 (49%), Gaps = 71/569 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++++ + +G I+ D+MGLGKT+Q +
Sbjct: 203 PKVPVVIDPRLAKVLRPHQVEGVKFMYRCTTGLIDANAEGCIMADEMGLGKTLQCITLMW 262
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++ ++ P +L+ +W EL L F K + EL
Sbjct: 263 TLLKQSPDAGKSTIQKCVIACPSSLVRNWANELIK-WLGPDAINPFAVDGKASKEELTQQ 321
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
++ + VL+ +Y+ +R LR + M+ DEGH +K
Sbjct: 322 MRSWASATGRAVTRPVLIVSYETLRLYVDELRTPIGL-------------MLCDEGHRLK 368
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q ++L + + R+I+SGTPIQN+L E +AL F P LG F++K+E+PIL
Sbjct: 369 NGESQTFEALNRLNVSKRVILSGTPIQNDLSEYFALLTFANPGYLGTRLEFRKKFEIPIL 428
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D + +++ G+ KEL E + + +RR N++ S L K E +V+
Sbjct: 429 RGRDASGTEADQQKGNERLKELLELVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 480
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + S G PL A+ +LKK+C+HP LL D L G +
Sbjct: 481 NLAPFQLDLYNYFIKSPEIQSLLRGKGSQPLKAIGLLKKLCNHPDLLN---LPDDLPGCE 537
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
S PED D + + ++ S + +LD+++ +
Sbjct: 538 SHF-PEDFV--------------PKDARGRDRDVKPWYSGKMQVLDRMLARIRHDTNDKI 582
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
++ S + L++ ++ ++ Y LR+DGT + R K+V+ F D +FLL+S+ G
Sbjct: 583 VLISNYTQTLDVFEKLCRNRSYGCLRLDGTMAVNKRQKLVDKFNNPDGEEFVFLLSSKAG 642
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 643 GCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQS 702
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 703 HKQSLSSCVVDSAEDVERHFSLDSLRELF 731
>gi|356538178|ref|XP_003537581.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
Length = 757
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/552 (30%), Positives = 277/552 (50%), Gaps = 69/552 (12%)
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR 354
++P G L +Q +G++WL SL G GIL D MGLGKT+Q GFL+ L L
Sbjct: 177 LMPLLTGGKLKTYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKAKGLDGP 236
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTC-----VKTRQYELQYVLQDKGVLLTTY 409
+++AP + LS+W+ E++ S Y G ++ + + + + +++T+Y
Sbjct: 237 YMIIAPLSTLSNWVNEISRFAPSLPAVIYHGDKKQRDEIRRKHMPTRTIGPEFPIVITSY 296
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
+I N++K S W Y+++DEGH +KN + K+L I +++++
Sbjct: 297 EIALNDAKKYFRSYN-----------WKYIVVDEGHRLKNSQCKLVKALKFINVENKLLL 345
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
+GTP+QNNL ELW+L NF P++ + F+ + L N+ + E++ S V +
Sbjct: 346 TGTPLQNNLAELWSLLNFILPDIFASLEEFESWFNLSGKCNNEATKEELEEKRRSQVVAK 405
Query: 530 LRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLN----SE 585
L ++P+ LRR+K++V L +K E+I++ +T Q+ L + +N +
Sbjct: 406 LHAILRPFLLRRMKSDV--------EIMLPRKKEIIIYANMTEHQKNLQDHLVNKTLGNY 457
Query: 586 IVLSAFDGSPLAALTI------LKKICDHPLLLTKRAAEDVLDGMDSMLNPE-DAALAEK 638
+ + G + A+ I L+K+C+HP LL E D DS L P + + +
Sbjct: 458 LKENMSSGLSVPAIMIRNLAIQLRKVCNHPDLL-----ESAFD--DSYLYPPLEEIVGQC 510
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
H+ D LL +L H VLIFSQ K+L+++
Sbjct: 511 GKFHLLD----------------------RLLQRLFSRNHKVLIFSQWTKVLDIMDYYFS 548
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRVIVVDPA 757
KG+ RIDG+ K +R + + DF + + +FLL+++ GGLG+ LT AD I+ D
Sbjct: 549 EKGFAVCRIDGSVKLEERKQQIQDFNDVNSNCRVFLLSTRAGGLGINLTVADTCILYDSD 608
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE----HKE 813
WNP D Q++DR +RIGQ K V VYRL T ++E ++ ++ K L E H+E
Sbjct: 609 WNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIEGRMLKRAFSKLKLEHVVIEKGQFHQE 668
Query: 814 QIRYFSQQDLRE 825
+ + S ++ E
Sbjct: 669 RTKPASMDEIEE 680
>gi|325095549|gb|EGC48859.1| SNF2-family ATP dependent chromatin remodeling factor [Ajellomyces
capsulatus H88]
Length = 1423
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 264/518 (50%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 524 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQNGPFLVI 583
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + + VLLTTY+ +
Sbjct: 584 VPLSTLTNWNIEFEKWAPSVTRIVYKGPPTTRKQQQQAIRWGNFQVLLTTYEYI------ 637
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L + + +R+I++GTP+QNN
Sbjct: 638 ------IKDRPVLSKVKWVHMIVDEGHRMKNAGSKLSCTLTQYYTTRYRLILTGTPLQNN 691
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELW L NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 692 LPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQL--LVIRRLHKVLR 749
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF-LNSEIVLSAFDGS 594
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ ++++V+S G
Sbjct: 750 PFLLRRLKKDV--EKD------LPEKTERVIKCRFSALQAKLYKQLATHNKLVVSDGKGG 801
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP A
Sbjct: 802 KTGVRGLSNMLMQLRKLCNHPF---------VFESVEDEMNPGRAT-------------- 838
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 839 --------NDLIWRTAGKFELLDRILPKFQASGHRVLMFFQMTQIMNIMEDFLRLRGMKY 890
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ +F G FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 891 LRLDGSTKSDDRSDLLKEFNAPGSDYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD 950
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL+T +VEE+I FK
Sbjct: 951 LQAQDRAHRIGQKNEVRILRLITSNSVEERILEAAQFK 988
>gi|322701606|gb|EFY93355.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Metarhizium acridum CQMa 102]
Length = 1416
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 275/519 (52%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L +L LV+
Sbjct: 525 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIERKLQSGPYLVI 584
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
P + L++W E S Y G R+ + + + Q + VLLTTY+ +
Sbjct: 585 VPLSTLTNWNLEFEKWAPSISRIVYKGPP-NARKLQQEKIRQGRFQVLLTTYEYI----- 638
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH-RIIISGTPIQN 476
I D W +MI+DEGH +KN +++ + ++ + + R+I++GTP+QN
Sbjct: 639 -------IKDRPILSKIKWFHMIIDEGHRMKNSNSKLSATIQQYYTTRFRLILTGTPLQN 691
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERI 534
NL ELW++ NF P + K F E + P G DK L E++I V + L + +
Sbjct: 692 NLAELWSMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVL 749
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDG 593
+P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + ++++V+S G
Sbjct: 750 RPFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQAKLYKQMVTHNKLVVSDGKG 801
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
A + L+K+C+HP V D +++++NP M I++
Sbjct: 802 GKTNARGLSNMIMQLRKLCNHPF---------VFDEVENVMNP----------MSISN-- 840
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
++ + + LLD+++P+ GH VL+F Q +++++++ + + ++
Sbjct: 841 ----------DLLWRTAGKFELLDRILPKYQATGHRVLMFFQMTAIMDIMEDYLRYRKFE 890
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+LR+DGTTK+ +R ++ +F D +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 891 YLRLDGTTKSDERSDLLKEFNAPDSKYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 950
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 951 DLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFK 989
>gi|452840044|gb|EME41982.1| hypothetical protein DOTSEDRAFT_81015 [Dothistroma septosporum
NZE10]
Length = 815
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 172/570 (30%), Positives = 276/570 (48%), Gaps = 72/570 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQ-----GKGGILGDDMGLGKTMQICGFLA 344
P+ ++ K+ +L PHQ EG+++L+ +G I+ D+MGLGKT+Q +
Sbjct: 209 PKVPVVIDPKLAKVLRPHQVEGVKFLYKCTTGLIEEGAEGCIMADEMGLGKTLQCITLMW 268
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTA-VGLSAKIREYFGTCVKTRQYELQY 397
L I++ ++ P +L+ +W EL +G A I F K + EL
Sbjct: 269 TLLKQSPDAGKSTIQKCVIACPASLVRNWANELVKWLGEGAIIP--FAVDGKASKEELTQ 326
Query: 398 VLQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLI 447
++ + VL+ +Y+ +R LR + M+ DEGH +
Sbjct: 327 QMRQWASATGRAVIRPVLIVSYETLRLYVDELRNTPI------------GLMLCDEGHRL 374
Query: 448 KNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPI 507
KN + +SL + R+I+SGTPIQN+L E +AL +F LG F+++YELPI
Sbjct: 375 KNAESNTYESLTALNVKKRVILSGTPIQNDLSEYFALLDFANSGYLGTRLDFRKQYELPI 434
Query: 508 LRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVW 567
LR D D+++ G KEL ++ + +RR N++ S L K E +V+
Sbjct: 435 LRSRDADGSDKDREKGEERLKELLGKVNKFIIRR-TNDIL-------SKYLPVKYEHVVF 486
Query: 568 LRLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGM 624
L Q LY F+ S + S G PL A+ +LKK+C+HP LL
Sbjct: 487 CNLAPFQLDLYNYFIKSPEIQSLLRGKGSQPLKAIGLLKKLCNHPDLLNL---------- 536
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHN 679
P+D EK H D D + + ++ S + +L +++
Sbjct: 537 -----PDDLPGCEK---HFPDDYVPKDLRGRDRDVKPYYSGKMQVLARMLARIRQDTNDK 588
Query: 680 VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQV 738
+++ S + L++ ++ + Y LR+DGT + R K+V F + + +FLL+S+
Sbjct: 589 IVLISNYTQTLDVFEKLCRNNNYGSLRLDGTMNVNKRQKLVEKFNDPNGEEFVFLLSSKA 648
Query: 739 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
GG GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR MT GT+EEK++++Q
Sbjct: 649 GGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFMTTGTIEEKVFQRQ 708
Query: 799 IFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 709 SHKQALSSCVVDSAEDVERHFSVDSLRELF 738
>gi|403339166|gb|EJY68833.1| hypothetical protein OXYTRI_10550 [Oxytricha trifallax]
Length = 992
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 266/516 (51%), Gaps = 75/516 (14%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVA 359
G L PHQ + L W+ +L+ G GIL DDMGLGKT+Q + L+ + ++ L++
Sbjct: 85 GGKLMPHQIDSLNWMITLYDLGLNGILADDMGLGKTIQAISMMVYLYQYKKVQGPHLIIT 144
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK--GVLLTTYDIVRNNSK 417
PK+ +S+W+KE K+ T ++ R+ L+ +Q V +TTY+ V S
Sbjct: 145 PKSTISNWMKEFEKWAPFLKVVNLIPT-MEHRKEILKEQMQPGTFNVCVTTYEGVNICSG 203
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
+L+ W Y + DE H +KN + + + ++ +RI+++GTP+QNN
Sbjct: 204 ALQKYD------------WHYQVYDEAHKLKNIDAKISLTSRKLSCRNRILMTGTPLQNN 251
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L+EL+ + N+ PE+ G F + + + K +D ++L + ++P+
Sbjct: 252 LRELFGILNYLMPEIFGSEDDFNDWFCIEDPSVGQKMTIDS--------IQKLHKILRPF 303
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRR+K ++ L K E+ V + +T Q +LYE L + + + + +
Sbjct: 304 LLRRVKKDL--------EVKLPDKIEINVKINMTKMQLELYEQLLKTTSIFNNKNTTVKT 355
Query: 596 -LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQE 654
L L+K C+HP L DG++ PE A E+ HI D
Sbjct: 356 YFNLLMQLRKACNHPYLF---------DGIE----PEGA---EEYGEHIVD--------- 390
Query: 655 QHDNISC-KISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKA 713
+C K+ F+ LL K+ + VLIFSQ +L++I++ +G++F R+DGTT
Sbjct: 391 -----NCGKMRFLDKLLKKISSQKEQVLIFSQFTSVLDIIEDYCLMRGFQFCRLDGTTDL 445
Query: 714 SDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
+R +++ +F AP IFLL+++ GGLGL L A+ V++ D WNP D Q++D
Sbjct: 446 EERERMITEF----TAPNSELFIFLLSTKAGGLGLNLMSANHVVIYDSDWNPQVDLQAMD 501
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
RAYRIGQKKDV +YRL+T ++EEKI +Q K L
Sbjct: 502 RAYRIGQKKDVFIYRLITKPSIEEKIIERQAIKLKL 537
>gi|157108129|ref|XP_001650090.1| helicase [Aedes aegypti]
gi|108879397|gb|EAT43622.1| AAEL004942-PB [Aedes aegypti]
Length = 1455
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 266/546 (48%), Gaps = 76/546 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+ L +Q +GL WL SL GIL D+MGLGKT+Q + L + L++
Sbjct: 602 VNGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKNNGPYLII 661
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+W+ E + + Y G+ R + Q VLLTTY+ V
Sbjct: 662 VPLSTLSNWVLEFEKWAPAVGVVAYKGSPAGRRAVQNQMKATKFNVLLTTYEYV------ 715
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D+A W YMI+DEGH +KN + + L + HR++++GTP+QN
Sbjct: 716 ------IKDKAVLAKISWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNK 769
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P +K L+ E+ I + + L + ++P+
Sbjct: 770 LPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETI--LIIRRLHKVLRPF 827
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV + L K E IV ++ QR LY+ + ++L+ DGS
Sbjct: 828 LLRRLKKEV--------ESQLPDKVEYIVKCDMSGLQRVLYKHMQSKGVLLT--DGSEKG 877
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA- 644
+ + L+K+C+HP + + EK HI
Sbjct: 878 NKGKGGAKALMNTIVQLRKLCNHPFMFQH--------------------IEEKYCDHIGG 917
Query: 645 --DVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGY 702
V+ D ++ S K + +L KL GH VL+F Q + + +I++ + +G+
Sbjct: 918 HGTVSGPDLYR-----ASGKFELLDRILPKLKASGHRVLLFCQMTQCMTIIEDYLSWRGF 972
Query: 703 KFLRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+LR+DGTTKA +R ++ F + +FLL+++ GGLGL L AD V++ D WNP
Sbjct: 973 GYLRLDGTTKAEERGDLLKKFNCKNSEYFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPH 1032
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHK 812
D Q+ DRA+RIGQ+ +V V RLMT +VEE+I Y+ +++ + G+F +
Sbjct: 1033 QDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGS 1092
Query: 813 EQIRYF 818
E+ ++
Sbjct: 1093 ERQQFL 1098
>gi|410918331|ref|XP_003972639.1| PREDICTED: transcription activator BRG1-like [Takifugu rubripes]
Length = 1619
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 172/554 (31%), Positives = 270/554 (48%), Gaps = 74/554 (13%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HS 349
+ST ++ G++ +Q +GL WL SL+ GIL D+MGLGKT+Q + L H
Sbjct: 747 QSTLLVNGQLKQ----YQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 802
Query: 350 RLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
RL L++ P + LS+W+ E + Y G+ R + Q VLLTTY
Sbjct: 803 RLNGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTY 862
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRII 468
+ + I D+ W YMI+DEGH +KN + + L + R++
Sbjct: 863 EYI------------IKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVL 910
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
++GTP+QN L ELWAL NF P + F++ + P +K L+ E+ I + +
Sbjct: 911 LTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETI--LIIR 968
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
L + ++P+ LRRLK EV A L +K E ++ +++ QR LY ++L
Sbjct: 969 RLHKVLRPFLLRRLKKEV--------EAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLL 1020
Query: 589 SAFDGSP------------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
+ DGS + + L+KIC+HP M + + +
Sbjct: 1021 T--DGSEKDKKGKGGTKTLMNTIMQLRKICNHPY----------------MFQQIEESFS 1062
Query: 637 EKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQES 696
E L V D ++ S K + +L KL H VL+F Q ++ ++++
Sbjct: 1063 EHLGFSGGIVQGPDLYR-----ASGKFEVLDRILPKLRATNHKVLLFCQMTSLMTIMEDY 1117
Query: 697 IGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVD 755
+ +K+LR+DGTTKA DR ++ F + + IFLL+++ GGLGL L AD V++ D
Sbjct: 1118 FAYRSFKYLRLDGTTKAEDRGMLLKTFNDPESEYFIFLLSTRAGGLGLNLQSADTVVIFD 1177
Query: 756 PAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFK 806
WNP D Q+ DRA+RIGQ+ +V V RL T +VEEKI Y+ +++ + G+F
Sbjct: 1178 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVSSVEEKILAAAKYKLNVDQKVIQAGMFD 1237
Query: 807 TATEHKEQIRYFSQ 820
+ E+ R F Q
Sbjct: 1238 QKSSSHER-RAFLQ 1250
>gi|240278991|gb|EER42497.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H143]
gi|325090250|gb|EGC43560.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H88]
Length = 974
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 284/561 (50%), Gaps = 58/561 (10%)
Query: 307 HQREGLRWLWSL-----HCQGKGGILGDDMGLGKTMQICGFLAGLFHSR-------LIKR 354
HQREG+++L+ G+G IL D+MGLGKT+Q + L ++K+
Sbjct: 319 HQREGVKFLYECVMGMRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYEAQPVVKK 378
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
AL+V P TL+ +W KE + ++ + +TR + + + V++ Y+ +R
Sbjct: 379 ALIVCPVTLIDNWRKEFRKWLGNERVGVFVADAKRTRLTDFT-MGKSYSVMIIGYERLRT 437
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+ L S I D +I DEGH ++ + A+++ + ++ RI++SGTPI
Sbjct: 438 VQEELSKGSGI-----------DIVIADEGHRMRTVQNKSAQAIQSLNTSKRIVLSGTPI 486
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
QN+L E +A+ +F P LLG K F +++E PI++ AL+++ G A ++EL
Sbjct: 487 QNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIEKGEARSEELTNLT 546
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS 594
+ LRR + + L K E +++ TS Q+ +Y L+S I A S
Sbjct: 547 SLFILRRTADILLK--------YLPPKTEYVLFCNPTSSQKNIYHYVLSSPIFQCALGNS 598
Query: 595 --PLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDF 652
L +TILKK+C+ P LL R ++ +S L ++L + H++ +
Sbjct: 599 ESALQLITILKKLCNSPSLLKPRNSDQT---PNSTLGALISSLPPTVLRHLSPAS----- 650
Query: 653 QEQHDNISCKISFILSLLDKLI-PEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTT 711
S KI + LL + V++ S L+L+ + S FLR+DG+T
Sbjct: 651 -------SGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRLDGST 703
Query: 712 KASDRVKIVNDFQEGDVAPIF--LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDR 769
S R +V+DF + +F LL+++ GG GL L A R+I+ D WNP+TD Q++ R
Sbjct: 704 PPSKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNLIGASRLILFDVDWNPATDIQAMAR 763
Query: 770 AYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSL 829
+R GQK+ VYRL+ G +EEKI+++Q+ K GL + + K + FS+++LR+L L
Sbjct: 764 IHRDGQKRHCRVYRLVLKGALEEKIWQRQVTKIGLADSVMDQKTGVSQFSREELRDLFRL 823
Query: 830 PKQGFDVSLTQQQLHEEHGDQ 850
+G T Q HE G Q
Sbjct: 824 -DEG-----TTCQTHELIGCQ 838
>gi|320039340|gb|EFW21274.1| SNF2 family domain-containing protein [Coccidioides posadasii str.
