Query 001732
Match_columns 1019
No_of_seqs 42 out of 44
Neff 2.5
Searched_HMMs 13730
Date Tue Mar 26 17:27:44 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001732.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1027-1031//hhsearch_scop/001732hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cvda1 a.45.1.1 (A:76-199) Cl 14.4 27 0.002 12.0 2.3 58 413-490 56-116 (124)
2 d2c4ja1 a.45.1.1 (A:86-218) Cl 12.4 31 0.0022 11.7 2.4 60 413-492 53-115 (133)
3 d1v54e_ a.118.11.1 (E:) Cytoch 12.0 32 0.0023 11.6 4.8 69 539-643 14-98 (105)
4 d3gtub1 a.45.1.1 (B:85-224) Cl 7.7 46 0.0033 10.5 2.5 28 465-492 90-119 (140)
5 d1m0ua1 a.45.1.1 (A:123-249) C 6.7 51 0.0037 10.2 1.3 14 466-479 93-106 (127)
6 d1a6qa1 a.159.1.1 (A:297-368) 5.7 60 0.0043 9.8 1.6 18 631-650 38-55 (72)
7 d2p9ba1 b.92.1.10 (A:9-70,A:39 5.6 61 0.0044 9.7 0.7 38 187-227 32-70 (118)
8 d1tu7a1 a.45.1.1 (A:78-208) Cl 5.5 63 0.0046 9.7 2.3 27 465-491 88-116 (131)
9 d1b48a1 a.45.1.1 (A:80-222) Cl 5.5 63 0.0046 9.6 2.6 35 465-499 92-129 (143)
10 d1v31a_ a.42.1.1 (A:) Hypothet 5.0 23 0.0017 12.4 -2.5 22 243-264 7-28 (93)
No 1
>d2cvda1 a.45.1.1 (A:76-199) Class sigma GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.40 E-value=27 Score=12.01 Aligned_cols=58 Identities=17% Similarity=0.162 Sum_probs=32.3
Q ss_pred HHH-CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH--HHHHHHHHHH
Q ss_conf 000-0268876557888013333115433456999400100023455544678851014430246888--4334689984
Q 001732 413 LEQ-LTVDMPLVASQLSPEYLLLVRNSKLASFGTSPKDQMKSKRFSKNIKFSTDPIFMDSFPKLKRWY--RQNEECIAST 489 (1019)
Q Consensus 413 lE~-~~g~g~~vgs~lt~eyLLllRN~~~~s~~~~~~~~~~~~~~~~~~~~s~~Pv~iDSFPKLk~WY--~Q~qaCiASt 489 (1019)
+|. +.+.+=.+|.++|.-=+.+..-- +.. ...+|..++.||+|+.|| .++..-|+..
T Consensus 56 le~~L~~~~yl~G~~~T~aDi~l~~~l----------~~~----------~~~~~~~~~~~P~L~~~~~rv~~~P~vk~y 115 (124)
T d2cvda1 56 LDTYLGGREWLIGMSVTWADFYWEICS----------TTL----------LVFKPDLLDNHPRLVTLRKKVQAIPAVANW 115 (124)
T ss_dssp HHHHHTTCSSSSTTSCCHHHHHHHHHH----------HHH----------HHHCTTTTTTCHHHHHHHHHHHTSHHHHHH
T ss_pred HHHHHCCCCEEECCCCCHHHHHHHHHH----------HHH----------HHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf 999817798010785719899999999----------999----------986326553069999999999909999999
Q ss_pred H
Q ss_conf 3
Q 001732 490 L 490 (1019)
Q Consensus 490 l 490 (1019)
+
T Consensus 116 l 116 (124)
T d2cvda1 116 I 116 (124)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 2
>d2c4ja1 a.45.1.1 (A:86-218) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.45 E-value=31 Score=11.65 Aligned_cols=60 Identities=17% Similarity=0.237 Sum_probs=34.1
Q ss_pred HHH-CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH--HHHHHHHHHH
Q ss_conf 000-0268876557888013333115433456999400100023455544678851014430246888--4334689984
Q 001732 413 LEQ-LTVDMPLVASQLSPEYLLLVRNSKLASFGTSPKDQMKSKRFSKNIKFSTDPIFMDSFPKLKRWY--RQNEECIAST 489 (1019)
