Query 001734
Match_columns 1019
No_of_seqs 553 out of 2905
Neff 5.6
Searched_HMMs 29240
Date Tue Mar 26 16:12:48 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001734.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1032-1036//hhsearch_pdb/001734hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4etp_A Kinesin-like protein KA 1.0 1 1 751.3 38.5 348 473-828 38-402 (403)
2 3u06_A Protein claret segregat 1.0 1 1 743.1 36.2 349 475-833 40-392 (412)
3 2rep_A Kinesin-like protein KI 1.0 1 1 723.1 29.2 343 481-823 9-376 (376)
4 3cob_A Kinesin heavy chain-lik 1.0 1 1 720.6 28.9 335 490-832 1-336 (369)
5 3t0q_A AGR253WP; kinesin, alph 1.0 1 1 710.3 31.2 330 490-827 1-348 (349)
6 1f9v_A Kinesin-like protein KA 1.0 1 1 701.8 30.4 329 492-828 1-346 (347)
7 2y65_A Kinesin, kinesin heavy 1.0 1 1 700.4 25.9 351 491-866 8-364 (365)
8 3b6u_A Kinesin-like protein KI 1.0 1 1 699.4 26.1 341 487-831 14-361 (372)
9 2owm_A Nckin3-434, related to 1.0 1 1 699.0 29.1 338 487-831 31-421 (443)
10 1x88_A Kinesin-like protein KI 1.0 1 1 698.3 22.5 339 490-830 4-357 (359)
No 1
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=751.31 Aligned_cols=348 Identities=42% Similarity=0.626 Sum_probs=303.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC-CCCCCCCEEEEC---CCC--EEEEECCCCCCCCCCEEEEECEE
Q ss_conf 988999998555555554105987899202899987-668885189967---898--69992788889988513531305
Q 001734 473 EKYHVILAENRRLYNEVQDLKGNIRVYCRIRPFLPG-QSKKQTTIEYIG---ENG--ELVVSNPLKQGKDNHRLFKFNKV 546 (1019)
Q Consensus 473 ~~y~~~l~erRkL~N~iqeLKGnIRV~vRVRP~~~~-e~~~~~~v~~~~---~~~--~i~i~~p~~~~k~~~k~F~FD~V 546 (1019)
+.+..+...||+|||++|||||||||||||||+++. +......+.+.. ..+ .+.+..+. .....+.|.||+|
T Consensus 38 ~~~~~~~~~rr~l~n~~~elkgnIrV~vRvRP~~~~~e~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~F~FD~V 115 (403)
T 4etp_A 38 EILIKEETVRRTLHNELQELRGNIRVYLRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQ--NTAQVHEFKFDKI 115 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSEEEEEEECCCCTTTSCSCCTTEEECCCBTTTTBEEEEEEECS--SSCEEEEEEESEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCC--CCCCCEEEECCEE
T ss_conf 99999999999999899971898699999088997634467870687403677884379982678--8767568776889
Q ss_pred ECCCCCHHHHHHCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHH-CCCCCEEEE
Q ss_conf 4999874779721198899977576534984143378876033067899988642129999999999862-348803999
Q 001734 547 FGPEASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISES-RKNSILYEV 625 (1019)
Q Consensus 547 F~~~atQeeVf~~~~pLI~svldG~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~~LF~~~~~-~~~~~~~~V 625 (1019)
|+++++|++||.++.|+|+++|+|||+||||||||||||||||+|+ ++|||||++++||..++. ....+.|.|
T Consensus 116 F~~~~~Q~~Vf~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~g~------~~Giipr~~~~lF~~i~~~~~~~~~~~v 189 (403)
T 4etp_A 116 FDQQDTNVDVFKEVGQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNP------GDGIIPSTISHIFNWINKLKTKGWDYKV 189 (403)
T ss_dssp ECTTCCHHHHHHHHHHHHHHHHTTCCEEEEEESCTTSSHHHHHHCT------TTSHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCC------CCCCCHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 7998865899999999999985896169999777999983674799------9863214799999888764036834899
Q ss_pred EEEEEEEECCEEEECCCCCCC-------CCCCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 999999963514415699998-------7545511125999155079189983497799999996320255446777678
Q 001734 626 GVQMVEIYNEQVRDLLSSDGP-------QRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNER 698 (1019)
Q Consensus 626 ~vS~lEIYnE~V~DLL~~~~~-------~~~l~i~~~~~~g~~vv~~~~~~vvss~eev~~ll~~g~~~R~~~sT~~N~~ 698 (1019)
.+||+|||||+|+|||++... ...+.++.++..+++++.+++...+.++++++.+|..|.++|++++|.||+.
T Consensus 190 ~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 269 (403)
T 4etp_A 190 NAEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANKLRSTASTASNEH 269 (403)
T ss_dssp EEEEEEEETTEEEETTCC--------CCSCCCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHHC--C----CHHHHH
T ss_pred EEEEEEEECCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999983661468567766554445667650368707999788368179991999999999999997344344547765
Q ss_pred CCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCC
Q ss_conf 8997416999999675389937875568885579965567732243699999986749999999999822899---8557
Q 001734 699 SSRSHSILTIHVRGTDLKNGAILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKNP---HVPY 775 (1019)
Q Consensus 699 SSRSH~IftI~V~~~~~~~~~~~~skL~lVDLAGSER~~ks~~~g~rlkEa~~INkSLsaLg~VI~aLa~k~~---hIPY 775 (1019)
|||||+||+|+|.+.+...+....|+|+|||||||||+.++++.|+|++|+++||+||++||+||.||+++.. ||||
T Consensus 270 SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPy 349 (403)
T 4etp_A 270 SSRSHSIFIIHLSGSNAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRHIPF 349 (403)
T ss_dssp HHTSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTSSCTTTSCCCG
T ss_pred CCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 67764279999998606889766899999979998644456770488999999878899999999998614689986774
Q ss_pred CCCHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 68612334320027764330467228998899998999999868306423644
Q 001734 776 RNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAERVSGVELGAA 828 (1019)
Q Consensus 776 RdSKLT~LLqdsLGGnskTlmI~~ISP~~~~~~ETLsTLrFA~Rvk~I~~~~~ 828 (1019)
||||||+||||||||||+|+|||||||+..+++||++||+||+||+.|++++.