Silveira]
Length = 797
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/571 (29%), Positives = 278/571 (48%), Gaps = 70/571 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++L+ + G I+ D+MGLGKT+Q L
Sbjct: 190 PKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANGCIMADEMGLGKTLQCITLLW 249
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L +++ ++ P TL+ +W EL L F K + EL
Sbjct: 250 TLLKQSPEAGKPTVQKVVIACPATLVGNWANELVK-WLGKDAVNPFVIDGKASKAELTSQ 308
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + VL+ +Y+ +R N L+ + ++ DEGH +K
Sbjct: 309 LRQWAIASGRQVVRPVLIVSYETLRLNVGELKETPI------------GLLLCDEGHRLK 356
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + A R+++SGTPIQN+L E ++L NF P +LG F +++E+PIL
Sbjct: 357 NGESQTFTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPIL 416
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D + E++ G EL + + +RR N++ S L K E +V+
Sbjct: 417 RGRDADGTEEERKKGDECLAELLGIVNKFIIRR-SNDIL-------SKYLPVKYEHVVFC 468
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + S G PL A+ ILKK+C+HP LL A L G +
Sbjct: 469 NLAPFQMDLYNHFIQSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLLNLSAD---LPGSE 525
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
+ P+D E + + ++ S + +LD+++ +
Sbjct: 526 QLF-PDDYVPPEG--------------RGRDRDVKSWYSGKMMVLDRMLARIRQDTNDKI 570
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
++ S + L+L ++ S+GY LR+DGT R K+V+ F + D +FLL+S+ G
Sbjct: 571 VLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDPDGEEFVFLLSSKAG 630
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++Q
Sbjct: 631 GCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQS 690
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
K L + E + R+FS LREL
Sbjct: 691 HKQLLSSCVVDSAEDVERHFSLDSLRELFQF 721
>gi|225619641|ref|YP_002720898.1| superfamily II D/R helicase [Brachyspira hyodysenteriae WA1]
gi|225214460|gb|ACN83194.1| HepA, Superfamily II D/R helicase, SNF2 family [Brachyspira
hyodysenteriae WA1]
Length = 1033
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 273/547 (49%), Gaps = 89/547 (16%)
Query: 263 HSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQG 322
HSG+ LDD + D++ + P P I +Q G +WL L
Sbjct: 534 HSGIELDLDDNAVDTIANIKRVEYDETP------PKDIVGEFRSYQLIGYKWLRKLADMS 587
Query: 323 KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIRE 382
GIL DDMGLGK+ Q + + +LVVAP + +++W E+ S ++
Sbjct: 588 LNGILADDMGLGKSFQTIATILKEKENGNKLTSLVVAPTSCVANWECEIKKFAPSLEVIV 647
Query: 383 YFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
G +KTR +++ V + V + +Y +R + K+L + F +Y+ILD
Sbjct: 648 LSGN-LKTRMKKIKAV-SNYDVAVISYSTLRRDVKALSENEF------------NYLILD 693
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
E IKN +TQ AK + + S R+ +SGTPI+N++ E+W++F+F P LG +K F E
Sbjct: 694 EAQHIKNANTQNAKMVKSLKSLKRLALSGTPIENSISEMWSMFDFLMPGFLGKHKDFVED 753
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
YE PIL G D S L+ RI P+ LRRLK +V + L K+
Sbjct: 754 YEAPILAGLDS---------SSEALDNLKTRIAPFILRRLKTDVLTD--------LPPKH 796
Query: 563 EMIVWLRLTSCQRQLYEAFLNS---EIVLSA----FDGSPL---AALTILKKICDHPLLL 612
++ + LT Q++LY + L + EI + F S + +ALT L+++C HP L
Sbjct: 797 TVVSYCDLTKDQKELYMSILEAARIEIFETVKRKGFAQSHIEIFSALTRLRQVCCHPRL- 855
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQ-EQHDNISCKISFILSLLD 671
MH DD + E H S K + ++
Sbjct: 856 ----------------------------MH-------DDLRGESH--TSGKFHMFIEMIK 878
Query: 672 KLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPI 731
+ I GH+VL+FS +MLNL++ + G + +DG TK DR+ +V+ F G+ API
Sbjct: 879 EAISGGHSVLVFSSFTRMLNLMRSAFKKLGIDYFYLDGATK--DRMDLVHRFNAGE-API 935
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
FLL+ + G GLTLT+AD V+ D WNP+ ++Q+ DRAYRIGQK+ V Y+L+T GT+E
Sbjct: 936 FLLSLKAAGTGLTLTQADTVMHYDLWWNPAVEDQATDRAYRIGQKRVVTNYKLITRGTIE 995
Query: 792 EKIYRKQ 798
EKI Q
Sbjct: 996 EKILELQ 1002
>gi|157108127|ref|XP_001650089.1| helicase [Aedes aegypti]
gi|108879396|gb|EAT43621.1| AAEL004942-PA [Aedes aegypti]
Length = 1433
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 261/533 (48%), Gaps = 76/533 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+ L +Q +GL WL SL GIL D+MGLGKT+Q + L + L++
Sbjct: 602 VNGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKNNGPYLII 661
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+W+ E + + Y G+ R + Q VLLTTY+ V
Sbjct: 662 VPLSTLSNWVLEFEKWAPAVGVVAYKGSPAGRRAVQNQMKATKFNVLLTTYEYV------ 715
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D+A W YMI+DEGH +KN + + L + HR++++GTP+QN
Sbjct: 716 ------IKDKAVLAKISWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNK 769
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P +K L+ E+ I + + L + ++P+
Sbjct: 770 LPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETI--LIIRRLHKVLRPF 827
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV + L K E IV ++ QR LY+ + ++L+ DGS
Sbjct: 828 LLRRLKKEV--------ESQLPDKVEYIVKCDMSGLQRVLYKHMQSKGVLLT--DGSEKG 877
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA- 644
+ + L+K+C+HP + + EK HI
Sbjct: 878 NKGKGGAKALMNTIVQLRKLCNHPFMFQH--------------------IEEKYCDHIGG 917
Query: 645 --DVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGY 702
V+ D ++ S K + +L KL GH VL+F Q + + +I++ + +G+
Sbjct: 918 HGTVSGPDLYR-----ASGKFELLDRILPKLKASGHRVLLFCQMTQCMTIIEDYLSWRGF 972
Query: 703 KFLRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+LR+DGTTKA +R ++ F + +FLL+++ GGLGL L AD V++ D WNP
Sbjct: 973 GYLRLDGTTKAEERGDLLKKFNCKNSEYFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPH 1032
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLF 805
D Q+ DRA+RIGQ+ +V V RLMT +VEE+I Y+ +++ + G+F
Sbjct: 1033 QDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMF 1085
>gi|255724370|ref|XP_002547114.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida
tropicalis MYA-3404]
gi|240135005|gb|EER34559.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida
tropicalis MYA-3404]
Length = 1680
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 270/538 (50%), Gaps = 72/538 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL GIL D+MGLGKT+Q + L + I LV+
Sbjct: 777 VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLITYLVEVKKIPGPFLVI 836
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S K Y G + + + + + +LLTT++ V
Sbjct: 837 VPLSTITNWNLEFEKWAPSVKKITYKGNPAQRKVMQHEIRTGNFQILLTTFEYV------ 890
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNN 477
I D+ W +MI+DEGH +KN ++ +++L + S +R+I++GTP+QNN
Sbjct: 891 ------IKDKNLLGRIKWVHMIIDEGHRMKNTQSKLSETLTQNYHSDYRLILTGTPLQNN 944
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L E+ + V + L + ++
Sbjct: 945 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETL--LVIRRLHKVLR 1002
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E D L K E +V ++++ Q +LY+ L + + +
Sbjct: 1003 PFLLRRLKKDV--EKD------LPDKVEKVVKCKMSALQSKLYQQMLRYNKLYTGDPENG 1054
Query: 596 LAALTI---------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
LTI LKKIC+HP V + ++ +NP
Sbjct: 1055 AEPLTIKNANNQIMQLKKICNHPF---------VYEEVEHFINPS--------------- 1090
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLR 706
E DD Q ++ K + +L K GH VL+F Q +++N++++ + +G K++R
Sbjct: 1091 IETDD---QIWRVAGKFELLDKVLPKFKATGHKVLMFFQMTQIMNIMEDFLRFRGLKYMR 1147
Query: 707 IDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
+DG TKA DR +++ F D FLL+++ GGLGL L AD VI+ D WNP D Q
Sbjct: 1148 LDGGTKADDRTELLKLFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQ 1207
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKEQ 814
+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +EQ
Sbjct: 1208 AQDRAHRIGQKNEVRILRLITENSVEEMILERAHAKLEIDGKVIQAGKFDNKSTAEEQ 1265
>gi|403215942|emb|CCK70440.1| hypothetical protein KNAG_0E01780 [Kazachstania naganishii CBS
8797]
Length = 1359
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/540 (30%), Positives = 272/540 (50%), Gaps = 76/540 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q GL W+ SL+ GIL D+MGLGKT+Q + L+ + + LV+
Sbjct: 461 VGGTLKEYQIRGLEWMVSLYNNNLNGILADEMGLGKTIQSISLITYLYEMKQDRGPYLVI 520
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E G Y GT + R + Q + VLLTTY+ +
Sbjct: 521 VPLSTIANWTLEFEKWGPGLNTIIYKGTPNQRRTLQHQVKTGNFDVLLTTYEYI------ 574
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
++ S + W +MI+DEGH +KN ++ + ++ + +R+I++GTP+QNN
Sbjct: 575 IKDRSLLCKHE------WAHMIIDEGHRMKNAQSKLSFTIQHYYKTRNRLILTGTPLQNN 628
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P++ K F++ + P + L+ + V + L + ++P+
Sbjct: 629 LPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLVIRRLHKVLRPF 688
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL--NSEIVLSAFDGSP 595
LRRLK EV E D L K E ++ L+ Q+QLY L N+ V +G+
Sbjct: 689 LLRRLKKEV--EKD------LPDKVEKVIKCHLSGLQQQLYGQMLKHNALFVGEGTEGAT 740
Query: 596 LAAL-------TILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
+ + L+KIC+HP V D ++ ++NP
Sbjct: 741 KSGIKGLNNKIMQLRKICNHPF---------VFDEVEGVINP------------------ 773
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
++ ++ +++ LLD+++P+ GH VLIF Q ++++++++ + K K+
Sbjct: 774 ----SRENSDLLYRVAGKFELLDRVLPKFKATGHRVLIFFQMTQVMDIMEDFLRLKNLKY 829
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
+R+DG+TKA DR ++ +F D FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 830 MRLDGSTKAEDRTGMLKEFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD 889
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKEQ 814
Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +EQ
Sbjct: 890 LQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFNNKSTAEEQ 949
>gi|307179542|gb|EFN67856.1| ATP-dependent helicase brm [Camponotus floridanus]
Length = 1996
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 266/547 (48%), Gaps = 84/547 (15%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLLS 365
+Q +GL WL SL GIL D+MGLGKT+Q + L + + L++ P + LS
Sbjct: 1170 YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLS 1229
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W+ E S + Y G+ R + Q VLLTTY+ V I
Sbjct: 1230 NWVLEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYV------------I 1277
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKELWAL 484
D+ W YMI+DEGH +KN + + L + HR++++GTP+QN L ELWAL
Sbjct: 1278 KDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWAL 1337
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHA------LDREKRIGSAVAKELRERIQPYF 538
NF P + F++ + P +K + L+ E+ I + + L + ++P+
Sbjct: 1338 LNFLLPSIFKSCSTFEQWFNAPFATTGEKASICIFVELNEEETI--LIIRRLHKVLRPFL 1395
Query: 539 LRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP--- 595
LRRLK EV + L K E I+ ++ Q+ LY+ + ++L+ DGS
Sbjct: 1396 LRRLKKEV--------ESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLT--DGSEKGK 1445
Query: 596 ---------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD- 645
+ + L+K+C+HP + A+ EK H+
Sbjct: 1446 QGKGGAKALMNTIVQLRKLCNHPFMFQ--------------------AIEEKYCEHVGTP 1485
Query: 646 ----VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKG 701
+ D F+ S K + +L KL H VL+F Q +++ ++++ + +G
Sbjct: 1486 GSNVITGPDLFR-----ASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRG 1540
Query: 702 YKFLRIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
+ +LR+DGTTKA DR ++ F + G +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 1541 FMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNP 1600
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEH 811
D Q+ DRA+RIGQK +V V RLMT +VEE+I Y+ +++ + G+F +
Sbjct: 1601 HQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTG 1660
Query: 812 KEQIRYF 818
E+ ++
Sbjct: 1661 SERQQFL 1667
>gi|261198361|ref|XP_002625582.1| RSC complex subunit [Ajellomyces dermatitidis SLH14081]
gi|239594734|gb|EEQ77315.1| RSC complex subunit [Ajellomyces dermatitidis SLH14081]
Length = 1468
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 264/518 (50%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 567 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQNGPFLVI 626
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + + VLLTTY+ +
Sbjct: 627 VPLSTLTNWNIEFEKWAPSVSRIVYKGPPTTRKQQQQAIRWGNFQVLLTTYEYI------ 680
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L + + +R+I++GTP+QNN
Sbjct: 681 ------IKDRPVLSKVKWVHMIVDEGHRMKNAGSKLSCTLTQYYTTRYRLILTGTPLQNN 734
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELW L NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 735 LPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQL--LVIRRLHKVLR 792
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF-LNSEIVLSAFDGS 594
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ ++++V+S G
Sbjct: 793 PFLLRRLKKDV--EKD------LPEKTERVIKCRFSALQAKLYKQLATHNKLVVSDGKGG 844
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP A
Sbjct: 845 KTGVRGLSNMLMQLRKLCNHPF---------VFESVEDEMNPGRAT-------------- 881
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 882 --------NDLIWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKY 933
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ +F G FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 934 LRLDGSTKSDDRSDLLKEFNAPGSDYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD 993
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL+T +VEE+I FK
Sbjct: 994 LQAQDRAHRIGQKNEVRILRLITSNSVEERILEAAQFK 1031
>gi|241950892|ref|XP_002418168.1| ATP-dependent helicase, putative; SWI/SNF chromatin remodelling
complex protein, putative; SWI/SNF complex component,
putative; transcription regulatory protein, putative
[Candida dubliniensis CD36]
gi|223641507|emb|CAX43468.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
Length = 1663
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 275/542 (50%), Gaps = 80/542 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL GIL D+MGLGKT+Q L L + I LV+
Sbjct: 750 VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLVEVKKITGPFLVI 809
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E S K Y GT + + + + ++LTT++ +
Sbjct: 810 VPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQHDIRTGNFQLVLTTFEYI------ 863
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNN 477
I D+ W +MI+DEGH +KN +++ +++L + S +R+I++GTP+QNN
Sbjct: 864 ------IKDKTLLGRVKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGTPLQNN 917
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P G DK L E+ + V + L + ++
Sbjct: 918 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETL--LVIRRLHKVLR 975
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK +V E D L K E +V +L++ Q +LY+ L ++ + +
Sbjct: 976 PFLLRRLKKDV--EKD------LPNKVEKVVKCKLSALQSKLYQQMLRYNMLYAGDPSNG 1027
Query: 596 LAALTI---------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
+TI LKKIC+HP V + ++ ++NP
Sbjct: 1028 SVPVTIKNANNQIMQLKKICNHPF---------VYEEVEHLINPTI-------------- 1064
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
+ +D I +++ LLDK++P+ GH VLIF Q +++N++++ + +
Sbjct: 1065 -------DTNDQI-WRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRDM 1116
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
K++R+DG TKA DR ++ F D FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 1117 KYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPH 1176
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHK 812
D Q+ DRA+RIGQK +V + RL+T +VEE I + ++ + G F + +
Sbjct: 1177 QDLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAE 1236
Query: 813 EQ 814
EQ
Sbjct: 1237 EQ 1238
>gi|327356382|gb|EGE85239.1| RSC complex subunit [Ajellomyces dermatitidis ATCC 18188]
Length = 1487
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 264/518 (50%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 586 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQNGPFLVI 645
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + + VLLTTY+ +
Sbjct: 646 VPLSTLTNWNIEFEKWAPSVSRIVYKGPPTTRKQQQQAIRWGNFQVLLTTYEYI------ 699
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L + + +R+I++GTP+QNN
Sbjct: 700 ------IKDRPVLSKVKWVHMIVDEGHRMKNAGSKLSCTLTQYYTTRYRLILTGTPLQNN 753
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELW L NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 754 LPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQL--LVIRRLHKVLR 811
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF-LNSEIVLSAFDGS 594
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ ++++V+S G
Sbjct: 812 PFLLRRLKKDV--EKD------LPEKTERVIKCRFSALQAKLYKQLATHNKLVVSDGKGG 863
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP A
Sbjct: 864 KTGVRGLSNMLMQLRKLCNHPF---------VFESVEDEMNPGRAT-------------- 900
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 901 --------NDLIWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKY 952
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ +F G FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 953 LRLDGSTKSDDRSDLLKEFNAPGSDYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD 1012
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL+T +VEE+I FK
Sbjct: 1013 LQAQDRAHRIGQKNEVRILRLITSNSVEERILEAAQFK 1050
>gi|145338703|ref|NP_188552.3| Rad54-like protein [Arabidopsis thaliana]
gi|112419506|dbj|BAF03042.1| Rad54 [Arabidopsis thaliana]
gi|116518260|gb|ABJ99465.1| RAD54-like protein [Arabidopsis thaliana]
gi|332642687|gb|AEE76208.1| Rad54-like protein [Arabidopsis thaliana]
Length = 910
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 292/585 (49%), Gaps = 90/585 (15%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLW----SLHCQGK--GGILGDDMGLGKTMQICGFLAG 345
+T M+ + L PHQREG+++++ LH G IL DDMGLGKT+Q L
Sbjct: 168 TTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYT 227
Query: 346 LFH-----SRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFG-------TCVKTRQY 393
L + ++K+A++V P +L+S+W A+I+++ G C TR
Sbjct: 228 LLCQGFDGTPMVKKAIIVTPTSLVSNW---------EAEIKKWVGDRIQLIALCESTRDD 278
Query: 394 ELQYV---------LQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEG 444
L + LQ VL+ +Y+ R +S S F E+ D +I DE
Sbjct: 279 VLSGIDSFTRPRSALQ---VLIISYETFRMHS-----SKFCQSES------CDLLICDEA 324
Query: 445 HLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYE 504
H +KN T ++L + R+++SGTP+QN+L+E +A+ NF P LGD F+ YE
Sbjct: 325 HRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYE 384
Query: 505 LPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEM 564
PI+ G + A + EK + + + EL ++ + LRR + S L K
Sbjct: 385 APIICGREPTATEEEKNLAADRSAELSSKVNQFILRR--------TNALLSNHLPPKIIE 436
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-----LAALTILKKICDHPLLLTKRAAED 619
+V ++T+ Q LY F++S+ + A + LA +T LKK+C+HP L
Sbjct: 437 VVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYITALKKLCNHPKL-------- 488
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADV-AEKDDFQEQHDNISCKISFILSLLDKLIPE-- 676
+ D + S NP L A++ + + D ++S + +L +L+
Sbjct: 489 IYDTIKSG-NPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLR 547
Query: 677 ---GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVN---DFQEGDVAP 730
+++ S + L+L + + Y FLR+DG+T S R K+VN D + + A
Sbjct: 548 RKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFA- 606
Query: 731 IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTV 790
FLL+S+ GG GL L A+R+++ DP WNP+ D Q+ R +R GQKK V VYR ++ GT+
Sbjct: 607 -FLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTI 665
Query: 791 EEKIYRKQIFKGGLFKTATEHKE------QIRYFSQQDLRELLSL 829
EEK+Y++Q+ K GL K +H++ Q S +DLR+L S
Sbjct: 666 EEKVYQRQMSKEGLQK-VIQHEQTDNSTRQGNLLSTEDLRDLFSF 709
>gi|296125777|ref|YP_003633029.1| SNF2-related protein [Brachyspira murdochii DSM 12563]
gi|296017593|gb|ADG70830.1| SNF2-related protein [Brachyspira murdochii DSM 12563]
Length = 1031
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 184/558 (32%), Positives = 277/558 (49%), Gaps = 89/558 (15%)
Query: 263 HSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQG 322
HSG+ LDD + D++ + P P I +Q G +WL L
Sbjct: 532 HSGIELDLDDNAIDTIANIKRVDYDETP------PKTIVGDFRSYQLVGYKWLRKLADMS 585
Query: 323 KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIRE 382
GIL DDMGLGK+ Q + + +LVVAP + +++W E+ S ++
Sbjct: 586 LNGILADDMGLGKSFQTIATILKEKENGNKLTSLVVAPTSCVANWECEIKKFAPSLEVIV 645
Query: 383 YFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
G +KTR +++ V + V + +Y +R + K+L + F +Y+ILD
Sbjct: 646 LSGN-LKTRMKKIKAV-SNYDVAVISYSTLRRDVKALSENEF------------NYLILD 691
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
E IKN +TQ AK + + S R+ +SGTPI+N++ E+W++F+F P LG +K F E
Sbjct: 692 EAQHIKNANTQNAKMVKSLKSLKRLALSGTPIENSISEMWSMFDFLMPGFLGKHKDFVED 751
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
YE PIL G D S L+ RI P+ LRRLK +V + L K+
Sbjct: 752 YEAPILAGLDS---------SSEALDNLKTRIAPFILRRLKTDVLTD--------LPPKH 794
Query: 563 EMIVWLRLTSCQRQLYEAFLNS---EIVLSA----FDGSPL---AALTILKKICDHPLLL 612
++ + LT Q++LY + L + EI + F S + +ALT L+++C HP L
Sbjct: 795 TVVSYCDLTKDQKELYMSILEAARIEIFETVKRKGFAQSHIEIFSALTRLRQVCCHPRL- 853
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQ-EQHDNISCKISFILSLLD 671
MH DD + E H S K + + ++
Sbjct: 854 ----------------------------MH-------DDLRGESH--TSGKFNMFIEMIR 876
Query: 672 KLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPI 731
+ I GH+VL+FS +MLNL++ + G + +DG TK DR+ +V+ F G+ AP+
Sbjct: 877 EAISGGHSVLVFSSFTRMLNLMRSAFKKLGIDYFYLDGATK--DRMDLVHRFNAGE-APV 933
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
FLL+ + G GLTLT+AD V+ D WNP+ ++Q+ DRAYRIGQK+ V Y+L+T GT+E
Sbjct: 934 FLLSLKAAGTGLTLTQADTVMHYDLWWNPAVEDQATDRAYRIGQKRVVTNYKLITRGTIE 993
Query: 792 EKIYRKQIFKGGLFKTAT 809
EKI Q K L T
Sbjct: 994 EKILELQNKKRVLIDTVV 1011
>gi|213410130|ref|XP_002175835.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Schizosaccharomyces japonicus yFS275]
gi|212003882|gb|EEB09542.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Schizosaccharomyces japonicus yFS275]
Length = 1162
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 261/515 (50%), Gaps = 63/515 (12%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRALVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q ++ L R L++
Sbjct: 326 VGGKLKEYQLKGLQWMISLYNNHLNGILADEMGLGKTIQTISLISHLIEKKRQNGPFLII 385
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G + + Q + VLLTT++ V
Sbjct: 386 VPLSTLTNWTMEFEKWAPSITKIVYKGPPMVRKALHQQVRHANFQVLLTTFEYV------ 439
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPIQNN 477
I D W YMI+DEGH +KN ++ +L S+ +R+I++GTP+QNN
Sbjct: 440 ------IKDRPLLSKIKWIYMIIDEGHRMKNTHSKLTNTLTTYYSSRYRLILTGTPLQNN 493
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P + K F E + P G DK L E+ + V + L + ++
Sbjct: 494 LPELWALLNFVLPRIFNSVKSFDEWFNTPFANAGGQDKMELTEEESL--LVIRRLHKVLR 551
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL------- 588
P+ LRRLK +V A L K E +V ++++ Q +LY ++
Sbjct: 552 PFLLRRLKKDV--------EAELPDKVERVVRCQMSALQLKLYTQMKKHGMLFVQNGTNG 603
Query: 589 -SAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
+ G + LKKIC+HP V + ++ +++P + D+
Sbjct: 604 KTGIKGLQNTVMQ-LKKICNHPF---------VFEEVEKVVDPSGMSF---------DML 644
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRI 707
+ ++ K + +L KL GH VL+F Q +++N++++ + + +K+LR+
Sbjct: 645 WR---------VAGKFELLDRILPKLFKSGHRVLMFFQMTQIMNIMEDYLHYRAWKYLRL 695
Query: 708 DGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
DG+TK+ DR ++++ F + + IFLL+++ GGLGL L AD VI+ D WNP D Q+
Sbjct: 696 DGSTKSDDRSQLLHLFNDPASIYTIFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQA 755
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
