Query 001736
Match_columns 1019
No_of_seqs 160 out of 253
Neff 4.1
Searched_HMMs 46136
Date Fri Mar 29 08:06:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001736.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001736hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd00839 MPP_PAPs purple acid p 99.9 4.6E-24 1E-28 226.6 17.7 222 379-643 2-243 (294)
2 cd07378 MPP_ACP5 Homo sapiens 99.9 3.4E-24 7.5E-29 226.1 16.6 216 382-644 1-238 (277)
3 PTZ00422 glideosome-associated 99.9 1.3E-23 2.8E-28 235.8 17.3 221 377-642 22-281 (394)
4 PLN02533 probable purple acid 99.9 6.1E-23 1.3E-27 233.2 19.3 210 377-640 135-361 (427)
5 KOG1378 Purple acid phosphatas 99.8 3E-20 6.5E-25 210.2 18.3 216 378-645 144-388 (452)
6 KOG2679 Purple (tartrate-resis 99.7 7.5E-18 1.6E-22 180.1 12.6 225 376-649 38-285 (336)
7 cd07395 MPP_CSTP1 Homo sapiens 99.7 2.3E-16 5.1E-21 166.4 18.1 179 420-640 47-237 (262)
8 cd07396 MPP_Nbla03831 Homo sap 99.7 9.3E-16 2E-20 163.6 17.6 136 486-639 75-246 (267)
9 cd07402 MPP_GpdQ Enterobacter 99.7 7.3E-16 1.6E-20 159.1 16.2 169 421-641 39-214 (240)
10 PRK11148 cyclic 3',5'-adenosin 99.6 2.3E-14 4.9E-19 153.4 17.1 199 378-639 11-225 (275)
11 cd07401 MPP_TMEM62_N Homo sapi 99.6 3E-14 6.4E-19 151.9 14.3 128 485-621 77-217 (256)
12 cd07399 MPP_YvnB Bacillus subt 99.5 2E-13 4.4E-18 141.9 14.0 127 421-619 34-166 (214)
13 cd00842 MPP_ASMase acid sphing 99.5 2E-13 4.2E-18 146.9 12.7 167 421-616 67-263 (296)
14 PF00149 Metallophos: Calcineu 99.5 6.8E-14 1.5E-18 127.4 6.2 193 382-614 1-200 (200)
15 cd07393 MPP_DR1119 Deinococcus 99.4 1.5E-12 3.2E-17 136.9 13.8 135 483-636 71-225 (232)
16 COG1409 Icc Predicted phosphoh 99.3 3.1E-11 6.7E-16 126.1 15.5 178 383-614 2-193 (301)
17 cd08163 MPP_Cdc1 Saccharomyces 99.3 5.6E-11 1.2E-15 127.9 15.1 121 485-620 85-234 (257)
18 cd07383 MPP_Dcr2 Saccharomyces 99.2 8.2E-11 1.8E-15 120.1 12.2 77 542-618 88-180 (199)
19 cd07392 MPP_PAE1087 Pyrobaculu 99.2 1.8E-10 3.9E-15 113.9 13.6 142 422-615 23-174 (188)
20 PRK11340 phosphodiesterase Yae 99.2 5E-10 1.1E-14 120.7 16.6 197 379-649 47-262 (271)
21 cd07385 MPP_YkuE_C Bacillus su 99.1 1.1E-09 2.4E-14 112.3 15.3 198 381-649 1-215 (223)
22 TIGR03767 P_acnes_RR metalloph 99.1 7.9E-09 1.7E-13 119.7 20.3 126 522-650 291-430 (496)
23 TIGR03729 acc_ester putative p 99.0 1.8E-09 3.8E-14 113.7 11.9 63 548-615 149-222 (239)
24 cd07388 MPP_Tt1561 Thermus the 98.9 1.9E-08 4.2E-13 106.9 16.4 174 382-613 5-190 (224)
25 cd07400 MPP_YydB Bacillus subt 98.8 2.7E-08 5.9E-13 95.9 9.0 50 569-619 81-130 (144)
26 cd07404 MPP_MS158 Microscilla 98.7 3.7E-08 8E-13 97.6 9.6 52 566-617 97-152 (166)
27 cd00840 MPP_Mre11_N Mre11 nucl 98.7 7.1E-08 1.5E-12 98.2 9.4 123 485-617 77-204 (223)
28 TIGR03768 RPA4764 metallophosp 98.6 5.5E-07 1.2E-11 104.2 15.5 91 524-616 294-414 (492)
29 COG1408 Predicted phosphohydro 98.6 2.1E-07 4.5E-12 102.3 11.5 209 377-649 40-273 (284)
30 cd00838 MPP_superfamily metall 98.6 2.1E-07 4.5E-12 84.6 9.6 50 569-619 70-120 (131)
31 cd07379 MPP_239FB Homo sapiens 98.4 1.1E-06 2.3E-11 84.9 9.0 48 565-615 67-117 (135)
32 cd07384 MPP_Cdc1_like Saccharo 98.0 1.6E-05 3.4E-10 81.1 8.2 35 569-621 119-153 (171)
33 cd08166 MPP_Cdc1_like_1 unchar 98.0 2E-05 4.3E-10 82.8 8.6 43 569-621 112-154 (195)
34 PF09423 PhoD: PhoD-like phosp 97.8 0.0001 2.2E-09 85.2 11.9 92 521-614 252-377 (453)
35 cd07397 MPP_DevT Myxococcus xa 97.7 0.00062 1.4E-08 73.7 14.4 58 561-618 142-212 (238)
36 cd08164 MPP_Ted1 Saccharomyces 97.6 8.8E-05 1.9E-09 78.0 6.7 32 569-618 129-160 (193)
37 cd08165 MPP_MPPE1 human MPPE1 97.6 0.00013 2.8E-09 73.4 7.4 34 569-620 107-140 (156)
38 COG2129 Predicted phosphoester 97.5 0.0023 5.1E-08 68.8 15.7 179 381-620 3-193 (226)
39 cd07403 MPP_TTHA0053 Thermus t 97.4 0.00067 1.4E-08 66.1 9.4 49 567-618 57-107 (129)
40 cd00841 MPP_YfcE Escherichia c 97.4 0.00059 1.3E-08 66.9 8.6 59 565-639 74-132 (155)
41 cd00845 MPP_UshA_N_like Escher 97.4 0.0067 1.4E-07 64.2 16.8 119 484-617 70-209 (252)
42 cd07406 MPP_CG11883_N Drosophi 97.4 0.0043 9.3E-08 67.0 15.5 133 487-642 73-228 (257)
43 PF12850 Metallophos_2: Calcin 97.4 0.00045 9.8E-09 66.6 7.0 60 565-639 80-139 (156)
44 COG1768 Predicted phosphohydro 97.3 0.0037 8E-08 65.6 13.5 48 564-619 157-204 (230)
45 PF14582 Metallophos_3: Metall 97.3 0.00058 1.3E-08 73.7 7.9 164 422-613 32-217 (255)
46 TIGR01854 lipid_A_lpxH UDP-2,3 97.2 0.0032 7E-08 66.7 12.3 34 600-636 183-216 (231)
47 KOG1432 Predicted DNA repair e 97.2 0.01 2.2E-07 67.4 16.3 194 377-613 49-310 (379)
48 PRK05340 UDP-2,3-diacylglucosa 97.2 0.0017 3.8E-08 69.1 9.9 18 600-617 185-202 (241)
49 TIGR00040 yfcE phosphoesterase 97.0 0.0027 5.9E-08 63.0 8.7 14 600-613 104-117 (158)
50 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.0 0.01 2.3E-07 65.1 13.8 51 565-618 164-233 (262)
51 cd07410 MPP_CpdB_N Escherichia 97.0 0.018 3.9E-07 62.5 15.2 123 488-616 86-232 (277)
52 cd07389 MPP_PhoD Bacillus subt 96.8 0.0064 1.4E-07 63.5 9.8 25 520-544 145-169 (228)
53 cd07411 MPP_SoxB_N Thermus the 96.8 0.025 5.5E-07 61.2 14.6 112 489-614 87-219 (264)
54 TIGR00619 sbcd exonuclease Sbc 96.8 0.0048 1E-07 66.8 8.6 18 485-502 76-93 (253)
55 TIGR00583 mre11 DNA repair pro 96.5 0.018 4E-07 66.8 12.1 41 566-615 201-241 (405)
56 cd07398 MPP_YbbF-LpxH Escheric 96.5 0.0028 6.1E-08 65.1 4.9 30 600-636 187-216 (217)
57 COG0420 SbcD DNA repair exonuc 96.4 0.0094 2E-07 67.7 8.6 52 422-501 40-92 (390)
58 cd07408 MPP_SA0022_N Staphyloc 96.4 0.11 2.5E-06 56.0 16.2 123 484-617 70-216 (257)
59 KOG3770 Acid sphingomyelinase 96.3 0.025 5.5E-07 67.8 11.7 98 518-618 301-409 (577)
60 COG2908 Uncharacterized protei 96.3 0.014 3.1E-07 63.4 8.7 30 600-636 185-214 (237)
61 PHA02546 47 endonuclease subun 96.2 0.042 9.2E-07 62.0 12.3 14 484-497 76-89 (340)
62 PRK10966 exonuclease subunit S 96.2 0.006 1.3E-07 70.6 5.3 23 485-507 75-97 (407)
63 cd07409 MPP_CD73_N CD73 ecto-5 96.0 0.17 3.7E-06 55.6 15.3 117 484-615 82-219 (281)
64 cd07394 MPP_Vps29 Homo sapiens 95.9 0.043 9.4E-07 56.6 9.5 16 600-615 104-119 (178)
65 cd07386 MPP_DNA_pol_II_small_a 95.7 0.1 2.2E-06 55.8 11.9 18 601-618 190-207 (243)
66 cd07382 MPP_DR1281 Deinococcus 95.1 0.7 1.5E-05 50.9 16.0 117 483-615 57-179 (255)
67 PRK09419 bifunctional 2',3'-cy 94.4 0.7 1.5E-05 60.4 16.1 188 380-615 659-883 (1163)
68 cd07425 MPP_Shelphs Shewanella 94.0 0.029 6.4E-07 59.2 2.1 49 421-496 31-79 (208)
69 cd07407 MPP_YHR202W_N Saccharo 93.9 0.95 2.1E-05 50.4 13.6 84 523-614 137-231 (282)
70 cd07390 MPP_AQ1575 Aquifex aeo 93.5 0.074 1.6E-06 53.9 4.0 37 564-618 105-141 (168)
71 PRK04036 DNA polymerase II sma 93.1 0.09 1.9E-06 62.7 4.4 53 379-433 241-295 (504)
72 cd07412 MPP_YhcR_N Bacillus su 93.0 4 8.7E-05 45.2 16.6 53 564-617 191-244 (288)
73 cd07405 MPP_UshA_N Escherichia 92.8 2.5 5.4E-05 46.8 14.8 51 564-616 173-223 (285)
74 cd07391 MPP_PF1019 Pyrococcus 92.7 0.094 2E-06 53.3 3.3 15 422-436 41-55 (172)
75 PRK09453 phosphodiesterase; Pr 92.4 0.18 3.9E-06 51.5 5.0 39 383-435 2-40 (182)
76 cd07380 MPP_CWF19_N Schizosacc 90.7 0.82 1.8E-05 46.7 7.5 49 566-617 69-126 (150)
77 COG4186 Predicted phosphoester 90.6 0.81 1.8E-05 47.8 7.3 44 562-613 104-147 (186)
78 PRK09558 ushA bifunctional UDP 90.6 4 8.6E-05 49.3 14.3 50 564-615 209-258 (551)
79 COG0737 UshA 5'-nucleotidase/2 90.1 8 0.00017 46.3 16.1 119 489-614 107-247 (517)
80 COG0622 Predicted phosphoester 89.0 1.9 4.2E-05 45.0 8.8 43 563-613 78-120 (172)
81 TIGR01530 nadN NAD pyrophospha 88.0 4.4 9.6E-05 49.1 12.2 112 487-615 84-219 (550)
82 TIGR01390 CycNucDiestase 2',3' 87.2 7.2 0.00016 48.2 13.5 46 565-615 196-241 (626)
83 cd07424 MPP_PrpA_PrpB PrpA and 86.1 1 2.2E-05 47.2 4.7 43 384-439 3-45 (207)
84 cd08162 MPP_PhoA_N Synechococc 86.0 7.9 0.00017 43.8 12.0 38 565-615 208-245 (313)
85 PHA02239 putative protein phos 85.2 1 2.2E-05 49.0 4.3 45 383-439 2-46 (235)
86 smart00854 PGA_cap Bacterial c 85.1 17 0.00038 39.0 13.6 133 484-621 73-224 (239)
87 KOG3662 Cell division control 84.6 1.6 3.4E-05 51.4 5.8 83 377-497 44-144 (410)
88 cd07381 MPP_CapA CapA and rela 84.4 12 0.00026 40.0 12.0 133 483-620 76-225 (239)
89 COG3540 PhoD Phosphodiesterase 83.2 4.4 9.6E-05 48.5 8.6 47 379-439 137-185 (522)
90 TIGR00024 SbcD_rel_arch putati 81.6 1.6 3.5E-05 47.1 4.1 16 422-437 58-73 (225)
91 cd00144 MPP_PPP_family phospho 81.3 2 4.3E-05 44.6 4.6 17 422-438 24-40 (225)
92 PRK09418 bifunctional 2',3'-cy 81.0 19 0.00042 45.8 13.6 47 565-616 245-291 (780)
93 PRK09420 cpdB bifunctional 2', 80.7 18 0.00038 45.2 13.0 46 565-615 219-264 (649)
94 TIGR00282 metallophosphoestera 77.6 93 0.002 35.0 16.2 49 553-613 132-180 (266)
95 PRK00166 apaH diadenosine tetr 75.3 3.6 7.7E-05 45.9 4.5 43 384-439 3-45 (275)
96 COG1311 HYS2 Archaeal DNA poly 73.8 2.2 4.9E-05 50.9 2.7 88 378-496 222-320 (481)
97 COG1407 Predicted ICC-like pho 72.7 2.2 4.8E-05 46.9 2.1 47 422-496 63-109 (235)
98 PRK09968 serine/threonine-spec 69.3 3.3 7.1E-05 44.2 2.5 43 383-439 16-59 (218)
99 PRK09419 bifunctional 2',3'-cy 68.1 45 0.00097 44.3 12.7 48 565-616 235-282 (1163)
100 cd07422 MPP_ApaH Escherichia c 66.0 7.2 0.00016 43.2 4.3 19 421-439 25-43 (257)
101 cd07413 MPP_PA3087 Pseudomonas 62.8 7.2 0.00016 41.8 3.5 12 422-433 33-44 (222)
102 PF10230 DUF2305: Uncharacteri 59.9 18 0.00038 39.9 5.9 21 485-509 3-23 (266)
103 PRK11439 pphA serine/threonine 58.6 13 0.00028 39.6 4.6 43 383-439 18-61 (218)
104 PRK11907 bifunctional 2',3'-cy 58.4 58 0.0013 42.0 10.7 46 565-615 310-355 (814)
105 PF09587 PGA_cap: Bacterial ca 51.7 2E+02 0.0043 31.3 12.2 134 483-621 74-235 (250)
106 cd07421 MPP_Rhilphs Rhilph pho 49.2 18 0.0004 41.3 4.0 23 422-444 34-56 (304)
107 cd07423 MPP_PrpE Bacillus subt 47.8 15 0.00033 39.3 3.0 18 422-439 37-54 (234)
108 PRK13625 bis(5'-nucleosyl)-tet 47.0 15 0.00032 40.0 2.7 50 384-439 3-53 (245)
109 KOG4419 5' nucleotidase [Nucle 46.2 67 0.0015 39.9 8.2 126 479-617 120-274 (602)
110 cd07387 MPP_PolD2_C PolD2 (DNA 43.8 29 0.00062 38.8 4.4 56 383-438 1-58 (257)
111 TIGR00668 apaH bis(5'-nucleosy 36.2 26 0.00056 39.6 2.6 19 421-439 27-45 (279)
112 PF14362 DUF4407: Domain of un 35.8 45 0.00096 37.3 4.4 99 29-145 8-107 (301)
113 PF07819 PGAP1: PGAP1-like pro 26.3 2.1E+02 0.0045 31.0 7.3 80 483-574 3-93 (225)
114 KOG2310 DNA repair exonuclease 26.2 4.9E+02 0.011 32.7 10.8 52 379-443 11-74 (646)
115 cd03231 ABC_CcmA_heme_exporter 23.9 1.5E+02 0.0032 31.0 5.5 41 535-576 146-186 (201)
116 TIGR02106 cyd_oper_ybgT cyd op 21.1 58 0.0013 25.7 1.4 10 99-108 1-10 (30)
117 cd03232 ABC_PDR_domain2 The pl 21.1 1.8E+02 0.0039 30.1 5.5 41 535-576 129-169 (192)
118 TIGR02673 FtsE cell division A 20.4 1.6E+02 0.0035 30.6 4.9 41 535-576 158-198 (214)
119 KOG3724 Negative regulator of 20.3 2.1E+02 0.0046 37.1 6.6 84 481-574 86-190 (973)
No 1
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=99.91 E-value=4.6e-24 Score=226.63 Aligned_cols=222 Identities=18% Similarity=0.233 Sum_probs=146.3
Q ss_pred CCCeEEEEEeccCC-CCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCCh--hhhhhccccchhhhcC
Q 001736 379 KEDLWFDFMADTGD-GGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA--FTYERRLFRPFEYALQ 455 (1019)
Q Consensus 379 d~~~wFd~VADtGD-G~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~--e~Y~~Rfv~PYe~Al~ 455 (1019)
+.++.|.++||+|. +.++..++..+.++ . +++|+++++||++|..+.. ++++ .|++.++...