Q Consensus 413 lE~-~~g~g~~vgs~lt~eyLLllRN~~~~s~~~~~~~~~~~~~~~~~~~~s~~Pv~iDSFPKLk~WY--~Q~qaCiASt 489 (1019)
+|. +.+.+=-+|.++|.-=+.+...-. ... -..|-.+|.||+|+.|| .++..-|+.-
T Consensus 53 le~~L~~~~~l~G~~~T~aD~~~~~~l~----------~~~----------~~~~~~l~~~P~L~~~~~rv~~~P~ik~y 112 (133)
T d2c4ja1 53 YSQFLGKQPWFLGDKITFVDFIAYDVLE----------RNQ----------VFEPSCLDAFPNLKDFISRFEGLEKISAY 112 (133)
T ss_dssp HHHHHTTCSBTTBSSCCHHHHHHHHHHH----------HHH----------HHSTTTTTTCHHHHHHHHHHHHSHHHHHH
T ss_pred HHHHHCCCCEEECCCCCHHHHHHHHHHH----------HHH----------HHCCHHHHHCCHHHHHHHHHHHCHHHHHH
T ss_conf 9999577980246986677999999999----------999----------86901656594599999999829899999
Q ss_pred HHC
Q ss_conf 304
Q 001732 490 LTG 492 (1019)
Q Consensus 490 lSg 492 (1019)
+..
T Consensus 113 l~s 115 (133)
T d2c4ja1 113 MKS 115 (133)
T ss_dssp HHS
T ss_pred HHC
T ss_conf 838
No 3
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=11.98 E-value=32 Score=11.56 Aligned_cols=69 Identities=28% Similarity=0.536 Sum_probs=43.1
Q ss_pred CCCCCCCCHHHHHH-----------HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH-----HHHHC
Q ss_conf 21456760357852-----------224579999853026988903564424564310303488998874-----32210
Q 001732 539 VSIKLKVPAWDILE-----------ATPFVLDAALAACAHGRLSPRELATGLKELSDCLPATLATVVSYF-----SAEVT 602 (1019)
Q Consensus 539 ~~~rp~lPAWdiLE-----------AvPfVldaaLTACaHGrLS~ReLaTGLrDL~DFLPASlatIvSYF-----SAEVT 602 (1019)
-..||.+-.||+-. --|=|++|||-|| |-+-|| |+-|-+| -.+..
T Consensus 14 ~F~~~~iD~we~rrgmN~l~~~DlVPeP~Ii~aALrAc--------------RRvND~-----alAVR~lE~vK~K~~~~ 74 (105)
T d1v54e_ 14 YFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRAC--------------RRLNDF-----ASAVRILEVVKDKAGPH 74 (105)
T ss_dssp HHTCTTCCHHHHHHHHHHHTTSSBCCCHHHHHHHHHHH--------------HHTTCH-----HHHHHHHHHHHHHTTTC
T ss_pred HHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH--------------HHHHHH-----HHHHHHHHHHHHHHCCC
T ss_conf 84675740899999999985156689909999999999--------------884007-----99999999999873470
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 34333234489999993442244999999999860877655
Q 001732 603 RGLWKPAFMNGTDWPSPATNLSSIEQQIKKILAATGVDVPT 643 (1019)
Q Consensus 603 RGiWKpv~MNGtDWPSPAAnL~~VE~eIK~ILAatGVdvP~ 643 (1019)
.++|. -+-+|||..+..-|++-|-
T Consensus 75 k~~y~-----------------yilqelkptl~ELGI~t~E 98 (105)
T d1v54e_ 75 KEIYP-----------------YVIQELRPTLNELGISTPE 98 (105)
T ss_dssp TTHHH-----------------HHHHHHHHHHHHHTCCCTT
T ss_pred HHHHH-----------------HHHHHHHHHHHHHCCCCHH
T ss_conf 88999-----------------9999986699995899888
No 4
>d3gtub1 a.45.1.1 (B:85-224) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.70 E-value=46 Score=10.54 Aligned_cols=28 Identities=39% Similarity=0.580 Sum_probs=20.6
Q ss_pred CCCCCCCCHHHHHHH--HHHHHHHHHHHHC
Q ss_conf 851014430246888--4334689984304
Q 001732 465 DPIFMDSFPKLKRWY--RQNEECIASTLTG 492 (1019)
Q Consensus 465 ~Pv~iDSFPKLk~WY--~Q~qaCiAStlSg 492 (1019)
.|...+.||+|+.|| .++..-|+.-+..