T Consensus 350 RdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 350 RNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp GGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC-----
T ss_pred CCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 56668898798628996499999937963348999999999999710526789
No 2
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=1.00 E-value=1 Score=743.14 Aligned_cols=349 Identities=41% Similarity=0.623 Sum_probs=305.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEECCCCC--CCCCCEEEEECEEECCCCC
Q ss_conf 89999985555555541059878992028999876688851899678986999278888--9988513531305499987
Q 001734 475 YHVILAENRRLYNEVQDLKGNIRVYCRIRPFLPGQSKKQTTIEYIGENGELVVSNPLKQ--GKDNHRLFKFNKVFGPEAS 552 (1019)
Q Consensus 475 y~~~l~erRkL~N~iqeLKGnIRV~vRVRP~~~~e~~~~~~v~~~~~~~~i~i~~p~~~--~k~~~k~F~FD~VF~~~at 552 (1019)
++....+||+|||++||+||||||||||||+++.|.....++....++..+.+..+... .+...+.|.||+||+++++
T Consensus 40 l~~~~~~rr~l~n~~~~l~gnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~~ 119 (412)
T 3u06_A 40 LFQSNMERKELHNTVMDLRDNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSS 119 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEECCCCGGGTTSCBCEEEEEETTEEEEECCC-------CCCEEECSEEECTTCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEEECEECCCCCC
T ss_conf 99999999998878887179979999848998100267612899369987998057854456668637760868189997
Q ss_pred HHHHHHCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCCEEEEEEEEEE
Q ss_conf 47797211988999775765349841433788760330678999886421299999999998623-48803999999999
Q 001734 553 QEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESR-KNSILYEVGVQMVE 631 (1019)
Q Consensus 553 QeeVf~~~~pLI~svldG~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~~LF~~~~~~-~~~~~~~V~vS~lE 631 (1019)
|++||+.+.|+|+++|+|||+||||||||||||||||+|+ ++++|||||++++||..+... ...+.|.|.+||+|
T Consensus 120 Q~~Vf~~v~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~----~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~E 195 (412)
T 3u06_A 120 QSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV----PESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLE 195 (412)
T ss_dssp HHHHHTTTHHHHHHHHTTCCEEEEEESSTTSSHHHHHTEE----TTEECHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCC----CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE
T ss_conf 8899999999999997797447997458999971673677----887866789999999865342036834887778999
Q ss_pred EECCEEEECCCCCCCCCCCCCCCCC-CCCCEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 9635144156999987545511125-999155079189983497799999996320255446777678899741699999
Q 001734 632 IYNEQVRDLLSSDGPQRRLGIWNAT-LPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHV 710 (1019)
Q Consensus 632 IYnE~V~DLL~~~~~~~~l~i~~~~-~~g~~vv~~~~~~vvss~eev~~ll~~g~~~R~~~sT~~N~~SSRSH~IftI~V 710 (1019)
||||+|+|||++... .+.++... ..+++++.++++..+.++++++.+|..|.++|++++|.||+.|||||+||+|+|
T Consensus 196 IYnE~i~DLL~~~~~--~~~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v 273 (412)
T 3u06_A 196 IYNEVLYDLLSNEQK--DMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLEL 273 (412)
T ss_dssp EETTEEEETTCCSCC--CCCEEECSSCTTSEEETTCCCEECCSHHHHHHHHHHHHHHCC-----CHHHHTTCEEEEEEEE
T ss_pred EECCEEEECCCCCCC--CCEEEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE
T ss_conf 967745786788788--863553035899889736079994999999999999974354234679887767329999999
Q ss_pred EEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 96753899378755688855799655677322436999999867499999999998228998557686123343200277
Q 001734 711 RGTDLKNGAILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGG 790 (1019)
Q Consensus 711 ~~~~~~~~~~~~skL~lVDLAGSER~~ks~~~g~rlkEa~~INkSLsaLg~VI~aLa~k~~hIPYRdSKLT~LLqdsLGG 790 (1019)
.+.+...+....|+|+|||||||||.. .|.|++|+.+||+||++||+||.||+.++.||||||||||+||||||||
T Consensus 274 ~~~~~~~~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~LLqdsLgG 349 (412)
T 3u06_A 274 IGRHAEKQEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGG 349 (412)
T ss_dssp EEEETTTTEEEEEEEEEEECCCCCC--------------CTTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHHGGGTST
T ss_pred EEEECCCCCEEEEEEEEEECCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 997078897888999999899777677----6630476887758899999999998635888873243788988986189
Q ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 6433046722899889999899999986830642364445788
Q 001734 791 QAKTLMMVQLNPDVDSYSETISTLKFAERVSGVELGAARSNKE 833 (1019)
Q Consensus 791 nskTlmI~~ISP~~~~~~ETLsTLrFA~Rvk~I~~~~~k~~~~ 833 (1019)
||+|+|||||||+..+++||++||+||+||+.|++++++.|..