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~-~------------~~~d~vl~~GDl~~~~~~~~~~~~~-~~~~~~~~~~- 66 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKE-L------------GNYDAILHVGDLAYADGYNNGSRWD-TFMRQIEPLA- 66 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhc-c------------CCccEEEEcCchhhhcCCccchhHH-HHHHHHHHHH-
Confidence 57899999999997 45666666666554 1 3569999999999988764 3333 2333332110
Q ss_pred CCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHHH-HHhhcccc-CCccccCCCcceEEEECCCcE
Q 001736 456 PPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFM-RFICHKSW-LGGWFMPQKKSYFALQLPKGW 533 (1019)
Q Consensus 456 ~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~-R~F~~r~~-lgGW~mpQ~~SYFAlrLp~~w 533 (1019)
. ..| ++++|||||......... +.+..+.. ...-.......||+++.++ +
T Consensus 67 -------------------------~-~~P-~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~-v 118 (294)
T cd00839 67 -------------------------S-YVP-YMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGP-V 118 (294)
T ss_pred -------------------------h-cCC-cEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCC-E
Confidence 0 234 999999999876533211 11000000 0000111334699999996 8
Q ss_pred EEEEEecCCCC---CCCHHHHHHHHHHHHhhcC-CCCeEEEEecCCCccccccccCc-chhhhHHHHHhhh-CCceeEEE
Q 001736 534 WVFGLDLALHC---DIDVYQFKFFAELVKEQVG-ERDSVIIMTHEPNWLLDWYFNNV-SGKNVKHLICDYL-KGRCKLRI 607 (1019)
Q Consensus 534 WLlGLDsql~g---dID~~Q~~wFe~ll~~~v~-~~d~VIL~tHeP~w~~d~~~~~~-~~~~l~~Lle~~L-~~RV~LvL 607 (1019)
.+++||++... .+...|++|+++.|++.-+ ..+++|+++|+|.|......... .....+..+++++ +++|+++|
T Consensus 119 ~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl 198 (294)
T cd00839 119 HFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVL 198 (294)
T ss_pred EEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEE
Confidence 99999998654 6778999999999874222 23689999999999876543221 1122333445555 67999999
Q ss_pred cCccCCCcceeecCCC---------CCcccceEEEecCCCCcCCc
Q 001736 608 AGDMHHYMRHSYVPSD---------GPVYVQHLLVNGCGGAFLHP 643 (1019)
Q Consensus 608 AGHiHhYsR~~~~~~~---------G~~~~~~lIVsGGGGAfLhP 643 (1019)
+||+|.|+|..|..+. ....++.+||+|+||+-+.+
T Consensus 199 ~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~~~~~ 243 (294)
T cd00839 199 SGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGNDEGL 243 (294)
T ss_pred EccceeeEeechhhCCEeccccccccCCCccEEEEECCCccccCc
Confidence 9999999999875321 11236689999999997764
No 2
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.91 E-value=3.4e-24 Score=226.14 Aligned_cols=216 Identities=19% Similarity=0.224 Sum_probs=149.6
Q ss_pred eEEEEEeccCCC-CCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCChhhhhhccccchhhhcCCCCCC
Q 001736 382 LWFDFMADTGDG-GNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWY 460 (1019)
Q Consensus 382 ~wFd~VADtGDG-~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~ 460 (1019)
+.|.++||+|.+ .+.+.++++.|++... ..++||+|++||++|+.+...++..++.+.|+..+..
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~----------~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~---- 66 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAA----------ELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA---- 66 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHH----------hcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc----
Confidence 469999999987 6788889998887542 1356999999999999987655555555555544321
Q ss_pred cccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEECCC-----cEEE
Q 001736 461 KKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPK-----GWWV 535 (1019)
Q Consensus 461 ~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLp~-----~wWL 535 (1019)
++ ...| +++||||||+.++..+...+.-.. ....|.+| ..||+++.+. +++|
T Consensus 67 ------------------~~-~~~P-~~~v~GNHD~~~~~~~~~~~~~~~-~~~~~~~~--~~~y~~~~~~~~~~~~~~~ 123 (277)
T cd07378 67 ------------------PS-LQVP-WYLVLGNHDYSGNVSAQIDYTKRP-NSPRWTMP--AYYYRVSFPFPSSDTTVEF 123 (277)
T ss_pred ------------------hh-hcCC-eEEecCCcccCCCchheeehhccC-CCCCccCc--chheEEEeecCCCCCEEEE
Confidence 11 2345 999999999987754433222110 12334454 4588999874 6999
Q ss_pred EEEecCCC---------------CCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhh-
Q 001736 536 FGLDLALH---------------CDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL- 599 (1019)
Q Consensus 536 lGLDsql~---------------gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L- 599 (1019)
++|||+.. +.+...|++||++.+++ . +++++||++|||.+..+..... ...+..+++++
T Consensus 124 i~LDt~~~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~-~-~~~~~iv~~H~P~~~~~~~~~~---~~~~~~l~~l~~ 198 (277)
T cd07378 124 IMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAA-S-TADWKIVVGHHPIYSSGEHGPT---SCLVDRLLPLLK 198 (277)
T ss_pred EEEeChhHcCccccccccccCcchhhHHHHHHHHHHHHHh-c-CCCeEEEEeCccceeCCCCCCc---HHHHHHHHHHHH
Confidence 99999853 23467999999999974 3 3489999999999976543211 11222334444
Q ss_pred CCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCCcCCcc
Q 001736 600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLHPT 644 (1019)
Q Consensus 600 ~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGAfLhPT 644 (1019)
+++|+++|+||+|.|++..... .+.++||+|+||+.....
T Consensus 199 ~~~v~~vl~GH~H~~~~~~~~~-----~~~~~i~~G~~~~~~~~~ 238 (277)
T cd07378 199 KYKVDAYLSGHDHNLQHIKDDG-----SGTSFVVSGAGSKARPSV 238 (277)
T ss_pred HcCCCEEEeCCcccceeeecCC-----CCcEEEEeCCCcccCCCC
Confidence 5689999999999999987653 234789999888755443
No 3
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=99.91 E-value=1.3e-23 Score=235.80 Aligned_cols=221 Identities=16% Similarity=0.160 Sum_probs=159.9
Q ss_pred CCCCCeEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCChhhhhhccccchhhhcCC
Q 001736 377 SEKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQP 456 (1019)
Q Consensus 377 ~~d~~~wFd~VADtGDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~ 456 (1019)
..++.+.|..+||.|.|...|++||+.|++-..+ -+.||++..||+. ++|-....+.||.+-||..+.+
T Consensus 22 ~~~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~----------~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~ 90 (394)
T PTZ00422 22 SVKAQLRFASLGNWGTGSKQQKLVASYLKQYAKN----------ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSE 90 (394)
T ss_pred ccCCeEEEEEEecCCCCchhHHHHHHHHHHHHHh----------CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccC
Confidence 4578899999999999999999999999976532 2569999999997 6776656666776667665432
Q ss_pred CCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHHHHHhhcc----------------ccCCccccCC
Q 001736 457 PPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHK----------------SWLGGWFMPQ 520 (1019)
Q Consensus 457 ~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r----------------~~lgGW~mpQ 520 (1019)
+ . ..+..| +|+++|||||..+.++++...-+. .....|.||.
T Consensus 91 ~-------------s--------~~L~~P-wy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~ 148 (394)
T PTZ00422 91 E-------------S--------GDMQIP-FFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN 148 (394)
T ss_pred c-------------c--------hhhCCC-eEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc
Confidence 1 1 012345 999999999998888887422110 1135799996
Q ss_pred CcceEEEE----CC------------CcEEEEEEecCCCC------CCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCcc
Q 001736 521 KKSYFALQ----LP------------KGWWVFGLDLALHC------DIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWL 578 (1019)
Q Consensus 521 ~~SYFAlr----Lp------------~~wWLlGLDsql~g------dID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~ 578 (1019)
+ ||.+. .+ ...-++.+||..-. +....|.+|+++.++.+....+|+||+.|||.|+
T Consensus 149 ~--yY~~~~~f~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~k~a~WkIVvGHhPIyS 226 (394)
T PTZ00422 149 Y--WYHYFTHFTDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAPKIADYIIVVGDKPIYS 226 (394)
T ss_pred h--hheeeeeeecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhhccCCCeEEEEecCceee
Confidence 5 77642 11 12678999997422 2346789999998864344568999999999999
Q ss_pred ccccccCcchhhhHHHHHhhh-CCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCCcCC
Q 001736 579 LDWYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLH 642 (1019)
Q Consensus 579 ~d~~~~~~~~~~l~~Lle~~L-~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGAfLh 642 (1019)
.+.++++. .+...++++| +++|+++||||.|+|||.+.. | .++|||||||+...
T Consensus 227 sG~hg~~~---~L~~~L~PLL~ky~VdlYisGHDH~lq~i~~~---g----t~yIvSGaGs~~~~ 281 (394)
T PTZ00422 227 SGSSKGDS---YLSYYLLPLLKDAQVDLYISGYDRNMEVLTDE---G----TAHINCGSGGNSGR 281 (394)
T ss_pred cCCCCCCH---HHHHHHHHHHHHcCcCEEEEccccceEEecCC---C----ceEEEeCccccccC
Confidence 98764322 2444556666 679999999999999997532 2 37999999997543
No 4
>PLN02533 probable purple acid phosphatase
Probab=99.90 E-value=6.1e-23 Score=233.19 Aligned_cols=210 Identities=20% Similarity=0.299 Sum_probs=144.3
Q ss_pred CCCCCeEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCChhhhh--hccccchhhhc
Q 001736 377 SEKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYE--RRLFRPFEYAL 454 (1019)
Q Consensus 377 ~~d~~~wFd~VADtGDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~--~Rfv~PYe~Al 454 (1019)
+.+.++.|.++||+|.+.....+++.+.+ .++|+++++||++|.+.....++ .++++|+.
T Consensus 135 p~~~~~~f~v~GDlG~~~~~~~tl~~i~~---------------~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~--- 196 (427)
T PLN02533 135 PSKFPIKFAVSGDLGTSEWTKSTLEHVSK---------------WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLA--- 196 (427)
T ss_pred CCCCCeEEEEEEeCCCCcccHHHHHHHHh---------------cCCCEEEEcCccccccchHHHHHHHHHHhhhHh---
Confidence 34568999999999977655555555421 24599999999999754322111 12223321
Q ss_pred CCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCCh----hHHHHHhhccccCCccccCCC------cce
Q 001736 455 QPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL----NTFMRFICHKSWLGGWFMPQK------KSY 524 (1019)
Q Consensus 455 ~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL----~aF~R~F~~r~~lgGW~mpQ~------~SY 524 (1019)
. ..| ++++|||||..... ..|.. +...|.||.. ..|
T Consensus 197 --------------------------s-~~P-~m~~~GNHE~~~~~~~~~~~f~~------y~~rf~mP~~~~g~~~~~y 242 (427)
T PLN02533 197 --------------------------S-QRP-WMVTHGNHELEKIPILHPEKFTA------YNARWRMPFEESGSTSNLY 242 (427)
T ss_pred --------------------------h-cCc-eEEeCccccccccccccCcCccc------hhhcccCCccccCCCCCce
Confidence 1 235 99999999985321 11111 1234677743 259
Q ss_pred EEEECCCcEEEEEEecCCCCCCCHHHHHHHHHHHHhhcC--CCCeEEEEecCCCccccccccCcc-hhhhHHHHHhhh-C
Q 001736 525 FALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQVG--ERDSVIIMTHEPNWLLDWYFNNVS-GKNVKHLICDYL-K 600 (1019)
Q Consensus 525 FAlrLp~~wWLlGLDsql~gdID~~Q~~wFe~ll~~~v~--~~d~VIL~tHeP~w~~d~~~~~~~-~~~l~~Lle~~L-~ 600 (1019)
|+++.+. +++++||+......+.+|++||++.|++ .+ ..+|+|++.|+|.|..+..+.++. ...++..+++++ +
T Consensus 243 YSfd~g~-vhfI~Lds~~~~~~~~~Q~~WLe~dL~~-~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~ 320 (427)
T PLN02533 243 YSFNVYG-VHIIMLGSYTDFEPGSEQYQWLENNLKK-IDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYK 320 (427)
T ss_pred EEEEECC-EEEEEEeCCccccCchHHHHHHHHHHHh-hcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHH
Confidence 9999986 8999999988777789999999999974 33 347899999999998764432221 122344456666 7
Q ss_pred CceeEEEcCccCCCcceeecCCCC-CcccceEEEecCCCCc
Q 001736 601 GRCKLRIAGDMHHYMRHSYVPSDG-PVYVQHLLVNGCGGAF 640 (1019)
Q Consensus 601 ~RV~LvLAGHiHhYsR~~~~~~~G-~~~~~~lIVsGGGGAf 640 (1019)
++|+|+|+||+|.|+|..|..... ..+++.+||+|+||.-
T Consensus 321 ~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~ 361 (427)
T PLN02533 321 ARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNR 361 (427)
T ss_pred hCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccc
Confidence 799999999999999998875321 1246789999999974
No 5
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=99.84 E-value=3e-20 Score=210.24 Aligned_cols=216 Identities=17% Similarity=0.229 Sum_probs=157.1
Q ss_pred CCCCeEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCChh-hhh--hccccchhhhc
Q 001736 378 EKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAF-TYE--RRLFRPFEYAL 454 (1019)
Q Consensus 378 ~d~~~wFd~VADtGDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e-~Y~--~Rfv~PYe~Al 454 (1019)
++.+..|++.||+|....++-+...+++.+ .+|++++.||++|..+..+ ..+ .|+++|..+
T Consensus 144 ~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~--------------k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As-- 207 (452)
T KOG1378|consen 144 QDSPTRAAIFGDMGCTEPYTSTLRNQEENL--------------KPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIAS-- 207 (452)
T ss_pred ccCceeEEEEccccccccccchHhHHhccc--------------CCcEEEEecchhhcCCCCccchHHHHhhhhhhhc--
Confidence 458899999999999988877777766553 4599999999999986552 222 567777753
Q ss_pred CCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcc------eEEEE
Q 001736 455 QPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKS------YFALQ 528 (1019)
Q Consensus 455 ~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~S------YFAlr 528 (1019)
..| .+++.||||.---.+. |-......|.||-+.| ||+++
T Consensus 208 ----------------------------~vP-ymv~~GNHE~d~~~~~-----~F~~y~~Rf~mP~~~s~s~~~l~YSfd 253 (452)
T KOG1378|consen 208 ----------------------------YVP-YMVCSGNHEIDWPPQP-----CFVPYSARFNMPGNSSESDSNLYYSFD 253 (452)
T ss_pred ----------------------------cCc-eEEecccccccCCCcc-----cccccceeeccCCCcCCCCCceeEEEe
Confidence 235 9999999986211111 2222344578886543 99999
Q ss_pred CCCcEEEEEEecCCCCC--CCHHHHHHHHHHHHhhcCC--CCeEEEEecCCCcccccc-ccCcch-hhhHHHHHhhh-CC
Q 001736 529 LPKGWWVFGLDLALHCD--IDVYQFKFFAELVKEQVGE--RDSVIIMTHEPNWLLDWY-FNNVSG-KNVKHLICDYL-KG 601 (1019)
Q Consensus 529 Lp~~wWLlGLDsql~gd--ID~~Q~~wFe~ll~~~v~~--~d~VIL~tHeP~w~~d~~-~~~~~~-~~l~~Lle~~L-~~ 601 (1019)
++. .++++|++..... ...+|++||++.|+ +++. .+|+|++.|.|.|.++.. +..+.. ...+.-+|++| ++
T Consensus 254 ~G~-vhfv~lsse~~~~~~~~~~QY~WL~~dL~-~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~ 331 (452)
T KOG1378|consen 254 VGG-VHFVVLSTETYYNFLKGTAQYQWLERDLA-SVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKY 331 (452)
T ss_pred ecc-EEEEEEeccccccccccchHHHHHHHHHH-HhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHh
Confidence 997 7999999987643 34699999999996 4665 699999999999999862 111111 12334456666 88
Q ss_pred ceeEEEcCccCCCcceeecCC------CC-----CcccceEEEecCCCC--cCCccc
Q 001736 602 RCKLRIAGDMHHYMRHSYVPS------DG-----PVYVQHLLVNGCGGA--FLHPTH 645 (1019)
Q Consensus 602 RV~LvLAGHiHhYsR~~~~~~------~G-----~~~~~~lIVsGGGGA--fLhPTH 645 (1019)
+|+++|+||.|.|+|..|... .| ...+|.+||+|+||+ -+.+-.
T Consensus 332 ~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~ 388 (452)
T KOG1378|consen 332 KVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFS 388 (452)
T ss_pred ceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCccc
Confidence 999999999999999988752 12 245789999999995 444443
No 6
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=7.5e-18 Score=180.06 Aligned_cols=225 Identities=19% Similarity=0.202 Sum_probs=154.6
Q ss_pred cCCCCCeEEEEEeccC-CCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCChhhhhhccccchhhhc
Q 001736 376 LSEKEDLWFDFMADTG-DGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYAL 454 (1019)
Q Consensus 376 ~~~d~~~wFd~VADtG-DG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al 454 (1019)
..+++.+.|-+|||.| .|.-.|.+||..|+.-..+ ...|||+-+||+.|-+|-...+..||.+.|+..+
T Consensus 38 ~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~----------l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIY 107 (336)
T KOG2679|consen 38 AKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEK----------LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIY 107 (336)
T ss_pred CCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHh----------ccceEEEecCCcccccCCCCCCChhHHhhhhhcc
Confidence 3467899999999999 6777788899888754422 3459999999999999999999999999999876
Q ss_pred CCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEECCCcEE
Q 001736 455 QPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWW 534 (1019)
Q Consensus 455 ~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLp~~wW 534 (1019)
.. |. | +.| +|.|.||||+..+.++++.-...+. -..|.- ++|||..- .. .=
T Consensus 108 T~-------------pS-------L---Qkp-Wy~vlGNHDyrGnV~AQls~~l~~~-d~RW~c--~rsf~~~a-e~-ve 158 (336)
T KOG2679|consen 108 TA-------------PS-------L---QKP-WYSVLGNHDYRGNVEAQLSPVLRKI-DKRWIC--PRSFYVDA-EI-VE 158 (336)
T ss_pred cC-------------cc-------c---ccc-hhhhccCccccCchhhhhhHHHHhh-ccceec--ccHHhhcc-ee-ee
Confidence 53 22 2 335 9999999999999999887332211 112332 24453222 00 11
Q ss_pred EEEEecCCC---------CC------------CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHH
Q 001736 535 VFGLDLALH---------CD------------IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKH 593 (1019)
Q Consensus 535 LlGLDsql~---------gd------------ID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~ 593 (1019)
+++.|+..- .+ +-+.|+.||+..+++ ...+|+||+.|||.|+.+.+.. + +.+++
T Consensus 159 ~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~--S~a~wkiVvGHh~i~S~~~HG~--T-~eL~~ 233 (336)
T KOG2679|consen 159 MFFVDTTPFMDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKA--SRAKWKIVVGHHPIKSAGHHGP--T-KELEK 233 (336)
T ss_pred eeccccccchhhheecccccccccccCChHHHHHHHHHHHHHHHHHH--hhcceEEEecccceehhhccCC--h-HHHHH
Confidence 233333211 11 113678888888864 4569999999999999886643 1 12333
Q ss_pred HHHhhh-CCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCCcCCccccCCc
Q 001736 594 LICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLHPTHVFSN 649 (1019)
Q Consensus 594 Lle~~L-~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGAfLhPTH~~~~ 649 (1019)
.+.++| ..+|+++++||.|.-|...-.. ++.+++|||||---=..|+..++
T Consensus 234 ~LlPiL~~n~VdlY~nGHDHcLQhis~~e-----~~iqf~tSGagSkaw~g~~~~~~ 285 (336)
T KOG2679|consen 234 QLLPILEANGVDLYINGHDHCLQHISSPE-----SGIQFVTSGAGSKAWRGTDHNPE 285 (336)
T ss_pred HHHHHHHhcCCcEEEecchhhhhhccCCC-----CCeeEEeeCCcccccCCCccCCc
Confidence 334444 5699999999999888876332 45689999997766666676664
No 7
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.71 E-value=2.3e-16 Score=166.39 Aligned_cols=179 Identities=20% Similarity=0.245 Sum_probs=109.7
Q ss_pred cCCccEEEEcccccCcCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCC
Q 001736 420 LPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDG 499 (1019)
Q Consensus 420 lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDG 499 (1019)
.|++|+|+++||++..+... ++..+..+.+...++. + . .+.+++.||||||..+.