DRA+RIGQ K+V ++RL+T +VEE I + +K
Sbjct: 756 QDRAHRIGQTKEVRIFRLITEKSVEENILARAQYK 790
>gi|225557819|gb|EEH06104.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Ajellomyces capsulatus G186AR]
Length = 1423
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/518 (31%), Positives = 264/518 (50%), Gaps = 69/518 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 524 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQNGPFLVI 583
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G +Q + + VLLTTY+ +
Sbjct: 584 VPLSTLTNWNIEFEKWAPSVTRIVYKGPPTTRKQQQQAIRWGNFQVLLTTYEYI------ 637
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN ++ + +L + + +R+I++GTP+QNN
Sbjct: 638 ------IKDRPVLSKVKWVHMIVDEGHRMKNAGSKLSCTLTQYYTTRYRLILTGTPLQNN 691
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELW L NF P + K F E + P G D+ L E+++ V + L + ++
Sbjct: 692 LPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQL--LVIRRLHKVLR 749
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF-LNSEIVLSAFDGS 594
P+ LRRLK +V E D L +K E ++ R ++ Q +LY+ ++++++S G
Sbjct: 750 PFLLRRLKKDV--EKD------LPEKTERVIKCRFSALQAKLYKQLATHNKLIVSDGKGG 801
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
L L+K+C+HP V + ++ +NP A
Sbjct: 802 KTGVRGLSNMLMQLRKLCNHPF---------VFESVEDEMNPGRAT-------------- 838
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+++ + + LLD+++P+ GH VL+F Q +++N++++ + +G K+
Sbjct: 839 --------NDLIWRTAGKFELLDRILPKFQASGHRVLMFFQMTQIMNIMEDFLRLRGMKY 890
Query: 705 LRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
LR+DG+TK+ DR ++ +F G FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 891 LRLDGSTKSDDRSDLLKEFNAPGSDYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD 950
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
Q+ DRA+RIGQK +V + RL+T +VEE+I FK
Sbjct: 951 LQAQDRAHRIGQKNEVRILRLITSNSVEERILEAAQFK 988
>gi|347827598|emb|CCD43295.1| similar to DNA repair and recombination protein RAD54 [Botryotinia
fuckeliana]
Length = 862
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 281/569 (49%), Gaps = 70/569 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++++ + G I+ D+MGLGKT+Q +
Sbjct: 259 PKVPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMVDDRANGCIMADEMGLGKTLQCITLMW 318
Query: 345 GLFHSRL------IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL--- 395
+ I +A++ P +L+ +W EL L + F K + EL
Sbjct: 319 TMLKQSTDAGKPTINKAIIACPSSLVKNWANELVK-WLGPDAIQPFAIDGKASKEELIQQ 377
Query: 396 --QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
Q+ + + V++ +Y+ +R L+ + M+ DEGH +K
Sbjct: 378 LRQWAIASGRSITRPVIIVSYETLRLYVDELKHTQI------------GLMLCDEGHRLK 425
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + R+I+SGTPIQN+L E ++L +F P LLG F++KYELPI
Sbjct: 426 NGDSQTFVALNSLNVTRRVILSGTPIQNDLTEYFSLVSFANPGLLGTRMEFRKKYELPIQ 485
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D D++++ G KEL + + +RR N++ S L K E +V+
Sbjct: 486 RGRDAAGSDKDRQKGDECIKELLNVVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 537
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + + G PL A+ +LKK+C+HP LL +ED L G +
Sbjct: 538 GLAPFQLDLYNHFITSPDIKALLRGKGSQPLKAIGMLKKLCNHPDLLN--LSED-LPGCE 594
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
PED D + + +I S + +LD+++ +
Sbjct: 595 QYW-PEDYV--------------PKDGRGRDRDIKPWYSGKMQVLDRMLARIRQDTNDKI 639
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
++ S + L++ + S+GY LR+DGT + R K+V+ F + D +FLL+S+ G
Sbjct: 640 VLISNYTQTLDMFDKLCRSRGYGSLRLDGTMNVTKRQKLVDKFNDPDGQEFVFLLSSKAG 699
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G GL L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q
Sbjct: 700 GCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQS 759
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELL 827
K L + E + R+FS LREL
Sbjct: 760 HKQSLSSCVVDSAEDVERHFSLDSLRELF 788
>gi|295664715|ref|XP_002792909.1| SNF2 family N-terminal domain containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226278430|gb|EEH33996.1| SNF2 family N-terminal domain containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 682
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 176/568 (30%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++L+ + + G I+ D+MGLGKT+Q L
Sbjct: 75 PRIPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTLQCITLLW 134
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++ ++ P TL+ +W EL L F K + EL
Sbjct: 135 TLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVK-WLGKDAVTPFVIDGKATKAELTSQ 193
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + VL+ +Y+ +R N ++ D ++ DEGH +K
Sbjct: 194 LRQWAISSGRAVVRPVLIVSYETLRLNVDEIK------------DTQIGLLLCDEGHRLK 241
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + R+I+SGTPIQN+L E ++L NF P +LG F +K+E+PIL
Sbjct: 242 NGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKFEMPIL 301
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D D +++ G EL + + +RR N++ S L K E +V+
Sbjct: 302 RGRDADGTDEDRKKGDETVAELLAIVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 353
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + S G PL A+ ILKK+C+HP LL A L G +
Sbjct: 354 GLAPFQTDLYNYFIQSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLLNLGAD---LPGCE 410
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
PED + I D + + S K+ + +L ++ + ++ +++ S
Sbjct: 411 QFF-PED-------YIPIESRGRDRDVRSWY---SGKMMVLDRMLARIRQDTNDKIVLIS 459
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQVGGLG 742
+ L+L + S+ Y LR+DG+ + R K+V+ F EG+ +FLL+S+ GG G
Sbjct: 460 NYTQTLDLFERLCRSRQYGCLRLDGSMNVTKRQKLVDKFNDPEGEEF-VFLLSSKAGGCG 518
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K
Sbjct: 519 INLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQ 578
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELLSL 829
L + E + R+FS LREL
Sbjct: 579 SLSSCVVDSAEDVERHFSLDSLRELFQF 606
>gi|284925122|ref|NP_001165424.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 4 [Xenopus laevis]
gi|59805006|gb|AAX08100.1| Brg1 [Xenopus laevis]
Length = 1600
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 167/530 (31%), Positives = 259/530 (48%), Gaps = 69/530 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALVV 358
+ +L +Q +GL WL SL+ GIL D+MGLGKT+Q + L H R+ L++
Sbjct: 735 VNGILKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLII 794
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+W+ E G S Y G+ R + VLLTTY+ +
Sbjct: 795 VPLSTLSNWVYEFDKWGPSVVKVSYKGSPAARRAFVPMLRSGKFNVLLTTYEYI------ 848
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D+ W YMI+DEGH +KN + + L + R++++GTP+QN
Sbjct: 849 ------IKDKQILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNK 902
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P +K L+ E+ I + + L + ++P+
Sbjct: 903 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETI--LIIRRLHKVLRPF 960
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV A L +K E ++ +++ QR LY ++L+ DGS
Sbjct: 961 LLRRLKKEV--------EAQLPEKVEYVIKCDMSALQRVLYRHMQGKGVLLT--DGSEKD 1010
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ + L+KI +HP M + + +E L
Sbjct: 1011 KKGKGGTKTLMNTIMQLRKISNHPY----------------MFQQIEESFSEHLGFTGGI 1054
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
V +D ++ S K + +L KL H VL+F Q ++ ++++ +G+K+L
Sbjct: 1055 VQGQDVYR-----ASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRGFKYL 1109
Query: 706 RIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
R+DGTTKA DR ++ F E G IFLL+++ GGLGL L AD V++ D WNP D
Sbjct: 1110 RLDGTTKADDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDL 1169
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLF 805
Q+ DRA+RIG + +V V RL T +VEEKI Y+ +++ + G+F
Sbjct: 1170 QAQDRAHRIGPQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF 1219
>gi|449550384|gb|EMD41348.1| hypothetical protein CERSUDRAFT_109939 [Ceriporiopsis subvermispora
B]
Length = 1398
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 266/542 (49%), Gaps = 73/542 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + + LV+
Sbjct: 530 VGGTLKDYQIKGLQWMVSLYNNKLNGILADEMGLGKTIQTISLITFLIEVKKQRGPYLVI 589
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + +++W E + Y G + + + VLLTTY+ +
Sbjct: 590 VPLSTMTNWSGEFAKWAPGVNMVSYKGNPAQRKLLQQDLRTGQFQVLLTTYEYI------ 643
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D A W +MI+DEGH +KN ++ A++L + S +R+I++GTP+QNN
Sbjct: 644 ------IKDRAHLSRIRWVHMIIDEGHRMKNTQSKLAQTLTQYYHSRYRLILTGTPLQNN 697
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGN--DKHALDREKRIGSAVAKELRERIQ 535
L ELWAL NF P++ K F E + P DK L+ E+ + + + L + ++
Sbjct: 698 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANSGTGDKIELNEEEAL--LIIRRLHKVLR 755
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD--G 593
P+ LRRLK +V E L K E ++ +R+++ Q QLY+ +++ D G
Sbjct: 756 PFLLRRLKKDVESE--------LPDKVEKVIKIRMSALQSQLYKQMKKYKMIADGKDSKG 807
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
P L L+KIC HP L + ++ +NP + +KL
Sbjct: 808 KPGGVKGLSNELMQLRKICQHPYLF---------ESVEDKINP-SGIIDDKLI------- 850
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRI 707
S KI + +L K H VLIF Q K+++++++ + G+K+LR+
Sbjct: 851 ----------RTSGKIELLSRILPKFFATDHRVLIFFQMTKVMDIMEDFLKMMGWKYLRL 900
Query: 708 DGTTKASDRVKIVNDF--QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 765
DG TK DR V F + D+ +F+L+++ GGLGL L AD VI+ D WNP D Q
Sbjct: 901 DGGTKTEDRAGHVAQFNAKNSDIR-VFILSTRAGGLGLNLQTADTVIIFDSDWNPHADLQ 959
Query: 766 SVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHKEQIR 816
+ DRA+RIGQ K V + R +T +VEE ++ + ++ + G F + +EQ
Sbjct: 960 AQDRAHRIGQTKVVRILRFITEKSVEEAMFARARYKLDIDDKVIQAGRFDNKSTQEEQEE 1019
Query: 817 YF 818
+
Sbjct: 1020 FL 1021
>gi|156039515|ref|XP_001586865.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980]
gi|154697631|gb|EDN97369.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 861
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 183/619 (29%), Positives = 297/619 (47%), Gaps = 87/619 (14%)
Query: 252 DRRDGKLNKS--------AHSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNM 303
+ +DG+L+K AH L +L V+E E P+ ++ ++ +
Sbjct: 221 EEKDGELDKPVLKLDAPLAHKSLAEIL---GIKKVVEGER------PKVPVVIDPRLAKV 271
Query: 304 LFPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICGFLAGLFHSRL------I 352
L PHQ EG+++++ + G I+ D+MGLGKT+Q + L I
Sbjct: 272 LRPHQIEGVKFMYRCVTGMVDDRANGCIMADEMGLGKTLQCITLMWTLLKQSTDAGKPTI 331
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL-----QYVLQD-----K 402
+A++ P +L+ +W EL L + F K + EL Q+ + +
Sbjct: 332 NKAIIACPSSLVKNWANELVK-WLGPDAIQPFAIDGKASKEELIQQLRQWAIASGRSITR 390
Query: 403 GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP 462
V++ +Y+ +R L+ + M+ DEGH +KN +Q +L +
Sbjct: 391 PVIIVSYETLRLYVDELKHTQI------------GLMLCDEGHRLKNGDSQTFVALNSLN 438
Query: 463 SAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRI 522
R+I+SGTPIQN+L E ++L +F P LLG F++KYELPI RG D D++++
Sbjct: 439 VTRRVILSGTPIQNDLTEYFSLVSFANPGLLGTRMEFRKKYELPIQRGRDAAGSDKDRQK 498
Query: 523 GSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL 582
G K+L + + +RR N++ S L K E +V+ L Q LY F+
Sbjct: 499 GDECIKDLLNVVNKFIIRR-TNDIL-------SKYLPVKYEHVVFCSLAPFQLDLYNHFI 550
Query: 583 NSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKL 639
S + + G PL A+ +LKK+C+HP LL D L G + PED
Sbjct: 551 TSPDIKALLRGKGSQPLKAIGMLKKLCNHPDLLN---LSDDLPGCEKYW-PEDYV----- 601
Query: 640 AMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNVLIFSQTRKMLNLIQ 694
D + + +I S + +LD+++ +++ S + L++
Sbjct: 602 ---------PKDGRGRDRDIKPWYSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDMFD 652
Query: 695 ESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIV 753
+ ++GY LR+DGT + R K+V+ F + D +FLL+S+ GG GL L A+R+++
Sbjct: 653 KLCRNRGYGSLRLDGTMNVTKRQKLVDKFNDPDGQEFVFLLSSKAGGCGLNLIGANRLVL 712
Query: 754 VDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKE 813
DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K L + E
Sbjct: 713 FDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 772
Query: 814 QI-RYFSQQDLRELLSLPK 831
+ R+FS LREL K
Sbjct: 773 DVERHFSLDSLRELFQYRK 791
>gi|156086702|ref|XP_001610760.1| SNF2 helicase [Babesia bovis T2Bo]
gi|154798013|gb|EDO07192.1| SNF2 helicase, putative [Babesia bovis]
Length = 894
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/508 (31%), Positives = 259/508 (50%), Gaps = 65/508 (12%)
Query: 306 PHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK-RALVVAPKTLL 364
P+Q EGLRWL L+ + GIL D+MGLGKT Q LA L SR I LV+APK+ +
Sbjct: 88 PYQLEGLRWLVGLYDRNMNGILADEMGLGKTFQTISLLAYLKESRGIDGLHLVIAPKSTI 147
Query: 365 SHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG--VLLTTYDIVRNNSKSLRGS 422
+WI E+ ++ ++ G + R Y + + L V++T+Y+ +L
Sbjct: 148 GNWINEINRFCPDLRVLKFIGNK-EERSYMVSHELDSSKYDVIVTSYETCCKAKNALSKL 206
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELW 482
F Y+I+DE H IKN ++ ++ + + +R++I+GTP+QNNLKELW
Sbjct: 207 QF------------HYIIIDEAHRIKNEESKLSEVVRVFHTEYRLLITGTPLQNNLKELW 254
Query: 483 ALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRL 542
AL NF PE+ ++ F+ +++L + D +RE R VA+ L E ++P+ LRR
Sbjct: 255 ALLNFLFPEVFASSEEFEAEFDL--VGPKDLSQEERESRNLRIVAR-LHEILRPFMLRRS 311
Query: 543 KNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTI- 601
K +V + + K E+++ + L++ Q++LY+ L + + S + + +
Sbjct: 312 KKDVLTD--------MPPKTELLLMIPLSAMQKRLYKDLLRRTVPDLGAEDSHSSVVKVQ 363
Query: 602 -------LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQE 654
L+K C+HP L D D F E
Sbjct: 364 LLNLAMQLRKACNHPYLFEGWEDRDA-----------------------------DPFGE 394
Query: 655 QHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKAS 714
+ K++ + LL +L+ +LIFSQ +ML+++++ +GY + RIDG T
Sbjct: 395 HLVENAGKLNVVDKLLRRLLKANSRILIFSQMARMLDILEDYCRMRGYSYFRIDGNTSGE 454
Query: 715 DRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRI 773
+R ++ F + + IFLL+++ GGLG+ L AD VI+ D WNP D Q++DRA+RI
Sbjct: 455 ERDDQISSFNDPNSEVSIFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAIDRAHRI 514
Query: 774 GQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GQ K V VYRL+ T+EEKI + K
Sbjct: 515 GQSKTVHVYRLVHEYTIEEKIIERATIK 542
>gi|58260538|ref|XP_567679.1| hypothetical protein CNK02030 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229760|gb|AAW46162.1| hypothetical protein CNK02030 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1558
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 262/506 (51%), Gaps = 62/506 (12%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVA 359
G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + LV+
Sbjct: 691 GGTLKDYQVKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLIEKKKQPGPFLVIV 750
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSL 419
P + L++W E + + G+ R+ + D V LTTY+ + L
Sbjct: 751 PLSTLTNWTMEFERWAPAVRTLILKGSPAVRREAYPRLRAIDFQVCLTTYEYIIKERPLL 810
Query: 420 RGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPIQNNL 478
S I W +MI+DEGH +KN ++ +++L E S+ +R+I++GTP+QNNL
Sbjct: 811 ---SRIK---------WIHMIIDEGHRMKNVKSKLSQTLNEYYSSRYRLILTGTPLQNNL 858
Query: 479 KELWALFNFCCPELLGDNKWFKEKYELPILR-GNDKHALDREKRIGSAVAKELRERIQPY 537
ELWAL NF P++ K F E + P G +K ++ E+ + V K L + ++P+
Sbjct: 859 PELWALLNFVLPKIFNSVKSFDEWFNAPFANTGGEKMEMNEEEAL--LVVKRLHKVLRPF 916
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD-GSPL 596
LRRLK +V E L K E +++ ++++ Q +LYE+ + + + P
Sbjct: 917 LLRRLKKDVESE--------LPDKVEKVIYTKMSALQWKLYESVQKYKTLPTDMSVAKPQ 968
Query: 597 A------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKD 650
AL L+KIC+HP + + ED G N D
Sbjct: 969 KRQNLQNALMQLRKICNHPYVF-REVDEDFTVG-----NTTD------------------ 1004
Query: 651 DFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGT 710
EQ ++ K + +L KL GH VLIF Q +++ ++ + +G+K+ R+DG+
Sbjct: 1005 ---EQIIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDFRGWKYCRLDGS 1061
Query: 711 TKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
TKA DR +++ F + + +P +F+L+++ GGLGL L AD VI+ D WNP D Q+ D
Sbjct: 1062 TKAEDRQTLLSTFNDPN-SPYQVFILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQD 1120
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKI 794
RA+RIGQKK+V V RL++ GTVEE +
Sbjct: 1121 RAHRIGQKKEVRVLRLISSGTVEELV 1146
>gi|9294624|dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana]
Length = 959
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 292/585 (49%), Gaps = 90/585 (15%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLW----SLHCQGK--GGILGDDMGLGKTMQICGFLAG 345
+T M+ + L PHQREG+++++ LH G IL DDMGLGKT+Q L
Sbjct: 168 TTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYT 227
Query: 346 LFH-----SRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFG-------TCVKTRQY 393
L + ++K+A++V P +L+S+W A+I+++ G C TR
Sbjct: 228 LLCQGFDGTPMVKKAIIVTPTSLVSNW---------EAEIKKWVGDRIQLIALCESTRDD 278
Query: 394 ELQYV---------LQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEG 444
L + LQ VL+ +Y+ R +S S F E+ D +I DE
Sbjct: 279 VLSGIDSFTRPRSALQ---VLIISYETFRMHS-----SKFCQSES------CDLLICDEA 324
Query: 445 HLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYE 504
H +KN T ++L + R+++SGTP+QN+L+E +A+ NF P LGD F+ YE
Sbjct: 325 HRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYE 384
Query: 505 LPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEM 564
PI+ G + A + EK + + + EL ++ + LRR + S L K
Sbjct: 385 APIICGREPTATEEEKNLAADRSAELSSKVNQFILRR--------TNALLSNHLPPKIIE 436
Query: 565 IVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-----LAALTILKKICDHPLLLTKRAAED 619
+V ++T+ Q LY F++S+ + A + LA +T LKK+C+HP L
Sbjct: 437 VVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYITALKKLCNHPKL-------- 488
Query: 620 VLDGMDSMLNPEDAALAEKLAMHIADV-AEKDDFQEQHDNISCKISFILSLLDKLIPE-- 676
+ D + S NP L A++ + + D ++S + +L +L+
Sbjct: 489 IYDTIKSG-NPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLR 547
Query: 677 ---GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVN---DFQEGDVAP 730
+++ S + L+L + + Y FLR+DG+T S R K+VN D + + A
Sbjct: 548 RKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFA- 606
Query: 731 IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTV 790
FLL+S+ GG GL L A+R+++ DP WNP+ D Q+ R +R GQKK V VYR ++ GT+
Sbjct: 607 -FLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTI 665
Query: 791 EEKIYRKQIFKGGLFKTATEHKE------QIRYFSQQDLRELLSL 829
EEK+Y++Q+ K GL K +H++ Q S +DLR+L S
Sbjct: 666 EEKVYQRQMSKEGLQK-VIQHEQTDNSTRQGNLLSTEDLRDLFSF 709
>gi|47226612|emb|CAG07771.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1037
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 268/548 (48%), Gaps = 71/548 (12%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALVV 358
I L +Q +GL W+ SL+ GIL D+MGLGKT+Q + L H RL L++
Sbjct: 200 INGTLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPFLII 259
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+W+ EL S Y GT R + Q VLLTTY+ +
Sbjct: 260 VPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGFVPQLRSGKFNVLLTTYEYI------ 313
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D+ W YMI+DEGH +KN + + L + R++++GTP+QN
Sbjct: 314 ------IKDKQILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNK 367
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P ++ L+ E+ I + + L + ++P+
Sbjct: 368 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETI--LIIRRLHKVLRPF 425
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV + L +K E ++ +++ Q+ LY + I+L+ DGS
Sbjct: 426 LLRRLKKEV--------ESQLPEKVEYVIKCDMSAIQKVLYR-HMQKGILLT--DGSEKD 474
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ + LKKIC+HP M + + AE L
Sbjct: 475 KKGKGGAKTLMNTIMQLKKICNHPY----------------MFQHIEESFAEHLGYPNGI 518
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
++ D ++ S K + +L KL H VL+F Q ++ ++++ + + +L
Sbjct: 519 ISGHDLYRA-----SGKFELLDRILPKLQATNHRVLLFCQMTSLMTIMEDYFSYRNFLYL 573
Query: 706 RIDGTTKASDRVKIVNDF-QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
R+DGTTK+ DR ++ F +EG IFLL+++ GGLGL L AD V++ D WNP D
Sbjct: 574 RLDGTTKSEDRAALLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDL 633
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQI 815
Q+ DRA+RIGQ+ +V V RL T +VEEKI Y+ +++ + G+F + E+
Sbjct: 634 QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHER- 692
Query: 816 RYFSQQDL 823
R F Q L
Sbjct: 693 RAFLQAIL 700
>gi|384208550|ref|YP_005594270.1| HepA, Superfamily II D/R helicase, SNF2 family [Brachyspira
intermedia PWS/A]
gi|343386200|gb|AEM21690.1| HepA, Superfamily II D/R helicase, SNF2 family [Brachyspira
intermedia PWS/A]
Length = 1033
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 273/546 (50%), Gaps = 87/546 (15%)
Query: 263 HSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQG 322
HSG+ LDD + D++ + P P I +Q G +WL L
Sbjct: 534 HSGIELDLDDNAVDTIANIKRVEYDETP------PKDIVGEFRSYQLIGYKWLRKLADMS 587
Query: 323 KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIRE 382
GIL DDMGLGK+ Q + + +LVVAP + +++W E+ S ++
Sbjct: 588 LNGILADDMGLGKSFQTIATILKEKENGNKLTSLVVAPTSCVANWECEIKKFAPSLEVIV 647
Query: 383 YFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
G +KTR +++ V + V + +Y +R + K+L + F +Y+ILD
Sbjct: 648 LSGN-LKTRMKKIKAV-SNYDVAVISYSTLRRDVKALSENEF------------NYLILD 693
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
E IKN +TQ AK + + S R+ +SGTPI+N++ E+W++F+F P LG +K F E
Sbjct: 694 EAQHIKNANTQNAKMVKSLKSLKRLALSGTPIENSISEMWSMFDFLMPGFLGKHKDFVED 753
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
YE PIL G D S L+ RI P+ LRRLK +V + L K+
Sbjct: 754 YEAPILAGLDS---------SSEALDNLKTRIAPFILRRLKTDVLTD--------LPPKH 796
Query: 563 EMIVWLRLTSCQRQLYEAFLNS---EIVLSA----FDGSPL---AALTILKKICDHPLLL 612
++ + LT Q++LY + L + EI + F S + +ALT L+++C HP L
Sbjct: 797 TVVSYCDLTKDQKELYMSILEAARIEIFETVKRKGFAQSHIEIFSALTRLRQVCCHPRL- 855
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
MH +D E H S K + + ++ +
Sbjct: 856 ----------------------------MH------EDLRGESH--TSGKFNMFIEMIKE 879
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIF 732
I GH+VL+FS +MLNL++ + G + +DG TK DR+ +V+ F G+ APIF
Sbjct: 880 AISGGHSVLVFSSFTRMLNLMRSAFKKLGIDYFYLDGATK--DRMDLVHRFNAGE-APIF 936
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LL+ + G GLTLT+AD V+ D WNP+ ++Q+ DRAYRIGQK+ V Y+L+T GT+EE
Sbjct: 937 LLSLKAAGTGLTLTQADTVMHYDLWWNPAVEDQATDRAYRIGQKRVVTNYKLITRGTIEE 996
Query: 793 KIYRKQ 798
KI Q
Sbjct: 997 KILELQ 1002
>gi|402222785|gb|EJU02851.1| hypothetical protein DACRYDRAFT_21795 [Dacryopinax sp. DJM-731 SS1]
Length = 2109
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 273/527 (51%), Gaps = 91/527 (17%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-IKRALVVA 359
G LFP Q +G+ WLW + + IL D+MGLGKT+Q+ FL L H + +LVV
Sbjct: 740 GRTLFPFQLQGVTWLWLQWYRKRSAILADEMGLGKTVQVITFL-NLIHVKFRCSPSLVVV 798
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVK---TRQYEL------QYVLQDKG------V 404
P + +++W +E + YFG R++EL YV + V
Sbjct: 799 PNSTITNWTREFARWAPDLHVTPYFGESAARKVVREFELFHTGREDYVGTKRKPELRTDV 858
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
++TTY+ V + S F + W+ +++DE +K+ ST K L E+ +A
Sbjct: 859 IITTYETVTSAKDQADRSVF------NCVTRWEVLVVDESQKLKSDSTLIFKRLSEMNTA 912
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
HR++++GTP+ NN++EL+ L +F PE D + +Y LD EK
Sbjct: 913 HRVLMTGTPLNNNIRELFNLMHFLDPETWDDLPRLEREYA----------ELDEEK---- 958
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-- 582
K+L ++PYFLRR+K ED++ L +NE+IV L +++ Q+++Y L
Sbjct: 959 --IKQLHTELKPYFLRRVK-----EDELD----LPARNEVIVPLSMSTLQKEVYRGLLSK 1007