T Consensus 350 nskt~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~~~~~~~n~~ 392 (412)
T 3u06_A 350 NSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNRY 392 (412)
T ss_dssp TCEEEEEEEECCBGGGHHHHHHHHHHHHHHHHHCC--------
T ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9669999994897334899999999999974324666622335
No 3
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=723.11 Aligned_cols=343 Identities=43% Similarity=0.639 Sum_probs=299.3
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC-CEEEE-------CCCCEEEEECCCCC--------CCCCCEEEEEC
Q ss_conf 8555555554105987899202899987668885-18996-------78986999278888--------99885135313
Q 001734 481 ENRRLYNEVQDLKGNIRVYCRIRPFLPGQSKKQT-TIEYI-------GENGELVVSNPLKQ--------GKDNHRLFKFN 544 (1019)
Q Consensus 481 erRkL~N~iqeLKGnIRV~vRVRP~~~~e~~~~~-~v~~~-------~~~~~i~i~~p~~~--------~k~~~k~F~FD 544 (1019)
..-+|||++|+++|||||||||||+++.|..... .+.+. .++..+.+..|... .....+.|.||
T Consensus 9 ~~~~~hn~~~~~~~~irV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~FD 88 (376)
T 2rep_A 9 HHSSGLVPRGSLKGNIRVFCRVRPVLPGEPTPPPGLLLFPSGPGGPSDPPTRLSLSRSDERRGTLSGAPAPPPRHDFSFD 88 (376)
T ss_dssp --------------CEEEEEEECCCCTTSCCCCGGGSBCCC------CCCCEEECCC-----------------CEEECS
T ss_pred CCCCCCCHHHCCCCCEEEEEECCCCCHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 33212321122689839999919789355056985499816766656788579994477654322566677874566524
Q ss_pred EEECCCCCHHHHHHCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCCEE
Q ss_conf 0549998747797211988999775765349841433788760330678999886421299999999998623-488039
Q 001734 545 KVFGPEASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESR-KNSILY 623 (1019)
Q Consensus 545 ~VF~~~atQeeVf~~~~pLI~svldG~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~~LF~~~~~~-~~~~~~ 623 (1019)
+||+++++|++||+++.|+|+++|+|||+||||||||||||||||+|++..+.+++|||||++++||..++.. ...+.|
T Consensus 89 ~Vf~~~~~Q~~Vy~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~ 168 (376)
T 2rep_A 89 RVFPPGSGQDEVFEEIAMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTY 168 (376)
T ss_dssp EEECTTCCHHHHHHHHHHHHHGGGGTCCEEEEEECSTTSSHHHHHTBCSSCCGGGBCHHHHHHHHHHHHHHHGGGGTEEE
T ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 78488655002345477788874389754999767899987068666888886658807999999999999744477289
Q ss_pred EEEEEEEEEECCEEEECCCCCC---CCCCCCCCCCC-CCCCEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 9999999996351441569999---87545511125-9991550791899834977999999963202554467776788
Q 001734 624 EVGVQMVEIYNEQVRDLLSSDG---PQRRLGIWNAT-LPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERS 699 (1019)
Q Consensus 624 ~V~vS~lEIYnE~V~DLL~~~~---~~~~l~i~~~~-~~g~~vv~~~~~~vvss~eev~~ll~~g~~~R~~~sT~~N~~S 699 (1019)
.|.+||+|||||+|+|||++.. ....+.++... ..+++++.++++..+.+++|++.+|..|.++|++++|.||+.|
T Consensus 169 ~v~vS~~EIYnE~i~DLL~~~~~~~~~~~l~ir~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~S 248 (376)
T 2rep_A 169 SFVASYVEIYNETVRDLLATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQNERS 248 (376)
T ss_dssp EEEEEEEEEETTEEEETTCCC--------CCEEEC---CCCEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC-----CG
T ss_pred EEEEEEEEEECCEEEECCCCCCCCCCCCCCEEEECCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99999999988886672444222356777237752378898797796799947899999999999743666224478877
Q ss_pred CCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99741699999967538993787556888557996556773224----36999999867499999999998228998557
Q 001734 700 SRSHSILTIHVRGTDLKNGAILRGSLHLIDLAGSERVDRSEATG----DRLREAQHINKSLSALGDVIFALAHKNPHVPY 775 (1019)
Q Consensus 700 SRSH~IftI~V~~~~~~~~~~~~skL~lVDLAGSER~~ks~~~g----~rlkEa~~INkSLsaLg~VI~aLa~k~~hIPY 775 (1019)
||||+||+|+|.+.+...+....|+|+|||||||||+.++++.| +|++|+.+||+||++||+||.||+.++.||||
T Consensus 249 SRSH~Ifti~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPY 328 (376)
T 2rep_A 249 SRSHSVFQLQISGEHSSRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPY 328 (376)
T ss_dssp GGSEEEEEEEEEEEESSSCCEEEEEEEEEECCCCC------------------------CHHHHHHHHHHHHTTCSCCCG
T ss_pred CCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 77549999999988369896777678999788775356556667654212367767608899999999998558983577
Q ss_pred CCCHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 686123343200277643304672289988999989999998683064
Q 001734 776 RNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAERVSGV 823 (1019)
Q Consensus 776 RdSKLT~LLqdsLGGnskTlmI~~ISP~~~~~~ETLsTLrFA~Rvk~I 823 (1019)
||||||+||||||||||+|+|||||||+..+++||++||+||+||+.|
T Consensus 329 RdSkLT~LLqdsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 329 RNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp GGSHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 578889998986189870999999698522399999999999997429
No 4
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=720.64 Aligned_cols=335 Identities=40% Similarity=0.662 Sum_probs=297.3
Q ss_pred HHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCEEEEECEEECCCCCHHHHHHCHHHHHHHHHC
Q ss_conf 41059878992028999876688851899678986999278888998851353130549998747797211988999775
Q 001734 490 QDLKGNIRVYCRIRPFLPGQSKKQTTIEYIGENGELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLDTRPLIRSVLD 569 (1019)
Q Consensus 490 qeLKGnIRV~vRVRP~~~~e~~~~~~v~~~~~~~~i~i~~p~~~~k~~~k~F~FD~VF~~~atQeeVf~~~~pLI~svld 569 (1019)
|||||||||||||||+++.|......+.+...+ .+.+..+...+ ..+.|.||+||+++++|++||+.+.|+|+++++
T Consensus 1 ee~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~f~FD~Vf~~~~~Q~~Vy~~~~~lv~~~l~ 77 (369)
T 3cob_A 1 EDMKGKIRVYCRLRPLCEKEIIAKERNAIRSVD-EFTVEHLWKDD--KAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVD 77 (369)
T ss_dssp ---CCBCEEEEEECCCCHHHHHTTCCBCEEECS-SSEEEEECTTS--CEEEEECSEEECTTCCHHHHHHTTTHHHHHHHT
T ss_pred CCCCCCEEEEEECCCCCHHHCCCCCCEEEECCC-CEEEEECCCCC--CCEEEECCEEECCCCCCCEEHHHHHHHHHHHHC
T ss_conf 988998499998799983454679837997699-67999337899--826886598989999731402213132576646
Q ss_pred CCCEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCCC-CC
Q ss_conf 76534984143378876033067899988642129999999999862348803999999999963514415699998-75
Q 001734 570 GYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLSSDGP-QR 648 (1019)
Q Consensus 570 G~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~V~DLL~~~~~-~~ 648 (1019)
|||+||||||||||||||||+|+ ..++||+||++++||..++.....+.|.|.+||+|||||+|+|||++... ..