T Consensus 47 ~~~pd~ii~~GDl~~~~~~~-~~~~~~~~~~~~~~~~----------------------~-~-~~vp~~~i~GNHD~~~~ 101 (262)
T cd07395 47 NPKPKFVVVCGDLVNAMPGD-ELRERQVSDLKDVLSL----------------------L-D-PDIPLVCVCGNHDVGNT 101 (262)
T ss_pred CCCCCEEEEeCCcCCCCcch-hhHHHHHHHHHHHHhh----------------------c-c-CCCcEEEeCCCCCCCCC
Confidence 35679999999999876543 2322222334333321 1 0 12349999999998533
Q ss_pred h-hHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCCCC------CCCHHHHHHHHHHHHhhc-CCCCeEEEE
Q 001736 500 L-NTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHC------DIDVYQFKFFAELVKEQV-GERDSVIIM 571 (1019)
Q Consensus 500 L-~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLp~~wWLlGLDsql~g------dID~~Q~~wFe~ll~~~v-~~~d~VIL~ 571 (1019)
. ....+.|.+ . ....||++..++ +++++||++... .++..|++||++++++.- ..+.++||+
T Consensus 102 ~~~~~~~~f~~-~--------~g~~~y~~~~~~-~~~i~lds~~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~ 171 (262)
T cd07395 102 PTEESIKDYRD-V--------FGDDYFSFWVGG-VFFIVLNSQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVF 171 (262)
T ss_pred CChhHHHHHHH-H--------hCCcceEEEECC-EEEEEeccccccCccccccchHHHHHHHHHHHHHHHhccCCcEEEE
Confidence 1 111111211 0 112478888865 899999997532 456799999999997422 245799999
Q ss_pred ecCCCccccccccCc---chhhhHHHHHhhh-CCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCCc
Q 001736 572 THEPNWLLDWYFNNV---SGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAF 640 (1019)
Q Consensus 572 tHeP~w~~d~~~~~~---~~~~l~~Lle~~L-~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGAf 640 (1019)
+|+|.+..+....+. .....+..+.+++ +++|+++|+||+|.+.+... . | .+++++|+.|..
T Consensus 172 ~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~~-~--g----~~~~~~~~~~~~ 237 (262)
T cd07395 172 QHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGRY-G--G----LEMVVTSAIGAQ 237 (262)
T ss_pred ECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceEE-C--C----EEEEEcCceecc
Confidence 999998654322111 0111122234444 57999999999998876542 1 2 367888887763
No 8
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.68 E-value=9.3e-16 Score=163.57 Aligned_cols=136 Identities=18% Similarity=0.132 Sum_probs=88.4
Q ss_pred cEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCC-----------------------
Q 001736 486 QCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLAL----------------------- 542 (1019)
Q Consensus 486 ~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLp~~wWLlGLDsql----------------------- 542 (1019)
+++.+|||||+++....... . . ........||++... +|.+++||+..
T Consensus 75 p~~~v~GNHD~~~~~~~~~~---~-~----~~~~~~~~yysf~~~-~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (267)
T cd07396 75 PVHHVLGNHDLYNPSREYLL---L-Y----TLLGLGAPYYSFSPG-GIRFIVLDGYDISALGRPEDTPKAENADDNSNLG 145 (267)
T ss_pred CEEEecCccccccccHhhhh---c-c----cccCCCCceEEEecC-CcEEEEEeCCccccccCCCCChhhhhHHHhchhh
Confidence 49999999999766432211 0 0 111133458999876 69999999953
Q ss_pred -----------CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhh-C-CceeEEEcC
Q 001736 543 -----------HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-K-GRCKLRIAG 609 (1019)
Q Consensus 543 -----------~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L-~-~RV~LvLAG 609 (1019)
.+.++..|++|+++.+++...++.++||++|+|.+..... ......+.+.+ .+++ + .+|+++|+|
T Consensus 146 ~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~~~viV~~Hhp~~~~~~~-~~~~~~~~~~~-~~ll~~~~~V~~v~~G 223 (267)
T cd07396 146 LYLSEPRFVDWNGGIGEEQLQWLRNELQEADANGEKVIIFSHFPLHPESTS-PHGLLWNHEEV-LSILRAYGCVKACISG 223 (267)
T ss_pred hhccCccceeccCcCCHHHHHHHHHHHHHHHhcCCeEEEEEeccCCCCCCC-ccccccCHHHH-HHHHHhCCCEEEEEcC
Confidence 3467889999999999754345678999999999865431 11111122222 3333 3 489999999
Q ss_pred ccCCCcceeecCCCCCcccceEEEecCCCC
Q 001736 610 DMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (1019)
Q Consensus 610 HiHhYsR~~~~~~~G~~~~~~lIVsGGGGA 639 (1019)
|+|.++.... . +.+++++|+=+-
T Consensus 224 H~H~~~~~~~---~----gi~~~~~~a~~~ 246 (267)
T cd07396 224 HDHEGGYAQR---H----GIHFLTLEGMVE 246 (267)
T ss_pred CcCCCCcccc---C----CeeEEEechhhc
Confidence 9998874431 1 336788777443
No 9
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.68 E-value=7.3e-16 Score=159.11 Aligned_cols=169 Identities=21% Similarity=0.329 Sum_probs=108.1
Q ss_pred CCccEEEEcccccCcCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCCh
Q 001736 421 PRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL 500 (1019)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL 500 (1019)
+++|++|++||++.. ++.++|+. +.+- + ++++.| ++.||||||..+.
T Consensus 39 ~~~d~vi~~GDl~~~-~~~~~~~~-~~~~----l-------------------------~~~~~p-~~~v~GNHD~~~~- 85 (240)
T cd07402 39 PRPDLVLVTGDLTDD-GSPESYER-LREL----L-------------------------AALPIP-VYLLPGNHDDRAA- 85 (240)
T ss_pred CCCCEEEECccCCCC-CCHHHHHH-HHHH----H-------------------------hhcCCC-EEEeCCCCCCHHH-
Confidence 567999999999975 44444432 2111 1 122335 9999999998533
Q ss_pred hHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCCC----CCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001736 501 NTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALH----CDIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (1019)
Q Consensus 501 ~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLp~~wWLlGLDsql~----gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~ 576 (1019)
+.+++..... .....+|+++.+. +.+++||+... +.++..|++|+++.+++ . +++++|+++|+|+
T Consensus 86 --~~~~~~~~~~------~~~~~~~~~~~~~-~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~~-~-~~~~~il~~H~pp 154 (240)
T cd07402 86 --MRAVFPELPP------APGFVQYVVDLGG-WRLILLDSSVPGQHGGELCAAQLDWLEAALAE-A-PDKPTLVFLHHPP 154 (240)
T ss_pred --HHHhhccccc------cccccceeEecCC-EEEEEEeCCCCCCcCCEECHHHHHHHHHHHHh-C-CCCCEEEEECCCC
Confidence 4444432111 1223467888874 89999998753 44678999999999974 2 3689999999999
Q ss_pred ccccccc-cCcchhhhHHHHHhhh-CC-ceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCCcC
Q 001736 577 WLLDWYF-NNVSGKNVKHLICDYL-KG-RCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFL 641 (1019)
Q Consensus 577 w~~d~~~-~~~~~~~l~~Lle~~L-~~-RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGAfL 641 (1019)
+...... +.....+. ..+.+.+ ++ +++++|+||+|.++..... +.+++++|+.|.-.
T Consensus 155 ~~~~~~~~~~~~~~~~-~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~-------g~~~~~~gs~~~~~ 214 (240)
T cd07402 155 FPVGIAWMDAIGLRNA-EALAAVLARHPNVRAILCGHVHRPIDGSWG-------GIPLLTAPSTCHQF 214 (240)
T ss_pred ccCCchhhhhhhCCCH-HHHHHHHhcCCCeeEEEECCcCchHHeEEC-------CEEEEEcCcceeee
Confidence 7653211 11111122 2233344 55 8999999999987666531 23778888866533
No 10
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.59 E-value=2.3e-14 Score=153.42 Aligned_cols=199 Identities=20% Similarity=0.297 Sum_probs=114.0
Q ss_pred CCCCeEEEEEeccC---CC------CCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCChhhhhhcccc
Q 001736 378 EKEDLWFDFMADTG---DG------GNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFR 448 (1019)
Q Consensus 378 ~d~~~wFd~VADtG---DG------~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~ 448 (1019)
+++++.|..++|+= +. .+...+..+++++-+ ...+.+|+||++||++- .++.++|+. +.+
T Consensus 11 ~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~---------~~~~~~D~vvitGDl~~-~~~~~~~~~-~~~ 79 (275)
T PRK11148 11 GEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIR---------AQQHEFDLIVATGDLAQ-DHSSEAYQH-FAE 79 (275)
T ss_pred CCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHH---------hhCCCCCEEEECCCCCC-CCCHHHHHH-HHH
Confidence 34779999999993 22 122233444443321 01246799999999987 355555543 222
Q ss_pred chhhhcCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEE
Q 001736 449 PFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQ 528 (1019)
Q Consensus 449 PYe~Al~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlr 528 (1019)
.+ ++++.| ++.||||||.... +.+++... ++. ..|+.+.
T Consensus 80 ~l-----------------------------~~l~~P-v~~v~GNHD~~~~---~~~~~~~~----~~~----~~~~~~~ 118 (275)
T PRK11148 80 GI-----------------------------APLRKP-CVWLPGNHDFQPA---MYSALQDA----GIS----PAKHVLI 118 (275)
T ss_pred HH-----------------------------hhcCCc-EEEeCCCCCChHH---HHHHHhhc----CCC----ccceEEe
Confidence 22 122345 9999999998644 33333221 121 1233333
Q ss_pred CCCcEEEEEEecCC----CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccc-cCcchhhhHHHHHhhh-CC-
Q 001736 529 LPKGWWVFGLDLAL----HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYF-NNVSGKNVKHLICDYL-KG- 601 (1019)
Q Consensus 529 Lp~~wWLlGLDsql----~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~-~~~~~~~l~~Lle~~L-~~- 601 (1019)
..+|++++||+.. .+.++..|++|+++.+++ . +++++||++|||+...+..+ +...-.+...+ .+++ ++
T Consensus 119 -~~~~~~i~Lds~~~g~~~G~l~~~ql~wL~~~L~~-~-~~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l-~~ll~~~~ 194 (275)
T PRK11148 119 -GEHWQILLLDSQVFGVPHGELSEYQLEWLERKLAD-A-PERHTLVLLHHHPLPAGCAWLDQHSLRNAHEL-AEVLAKFP 194 (275)
T ss_pred -cCCEEEEEecCCCCCCcCCEeCHHHHHHHHHHHhh-C-CCCCeEEEEcCCCCCCCcchhhccCCCCHHHH-HHHHhcCC
Confidence 4459999999975 456789999999999974 3 34555666665443332211 11111222222 3333 54
Q ss_pred ceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCC
Q 001736 602 RCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (1019)
Q Consensus 602 RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGA 639 (1019)
+|+++|+||+|....... . +..++++++.+.
T Consensus 195 ~v~~vl~GH~H~~~~~~~-~------gi~~~~~ps~~~ 225 (275)
T PRK11148 195 NVKAILCGHIHQELDLDW-N------GRRLLATPSTCV 225 (275)
T ss_pred CceEEEecccChHHhceE-C------CEEEEEcCCCcC
Confidence 899999999998644321 1 225677666554
No 11
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.56 E-value=3e-14 Score=151.92 Aligned_cols=128 Identities=16% Similarity=0.140 Sum_probs=80.0
Q ss_pred CcEEEeCCCCCCCCCh--hHHHHHhhccccCCccccCCCcceEEEEC-CCcEEEEEEecCCC----------CCCCHHHH
Q 001736 485 PQCYIIPGNHDWFDGL--NTFMRFICHKSWLGGWFMPQKKSYFALQL-PKGWWVFGLDLALH----------CDIDVYQF 551 (1019)
Q Consensus 485 P~vfAIPGNHDWyDGL--~aF~R~F~~r~~lgGW~mpQ~~SYFAlrL-p~~wWLlGLDsql~----------gdID~~Q~ 551 (1019)
.+++.||||||.|+-. +.+.+++.+ + .++.++... ||.... -.++.++|||++.. +.+++.|+
T Consensus 77 ~p~~~v~GNHD~~~~~~~~~~~~~~~~--y-~~~~~~~~~-~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql 152 (256)
T cd07401 77 EKWFDIRGNHDLFNIPSLDSENNYYRK--Y-SATGRDGSF-SFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLL 152 (256)
T ss_pred ceEEEeCCCCCcCCCCCccchhhHHHH--h-heecCCCcc-ceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHH
Confidence 3499999999997321 122222211 1 112222222 333322 23599999999742 56789999
Q ss_pred HHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcceeecC
Q 001736 552 KFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVP 621 (1019)
Q Consensus 552 ~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~~~~ 621 (1019)
+|+++.+++ .++++++||++|+|.+....... .....+..+++ +++|+++|+||+|.+++-.|..
T Consensus 153 ~wL~~~L~~-~~~~~~~IV~~HhP~~~~~~~~~-~~~~~~~~ll~---~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 153 DRLEKELEK-STNSNYTIWFGHYPTSTIISPSA-KSSSKFKDLLK---KYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHHHh-cccCCeEEEEEcccchhccCCCc-chhHHHHHHHH---hcCCcEEEeCCccCCCcceeee
Confidence 999998863 45567999999999965432111 11111333333 5689999999999999966664
No 12
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.50 E-value=2e-13 Score=141.87 Aligned_cols=127 Identities=18% Similarity=0.229 Sum_probs=83.4
Q ss_pred CCccEEEEcccccCcCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCCh
Q 001736 421 PRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL 500 (1019)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL 500 (1019)
.++|+++++||++..+...++|..-. +-++ ++++ .+.+++.+|||||
T Consensus 34 ~~~d~iv~~GDl~~~~~~~~~~~~~~-~~~~--------------------------~l~~-~~~p~~~~~GNHD----- 80 (214)
T cd07399 34 LNIAFVLHLGDIVDDGDNDAEWEAAD-KAFA--------------------------RLDK-AGIPYSVLAGNHD----- 80 (214)
T ss_pred cCCCEEEECCCccCCCCCHHHHHHHH-HHHH--------------------------HHHH-cCCcEEEECCCCc-----
Confidence 35699999999998665444453211 1111 1111 1234999999999
Q ss_pred hHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCcccc
Q 001736 501 NTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLD 580 (1019)
Q Consensus 501 ~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLp~~wWLlGLDsql~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d 580 (1019)
.++++|+ .++..|++||++++++ .++.++|+++|||.+..+
T Consensus 81 ---------------------------------~~~~ld~----~~~~~ql~WL~~~L~~--~~~~~~iv~~H~p~~~~~ 121 (214)
T cd07399 81 ---------------------------------LVLALEF----GPRDEVLQWANEVLKK--HPDRPAILTTHAYLNCDD 121 (214)
T ss_pred ---------------------------------chhhCCC----CCCHHHHHHHHHHHHH--CCCCCEEEEecccccCCC
Confidence 1344443 3568999999999974 446899999999999665
Q ss_pred ccccCc----chhhhHHHHHhhh-CC-ceeEEEcCccCCCcceee
Q 001736 581 WYFNNV----SGKNVKHLICDYL-KG-RCKLRIAGDMHHYMRHSY 619 (1019)
Q Consensus 581 ~~~~~~----~~~~l~~Lle~~L-~~-RV~LvLAGHiHhYsR~~~ 619 (1019)
...+.. ...+.+..+++++ ++ +|+++|+||+|.+.+-..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 122 SRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred CcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 332211 0122333455666 45 799999999999877765
No 13
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.48 E-value=2e-13 Score=146.93 Aligned_cols=167 Identities=19% Similarity=0.165 Sum_probs=102.6
Q ss_pred CCccEEEEcccccCcCCChhhhh-------hccccchhhhcCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCC
Q 001736 421 PRGDVLLIGGDLAYPNPSAFTYE-------RRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGN 493 (1019)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~e~Y~-------~Rfv~PYe~Al~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGN 493 (1019)
+++||+|++||++......+..+ ..+++.++..+ +..++++++||
T Consensus 67 ~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~----------------------------~~~pv~~~~GN 118 (296)
T cd00842 67 PKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAF----------------------------PDTPVYPALGN 118 (296)
T ss_pred CCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhC----------------------------CCCCEEEcCCC
Confidence 57799999999999875432221 22222232211 23349999999
Q ss_pred CCCCCC--------hhHHH----HHhhccccCCccccCCCcceEEEECCCcEEEEEEecCCC-----------CCCCHHH
Q 001736 494 HDWFDG--------LNTFM----RFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALH-----------CDIDVYQ 550 (1019)
Q Consensus 494 HDWyDG--------L~aF~----R~F~~r~~lgGW~mpQ~~SYFAlrLp~~wWLlGLDsql~-----------gdID~~Q 550 (1019)
||.+.. .+.+. ..+..--+..+..+-.+..||+..+..++++++||++.. ......|
T Consensus 119 HD~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Q 198 (296)
T cd00842 119 HDSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQ 198 (296)
T ss_pred CCCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHH
Confidence 998743 11111 111110000011122345799999777799999999742 1233689
Q ss_pred HHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcc
Q 001736 551 FKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (1019)
Q Consensus 551 ~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR 616 (1019)
++||+++|++..+.+.+|||++|+|.............+....+++++ +..|...|+||+|..+-
T Consensus 199 l~WL~~~L~~a~~~~~~v~I~~HiPp~~~~~~~~~~~~~~~~~ii~~y-~~~i~~~~~GH~H~d~~ 263 (296)
T cd00842 199 LQWLEDELQEAEQAGEKVWIIGHIPPGVNSYDTLENWSERYLQIINRY-SDTIAGQFFGHTHRDEF 263 (296)
T ss_pred HHHHHHHHHHHHHCCCeEEEEeccCCCCcccccchHHHHHHHHHHHHH-HHhhheeeecccccceE
Confidence 999999998644567899999999998654321101123444566655 34488999999996543
No 14
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.46 E-value=6.8e-14 Score=127.44 Aligned_cols=193 Identities=16% Similarity=0.184 Sum_probs=95.0
Q ss_pred eEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCChhhhhhccccchhhhcCCCCCCc
Q 001736 382 LWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYK 461 (1019)
Q Consensus 382 ~wFd~VADtGDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~ 461 (1019)
+.|.+++|+.-+..........+.+.. ..+++|++|++||+++.+...+.....+. .....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~----------~~~~~d~ii~~GD~~~~~~~~~~~~~~~~-~~~~~-------- 61 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIA----------AENKPDFIIFLGDLVDGGNPSEEWRAQFW-FFIRL-------- 61 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHH----------HHTTTSEEEEESTSSSSSSHHHHHHHHHH-HHHHH--------
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHh----------ccCCCCEEEeeccccccccccccchhhhc-cchhh--------
Confidence 468999999654433321222222111 13466999999999998766544444331 01100
Q ss_pred ccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHHHHHhhc-ccc--CC-ccccCCCcceEEEECCCcEEEEE
Q 001736 462 KDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICH-KSW--LG-GWFMPQKKSYFALQLPKGWWVFG 537 (1019)
Q Consensus 462 ~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~-r~~--lg-GW~mpQ~~SYFAlrLp~~wWLlG 537 (1019)
.. ...+++.++||||++............ ... .. ++...++. ......... +...