T Consensus 90 ~~~~~~~~P~L~~~~~rv~~~P~Ik~yl~s 119 (140)
T d3gtub1 90 DPKCLDEFPNLKAFMCRFEALEKIAAYLQS 119 (140)
T ss_dssp CGGGGTTCHHHHHHHHHHHTSHHHHHHHHC
T ss_pred CCCCHHCCHHHHHHHHHHHCCHHHHHHHHC
T ss_conf 920000075899999999839889999816
No 5
>d1m0ua1 a.45.1.1 (A:123-249) Class sigma GST {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=6.72 E-value=51 Score=10.24 Aligned_cols=14 Identities=14% Similarity=0.418 Sum_probs=10.7
Q ss_pred CCCCCCCHHHHHHH
Q ss_conf 51014430246888
Q 001732 466 PIFMDSFPKLKRWY 479 (1019)
Q Consensus 466 Pv~iDSFPKLk~WY 479 (1019)
|-..|.||+|++||
T Consensus 93 ~~~~~~~P~L~~~~ 106 (127)
T d1m0ua1 93 RDLLEPYPALRGVV 106 (127)
T ss_dssp SCTTTTCHHHHHHH
T ss_pred CCHHHCCHHHHHHH
T ss_conf 62644485899999
No 6
>d1a6qa1 a.159.1.1 (A:297-368) Protein serine/threonine phosphatase 2C, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.70 E-value=60 Score=9.80 Aligned_cols=18 Identities=28% Similarity=0.645 Sum_probs=10.7
Q ss_pred HHHHHHHCCCCCCCCCCCCC
Q ss_conf 99998608776556779998
Q 001732 631 KKILAATGVDVPTVAVGGNS 650 (1019)
Q Consensus 631 K~ILAatGVdvP~~~~gg~s 650 (1019)
-+.|++. |||+++|||+-
T Consensus 38 m~~L~~e--~Ip~LPPGGGL 55 (72)
T d1a6qa1 38 MRTLASE--NIPSLPPGGEL 55 (72)
T ss_dssp HHHHHHT--TCSSCCTTTGG
T ss_pred HHHHHHC--CCCCCCCCCCH
T ss_conf 9999866--89999999659
No 7
>d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]}
Probab=5.61 E-value=61 Score=9.74 Aligned_cols=38 Identities=5% Similarity=-0.072 Sum_probs=23.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCC-CEECCCCCCCCCC
Q ss_conf 8875444575137899998631112234-2002452136788
Q 001732 187 NGLATSCLGNMRHLIVEACIARNLLDTS-AYLWPGYVNASDS 227 (1019)
Q Consensus 187 ~d~~~~~~GNMrHLIVEaCIaRnLlDtS-aY~WPGYv~~~~~ 227 (1019)
+|..+..+|.....-.. -.-..+|.+ .|.-||.++. |.