T Consensus 78 G~n~tifAYGqTGSGKTyTM~G~----~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~ 153 (369)
T 3cob_A 78 GYNVCIFAYGQTGSGKTFTIYGA----DSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRL 153 (369)
T ss_dssp TCEEEEEEEECTTSSHHHHHTBC----SSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSCCC
T ss_pred CCCEEEEEECCCCCCCEEEECCC----CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCCCCC
T ss_conf 97159998789999883751179----98886258999999999874135752677899987707632345787556776
Q ss_pred CCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEE
Q ss_conf 45511125999155079189983497799999996320255446777678899741699999967538993787556888
Q 001734 649 RLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLKNGAILRGSLHLI 728 (1019)
Q Consensus 649 ~l~i~~~~~~g~~vv~~~~~~vvss~eev~~ll~~g~~~R~~~sT~~N~~SSRSH~IftI~V~~~~~~~~~~~~skL~lV 728 (1019)
.+.++.+. .+++++.++++..+.+++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+...+....|+|+||
T Consensus 154 ~l~i~e~~-~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lV 232 (369)
T 3cob_A 154 KLDIKKDS-KGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFV 232 (369)
T ss_dssp CCEEEECT-TSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEE
T ss_pred CEEEEECC-CCCEECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEE
T ss_conf 42789979-99888059879980899999999998752552303447787776338999999985278772788899999
Q ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCHH
Q ss_conf 55799655677322436999999867499999999998228998557686123343200277643304672289988999
Q 001734 729 DLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYS 808 (1019)
Q Consensus 729 DLAGSER~~ks~~~g~rlkEa~~INkSLsaLg~VI~aLa~k~~hIPYRdSKLT~LLqdsLGGnskTlmI~~ISP~~~~~~ 808 (1019)
|||||||+.++++.|.|++|+.+||+||++||+||.||+.++.||||||||||+||||||||||+|+|||||||+..+++
T Consensus 233 DLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ 312 (369)
T 3cob_A 233 DLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLD 312 (369)
T ss_dssp ECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHH
T ss_pred ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHH
T ss_conf 68878754434763023477878778899999999998648996787477778878876289852799999477200289
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 989999998683064236444578
Q 001734 809 ETISTLKFAERVSGVELGAARSNK 832 (1019)
Q Consensus 809 ETLsTLrFA~Rvk~I~~~~~k~~~ 832 (1019)
||++||+||+||+.|++.|..+..
T Consensus 313 ETl~TLrfA~rak~i~~~~~~n~~ 336 (369)
T 3cob_A 313 ETHNSLTYASRVRSIVNDPSKNVS 336 (369)
T ss_dssp HHHHHHHHHHHHHTCBCCCCCCEE
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999999998654567741578
No 5
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=1.00 E-value=1 Score=710.28 Aligned_cols=330 Identities=42% Similarity=0.680 Sum_probs=292.3
Q ss_pred HHCCCCEEEEEECCCCCCCCCCCCCCEEEE--C-CCC--EEEEECCCCCCCCCCEEEEECEEECCCCCHHHHHHCHHHHH
Q ss_conf 410598789920289998766888518996--7-898--69992788889988513531305499987477972119889
Q 001734 490 QDLKGNIRVYCRIRPFLPGQSKKQTTIEYI--G-ENG--ELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLDTRPLI 564 (1019)
Q Consensus 490 qeLKGnIRV~vRVRP~~~~e~~~~~~v~~~--~-~~~--~i~i~~p~~~~k~~~k~F~FD~VF~~~atQeeVf~~~~pLI 564 (1019)
.+|||||||||||||+++.|......+.+. . ..+ .+.+..+ .+....+.|.||+||+++++|++||+++.|+|
T Consensus 1 m~lkgnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~f~FD~Vf~~~~~Q~~vf~~v~~lv 78 (349)
T 3t0q_A 1 MALRGNIRVYCRVRPPLLNEPQDMSHILIEKFNEAKGAQSLTINRN--EGRILSYNFQFDMIFEPSHTNKEIFEEIRQLV 78 (349)
T ss_dssp ----CEEEEEEEECCCCTTSCCCCTTEEECCCBC--CBEEEEEEEC--C--CEEEEEEESEEECTTCCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEECCC--CCCCCCEEEECCEEECCCCCHHHHHHHHHHHH
T ss_conf 9989983899996979955223686378861267788438998478--88644146656879798766889999999999
Q ss_pred HHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHH-CCCCCEEEEEEEEEEEECCEEEECCCC
Q ss_conf 9977576534984143378876033067899988642129999999999862-348803999999999963514415699
Q 001734 565 RSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISES-RKNSILYEVGVQMVEIYNEQVRDLLSS 643 (1019)
Q Consensus 565 ~svldG~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~~LF~~~~~-~~~~~~~~V~vS~lEIYnE~V~DLL~~ 643 (1019)
+++|+|||+||||||||||||||||+|+ ++|||||++++||..++. ....+.|.|.+||+|||||+|+|||++
T Consensus 79 ~~~l~G~n~tifAYGqTGSGKTyTm~g~------~~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~ 152 (349)
T 3t0q_A 79 QSSLDGYNVCIFAYGQTGSGKTYTMLNA------GDGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRD 152 (349)
T ss_dssp HGGGTTCEEEEEEECSTTSSHHHHHHST------TTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC-
T ss_pred HHHHCCCCEEEEEECCCCCCCCEEECCC------CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHCCCCC
T ss_conf 9997795236888678999996375899------8844667999999999875504852689999999975601102356
Q ss_pred CC---------CCCCCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEE
Q ss_conf 99---------875455111259991550791899834977999999963202554467776788997416999999675
Q 001734 644 DG---------PQRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTD 714 (1019)
Q Consensus 644 ~~---------~~~~l~i~~~~~~g~~vv~~~~~~vvss~eev~~ll~~g~~~R~~~sT~~N~~SSRSH~IftI~V~~~~ 714 (1019)
.. ....+.++.++..+++++.++++..+.+++|++.+|..|.++|++++|.||+.|||||+||+|+|.+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~i~~~~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~ 232 (349)
T 3t0q_A 153 FKSHDNIDEILDSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRN 232 (349)
T ss_dssp --------------CCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHC------------CTGGGSEEEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEE
T ss_conf 45445422235666640589669898897198799948999999999999973760234564546775258999999773
Q ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCCCCCHHHHHHHHCCCCC
Q ss_conf 38993787556888557996556773224369999998674999999999982289---985576861233432002776
Q 001734 715 LKNGAILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKN---PHVPYRNSKLTQVLQSSLGGQ 791 (1019)
Q Consensus 715 ~~~~~~~~skL~lVDLAGSER~~ks~~~g~rlkEa~~INkSLsaLg~VI~aLa~k~---~hIPYRdSKLT~LLqdsLGGn 791 (1019)
...+....|+|+|||||||||+.++++.|+|++|+++||+||++||+||.||++++ .||||||||||+|||||||||
T Consensus 233 ~~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGn 312 (349)
T 3t0q_A 233 LHTGETSQGKLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQYSLVGD 312 (349)
T ss_dssp TTTCCEEEEEEEEEECCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCCCGGGSHHHHHHGGGSSTT
T ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC
T ss_conf 58898657999999489987544456753100557765174999999999985536888857774788889889863899
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 433046722899889999899999986830642364
Q 001734 792 AKTLMMVQLNPDVDSYSETISTLKFAERVSGVELGA 827 (1019)
Q Consensus 792 skTlmI~~ISP~~~~~~ETLsTLrFA~Rvk~I~~~~ 827 (1019)
|+|+|||||||+..+++||++||+||+||+.|++++
T Consensus 313 skt~mi~~vsP~~~~~~ETl~TL~fA~rv~~ik~~~ 348 (349)
T 3t0q_A 313 SKTLMFVNIPPDPNHISETLNSLRFASKVNSTKIAK 348 (349)
T ss_dssp CEEEEEEEECCCGGGHHHHHHHHHHHHHHHC-----
T ss_pred CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 649999980886213999999999999860163479
No 6
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=1.00 E-value=1 Score=701.80 Aligned_cols=329 Identities=42% Similarity=0.656 Sum_probs=289.3
Q ss_pred CCCCEEEEEECCCCCC-CCCCCCCCEEEEC---CCC--EEEEECCCCCCCCCCEEEEECEEECCCCCHHHHHHCHHHHHH
Q ss_conf 0598789920289998-7668885189967---898--699927888899885135313054999874779721198899
Q 001734 492 LKGNIRVYCRIRPFLP-GQSKKQTTIEYIG---ENG--ELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLDTRPLIR 565 (1019)
Q Consensus 492 LKGnIRV~vRVRP~~~-~e~~~~~~v~~~~---~~~--~i~i~~p~~~~k~~~k~F~FD~VF~~~atQeeVf~~~~pLI~ 565 (1019)
|||||||||||||+++ .|......+.+.. ..+ .+.+..+. .....+.|.||+||+++++|++||+++.|+|+
T Consensus 1 lk~nIrV~vRvRP~~~~~e~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~f~FD~Vf~~~~~Q~~Vy~~v~~lv~ 78 (347)
T 1f9v_A 1 MRGNIRVYCRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQ--NTAQVHEFKFDKIFDQQDTNVDVFKEVGQLVQ 78 (347)
T ss_dssp --CEEEEEEEECCCCTTTCCCTTEEEEECCCBTTTTBEEEEEEEGG--GTTCEEEEEESEEECTTCCHHHHHHHHHHHHG
T ss_pred CCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCC--CCCCCEEEEECEEECCCCCHHHHHHHHHHHHH
T ss_conf 9988299998189993225678864898324678884589994688--88673598609798998878899999988777
Q ss_pred HHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCCEEEEEEEEEEEECCEEEECCCCC
Q ss_conf 9775765349841433788760330678999886421299999999998623-488039999999999635144156999
Q 001734 566 SVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESR-KNSILYEVGVQMVEIYNEQVRDLLSSD 644 (1019)
Q Consensus 566 svldG~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~~LF~~~~~~-~~~~~~~V~vS~lEIYnE~V~DLL~~~ 644 (1019)
++|+|||+||||||||||||||||+|+ ++|||||++++||..++.. ...+.|.|++||+|||||+|+|||++.
T Consensus 79 ~~l~G~n~tifAYGqTGSGKTyTM~G~------~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~ 152 (347)
T 1f9v_A 79 SSLDGYNVCIFAYGQTGSGKTFTMLNP------GDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSD 152 (347)
T ss_dssp GGGGTCCEEEEEECCTTSSHHHHHHST------TTSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC--
T ss_pred HHCCCCEEEEEEECCCCCCCCEECCCC------CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEECCCCC
T ss_conf 750780468997778999886764479------88725789999999998645137742899999999778631445775
Q ss_pred CC-------CCCCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC
Q ss_conf 98-------75455111259991550791899834977999999963202554467776788997416999999675389
Q 001734 645 GP-------QRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLKN 717 (1019)
Q Consensus 645 ~~-------~~~l~i~~~~~~g~~vv~~~~~~vvss~eev~~ll~~g~~~R~~~sT~~N~~SSRSH~IftI~V~~~~~~~ 717 (1019)
.. ...+.++.++..++.++.++++..+.++++++.+|..|.++|++++|.||+.|||||+||+|+|.+.+...
T Consensus 153 ~~~~~~~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~ 232 (347)
T 1f9v_A 153 NNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNAKT 232 (347)
T ss_dssp -----------CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEECC--
T ss_pred CCCCCCCCCCCCEEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEEEEEECCCC
T ss_conf 66543334577426899648995596288899829999999999999733534204688887776699999999853787
Q ss_pred CCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 93787556888557996556773224369999998674999999999982289---985576861233432002776433
Q 001734 718 GAILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKN---PHVPYRNSKLTQVLQSSLGGQAKT 794 (1019)
Q Consensus 718 ~~~~~skL~lVDLAGSER~~ks~~~g~rlkEa~~INkSLsaLg~VI~aLa~k~---~hIPYRdSKLT~LLqdsLGGnskT 794 (1019)
+....|+|+|||||||||+.++++.|+|++|+.+||+||++||+||.||++++ .||||||||||+||||||||||+|
T Consensus 233 ~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt 312 (347)
T 1f9v_A 233 GAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKT 312 (347)
T ss_dssp CCEEEEEEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHHHHHHHSTTCEE
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf 85546679999788885444456622454778787389999999999986366778867642678899999872898609
Q ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 0467228998899998999999868306423644
Q 001734 795 LMMVQLNPDVDSYSETISTLKFAERVSGVELGAA 828 (1019)
Q Consensus 795 lmI~~ISP~~~~~~ETLsTLrFA~Rvk~I~~~~~ 828 (1019)
+|||||||+..+++||++||+||+||++|++++.