T Consensus 62 ------------------~~-~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~ 120 (200)
T PF00149_consen 62 ------------------LN-PKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNN-KVIFDNDNF-WFNS 120 (200)
T ss_dssp ------------------HH-TTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESS-EEEEEETTE-EEEE
T ss_pred ------------------hh-ccccccccccccccceeccccccccccccccccccccccccCcc-eeeeccccc-cccc
Confidence 01 224499999999998654432222111 110 00 01111111 012222221 2222
Q ss_pred EecCCCCCCC-HHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCc-chhhhHHHHHhhh-CCceeEEEcCccCCC
Q 001736 538 LDLALHCDID-VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNV-SGKNVKHLICDYL-KGRCKLRIAGDMHHY 614 (1019)
Q Consensus 538 LDsql~gdID-~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~-~~~~l~~Lle~~L-~~RV~LvLAGHiHhY 614 (1019)
.+........ ..|..|..........+.+++||++|+|.+......... ........++.++ +.+|+++++||+|.|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 121 GNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccccccchhcccccccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 2221111122 233333333333334567899999999999876433210 0112223334444 679999999999986
No 15
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.42 E-value=1.5e-12 Score=136.91 Aligned_cols=135 Identities=13% Similarity=0.062 Sum_probs=79.0
Q ss_pred CCCcEEEeCCCCCCCC-ChhHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCCC-----------------C
Q 001736 483 DGPQCYIIPGNHDWFD-GLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALH-----------------C 544 (1019)
Q Consensus 483 ~gP~vfAIPGNHDWyD-GL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLp~~wWLlGLDsql~-----------------g 544 (1019)
++| +|+||||||+|. +.+.+.+.+.. .++....+ .++.++. +.|+|++.... +
T Consensus 71 ~~~-v~~V~GNHD~~~~~~~~~~~~l~~----~~~~~~~n---~~~~~~~-i~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
T cd07393 71 PGT-KVLLKGNHDYWWGSASKLRKALEE----SRLALLFN---NAYIDDD-VAICGTRGWDNPGNPWPPINETLKVEEDE 141 (232)
T ss_pred CCC-eEEEeCCccccCCCHHHHHHHHHh----cCeEEecc---CcEEECC-EEEEEEEeeCCCCCccccccccccchhHH
Confidence 345 899999999864 34444443332 22322212 2344554 89999874211 1
Q ss_pred CCCHHHHHHHHHHHHhhcCC--CCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcceeecCC
Q 001736 545 DIDVYQFKFFAELVKEQVGE--RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPS 622 (1019)
Q Consensus 545 dID~~Q~~wFe~ll~~~v~~--~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~~~~~ 622 (1019)
.+...|++|+++.+++..+. +.++|+++|+|.+..+. ....+...++ +.+++++++||+|++++..|-.+
T Consensus 142 ~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~-----~~~~~~~~~~---~~~v~~vl~GH~H~~~~~~~~~~ 213 (232)
T cd07393 142 KIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENG-----DDSPISKLIE---EYGVDICVYGHLHGVGRDRAING 213 (232)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC-----CHHHHHHHHH---HcCCCEEEECCCCCCcccccccc
Confidence 11246899999988642222 24699999999876542 1122333334 44899999999999988664432
Q ss_pred CCCcccceEEEecC
Q 001736 623 DGPVYVQHLLVNGC 636 (1019)
Q Consensus 623 ~G~~~~~~lIVsGG 636 (1019)
. ..+.+|.++..
T Consensus 214 ~--~~gi~~~~~~~ 225 (232)
T cd07393 214 E--RGGIRYQLVSA 225 (232)
T ss_pred e--ECCEEEEEEcc
Confidence 1 12334555444
No 16
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.31 E-value=3.1e-11 Score=126.05 Aligned_cols=178 Identities=23% Similarity=0.341 Sum_probs=108.1
Q ss_pred EEEEEecc--CC-CCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCChhhhhhc--cccchhhhcCCC
Q 001736 383 WFDFMADT--GD-GGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERR--LFRPFEYALQPP 457 (1019)
Q Consensus 383 wFd~VADt--GD-G~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~R--fv~PYe~Al~~~ 457 (1019)
.|..++|+ |. +.+++-.++.++++-. .+++|+||++||++-. |..++|+.. +.+ ..
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~-----------~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~----~~--- 62 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIE-----------QLKPDLLVVTGDLTND-GEPEEYRRLKELLA----RL--- 62 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHh-----------cCCCCEEEEccCcCCC-CCHHHHHHHHHHHh----hc---
Confidence 46778888 42 4455555555554422 3456999999999987 777677643 211 00
Q ss_pred CCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEECC-CcEEEE
Q 001736 458 PWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLP-KGWWVF 536 (1019)
Q Consensus 458 ~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLp-~~wWLl 536 (1019)
..+.| ++.+|||||-+..-...........+ .+...... .+|+++
T Consensus 63 -----------------------~~~~~-~~~vpGNHD~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 108 (301)
T COG1409 63 -----------------------ELPAP-VIVVPGNHDARVVNGEAFSDQFFNRY----------AVLVGACSSGGWRVI 108 (301)
T ss_pred -----------------------cCCCc-eEeeCCCCcCCchHHHHhhhhhcccC----------cceEeeccCCceEEE
Confidence 11334 99999999987764433332221110 11111111 469999
Q ss_pred EEecCC----CCCCCHHHHHHHHHHHHhhcCCC--CeEEEEecCCCccccccccCcchhhhHHHHHhhhCCc--eeEEEc
Q 001736 537 GLDLAL----HCDIDVYQFKFFAELVKEQVGER--DSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGR--CKLRIA 608 (1019)
Q Consensus 537 GLDsql----~gdID~~Q~~wFe~ll~~~v~~~--d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~R--V~LvLA 608 (1019)
++|+.. .|.++..|++|+++.+++ .... +.+|+++|||........+...-.+...+........ ++++|+
T Consensus 109 ~~d~~~~~~~~G~~~~~q~~~l~~~l~~-~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~ 187 (301)
T COG1409 109 GLDSSVPGVPLGRLGAEQLDWLEEALAA-APERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLS 187 (301)
T ss_pred EecCCCCCCCCCEECHHHHHHHHHHHHh-CccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEe
Confidence 999975 367889999999999974 2222 3788999999887765543322111112222222334 999999
Q ss_pred CccCCC
Q 001736 609 GDMHHY 614 (1019)
Q Consensus 609 GHiHhY 614 (1019)
||+|--
T Consensus 188 GH~H~~ 193 (301)
T COG1409 188 GHIHLA 193 (301)
T ss_pred Cccccc
Confidence 999943
No 17
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.27 E-value=5.6e-11 Score=127.87 Aligned_cols=121 Identities=18% Similarity=0.147 Sum_probs=77.8
Q ss_pred CcEEEeCCCCCCCCC-------hhHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCCC-----CCCCHHHHH
Q 001736 485 PQCYIIPGNHDWFDG-------LNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALH-----CDIDVYQFK 552 (1019)
Q Consensus 485 P~vfAIPGNHDWyDG-------L~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLp~~wWLlGLDsql~-----gdID~~Q~~ 552 (1019)
.+++.||||||..-+ ...|.++|.. .++++..++ |.+++||+... +.+...|.+
T Consensus 85 ~pv~~VpGNHDig~~~~~~~~~~~rf~~~Fg~-------------~~~~~~~~~-~~fV~Lds~~l~~~~~~~~~~~~~~ 150 (257)
T cd08163 85 KMVESLPGNHDIGFGNGVVLPVRQRFEKYFGP-------------TSRVIDVGN-HTFVILDTISLSNKDDPDVYQPPRE 150 (257)
T ss_pred ceEEEeCCCcccCCCCCCCHHHHHHHHHHhCC-------------CceEEEECC-EEEEEEccccccCCcccccchhHHH
Confidence 349999999997322 2334444431 246788775 89999999742 235568999
Q ss_pred HHHHHHHhhcCCCCeEEEEecCCCccccccc------cCc-----ch---h-hhHH-HHHhhh-CCceeEEEcCccCCCc
Q 001736 553 FFAELVKEQVGERDSVIIMTHEPNWLLDWYF------NNV-----SG---K-NVKH-LICDYL-KGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 553 wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~------~~~-----~~---~-~l~~-Lle~~L-~~RV~LvLAGHiHhYs 615 (1019)
|+++.++ +.+++.++||++|+|.|-..... ... .+ + .+.+ .-+++| .-+.+++||||+|.|=
T Consensus 151 ~l~~~l~-~~~~~~p~ILl~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C 229 (257)
T cd08163 151 FLHSFSA-MKVKSKPRILLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYC 229 (257)
T ss_pred HHHhhhh-ccCCCCcEEEEeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccc
Confidence 9999875 34567899999999999764321 000 01 1 1111 112222 3488999999999987
Q ss_pred ceeec
Q 001736 616 RHSYV 620 (1019)
Q Consensus 616 R~~~~ 620 (1019)
.+.-.
T Consensus 230 ~~~h~ 234 (257)
T cd08163 230 EVVHE 234 (257)
T ss_pred eeEcc
Confidence 66533
No 18
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.22 E-value=8.2e-11 Score=120.13 Aligned_cols=77 Identities=19% Similarity=0.061 Sum_probs=50.9
Q ss_pred CCCCCCHHHHHHHHHHHHhhc---CCCCeEEEEecCCCcccccccc----------C-c-chhhhHHHHHhhh-CCceeE
Q 001736 542 LHCDIDVYQFKFFAELVKEQV---GERDSVIIMTHEPNWLLDWYFN----------N-V-SGKNVKHLICDYL-KGRCKL 605 (1019)
Q Consensus 542 l~gdID~~Q~~wFe~ll~~~v---~~~d~VIL~tHeP~w~~d~~~~----------~-~-~~~~l~~Lle~~L-~~RV~L 605 (1019)
..+.++..|.+||++.+++.. ....+.++++|+|.......+. + . ...+...+++.+. ..+|++
T Consensus 88 ~~g~l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~ 167 (199)
T cd07383 88 GYDWIRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKG 167 (199)
T ss_pred CCCCCCHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEE
Confidence 456788999999999987421 3557999999999876533211 1 0 0112223444443 578999
Q ss_pred EEcCccCCCccee
Q 001736 606 RIAGDMHHYMRHS 618 (1019)
Q Consensus 606 vLAGHiHhYsR~~ 618 (1019)
+++||+|.++...
T Consensus 168 v~~GH~H~~~~~~ 180 (199)
T cd07383 168 VFCGHDHGNDFCG 180 (199)
T ss_pred EEeCCCCCcceec
Confidence 9999999876543
No 19
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.20 E-value=1.8e-10 Score=113.86 Aligned_cols=142 Identities=16% Similarity=0.220 Sum_probs=83.5
Q ss_pred CccEEEEcccccCcCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChh
Q 001736 422 RGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLN 501 (1019)
Q Consensus 422 RgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~ 501 (1019)
++|+||++||++.. ++.++|+. + +.. ++.+.| ++.||||||...-
T Consensus 23 ~~D~vv~~GDl~~~-~~~~~~~~-~-~~l-----------------------------~~~~~p-~~~v~GNHD~~~~-- 67 (188)
T cd07392 23 EADAVIVAGDITNF-GGKEAAVE-I-NLL-----------------------------LAIGVP-VLAVPGNCDTPEI-- 67 (188)
T ss_pred CCCEEEECCCccCc-CCHHHHHH-H-HHH-----------------------------HhcCCC-EEEEcCCCCCHHH--
Confidence 56999999998864 33333321 1 111 122334 9999999996322
Q ss_pred HHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCC------CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCC
Q 001736 502 TFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLAL------HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEP 575 (1019)
Q Consensus 502 aF~R~F~~r~~lgGW~mpQ~~SYFAlrLp~~wWLlGLDsql------~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP 575 (1019)
.... . .++.....+ .+.++ +|.++|+|+.. .+..+..|.+|+ +.+. ..+++.+|+++|+|
T Consensus 68 --~~~~-~----~~~~~~~~~---~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~--~~~~~~~ilv~H~p 133 (188)
T cd07392 68 --LGLL-T----SAGLNLHGK---VVEVG-GYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLN--NLLAKNLILVTHAP 133 (188)
T ss_pred --HHhh-h----cCcEecCCC---EEEEC-CEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhh--ccCCCCeEEEECCC
Confidence 1111 1 112222221 23455 49999998742 234567889888 3332 24568999999999
Q ss_pred Cccc--cccccC--cchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 576 NWLL--DWYFNN--VSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 576 ~w~~--d~~~~~--~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
++.. +..... .....+.+++++ .+++++|+||+|.-.
T Consensus 134 p~~~~~d~~~~~~~~g~~~l~~li~~---~~~~~~l~GH~H~~~ 174 (188)
T cd07392 134 PYGTAVDRVSGGFHVGSKAIRKFIEE---RQPLLCICGHIHESR 174 (188)
T ss_pred CcCCcccccCCCCccCCHHHHHHHHH---hCCcEEEEecccccc
Confidence 9752 211111 122345556654 488999999999743
No 20
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.18 E-value=5e-10 Score=120.67 Aligned_cols=197 Identities=14% Similarity=0.124 Sum_probs=107.4
Q ss_pred CCCeEEEEEeccCCC-CCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCChhhhhhccccchhhhcCCC
Q 001736 379 KEDLWFDFMADTGDG-GNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPP 457 (1019)
Q Consensus 379 d~~~wFd~VADtGDG-~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~ 457 (1019)
.+++.+.+++|+-.+ +.+.-...+++.+-+ ..++|+|+++||++..+ ..++.+ .+ ...++
T Consensus 47 ~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~-----------~~~pDlVli~GD~~d~~-~~~~~~-~~----~~~L~-- 107 (271)
T PRK11340 47 AAPFKILFLADLHYSRFVPLSLISDAIALGI-----------EQKPDLILLGGDYVLFD-MPLNFS-AF----SDVLS-- 107 (271)
T ss_pred CCCcEEEEEcccCCCCcCCHHHHHHHHHHHH-----------hcCCCEEEEccCcCCCC-ccccHH-HH----HHHHH--
Confidence 357999999999655 333223344333211 23569999999977521 111111 11 11111
Q ss_pred CCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChh---HHHHHhhccccCCccccCCCcceEEEECCC-cE
Q 001736 458 PWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLN---TFMRFICHKSWLGGWFMPQKKSYFALQLPK-GW 533 (1019)
Q Consensus 458 ~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~---aF~R~F~~r~~lgGW~mpQ~~SYFAlrLp~-~w 533 (1019)
+++. ..| +|+++||||++.+.. .+.+.+. ..|+..-++.+. .++.+. ..
T Consensus 108 --------------------~L~~-~~p-v~~V~GNHD~~~~~~~~~~~~~~l~----~~gi~lL~n~~~-~i~~~~~~i 160 (271)
T PRK11340 108 --------------------PLAE-CAP-TFACFGNHDRPVGTEKNHLIGETLK----SAGITVLFNQAT-VIATPNRQF 160 (271)
T ss_pred --------------------HHhh-cCC-EEEecCCCCcccCccchHHHHHHHH----hcCcEEeeCCeE-EEeeCCcEE
Confidence 1121 235 999999999875432 2222222 245655555443 455443 37
Q ss_pred EEEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCC
Q 001736 534 WVFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (1019)
Q Consensus 534 WLlGLDsql~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHh 613 (1019)
+|+|+|+-..+..+.. +..++++..|+++|+|..... .-+.+++|.||||+|+
T Consensus 161 ~i~G~~d~~~~~~~~~----------~~~~~~~~~IlL~H~P~~~~~-----------------~~~~~~dL~lsGHTHG 213 (271)
T PRK11340 161 ELVGTGDLWAGQCKPP----------PASEANLPRLVLAHNPDSKEV-----------------MRDEPWDLMLCGHTHG 213 (271)
T ss_pred EEEEecchhccCCChh----------HhcCCCCCeEEEEcCCChhHh-----------------hccCCCCEEEeccccC
Confidence 8999986433322211 112347899999999986321 1134789999999996
Q ss_pred Ccce--------eec----CCCCC--cccceEEEecCCCCcCCccccCCc
Q 001736 614 YMRH--------SYV----PSDGP--VYVQHLLVNGCGGAFLHPTHVFSN 649 (1019)
Q Consensus 614 YsR~--------~~~----~~~G~--~~~~~lIVsGGGGAfLhPTH~~~~ 649 (1019)
=|-. .+. ...|- ....+++||-|-|.. .|.|....