Query: 583 NSEIV------LSAF--------DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSML 628
N+E++ +SA G+ L L+K HP L++ S L
Sbjct: 1008 NAELIGQLVVNVSASTAKAANIKKGTLTNLLMELRKCLQHPYLVS------------SDL 1055
Query: 629 NPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRK 688
P+D AE +++ S K+ F+ +L +L GH VL+FSQ
Sbjct: 1056 EPKDLPDAELHRIYV--------------EASTKLVFLQKMLPQLKERGHRVLLFSQFVI 1101
Query: 689 MLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDF-QEGDVAPIFLLTSQVGGLGLTLTK 747
L+++++ + +G+KFLR+DG TK SDR K ++ F +EG I+LL+++ GG+G+ LT
Sbjct: 1102 ALDILEDFLVEEGFKFLRLDGNTKQSDRQKGMDQFNREGSEYFIYLLSTRAGGVGINLTA 1161
Query: 748 ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI 794
AD VI+ DP +NP D+Q++ RA+RIGQ K V+V++LM + EEKI
Sbjct: 1162 ADTVIIFDPDFNPHMDHQAIARAHRIGQTKPVLVFKLMIKDSAEEKI 1208
>gi|119188869|ref|XP_001245041.1| hypothetical protein CIMG_04482 [Coccidioides immitis RS]
gi|392867947|gb|EAS33668.2| DNA excision repair protein [Coccidioides immitis RS]
Length = 1011
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 181/596 (30%), Positives = 278/596 (46%), Gaps = 112/596 (18%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-- 347
P S +P I L +Q EG +L L KGGILGDDMGLGKT+Q+ FL +
Sbjct: 205 PYSLGFVPAPIAQWLRDYQVEGASFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGK 264
Query: 348 -----------------HSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKT 390
S R+L++ P TL+ +W EL+ G + + Y G T
Sbjct: 265 TGDERDAKRMRKIRRKGDSIWYPRSLIICPGTLIQNWRSELSRWGWWS-VEVYHG---DT 320
Query: 391 RQYELQYVLQDK-GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
++ LQ + + +L+TTY R N SL + WD ++ DE HL+K+
Sbjct: 321 KEEALQSAISGRVEILITTYTTYRMNKDSL------------NMVEWDCVVADECHLMKD 368
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
++ AKS+ E+ + RI ++GT IQN +ELW L N+ P G +K P+
Sbjct: 369 RRSETAKSMHELNALCRIGLTGTAIQNKYEELWTLLNWTNPGKFGPASTWKTTISDPLKI 428
Query: 510 GNDKHALDREKRIGSAVAKELRERIQP-YFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
G A + AK+L + + P +FLRR+K + + L +K++ +V+
Sbjct: 429 GQSHDATVYQLSKARKTAKKLVKNLLPAFFLRRMKTLIADQ--------LPRKSDRVVFC 480
Query: 569 RLTSCQRQLYEAFLNS---EIVLSAFDGSP-------------------------LAALT 600
LT Q YE L+S E V + D P A++
Sbjct: 481 PLTETQADAYENLLDSAMIECVKMSSDPCPCGSKKKAGWCCYKRIPGGGPWQNYVFPAIS 540
Query: 601 ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNIS 660
L+K+C+H L ++ + PE+ + LAM +VA D ++E +
Sbjct: 541 NLQKLCNHLATLIPQSTD-----------PEEKQ-EKDLAM--LEVAVPDQWRELYRTRG 586
Query: 661 CKISFILSLLDKLIPE------------------GHNVLIFSQTRKMLNLIQESIGSKGY 702
S+L+ PE G VL+FS + ++L ++Q Y
Sbjct: 587 -------SILNYSNPEFCGKWKVLKKLLKWWHANGDKVLVFSHSVRLLRMLQMLFNHTSY 639
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+DGT DR K+V+DF +FL++++ GG+GL +T A++V+VVDP WNPS
Sbjct: 640 NVSYLDGTMSYEDRAKVVDDFNADPRQFVFLISTKAGGVGLNITSANKVVVVDPNWNPSH 699
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
D Q+ DRAYRIGQ++DV V+RL++ GT+EE +Y +QI+K + RYF
Sbjct: 700 DLQAQDRAYRIGQRRDVEVFRLVSAGTIEEIVYARQIYKQQQANIGYNASTERRYF 755
>gi|357128288|ref|XP_003565806.1| PREDICTED: TATA-binding protein-associated factor 172-like
[Brachypodium distachyon]
gi|293630862|gb|ACU12857.2| Mot1 [Brachypodium distachyon]
Length = 2067
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 270/540 (50%), Gaps = 89/540 (16%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-LFHSRLIK-----RALVVAP 360
+Q+EG+ WL L GIL DDMGLGKT+Q +A + SR ++L++ P
Sbjct: 1481 YQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVASDIAESRARNEDKDPKSLIICP 1540
Query: 361 KTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
TL++HW E+ S+ ++ +Y G+ Q+ DK V++T+YDIVR +
Sbjct: 1541 STLVAHWEYEMEKYIDSSIMKPLQYIGSSQDRIVLHSQF---DKFNVIITSYDIVRKDID 1597
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
L ++ W+Y +LDEGH+IKN ++ ++ ++ + HR+I+SGTPIQNN
Sbjct: 1598 FL------------ENIYWNYCVLDEGHIIKNSRSKITSAVKQLKAQHRLILSGTPIQNN 1645
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
+ ELW+LF+F P LG K F+ Y P++ D ++ G + L +++ P+
Sbjct: 1646 VLELWSLFDFLMPGFLGTEKQFQATYGKPLIAAKDSKCSAKDAEAGILAMEALHKQVMPF 1705
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEAFLNS------EIVL 588
LRR K+EV LS E I+ + L+ Q +LY+ F +S ++
Sbjct: 1706 LLRRTKDEV-----------LSDLPEKIIQDRYCNLSLLQLKLYDKFSSSNAKEEISTIV 1754
Query: 589 SAFD-----GSPLA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAE 637
+A + P A AL L K+C HP+L+ + D
Sbjct: 1755 TANESEQSTSQPKATRHVFQALQYLLKLCSHPVLVIGESPPDY----------------- 1797
Query: 638 KLAMHIADV--AEKDDFQEQHDNIS----------CKISFILSLLDKLIPEG-HNVLIFS 684
L H+ D+ DD + H + C I +S D G H VLIF+
Sbjct: 1798 -LVDHLKDIRMGSGDDLHDLHHSPKLVALQEILHECGIGSEISSPDASAAVGQHRVLIFA 1856
Query: 685 QTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q + L++I++ + + +LR+DG+ + R +IV F + LLT+ VGGL
Sbjct: 1857 QHKAFLDIIEKDLFQSHMRSVTYLRLDGSVQTEKRFEIVKSFNSDPTIDVLLLTTHVGGL 1916
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD ++ ++ WNP D Q++DRA+R+GQKK V V+RL+ GT+EEK+ Q FK
Sbjct: 1917 GLNLTSADTLVFMEHDWNPMKDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFK 1976
>gi|738309|prf||1924378A nucler protein GRB1
Length = 1613
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 265/545 (48%), Gaps = 71/545 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALVV 358
+ +L +Q +GL WL SL+ GIL D+MGLGKT+Q + L H R+ L++
Sbjct: 749 VNGVLKQYQIKGLEWLVSLY-NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLII 807
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+W E S Y G+ R + Q VLLTTY+ + N
Sbjct: 808 VPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAKRAFVPQLRSGKFNVLLTTYEYIIKNKHI 867
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
L + W YMI+DEGH +KN + + L + R++++GTP+QN
Sbjct: 868 LAKTR------------WKYMIVDEGHRMKNHHCKLKQVLNTHYVAPRRLLLTGTPLQNK 915
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P +K L+ E+ I + + L + ++P+
Sbjct: 916 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETI--LIIRRLHKVLRPF 973
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV A L +K E ++ +++ QR LY ++L+ DGS
Sbjct: 974 LLRRLKKEV--------EAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLT--DGSEKD 1023
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ + L+KIC+HP M + + +E L
Sbjct: 1024 KKGKGGTKTLMNTIMQLRKICNHPY----------------MFQHIEESFSEHLGFTGGI 1067
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
V D ++ S K + +L KL H VL+F Q ++ ++++ + +G+K+L
Sbjct: 1068 VQGLDMYR-----ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYLAYRGFKYL 1122
Query: 706 RIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
R+ GTTKA DR ++ F E G IFLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 1123 RLAGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDL 1182
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQI 815
Q+ DRA+RIGQ+ +V V RL T +VEEKI Y+ +++ + G+F + E+
Sbjct: 1183 QAQDRAHRIGQRNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHER- 1241
Query: 816 RYFSQ 820
R F Q
Sbjct: 1242 RAFLQ 1246
>gi|392862807|gb|EAS36523.2| SNF2 family domain-containing protein [Coccidioides immitis RS]
Length = 797
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 171/571 (29%), Positives = 277/571 (48%), Gaps = 70/571 (12%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
P+ ++ ++ +L PHQ EG+++L+ + G I+ D+MGLGKT+Q L
Sbjct: 190 PKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANGCIMADEMGLGKTLQCITLLW 249
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L +++ ++ P TL+ +W EL L F K + EL
Sbjct: 250 TLLKQSPEAGKPTVQKVVIACPATLVGNWANELVK-WLGKDAVNPFVIDGKASKAELTSQ 308
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + VL+ +Y+ +R N L+ + ++ DEGH +K
Sbjct: 309 LRQWAIASGRQVVRPVLIVSYETLRLNVGELKETPI------------GLLLCDEGHRLK 356
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + A R+++SGTPIQN+L E ++L NF P +LG F +++E+PIL
Sbjct: 357 NGESQTFTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPIL 416
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D + E++ G EL + + +RR N++ S L K E +V+
Sbjct: 417 RGRDADGTEEERKKGDECLAELLGIVNKFIIRR-SNDIL-------SKYLPVKYEHVVFC 468
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + S G PL A+ ILKK+C+HP LL A L G +
Sbjct: 469 NLAPFQMDLYNHFIQSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLLNLSAD---LPGSE 525
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPE-----GHNV 680
P+D E + + ++ S + +LD+++ +
Sbjct: 526 QFF-PDDYVPPEG--------------RGRDRDVKSWYSGKMMVLDRMLARIRQDTNDKI 570
Query: 681 LIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVG 739
++ S + L+L ++ S+GY LR+DGT R K+V+ F + D +FLL+S+ G
Sbjct: 571 VLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDPDGEEFVFLLSSKAG 630
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQI 799
G G+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + G++EEKI+++Q
Sbjct: 631 GCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQS 690
Query: 800 FKGGLFKTATEHKEQI-RYFSQQDLRELLSL 829
K L + E + R+FS LREL
Sbjct: 691 HKQLLSSCVVDSAEDVERHFSLDSLRELFQF 721
>gi|366987377|ref|XP_003673455.1| hypothetical protein NCAS_0A05110 [Naumovozyma castellii CBS 4309]
gi|342299318|emb|CCC67069.1| hypothetical protein NCAS_0A05110 [Naumovozyma castellii CBS 4309]
Length = 875
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 176/589 (29%), Positives = 285/589 (48%), Gaps = 86/589 (14%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSL-------------------------HCQGKG 324
P ++ K+ +L PHQ EG+++L+ + G
Sbjct: 248 PNVPVVIDPKLTKILRPHQVEGVKFLYRCVTGLVMKDFLDAEAVNTGIVKTEQNNRGAYG 307
Query: 325 GILGDDMGLGKTMQICGFLAGLFHS-----RLIKRALVVAPKTLLSHWIKELT------- 372
I+ D+MGLGKT+Q + L RLI + ++V P +L+++W EL
Sbjct: 308 CIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELVKWLGPGT 367
Query: 373 ----AV-GLSAKIREYFGTCVKTRQYELQYVLQD--KGVLLTTYDIVRNNSKSLRGSSFI 425
AV G + + T + Q ++ K VL+ +Y+ +R N LR
Sbjct: 368 LSPLAVDGKKSSLASGNSTVAEAVHSWAQATGRNIVKPVLIISYETLRRNVDQLRNCDV- 426
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALF 485
M+ DEGH +KN + +L I R+I+SGTPIQN+L E +AL
Sbjct: 427 -----------GLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALL 475
Query: 486 NFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNE 545
NF P LLG F++ +ELPILR D + D E G ++L + + +RR N+
Sbjct: 476 NFSNPGLLGTRSEFRKNFELPILRSRDADSTDEEITKGEEQLQKLSTIVSKFIIRR-TND 534
Query: 546 VFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDG----SPLAALTI 601
+ S L K E ++++ L Q+ +Y L S V G PL A+ +
Sbjct: 535 IL-------SKYLPCKYEHVIFVNLKPFQKDVYHRLLKSRDVNKMVKGVGGTQPLKAIGV 587
Query: 602 LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISC 661
LKK+C+HP L+ ++ +D D + P++ + ++ D Q Q S
Sbjct: 588 LKKLCNHPNLIN---LDEEIDDFDDLEIPDEYNMQG---------SKSRDVQPQ---FSG 632
Query: 662 KISFILSLLDKLIPEGHN-VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIV 720
K + + L K+ E + +++ S + L+LI++ +K Y +R+DGT + R K+V
Sbjct: 633 KFAILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRNKHYSSVRLDGTMTINKRQKLV 692
Query: 721 NDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDV 779
+ F + + IFLL+S+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKKD
Sbjct: 693 DRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDC 752
Query: 780 VVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELL 827
+YR ++ G++EEKIY++Q K L + KE + R FS +LR+L
Sbjct: 753 FIYRFISTGSIEEKIYQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLF 801
>gi|332025170|gb|EGI65350.1| ATP-dependent helicase brm [Acromyrmex echinatior]
Length = 1953
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 165/543 (30%), Positives = 262/543 (48%), Gaps = 75/543 (13%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLLS 365
+Q +GL WL SL GIL D+MGLGKT+Q + L + + L++ P + LS
Sbjct: 1126 YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLS 1185
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFI 425
+W+ E S + Y G+ R + Q VLLTTY+ V I
Sbjct: 1186 NWVLEFEKWAPSVVVVSYKGSPAGRRTIQSQMRATKFNVLLTTYEYV------------I 1233
Query: 426 SDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNNLKELWAL 484
D+ W YMI+DEGH +KN + + L + HR++++GTP+QN L ELWAL
Sbjct: 1234 KDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWAL 1293
Query: 485 FNFCCPELLGDNKWFKEKYELPILRGNDKHA-------LDREKRIGSAVAKELRERIQPY 537
NF P + F++ + P +K + L+ E+ I + + L + ++P+
Sbjct: 1294 LNFLLPSIFKSCSTFEQWFNAPFATTGEKASILHKYVELNEEETI--LIIRRLHKVLRPF 1351
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV + L K E I+ ++ Q+ LY+ + ++L+ DGS
Sbjct: 1352 LLRRLKKEV--------ESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLT--DGSEKG 1401
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ + L+K+C+HP + A+ EK H+
Sbjct: 1402 KQGKGGAKALMNTIVQLRKLCNHPFMFQ--------------------AIEEKYCEHVGT 1441
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
S K + +L KL H VL+F Q +++ ++++ + +G+ +L
Sbjct: 1442 QGSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYL 1501
Query: 706 RIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
R+DGTTKA DR ++ F + G +FLL+++ GGLGL L AD VI+ D WNP D
Sbjct: 1502 RLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDL 1561
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQI 815
Q+ DRA+RIGQK +V V RLMT +VEE+I Y+ +++ + G+F + E+
Sbjct: 1562 QAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQ 1621
Query: 816 RYF 818
++
Sbjct: 1622 QFL 1624
>gi|226293396|gb|EEH48816.1| DNA repair and recombination protein RAD54 [Paracoccidioides
brasiliensis Pb18]
Length = 863
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++L+ + + G I+ D+MGLGKT+Q L
Sbjct: 256 PRIPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTLQCITLLW 315
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYV 398
L I++ ++ P TL+ +W EL L F K + EL
Sbjct: 316 TLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVK-WLGKDAVTPFVVDGKATKAELTSQ 374
Query: 399 LQD----------KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
L+ + VL+ +Y+ +R N ++ D ++ DEGH +K
Sbjct: 375 LRQWAISSGRAVVRPVLIVSYETLRLNVDEIK------------DTQIGLLLCDEGHRLK 422
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N +Q +L + R+I+SGTPIQN+L E ++L NF P +LG F +K+E+PIL
Sbjct: 423 NGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKFEMPIL 482
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
RG D D +++ G EL + + +RR N++ S L K E +V+
Sbjct: 483 RGRDADGTDEDRKKGDETVAELLAIVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 534
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q LY F+ S + S G PL A+ ILKK+C+HP LL A L G +
Sbjct: 535 GLAPFQTDLYNYFIQSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLLNLGAD---LPGCE 591
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
P+D + I D + + S K+ + +L ++ + ++ +++ S
Sbjct: 592 QFF-PDD-------YIPIESRGRDRDVRSWY---SGKMMVLDRMLARIRQDTNDKIVLIS 640
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQ--EGDVAPIFLLTSQVGGLG 742
+ L+L + S+ Y LR+DG+ + R K+V+ F EG+ +FLL+S+ GG G
Sbjct: 641 NYTQTLDLFERLCRSRQYGCLRLDGSMNVTKRQKLVDKFNDPEGEEF-VFLLSSKAGGCG 699
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
+ L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR + GT+EEKI+++Q K
Sbjct: 700 INLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQ 759
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELLSL 829
L + E + R+FS LREL
Sbjct: 760 SLSSCVVDSAEDVERHFSLDSLRELFQF 787
>gi|157128256|ref|XP_001661368.1| hypothetical protein AaeL_AAEL002341 [Aedes aegypti]
gi|108882255|gb|EAT46480.1| AAEL002341-PA [Aedes aegypti]
Length = 851
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 173/570 (30%), Positives = 276/570 (48%), Gaps = 55/570 (9%)
Query: 289 GPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGK-------GGILGDDMGLGKTMQICG 341
P S +P + L PHQREG+ +L+ + G IL D+MGLGKT+Q
Sbjct: 230 APLSKVTVPYALSKHLRPHQREGVSFLYECVLGFRYTDADRFGAILADEMGLGKTLQCIS 289
Query: 342 FL-----AGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQ 396
+ G + ++KR L+V P +L+ +W +E++ + +I + + + Q
Sbjct: 290 LIYTLMKQGPYSQPILKRILIVTPSSLMENWDREISKWLKTERIFTFIVSPTNPLKKYAQ 349
Query: 397 YVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAK 456
+L+ +Y+++ + L D +D MI DEGH +KN + + +
Sbjct: 350 SA--HIPILIISYELLSKQIREL------------DSVKFDLMICDEGHRLKNSAIKTSS 395
Query: 457 SLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHAL 516
L + RI+++GTPIQN+L+E ++L F P LLG FK K+E PIL+ L
Sbjct: 396 ILDAVECPRRILLTGTPIQNDLQEFYSLITFVNPGLLGTYSEFKTKFENPILQSQQPGVL 455
Query: 517 DREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQ 576
+G A +EL + LRR + EV ++ L K E +++ + Q
Sbjct: 456 PMFANLGKARLEELNSITSSFILRRTQ-EVINK-------YLPGKQEAVIFCHPSKLQET 507
Query: 577 LYEAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
L + PL +T+LKKIC+HP L+ DV + +LN
Sbjct: 508 LLRTAIQFYEKSDRSTYFPLQLITVLKKICNHPSLIASTEKIDVGGSLIKLLNDNLPP-- 565
Query: 637 EKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQES 696
+Q+ S K++ + SLL+ LI +I S K L++I
Sbjct: 566 ---------------WQDMGPTDSGKLAVLDSLLETLIQRQEKAVIVSYYGKTLDMIMGL 610
Query: 697 IGSKGYKFLRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRVIVVD 755
YK+ R+DG+T + DR KIV+ F IFLL+++ GG+GL LT A R+I+ D
Sbjct: 611 CEHYNYKYCRLDGSTPSQDRCKIVSSFNSPSSDTFIFLLSAKAGGIGLNLTGASRLILYD 670
Query: 756 PAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI 815
WNP++D Q++ R +R GQ ++V +YRL+T ++EEKIY++QI K L T + K+ +
Sbjct: 671 NDWNPASDLQAMSRIWRDGQTRNVFIYRLITAFSIEEKIYQRQISKTSLSGTVVDLKQNL 730
Query: 816 R--YFSQQDLRELLSLPKQGFDVSLTQQQL 843
FS ++L++L D LT Q L
Sbjct: 731 SNLKFSDEELKDLFFFTDDN-DDCLTHQML 759
>gi|303323511|ref|XP_003071747.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111449|gb|EER29602.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1011
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 180/596 (30%), Positives = 279/596 (46%), Gaps = 112/596 (18%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-- 347
P S ++P I L +Q EG +L L KGGILGDDMGLGKT+Q+ FL +
Sbjct: 205 PYSLGLVPAPIAQWLRDYQVEGASFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGK 264
Query: 348 -----------------HSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKT 390
S R+L++ P TL+ +W EL+ G + + Y G T
Sbjct: 265 TGDERDAKRMRKIRRKGDSIWYPRSLIICPGTLIQNWRSELSRWGWWS-VEVYHG---DT 320
Query: 391 RQYELQYVLQDK-GVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
++ LQ + + +L+TTY R N SL + WD ++ DE HL+K+
Sbjct: 321 KEEALQSAISGRVEILITTYTTYRMNKDSL------------NMVEWDCVVADECHLMKD 368
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
++ AKS+ E+ + RI ++GT IQN +ELW L N+ P G +K P+
Sbjct: 369 RRSETAKSMHELNALCRIGLTGTAIQNKYEELWTLLNWTNPGKFGPASTWKTTISDPLKI 428
Query: 510 GNDKHALDREKRIGSAVAKELRERIQP-YFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
G A + AK+L + + P +FLRR+K + + L +K++ +V+
Sbjct: 429 GQSHDATVYQLSKARKTAKKLVKNLLPAFFLRRMKTLIADQ--------LPRKSDRVVFC 480
Query: 569 RLTSCQRQLYEAFLNS---EIVLSAFDGSP-------------------------LAALT 600
LT Q YE L+S E + + D P A++
Sbjct: 481 PLTETQADAYENLLDSAMIECIKMSSDPCPCGSKKKAGWCCYKRIPGGGPWQNYVFPAIS 540
Query: 601 ILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNIS 660
L+K+C+H L ++ + PE+ + LAM +VA D ++E +
Sbjct: 541 NLQKLCNHLATLIPQSTD-----------PEEKQ-EKDLAM--LEVAVPDQWRELYRTRG 586
Query: 661 CKISFILSLLDKLIPE------------------GHNVLIFSQTRKMLNLIQESIGSKGY 702
S+L+ PE G VL+FS + ++L ++Q Y
Sbjct: 587 -------SILNYSNPEFCGKWKVLKKLLKWWHANGDKVLVFSHSVRLLRMLQMLFNHTSY 639
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+DGT DR K+V+DF +FL++++ GG+GL +T A++V+VVDP WNPS
Sbjct: 640 NVSYLDGTMSYEDRAKVVDDFNADPRQFVFLISTKAGGVGLNITSANKVVVVDPNWNPSH 699
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 818
D Q+ DRAYRIGQ++DV V+RL++ GT+EE +Y +QI+K + RYF
Sbjct: 700 DLQAQDRAYRIGQRRDVEVFRLVSAGTIEEIVYARQIYKQQQANIGYNASTERRYF 755
>gi|322707206|gb|EFY98785.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Metarhizium anisopliae ARSEF 23]
Length = 1416
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 275/519 (52%), Gaps = 71/519 (13%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L +L LV+
Sbjct: 525 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIERKLQSGPYLVI 584
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
P + L++W E S Y G R+ + + + Q + VLLTTY+ +
Sbjct: 585 VPLSTLTNWNLEFEKWAPSISRIVYKGPP-NARKLQQEKIRQGRFQVLLTTYEYI----- 638
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQN 476
I D W +MI+DEGH +KN +++ + ++ + + R+I++GTP+QN
Sbjct: 639 -------IKDRPILSKIKWFHMIIDEGHRMKNSNSKLSATIQQYYVTRFRLILTGTPLQN 691
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERI 534
NL ELW++ NF P + K F E + P G DK L E++I V + L + +
Sbjct: 692 NLAELWSMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMELTEEEQI--LVIRRLHKVL 749
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDG 593
+P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + ++++V+S G
Sbjct: 750 RPFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQAKLYKQMVTHNKLVVSDGKG 801
Query: 594 SPLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVA 647
A + L+K+C+HP V D +++++NP M I++
Sbjct: 802 GKTNARGLSNMIMQLRKLCNHPF---------VFDEVENVMNP----------MSISN-- 840
Query: 648 EKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYK 703
++ + + LLD+++P+ GH VL+F Q +++++++ + + ++
Sbjct: 841 ----------DLLWRTAGKFELLDRILPKYQATGHRVLMFFQMTAIMDIMEDYLRYRKFE 890
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPST 762
+LR+DGTTK+ +R ++ +F D +FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 891 YLRLDGTTKSDERSDLLKEFNAPDSKYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQ 950
Query: 763 DNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q+ DRA+RIGQK +V + RL++ +VEEKI + FK
Sbjct: 951 DLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFK 989
>gi|372268981|ref|ZP_09505029.1| non-specific serine/threonine protein kinase [Alteromonas sp. S89]
Length = 1067
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 169/510 (33%), Positives = 271/510 (53%), Gaps = 68/510 (13%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRA 355
P + L P+Q++GL WL L G GGIL DDMGLGKT+Q + + S L A
Sbjct: 599 PKHLHATLRPYQQDGLNWLAFLQGYGFGGILADDMGLGKTLQTLALVQHMKESGSLTAPA 658
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
+VVAP +L +WI E ++ G R+ V +++TTY ++ +
Sbjct: 659 MVVAPTSLTGNWIHEAAKFTPQLQVTLIHG---PHREAAFPQVTHSD-LVITTYPLLARD 714
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
+ R +F ++LDE IKNPST+ A+ + I S+ R+ +SGTP++
Sbjct: 715 YEHYRDHAF------------SLLVLDEAQAIKNPSTKVAEYVRRIRSSTRLCLSGTPLE 762
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
N+L ELWAL +F P LLG +K F++ Y PI + H D E++ +EL +++
Sbjct: 763 NHLGELWALMDFALPGLLGGSKAFQQAYRNPI----ENHG-DHERQ------QELARKVR 811
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRR K+EV A L K E + ++ L S QR LYE+
Sbjct: 812 PFMLRRTKSEVV--------ADLPPKTETMQYVELGSKQRSLYES--------------- 848
Query: 596 LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA-MHIADVAEKDDFQE 654
+++ K+I D L+ + + ++ +D++L + +L + +A E+
Sbjct: 849 -VRISMEKRIRD--LVARQGLGKSQIEFLDALLKLRQTCIDPRLVKLEMAAGIEE----- 900
Query: 655 QHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKAS 714
S K++++ L +L+ EG ++LIFSQ ++L LI++ + + ++ ++ G T+
Sbjct: 901 -----SAKLNWLEENLPQLLEEGRSMLIFSQFTQVLKLIEQQLDEQQVEYAKLTGQTR-- 953
Query: 715 DRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIG 774
+R + ++ FQ GDV +FL++ + GG GL LT AD VI +DP WNP+ +NQ+ DRA+RIG
Sbjct: 954 NRQQAIDRFQSGDVR-VFLISLKAGGAGLNLTAADVVIHMDPWWNPAVENQATDRAHRIG 1012
Query: 775 QKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