T Consensus 313 ~mI~~vsP~~~~~~ETl~TLrfA~r~~~i~~~~r 346 (347)
T 1f9v_A 313 LMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 346 (347)
T ss_dssp EEEEEECCSGGGHHHHHHHHHHHHHHCCTTTC--
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9999968840038999999999999740006789
No 7
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=700.39 Aligned_cols=351 Identities=38% Similarity=0.559 Sum_probs=299.5
Q ss_pred HCCCCEEEEEECCCCCCCCCCCC--CCEEEECC--CCEEEEECCCCCCCCCCEEEEECEEECCCCCHHHHHHC-HHHHHH
Q ss_conf 10598789920289998766888--51899678--98699927888899885135313054999874779721-198899
Q 001734 491 DLKGNIRVYCRIRPFLPGQSKKQ--TTIEYIGE--NGELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLD-TRPLIR 565 (1019)
Q Consensus 491 eLKGnIRV~vRVRP~~~~e~~~~--~~v~~~~~--~~~i~i~~p~~~~k~~~k~F~FD~VF~~~atQeeVf~~-~~pLI~ 565 (1019)
..++||||||||||+++.|.... .++.+.+. +..+.+ ..+.|.||+||+++++|++||+. +.|+|+
T Consensus 8 ~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~---------~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~ 78 (365)
T 2y65_A 8 PAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISI---------AGKVYLFDKVFKPNASQEKVYNEAAKSIVT 78 (365)
T ss_dssp CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEE---------TTEEEECSEEECTTCCHHHHHHHHTHHHHH
T ss_pred CCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCEEEE---------CCEEEECCEEECCCCCHHHHHHHHHHHHHH
T ss_conf 89999599999496994673159925999479987767998---------998986746964789989999986303779
Q ss_pred HHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCC
Q ss_conf 97757653498414337887603306789998864212999999999986234880399999999996351441569999
Q 001734 566 SVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLSSDG 645 (1019)
Q Consensus 566 svldG~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~V~DLL~~~~ 645 (1019)
++|+|||+||||||||||||||||+|+.. ++..+|||||++++||..+......+.|.|.+||+|||||+|+|||++..
T Consensus 79 ~~l~G~n~tifAYGqTGSGKTyTm~G~~~-~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~ 157 (365)
T 2y65_A 79 DVLAGYNGTIFAYGQTSSGKTHTMEGVIG-DSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSK 157 (365)
T ss_dssp HHHTTCCEEEEEECSTTSSHHHHHTBSTT-CTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTC
T ss_pred HHHCCCCEEEEEECCCCCCCCEEEECCCC-CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCC
T ss_conf 98679824898345899999648866888-75557737799999999998336895399999999998772126225876
Q ss_pred CCCCCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEE
Q ss_conf 87545511125999155079189983497799999996320255446777678899741699999967538993787556
Q 001734 646 PQRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLKNGAILRGSL 725 (1019)
Q Consensus 646 ~~~~l~i~~~~~~g~~vv~~~~~~vvss~eev~~ll~~g~~~R~~~sT~~N~~SSRSH~IftI~V~~~~~~~~~~~~skL 725 (1019)
..+.++.+. .++.++.++++..+.+++|++.+|..|.++|++++|.||+.|||||+||+|+|.+.+...+....|+|
T Consensus 158 --~~l~i~e~~-~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL 234 (365)
T 2y65_A 158 --VNLSVHEDK-NRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKL 234 (365)
T ss_dssp --CSBCEEECS-SSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTTCCEEEEEE
T ss_pred --CCCEEEECC-CCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEE
T ss_conf --772378879-99878427889965879999999999986466523568887887639999999997058887868999
Q ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCC
Q ss_conf 88855799655677322436999999867499999999998228-99855768612334320027764330467228998
Q 001734 726 HLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHK-NPHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDV 804 (1019)
Q Consensus 726 ~lVDLAGSER~~ks~~~g~rlkEa~~INkSLsaLg~VI~aLa~k-~~hIPYRdSKLT~LLqdsLGGnskTlmI~~ISP~~ 804 (1019)
+|||||||||+.++++.|.|++|+.+||+||++||+||.||+.+ ..||||||||||+||||||||||+|+||+||||+.
T Consensus 235 ~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~ 314 (365)
T 2y65_A 235 YLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPAS 314 (365)
T ss_dssp EEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBG
T ss_pred EEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
T ss_conf 99979998820121895224789988888899999899998527888786635788898776138996379999846752
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999899999986830642364445788201999999999799999989999999999986
Q 001734 805 DSYSETISTLKFAERVSGVELGAARSNKEGSDVRELMEQVGSLKDIITKKDEEIERLQVLKA 866 (1019)
Q Consensus 805 ~~~~ETLsTLrFA~Rvk~I~~~~~k~~~~~~~v~eL~~qv~~Lk~~i~~~~eei~~lq~l~~ 866 (1019)
.+++||++||+||+||+.|++.+..+..... .++ +.++++++++++.|+.
T Consensus 315 ~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~--~~~----------~~~~~~e~~~~~~L~~ 364 (365)
T 2y65_A 315 FNESETKSTLDFGRRAKTVKNVVCVNEELTA--EEW----------KRRYEKEKEKNARLKG 364 (365)
T ss_dssp GGHHHHHHHHHHHHHHTTCEEECCCEEECCS--HHH----------HHC-------------
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCEECCCCCH--HHH----------HHHHHHHHHHHHHHHC
T ss_conf 7889999999999997215675411788999--999----------9999999999998511
No 8
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=699.43 Aligned_cols=341 Identities=38% Similarity=0.589 Sum_probs=301.4
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCCC--CCCCEEEECCCCEEEEECCCCCCCCCCEEEEECEEECCCCCHHHHHHC-HHHH
Q ss_conf 5554105987899202899987668--885189967898699927888899885135313054999874779721-1988
Q 001734 487 NEVQDLKGNIRVYCRIRPFLPGQSK--KQTTIEYIGENGELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLD-TRPL 563 (1019)
Q Consensus 487 N~iqeLKGnIRV~vRVRP~~~~e~~--~~~~v~~~~~~~~i~i~~p~~~~k~~~k~F~FD~VF~~~atQeeVf~~-~~pL 563 (1019)
+..++.+++|||||||||+++.|.. ...++.+.+.++.+.+.+|........+.|.||+||+++++|++||+. +.|+
T Consensus 14 ~~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~pl 93 (372)
T 3b6u_A 14 LYFQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAKQFELYDETFRPL 93 (372)
T ss_dssp -------CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECSEEECTTCCHHHHHHHTHHHH
T ss_pred CCCCCCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHH
T ss_conf 76678999839999869899355304996389995899879997788777778438876869688674178988787777
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCC
Q ss_conf 99977576534984143378876033067899988642129999999999862348803999999999963514415699
Q 001734 564 IRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLSS 643 (1019)
Q Consensus 564 I~svldG~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~V~DLL~~ 643 (1019)
|+++|+|||+||||||||||||||||+|+.. ++.++|||||++++||..+.. ...+.|.|++||+|||||+|+|||++
T Consensus 94 v~~~l~G~n~tifAYGqTGSGKTyTM~G~~~-~~~~~Giipr~~~~lF~~i~~-~~~~~~~v~vS~~EIYnE~i~DLL~~ 171 (372)
T 3b6u_A 94 VDSVLQGFNGTIFAYGQTGTGKTYTMEGIRG-DPEKRGVIPNSFDHIFTHISR-SQNQQYLVRASYLEIYQEEIRDLLSK 171 (372)
T ss_dssp HHHHHTTCCEEEEEEESTTSSHHHHHTBCTT-SGGGBCHHHHHHHHHHHHHHT-CSSCEEEEEEEEEEEETTEEEETTSS
T ss_pred HHHHHCCCEEEEEEECCCCCCCCEEEECCCC-CCCCCCCHHHHHHHHHHHHHH-CCCCCEEEEEEEEEEECCEEEECCCC
T ss_conf 8998679813588656899999875755899-834488188999999998651-45773699998999967888997789
Q ss_pred CCCCCCCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECC---CCCE
Q ss_conf 9987545511125999155079189983497799999996320255446777678899741699999967538---9937
Q 001734 644 DGPQRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLK---NGAI 720 (1019)
Q Consensus 644 ~~~~~~l~i~~~~~~g~~vv~~~~~~vvss~eev~~ll~~g~~~R~~~sT~~N~~SSRSH~IftI~V~~~~~~---~~~~ 720 (1019)
.. ...+.++++. .+++++.++++..+.+++|++.+|..|.++|++++|.||+.|||||+||+|+|.+.+.. ....