T Consensus 214 GQi~lP~~~~~~~~~~~~~~~~G~~~~~~~~l~Vs~G~G~~-~p~R~~~~ 262 (271)
T PRK11340 214 GQLRVPLVGEPFAPVEDKRYVAGLNAFGERQIYTTRGVGSL-YGLRLNCR 262 (271)
T ss_pred CeEEccccCccccccccCcccCCcEEeCCcEEEEeCCccCC-cCCcccCC
Confidence 3322 111 11222 123456676666754 57766543
No 21
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.12 E-value=1.1e-09 Score=112.26 Aligned_cols=198 Identities=18% Similarity=0.198 Sum_probs=110.8
Q ss_pred CeEEEEEeccCCCCCC-chHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCChhhhhhccccchhhhcCCCCC
Q 001736 381 DLWFDFMADTGDGGNS-SYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPW 459 (1019)
Q Consensus 381 ~~wFd~VADtGDG~nS-tYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~ 459 (1019)
++.+.+++|+-.+... .....+++.+-. ..++|+++++||++......+ ..+.+.+..
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~-----------~~~~d~vl~~GD~~~~~~~~~---~~~~~~l~~------- 59 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKIN-----------ALKPDLVVLTGDLVDGSVDVL---ELLLELLKK------- 59 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHh-----------ccCCCEEEEcCcccCCcchhh---HHHHHHHhc-------
Confidence 3678999999544332 223444443221 123589999999988654332 112111210
Q ss_pred CcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHH-HHHhhccccCCccccCCCcceEEEECCC-cEEEEE
Q 001736 460 YKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTF-MRFICHKSWLGGWFMPQKKSYFALQLPK-GWWVFG 537 (1019)
Q Consensus 460 ~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF-~R~F~~r~~lgGW~mpQ~~SYFAlrLp~-~wWLlG 537 (1019)
++. ..| +++++||||++.+.... .+.+- ..|+..-.+. +..++... ...+.|
T Consensus 60 -------------------l~~-~~~-v~~v~GNHD~~~~~~~~~~~~l~----~~~v~~L~~~-~~~~~~~~~~i~i~G 113 (223)
T cd07385 60 -------------------LKA-PLG-VYAVLGNHDYYSGDEENWIEALE----SAGITVLRNE-SVEISVGGATIGIAG 113 (223)
T ss_pred -------------------cCC-CCC-EEEECCCcccccCchHHHHHHHH----HcCCEEeecC-cEEeccCCeEEEEEe
Confidence 111 224 99999999998875543 22222 1234433332 23454433 256777
Q ss_pred EecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcce
Q 001736 538 LDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (1019)
Q Consensus 538 LDsql~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~ 617 (1019)
++.... +.+.+.+.++ +.++++..|+++|.|...... -+.++++++|||+|..|-.
T Consensus 114 ~~~~~~------~~~~~~~~~~-~~~~~~~~I~l~H~P~~~~~~-----------------~~~~~dl~l~GHtHggqi~ 169 (223)
T cd07385 114 VDDGLG------RRPDLEKALK-GLDEDDPNILLAHQPDTAEEA-----------------AAWGVDLQLSGHTHGGQIR 169 (223)
T ss_pred ccCccc------cCCCHHHHHh-CCCCCCCEEEEecCCChhHHh-----------------cccCccEEEeccCCCCEEe
Confidence 654322 1233444443 356678999999999853321 1458999999999977655
Q ss_pred eecC------------CCCC--cccceEEEecCCCCcCCccccCCc
Q 001736 618 SYVP------------SDGP--VYVQHLLVNGCGGAFLHPTHVFSN 649 (1019)
Q Consensus 618 ~~~~------------~~G~--~~~~~lIVsGGGGAfLhPTH~~~~ 649 (1019)
.+.. .+|- ....+++||-|-|...-|.|....
T Consensus 170 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~Vs~G~G~~~~~~R~~~~ 215 (223)
T cd07385 170 LPGIGPLVLSKLARPYDYGLYRKGGSQLYVSRGLGTWGPPLRLGCP 215 (223)
T ss_pred ccccccccchhhcCcccceEEEECCEEEEEcCCccCCCCchhcCCC
Confidence 4332 1111 113367777777776667666543
No 22
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.06 E-value=7.9e-09 Score=119.71 Aligned_cols=126 Identities=12% Similarity=0.159 Sum_probs=85.0
Q ss_pred cceEEEE-CCCcEEEEEEecCC-----CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccC-----cchhh
Q 001736 522 KSYFALQ-LPKGWWVFGLDLAL-----HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNN-----VSGKN 590 (1019)
Q Consensus 522 ~SYFAlr-Lp~~wWLlGLDsql-----~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~-----~~~~~ 590 (1019)
..||+++ .++ |.+|+||++. .+.++..|++||++.|++ .+++++||++|||.|..+.-..+ ....+
T Consensus 291 ~~YYSFd~~gg-vrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~--a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~n 367 (496)
T TIGR03767 291 TGYYTFDIAGG-VRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA--SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRHL 367 (496)
T ss_pred CceEEEEeECC-EEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc--CCCCCEEEEECCCCccccccccccccccccccC
Confidence 4699999 565 9999999975 367899999999999974 45678999999999875432111 11122
Q ss_pred hHHHHHhhhCC-ceeEEEcCccCCCc-c-eeecCCCCCcccceEEEecCCCCcCCccccCCcc
Q 001736 591 VKHLICDYLKG-RCKLRIAGDMHHYM-R-HSYVPSDGPVYVQHLLVNGCGGAFLHPTHVFSNF 650 (1019)
Q Consensus 591 l~~Lle~~L~~-RV~LvLAGHiHhYs-R-~~~~~~~G~~~~~~lIVsGGGGAfLhPTH~~~~~ 650 (1019)
.+++++-+-++ +|.++|+||+|.-. - +.+.++.+++.+-.=|+++.-=-|-|+-|.++-.
T Consensus 368 ~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSlvdfPq~~Ri~Ei~ 430 (496)
T TIGR03767 368 GTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASHIDFPQQGRIIELA 430 (496)
T ss_pred HHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccccccCCCCceEEEEE
Confidence 33333333254 79999999999432 2 2222222233333558888888888888887754
No 23
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.02 E-value=1.8e-09 Score=113.68 Aligned_cols=63 Identities=17% Similarity=0.173 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHhhcCCCCeEEEEecCCCccccc-------cccC----cchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 548 VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDW-------YFNN----VSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 548 ~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~-------~~~~----~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
+.|++|+++.+++ .+++++||+||+|+-.... .++. .....+.+++++ ++++++++||+|.-.
T Consensus 149 ~~~l~~l~~~l~~--~~~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~---~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 149 AIVLKQLKKQLNQ--LDNKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVK---YEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHHHHHHHHh--cCCCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHH---hCCCEEEECCccCCC
Confidence 5789999999864 3457899999998743210 1111 011344455554 489999999999754
No 24
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.95 E-value=1.9e-08 Score=106.88 Aligned_cols=174 Identities=14% Similarity=0.141 Sum_probs=100.7
Q ss_pred eEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCChhhhhhccccchhhhcCCCCCCc
Q 001736 382 LWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYK 461 (1019)
Q Consensus 382 ~wFd~VADtGDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~ 461 (1019)
..+..++|+=+ ..-++.++++... ..++|++|++||++..++..++|..-+ +..
T Consensus 5 ~kIl~iSDiHg---n~~~le~l~~~~~-----------~~~~D~vv~~GDl~~~g~~~~~~~~~l-~~l----------- 58 (224)
T cd07388 5 RYVLATSNPKG---DLEALEKLVGLAP-----------ETGADAIVLIGNLLPKAAKSEDYAAFF-RIL----------- 58 (224)
T ss_pred eEEEEEEecCC---CHHHHHHHHHHHh-----------hcCCCEEEECCCCCCCCCCHHHHHHHH-HHH-----------
Confidence 35788899953 2233444443211 124699999999999865566664322 211
Q ss_pred ccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHHHH-Hhhcc-ccCCccccCCCcceEEEECCCcEEEEEEe
Q 001736 462 KDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMR-FICHK-SWLGGWFMPQKKSYFALQLPKGWWVFGLD 539 (1019)
Q Consensus 462 ~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R-~F~~r-~~lgGW~mpQ~~SYFAlrLp~~wWLlGLD 539 (1019)
++...| +++||||||- .+..+++ .+... ..........+ .++...+..|+|+|
T Consensus 59 ------------------~~l~~p-v~~V~GNhD~--~v~~~l~~~~~~~~~~p~~~~lh~~----~~~~~g~~~~~GlG 113 (224)
T cd07388 59 ------------------GEAHLP-TFYVPGPQDA--PLWEYLREAYNAELVHPEIRNVHET----FAFWRGPYLVAGVG 113 (224)
T ss_pred ------------------HhcCCc-eEEEcCCCCh--HHHHHHHHHhcccccCccceecCCC----eEEecCCeEEEEec
Confidence 112234 9999999994 2434433 22111 01122333222 24444447899999
Q ss_pred cCCCC--CCCHHHH----HHHHH----HHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcC
Q 001736 540 LALHC--DIDVYQF----KFFAE----LVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAG 609 (1019)
Q Consensus 540 sql~g--dID~~Q~----~wFe~----ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAG 609 (1019)
-.+.. ..++.|. +|+.+ .+.+ . ...+.||++|+|++-.+..+ .....++.+++++ +.++.++|
T Consensus 114 Gs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~-~-~~~~~VLv~H~PP~g~g~~h--~GS~alr~~I~~~---~P~l~i~G 186 (224)
T cd07388 114 GEIADEGEPEEHEALRYPAWVAEYRLKALWE-L-KDYRKVFLFHTPPYHKGLNE--QGSHEVAHLIKTH---NPLVVLVG 186 (224)
T ss_pred CCcCCCCCcCHHHHhhhhhhHHHHHHHHHHh-C-CCCCeEEEECCCCCCCCCCc--cCHHHHHHHHHHh---CCCEEEEc
Confidence 55432 3455552 34333 3322 2 46799999999999774222 3445677788865 89999999
Q ss_pred ccCC
Q 001736 610 DMHH 613 (1019)
Q Consensus 610 HiHh 613 (1019)
|+||
T Consensus 187 Hih~ 190 (224)
T cd07388 187 GKGQ 190 (224)
T ss_pred CCce
Confidence 9993
No 25
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.76 E-value=2.7e-08 Score=95.85 Aligned_cols=50 Identities=12% Similarity=-0.011 Sum_probs=31.5
Q ss_pred EEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcceee
Q 001736 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSY 619 (1019)
Q Consensus 569 IL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~~ 619 (1019)
|+++|+|.+.......... .+.+.+++-+.+.+++++++||+|.......
T Consensus 81 iv~~Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 81 IVVLHHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred EEEecCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 9999999987643221111 1233333333366999999999998765543
No 26
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.75 E-value=3.7e-08 Score=97.62 Aligned_cols=52 Identities=17% Similarity=0.113 Sum_probs=31.5
Q ss_pred CeEEEEecCCCccccccccCcc-hhh--hHHHHHhhh-CCceeEEEcCccCCCcce
Q 001736 566 DSVIIMTHEPNWLLDWYFNNVS-GKN--VKHLICDYL-KGRCKLRIAGDMHHYMRH 617 (1019)
Q Consensus 566 d~VIL~tHeP~w~~d~~~~~~~-~~~--l~~Lle~~L-~~RV~LvLAGHiHhYsR~ 617 (1019)
+++||++|||+...+....+.. ..+ ....+.+.+ +.+|+++++||+|.....
T Consensus 97 ~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~ 152 (166)
T cd07404 97 GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDY 152 (166)
T ss_pred CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccceE
Confidence 6999999999987643221111 011 111123333 568999999999976433
No 27
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=98.67 E-value=7.1e-08 Score=98.23 Aligned_cols=123 Identities=15% Similarity=0.095 Sum_probs=64.7
Q ss_pred CcEEEeCCCCCCCCChhHHHHHhhccccCCccccC----CCcceEEEEC-CCcEEEEEEecCCCCCCCHHHHHHHHHHHH
Q 001736 485 PQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMP----QKKSYFALQL-PKGWWVFGLDLALHCDIDVYQFKFFAELVK 559 (1019)
Q Consensus 485 P~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mp----Q~~SYFAlrL-p~~wWLlGLDsql~gdID~~Q~~wFe~ll~ 559 (1019)
.++++++||||.+.+........ ...++... .......... ..+..|+|++....... ..+.+..++...
T Consensus 77 ~~v~~~~GNHD~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~~~-~~~~~~~~~~~~ 151 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGALSPLL----ALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRSRL-RDLLADAELRPR 151 (223)
T ss_pred CCEEEecCCCCCccccccccchH----hhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHHHH-HHHHHHHHHHhh
Confidence 44999999999987754432211 11122211 0111122222 23477888875432211 122223233332
Q ss_pred hhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcce
Q 001736 560 EQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (1019)
Q Consensus 560 ~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~ 617 (1019)
+..+++..|+++|.|......... .. ....++.+...+++++++||+|..+..
T Consensus 152 -~~~~~~~~Il~~H~~~~~~~~~~~---~~-~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 152 -PLDPDDFNILLLHGGVAGAGPSDS---ER-APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred -ccCCCCcEEEEEeeeeecCCCCcc---cc-cccCcHhhcCcCCCEEECCCcccCeee
Confidence 356678999999999754432111 00 111223333668999999999986544
No 28
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=98.62 E-value=5.5e-07 Score=104.15 Aligned_cols=91 Identities=16% Similarity=0.138 Sum_probs=57.8
Q ss_pred eEEEECCCcE--EEEEEecCC-----------CCCCCHHHHHHHHHHHHhhcC-CCCeEEEEecCCCccc-cccc---c-
Q 001736 524 YFALQLPKGW--WVFGLDLAL-----------HCDIDVYQFKFFAELVKEQVG-ERDSVIIMTHEPNWLL-DWYF---N- 584 (1019)
Q Consensus 524 YFAlrLp~~w--WLlGLDsql-----------~gdID~~Q~~wFe~ll~~~v~-~~d~VIL~tHeP~w~~-d~~~---~- 584 (1019)
||+++.-.+| .+|+||+-. ++.+|..|++||++.|++ .+ .+..||++.|+|.... .... .
T Consensus 294 yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~-a~a~~p~VVV~hHpPi~t~gi~~md~w~~ 372 (492)
T TIGR03768 294 CYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELAR-GQADGQLMIIAAHIPIAVSPIGSEMEWWL 372 (492)
T ss_pred eeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHh-CcCCCceEEEEeCCCcccCCccchhhhcc
Confidence 9999954335 999999764 345899999999999974 44 4456777788887752 2111 0
Q ss_pred --------CcchhhhHHHHHhhh-C-CceeEEEcCccC-CCcc
Q 001736 585 --------NVSGKNVKHLICDYL-K-GRCKLRIAGDMH-HYMR 616 (1019)
Q Consensus 585 --------~~~~~~l~~Lle~~L-~-~RV~LvLAGHiH-hYsR 616 (1019)
-+.+..... +.++| + .+|.++||||+| +..+
T Consensus 373 ~~~~~~~~L~n~~~~~e-LlaLL~~hPnVla~LsGHvHrn~v~ 414 (492)
T TIGR03768 373 GAADANPDLQNAVSLTG-LVTTLQKYPNLLMWIAGHRHLNTVK 414 (492)
T ss_pred ccccccccccccccHHH-HHHHHhcCCCeEEEEcCCccccccc
Confidence 001111112 23333 3 379999999999 4433
No 29
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.61 E-value=2.1e-07 Score=102.25 Aligned_cols=209 Identities=18% Similarity=0.133 Sum_probs=107.8
Q ss_pred CCCCCeEEEEEeccC-CCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCc--CCChhhhhhccccchhhh
Q 001736 377 SEKEDLWFDFMADTG-DGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYP--NPSAFTYERRLFRPFEYA 453 (1019)
Q Consensus 377 ~~d~~~wFd~VADtG-DG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP--~gs~e~Y~~Rfv~PYe~A 453 (1019)
....++.+..++|+= ..+. .-..+.+.+-.+ ..| |+++++||++.- ....+.....+ ++
T Consensus 40 ~~~~~~~iv~lSDlH~~~~~-~~~~~~~~~i~~----------~~~--DlivltGD~~~~~~~~~~~~~~~~L-~~---- 101 (284)
T COG1408 40 ASLQGLKIVQLSDLHSLPFR-EEKLALLIAIAN----------ELP--DLIVLTGDYVDGDRPPGVAALALFL-AK---- 101 (284)
T ss_pred cccCCeEEEEeehhhhchhh-HHHHHHHHHHHh----------cCC--CEEEEEeeeecCCCCCCHHHHHHHH-Hh----
Confidence 346778899999993 3332 222333333222 134 999999997763 11111221111 11
Q ss_pred cCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHHH-HHhhccc--c--CCccccCCCcceEEEE
Q 001736 454 LQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFM-RFICHKS--W--LGGWFMPQKKSYFALQ 528 (1019)
Q Consensus 454 l~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~-R~F~~r~--~--lgGW~mpQ~~SYFAlr 528 (1019)
++ +...+|||.|||||+....... ..+.... . -.+....+..+=+--.