Q K V VY+L+ TVEE+I + Q K L
Sbjct: 1013 QDKPVFVYKLIAADTVEERIQKMQQQKQAL 1042
>gi|328771548|gb|EGF81588.1| hypothetical protein BATDEDRAFT_183, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 1186
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 277/542 (51%), Gaps = 85/542 (15%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA---- 355
IG L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + + LI+R
Sbjct: 391 IGGTLKDYQIKGLQWMVSLYNNRLNGILADEMGLGKTIQTLSLI-----TYLIERKKQPG 445
Query: 356 --LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG--VLLTTYDI 411
LV+ P + +++W+ E + Y G+ ++ + L V++ G VLLTT++
Sbjct: 446 PFLVIVPLSTMTNWVIEFERWAPAVIKVVYKGSPIERKN--LASVVRAGGFNVLLTTFEY 503
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIIS 470
+ N D W +MI+DEGH +KN ++ + +L + SA +R+I++
Sbjct: 504 IINPK----------DRPVLSKVKWVHMIIDEGHRMKNAESRLSTTLAQYYSARYRLILT 553
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPI--LRGNDKHALDREKRIGSAVAK 528
GTP+QNNL ELWAL NF P++ K F E + P G D+ L+ E+++ + +
Sbjct: 554 GTPLQNNLPELWALLNFILPKVFNSVKSFDEWFNSPFSGTTGQDRIDLNEEEQL--LIIR 611
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
L + ++P+ LRRLK +V E L K E IV +++ Q +LYE +
Sbjct: 612 RLHKVLRPFLLRRLKKDVESE--------LPDKVETIVKCPMSALQLRLYEQIRHRRFGG 663
Query: 589 SAFDGSPLAALTIL--KKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
F + I+ +KIC+HP V D ++ ++NP
Sbjct: 664 DGFSKKKVLNNLIMQFRKICNHPF---------VFDQVEELINPSKGT------------ 702
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
++ +++ LLD+++P+ GH +L+F Q ++++++++ + +G+
Sbjct: 703 ----------NDTLFRVAGKFELLDRILPKFKVSGHRILMFFQMTQVMDIMEDYLRWRGH 752
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+LR+DG TK +R ++ F D P IFLL+++ GGLGL L AD VI+ D WNP
Sbjct: 753 IYLRLDGHTKPEERTVMLKTFNRPDDPPFIFLLSTRAGGLGLNLQTADTVIIYDSDWNPH 812
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEHK 812
D Q+ DRA+RIGQKK+V + RL+T +VEE I + ++ + G F T +
Sbjct: 813 QDLQAQDRAHRIGQKKEVRILRLITSKSVEETILARAQYKLDIDGKVIQAGKFDNKTSER 872
Query: 813 EQ 814
E+
Sbjct: 873 ER 874
>gi|6822074|emb|CAB71002.1| TATA box binding protein (TBP) associated factor (TAF)-like protein
[Arabidopsis thaliana]
Length = 2049
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 277/566 (48%), Gaps = 82/566 (14%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL-- 351
Y L ++ L +Q+EG+ WL L GIL DDMGLGKT+Q +A R
Sbjct: 1434 YKLCTELKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGS 1493
Query: 352 -----IKRALVVAPKTLLSHWIKELTA-VGLSA-KIREYFGTCVKTRQYELQYVLQDKGV 404
+ +++V P TL+ HW E+ + LS + +Y G+ + L+ + V
Sbjct: 1494 TDELDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSA--QDRVSLREQFNNHNV 1551
Query: 405 LLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA 464
++T+YD+VR + L S W+Y ILDEGH+IKN ++ ++ ++ +
Sbjct: 1552 IITSYDVVRKDVDYLTQFS------------WNYCILDEGHIIKNAKSKITAAVKQLKAQ 1599
Query: 465 HRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGS 524
HR+I+SGTPIQNN+ ELW+LF+F P LG + F+ Y P+L D ++ G
Sbjct: 1600 HRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGV 1659
Query: 525 AVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEAF 581
+ L +++ P+ LRR K EV LS E I+ + L+ Q +LYE F
Sbjct: 1660 LAMEALHKQVMPFLLRRTKEEV-----------LSDLPEKIIQDRYCDLSPVQLKLYEQF 1708
Query: 582 LNS----EI-VLSAFDGSP----------------LAALTILKKICDHPLL-LTKRAAED 619
S EI + DGS AL L K+C HPLL L + E
Sbjct: 1709 SGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEP 1768
Query: 620 VLDGMDSMLNPEDAALAE--KLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG 677
V + +M+N + E K+ VA ++ +E C I S D + G
Sbjct: 1769 VASDLAAMINGCSDIITELHKVQHSPKLVALQEILEE------CGIGSDASSSDGTLSVG 1822
Query: 678 -HNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFL 733
H VLIF+Q + +L++I++ + K ++R+DG+ R +IV F + L
Sbjct: 1823 QHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLL 1882
Query: 734 LTSQVGGLGLTLTKADRVIVVDPAWNPSTDN-----------QSVDRAYRIGQKKDVVVY 782
LT+ VGGLGL LT AD ++ ++ WNP D+ Q++DRA+R+GQK+ V V+
Sbjct: 1883 LTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQFANIELNKLWQAMDRAHRLGQKRVVNVH 1942
Query: 783 RLMTCGTVEEKIYRKQIFKGGLFKTA 808
RL+ GT+EEK+ Q FK + T
Sbjct: 1943 RLIMRGTLEEKVMSLQKFKVSVANTV 1968
>gi|445064189|ref|ZP_21376280.1| HepA, Superfamily II D/R helicase, SNF2 family protein [Brachyspira
hampsonii 30599]
gi|444504427|gb|ELV05098.1| HepA, Superfamily II D/R helicase, SNF2 family protein [Brachyspira
hampsonii 30599]
Length = 1031
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 274/546 (50%), Gaps = 87/546 (15%)
Query: 263 HSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQG 322
HSG+ LDD + D++ + P P I +Q G +WL L
Sbjct: 532 HSGIELDLDDNAVDTIANIKRVEYDETP------PKDIVGEFRSYQLVGYKWLRKLADMS 585
Query: 323 KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIRE 382
GIL DDMGLGK+ Q + + +LVVAP + +++W E+ S ++
Sbjct: 586 LNGILADDMGLGKSFQTIATILKEKENGNKLTSLVVAPTSCVANWECEIKKFAPSLEVIV 645
Query: 383 YFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
G +KTR +++ V + V + +Y +R + K+L + F +Y+ILD
Sbjct: 646 LSGN-LKTRMKKIKAV-SNYDVAVISYSTLRRDVKALSENEF------------NYLILD 691
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
E IKN +TQ AK + + S R+ +SGTPI+N++ E+W++F+F P LG +K F E
Sbjct: 692 EAQHIKNANTQNAKMVKSLKSLKRLALSGTPIENSISEMWSMFDFLMPGFLGKHKDFVED 751
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
YE PIL G D S L+ RI P+ LRRLK +V + L K+
Sbjct: 752 YEAPILAGLDS---------SSEALDNLKTRIAPFILRRLKTDVLTD--------LPPKH 794
Query: 563 EMIVWLRLTSCQRQLYEAFLNS---EIVLSA----FDGSPL---AALTILKKICDHPLLL 612
++ + LT Q++LY + L + EI + F S + +ALT L+++C HP L
Sbjct: 795 TVVSYCDLTKDQKELYMSILEAARIEIFETVKRKGFAQSHIEIFSALTRLRQVCCHPRL- 853
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
MH +D E H S K + + ++ +
Sbjct: 854 ----------------------------MH------EDLRGESH--TSGKFNMFIEMIKE 877
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIF 732
I GH+VL+FS +MLNL++ + G + +DG+TK DR+ +V+ F G+ APIF
Sbjct: 878 AISGGHSVLVFSSFTRMLNLMRIAFKKLGIDYFYLDGSTK--DRMDLVHRFNAGE-APIF 934
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LL+ + G GLTLT+AD V+ D WNP+ ++Q+ DRAYRIGQK+ V Y+L+T GT+EE
Sbjct: 935 LLSLKAAGTGLTLTQADTVMHYDLWWNPAVEDQATDRAYRIGQKRVVTNYKLITRGTIEE 994
Query: 793 KIYRKQ 798
KI Q
Sbjct: 995 KILELQ 1000
>gi|148240736|ref|YP_001226123.1| SNF2 family DNA/RNA helicase [Synechococcus sp. WH 7803]
gi|147849275|emb|CAK24826.1| Superfamily II DNA/RNA helicases, SNF2 family [Synechococcus sp. WH
7803]
Length = 1070
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 171/518 (33%), Positives = 270/518 (52%), Gaps = 85/518 (16%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR-A 355
P L P+Q GL WL LH +G L DDMGLGKT+Q+ FL L + +KR
Sbjct: 578 PEGFCGQLRPYQERGLGWLAFLHRFDQGACLADDMGLGKTIQLLAFLQHLKMEKELKRPV 637
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
L+VAP ++L++W +E A + E++G + L+ L+D ++LT+Y +++ +
Sbjct: 638 LLVAPTSVLTNWKREAAAFTPELTVLEHYGPKRPSTPAALKKALKDVDLVLTSYGLLQRD 697
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP-----SAHRIIIS 470
S+ L E+ D W ++DE IKNPS +++++ ++ S RI ++
Sbjct: 698 SELL--------ESFD----WLGTVIDEAQAIKNPSAKQSQAARDLARTRKGSRFRIALT 745
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP++N + ELWAL +F P +LG+ ++F+++Y +PI R D +L ++L
Sbjct: 746 GTPVENRVSELWALMDFLNPSVLGEEEFFRQRYRMPIERYGDMSSL-----------RDL 794
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
+ R+ P+ LRRLK D + L +K E+ W+ L+ Q+ LY E L A
Sbjct: 795 KSRVGPFILRRLKT------DKAIISDLPEKVELSEWVGLSKEQKSLYAK--TVEDTLDA 846
Query: 591 FDGSP--------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMH 642
+P L LT LK+IC+HP L AL E++A
Sbjct: 847 IARAPRGKRHGQVLGLLTRLKQICNHPAL----------------------ALKEEVA-- 882
Query: 643 IADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKG- 701
DDF ++ S K+ + +LD++I G L+F+Q + +L+Q + +
Sbjct: 883 ------SDDFLQR----SVKLQRLEEILDEVIEAGDRALLFTQFAEWGHLLQGYLQRRWR 932
Query: 702 --YKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAW 758
FL G+T +R +V+ FQE P +FLL+ + GG+GL LT+A V +D W
Sbjct: 933 SEVPFL--SGSTSKGERQAMVDRFQEDPRGPQLFLLSLKAGGVGLNLTRASHVFHIDRWW 990
Query: 759 NPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
NP+ +NQ+ DRAYRIGQ V+V++ +T G+VEEKI R
Sbjct: 991 NPAVENQATDRAYRIGQTNRVMVHKFITSGSVEEKIDR 1028
>gi|381394884|ref|ZP_09920595.1| Snf2 family protein [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379329491|dbj|GAB55728.1| Snf2 family protein [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 1077
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 270/553 (48%), Gaps = 100/553 (18%)
Query: 277 SVLEDEGSIT--------LSGPRSTYM------LPGKIGNMLFPHQREGLRWLWSLHCQG 322
S+L+D+G IT LS + LP + L +Q +G+ WL L
Sbjct: 571 SLLDDQGIITTGENKLRELSAKLQNFEEIQAVELPSNLHAELREYQHQGVNWLQFLREYE 630
Query: 323 KGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIR 381
GIL DDMGLGKT+Q + L RL + L+VAP ++L +W E+
Sbjct: 631 LAGILADDMGLGKTIQALAHLLIEKEQGRLTRPCLIVAPTSVLYNWANEVKKFTPDLSYI 690
Query: 382 EYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMIL 441
G+ RQ + + LQ +++T+Y ++ + D + + Y+IL
Sbjct: 691 VLHGS---KRQQDFE-DLQQYDLVITSYALI------------LKDIELHQNTDYYYLIL 734
Query: 442 DEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKE 501
DE H IKNP T +++L I + H++ ++GTP++N+L E WA FNF P L +K F +
Sbjct: 735 DEAHYIKNPRTSVYQAVLTIQAQHKLCLTGTPMENHLGEFWAQFNFLLPGFLSGHKQFTK 794
Query: 502 KYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKK 561
+ PI + D +DR+ L +RI+P+ LRR K ++ E L K
Sbjct: 795 LFRTPIEKHQD---IDRKVM--------LNQRIKPFLLRRTKEKIAKE--------LPGK 835
Query: 562 NEMIVWLRLTSCQRQLYEAF-------LNSEIVLSAFDGSP---LAALTILKKICDHPLL 611
++ LR+ Q +LYE L I S L AL L+++C+HP L
Sbjct: 836 TTIVQMLRIEGKQAELYETVRLAMDTRLKEIIATKGLQRSQIEILDALLKLRQVCNHPQL 895
Query: 612 LTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLD 671
L ++A+ + S K+ F++ L
Sbjct: 896 LPMQSAKAIKQ-------------------------------------SAKLEFLMETLP 918
Query: 672 KLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPI 731
++I EG VL+FSQ ML+LI+ + + F+++ G T+ +R ++V+ FQ GD P+
Sbjct: 919 EMIEEGRRVLVFSQFTSMLSLIEAELIKERISFVKLTGETR--NRQELVDKFQRGD-TPV 975
Query: 732 FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
FL++ + GG+GL LT AD VI DP WNP+ +NQ+ DRAYRIGQ K V VY+L+ ++E
Sbjct: 976 FLISLRAGGVGLNLTAADTVIHFDPWWNPAVENQATDRAYRIGQDKPVFVYKLIIENSIE 1035
Query: 792 EKIYRKQIFKGGL 804
E+I + QI K L
Sbjct: 1036 ERIQQIQINKAEL 1048
>gi|303284137|ref|XP_003061359.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226456689|gb|EEH53989.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 2006
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 267/540 (49%), Gaps = 64/540 (11%)
Query: 294 YMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIK 353
+ LP L P+Q+EG+ WL L G L DDMGLGKT+Q LA R +
Sbjct: 1402 FELPFHCNRTLRPYQQEGVNWLAFLRRFKLHGALCDDMGLGKTLQSTCILAATVVERRRE 1461
Query: 354 R-----ALVVAPKTLLSHWIKELTAVGLSA-----KIREYFGTCVKTRQYELQYVLQDKG 403
R ALVV P TL+ HW E +GL K EY G+ + +
Sbjct: 1462 RLPKLPALVVCPPTLVGHWAHE---IGLYVSEDVLKPLEYAGSPNERAALRPDIESGEYD 1518
Query: 404 VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPS 463
V++ +YD +R + + L + S Y ILDEGH I+NP + +++ +I +
Sbjct: 1519 VVIMSYDALRQDVEYLTTNKSFS-----------YCILDEGHAIRNPKARITQAVKKIRA 1567
Query: 464 AHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIG 523
HR+++SGTPIQN++ ELW+LF+F P LG + FK Y + R G
Sbjct: 1568 EHRLLLSGTPIQNDVVELWSLFDFLMPGFLGTEREFKTSYGIAGARSAAAKKGGGLTEAG 1627
Query: 524 SAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF-- 581
+ L +++ P+ LRR K+EV + L K V++ L+ Q++LY+AF
Sbjct: 1628 ALTMGALHKQVMPFVLRRTKDEVLKD--------LPPKIIQDVYVDLSVNQKKLYDAFEG 1679
Query: 582 --LNSEI-------------VLSAFDGSPLAALTILKKICDHPLLLT--KRAAEDVLDGM 624
+ SEI + AL L+K+C HP L+ K+A +
Sbjct: 1680 SSVKSEIETAVSGGGGGADGDGAGATSHVFQALQYLRKLCSHPRLVNGGKKAVGGKVSAE 1739
Query: 625 DSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFS 684
D+ +P+ AL K + A + D + + F + GH VLIF+
Sbjct: 1740 DA--SPKFVAL--KQILLDAGIGRDPDVEREDQETG---GFAKKESES---SGHRVLIFT 1789
Query: 685 QTRKMLNLIQESI-GS--KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGL 741
Q + +L+L++E + G+ +G +LR+DG+ + R +V F + LLT+ VGGL
Sbjct: 1790 QLKGLLDLVEEELFGTMMRGVSWLRLDGSVPPTRRFDVVRKFNADPSIDVLLLTTHVGGL 1849
Query: 742 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
GL LT AD V+ ++ WNP D Q++DRA+R+GQKK V VYRL+T GT+EEKI Q FK
Sbjct: 1850 GLNLTSADTVVFLEHDWNPQKDLQAMDRAHRLGQKKTVNVYRLLTKGTMEEKIMGLQRFK 1909
>gi|413946713|gb|AFW79362.1| hypothetical protein ZEAMMB73_340618 [Zea mays]
Length = 2031
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 269/528 (50%), Gaps = 65/528 (12%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG-LFHSRL-----IKRALVVAP 360
+Q+EG+ WL L GIL DDMGLGKT+Q +A + +R I +L++ P
Sbjct: 1455 YQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVASDIAEARARNDEKILTSLIICP 1514
Query: 361 KTLLSHWIKELTAVGLSAKIR--EYFGTCVKTRQYELQYVLQDK-GVLLTTYDIVRNNSK 417
TL++HW E+ S+ ++ +Y G+ Q+ DK V++T+YDI+R +
Sbjct: 1515 STLVAHWEYEIEKYIDSSILKPLQYVGSSQDRVTLRSQF---DKVNVIITSYDIIRKDID 1571
Query: 418 SLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNN 477
L + W+Y +LDEGH+IKN ++ ++ ++ + HR+I+SGTPIQNN
Sbjct: 1572 FL------------GNITWNYCVLDEGHIIKNSRSKITFAVKQLKAQHRLILSGTPIQNN 1619
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
+ ELW+LF+F P LG K F+ Y P+L D ++ G + L +++ P+
Sbjct: 1620 VLELWSLFDFLMPGFLGTEKQFQAAYGKPLLAAKDSKCSAKDAEAGILAMEALHKQVMPF 1679
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIV---WLRLTSCQRQLYEAFLNSE-------IV 587
LRR K+EV LS E I+ + L+ Q +LY+ F +S IV
Sbjct: 1680 LLRRTKDEV-----------LSDLPEKIIQDRYCDLSLLQLKLYDKFSSSNAKDEISTIV 1728
Query: 588 ----LSAFDGSPLA------ALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAE 637
L P A AL L K+C HPLL+T + L + + + +
Sbjct: 1729 KANELEESAPQPKATRHVFQALQYLLKLCSHPLLVTGENPPNHLVDLLNEIGLGSGSELH 1788
Query: 638 KLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEG-HNVLIFSQTRKMLNLIQES 696
+L VA ++ QE C I +S D G H VLIF+Q + L++I++
Sbjct: 1789 ELHHSPKLVALQEILQE------CGIGSEISSPDASTAVGQHRVLIFAQHKAFLDIIEKD 1842
Query: 697 IGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIV 753
+ + +LR+DG+ R +IV F + LLT+ VGGLGL LT AD ++
Sbjct: 1843 LFQSHMRSVTYLRLDGSVDPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVF 1902
Query: 754 VDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
V+ WNP D Q++DRA+R+GQ+K V V+RL+ GT+EEK+ Q FK
Sbjct: 1903 VEHDWNPMKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFK 1950
>gi|210075373|ref|XP_501321.2| YALI0C01243p [Yarrowia lipolytica]
gi|199425214|emb|CAG81616.2| YALI0C01243p [Yarrowia lipolytica CLIB122]
Length = 1235
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 274/543 (50%), Gaps = 80/543 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH-SRLIKRALVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L R + LV+
Sbjct: 439 VGGQLKEYQLKGLQWMVSLYNNSLNGILADEMGLGKTIQSISLITYLIEVKRQTRPYLVI 498
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S K + G+ + ++ Q D VLLTTY+ +
Sbjct: 499 VPLSTLTNWTNEFEKWAPSVKKIVFKGSPNQRKELSNQVRAGDFQVLLTTYEYI------ 552
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIP-SAHRIIISGTPIQNN 477
I D+A W +MI+DEGH +KN ++ A++L + S +R+I++GTP+QNN
Sbjct: 553 ------IKDKALLGRIRWVHMIIDEGHRMKNTQSKLAQTLTQFYYSRYRLILTGTPLQNN 606
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P++ K F E + P + ++ + V + L + ++P+
Sbjct: 607 LPELWALLNFVLPKIFNSVKTFDEWFNTPFANSGSQDKMELTEEETLLVIRRLHKVLRPF 666
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLA 597
LRRLK +V E D L K E ++ ++++ Q ++Y+ L + D
Sbjct: 667 LLRRLKKDV--EKD------LPDKVETVIKCKMSALQLKMYQQMLKYNALYVGDDSGAAG 718
Query: 598 A-----------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
+ L+KIC+HP V + ++++LNP
Sbjct: 719 VNKSGVKGLNNKIMQLRKICNHPY---------VYEEVETLLNPSHG------------- 756
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGY 702
++++ + + LLD+++P+ H VL+F Q ++++++++ + +G
Sbjct: 757 ---------NNDLLWRSAGKFELLDRILPKFKARDHRVLMFFQMTQIMDIMEDYLRLRGL 807
Query: 703 KFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNP 760
++LR+DG TKA DR +++ F D +P FLL+++ GGLGL L AD VI+ D WNP
Sbjct: 808 QYLRLDGNTKADDRSEMLKLFNAPD-SPYFCFLLSTRAGGLGLNLQTADTVIIYDTDWNP 866
Query: 761 STDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRK---------QIFKGGLFKTATEH 811
D Q+ DRA+RIGQ K+V + RL+T +VEE I ++ ++ + G F +
Sbjct: 867 HQDLQAQDRAHRIGQTKEVRILRLITEDSVEEVILQRAHAKLEIDGKVIQAGKFDNKSTA 926
Query: 812 KEQ 814
+EQ
Sbjct: 927 EEQ 929
>gi|429125222|ref|ZP_19185754.1| HepA, Superfamily II D/R helicase, SNF2 family protein [Brachyspira
hampsonii 30446]
gi|426278875|gb|EKV55904.1| HepA, Superfamily II D/R helicase, SNF2 family protein [Brachyspira
hampsonii 30446]
Length = 1031
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 274/546 (50%), Gaps = 87/546 (15%)
Query: 263 HSGLVNVLDDYSDDSVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQG 322
HSG+ LDD + D++ + P P I +Q G +WL L
Sbjct: 532 HSGIELDLDDNAVDTIANIKRVEYDETP------PKDIVGEFRSYQLVGYKWLRKLADMS 585
Query: 323 KGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIRE 382
GIL DDMGLGK+ Q + + +LVVAP + +++W E+ S ++
Sbjct: 586 LNGILADDMGLGKSFQTIATILKEKENGNKLTSLVVAPTSCVANWECEIKKFAPSLEVIV 645
Query: 383 YFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILD 442
G +KTR +++ V + V + +Y +R + K+L + F +Y+ILD
Sbjct: 646 LSGN-LKTRMKKIKAV-SNYDVAVISYSTLRRDVKALSENEF------------NYLILD 691
Query: 443 EGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEK 502
E IKN +TQ AK + + S R+ +SGTPI+N++ E+W++F+F P LG +K F E
Sbjct: 692 EAQHIKNANTQNAKMVKSLKSLKRLALSGTPIENSISEMWSMFDFLMPGFLGKHKDFIED 751
Query: 503 YELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKN 562
YE PIL G D S L+ RI P+ LRRLK +V + L K+
Sbjct: 752 YEAPILAGLDS---------SSEALDNLKTRIAPFILRRLKTDVLTD--------LPPKH 794
Query: 563 EMIVWLRLTSCQRQLYEAFLNS---EIVLSA----FDGSPL---AALTILKKICDHPLLL 612
++ + LT Q++LY + L + EI + F S + +ALT L+++C HP L
Sbjct: 795 TVVSYCDLTKDQKELYMSILEAARIEIFETVKRKGFAQSHIEIFSALTRLRQVCCHPRL- 853
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
MH +D E H S K + + ++ +
Sbjct: 854 ----------------------------MH------EDLRGESH--TSGKFNMFIEMIKE 877
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIF 732
I GH+VL+FS +MLNL++ + G + +DG+TK DR+ +V+ F G+ APIF
Sbjct: 878 AISGGHSVLVFSSFTRMLNLMRIAFKKLGIDYFYLDGSTK--DRMDLVHRFNAGE-APIF 934
Query: 733 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEE 792
LL+ + G GLTLT+AD V+ D WNP+ ++Q+ DRAYRIGQK+ V Y+L+T GT+EE
Sbjct: 935 LLSLKAAGTGLTLTQADTVMHYDLWWNPAVEDQATDRAYRIGQKRVVTNYKLITRGTIEE 994
Query: 793 KIYRKQ 798
KI Q
Sbjct: 995 KILELQ 1000
>gi|71988744|ref|NP_499301.2| Protein M03C11.8 [Caenorhabditis elegans]
gi|426021006|sp|G5EDG2.1|SMRCD_CAEEL RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A containing DEAD/H box
1 homolog
gi|31043816|emb|CAA88960.2| Protein M03C11.8 [Caenorhabditis elegans]
Length = 989
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 290/557 (52%), Gaps = 61/557 (10%)
Query: 266 LVNVLDDYSDD--SVLEDEGSITLSGPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGK 323
L +LDD D +V +D T GP +L K G L +Q G++WL ++ +
Sbjct: 357 LSRILDDCKDHAHTVTKDFERCT-EGPLQLPLL--KEGCTLHDYQLIGVKWLIMMYNKDL 413
Query: 324 GGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREY 383
ILGD+MGLGKT+QI FL+ L L+V P + + +WI E S ++ Y
Sbjct: 414 NAILGDEMGLGKTIQIVAFLSYLKQIGKTGPHLIVVPSSTIENWIGEFHKWCPSIQLLTY 473
Query: 384 FGTCVKTRQYELQYVLQDKG---VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMI 440
+G+ R++ V + K V+LTTY++V + S D+ + +Y+I
Sbjct: 474 YGS-QDERKHLRHRVKKQKDHIDVILTTYNMVTSKS---------DDKKFFKNFSLNYVI 523
Query: 441 LDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFK 500
DEGH++KN ++R + L+++ +I+++GTP+QNNL EL +L F ++ NK+ +
Sbjct: 524 YDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIELISLMYFVLSKVF--NKYCE 581
Query: 501 EKYEL--------PILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDV 552
+ L P L +K AL ++ RI A A +QPY LRRLKN+V
Sbjct: 582 DITHLLQHFKQLGPALDTKNK-ALYQQDRIEEAKAI-----LQPYILRRLKNQVL----- 630
Query: 553 TSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTILKKICDHPLLL 612
+L K+E I+ + + Q+QLY+ + + + S G +L L++ +HPLL
Sbjct: 631 ---GSLPSKSEQIIEVEMKKPQKQLYDNIVEA-LQQSEESGDSYGSLMRLRQAANHPLLR 686
Query: 613 TKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA-DVAEKDDFQEQH--DNISCKISFILS- 668
+ LD + ML + A A+K H++ D+A D + + C F+L+
Sbjct: 687 RSEYTDQKLDKIAKMLCLREKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNE 746
Query: 669 ----------LLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKAS 714
LD ++PE G VLIFSQ ML++++ + +GY + R+DG T
Sbjct: 747 QLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVL 806
Query: 715 DRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIG 774
DR +++N+F +FLL+++ GGLG+ LT A+ +I+ D +NP D Q+ DR +R+G
Sbjct: 807 DRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMG 866
Query: 775 QKKDVVVYRLMTCGTVE 791
Q+K V V RL++ GTVE
Sbjct: 867 QEKPVHVTRLVSKGTVE 883
>gi|395212968|ref|ZP_10400046.1| DNA/RNA helicase [Pontibacter sp. BAB1700]
gi|394456935|gb|EJF11153.1| DNA/RNA helicase [Pontibacter sp. BAB1700]
Length = 976
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 265/524 (50%), Gaps = 88/524 (16%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA 355
+P + L P+Q +GL WL L GG L DDMGLGKT+QI F+ L R +
Sbjct: 505 IPAGLQTTLRPYQWQGLSWLNFLDDLQFGGCLADDMGLGKTVQIIAFILLLREKRERQTH 564
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
L+V P +L+S+W EL G S ++ + G + + Q+ V++TTY+
Sbjct: 565 LLVVPTSLISNWQAELQRFGPSLQVHVHHGP----NRAKDTAAFQEYDVVITTYN----- 615
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
+ +SD ++ Y LDE IKNP++QR K+ + S +R++++GTP +
Sbjct: 616 -------TLLSDIVFLKKYLFGYTFLDESQNIKNPNSQRYKAACLLQSYNRVVLTGTPFE 668
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
NN +++A +F P LLG +F+ Y +PI + D+ + A+ L+E+I
Sbjct: 669 NNTFDIYAQLSFVNPGLLGTRTYFRNTYSMPIDKFKDRRS-----------AQALQEKIG 717
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEA-------FLNS--EI 586
P+ LRR K EV E L K EMI++ + QR++Y+ ++N+ E
Sbjct: 718 PFVLRRTKAEVARE--------LPDKTEMILYCEMGEEQRKVYDTAEQEFRDYINASGEE 769
Query: 587 VLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADV 646
L+ L +T L++IC+ PLL+ D+ L + +A + L I +V
Sbjct: 770 ELTKHPMHVLRGITKLRQICNSPLLIG-----------DAKLFTDTSAKIQVLMQQIQNV 818
Query: 647 AEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLR 706
A H VL+FSQ ML+LI+E + + K+
Sbjct: 819 ARH----------------------------HKVLVFSQFVGMLDLIKEELIKENIKYSY 850
Query: 707 IDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
+ G+T+ +R ++V+ FQ + +FL++ + GG GL LT AD V +VDP WNP+ +NQ+
Sbjct: 851 LTGSTR--NRGEVVDQFQADEEIRVFLVSLKAGGTGLNLTAADYVFLVDPWWNPAVENQA 908
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE 810
+DR+YRIGQ K V+ RL+ TVEEKI QI + K AT+
Sbjct: 909 IDRSYRIGQAKKVIAVRLICPNTVEEKI---QILQQNKSKLATD 949
>gi|389685508|ref|ZP_10176832.1| SNF2 family domain/helicase domain protein [Pseudomonas
chlororaphis O6]
gi|388551161|gb|EIM14430.1| SNF2 family domain/helicase domain protein [Pseudomonas
chlororaphis O6]
Length = 897
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 255/503 (50%), Gaps = 65/503 (12%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKRA 355
P + L P+Q EGL W+ SL GGIL DDMGLGKT+Q + L+ RL +
Sbjct: 419 PEGLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHVLSEKNAGRLDRPC 478
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
+VV P +L+ +W+ E ++ +G K L D ++LTTY ++ +
Sbjct: 479 MVVMPTSLIPNWLDEAAHFTPQLRVLALYGAGRKKHFARLA----DYDLILTTYALLPKD 534
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
+ L ++LDE IKNPS++ A++ + + R+ +SGTP++
Sbjct: 535 VEQLAALPL------------HVLVLDEAQYIKNPSSKAAQAARALNARQRLCLSGTPLE 582
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
N+L ELW+LF+F P LGD K F Y +PI +KHA E R+ + L RI+
Sbjct: 583 NHLGELWSLFHFLLPGWLGDVKSFNRDYRVPI----EKHA--SEVRL-----QHLNGRIK 631
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 632 PFLLRRTKEQVATE--------LPPKTEIIHWVELNEAQRDVYETM-------------- 669
Query: 596 LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQ 655
L + KK+ D + K A + ++++L +L +D
Sbjct: 670 --RLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLV--------NEDAVPT 717
Query: 656 HDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASD 715
+ S K+ ++ +L++L EG +L+FSQ ML+LI+ + + + + G T+ D
Sbjct: 718 RGSSSGKLDSLMEMLEELFDEGRRILLFSQFTSMLSLIEAELKRRNVAYALLTGQTR--D 775
Query: 716 RVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ 775
R V DFQ G + IFL++ + GG+GL LT+AD VI DP WNP+T+NQ+ DRAYRIGQ
Sbjct: 776 RRTPVRDFQSGKLQ-IFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAYRIGQ 834
Query: 776 KKDVVVYRLMTCGTVEEKIYRKQ 798
+K V VY+L+ GTVEEKI Q
Sbjct: 835 EKPVFVYKLIARGTVEEKIQHLQ 857
>gi|307177261|gb|EFN66439.1| DNA repair and recombination protein RAD54B [Camponotus floridanus]
Length = 845
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 176/564 (31%), Positives = 287/564 (50%), Gaps = 62/564 (10%)
Query: 307 HQREGLRWLWSLHCQGK-----GGILGDDMGLGKTMQICGFL-----AGLFHSRLIKRAL 356
HQR G+ +L+ K G IL D+MGLGKT+Q + G + +++R L
Sbjct: 266 HQRYGIVFLYECLMGLKVPDYFGAILADEMGLGKTLQCITLIWTMLKKGPYGKPIVRRVL 325
Query: 357 VVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG-VLLTTYDIVRNN 415
++ P++L ++W KE +I Y V + ++ + VL+ +Y+++ +
Sbjct: 326 IITPRSLCNNWDKEFRKWLGCHRISPYV---VDGKNRPKDFIKHPRNSVLIISYEMLVKS 382
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
++ +F D ++ DEGH +KN + + AK L EI RI+++GTPIQ
Sbjct: 383 HVEIKEITF------------DLLVCDEGHRLKNSNIKAAKLLHEINCKKRIMLTGTPIQ 430
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
N+LKE + L +F P +LG +K YE PI+ +A +GS A EL ER +
Sbjct: 431 NDLKEFYTLVDFVNPGILGSPLEYKNYYEDPIVASQCPNADKNVLSLGSERATELHERTK 490
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY----EAFLNSEIVLSAF 591
+ LRR +N T + L K E++++ LTS Q LY +A+ N + L
Sbjct: 491 SFILRRTQN--------TINKYLPCKYEIVLFCSLTSEQMDLYSLVTDAWFN-KTCLQDK 541
Query: 592 DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
+ + L+ + LKKIC+HP L +N ++ L E L+ I + K D
Sbjct: 542 NHTHLSIIIALKKICNHPNLF---------------INDKENTLRETLSKAICTIQLKQD 586
Query: 652 FQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTT 711
+ KI+ + L+ L +++ S + L+L + + KFLR+DGT
Sbjct: 587 --KNFIKYCGKITILQVLMRNLKKTDEKLVLVSYYTQTLDLFETICNIEELKFLRLDGTI 644
Query: 712 KASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 770
+S R KI+ F D + I LL+++ GG+GL L A R+++ D WNP++D Q++ R
Sbjct: 645 SSSTRSKIIEQFNTRSDNSKILLLSAKAGGVGLNLPGASRLVLFDSDWNPASDVQAMARI 704
Query: 771 YRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE--HKEQIRYFSQQDLRELLS 828
+R GQKK+V +YRL+T GT+EEKIY++QI K L ++ + H ++ S +L++L +
Sbjct: 705 WRDGQKKNVYIYRLLTTGTIEEKIYQRQISKASLSESVVDLNHLGSLK-LSTAELKDLFT 763
Query: 829 LPKQGFDVSLTQQQLHEEHGDQHN 852
L +SLT L+ DQ N
Sbjct: 764 LATDT--ISLTHDLLNCSCTDQDN 785
>gi|302823829|ref|XP_002993563.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
gi|300138630|gb|EFJ05392.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
Length = 852
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 191/634 (30%), Positives = 302/634 (47%), Gaps = 91/634 (14%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSL-----------HCQGKGGILGDDMGLGKTMQIC 340
+T ++ + L PHQREG+++++ G IL DDMGLGKT+Q
Sbjct: 139 ATIVVDPIVAKFLRPHQREGVQFMFECVTGLREFSKAGDAAWSGCILADDMGLGKTLQSI 198
Query: 341 GFLAGLFH-----SRLIKRALVVAPKTLLSHWIKELTA-VGLSAKIREYFGTCVKTRQYE 394
L L S + KR ++V P +L+S+W E+ +G A + C +R
Sbjct: 199 TLLWTLLRQGFQGSPIAKRIIIVTPTSLVSNWESEIKKWLGGRASV---IAICEASRAE- 254
Query: 395 LQYVLQDKGVLLTTYD-----IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKN 449
VLQD L+ + I+ + L F + A D +I DE H +KN
Sbjct: 255 ---VLQDVASFLSPRNAFQILIISYETFRLHAGKFQKEGACD------LLICDEAHRLKN 305
Query: 450 PSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILR 509
T ++L + R+++SGTP+QN+L+E +A+ NF P +LGD F+ Y+ PILR
Sbjct: 306 DHTLTNQALASLQCHRRVLLSGTPMQNDLEEFYAMVNFTNPGILGDVAAFRRYYQNPILR 365
Query: 510 GNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLR 569
G + A + +++G + EL E++ + LRR + S L K +V +
Sbjct: 366 GREPEATEEARKLGLERSAELSEKVNQFILRR--------TNALLSNHLPPKIVEVVCCK 417
Query: 570 LTSCQRQLYEAFLNSEIVLSAFD-----GSPLAALTILKKICDHPLLL--TKRAAEDVLD 622
LT+ QR+LY F++S+ V A LA++T LKK+C HP L+ T RA
Sbjct: 418 LTNLQRELYTHFIHSKNVRLALQDKAKRARVLASITALKKLCSHPKLIYDTVRAGGSEAA 477
Query: 623 GMDSMLN--PEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN- 679
G ++ + P++ MH D +S K+ + LL+ L + ++
Sbjct: 478 GFENCMQFFPKE--------MHTGRGTPSDG---SWVKLSGKMFVLARLLENLRKKTNDR 526
Query: 680 VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIV---NDFQEGDVAPIFLLTS 736
+++ S + L+L + + Y ++R+DG+T R K+V ND + + A FLL+S
Sbjct: 527 IVLVSNYTQTLDLFAQLCRERNYPYVRLDGSTSIGKRQKLVQKFNDPSQNEFA--FLLSS 584
Query: 737 QVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 796
+ GG GL L +R+++ DP WNP+ D Q+ R +R GQKK V +YR + GT+EEK+Y+
Sbjct: 585 KAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLATGTIEEKVYQ 644
Query: 797 KQIFKGGLFKTATEHKE-----------------QIRYFSQQDLRELLSLPKQGFDVSLT 839
+QI K GL K + + Q+ S +DLR+L +L D T
Sbjct: 645 RQISKEGLQKVISGDSKAEVRKLIKFLKRVVVLFQVNALSTEDLRDLFTLRDISSD---T 701
Query: 840 QQQLHEEHGDQHNMDESLEAHIQFLDTLGIAGVS 873
L E D N+ L Q D AG +
Sbjct: 702 HDTLDCERCDVENVPNELAN--QLGDIGAFAGTA 733
>gi|332019859|gb|EGI60320.1| DNA repair and recombination protein RAD54B [Acromyrmex echinatior]
Length = 857
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 177/577 (30%), Positives = 292/577 (50%), Gaps = 74/577 (12%)
Query: 307 HQREGLRWLWSLHCQGK-----GGILGDDMGLGKTMQICGFL-----AGLFHSRLIKRAL 356
HQR G+ +L+ K G IL D+MGLGKT+Q + G + +IKR L
Sbjct: 281 HQRHGIVFLYECLMGLKVPNYFGAILADEMGLGKTLQCITLIWTMLKKGPYGKPIIKRVL 340
Query: 357 VVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNS 416
+V P +L ++W KE ++ G R YV+ K RN+
Sbjct: 341 IVTPSSLCNNWEKEFV---------KWLG-----RHRIFPYVIGGKNKPKDFIKYPRNSI 386
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQN 476
+ FI ++ +D ++ DEGH +KN + + AK L EI RI+++GTPIQN
Sbjct: 387 MIISYEMFIKCHTEINEMTFDLIVCDEGHRLKNSNIKAAKMLNEINCKKRIVLTGTPIQN 446
Query: 477 NLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQP 536
+LKE +AL +F P +LG +K YE PI+ A D +G+ + EL + +
Sbjct: 447 DLKEFYALIDFVNPGILGTPNEYKSYYEEPIIAAQYSSADDDVLSLGNERSAELYKHTKS 506
Query: 537 YFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLY----EAFLNSEIVLSAFD 592
+ LRR + + + L K E++++ LT Q+ LY +A+ N +I L
Sbjct: 507 FILRRSQKAI--------NKYLPYKYEIVLFCSLTKKQKDLYSLITDAWFN-KICLEDKS 557
Query: 593 GSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAM--HIADVAEKD 650
L+ +T LKKIC+HP L LN E+ AL + L+ +++ + +
Sbjct: 558 NIHLSIITALKKICNHPNLF---------------LNEEEKALYDVLSKVSYLSQIKRDE 602
Query: 651 DFQEQHDNISC-KISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDG 709
+F E C K++ + +L+ L +++ S + L+L++ + KFLR+DG
Sbjct: 603 NFTEY-----CGKVTIVQTLMRNLKKTDEKLVLVSYYTQTLDLLETICNMERLKFLRLDG 657
Query: 710 TTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
T ++ R+KI F + D + + LL+++ GG+GL L A R+++ D WNP++D Q++
Sbjct: 658 ATSSTIRLKITEQFNTQTDNSKVLLLSAKAGGVGLNLPGASRLVLFDSDWNPASDMQAMA 717
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRY-----FSQQDL 823
R +R GQK++V +YRL+T GT+EEKIY++QI K L +T + + Y S +L
Sbjct: 718 RIWRDGQKRNVYIYRLLTTGTIEEKIYQRQISKANLSETVVD----LNYLGSLKLSTAEL 773
Query: 824 RELLSLPKQGFDVSLTQQQLHEEHGD--QHNMDESLE 858
++L +L +SLT ++ D +H + E L+
Sbjct: 774 KDLFTLASDT--MSLTHDLINCSCSDKNEHILSEELK 808
>gi|344297689|ref|XP_003420529.1| PREDICTED: probable global transcription activator SNF2L2 [Loxodonta
africana]
Length = 1573
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 262/545 (48%), Gaps = 70/545 (12%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF-HSRLIKRALVV 358
I L +Q +GL W+ SL+ GIL D+MGLGKT+Q + L H RL L++
Sbjct: 703 INGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLII 762
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + LS+W E S Y GT R Q VLLTTY+ +
Sbjct: 763 VPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYI------ 816
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRIIISGTPIQNN 477
I D+ W YMI+DEGH +KN + + L + R++++GTP+QN
Sbjct: 817 ------IKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRVLLTGTPLQNK 870
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPY 537
L ELWAL NF P + F++ + P ++ L+ E+ I + + L + ++P+
Sbjct: 871 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETI--LIIRRLHKVLRPF 928
Query: 538 FLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP-- 595
LRRLK EV + L +K E ++ +++ Q+ LY I+L+ DGS
Sbjct: 929 LLRRLKKEV--------ESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLT--DGSEKD 978
Query: 596 ----------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
+ + L+KIC+HP + + E A H+
Sbjct: 979 KKGKGGAKTLMNTIMQLRKICNHPYMFQH--------------------IEESFAEHLGY 1018
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
+ + E + S K + +L KL GH VL+F Q ++ ++++ + + +L
Sbjct: 1019 SSGVINGAELY-RASGKFELLDRILPKLRATGHRVLLFCQMTSLMTIMEDYFAFRNFLYL 1077
Query: 706 RIDGTTKASDRVKIVNDFQE-GDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
R+DGTTK+ DR ++ F E G IFLL+++ GGLGL L AD V++ D WNP D
Sbjct: 1078 RLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDL 1137
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKGGLFKTATEHKEQI 815
Q+ DRA+RIGQ+ +V V RL T +VEEKI Y+ +++ + G+F + E+
Sbjct: 1138 QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHER- 1196
Query: 816 RYFSQ 820
R F Q
Sbjct: 1197 RAFLQ 1201
>gi|224094755|ref|XP_002310223.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222853126|gb|EEE90673.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 754
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 261/522 (50%), Gaps = 63/522 (12%)
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR 354
++P G L +Q +G++WL SL G GIL D MGLGKT+Q GFLA L + L
Sbjct: 175 LVPLLTGGRLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLIGNGLNGP 234
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG----VLLTTYD 410
LV+AP + LS+W+ E++ S Y G + + +++ + G +++T+Y+
Sbjct: 235 YLVIAPLSTLSNWVNEISRFVPSMDAIIYHGNKKQRDEIRRKHMPRSIGPKFPIIVTSYE 294
Query: 411 IVRNNSKS-LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
I +++K LR W Y+++DEGH +KN + K L + +++I+
Sbjct: 295 IALSDAKKHLRHYP------------WKYLVVDEGHRLKNSKCKLLKELKYLCVDNKLIL 342
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
+GTP+QNNL ELW+L NF P++ ++ F+ ++L N+ + E+R + V +
Sbjct: 343 TGTPLQNNLAELWSLLNFILPDIFQSHEEFESWFDLSGKCSNEAMKEEVEERRRAQVVVK 402
Query: 530 LRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI--- 586
L ++P+ LRRLKN+V L +K E+I++ LT Q++ + +N +
Sbjct: 403 LHAILRPFLLRRLKNDV--------EQMLPRKKEIILYATLTEHQKKFQDHLINKTLEGY 454
Query: 587 ------VLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLA 640
G + L+K C HP LL E DG S P + E+
Sbjct: 455 LREKMDTGRGMKGRLTNLMVQLRKNCYHPDLL-----ESAFDG--SYFYPPVEQIVEQCG 507
Query: 641 MHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSK 700
K + LL++L H VLIFSQ K+L+++ K
Sbjct: 508 ---------------------KFRLLDKLLNRLFALKHKVLIFSQWTKVLDIMDYYFSEK 546
Query: 701 GYKFLRIDGTTKASDRVKIVNDFQ-EGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
G++ RIDG+ +R + + +F E +FLL+++ GGLG+ LT AD I+ D WN
Sbjct: 547 GFEVCRIDGSVNLDERKRQIEEFNDENSQYRVFLLSTRAGGLGINLTSADTCILYDSDWN 606
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
P D Q++DR +RIGQ K V VYRL T ++E +I ++ K
Sbjct: 607 PQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRILKRAFSK 648
>gi|451853165|gb|EMD66459.1| hypothetical protein COCSADRAFT_298475 [Cochliobolus sativus
ND90Pr]
Length = 812
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 179/566 (31%), Positives = 286/566 (50%), Gaps = 64/566 (11%)
Query: 290 PRSTYMLPGKIGNMLFPHQREGLRWLWS-----LHCQGKGGILGDDMGLGKTMQICGFLA 344
PR ++ ++ +L PHQ EG+++L+ + + G I+ D+MGLGKT+Q +
Sbjct: 202 PRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCITLMW 261
Query: 345 GLFHSR------LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL--- 395
L I++ ++ P +L+ +W EL L F K + EL
Sbjct: 262 TLLKQSPDAGKSTIQKCVIACPSSLVRNWANELVK-WLGKDAVTPFAIDGKASKEELIQQ 320
Query: 396 --QYVLQD-----KGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIK 448
Q+ + + VL+ +Y+ +R DE G M+ DEGH +K
Sbjct: 321 IRQWSIASGRAVVRPVLIVSYETLR----------LYVDEFGQTPI--GLMLCDEGHRLK 368
Query: 449 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPIL 508
N + +L + R+I+SGTPIQN+L E +AL NF P LG F++++E+PIL
Sbjct: 369 NGDSLTFTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPGYLGTRMEFRKQFEIPIL 428
Query: 509 RGNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWL 568
+G D + D + + G+ EL + + +RR N++ S L K E +V+
Sbjct: 429 KGRDANGTDADVQKGTERLTELLGLVNKFIIRR-TNDIL-------SKYLPVKYEHVVFC 480
Query: 569 RLTSCQRQLYEAFLNSEIVLSAFDG---SPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
L Q+ LY F+ S V S G PL + +LKK+C+HP LL ED L G +
Sbjct: 481 NLAPFQKDLYNHFIKSPDVQSLLRGKGSQPLKVIGMLKKLCNHPDLLN--LPED-LPGCE 537
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN-VLIFS 684
L PED +K D +D +E S K++ + +L ++ E ++ +++ S
Sbjct: 538 DKL-PED--FVQK------DARGRD--REVKVWYSGKMAVLDRMLARIRAETNDKIVLIS 586
Query: 685 QTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLG 742
+ L++ S+GY R+DGT S R K+V+ F + + +P +FLL+S+ GG G
Sbjct: 587 NYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLVDKFNDPE-SPEFVFLLSSKAGGCG 645
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
L L A+R+++ DP WNP+ D Q++ R +R GQKKD VYR +T GT+EEK++++Q K
Sbjct: 646 LNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQ 705
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELL 827
L + E + R+FS LREL
Sbjct: 706 SLSSCVVDSAEDVERHFSLDSLRELF 731
>gi|356495411|ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
Length = 943
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 275/552 (49%), Gaps = 69/552 (12%)
Query: 295 MLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKR 354
++P G L +Q +G++WL SL G GIL D MGLGKT+Q GFL+ L L
Sbjct: 363 LMPLLTGGKLKNYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKAKGLDGP 422
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTC-----VKTRQYELQYVLQDKGVLLTTY 409
+++AP + LS+W+ E++ S Y G ++ + + + +++T+Y
Sbjct: 423 YMIIAPLSTLSNWVNEISRFAPSLPAVIYHGDKKQRDDIRRKHMPTRTIGPQFPIVITSY 482
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 469
+I N++K S W Y+++DEGH +KN + K+L I +++++
Sbjct: 483 EIALNDAKKYFRSYN-----------WKYLVVDEGHRLKNSQCKLVKALKFINVENKLLL 531
Query: 470 SGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKE 529
+GTP+QNNL ELW+L NF P++ + F+ + L N + E++ S V +
Sbjct: 532 TGTPLQNNLAELWSLLNFILPDIFASLEEFESWFNLSGKSNNGATKEELEEKRRSQVVAK 591
Query: 530 LRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI--- 586
L ++P+ LRR+K++V L +K E+I++ +T Q+ L + +N +
Sbjct: 592 LHAILRPFLLRRMKSDV--------EIMLPRKKEIIIYANMTEHQKNLQDHLVNKTLGNY 643
Query: 587 ---VLSAFDGSP---LAALTI-LKKICDHPLLLTKRAAEDVLDGMDSMLNPE-DAALAEK 638
+S+ P + L I L+K+C+HP LL E D DS L P + + +
Sbjct: 644 LKENMSSGRSVPAGMIRNLAIQLRKVCNHPDLL-----ESAFD--DSYLYPPLEEIVGQC 696
Query: 639 LAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIG 698
H+ D LL +L H VLIFSQ K+L+++
Sbjct: 697 GKFHLLD----------------------RLLQRLFARNHKVLIFSQWTKVLDIMDYYFS 734
Query: 699 SKGYKFLRIDGTTKASDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRVIVVDPA 757
KG++ RIDG K +R + + DF + + +FLL+++ GGLG+ LT AD I+ D
Sbjct: 735 EKGFEVCRIDGGVKLDERKQQIQDFNDVNSNCRVFLLSTRAGGLGINLTAADTCILYDSD 794
Query: 758 WNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATE----HKE 813
WNP D Q++DR +RIGQ K V VYRL T ++E ++ ++ K L E H+E
Sbjct: 795 WNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIEGRMLKRAFSKLKLEHVVIEKGQFHQE 854
Query: 814 QIRYFSQQDLRE 825
+ + S ++ E
Sbjct: 855 RTKPASMDEIEE 866
>gi|402592151|gb|EJW86080.1| smarca2 protein [Wuchereria bancrofti]
Length = 1399
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 254/500 (50%), Gaps = 58/500 (11%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH-SRLIKRALVVAPKT 362
L P+Q +GL W+ SL+ GIL D+MGLGKT+Q + L +L L++ P +
Sbjct: 574 LKPYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTIALVTYLMEVKKLNGPYLIIVPLS 633
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGS 422
+++W EL Y G ++ E VLLTTYD V K L G
Sbjct: 634 TIANWSLELEKWAPHVVSIVYKGNKEARKKLEASIRRNAFNVLLTTYDYVLK-EKGLLGK 692
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPIQNNLKEL 481
W YMI+DEGH +KN + + L SA HR++++GTP+QN L EL
Sbjct: 693 -----------IRWKYMIIDEGHRMKNHNCKLTLVLNGYFSAQHRLLLTGTPLQNKLPEL 741
Query: 482 WALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRR 541
WAL NF P + F++ + P +K L++E+ + + + L + ++P+ LRR
Sbjct: 742 WALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEETM--LIIRRLHKVLRPFLLRR 799
Query: 542 LKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTI 601
LK EV + L +K E ++ +++ QR LY+ ++ S G T+
Sbjct: 800 LKKEV--------ESQLPEKTEYVIKCDMSALQRILYQHMQKGLLIDSKHAGGRALMNTV 851
Query: 602 --LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNI 659
L+K+C+HP L E+V D + DV+ KD ++ +
Sbjct: 852 VHLRKLCNHPFLF-----ENVEDECREFWK-------------VPDVSGKDLYR-----V 888
Query: 660 SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKI 719
S K + +L KL GH +L+F Q ++ ++++ + + +K+LR+DG+TK +R ++
Sbjct: 889 SGKFELLDRVLPKLKASGHRILMFCQMTSLMTIMEDYLNYREFKYLRLDGSTKPDERGQL 948
Query: 720 VNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIG 774
+ + AP IF+L+++ GGLGL L AD VI+ D WNP D Q+ DRA+RIG
Sbjct: 949 LELYN----APNSEYFIFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIG 1004
Query: 775 QKKDVVVYRLMTCGTVEEKI 794
Q ++V V RL+T ++EEKI
Sbjct: 1005 QSREVRVLRLVTVNSIEEKI 1024
>gi|393912509|gb|EJD76769.1| hypothetical protein LOAG_16349 [Loa loa]
Length = 1390
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 162/506 (32%), Positives = 254/506 (50%), Gaps = 58/506 (11%)
Query: 298 GKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH-SRLIKRAL 356
G L P+Q +GL W+ SL+ GIL D+MGLGKT+Q + L +L L
Sbjct: 558 GNPALQLKPYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTIALVTYLMEVKKLNGPYL 617
Query: 357 VVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNS 416
++ P + +++W EL Y G ++ E VLLTTYD V
Sbjct: 618 IIVPLSTIANWSLELEKWAPHVVSIVYKGNKEARKKLEASIRRNAFNVLLTTYDYVLK-E 676
Query: 417 KSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPIQ 475
K L G W YMI+DEGH +KN + + L SA HR++++GTP+Q
Sbjct: 677 KGLLGK-----------IRWKYMIIDEGHRMKNHNCKLTLVLNGYFSAQHRLLLTGTPLQ 725
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
N L ELWAL NF P + F++ + P +K L++E+ + + + L + ++
Sbjct: 726 NKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEETM--LIIRRLHKVLR 783
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRRLK EV + L +K E ++ +++ QR LY+ ++ S G
Sbjct: 784 PFLLRRLKKEV--------ESQLPEKTEYVIKCDMSALQRMLYQHMQKGLLIDSKHAGGR 835
Query: 596 LAALTI--LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQ 653
T+ L+K+C+HP L E+V D + DV KD ++
Sbjct: 836 ALMNTVVHLRKLCNHPFLF-----ENVEDECREFWK-------------VPDVTGKDLYR 877
Query: 654 EQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKA 713
+S K + +L KL GH +L+F Q ++ ++++ + + +K+LR+DG+TK
Sbjct: 878 -----VSGKFELLDRVLPKLKASGHRILMFCQMTSLMTIMEDYLNYREFKYLRLDGSTKP 932
Query: 714 SDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVD 768
+R +++ + AP IF+L+++ GGLGL L AD VI+ D WNP D Q+ D
Sbjct: 933 DERGQLLELYN----APNSEYFIFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQD 988
Query: 769 RAYRIGQKKDVVVYRLMTCGTVEEKI 794
RA+RIGQ ++V V RL+T ++EEKI
Sbjct: 989 RAHRIGQSREVRVLRLVTVNSIEEKI 1014
>gi|402878733|ref|XP_003903027.1| PREDICTED: DNA repair and recombination protein RAD54B [Papio
anubis]
Length = 908
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 288/549 (52%), Gaps = 53/549 (9%)
Query: 304 LFPHQREGLRWLW----SLHCQGK-GGILGDDMGLGKTMQICGFL-----AGLFHSR-LI 352
L PHQ+EG+ +L+ + G+ G IL D+MGLGKT+Q + G + + +I
Sbjct: 296 LRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVI 355
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD--KGVLLTTYD 410
K+ L+V P +L+++W KE S +I+ + + ++++ ++ VL+ +Y+
Sbjct: 356 KKTLIVTPGSLVNNWKKEFQKWLGSERIKIF----TVDQDHKVEEFIKSIFYSVLIISYE 411
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + ++ F D +I DEGH +KN + + +L+ + RII++
Sbjct: 412 MLLRSLDQIKNIKF------------DLLICDEGHRLKNSAIKTTAALISLSCEKRIILT 459
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP+QN+L+E +AL +F P +LG +++ YE PI+ + A + EK +G A EL
Sbjct: 460 GTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRATEL 519
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
+ LRR + + + L K E +++ R + Q +LY LNS++V
Sbjct: 520 ACLTGLFILRRTQEII--------NKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFC 571
Query: 591 FDG----SP-LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
G SP L + LKK+C+HP LL E D N E + L++ AD
Sbjct: 572 LQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSTCDK--NEEKSLYKGLLSVFPAD 629
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
F E+ +S +L+++ +L P VL+ S + LN++QE GY +
Sbjct: 630 Y-NPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLV-SNYTQTLNILQEVCKRHGYAYT 687
Query: 706 RIDGTTKASDRVKIVNDF--QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
R+DG T S R +IV+ F Q V IFLL+S+ GG+GL L +I+ D WNP+TD
Sbjct: 688 RLDGQTPISQRQQIVDGFNSQHSSVF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATD 746
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA---TEHKEQIRYFSQ 820
Q++ R +R GQK V +YRL+T GT+EEKIY++QI K GL T+ E I+ FS
Sbjct: 747 IQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQ-FSV 805
Query: 821 QDLRELLSL 829
++L+ L +L
Sbjct: 806 EELKNLFTL 814
>gi|115921268|ref|XP_787494.2| PREDICTED: DNA repair and recombination protein RAD54B, partial
[Strongylocentrotus purpuratus]
Length = 629
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 176/559 (31%), Positives = 286/559 (51%), Gaps = 57/559 (10%)
Query: 304 LFPHQREGLRWLWSL-----HCQGKGGILGDDMGLGKTMQICGFLAGLFHS------RLI 352
L PHQ++G+ +L+ +G G IL D+MGLGKT+Q + LF +I
Sbjct: 52 LRPHQQKGVIFLYECIMGLRQYEGCGAILADEMGLGKTLQCITLVWTLFKQGPYGGKPII 111
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREY-FGTCVKTRQYELQYVLQDKGVLLTTYDI 411
KR L+V P +L+ +W +E S +I + + K +++ + V++ +Y++
Sbjct: 112 KRVLIVTPGSLVKNWCREFRKWLGSERISVFPVSSDKKVEEFKKSPLFP---VMVISYEM 168
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
+ + +RG +F D ++ DEGH +KN + + A L + RI+++G
Sbjct: 169 MVRYADDIRGITF------------DLVVCDEGHRLKNSTIKTASLLSSLAVRRRILLTG 216
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
TPIQN+L+E +++ FC P +LG + F YE PILR N A EK +G+A A EL
Sbjct: 217 TPIQNDLQEFYSIVEFCNPGVLGTSGSFHRVYEEPILRSNQPSATKEEKTLGAARATELS 276
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
+ LRR + ++ L K E +V+ + ++ Q +LY+ L S ++ S
Sbjct: 277 RLTSLFVLRRTQE--------INNKYLPPKVETVVFCKPSALQLRLYQHLLRSPLIRSCL 328