T Consensus 172 ~~-~~~l~i~e~~-~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~ 249 (372)
T 3b6u_A 172 DQ-TKRLELKERP-DTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHI 249 (372)
T ss_dssp CT-TCCBCEEEET-TTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----CCCE
T ss_pred CC-CCCCEEEECC-CCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCE
T ss_conf 77-7773689879-996752898899926799999999999976672545577877764299999999960477887626
Q ss_pred EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 87556888557996556773224369999998674999999999982289-98557686123343200277643304672
Q 001734 721 LRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKN-PHVPYRNSKLTQVLQSSLGGQAKTLMMVQ 799 (1019)
Q Consensus 721 ~~skL~lVDLAGSER~~ks~~~g~rlkEa~~INkSLsaLg~VI~aLa~k~-~hIPYRdSKLT~LLqdsLGGnskTlmI~~ 799 (1019)
..|+|+|||||||||+.++++.|.|++|+.+||+||++||+||.||++++ .||||||||||+||||||||||+|+||+|
T Consensus 250 ~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~ 329 (372)
T 3b6u_A 250 RVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVAN 329 (372)
T ss_dssp EEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEEEEEEE
T ss_pred EEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEE
T ss_conf 78899999798876554457515431467565064999999999986389887866220889999986299954899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 28998899998999999868306423644457
Q 001734 800 LNPDVDSYSETISTLKFAERVSGVELGAARSN 831 (1019)
Q Consensus 800 ISP~~~~~~ETLsTLrFA~Rvk~I~~~~~k~~ 831 (1019)
|||+..+++||++||+||+||+.|++.|..+.
T Consensus 330 vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~ 361 (372)
T 3b6u_A 330 VGPASYNVEETLTTLRYANRAKNIKNKPRVNE 361 (372)
T ss_dssp ECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHCCCCCEECC
T ss_conf 68852479999999999999864556662557
No 9
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=699.05 Aligned_cols=338 Identities=38% Similarity=0.578 Sum_probs=288.3
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCCC--CCCCEEEECCCCEEEEECCCCCC-----------CCCCEEEEECEEECC----
Q ss_conf 5554105987899202899987668--88518996789869992788889-----------988513531305499----
Q 001734 487 NEVQDLKGNIRVYCRIRPFLPGQSK--KQTTIEYIGENGELVVSNPLKQG-----------KDNHRLFKFNKVFGP---- 549 (1019)
Q Consensus 487 N~iqeLKGnIRV~vRVRP~~~~e~~--~~~~v~~~~~~~~i~i~~p~~~~-----------k~~~k~F~FD~VF~~---- 549 (1019)
+...++++||||||||||+++.|.. ..+.+.+.+....+.+..|.... ....+.|+||+||++
T Consensus 31 ~~~~~~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~ 110 (443)
T 2owm_A 31 FVSKDPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTE 110 (443)
T ss_dssp ---CCCCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTT
T ss_pred CCCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCC
T ss_conf 76678998949999939999688626994599975898627995588765433333212336677268527382787767
Q ss_pred ---CCCHHHHHHC-HHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC---CCCCE
Q ss_conf ---9874779721-1988999775765349841433788760330678999886421299999999998623---48803
Q 001734 550 ---EASQEEVFLD-TRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESR---KNSIL 622 (1019)
Q Consensus 550 ---~atQeeVf~~-~~pLI~svldG~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~~LF~~~~~~---~~~~~ 622 (1019)
.++|++||+. +.|+|+++|+|||+||||||||||||||||+|+ .+++|||||++++||..++.. ...+.
T Consensus 111 ~~~~asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~----~~~~GIipr~~~~lF~~i~~~~~~~~~~~ 186 (443)
T 2owm_A 111 DEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGT----PDQPGLIPRTCEDLFQRIASAQDETPNIS 186 (443)
T ss_dssp STTCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCC----TTSCCHHHHHHHHHHHHHHHTTTTSTTCE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECC----CCCCCHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 76578799998763246888863687427998678899998886468----77775379999999998876521367734
Q ss_pred EEEEEEEEEEECCEEEECCCCCC---CCCCCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99999999996351441569999---875455111259991550791899834977999999963202554467776788
Q 001734 623 YEVGVQMVEIYNEQVRDLLSSDG---PQRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERS 699 (1019)
Q Consensus 623 ~~V~vS~lEIYnE~V~DLL~~~~---~~~~l~i~~~~~~g~~vv~~~~~~vvss~eev~~ll~~g~~~R~~~sT~~N~~S 699 (1019)
|.|+|||+|||||+|+|||++.. +...+.++++.. +++++.++++..+.+++|++.+|..|.++|++++|.||+.|
T Consensus 187 ~~V~vS~lEIYnE~i~DLL~~~~~~~~~~~l~ire~~~-~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~S 265 (443)
T 2owm_A 187 YNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPT-EGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTS 265 (443)
T ss_dssp EEEEEEEEEEETTEEEETTSCCCSSCCCCCCEEEEETT-TEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBC
T ss_pred EEEEEEEEEEECCEEEECCCCCCCCCCCCCCCEEECCC-CCEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99999999998897568567634578653443037799-99952687799828999999999999733786337587766
Q ss_pred CCCCCEEEEEEEEEECC----CCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----
Q ss_conf 99741699999967538----993787556888557996556773224369999998674999999999982289-----
Q 001734 700 SRSHSILTIHVRGTDLK----NGAILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKN----- 770 (1019)
Q Consensus 700 SRSH~IftI~V~~~~~~----~~~~~~skL~lVDLAGSER~~ks~~~g~rlkEa~~INkSLsaLg~VI~aLa~k~----- 770 (1019)
||||+||+|+|.+.... ......|+|+|||||||||+.++++.|+|++|+.+||+||++||+||.||+++.