T Consensus 102 -------------------------L~--~~~gv~av~GNHd~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (284)
T COG1408 102 -------------------------LK--APLGVFAVLGNHDYGVDRSNVYIGDLLEELGRVVLRNEIAVIDLLALRIEV 154 (284)
T ss_pred -------------------------hh--ccCCEEEEecccccccccccchhhhhhhhcceeeecccchhcccccccccc
Confidence 21 1223999999999998866532 2222111 0 0011111111000011
Q ss_pred CCCcEEEEEEecCCCCCCCHHHHHH---HHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeE
Q 001736 529 LPKGWWVFGLDLALHCDIDVYQFKF---FAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKL 605 (1019)
Q Consensus 529 Lp~~wWLlGLDsql~gdID~~Q~~w---Fe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~L 605 (1019)
....-|..++|.+..... ..+.++ ..+.+ ++.+++.+.|+++|+|...... + .+.++|
T Consensus 155 ~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~IlL~H~P~~~~~~--------------~---~~~~dL 215 (284)
T COG1408 155 GGLDLYLAGVEDILAGLP-LAPFTIGLDIAEAL-KQLDEDLPGILLSHEPDIILQL--------------R---LYGVDL 215 (284)
T ss_pred cccccccccCchHHhhCc-ccccccccchhhhh-ccccccccceEeccCCceehhh--------------c---cCcceE
Confidence 122245666665543322 000000 12222 3567788999999999975431 1 348999
Q ss_pred EEcCccCCCcceeecC-------C-----CCC--cccceEEEecCCCCcCCccccCCc
Q 001736 606 RIAGDMHHYMRHSYVP-------S-----DGP--VYVQHLLVNGCGGAFLHPTHVFSN 649 (1019)
Q Consensus 606 vLAGHiHhYsR~~~~~-------~-----~G~--~~~~~lIVsGGGGAfLhPTH~~~~ 649 (1019)
+||||+|.=|=..|.. . .|. +-..+++||.|-|..--|.|...+
T Consensus 216 vLSGHTHGGQi~~p~~~~l~~~~~~~~~~~g~~~~~~~~lyVSrGlG~~~~p~R~~~~ 273 (284)
T COG1408 216 VLSGHTHGGQIRLPLWGPLVTNALSGRYRAGGLRQFGAQLYVSRGLGTTGPPIRLGCP 273 (284)
T ss_pred EEeccccCCeEEeecccccccccccccccccceecCCceEEEeCCcCCCCCCcccCCC
Confidence 9999999433332211 0 111 112368999999987777777654
No 30
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.61 E-value=2.1e-07 Score=84.58 Aligned_cols=50 Identities=22% Similarity=0.239 Sum_probs=33.0
Q ss_pred EEEecCCCccccccccCcchhhhHHHHHhhh-CCceeEEEcCccCCCcceee
Q 001736 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSY 619 (1019)
Q Consensus 569 IL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L-~~RV~LvLAGHiHhYsR~~~ 619 (1019)
|+++|.|.+........... .....+.+.+ ..++++.++||+|.++++..
T Consensus 70 i~~~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 70 ILLTHGPPYDPLDELSPDED-PGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred EEEeccCCCCCchhhcccch-hhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 99999999987654322111 1122222222 56899999999999988863
No 31
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.40 E-value=1.1e-06 Score=84.93 Aligned_cols=48 Identities=23% Similarity=0.270 Sum_probs=31.4
Q ss_pred CCeEEEEecCCCccccccccC---cchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 565 RDSVIIMTHEPNWLLDWYFNN---VSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 565 ~d~VIL~tHeP~w~~d~~~~~---~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
++..|+++|.|.+....+... .....+.+++++ .++++.++||+|...
T Consensus 67 ~~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 EDTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQR---VRPKLHVFGHIHEGY 117 (135)
T ss_pred CCCEEEEECCCCCcCccccccCcccCCHHHHHHHHH---HCCcEEEEcCcCCcC
Confidence 467899999999865433211 112334444444 478999999999753
No 32
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.01 E-value=1.6e-05 Score=81.09 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=26.5
Q ss_pred EEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcceeecC
Q 001736 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVP 621 (1019)
Q Consensus 569 IL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~~~~ 621 (1019)
|+++|+|.+. +++ +.+++++||||+|.+.+.....
T Consensus 119 i~l~H~p~~~---------------~~~---~~~~~~~lsGH~H~~~~~~~~~ 153 (171)
T cd07384 119 ILLTHIPLYR---------------LLD---TIKPVLILSGHDHDQCEVVHSS 153 (171)
T ss_pred eeEECCccHH---------------HHh---ccCceEEEeCcccCCeEEEecC
Confidence 9999999862 112 3478899999999997776553
No 33
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.99 E-value=2e-05 Score=82.85 Aligned_cols=43 Identities=19% Similarity=0.211 Sum_probs=30.8
Q ss_pred EEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcceeecC
Q 001736 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVP 621 (1019)
Q Consensus 569 IL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~~~~ 621 (1019)
|+++|-|.+.... .-..+.+. +.++++.+|||.|.+..++...
T Consensus 112 i~lsH~P~~~~~~-------~~~~~~~~---~~~p~~Ifs~H~H~s~~~~~~~ 154 (195)
T cd08166 112 IMLSHVPLLAEGG-------QALKHVVT---DLDPDLIFSAHRHKSSIFMYDR 154 (195)
T ss_pred eeeeccccccccc-------HHHHHHHH---hcCceEEEEcCccceeeEEeec
Confidence 9999999986542 11222333 4499999999999988876443
No 34
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=97.84 E-value=0.0001 Score=85.19 Aligned_cols=92 Identities=15% Similarity=0.125 Sum_probs=47.0
Q ss_pred CcceEEEECCCcEEEEEEecCCCCC---------------------CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccc
Q 001736 521 KKSYFALQLPKGWWVFGLDLALHCD---------------------IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLL 579 (1019)
Q Consensus 521 ~~SYFAlrLp~~wWLlGLDsql~gd---------------------ID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~ 579 (1019)
.+.|+.++.++..-|+.||+-..-+ +...|++||++.+++ ....++|+++.-|.-..
T Consensus 252 ~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~--s~a~~kvi~s~v~~~~~ 329 (453)
T PF09423_consen 252 GRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS--SQATWKVIGSSVPFSPL 329 (453)
T ss_dssp ----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH----SSEEEEE-SS--S--
T ss_pred CceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc--CCCcEEEEEeCCceecc
Confidence 4469999999877899999964211 346899999998874 33688898877765322
Q ss_pred cccc-------cCc--chh--hhHHHHHhhhCCce--eEEEcCccCCC
Q 001736 580 DWYF-------NNV--SGK--NVKHLICDYLKGRC--KLRIAGDMHHY 614 (1019)
Q Consensus 580 d~~~-------~~~--~~~--~l~~Lle~~L~~RV--~LvLAGHiHhY 614 (1019)
.... +.+ .+. ..+.|++.+-..++ -++||||+|.-
T Consensus 330 ~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~ 377 (453)
T PF09423_consen 330 NFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHAS 377 (453)
T ss_dssp -SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSE
T ss_pred cccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchh
Confidence 1110 001 111 12233333323344 48999999954
No 35
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=97.70 E-value=0.00062 Score=73.74 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=37.2
Q ss_pred hcCCCCeEEEEecCCCccccccccC-----------cchh-hhHHHHHhhh-CCceeEEEcCccCCCccee
Q 001736 561 QVGERDSVIIMTHEPNWLLDWYFNN-----------VSGK-NVKHLICDYL-KGRCKLRIAGDMHHYMRHS 618 (1019)
Q Consensus 561 ~v~~~d~VIL~tHeP~w~~d~~~~~-----------~~~~-~l~~Lle~~L-~~RV~LvLAGHiHhYsR~~ 618 (1019)
.++++++.|+++|.|..-.....++ .-|+ .+...+.++- +.++++++.||+||=-|+.
T Consensus 142 ~~~~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~ 212 (238)
T cd07397 142 KAPPDLPLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRLRRG 212 (238)
T ss_pred hcCCCCCeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCccccc
Confidence 4677889999999998665422111 0122 3444444442 4568999999999976664
No 36
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=97.64 E-value=8.8e-05 Score=77.96 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=24.4
Q ss_pred EEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCccee
Q 001736 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHS 618 (1019)
Q Consensus 569 IL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~ 618 (1019)
|+++|+|.+... .+.+++++||||+|.=++..
T Consensus 129 ilL~H~P~~~~~------------------~~~~~dl~lSGHtHgGqi~~ 160 (193)
T cd08164 129 ILLTHVPLYKIF------------------LEGKPGLILTGHDHEGCDYQ 160 (193)
T ss_pred EEEEcccceecc------------------ccCCCCEEEeCccCCCeEEE
Confidence 999999987511 03478899999999866654
No 37
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.63 E-value=0.00013 Score=73.39 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=23.9
Q ss_pred EEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcceeec
Q 001736 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYV 620 (1019)
Q Consensus 569 IL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~~~ 620 (1019)
|++.|+|... .+. +.++++.||||+|...+....
T Consensus 107 ~~l~H~p~~~---------------~~~---~~~~~~~l~GH~H~~~~~~~~ 140 (156)
T cd08165 107 ILLQHFPLYR---------------LLQ---WLKPRLVLSGHTHSFCEVTHP 140 (156)
T ss_pred eeeeCChHHH---------------HHH---hhCCCEEEEcccCCCceeEEE
Confidence 8999999732 112 236779999999997666544
No 38
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.54 E-value=0.0023 Score=68.80 Aligned_cols=179 Identities=21% Similarity=0.262 Sum_probs=93.4
Q ss_pred CeEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcC-CChhhhhhccccchhhhcCCCCC
Q 001736 381 DLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPN-PSAFTYERRLFRPFEYALQPPPW 459 (1019)
Q Consensus 381 ~~wFd~VADtGDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~-gs~e~Y~~Rfv~PYe~Al~~~~~ 459 (1019)
.+-+.+++|+=...++.-++....+. -++|+|+++||++|-. +....-.+.. . .++
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~--------------~~~D~lviaGDlt~~~~~~~~~~~~~~-~-~e~------- 59 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAAD--------------IRADLLVIAGDLTYFHFGPKEVAEELN-K-LEA------- 59 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhh--------------ccCCEEEEecceehhhcCchHHHHhhh-H-HHH-------
Confidence 45677888885555544444443322 1469999999999332 2111111110 0 111
Q ss_pred CcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEe
Q 001736 460 YKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLD 539 (1019)
Q Consensus 460 ~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLp~~wWLlGLD 539 (1019)
++....| ++|+|||=|- ..-.+.+.. .|-.+..+ ++++.. .-+.|+.
T Consensus 60 -------------------l~~~~~~-v~avpGNcD~----~~v~~~l~~----~~~~v~~~----v~~i~~-~~~~G~G 106 (226)
T COG2129 60 -------------------LKELGIP-VLAVPGNCDP----PEVIDVLKN----AGVNVHGR----VVEIGG-YGFVGFG 106 (226)
T ss_pred -------------------HHhcCCe-EEEEcCCCCh----HHHHHHHHh----cccccccc----eEEecC-cEEEEec
Confidence 2222334 9999999553 221222111 11222222 456654 3455532
Q ss_pred -cCCCC-----CC-CHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccc----cCcchhhhHHHHHhhhCCceeEEEc
Q 001736 540 -LALHC-----DI-DVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYF----NNVSGKNVKHLICDYLKGRCKLRIA 608 (1019)
Q Consensus 540 -sql~g-----dI-D~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~----~~~~~~~l~~Lle~~L~~RV~LvLA 608 (1019)
++... .. ++.=+..+.+.+++..+ ... |+.+|.|++....-. .+.....++.++++. ++.+.++
T Consensus 107 gsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~-~~~-Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieef---qP~l~i~ 181 (226)
T COG2129 107 GSNPTPFNTPREFSEDEIYSKLKSLVKKADN-PVN-ILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEF---QPLLGLH 181 (226)
T ss_pred ccCCCCCCCccccCHHHHHHHHHHHHhcccC-cce-EEEecCCCCCccccCCCCccccchHHHHHHHHHh---CCceEEE
Confidence 22111 12 22335566666653111 122 999999999653221 111234677888877 8899999
Q ss_pred CccCCCcceeec
Q 001736 609 GDMHHYMRHSYV 620 (1019)
Q Consensus 609 GHiHhYsR~~~~ 620 (1019)
||+|-++-....
T Consensus 182 GHIHEs~G~d~i 193 (226)
T COG2129 182 GHIHESRGIDKI 193 (226)
T ss_pred eeeccccccccc
Confidence 999985444433
No 39
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.45 E-value=0.00067 Score=66.13 Aligned_cols=49 Identities=22% Similarity=0.066 Sum_probs=28.6
Q ss_pred eEEEEecCCCccccccccC--cchhhhHHHHHhhhCCceeEEEcCccCCCccee
Q 001736 567 SVIIMTHEPNWLLDWYFNN--VSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHS 618 (1019)
Q Consensus 567 ~VIL~tHeP~w~~d~~~~~--~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~ 618 (1019)
..|+++|+|.+-.....+. ...+.+.++++ +.++++.|+||+|......
T Consensus 57 ~~Ilv~H~pp~~~~~~~~~~~~g~~~l~~~l~---~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 57 VDILLTHAPPAGIGDGEDFAHRGFEAFLDFID---RFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred cCEEEECCCCCcCcCcccccccCHHHHHHHHH---HHCCcEEEEcCcCCCcCcc
Confidence 5689999998744321110 11222323333 4579999999999544443
No 40
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=97.41 E-value=0.00059 Score=66.90 Aligned_cols=59 Identities=17% Similarity=0.068 Sum_probs=33.6
Q ss_pred CCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCC
Q 001736 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (1019)
Q Consensus 565 ~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGA 639 (1019)
++..|+++|-|.+..... ... ..+++ ..+++++++||+|...... .. ...+|-.|.-|.
T Consensus 74 ~g~~i~v~Hg~~~~~~~~-----~~~-~~~~~---~~~~d~vi~GHtH~~~~~~-~~------~~~~inpGs~~~ 132 (155)
T cd00841 74 GGKRIFLTHGHLYGVKNG-----LDR-LYLAK---EGGADVVLYGHTHIPVIEK-IG------GVLLLNPGSLSL 132 (155)
T ss_pred CCEEEEEECCcccccccc-----hhh-hhhhh---hcCCCEEEECcccCCccEE-EC------CEEEEeCCCccC
Confidence 356788999887644311 011 11222 4478999999999654332 11 225566676553
No 41
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=97.38 E-value=0.0067 Score=64.24 Aligned_cols=119 Identities=18% Similarity=0.166 Sum_probs=62.5
Q ss_pred CCcEEEeCCCCCCCCChhHHHHHhhccc--cCC-ccc-------cCCCcceEEEECCC-cEEEEEEecCCCCCC------
Q 001736 484 GPQCYIIPGNHDWFDGLNTFMRFICHKS--WLG-GWF-------MPQKKSYFALQLPK-GWWVFGLDLALHCDI------ 546 (1019)
Q Consensus 484 gP~vfAIPGNHDWyDGL~aF~R~F~~r~--~lg-GW~-------mpQ~~SYFAlrLp~-~wWLlGLDsql~gdI------ 546 (1019)
++ -++++||||+.-|.+.+...+-+-. +++ +.. .+.-..|-.++... ..-++|+.+......
T Consensus 70 g~-d~~~~GNHe~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~ 148 (252)
T cd00845 70 GY-DAVTIGNHEFDYGLDALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWI 148 (252)
T ss_pred CC-CEEeeccccccccHHHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcc
Confidence 34 3456799998767776655543221 111 110 11112354555542 255777765432111
Q ss_pred ---C-HHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcce
Q 001736 547 ---D-VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (1019)
Q Consensus 547 ---D-~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~ 617 (1019)
+ ....+-+++..++..++.|-||+++|-|.-. ..++.++. ..++++|+||.|.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~~ 209 (252)
T cd00845 149 IGLPFEDLAEAVAVAEELLAEGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLEE 209 (252)
T ss_pred cCceecCHHHHHHHHHHHHhCCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccCC
Confidence 0 1112223332223345679999999988742 11222332 57999999999987653
No 42
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=97.38 E-value=0.0043 Score=66.98 Aligned_cols=133 Identities=20% Similarity=0.156 Sum_probs=69.8
Q ss_pred EEEeCCCCCCCCChhHHHHHhhcc--ccCC-------c-cccCCCcceEEEECCCc-EEEEEEecCCCC--------C--
Q 001736 487 CYIIPGNHDWFDGLNTFMRFICHK--SWLG-------G-WFMPQKKSYFALQLPKG-WWVFGLDLALHC--------D-- 545 (1019)
Q Consensus 487 vfAIPGNHDWyDGL~aF~R~F~~r--~~lg-------G-W~mpQ~~SYFAlrLp~~-wWLlGLDsql~g--------d-- 545 (1019)
-++++||||+.-|.+.+.+.+-+- .+++ + =..++-..|-.++...- .=++|+.+.... .
T Consensus 73 d~~~~GNHefd~g~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~~~~ 152 (257)
T cd07406 73 DLACFGNHEFDFGEDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPEYVR 152 (257)
T ss_pred cEEeecccccccCHHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCCcce
Confidence 466899999977888777755322 1211 0 01112235767776431 335666553211 1
Q ss_pred -CCHHHHHHHHHHHH-hhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcceeecCCC
Q 001736 546 -IDVYQFKFFAELVK-EQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSD 623 (1019)
Q Consensus 546 -ID~~Q~~wFe~ll~-~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~~~~~~ 623 (1019)
.|. .+-+.+.++ .+.+.-|-||+++|-|... ...+.+++ ..++++|+||.|....- ...