Query: 592 D---------GSP-LAALTILKKICDHPLLL---TKRAAED-VLDGMDSML----NPEDA 633
GSP L + LKK+C+ P LL +++A E+ G +S L + E++
Sbjct: 329 SRGYASSASAGSPHLVCIGALKKLCNDPSLLYQASRKADEEGKRRGGESWLLDHDDEEES 388
Query: 634 ALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLI 693
L ++ + E H C +S +L + +++ S + L+++
Sbjct: 389 LYKGLLPIYPPEYTEGRPLLA-HCGKLCVLSEMLRAMHADPTRRERLVLVSNYTQTLDIL 447
Query: 694 QESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVA-PIFLLTSQVGGLGLTLTKADRVI 752
Q +GY+F R+DG+T + R IV F IFLL+S+ GG+GL L A R++
Sbjct: 448 QALCSIEGYQFCRLDGSTPTAKRQSIVEHFNSSYAKETIFLLSSKAGGVGLNLIGASRLL 507
Query: 753 VVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHK 812
+ D WNP+ D Q++ R +R GQKK V +YRL+T GT+EEKIY++QI K L + K
Sbjct: 508 LYDIDWNPANDLQAMARVWRDGQKKTVYIYRLITAGTIEEKIYQRQISKQSLSGAVVDAK 567
Query: 813 EQIRY--FSQQDLRELLSL 829
Q FS +DLR+ LS+
Sbjct: 568 GQSGSVKFSLEDLRKNLSM 586
>gi|168062755|ref|XP_001783343.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella
patens subsp. patens]
gi|162665144|gb|EDQ51838.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella
patens subsp. patens]
Length = 2174
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 263/512 (51%), Gaps = 41/512 (8%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVA 359
G L +Q GLRWL SL+ GIL D+MGLGKT+Q+ + L ++ L+V
Sbjct: 1470 GGKLREYQLSGLRWLVSLYNNHLNGILADEMGLGKTVQVIALICYLMEAKNDHGPFLIVV 1529
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQ-YELQYVLQDKGVLLTTYDIVRNNSKS 418
P ++L +W+ EL+ + Y G + R+ Y+ + Q VL+TTY+ + +
Sbjct: 1530 PSSVLPNWLAELSRWAPRVSVIAYCGAPDERRRLYKEEIQPQQFNVLVTTYEFLMSKH-- 1587
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNL 478
D W Y+I+DEGH IKN S + L + S HR++++GTPIQNNL
Sbjct: 1588 --------DRPKLAKIPWHYIIIDEGHRIKNASCKLNAELKQYQSTHRLLLTGTPIQNNL 1639
Query: 479 KELWALFNFCCPELLGDN----KWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
+ELWAL NF P + + +WF + +E ++ AL E+ + L + +
Sbjct: 1640 EELWALLNFLLPSIFNSSDDFAQWFNKPFENVADPTAEEQALLTEEE-NLLIINRLHQVL 1698
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGS 594
+P+ LRRLK++V +E L +K E +V ++ Q+ L + + L+ G
Sbjct: 1699 RPFMLRRLKHKVENE--------LPEKIERLVRCEASAYQKLLMKHVKDKMKSLNHAKGR 1750
Query: 595 PLAALTI-LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQ 653
+ + L+ IC+HP L++ +E+ + P KL M D
Sbjct: 1751 SIQNTVMELRNICNHP-YLSQLHSEETEKVLPPHYLPIVVRFCGKLEM-------LDRIL 1802
Query: 654 EQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKA 713
+ + K+S + S +GH+VL FS ++L+++++ + KGYK+LR+DG+T
Sbjct: 1803 PKLKAANHKVSLMTSR------KGHSVLFFSTMTRLLDVMEDYLEWKGYKYLRLDGSTGG 1856
Query: 714 SDRVKIVNDFQEGDV-APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYR 772
S+R ++ DF A IFLL+ + GG+G+ L AD VI+ D WNP D Q+ RA+R
Sbjct: 1857 SERGALIQDFNAPQSEAFIFLLSIRAGGIGINLQAADTVIIFDTDWNPQVDLQAQARAHR 1916
Query: 773 IGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
IGQK+DV+V R T ++EE + +K G+
Sbjct: 1917 IGQKRDVLVLRFETVKSIEEHVRASAEYKLGV 1948
>gi|297736923|emb|CBI26124.3| unnamed protein product [Vitis vinifera]
Length = 2266
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 174/541 (32%), Positives = 264/541 (48%), Gaps = 74/541 (13%)
Query: 301 GNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVA 359
G L +Q GLRWL SL+ GIL D+MGLGKT+Q+ + L ++ + LVV
Sbjct: 1046 GGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVV 1105
Query: 360 PKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQ-YELQYVLQDKGVLLTTYDIVRNNSKS 418
P ++LS W E+ S Y G + R+ ++ + V Q VLLTTY+ + N
Sbjct: 1106 PSSVLSGWESEINFWAPSVNKIVYSGPPEERRKLFKERIVHQKFNVLLTTYEYLMNKH-- 1163
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNL 478
D W Y+++DEGH IKN S + L S+HR++++GTP+QNNL
Sbjct: 1164 --------DRPKLSKIHWHYIVIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNL 1215
Query: 479 KELWALFNFCCPELLGD----NKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
+ELWAL NF P + ++WF + +E D+ L E+ + + L + +
Sbjct: 1216 EELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENL--LIINRLHQVL 1273
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI------VL 588
+P+ LRRLK++V +E L +K E RL C+ Y+ L + +
Sbjct: 1274 RPFVLRRLKHKVENE--------LPEKIE-----RLVRCEASAYQKLLMKRVEENLGSIG 1320
Query: 589 SAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
S S ++ L+ IC+HP L++ A++V + + P L KL M
Sbjct: 1321 STKARSVHNSVMELRNICNHP-YLSQLHADEVDNLIPKHFLPPVVRLCGKLEM------- 1372
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRID 708
+ LL KL H VL FS ++L++++E + K Y++LR+D
Sbjct: 1373 -----------------LDRLLPKLKATDHRVLFFSTMTRLLDVMEEYLHWKQYRYLRLD 1415
Query: 709 GTTKASDRVKIVNDFQEGDVAP--IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 766
G T DR ++ F + D +P IFLL+ + GG+G+ L AD VI+ D WNP D Q+
Sbjct: 1416 GHTSGGDRGALIEQFNQPD-SPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQA 1474
Query: 767 VDRAYRIGQKKDVVVYRLMTCGTVEEKI---------YRKQIFKGGLFKTATEHKEQIRY 817
RA+RIGQK+DV+V RL T TVEE++ Q G F T +++ Y
Sbjct: 1475 QARAHRIGQKRDVLVLRLETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREY 1534
Query: 818 F 818
Sbjct: 1535 L 1535
>gi|242021397|ref|XP_002431131.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516380|gb|EEB18393.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 745
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 169/568 (29%), Positives = 299/568 (52%), Gaps = 82/568 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGK-----GGILGDDMGLGKTMQICGFLAGLFHS----- 349
+ N+L PHQREG+++++ K G I+ D+MGLGKT+Q + L
Sbjct: 145 LSNVLRPHQREGVKFMYDCVTGVKIENAYGCIMADEMGLGKTLQCITLMWTLLKQGPDCK 204
Query: 350 RLIKRALVVAPKTLLSHWIKELT--------AVGLSAKIREYFGTCVKT--RQYELQYVL 399
LI++A+VVAP +L+ +W E+ A+ + + ++ +++ Y + V
Sbjct: 205 PLIEKAIVVAPSSLVKNWYNEINKWLKGRVNALAIDSGSKDDIDRNLQSFMNTYSRRPV- 263
Query: 400 QDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLL 459
+L+ +Y+ R + K L E G ++ DEGH +KN Q ++L+
Sbjct: 264 --NPILIISYETFRLHVKVLHKG-----EVG-------LVLCDEGHRLKNHENQTYQALM 309
Query: 460 EIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDRE 519
+ + R+++SGTPIQN+L E ++L +F +LG F++K+E+PILRG D ++ E
Sbjct: 310 GLNAKRRVLLSGTPIQNDLLEYFSLIHFVNQGILGTAAEFRKKFEIPILRGQDANSTIEE 369
Query: 520 KRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSK----KNEMIVWLRLTSCQR 575
++ G +++ + +RR ++A LSK K E ++ + LT Q+
Sbjct: 370 RKKGQECLEQMAALVNRCLIRR------------TAALLSKYLPVKTEQVICITLTGLQK 417
Query: 576 QLYEAFLNSEIVLSA----------FDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMD 625
QLYE F+ S+ + + L+A+T LKK+C+HP L+ E+++ +
Sbjct: 418 QLYEDFIASDALKKTVREEKNSKKGMSLTALSAITTLKKLCNHPDLV----YENIMKQTE 473
Query: 626 SMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHN--VLIF 683
N + + EK D + +S K+ F+ +LL LI N +++
Sbjct: 474 GFENA------------LKYLPEKYDIKNVRPEMSGKLMFLDTLL-ALIKATTNDKIVLV 520
Query: 684 SQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLG 742
S + L+L ++ + Y+++R+DG+ R K+V F + + IF+L+S+ GG G
Sbjct: 521 SNYTQTLDLFEKLSRFRNYQYVRLDGSMTIKKRGKVVEKFNDPESKDFIFMLSSKAGGCG 580
Query: 743 LTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKG 802
L L A+R+++ DP WNP+ D+Q++ R +R GQKK +YRL++ GT+EEKI+++Q K
Sbjct: 581 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFIYRLLSTGTIEEKIFQRQAHKK 640
Query: 803 GLFKTATEHKEQI-RYFSQQDLRELLSL 829
L T +++E + R+FS+ +LR+L L
Sbjct: 641 ALSSTVVDNEEDVARHFSRDELRDLFKL 668
>gi|109086956|ref|XP_001088870.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Macaca mulatta]
Length = 908
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 288/549 (52%), Gaps = 53/549 (9%)
Query: 304 LFPHQREGLRWLW----SLHCQGK-GGILGDDMGLGKTMQICGFL-----AGLFHSR-LI 352
L PHQ+EG+ +L+ + G+ G IL D+MGLGKT+Q + G + + +I
Sbjct: 296 LRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVI 355
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD--KGVLLTTYD 410
K+ L+V P +L+++W KE S +I+ + + ++++ ++ VL+ +Y+
Sbjct: 356 KKTLIVTPGSLVNNWKKEFQKWLGSERIKIF----TVDQDHKVEEFIKSIFYSVLIISYE 411
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + ++ F D +I DEGH +KN + + +L+ + RII++
Sbjct: 412 MLLRSLDQIKNIKF------------DLLICDEGHRLKNSAIKTTAALISLSCEKRIILT 459
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP+QN+L+E +AL +F P +LG +++ YE PI+ + A + EK +G A EL
Sbjct: 460 GTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRATEL 519
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
+ LRR + + + L K E +++ R + Q +LY LNS++V
Sbjct: 520 ACLTGLFILRRTQEII--------NKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFC 571
Query: 591 FDG----SP-LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
G SP L + LKK+C+HP LL E D N E + L++ AD
Sbjct: 572 LQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSTCDK--NEEKSLYKGLLSVFPAD 629
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
F E+ +S +L+++ +L P VL+ S + LN++QE GY +
Sbjct: 630 Y-NPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLV-SNYTQTLNILQEVCKRHGYAYT 687
Query: 706 RIDGTTKASDRVKIVNDF--QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
R+DG T S R +IV+ F Q V IFLL+S+ GG+GL L +I+ D WNP+TD
Sbjct: 688 RLDGQTPISQRQQIVDGFNSQHSSVF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATD 746
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA---TEHKEQIRYFSQ 820
Q++ R +R GQK V +YRL+T GT+EEKIY++QI K GL T+ E I+ FS
Sbjct: 747 IQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQ-FSV 805
Query: 821 QDLRELLSL 829
++L+ L +L
Sbjct: 806 EELKNLFTL 814
>gi|380493148|emb|CCF34089.1| SNF2 super family protein [Colletotrichum higginsianum]
Length = 1452
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 271/522 (51%), Gaps = 77/522 (14%)
Query: 300 IGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVV 358
+G L +Q +GL+W+ SL+ GIL D+MGLGKT+Q + L + + LV+
Sbjct: 552 VGGRLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLVTYLIERKKQEGPYLVI 611
Query: 359 APKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKS 418
P + L++W E S Y G + +Q + + VLLTTY+ +
Sbjct: 612 VPLSTLTNWTLEFEKWAPSVSKIVYKGPPLARKQQQDKIRQGRFQVLLTTYEYI------ 665
Query: 419 LRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI-PSAHRIIISGTPIQNN 477
I D W +MI+DEGH +KN +++ ++ + + R+I++GTP+QNN
Sbjct: 666 ------IKDRPVLSKIKWFHMIIDEGHRMKNQNSKLTSTIQQYYHTRFRLILTGTPLQNN 719
Query: 478 LKELWALFNFCCPELLGDNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQ 535
L ELWA+ NF P + K F E + P G DK L E++I V + L + ++
Sbjct: 720 LTELWAMLNFTLPTIFKSAKTFDEWFNTPFANTGGQDKMDLTEEEQI--LVIRRLHKVLR 777
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFL-NSEIVLSAFDGS 594
P+ LRRLK +V E D L K E ++ + ++ Q +LY+ + +++I++S G
Sbjct: 778 PFLLRRLKKDV--EKD------LPDKTEKVIKCKFSALQSKLYKQMVTHNKILVSDGQGG 829
Query: 595 PLAA------LTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAE 648
A + L+K+C+HP V D +++ +NP M I++
Sbjct: 830 KAGARGLSNMIMQLRKLCNHPF---------VFDEVENTMNP----------MSISN--- 867
Query: 649 KDDFQEQHDNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKF 704
++ + + LLD+++P+ GH VL+F Q +++++++ + + K+
Sbjct: 868 ---------DLLWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDYLRYRNMKY 918
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPAWN 759
LR+DGTTK+ +R ++ +F AP +FLL+++ GGLGL L AD VI+ D WN
Sbjct: 919 LRLDGTTKSDERSDLLREFN----APNSDYFMFLLSTRAGGLGLNLQTADTVIIYDSDWN 974
Query: 760 PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
P D Q+ DRA+RIGQK +V + RL++ +VEEKI + +K
Sbjct: 975 PHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARYK 1016
>gi|227015822|gb|ACP17919.1| putative non-specific serine/threonine protein kinase [Pseudomonas
nitroreducens]
Length = 1093
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 255/520 (49%), Gaps = 90/520 (17%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHS-RLIKRA 355
P + L P+Q +GL W+ +L GGILGDDMGLGKT+Q+ + H+ RL + A
Sbjct: 622 PEGLQAELRPYQLQGLAWMQALRELELGGILGDDMGLGKTLQVLAHILTEKHAGRLDRPA 681
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYEL-QYVLQDKGVLLTTYDIVRN 414
LVV P +L+++W E+ ++ G+ +L QY L LL+TY ++
Sbjct: 682 LVVMPTSLVANWQDEIARFAPELRVLTLHGSARHQHFDDLAQYDL-----LLSTYPLLAR 736
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+ + L G + ++ DE +KN ++ A++ + + R+ ++GTP+
Sbjct: 737 DIEPLSGQAL------------HLVVFDEAQYLKNAGSKSAQAASRLDARQRLCLTGTPL 784
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
+N+L ELW+LFN P LGD + F Y PI + D L L RI
Sbjct: 785 ENHLSELWSLFNLVMPGWLGDIRHFARLYRHPIEKAGDSQRL-----------AHLNARI 833
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF-------LNSEIV 587
+P+ LRR K++V E L K+E+ + L QR LYE + EI+
Sbjct: 834 KPFLLRRRKDQVATE--------LPPKSEITHRVELDERQRDLYETVRLAMDRKVREEIL 885
Query: 588 LSAFDGSP---LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA 644
S L AL L+++C P LL
Sbjct: 886 QKGLASSQFVVLDALLKLRQVCCDPRLL-------------------------------- 913
Query: 645 DVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKF 704
+ D H S K+S +L +LD+L+ EG VL+FSQ ML LIQ + ++ +
Sbjct: 914 ----QPDLPATH---SGKLSALLEMLDELLAEGRRVLLFSQFTSMLALIQAQLQARNIPY 966
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
+ G T+ DR + V+DFQ+G V P+FL++ + GG GL LT AD VI DP WNP+ +
Sbjct: 967 ALLTGETR--DRRQPVDDFQQGRV-PLFLISLKAGGTGLNLTTADTVIHYDPWWNPAVEQ 1023
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGL 804
Q+ DRAYRIGQ K V VY+L+ GT+EEKI + Q K L
Sbjct: 1024 QATDRAYRIGQDKPVFVYKLIARGTLEEKIQQLQARKAAL 1063
>gi|399004928|ref|ZP_10707530.1| DNA/RNA helicase, superfamily II, SNF2 family [Pseudomonas sp.
GM17]
gi|398128069|gb|EJM17467.1| DNA/RNA helicase, superfamily II, SNF2 family [Pseudomonas sp.
GM17]
Length = 897
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 257/503 (51%), Gaps = 65/503 (12%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKRA 355
P + L P+Q EGL W+ SL GGIL DDMGLGKT+Q + L+ RL +
Sbjct: 419 PAGLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHALSEKNAGRLDRPC 478
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
+VV P +L+ +W+ E K+ +G +++ L D ++LTTY ++ +
Sbjct: 479 MVVMPTSLIPNWLDEAAHFTPQLKVLALYGAG----RHKHFAQLADYDLILTTYALLPKD 534
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
+ L ++LDE IKNPS++ A++ + + R+ +SGTP++
Sbjct: 535 VEQLAALPL------------HVLVLDEAQYIKNPSSKAAQAARALNARQRLCLSGTPLE 582
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
N+L ELW+LF+F P LGD K F Y +PI ++HA E R+ + L RI+
Sbjct: 583 NHLGELWSLFHFLLPGWLGDVKSFNRDYRVPI----ERHA--SEVRL-----QHLNGRIK 631
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 632 PFLLRRTKEQVATE--------LPPKTEIIHWVELNEAQRDVYETM-------------- 669
Query: 596 LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQ 655
L + KK+ D + K A + ++++L +L +D
Sbjct: 670 --RLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLV--------NEDAVPA 717
Query: 656 HDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASD 715
+ S K+ ++ +L++L EG +L+FSQ ML+LI+ + + + + G T+ D
Sbjct: 718 RGSSSGKLDSLMEMLEELFDEGRRILLFSQFTSMLSLIEAELKRRNVAYALLTGQTR--D 775
Query: 716 RVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ 775
R V DFQ G + IFL++ + GG+GL LT+AD VI DP WNP+T+NQ+ DRAYRIGQ
Sbjct: 776 RRTPVRDFQGGKLQ-IFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAYRIGQ 834
Query: 776 KKDVVVYRLMTCGTVEEKIYRKQ 798
+K V VY+L+ GTVEEKI Q
Sbjct: 835 EKPVFVYKLIARGTVEEKIQHLQ 857
>gi|268574810|ref|XP_002642384.1| Hypothetical protein CBG18388 [Caenorhabditis briggsae]
Length = 1016
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 280/532 (52%), Gaps = 58/532 (10%)
Query: 289 GPRSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH 348
GP +L K G L +Q+ G++WL ++ + ILGD+MGLGKT+QI FL+ L
Sbjct: 419 GPLDLPLL--KEGCSLHEYQKVGVKWLIMMNQKELNAILGDEMGLGKTIQIVAFLSYLKQ 476
Query: 349 SRLIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG---VL 405
+ L+V P + + +WI E S K+ Y+GT R++ V + K V+
Sbjct: 477 TGKHGPHLIVVPSSTIENWIGEFHKWCPSIKLLTYYGT-QDERKHLRHRVKKQKDNIDVI 535
Query: 406 LTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAH 465
LTTY++V + S D+ + +Y+I DEGH++KN + R K L+++
Sbjct: 536 LTTYNMVTSKS---------DDKKFFKNFSLNYVIYDEGHMLKNCDSDRYKGLMKVKGKR 586
Query: 466 RIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYEL--------PILRGNDKHALD 517
+I+++GTP+QNNL EL +L F ++ NK+ ++ L P L DK A+
Sbjct: 587 KILLTGTPLQNNLIELISLMYFVLFKVF--NKYCEDITHLLQHFKQLGPALESKDK-AMY 643
Query: 518 REKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQL 577
++ RI +E + +QPY LRRLKN+V +L K+E I+ + + Q+QL
Sbjct: 644 QQDRI-----EEAKSILQPYILRRLKNQVL--------TSLPTKSEQIIEVDMKKTQKQL 690
Query: 578 YEAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAE 637
Y+ ++ + S G +L L++ +HPLL E LD + L + + A+
Sbjct: 691 YDDIVDV-LQRSEESGDSYGSLMRLRQAANHPLLRRLEYTEQKLDKIAKQLCLREKSYAD 749
Query: 638 KLAMHIA-DVAEKDDFQEQH--DNISCKISFILS-----------LLDKLIPE----GHN 679
K H++ D+A D + + C F+L+ LDK++PE G
Sbjct: 750 KKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEELALNSGKCEQLDKMLPEIQNKGDK 809
Query: 680 VLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVG 739
VLIFSQ ML++++ + +GY + R+DG T DR +++N+F +FLL+++ G
Sbjct: 810 VLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTKAG 869
Query: 740 GLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVE 791
GLG+ LT A+ +I+ D +NP D Q+ DR +R+GQ+K V V RL++ TVE
Sbjct: 870 GLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVSKCTVE 921
>gi|345486262|ref|XP_001599976.2| PREDICTED: TATA-binding protein-associated factor 172-like [Nasonia
vitripennis]
Length = 1864
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 176/520 (33%), Positives = 267/520 (51%), Gaps = 48/520 (9%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH-SRLIKRALVVAPKTLLS 365
+Q++GL WL L+ G+L DDMGLGKT+Q LA H ++ +LV+ P TL
Sbjct: 1278 YQQQGLNWLNFLNRYQLHGVLCDDMGLGKTLQTLCILALDHHRNKQAPSSLVICPPTLTG 1337
Query: 366 HWIKELTAVGLSA--KIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSS 423
HW+ E + + +Y G ++ + L+ + +++ +YDIVR + +
Sbjct: 1338 HWVYEADKFFQTKDLSVIQYAGNPLERER--LRCRVTGYKLVVASYDIVRKDIEFF---- 1391
Query: 424 FISDEAGDDDAI-WDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELW 482
+AI W+Y +LDEGH+IKN T+ AK++ ++ + HR+I+SGTP+QN++ ELW
Sbjct: 1392 ---------EAIQWNYCVLDEGHVIKNGKTKSAKAVKKLHAHHRLILSGTPVQNDVLELW 1442
Query: 483 ALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRRL 542
+LF+F P LG K F KY PIL + A +E+ G+ + L ++ P+ LRR
Sbjct: 1443 SLFDFLMPGFLGSEKQFAAKYSRPILACREPKAGAKEQEAGALAMEALHRQVLPFLLRRN 1502
Query: 543 KNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYE--------AFLNSEIVLSAFDGS 594
K +V + L K + L+ Q+ LYE A +N+ + G
Sbjct: 1503 KEDVLKD--------LPPKITQDYYCDLSMVQKTLYEDFKQKHSAALINNASSSNPHGGH 1554
Query: 595 PLAALTILKKICDHP--LLLTKRAAEDVLDGM-----DSMLNPEDAALAEKLAMHIAD-- 645
AL L+ +C+HP +L TK + M S+ + E +A L + D
Sbjct: 1555 VFEALRYLRNVCNHPKLVLCTKHPQYQTVMNMLKQQHSSLADIEHSAKLPALKQLLLDCG 1614
Query: 646 VAEKDDFQEQHDNISCKISFIL-SLLDKLIPEGHNVLIFSQTRKMLNLIQESI---GSKG 701
+ + Q+Q + + I S + H LIF Q + ML++++ +
Sbjct: 1615 IGQNSTQQQQQQTAARNTANITESQQQSQLVSQHRALIFCQLKAMLDIVEHDLLRMHLPT 1674
Query: 702 YKFLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPS 761
+LR+DG+ A+ R +V F + LLT+QVGGLGL LT AD VI V+ WNP
Sbjct: 1675 VTYLRLDGSVPAALRHSVVARFNADPSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPM 1734
Query: 762 TDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 801
D Q++DRA+RIGQKK V VYRL+T TVEEKI Q FK
Sbjct: 1735 KDLQAMDRAHRIGQKKVVNVYRLITRQTVEEKIMGLQKFK 1774
>gi|190348672|gb|EDK41171.2| hypothetical protein PGUG_05269 [Meyerozyma guilliermondii ATCC
6260]
Length = 593
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 269/524 (51%), Gaps = 74/524 (14%)
Query: 317 SLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLLSHWIKELTAVG 375
SL+ GIL D+MGLGKT+Q + + + I LV+ P + L++W E
Sbjct: 3 SLYNNRLNGILADEMGLGKTIQTISLITYIVEVKKINGPFLVIVPLSTLTNWNLEFEKWA 62
Query: 376 LSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAI 435
S K Y GT + + + + D +LLTT++ + I D++
Sbjct: 63 PSVKKITYKGTPNQRKSLQFEVRKGDFQILLTTFEYI------------IKDKSVLAKVK 110
Query: 436 WDYMILDEGHLIKNPSTQRAKSLLE-IPSAHRIIISGTPIQNNLKELWALFNFCCPELLG 494
W +MI+DEGH +KN +++ +++L S +R+I++GTP+QNNL ELWAL NF P++
Sbjct: 111 WIHMIIDEGHRMKNANSKLSETLTHHYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFN 170
Query: 495 DNKWFKEKYELPILR--GNDKHALDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDV 552
K F E + P G DK L E+ + V + L + ++P+ LRRLK +V E D
Sbjct: 171 SVKSFDEWFNTPFANTGGQDKIELSEEETL--LVIRRLHKVLRPFLLRRLKKDV--EKD- 225
Query: 553 TSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF---DGSPLAA------LTILK 603
L K E +V R++S Q +LY+ L ++ S+ DG P+A + L+
Sbjct: 226 -----LPNKVEKVVKCRMSSLQSKLYQQMLKYNLLFSSNPDGDGKPIAIKNTNNQIMQLR 280
Query: 604 KICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNISCKI 663
KIC+HP V + +++M+NP D ++ ++ K
Sbjct: 281 KICNHPF---------VYEEVENMINP------------------TADTNDEIWRVAGKF 313
Query: 664 SFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKIVNDF 723
+ +L KL GH VLIF Q ++N++++ + + K++R+DG TKA DR ++ F
Sbjct: 314 ELLDRILPKLKATGHRVLIFFQMTSIMNIMEDFLRLRDLKYMRLDGATKADDRTGLLKLF 373
Query: 724 QEGDVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVY 782
E + FLL+++ GGLGL L AD VI+ D WNP D Q+ DRA+RIGQK +V +
Sbjct: 374 NEENSDYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRII 433
Query: 783 RLMTCGTVEEKIYRK---------QIFKGGLF--KTATEHKEQI 815
RL+T +VEE I + ++ + G F K+ TE +E +
Sbjct: 434 RLITEDSVEEMILERAHAKLEIDGKVIQAGKFDNKSTTEEQEAL 477
>gi|170594229|ref|XP_001901866.1| BRM protein [Brugia malayi]
gi|158590810|gb|EDP29425.1| BRM protein, putative [Brugia malayi]
Length = 1412
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 254/500 (50%), Gaps = 58/500 (11%)
Query: 304 LFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFH-SRLIKRALVVAPKT 362
L P+Q +GL W+ SL+ GIL D+MGLGKT+Q + L +L L++ P +
Sbjct: 587 LKPYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTIALVTYLMEVKKLNGPYLIIVPLS 646
Query: 363 LLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLRGS 422
+++W EL Y G ++ E VLLTTYD V K L G
Sbjct: 647 TIANWSLELEKWAPHVVSIVYKGNKEARKKLEASIRRNAFNVLLTTYDYVLK-EKGLLGK 705
Query: 423 SFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSA-HRIIISGTPIQNNLKEL 481
W YMI+DEGH +KN + + L SA HR++++GTP+QN L EL
Sbjct: 706 -----------IRWKYMIIDEGHRMKNHNCKLTLVLNGYFSAQHRLLLTGTPLQNKLPEL 754
Query: 482 WALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQPYFLRR 541
WAL NF P + F++ + P +K L++E+ + + + L + ++P+ LRR
Sbjct: 755 WALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEETM--LIIRRLHKVLRPFLLRR 812
Query: 542 LKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAALTI 601
LK EV + L +K E ++ +++ QR LY+ ++ S G T+
Sbjct: 813 LKKEV--------ESQLPEKTEYVIKCDMSALQRILYQHMQKGLLIDSKHAGGRALMNTV 864
Query: 602 --LKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQHDNI 659
L+K+C+HP L E+V D + DV+ KD ++ +
Sbjct: 865 VHLRKLCNHPFLF-----ENVEDECREFWK-------------VPDVSGKDLYR-----V 901
Query: 660 SCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASDRVKI 719
S K + +L KL GH +L+F Q ++ ++++ + + +K+LR+DG+TK +R ++
Sbjct: 902 SGKFELLDRVLPKLKASGHRILMFCQMTSLMTIMEDYLNYREFKYLRLDGSTKPDERGQL 961
Query: 720 VNDFQEGDVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIG 774
+ + AP IF+L+++ GGLGL L AD VI+ D WNP D Q+ DRA+RIG
Sbjct: 962 LELYN----APNSEYFIFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIG 1017
Query: 775 QKKDVVVYRLMTCGTVEEKI 794
Q ++V V RL+T ++EEKI
Sbjct: 1018 QSREVRVLRLVTVNSIEEKI 1037
>gi|398900323|ref|ZP_10649380.1| DNA/RNA helicase, superfamily II, SNF2 family [Pseudomonas sp.