T Consensus 266 SRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~ 345 (443)
T 2owm_A 266 SRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASR 345 (443)
T ss_dssp TTEEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHHHHHHCC-------
T ss_pred CCCEEEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 77719999999986035678874068877999979887535656776641211001057899999999998604555554
Q ss_pred -----------------CCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf -----------------9855768612334320027764330467228998899998999999868306423644457
Q 001734 771 -----------------PHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAERVSGVELGAARSN 831 (1019)
Q Consensus 771 -----------------~hIPYRdSKLT~LLqdsLGGnskTlmI~~ISP~~~~~~ETLsTLrFA~Rvk~I~~~~~k~~ 831 (1019)
.||||||||||+||||+|||||+|+|||||||+ +++||++||+||+||+.|++.+..+.
T Consensus 346 ~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~vN~ 421 (443)
T 2owm_A 346 PSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAVVNQ 421 (443)
T ss_dssp ------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEECC
T ss_conf 44322234333445677745574547688888862799708999981643--07899999999999854456333513
No 10
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=1.00 E-value=1 Score=698.27 Aligned_cols=339 Identities=35% Similarity=0.571 Sum_probs=292.4
Q ss_pred HHCCCCEEEEEECCCCCCCCCC--CCCCEEEECCCCEEEEECCCCCCCCCCEEEEECEEECCCCCHHHHHHC-HHHHHHH
Q ss_conf 4105987899202899987668--885189967898699927888899885135313054999874779721-1988999
Q 001734 490 QDLKGNIRVYCRIRPFLPGQSK--KQTTIEYIGENGELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLD-TRPLIRS 566 (1019)
Q Consensus 490 qeLKGnIRV~vRVRP~~~~e~~--~~~~v~~~~~~~~i~i~~p~~~~k~~~k~F~FD~VF~~~atQeeVf~~-~~pLI~s 566 (1019)
++.++||||+|||||+++.|.. ...++.+.+....+.+..+........+.|.||+||+++++|++||+. +.|+|++
T Consensus 4 ~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~ 83 (359)
T 1x88_A 4 EEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDE 83 (359)
T ss_dssp -----CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEETTEEEEEEEECSEEECTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEECEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 78999859999908999256304996499975998579983787667767448754079852674537899998886898
Q ss_pred HHCCCCEEEEEECCCCCCCCEEEECCCCCC-------CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEE
Q ss_conf 775765349841433788760330678999-------8864212999999999986234880399999999996351441
Q 001734 567 VLDGYNVCIFAYGQTGSGKTYTMSGPCISS-------TEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRD 639 (1019)
Q Consensus 567 vldG~N~tIfAYGqTGSGKTyTM~G~~~~~-------~~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~V~D 639 (1019)
+|+|||+||||||||||||||||+|+.... ...+|||||++++||..+.. ..+.|.|++||+|||||+|+|
T Consensus 84 ~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~--~~~~~~v~vS~~EIYnE~i~D 161 (359)
T 1x88_A 84 VIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTD--NGTEFSVKVSLLEIYNEELFD 161 (359)
T ss_dssp HHTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSS--SSEEEEEEEEEEEEETTEEEE
T ss_pred HHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCEEEEEEEEEEEECCEEEE
T ss_conf 737982489984789998756885667766544444566687038999999987741--582599999999995761001
Q ss_pred CCCCCCCC-CCCCCCCCCC-CCCEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECC-
Q ss_conf 56999987-5455111259-99155079189983497799999996320255446777678899741699999967538-
Q 001734 640 LLSSDGPQ-RRLGIWNATL-PNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLK- 716 (1019)
Q Consensus 640 LL~~~~~~-~~l~i~~~~~-~g~~vv~~~~~~vvss~eev~~ll~~g~~~R~~~sT~~N~~SSRSH~IftI~V~~~~~~- 716 (1019)
||++.... ..+.++.+.. .+++++.++++..+.+++|++.+|..|.++|++++|.||+.|||||+||+|+|...+..
T Consensus 162 LL~~~~~~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~ 241 (359)
T 1x88_A 162 LLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTI 241 (359)
T ss_dssp TTCTTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECT
T ss_pred HHCCCCCCCCCCEEEECCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCC
T ss_conf 21156555666058865577898898287899849999999999987751461225477877776289999998743557
Q ss_pred CC--CEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 99--3787556888557996556773224369999998674999999999982289985576861233432002776433
Q 001734 717 NG--AILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKT 794 (1019)
Q Consensus 717 ~~--~~~~skL~lVDLAGSER~~ks~~~g~rlkEa~~INkSLsaLg~VI~aLa~k~~hIPYRdSKLT~LLqdsLGGnskT 794 (1019)
.+ ....|+|+|||||||||+.++++.|.|++|+.+||+||++||+||.||+.+..||||||||||+||||||||||+|
T Consensus 242 ~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt 321 (359)
T 1x88_A 242 DGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRT 321 (359)
T ss_dssp TSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGSSSSSEE
T ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEE
T ss_conf 88713778899998189987354358863201777653078999999999986479977622566889999975899729
Q ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 046722899889999899999986830642364445
Q 001734 795 LMMVQLNPDVDSYSETISTLKFAERVSGVELGAARS 830 (1019)
Q Consensus 795 lmI~~ISP~~~~~~ETLsTLrFA~Rvk~I~~~~~k~ 830 (1019)
+||+||||+..+++||++||+||+||+.|++.|..+
T Consensus 322 ~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn 357 (359)
T 1x88_A 322 SIIATISPASLNLEETLSTLEYAHRAKNILNKPEVN 357 (359)
T ss_dssp EEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC--
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEC
T ss_conf 999997897456899999999999986566766147
Done!