T Consensus 32 ~dG~I~~vg~~~~~~~~--~~~~viD~~Gk~v~PGlid~-H~ 70 (118)
T d2p9ba1 32 ADGRIEQVAPSIETSIP--AEYHYLDGTGKIVMLEVGKS-AD 70 (118)
T ss_dssp TTSBEEEEEEGGGCCCC--TTCEEEECTTCEEECCTTSB-CC
T ss_pred CCCEEEEECCCCCCCCC--CEEEEEECCCCEEEEEECCE-EE
T ss_conf 59859997233001344--20699955686988001030-48
No 8
>d1tu7a1 a.45.1.1 (A:78-208) Class pi GST {Onchocerca volvulus [TaxId: 6282]}
Probab=5.49 E-value=63 Score=9.66 Aligned_cols=27 Identities=26% Similarity=0.423 Sum_probs=18.4
Q ss_pred CCCCCCCCHHHHHHH--HHHHHHHHHHHH
Q ss_conf 851014430246888--433468998430
Q 001732 465 DPIFMDSFPKLKRWY--RQNEECIASTLT 491 (1019)
Q Consensus 465 ~Pv~iDSFPKLk~WY--~Q~qaCiAStlS 491 (1019)
.|-.+|.||+|+.|| ..+..-|+.-+.
T Consensus 88 ~~~~~~~~P~L~~~~~rv~~~P~Ik~yl~ 116 (131)
T d1tu7a1 88 DPHCLDKFPLLKVFHQRMKDRPKLKEYCE 116 (131)
T ss_dssp CTTTTTTCHHHHHHHHHHHTSHHHHHHHH
T ss_pred CHHHHHCCHHHHHHHHHHHCCHHHHHHHH
T ss_conf 91442104799999999990988999981
No 9
>d1b48a1 a.45.1.1 (A:80-222) Class alpha GST {Mouse (Mus musculus), (a1-4) [TaxId: 10090]}
Probab=5.46 E-value=63 Score=9.65 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=24.9
Q ss_pred CCCCCCCCHHHHHHH--HHHHHHHHHHHH-CCCCCCHH
Q ss_conf 851014430246888--433468998430-45579707
Q 001732 465 DPIFMDSFPKLKRWY--RQNEECIASTLT-GLVHGTSV 499 (1019)
Q Consensus 465 ~Pv~iDSFPKLk~WY--~Q~qaCiAStlS-gl~~g~pV 499 (1019)
+|-.++.||+|+.|| ..+...|+..+. +--+..|.
T Consensus 92 ~~~~~~~~P~L~~~~~rv~~~P~ik~yl~~~~~~k~p~ 129 (143)
T d1b48a1 92 SAPVLSDFPLLQAFKTRISNIPTIKKFLQPGSQRKPPP 129 (143)
T ss_dssp CTTGGGGCHHHHHHHHHHHTSHHHHHHHSTTSSCCCCC
T ss_pred CCCHHHHCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCC
T ss_conf 91033357779999999982989999876776458999
No 10
>d1v31a_ a.42.1.1 (A:) Hypothetical protein AT5G14170 (rafl11-05-p19) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=5.03 E-value=23 Score=12.42 Aligned_cols=22 Identities=14% Similarity=0.188 Sum_probs=10.3
Q ss_pred CCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 1145899993334433147898
Q 001732 243 SLMKGSPLTPSLTNALVVTPAS 264 (1019)
Q Consensus 243 ~fM~GspLt~~L~naLv~tPAs 264 (1019)
-|.+--.|++.|.+.|-..+.|
T Consensus 7 G~~~~~~lS~~La~~lg~~~~s 28 (93)
T d1v31a_ 7 GVPEKFKLSTALMDVLGIEVET 28 (93)
T ss_dssp SSCCCEECCHHHHHHSCCSEEC
T ss_pred CCCCCCCCCHHHHHHHCCCCCC
T ss_conf 9868735899999988768676
Done!