T Consensus 153 ~~d~--~~~~~~~v~~~~~~~~D~iVvl~H~g~~~------------d~~la~~~--~~iD~IlgGH~H~~~~~---~~~ 213 (257)
T cd07406 153 YRDY--VETARELVDELREQGADLIIALTHMRLPN------------DKRLAREV--PEIDLILGGHDHEYILV---QVG 213 (257)
T ss_pred EcCH--HHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHHHHHhC--CCCceEEecccceeEee---eEC
Confidence 121 122222221 1123458999999998621 11233433 47999999999986521 111
Q ss_pred CCcccceEEEecCCCCcCC
Q 001736 624 GPVYVQHLLVNGCGGAFLH 642 (1019)
Q Consensus 624 G~~~~~~lIVsGGGGAfLh 642 (1019)
...++-+|+.|.++-
T Consensus 214 ----~t~vv~~g~~g~~vg 228 (257)
T cd07406 214 ----GTPIVKSGSDFRTVY 228 (257)
T ss_pred ----CEEEEeCCcCcceEE
Confidence 224555666665544
No 43
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=97.35 E-value=0.00045 Score=66.57 Aligned_cols=60 Identities=15% Similarity=0.323 Sum_probs=37.2
Q ss_pred CCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCC
Q 001736 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (1019)
Q Consensus 565 ~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGA 639 (1019)
+...|+++|.+.+.... ....+...+. ..+++++++||+|..+..... ...+|..|+-+-
T Consensus 80 ~~~~i~~~H~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~GH~H~~~~~~~~-------~~~~~~~Gs~~~ 139 (156)
T PF12850_consen 80 DGFKILLSHGHPYDVQW-----DPAELREILS---RENVDLVLHGHTHRPQVFKIG-------GIHVINPGSIGG 139 (156)
T ss_dssp TTEEEEEESSTSSSSTT-----THHHHHHHHH---HTTSSEEEESSSSSEEEEEET-------TEEEEEE-GSSS
T ss_pred cCCeEEEECCCCccccc-----Chhhhhhhhc---ccCCCEEEcCCcccceEEEEC-------CEEEEECCcCCC
Confidence 57889999988875431 1122222222 569999999999986655411 236677776554
No 44
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=97.32 E-value=0.0037 Score=65.62 Aligned_cols=48 Identities=23% Similarity=0.315 Sum_probs=36.7
Q ss_pred CCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcceee
Q 001736 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSY 619 (1019)
Q Consensus 564 ~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~~ 619 (1019)
+.+.+|||+|-|+.+.+. +...+.+++++ +||+..+-||+|.-+|-.+
T Consensus 157 ~~~~fivM~HYPP~s~~~-----t~~~~sevlee---~rv~~~lyGHlHgv~~p~~ 204 (230)
T COG1768 157 GVSKFIVMTHYPPFSDDG-----TPGPFSEVLEE---GRVSKCLYGHLHGVPRPNI 204 (230)
T ss_pred CcCeEEEEEecCCCCCCC-----CCcchHHHHhh---cceeeEEeeeccCCCCCCC
Confidence 458999999999987763 23345566664 5999999999999776543
No 45
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.32 E-value=0.00058 Score=73.67 Aligned_cols=164 Identities=21% Similarity=0.301 Sum_probs=76.1
Q ss_pred CccEEEEcccccCcCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCC----------CC-ccccCCCCCcEEEe
Q 001736 422 RGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPS----------GV-PELKQYDGPQCYII 490 (1019)
Q Consensus 422 RgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~i~~~kpe~p~----------~~-~~l~~~~gP~vfAI 490 (1019)
++|.|++.||+.=+.+...+|++--.+--+ | +|++.=+ +. ..|.+ -+++++.|
T Consensus 32 ~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~----------p-----~k~~i~~e~~~~~e~~~~ff~~L~~-~~~p~~~v 95 (255)
T PF14582_consen 32 GPDAVVFVGDLLKAEARSDEYERAQEEQRE----------P-----DKSEINEEECYDSEALDKFFRILGE-LGVPVFVV 95 (255)
T ss_dssp T-SEEEEES-SS-TCHHHHHHHHHHHTT-------------------THHHHHHHHHHHHHHHHHHHHHHC-C-SEEEEE
T ss_pred CCCEEEEeccccccchhhhHHHHHhhhccC----------c-----chhhhhhhhhhhHHHHHHHHHHHHh-cCCcEEEe
Confidence 569999999998887777788721100000 0 0000000 00 01223 34669999
Q ss_pred CCCCCCCCChhHHHHHhhcccc-CCccccCCCcceEEEECCCcEEEEEEecCCCCC--CC-------HHHHHHHHHHHHh
Q 001736 491 PGNHDWFDGLNTFMRFICHKSW-LGGWFMPQKKSYFALQLPKGWWVFGLDLALHCD--ID-------VYQFKFFAELVKE 560 (1019)
Q Consensus 491 PGNHDWyDGL~aF~R~F~~r~~-lgGW~mpQ~~SYFAlrLp~~wWLlGLDsql~gd--ID-------~~Q~~wFe~ll~~ 560 (1019)
|||||=+ +..|+|.-..... ....++-++ |+|-.+-+ +-++|+.-....+ .+ ..-.+|-.+.+.+
T Consensus 96 PG~~Dap--~~~~lr~a~~~e~v~p~~~~vH~-sf~~~~g~--y~v~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~e 170 (255)
T PF14582_consen 96 PGNMDAP--ERFFLREAYNAEIVTPHIHNVHE-SFFFWKGE--YLVAGMGGEITDDQREEEFKLRYPAWEAEYSLKFLRE 170 (255)
T ss_dssp --TTS-S--HHHHHHHHHHCCCC-TTEEE-CT-CEEEETTT--EEEEEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGG
T ss_pred cCCCCch--HHHHHHHHhccceeccceeeeee-eecccCCc--EEEEecCccccCCCccccccccchHHHHHHHHHHHHh
Confidence 9999953 2245554333111 223344444 34333222 5678885332211 11 0123344444432
Q ss_pred hcCCCCeEEEEecCCC-ccccccccCcchhhhHHHHHhhhCCceeEEEcCccCC
Q 001736 561 QVGERDSVIIMTHEPN-WLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (1019)
Q Consensus 561 ~v~~~d~VIL~tHeP~-w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHh 613 (1019)
+. +.+.|++.|-|+ .-.+.. +.....++++|+++ +.+++|+||+|-
T Consensus 171 -lk-~~r~IlLfhtpPd~~kg~~--h~GS~~V~dlIk~~---~P~ivl~Ghihe 217 (255)
T PF14582_consen 171 -LK-DYRKILLFHTPPDLHKGLI--HVGSAAVRDLIKTY---NPDIVLCGHIHE 217 (255)
T ss_dssp -CT-SSEEEEEESS-BTBCTCTB--TTSBHHHHHHHHHH-----SEEEE-SSS-
T ss_pred -cc-cccEEEEEecCCccCCCcc--cccHHHHHHHHHhc---CCcEEEeccccc
Confidence 33 458899999999 222211 12345688899987 899999999995
No 46
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.23 E-value=0.0032 Score=66.73 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=21.3
Q ss_pred CCceeEEEcCccCCCcceeecCCCCCcccceEEEecC
Q 001736 600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGC 636 (1019)
Q Consensus 600 ~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGG 636 (1019)
+.++++.++||+|.=+.+.-.. .|. ...+||.|.
T Consensus 183 ~~~~~~~i~GHtH~~~~~~~~~-~~~--~~~~~~lgd 216 (231)
T TIGR01854 183 RYGVDRLIHGHTHRPAIHPLQA-DGQ--PATRIVLGD 216 (231)
T ss_pred HcCCCEEEECCccCcceeeccc-CCC--ccEEEEECC
Confidence 4589999999999655443221 111 235777775
No 47
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=97.21 E-value=0.01 Score=67.37 Aligned_cols=194 Identities=20% Similarity=0.152 Sum_probs=103.0
Q ss_pred CCCCCeEEEEEecc--CCCCCC------chH------------HHHHhcCcccccccCCCccccCCccEEEEcccccCcC
Q 001736 377 SEKEDLWFDFMADT--GDGGNS------SYS------------VARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPN 436 (1019)
Q Consensus 377 ~~d~~~wFd~VADt--GDG~nS------tYt------------VA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~ 436 (1019)
.+++.+-+..+||+ |.|... .++ |.+.+| .-++|+|+++||+++-
T Consensus 49 ~~~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~--------------sE~PDlVVfTGD~i~g- 113 (379)
T KOG1432|consen 49 REDGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLA--------------SEKPDLVVFTGDNIFG- 113 (379)
T ss_pred cCCCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHh--------------ccCCCEEEEeCCcccc-
Confidence 57889999999999 555211 122 222222 2356999999999997
Q ss_pred CChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChh-HHHHHhhcc-----
Q 001736 437 PSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLN-TFMRFICHK----- 510 (1019)
Q Consensus 437 gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~-aF~R~F~~r----- 510 (1019)
-+.+++++-+..-..-+ -+ .+.++-++.||||=-..++ ..++-|...
T Consensus 114 ~~t~Da~~sl~kAvaP~--------------------------I~-~~IPwA~~lGNHDdes~ltr~ql~~~i~~lP~s~ 166 (379)
T KOG1432|consen 114 HSTQDAATSLMKAVAPA--------------------------ID-RKIPWAAVLGNHDDESDLTRLQLMKFISKLPYSL 166 (379)
T ss_pred cccHhHHHHHHHHhhhH--------------------------hh-cCCCeEEEecccccccccCHHHHHHHHhcCCCcc
Confidence 33445554442322211 12 3455999999999655543 122222211
Q ss_pred --c-cCCccccCCC--cceEEEECC----------CcEEEEEEecCCC----------CCCCHHHHHHHHHHHHhhc---
Q 001736 511 --S-WLGGWFMPQK--KSYFALQLP----------KGWWVFGLDLALH----------CDIDVYQFKFFAELVKEQV--- 562 (1019)
Q Consensus 511 --~-~lgGW~mpQ~--~SYFAlrLp----------~~wWLlGLDsql~----------gdID~~Q~~wFe~ll~~~v--- 562 (1019)
. ...|+...+. ..| -++++ ...=|..||+... +.|...|.+|+++.-.+.+
T Consensus 167 ~~v~p~dg~~~~~~g~gny-n~~i~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~ 245 (379)
T KOG1432|consen 167 SQVNPPDGHMYIIDGFGNY-NLQIEGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPN 245 (379)
T ss_pred ccCCCcccceeeeecccce-EEEeccCCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhccc
Confidence 1 1223322121 233 34442 1234667777532 2456799999999762111
Q ss_pred -CCCC-eEEEEecCCCccccccccC-c------c----hhhhHHHHHhhh-CCceeEEEcCccCC
Q 001736 563 -GERD-SVIIMTHEPNWLLDWYFNN-V------S----GKNVKHLICDYL-KGRCKLRIAGDMHH 613 (1019)
Q Consensus 563 -~~~d-~VIL~tHeP~w~~d~~~~~-~------~----~~~l~~Lle~~L-~~RV~LvLAGHiHh 613 (1019)
..++ +=+..-|-|.=.......+ + + ...-...+..+- +.+|+.+++||.|.
T Consensus 246 ~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHv 310 (379)
T KOG1432|consen 246 SKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHV 310 (379)
T ss_pred CccCCCCceEEEEcccHHHhhccCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccc
Confidence 1223 6677778776333222110 0 0 000112233333 67999999999995
No 48
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=97.19 E-value=0.0017 Score=69.05 Aligned_cols=18 Identities=28% Similarity=0.257 Sum_probs=14.3
Q ss_pred CCceeEEEcCccCCCcce
Q 001736 600 KGRCKLRIAGDMHHYMRH 617 (1019)
Q Consensus 600 ~~RV~LvLAGHiHhYsR~ 617 (1019)
++++++++.||+|.-..+
T Consensus 185 ~~~~~~~i~GH~H~~~~~ 202 (241)
T PRK05340 185 KHGVDTLIHGHTHRPAIH 202 (241)
T ss_pred HhCCCEEEECcccCccee
Confidence 458999999999965444
No 49
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=97.01 E-value=0.0027 Score=63.01 Aligned_cols=14 Identities=21% Similarity=0.188 Sum_probs=12.0
Q ss_pred CCceeEEEcCccCC
Q 001736 600 KGRCKLRIAGDMHH 613 (1019)
Q Consensus 600 ~~RV~LvLAGHiHh 613 (1019)
..+++++++||+|.
T Consensus 104 ~~~~d~vi~GHtH~ 117 (158)
T TIGR00040 104 ELGVDVLIFGHTHI 117 (158)
T ss_pred ccCCCEEEECCCCC
Confidence 45789999999995
No 50
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.00 E-value=0.01 Score=65.06 Aligned_cols=51 Identities=8% Similarity=0.079 Sum_probs=33.5
Q ss_pred CCeEEEEecCCCccccccccC-----------------c-chhhhHHHHHhhhCCceeEEEcCccCC-Cccee
Q 001736 565 RDSVIIMTHEPNWLLDWYFNN-----------------V-SGKNVKHLICDYLKGRCKLRIAGDMHH-YMRHS 618 (1019)
Q Consensus 565 ~d~VIL~tHeP~w~~d~~~~~-----------------~-~~~~l~~Lle~~L~~RV~LvLAGHiHh-YsR~~ 618 (1019)
++.=|++||+|+.--..+.+. . ....++.+++.+ |.+..+|||.|. |++..
T Consensus 164 ~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~l---kPryhf~gH~H~~f~~~~ 233 (262)
T cd00844 164 QPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHL---KPRYWFSAHLHVKFAALV 233 (262)
T ss_pred CCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHh---CCCEEEEecCCcccceec
Confidence 356799999999866443321 1 112344566655 899999999995 66543
No 51
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.97 E-value=0.018 Score=62.45 Aligned_cols=123 Identities=19% Similarity=0.185 Sum_probs=61.6
Q ss_pred EEeCCCCCCCCChhHHHHHhhccc--cC-Cccc-----cCCCcceEEEECCCc--EEEEEEecCCCC---------CC--
Q 001736 488 YIIPGNHDWFDGLNTFMRFICHKS--WL-GGWF-----MPQKKSYFALQLPKG--WWVFGLDLALHC---------DI-- 546 (1019)
Q Consensus 488 fAIPGNHDWyDGL~aF~R~F~~r~--~l-gGW~-----mpQ~~SYFAlrLp~~--wWLlGLDsql~g---------dI-- 546 (1019)
++.+||||+.-|.+.+.+..-.-. ++ .... .+.-.+|..++...| .=++|+=+.... ++
T Consensus 86 ~~~lGNHe~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~ 165 (277)
T cd07410 86 AGTLGNHEFNYGLDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIPNWEKPNLIGGLKF 165 (277)
T ss_pred EEeecccCcccCHHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccccccCcccCCCcEE
Confidence 556799997667776666443211 11 1111 122235767777623 335555322110 11
Q ss_pred -CH-HHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcch-hhhHHHHHhhhCCceeEEEcCccCCCcc
Q 001736 547 -DV-YQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSG-KNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (1019)
Q Consensus 547 -D~-~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~-~~l~~Lle~~L~~RV~LvLAGHiHhYsR 616 (1019)
|. ...+...+.+++ +.-|-||+++|-+.-.... ..... .....+.+++ ..++++|+||.|....
T Consensus 166 ~d~~~~~~~~v~~lr~--~~~D~IIvl~H~g~~~~~~--~~~~~~~~~~~la~~~--~~vD~IlgGHsH~~~~ 232 (277)
T cd07410 166 TDPVETAKKYVPKLRA--EGADVVVVLAHGGFERDLE--ESLTGENAAYELAEEV--PGIDAILTGHQHRRFP 232 (277)
T ss_pred cCHHHHHHHHHHHHHH--cCCCEEEEEecCCcCCCcc--cccCCccHHHHHHhcC--CCCcEEEeCCCccccc
Confidence 21 123333333332 3458999999987653211 00111 1123344443 4799999999997543
No 52
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=96.81 E-value=0.0064 Score=63.45 Aligned_cols=25 Identities=12% Similarity=-0.065 Sum_probs=19.9
Q ss_pred CCcceEEEECCCcEEEEEEecCCCC
Q 001736 520 QKKSYFALQLPKGWWVFGLDLALHC 544 (1019)
Q Consensus 520 Q~~SYFAlrLp~~wWLlGLDsql~g 544 (1019)
+..-|++++++....|+.||+...-
T Consensus 145 ~~~~y~~~~~G~~~~~~~lD~R~~R 169 (228)
T cd07389 145 RGGIYRSFRFGDLVDLILLDTRTYR 169 (228)
T ss_pred CceEEEEEecCCcceEEEEeccccc
Confidence 3457999999987689999987653
No 53
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=96.80 E-value=0.025 Score=61.19 Aligned_cols=112 Identities=13% Similarity=0.061 Sum_probs=58.5
Q ss_pred EeCCCCCCCCChhHHHHHhhccc--cCC------ccccCCCcceEEEECCC-cEEEEEEecCCCCCC---------C-HH
Q 001736 489 IIPGNHDWFDGLNTFMRFICHKS--WLG------GWFMPQKKSYFALQLPK-GWWVFGLDLALHCDI---------D-VY 549 (1019)
Q Consensus 489 AIPGNHDWyDGL~aF~R~F~~r~--~lg------GW~mpQ~~SYFAlrLp~-~wWLlGLDsql~gdI---------D-~~ 549 (1019)
++-||||+.-|.+.+.+.+-+-. ++. +...+.-..|..++... ..=++|+.+...... . ..
T Consensus 87 a~~GNHefd~g~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T cd07411 87 AMVGHWEFTYGPERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGI 166 (264)
T ss_pred EEecccccccCHHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECC
Confidence 33399997768777666553221 110 01111122465555532 255778765422111 0 12
Q ss_pred HHHHHHHHHHh--hcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCC
Q 001736 550 QFKFFAELVKE--QVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (1019)
Q Consensus 550 Q~~wFe~ll~~--~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhY 614 (1019)
..+.+.+.+.+ +.+..|-||+++|-+.-. -..+.+++ ..++++|+||.|..
T Consensus 167 ~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~------------~~~la~~~--~~iDlilgGH~H~~ 219 (264)
T cd07411 167 REEELQEVVVKLRREEGVDVVVLLSHNGLPV------------DVELAERV--PGIDVILSGHTHER 219 (264)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecCCchh------------hHHHHhcC--CCCcEEEeCccccc
Confidence 23344444221 124569999999987520 01233333 57999999999964
No 54
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=96.76 E-value=0.0048 Score=66.80 Aligned_cols=18 Identities=33% Similarity=0.434 Sum_probs=14.2
Q ss_pred CcEEEeCCCCCCCCChhH
Q 001736 485 PQCYIIPGNHDWFDGLNT 502 (1019)
Q Consensus 485 P~vfAIPGNHDWyDGL~a 502 (1019)
.++++|+||||..+.+..
T Consensus 76 i~v~~i~GNHD~~~~~~~ 93 (253)
T TIGR00619 76 IPIVVISGNHDSAQRLSA 93 (253)
T ss_pred ceEEEEccCCCChhhccc
Confidence 349999999998776543
No 55
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=96.55 E-value=0.018 Score=66.82 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=26.7
Q ss_pred CeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 566 DSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 566 d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
..-|++.|....... .+. ..-+++++...++++.||+|..+
T Consensus 201 ~fnIlv~Hq~~~~~~-----~~~----~ipe~llp~~fDYValGHiH~~~ 241 (405)
T TIGR00583 201 WFNLLVLHQNHAAHT-----STS----FLPESFIPDFFDLVIWGHEHECL 241 (405)
T ss_pred ceEEEEeCceecCCC-----Ccc----cCchhhhhccCcEEEeccccccc
Confidence 457999999863221 111 12244556679999999999754
No 56
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=96.55 E-value=0.0028 Score=65.12 Aligned_cols=30 Identities=17% Similarity=0.078 Sum_probs=21.2
Q ss_pred CCceeEEEcCccCCCcceeecCCCCCcccceEEEecC
Q 001736 600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGC 636 (1019)
Q Consensus 600 ~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGG 636 (1019)
..+++++++||+|.-...... ...++++|+
T Consensus 187 ~~~~~~~i~GH~H~~~~~~~~-------~~~~~n~G~ 216 (217)
T cd07398 187 RKGVDGVICGHTHRPALHELD-------GKLYINLGD 216 (217)
T ss_pred hcCCCEEEECCCCCCCeEEEC-------CEEEEECCC
Confidence 578999999999976555422 225677764
No 57
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.43 E-value=0.0094 Score=67.74 Aligned_cols=52 Identities=27% Similarity=0.433 Sum_probs=33.0
Q ss_pred CccEEEEcccccCcCCChhhhh-hccccchhhhcCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCCh
Q 001736 422 RGDVLLIGGDLAYPNPSAFTYE-RRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL 500 (1019)
Q Consensus 422 RgdfLVlgGDlvYP~gs~e~Y~-~Rfv~PYe~Al~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL 500 (1019)
+.|+||++|| +|..+....+. .++.+=++. +++ .+.++|+|+||||.-+++
T Consensus 40 ~vD~vliAGD-lFd~~~Ps~~a~~~~~~~l~~--------------------------l~~-~~Ipv~~I~GNHD~~~~~ 91 (390)
T COG0420 40 KVDFVLIAGD-LFDTNNPSPRALKLFLEALRR--------------------------LKD-AGIPVVVIAGNHDSPSRL 91 (390)
T ss_pred cCCEEEEccc-cccCCCCCHHHHHHHHHHHHH--------------------------hcc-CCCcEEEecCCCCchhcc
Confidence 3499999999 57776554443 233222221 222 345699999999987664
Q ss_pred h
Q 001736 501 N 501 (1019)
Q Consensus 501 ~ 501 (1019)
.