GM50]
gi|398181222|gb|EJM68792.1| DNA/RNA helicase, superfamily II, SNF2 family [Pseudomonas sp.
GM50]
Length = 896
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 259/507 (51%), Gaps = 65/507 (12%)
Query: 293 TYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRL 351
T + P + L P+Q EGL W+ SL GGIL DDMGLGKT+Q + L+ RL
Sbjct: 415 TAVAPEGLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILSEKNAGRL 474
Query: 352 IKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDI 411
+ +VV P +L+ +W+ E K+ +G +R+ ++ L D ++LTTY +
Sbjct: 475 DRPCMVVMPTSLIPNWLDEAAHFTPQLKVLALYGA---SRKKHFEH-LADYDLILTTYAL 530
Query: 412 VRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISG 471
+ + + L F ++LDE IKNP+++ A + E+ + R+ +SG
Sbjct: 531 LPKDVERLAAQPF------------HVLVLDEAQYIKNPNSKAAHAARELNARQRLCLSG 578
Query: 472 TPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELR 531
TP++N+L ELW+LF+F P LGD K F Y +PI EKR + L
Sbjct: 579 TPLENHLGELWSLFHFLLPGWLGDVKSFNRDYRVPI-----------EKRASEVRLQHLN 627
Query: 532 ERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAF 591
RI+P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 628 GRIKPFLLRRTKEQVATE--------LPPKTEIIHWVELNEAQRDVYETM---------- 669
Query: 592 DGSPLAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDD 651
L + KK+ D + K A + ++++L +L A A
Sbjct: 670 ------RLAMDKKVRDE--ITRKGVARSQIIILEALLKLRQVCCDLRLVNDAALPA---- 717
Query: 652 FQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTT 711
+ S K+ ++ +L++L EG +L+FSQ ML+LI++ + +G + + G T
Sbjct: 718 ----RGSTSGKLDSLMEMLEELFEEGRRILLFSQFTSMLSLIEDELKKRGVAYAILTGQT 773
Query: 712 KASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
+ DR V +FQ G IFL++ + GG+GL LT+AD VI DP WNP+T+NQ+ DRAY
Sbjct: 774 R--DRRTPVKEFQSGKRQ-IFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAY 830
Query: 772 RIGQKKDVVVYRLMTCGTVEEKIYRKQ 798
RIGQ+K V VY+++ GTVEEKI Q
Sbjct: 831 RIGQEKPVFVYKMIARGTVEEKIQHLQ 857
>gi|355698101|gb|EHH28649.1| DNA repair and recombination protein RAD54B [Macaca mulatta]
Length = 908
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 287/549 (52%), Gaps = 53/549 (9%)
Query: 304 LFPHQREGLRWLW----SLHCQGK-GGILGDDMGLGKTMQICGFL-----AGLFHSR-LI 352
L PHQ+EG+ +L+ + G+ G IL D+MGLGKT+Q + G + + +I
Sbjct: 296 LRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVI 355
Query: 353 KRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQD--KGVLLTTYD 410
K+ L+V P +L+++W KE S +I+ + + ++++ ++ VL+ +Y+
Sbjct: 356 KKTLIVTPGSLVNNWKKEFQKWLGSERIKIF----TVDQDHKVEEFIKSIFYSVLIISYE 411
Query: 411 IVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIIS 470
++ + ++ F D +I DEGH +KN + + +L+ + RII++
Sbjct: 412 MLLRSLDQIKNIKF------------DLLICDEGHRLKNSAIKTTAALISLSCEKRIILT 459
Query: 471 GTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKEL 530
GTP+QN+L+E +AL +F P +LG +++ YE PI+ + A + EK +G A EL
Sbjct: 460 GTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRATEL 519
Query: 531 RERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSA 590
+ LRR + + + L K E +++ R + Q +LY LNS++V
Sbjct: 520 ACLTGLFILRRTQEII--------NKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFC 571
Query: 591 FDG----SP-LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIAD 645
G SP L + LKK+C+HP LL E D N E + L++ AD
Sbjct: 572 LQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSTCDK--NEEKSLYKGLLSVFPAD 629
Query: 646 VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFL 705
F E+ +S +L+++ +L P VL+ S + LN++QE GY +
Sbjct: 630 Y-NPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLV-SNYTQTLNILQEVCKRHGYAYT 687
Query: 706 RIDGTTKASDRVKIVNDF--QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
R+DG T S R +IV+ F Q V IFLL+S+ GG+GL L +I+ D WNP+TD
Sbjct: 688 RLDGQTPISQRQQIVDGFNSQHSSVF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATD 746
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA---TEHKEQIRYFSQ 820
Q++ R +R GQK V +YRL+T GT+EEKIY++QI K GL T E I+ FS
Sbjct: 747 IQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTNTSEHIQ-FSV 805
Query: 821 QDLRELLSL 829
++L+ L +L
Sbjct: 806 EELKNLFTL 814
>gi|120555512|ref|YP_959863.1| SNF2-like protein [Marinobacter aquaeolei VT8]
gi|120325361|gb|ABM19676.1| SNF2-related protein [Marinobacter aquaeolei VT8]
Length = 1086
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 264/528 (50%), Gaps = 93/528 (17%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFL-AGLFHSRLIKR 354
+P ++ L +Q++GL WL L G GG+L DDMGLGKT+Q + A RL
Sbjct: 619 VPSEVRAELRHYQQDGLNWLMFLREFGLGGVLADDMGLGKTLQTLACIQAEKTAGRLTAP 678
Query: 355 ALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRN 414
ALVV P TL+++W E K G R+ ++ + +++T+Y ++
Sbjct: 679 ALVVCPTTLIANWEAEAEKFTPGLKRLVIHGQ----RRKPFFDMVAEADLVITSYPLLHR 734
Query: 415 NSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPI 474
+ + + S+ DE +KNP+T +K+ +P+ +RI ++GTP+
Sbjct: 735 DLEQHQNQSY------------SLAFFDEAQHLKNPATVTSKAARRLPAENRIALTGTPM 782
Query: 475 QNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERI 534
+N+L ELWALF+ P L D K F+E Y PI E++ + EL R+
Sbjct: 783 ENHLGELWALFDLILPGYLADQKIFREHYRKPI-----------EEQGNQSRYAELSRRV 831
Query: 535 QPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYE---AFLNSEI-VLSA 590
+P+ LRR K++V E L +K E++ + L Q+ LYE A ++ I L A
Sbjct: 832 RPFMLRRTKDQVTPE--------LPEKTEIVRHVELNRQQKDLYETIRATMDKRIRKLLA 883
Query: 591 FDGSP------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIA 644
G+ L AL L++IC HP ++LNPE+ A
Sbjct: 884 EKGAARSQIEILDALLKLRQICCHP----------------ALLNPEETA---------- 917
Query: 645 DVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKF 704
S K+ ++ +L++L+ EG V+IFSQ ML LI+ ++ + G +
Sbjct: 918 --------------GSAKLDSLMEMLEQLLDEGRKVIIFSQFTSMLALIETTLKAAGIGY 963
Query: 705 LRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDN 764
++ G T+ DR V FQ G+ +P+FL++ + GG GL LT AD VI DP WNP+ +
Sbjct: 964 EKLTGQTR--DRATPVKRFQNGE-SPVFLISLKAGGTGLNLTAADCVIHYDPWWNPAAEQ 1020
Query: 765 QSVDRAYRIGQKKDVVVYRLMTCGTVEEKI----YRKQIFKGGLFKTA 808
Q+ DRA+RIGQ K V VYRL+T GTVEE+I RK GL+ A
Sbjct: 1021 QATDRAWRIGQDKPVFVYRLITEGTVEERIQALQARKSQLADGLYGKA 1068
>gi|346642853|ref|YP_259071.2| SNF2 family domain/helicase domain-containing protein [Pseudomonas
protegens Pf-5]
gi|341579998|gb|AAY91239.2| SNF2 family domain/helicase domain protein [Pseudomonas protegens
Pf-5]
Length = 896
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 259/503 (51%), Gaps = 66/503 (13%)
Query: 297 PGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ-ICGFLAGLFHSRLIKRA 355
P + L P+Q EGL W+ SL GGIL DDMGLGKT+Q + L+ RL +
Sbjct: 419 PQGLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILSEKNAGRLDRPC 478
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTYDIVRNN 415
+VV P +L+ +W+ E K+ +G K +L D +LLTTY ++ +
Sbjct: 479 MVVMPTSLIPNWLDEAAHFTPQLKVLALYGAGRKKHFAQLG----DHDLLLTTYALLPKD 534
Query: 416 SKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQ 475
+ L +ILDE IKNPS++ A++ E+ + R+ +SGTP++
Sbjct: 535 IELLAAQPL------------HVLILDEAQYIKNPSSKAAQAARELNARQRLCLSGTPLE 582
Query: 476 NNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRERIQ 535
N+L ELW+LF+F P LGD K F Y +PI +KHA E R+ + L RI+
Sbjct: 583 NHLGELWSLFHFLLPGWLGDAKSFNRDYRVPI----EKHA--SEVRL-----QHLNGRIK 631
Query: 536 PYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSP 595
P+ LRR K +V E L K E+I W+ L QR +YE
Sbjct: 632 PFLLRRTKEQVATE--------LPPKTEIIHWVELNEAQRDVYETM-------------- 669
Query: 596 LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQ 655
L + KK+ D + K A + ++++L KL D+ +D
Sbjct: 670 --RLAMDKKVRDE--ITRKGVARSQIIILEALL---------KLRQVCCDLRLVNDSPPT 716
Query: 656 HDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTKASD 715
+ S K+ ++ +L++L EG +L+FSQ ML+LI+ + + + + G T+ D
Sbjct: 717 RGSSSGKLDSLMEMLEELFEEGRRILLFSQFTSMLSLIEAELKRRNIAYALLTGQTR--D 774
Query: 716 RVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ 775
R V DFQ G + IFL++ + GG+GL LT+AD VI DP WNP+T++Q+ DRAYRIGQ
Sbjct: 775 RRTPVRDFQSGKLQ-IFLISLKAGGVGLNLTEADTVIHYDPWWNPATESQATDRAYRIGQ 833
Query: 776 KKDVVVYRLMTCGTVEEKIYRKQ 798
+K V VY+L+ GTVEEKI Q
Sbjct: 834 EKPVFVYKLIARGTVEEKIQHLQ 856
>gi|297826111|ref|XP_002880938.1| hypothetical protein ARALYDRAFT_481680 [Arabidopsis lyrata subsp.
lyrata]
gi|297326777|gb|EFH57197.1| hypothetical protein ARALYDRAFT_481680 [Arabidopsis lyrata subsp.
lyrata]
Length = 3451
Score = 245 bits (626), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 168/536 (31%), Positives = 259/536 (48%), Gaps = 76/536 (14%)
Query: 307 HQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA-LVVAPKTLLS 365
+Q GLRWL SL+ GIL D+MGLGKT+Q+ + L ++ + LVV P ++L
Sbjct: 753 YQMNGLRWLLSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLP 812
Query: 366 HWIKELTAVGLSAKIREYFGTCVKTRQ-YELQYVLQDKGVLLTTYDIVRNNSKSLRGSSF 424
W E+ S Y G + R+ ++ Q V Q VLLTTY+ + N + S
Sbjct: 813 GWQSEINFWAPSIHKIVYCGPPEERRKLFKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKI 872
Query: 425 ISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWAL 484
W Y+I+DEGH IKN S + L S+HR++++GTP+QNNL+ELWAL
Sbjct: 873 H----------WHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWAL 922
Query: 485 FNFCCPELLGDNKWFKEKYELPILRG--NDKHALDREKRIGSAVAKELRERIQPYFLRRL 542
NF P + ++ F + + P N + + L + ++P+ LRRL
Sbjct: 923 LNFLLPNIFNSSEDFSQWFNKPFQSNGENTAEEALLSEEENLLIINRLHQVLRPFVLRRL 982
Query: 543 KNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEI------VLSAFDGSPL 596
K++V +E L +K E RL C+ Y+ L + + +A +
Sbjct: 983 KHKVENE--------LPEKIE-----RLIRCEASAYQKLLMKRVEDNLGSIGNAKSRAVH 1029
Query: 597 AALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHIADVAEKDDFQEQH 656
++ L+ IC+HP L++ AE+V + + P L KL M
Sbjct: 1030 NSVMELRNICNHP-YLSQLHAEEVNNKIPKHFLPPIVRLCGKLEM--------------- 1073
Query: 657 DNISCKISFILSLLDKLIPE----GHNVLIFSQTRKMLNLIQESIGSKGYKFLRIDGTTK 712
LD+++P+ H VL FS ++L+++++ + KGYK+LR+DG T
Sbjct: 1074 -------------LDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTS 1120
Query: 713 ASDRVKIVNDF-QEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAY 771
DR +++ F + G IFLL+ + GG+G+ L AD VI+ D WNP D Q+ RA+
Sbjct: 1121 GGDRGALIDGFNKSGSPYFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAH 1180
Query: 772 RIGQKKDVVVYRLMTCGTVEEKI---------YRKQIFKGGLFKTATEHKEQIRYF 818
RIGQKKDV+V R T +VEE++ Q G F T +++ Y
Sbjct: 1181 RIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYL 1236
>gi|412990046|emb|CCO20688.1| Mot1 [Bathycoccus prasinos]
Length = 2032
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 268/552 (48%), Gaps = 72/552 (13%)
Query: 292 STYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRL 351
+ + LP K L P+QR+G+ WL L G L DDMGLGKT+Q LA R
Sbjct: 1412 ANFELPFKCKYQLRPYQRDGVNWLAFLRRFKLHGALCDDMGLGKTLQSTCILASSTCERR 1471
Query: 352 IK-----RALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG--- 403
K L++ P TL+ HW E++ + + C + + LQ+
Sbjct: 1472 AKGLPTMPHLIICPPTLVGHWAHEIS---MYTEDPNLLSVCEYQGSPQERLALQNDARAK 1528
Query: 404 --VLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEI 461
V++ +YD VR +++ + D W Y +LDEGH I+NP ++ ++ ++
Sbjct: 1529 FDVVVASYDSVRADAEKF---FHVVD--------WCYCVLDEGHAIRNPKSRVCVAVKQV 1577
Query: 462 PSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKR 521
+ HR+++SGTPIQN++ ELW+LF+F P LG + FKE Y + R
Sbjct: 1578 KAEHRLLLSGTPIQNDVVELWSLFDFLMPGFLGTEREFKENYGIAAARSKAAKKGGGLTE 1637
Query: 522 IGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAF 581
G+ L +++ P+ LRR K++V + L K V++ LT+ QR+LY+ F
Sbjct: 1638 QGALTVGRLHKQVMPFVLRRTKDQVLKD--------LPPKIIQDVFVDLTAAQRRLYDTF 1689
Query: 582 LNSEI------VLSAFDGSP------------LAALTILKKICDHPLLL---------TK 614
S LS+ G AL L+K+C HP L+ K
Sbjct: 1690 ETSGAKEDVSKALSSGAGGADNSGGNGGSVHVFQALQYLRKLCSHPRLVDGSLNEKSSAK 1749
Query: 615 RAAEDVLDGMDSMLN--PEDAALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDK 672
A+ + DG D+ +N P+ AL + L + +D F N + +
Sbjct: 1750 SVAKRIADGSDNDMNWSPKFEALKQIL---LDCGIGRDAF-----NDDEEGGGGGADDAA 1801
Query: 673 LIPEGHNVLIFSQTRKMLNLIQESIGS---KGYKFLRIDGTTKASDRVKIVNDFQEGDVA 729
H VL+F+Q + +L+L+++ + K +LR+DG+ A +R + F
Sbjct: 1802 ANKGNHRVLVFAQLKSLLDLVEDELFQSHMKDVSWLRLDGSVPAHERFNVARKFNADPTI 1861
Query: 730 PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGT 789
+ LLT+ VGGLGL LT AD V+ ++ WNP D Q++DRA+R+GQKK V VYR++T GT
Sbjct: 1862 DVLLLTTHVGGLGLNLTTADTVVFLEHDWNPQKDLQAMDRAHRLGQKKTVNVYRILTRGT 1921
Query: 790 VEEKIYRKQIFK 801
+EEK+ Q FK
Sbjct: 1922 IEEKVMSLQRFK 1933
>gi|242006444|ref|XP_002424060.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212507366|gb|EEB11322.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1457
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 165/556 (29%), Positives = 274/556 (49%), Gaps = 81/556 (14%)
Query: 291 RSTYMLPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSR 350
+++ M+ GK+ +Q +GL WL SL GIL D+MGLGKT+Q G + L +
Sbjct: 637 QASIMVNGKLKE----YQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIGLITYLMEKK 692
Query: 351 -LIKRALVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKGVLLTTY 409
++ L++ P + LS+W+ E S + Y G+ R + Q + VLLTTY
Sbjct: 693 KVMGPFLIIVPLSTLSNWVLEFEKWAPSVVVVAYKGSPHLRRSIQNQMRSKKFNVLLTTY 752
Query: 410 DIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSL-LEIPSAHRII 468
+ + I D+ W +MI+DEGH +KN + + L + HR++
Sbjct: 753 EYI------------IKDKGVLAKLHWRFMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLL 800
Query: 469 ISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAK 528
++GTP+QN L ELWAL NF P + F++ + P +K L+ E+ I + +
Sbjct: 801 LTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETI--LIIR 858
Query: 529 ELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVL 588
L + ++P+ LRRLK EV + L K E I+ ++ QR LY + ++L
Sbjct: 859 RLHKVLRPFLLRRLKKEV--------ESQLPDKVEYIIKCDMSGLQRVLYRHMQSKGVLL 910
Query: 589 SAFDGSP------------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALA 636
+ DGS + + L+K+C+HP L + +
Sbjct: 911 T--DGSEKGAKGKGGAKALMNTIVQLRKLCNHPFLFQQ--------------------IE 948
Query: 637 EKLAMHIAD----VAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNL 692
EK H+ V+ D ++ S K + +L KL H VL+F Q +++ +
Sbjct: 949 EKYCDHVGAASGVVSGPDLYR-----ASGKFELLDRILPKLKATNHRVLLFCQMTQLMTI 1003
Query: 693 IQESIGSKGYKFLRIDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRV 751
+++ + + + +LR+DG TK+ DR +++ F D +FLL+++ GGLGL L AD V
Sbjct: 1004 MEDYLTWRNFSYLRLDGATKSEDRGELLRRFNSKDSEYFLFLLSTRAGGLGLNLQAADTV 1063
Query: 752 IVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI-----YR----KQIFKG 802
I+ D WNP D Q+ DRA+RIGQ+ +V V RL+T +VEE+I Y+ +++ +
Sbjct: 1064 IIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLLTVNSVEERILAAARYKLNMDEKVIQA 1123
Query: 803 GLFKTATEHKEQIRYF 818
G+F + E+ ++
Sbjct: 1124 GMFDQKSTGSERQQFL 1139
>gi|34495520|ref|NP_899735.1| SWI/SNF family helicase [Chromobacterium violaceum ATCC 12472]
gi|34101375|gb|AAQ57744.1| probable SWI/SNF family helicase [Chromobacterium violaceum ATCC
12472]
Length = 910
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 242/511 (47%), Gaps = 99/511 (19%)
Query: 296 LPGKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRA 355
+P + L P+Q +G W+ L G G L DDMGLGKT+Q L H +
Sbjct: 449 VPATLNATLRPYQLQGFAWMARLAHWGVGACLADDMGLGKTVQTLSLLLTRAH---LGPQ 505
Query: 356 LVVAPKTLLSHWIKELTAVGLSAKIREYFGTCVKTRQYELQYVLQDKG---VLLTTYDIV 412
L VAP ++ +W+ E F ++ R Y L D G +++ +Y ++
Sbjct: 506 LAVAPTSVALNWLAEAA----------RFAPSLRLRAYHQHRRLDDVGPGDLVVVSYGLL 555
Query: 413 RNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGT 472
+ +++ D W +LDE IKNP +QRA+ + + R+ SGT
Sbjct: 556 QREAEAF------------CDVHWASAVLDEAQAIKNPQSQRAQVAQSLRADFRLAASGT 603
Query: 473 PIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHALDREKRIGSAVAKELRE 532
P++N+L ELW+LF F P LLG+ F+++Y PI G+D +L+
Sbjct: 604 PVENHLGELWSLFRFIAPGLLGNLAQFEQRYAQPIADGDDT------------ARAQLKA 651
Query: 533 RIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQRQLYEAFLNSEIVLSAFD 592
IQPY LRR K EV E L K E + L+ +R +YEA + E + +
Sbjct: 652 LIQPYLLRRTKREVLTE--------LPPKTETTRLIELSEQERHVYEA-MRQEALARVAE 702
Query: 593 GSP---------LAALTILKKICDHPLLLTKRAAEDVLDGMDSMLNPEDAALAEKLAMHI 643
P LA LT L++ C HP + P+ A A KLA
Sbjct: 703 ADPAAGGQTMQALAELTRLRRFCCHP----------------KLTQPDSALPASKLAA-F 745
Query: 644 ADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNLIQESIGSKGYK 703
A++ E+ LLD GH L+FSQ L L+ E + +G +
Sbjct: 746 AEICEE-------------------LLDN----GHKALVFSQFVDHLALVAEHLRQRGVR 782
Query: 704 FLRIDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 763
F +DG T + R ++ FQ GD +FL++ + GG GL LT AD VI +DP WNP+ +
Sbjct: 783 FHYLDGGTPSRQRKASMDAFQAGD-GDLFLISLKAGGTGLNLTAADYVIHLDPWWNPAVE 841
Query: 764 NQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI 794
+Q+ DRAYR+GQ++ V VYRL+ GT+EEKI
Sbjct: 842 DQASDRAYRMGQQRPVTVYRLVAAGTIEEKI 872
>gi|323453075|gb|EGB08947.1| hypothetical protein AURANDRAFT_53418 [Aureococcus anophagefferens]
Length = 738
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 277/542 (51%), Gaps = 60/542 (11%)
Query: 287 LSGPRSTYMLP-GKIGNMLFPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAG 345
+ G R+ P G G L P+Q EGLRWL +L G GIL D+MGLGKT+Q+ +A
Sbjct: 149 MKGDRNLVQQPTGMTGGTLKPYQVEGLRWLATLFENGLSGILADEMGLGKTIQVIALIAH 208
Query: 346 LFHSRLIKRALVVAPKTLLSHWIKELT--AVGLSAKIREYFGTC---VKTRQYELQYVLQ 400
+ + V AP L +W+ E G+SA + Y G+ R+ + LQ
Sbjct: 209 IREKNVKGPICVAAPLATLPNWMNEFKKWVPGISALL--YHGSKQHRADLRKTAMATSLQ 266
Query: 401 ---DKGVLLTTYDIVRNNSKSLRGSSFISDEAGDDDAIWDYMILDEGHLIKNPSTQRAKS 457
D V++T+Y++ I D A + Y+I+DEG +KN + +
Sbjct: 267 NEEDFPVIVTSYEVC------------IIDRAPLSHFKFKYLIIDEGQRVKNRDCRLVRE 314
Query: 458 LLEIPSAHRIIISGTPIQNNLKELWALFNFCCPELLGDNKWFKEKYELPILRGNDKHA-- 515
L ++ + +R+++SGTPIQN L+ELW+L NF P++ D F+ + + G +
Sbjct: 315 LKKLNTENRLLLSGTPIQNTLEELWSLLNFVNPQIFDDLNVFQSWFGFRNI-GQETQVDD 373
Query: 516 -LDREKRIGSAVAKELRERIQPYFLRRLKNEVFHEDDVTSSATLSKKNEMIVWLRLTSCQ 574
+D E + + +L E ++P+ LRR+K++V L K E++V+ +T Q
Sbjct: 374 IIDDESK--DRIVTKLHEILRPFLLRRVKSDVLR-------GVLPDKKEIVVYAPMTPLQ 424
Query: 575 RQLYEAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKR--AAEDVLDGMDSMLNPED 632
+ YEA + + + + + A + ++ + +L+ +R A L G N E
Sbjct: 425 KS-YEALILERKLKDSLIAAGIPATS--HEVSEQNMLMNQRKNANHPFLFGEPRDANGEF 481
Query: 633 AALAEKLAMHIADVAEKDDFQEQHDNISCKISFILSLLDKLIPEGHNVLIFSQTRKMLNL 692
+A A+ N + K + +L KL +GH VL+FSQ ++LN+
Sbjct: 482 IGVATPKALV---------------NAAGKFRLLERILPKLKAQGHKVLLFSQMTELLNI 526
Query: 693 IQESIGSKGYKFLRIDGTTKASDRVKIVNDF----QEGDVAPIFLLTSQVGGLGLTLTKA 748
I++ + + + + RIDG + S+R + ++ F QE + +F+L+++ GGLG+ L A
Sbjct: 527 IEDYLRWREWNYFRIDGGVELSERQRQIDAFNGEGQESNEYFVFMLSTRAGGLGINLATA 586
Query: 749 DRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTA 808
D VI+ D WNP D Q++DRA+RIGQK+DVVVYR +T G+ E + KQI K L + A
Sbjct: 587 DTVILFDSDWNPHQDAQAMDRAHRIGQKRDVVVYRFLTSGSAEIGMMEKQISKKKLERMA 646
Query: 809 TE 810
+
Sbjct: 647 VQ 648
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,161,850,677
Number of Sequences: 23463169
Number of extensions: 716984277
Number of successful extensions: 1886255
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13729
Number of HSP's successfully gapped in prelim test: 3368
Number of HSP's that attempted gapping in prelim test: 1808005
Number of HSP's gapped (non-prelim): 40187
length of query: 1019
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 866
effective length of database: 8,769,330,510
effective search space: 7594240221660
effective search space used: 7594240221660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 82 (36.2 bits)