T Consensus 92 ~ 92 (390)
T COG0420 92 S 92 (390)
T ss_pred c
Confidence 4
No 58
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=96.39 E-value=0.11 Score=55.97 Aligned_cols=123 Identities=20% Similarity=0.213 Sum_probs=62.3
Q ss_pred CCcEEEeCCCCCCCCChhHHHHHhhccc--cCC-ccc-----cCCCcceEEEECCCc--EEEEEEecCCC------CC--
Q 001736 484 GPQCYIIPGNHDWFDGLNTFMRFICHKS--WLG-GWF-----MPQKKSYFALQLPKG--WWVFGLDLALH------CD-- 545 (1019)
Q Consensus 484 gP~vfAIPGNHDWyDGL~aF~R~F~~r~--~lg-GW~-----mpQ~~SYFAlrLp~~--wWLlGLDsql~------gd-- 545 (1019)
+..+. .+||||+.-|++.+.+..-+-. +++ ... .+.-.+|-.++...| .=++|+-+... ..
T Consensus 70 g~d~~-~~GNHefd~G~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~ 148 (257)
T cd07408 70 GYDAV-TPGNHEFDYGLDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVK 148 (257)
T ss_pred CCcEE-ccccccccCCHHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccC
Confidence 45454 5799998778887776553221 111 110 111124655566524 34566654211 11
Q ss_pred -C---CH--HHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcce
Q 001736 546 -I---DV--YQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (1019)
Q Consensus 546 -I---D~--~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~ 617 (1019)
+ |. .-.++..+.++ .+.-|-||+++|.+...... ..+..++.++ -..++++|+||.|....-
T Consensus 149 ~~~~~d~~~~~~~~~v~~l~--~~~~D~iIvl~H~G~~~~~~------~~~~~~la~~--~~giDvIigGH~H~~~~~ 216 (257)
T cd07408 149 DVTFEDPIEEAKKVIVAALK--AKGADVIVALGHLGVDRTSS------PWTSTELAAN--VTGIDLIIDGHSHTTIEI 216 (257)
T ss_pred CcEEecHHHHHHHHHHHHHH--hCCCCEEEEEeCcCcCCCCC------CccHHHHHHh--CCCceEEEeCCCcccccC
Confidence 1 21 11122111121 23468999999988754321 1112233333 247999999999976543
No 59
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=96.34 E-value=0.025 Score=67.80 Aligned_cols=98 Identities=16% Similarity=0.216 Sum_probs=64.9
Q ss_pred cCCCcceEEEECCCcEEEEEEecCCCC---------CCC-HHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcc
Q 001736 518 MPQKKSYFALQLPKGWWVFGLDLALHC---------DID-VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVS 587 (1019)
Q Consensus 518 mpQ~~SYFAlrLp~~wWLlGLDsql~g---------dID-~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~ 587 (1019)
+-+++.||+.....|-.++.|++.-.. ..| .+|++||..+++++-..++.|=+++|=|.=....... -
T Consensus 301 t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~GekVhil~HIPpG~~~c~~~-w- 378 (577)
T KOG3770|consen 301 TFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESAGEKVHILGHIPPGDGVCLEG-W- 378 (577)
T ss_pred hhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhcCCEEEEEEeeCCCCcchhhh-h-
Confidence 345667999999999999999986321 123 5789999999986667789999999999854221100 0
Q ss_pred hhhhHHHHHhhhCCceeEEEcCccC-CCccee
Q 001736 588 GKNVKHLICDYLKGRCKLRIAGDMH-HYMRHS 618 (1019)
Q Consensus 588 ~~~l~~Lle~~L~~RV~LvLAGHiH-hYsR~~ 618 (1019)
..+--..+.++ ..-+.-.+-||.| ...|..
T Consensus 379 s~~f~~iv~r~-~~tI~gqf~GH~h~d~f~v~ 409 (577)
T KOG3770|consen 379 SINFYRIVNRF-RSTIAGQFYGHTHIDEFRVF 409 (577)
T ss_pred hHHHHHHHHHH-HHhhhhhccccCcceeEEEE
Confidence 11222222332 3446678999999 444443
No 60
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.31 E-value=0.014 Score=63.40 Aligned_cols=30 Identities=20% Similarity=0.196 Sum_probs=21.3
Q ss_pred CCceeEEEcCccCCCcceeecCCCCCcccceEEEecC
Q 001736 600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGC 636 (1019)
Q Consensus 600 ~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGG 636 (1019)
++.|+.+++||+|+-+-+. .+ +..+||.|.
T Consensus 185 ~~~vd~vI~GH~Hr~ai~~-i~------~~~yi~lGd 214 (237)
T COG2908 185 RHGVDGVIHGHTHRPAIHN-IP------GITYINLGD 214 (237)
T ss_pred HcCCCEEEecCcccHhhcc-CC------CceEEecCc
Confidence 6799999999999744332 11 236888775
No 61
>PHA02546 47 endonuclease subunit; Provisional
Probab=96.23 E-value=0.042 Score=61.99 Aligned_cols=14 Identities=36% Similarity=0.705 Sum_probs=11.7
Q ss_pred CCcEEEeCCCCCCC
Q 001736 484 GPQCYIIPGNHDWF 497 (1019)
Q Consensus 484 gP~vfAIPGNHDWy 497 (1019)
+.++++||||||.+
T Consensus 76 gi~v~~I~GNHD~~ 89 (340)
T PHA02546 76 GITLHVLVGNHDMY 89 (340)
T ss_pred CCeEEEEccCCCcc
Confidence 34599999999975
No 62
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=96.16 E-value=0.006 Score=70.61 Aligned_cols=23 Identities=30% Similarity=0.398 Sum_probs=17.7
Q ss_pred CcEEEeCCCCCCCCChhHHHHHh
Q 001736 485 PQCYIIPGNHDWFDGLNTFMRFI 507 (1019)
Q Consensus 485 P~vfAIPGNHDWyDGL~aF~R~F 507 (1019)
.++++|+||||.+..+....+.+
T Consensus 75 ~~v~~I~GNHD~~~~l~~~~~~l 97 (407)
T PRK10966 75 CQLVVLAGNHDSVATLNESRDLL 97 (407)
T ss_pred CcEEEEcCCCCChhhhhhHHHHH
Confidence 34999999999988876555544
No 63
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=96.01 E-value=0.17 Score=55.56 Aligned_cols=117 Identities=14% Similarity=0.176 Sum_probs=60.7
Q ss_pred CCcEEEeCCCCCCCCChhHHHHHhhccc--cCC-ccc--------cCCCcceEEEECCC-cEEEEEEecCCCCC------
Q 001736 484 GPQCYIIPGNHDWFDGLNTFMRFICHKS--WLG-GWF--------MPQKKSYFALQLPK-GWWVFGLDLALHCD------ 545 (1019)
Q Consensus 484 gP~vfAIPGNHDWyDGL~aF~R~F~~r~--~lg-GW~--------mpQ~~SYFAlrLp~-~wWLlGLDsql~gd------ 545 (1019)
+..+. .+||||+--|.+.+.+.+-+-. +++ +.. .+.-..|-.++... ..-++|+-+.....
T Consensus 82 g~D~~-~lGNHefd~G~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~ 160 (281)
T cd07409 82 GYDAM-TLGNHEFDDGVEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGG 160 (281)
T ss_pred CCCEE-EeccccccCCHHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCC
Confidence 35455 4699999888887776554321 111 111 11112464454422 25677776543211
Q ss_pred -CC-HHHHHHHHHHHHh-hcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 546 -ID-VYQFKFFAELVKE-QVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 546 -ID-~~Q~~wFe~ll~~-~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
+. ....+-.++.+++ +.+.-|-||+++|-..- . ...+.+++ ..++++++||.|...
T Consensus 161 ~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~---------~---d~~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 161 KVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYE---------V---DKEIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred ceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCch---------h---HHHHHHcC--CCCcEEEeCCcCccc
Confidence 11 0112234443321 11235889999998641 0 11333443 469999999999754
No 64
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=95.89 E-value=0.043 Score=56.62 Aligned_cols=16 Identities=19% Similarity=0.399 Sum_probs=13.0
Q ss_pred CCceeEEEcCccCCCc
Q 001736 600 KGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 600 ~~RV~LvLAGHiHhYs 615 (1019)
+..++++++||+|.-.
T Consensus 104 ~~~~dvii~GHTH~p~ 119 (178)
T cd07394 104 QLDVDILISGHTHKFE 119 (178)
T ss_pred hcCCCEEEECCCCcce
Confidence 4578999999999643
No 65
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=95.74 E-value=0.1 Score=55.78 Aligned_cols=18 Identities=17% Similarity=0.115 Sum_probs=14.1
Q ss_pred CceeEEEcCccCCCccee
Q 001736 601 GRCKLRIAGDMHHYMRHS 618 (1019)
Q Consensus 601 ~RV~LvLAGHiHhYsR~~ 618 (1019)
...+++++||.|.+....
T Consensus 190 ~~p~vii~Gh~h~~~~~~ 207 (243)
T cd07386 190 EVPDILHTGHVHVYGVGV 207 (243)
T ss_pred CCCCEEEECCCCchHhEE
Confidence 467899999999865553
No 66
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=95.14 E-value=0.7 Score=50.93 Aligned_cols=117 Identities=21% Similarity=0.271 Sum_probs=59.1
Q ss_pred CCCcEEEeCCCCCCCCC-hhHHHHHhhccccCCccc--cCCCcceEEEECCCcEE--EEEEecCC-CCCCCHHHHHHHHH
Q 001736 483 DGPQCYIIPGNHDWFDG-LNTFMRFICHKSWLGGWF--MPQKKSYFALQLPKGWW--VFGLDLAL-HCDIDVYQFKFFAE 556 (1019)
Q Consensus 483 ~gP~vfAIPGNHDWyDG-L~aF~R~F~~r~~lgGW~--mpQ~~SYFAlrLp~~wW--LlGLDsql-~gdID~~Q~~wFe~ 556 (1019)
-+..++.+ |||+|=.| +..++......-...... .|. +.|..++.. |.- ++++-... ...++.+ ++-.++
T Consensus 57 ~G~D~iTl-GNH~fD~gel~~~l~~~~~~l~~aN~~~~~pg-~~~~i~~~~-G~kIaVigl~g~~~~~~~~~P-~~~~~~ 132 (255)
T cd07382 57 AGVDVITM-GNHTWDKKEILDFIDEEPRLLRPANYPPGTPG-RGYGVVEVN-GKKIAVINLMGRVFMPPLDNP-FRAADE 132 (255)
T ss_pred cCCCEEEe-cccccCcchHHHHHhcCcCceEeeecCCCCCC-CCeEEEEEC-CEEEEEEEEecccCCCcCCCH-HHHHHH
Confidence 34556666 99999666 334443221100011111 222 246666665 444 44443111 1123333 334555
Q ss_pred HHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 557 LVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 557 ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
++++.....|-||+.+|--. +.+.. .+..++.++|++++.||+|.-.
T Consensus 133 ~v~~lk~~~D~IIV~~H~g~----------tsEk~--ala~~ldg~VdvIvGtHTHv~t 179 (255)
T cd07382 133 LLEELKEEADIIFVDFHAEA----------TSEKI--ALGWYLDGRVSAVVGTHTHVQT 179 (255)
T ss_pred HHHHHhcCCCEEEEEECCCC----------CHHHH--HHHHhCCCCceEEEeCCCCccC
Confidence 55421224578999999732 11111 1234557899999999999643
No 67
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=94.43 E-value=0.7 Score=60.35 Aligned_cols=188 Identities=14% Similarity=0.099 Sum_probs=93.1
Q ss_pred CCeEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEE-cccccCcCCChhhhhhccccchhhhcCCCC
Q 001736 380 EDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLI-GGDLAYPNPSAFTYERRLFRPFEYALQPPP 458 (1019)
Q Consensus 380 ~~~wFd~VADtGDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVl-gGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~ 458 (1019)
.++.+-.+.|+=........++.++.+... ..+++|++ +||.. .|+...-..+- +|.-.+|.
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~-----------~~~~~l~ld~GD~~--~gs~~~~~~~g-~~~~~~ln--- 721 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKE-----------ENPNTILVDAGDVY--QGSLYSNLLKG-LPVLKMMK--- 721 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHh-----------hCCCeEEEecCCCC--CCcchhhhcCC-hHHHHHHh---
Confidence 459999999995322334456666654321 12355655 99955 44431111111 22222221
Q ss_pred CCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCCCChhHHHHHhhccc--------------cCCc---c-ccCC
Q 001736 459 WYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKS--------------WLGG---W-FMPQ 520 (1019)
Q Consensus 459 ~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~--------------~lgG---W-~mpQ 520 (1019)
. -+. -++++||||+.-|.+.+.+..-+-. +++. + ...+
T Consensus 722 ----------------------~-lg~-d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~ 777 (1163)
T PRK09419 722 ----------------------E-MGY-DASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGK 777 (1163)
T ss_pred ----------------------C-cCC-CEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCc
Confidence 1 123 3559999999988887777664311 1111 1 1111
Q ss_pred C----cceEEEECCCc--EEEEEEecCC------CC---CCC-HHHHHHHHHHHHh--hcCCCCeEEEEecCCCcccccc
Q 001736 521 K----KSYFALQLPKG--WWVFGLDLAL------HC---DID-VYQFKFFAELVKE--QVGERDSVIIMTHEPNWLLDWY 582 (1019)
Q Consensus 521 ~----~SYFAlrLp~~--wWLlGLDsql------~g---dID-~~Q~~wFe~ll~~--~v~~~d~VIL~tHeP~w~~d~~ 582 (1019)
. ..|..++.. | .=++|+-+.. .. .+. ....+-.++.+++ +.+.-|-||+++|...-....
T Consensus 778 ~~~~~~py~I~e~~-G~kIgiiGltt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~- 855 (1163)
T PRK09419 778 LVSWAKPYILVEVN-GKKVGFIGLTTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRT- 855 (1163)
T ss_pred cccccCCEEEEEEC-CEEEEEEEecccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCcccccc-
Confidence 1 246555543 3 3356664321 01 110 0112223333321 013458999999998643211
Q ss_pred ccCcchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 583 FNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 583 ~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
........+.+++ ..++++|+||.|...
T Consensus 856 ---~~~~~~~~lA~~v--~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 856 ---TGEITGLELAKKV--KGVDAIISAHTHTLV 883 (1163)
T ss_pred ---ccccHHHHHHHhC--CCCCEEEeCCCCccc
Confidence 0111123344443 359999999999754
No 68
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=93.97 E-value=0.029 Score=59.19 Aligned_cols=49 Identities=20% Similarity=0.252 Sum_probs=29.8
Q ss_pred CCccEEEEcccccCcCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCC
Q 001736 421 PRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDW 496 (1019)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDW 496 (1019)
++.|.++++||++=-++...+--+.+.+..+.+. + .+-.++.|+||||.
T Consensus 31 ~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~--------------------------~-~~~~v~~l~GNHE~ 79 (208)
T cd07425 31 GGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAA--------------------------K-AGGKVHFLLGNHEL 79 (208)
T ss_pred CCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHH--------------------------h-cCCeEEEeeCCCcH
Confidence 4568999999977555544444444433332221 1 12339999999995
No 69
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=93.89 E-value=0.95 Score=50.35 Aligned_cols=84 Identities=15% Similarity=0.215 Sum_probs=45.7
Q ss_pred ceEEEECCCcEE--EEEEecCCC---CCC---C---HHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhh
Q 001736 523 SYFALQLPKGWW--VFGLDLALH---CDI---D---VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNV 591 (1019)
Q Consensus 523 SYFAlrLp~~wW--LlGLDsql~---gdI---D---~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l 591 (1019)
+|..++..+|.. ++|+=+... ..+ | ..|.+|+.+++++ +.-|-||+++|-..-... +... .
T Consensus 137 ~y~i~~~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~--~~~DvIIvlsH~G~~~d~-----~~~~-~ 208 (282)
T cd07407 137 RYRKFTTKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN--EDVDLILVLGHMPVRDDA-----EFKV-L 208 (282)
T ss_pred ceEEEEcCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh--cCCCEEEEEeCCCCCCCc-----cHHH-H
Confidence 576777754544 667643321 111 2 2344577776652 346899999998875331 1111 1
Q ss_pred HHHHHhhhCCceeEEEcCccCCC
Q 001736 592 KHLICDYLKGRCKLRIAGDMHHY 614 (1019)
Q Consensus 592 ~~Lle~~L~~RV~LvLAGHiHhY 614 (1019)
...+.+.++...++.|+||.|..
T Consensus 209 ~~~la~~~~~id~~Ii~GHsH~~ 231 (282)
T cd07407 209 HDAIRKIFPDTPIQFLGGHSHVR 231 (282)
T ss_pred HHHHHHhCCCCCEEEEeCCcccc
Confidence 12223323443448999999974
No 70
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=93.55 E-value=0.074 Score=53.91 Aligned_cols=37 Identities=14% Similarity=0.149 Sum_probs=24.6
Q ss_pred CCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCccee
Q 001736 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHS 618 (1019)
Q Consensus 564 ~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~ 618 (1019)
-+...|+++|.|..... . ..+.+++++||+|..+.-.
T Consensus 105 ~~~~~i~l~H~~~~~~~----------~--------~~~~d~vi~GHtH~~~~~~ 141 (168)
T cd07390 105 IGGRRVYLSHYPILEWN----------G--------LDRGSWNLHGHIHSNSPDI 141 (168)
T ss_pred ECCEEEEEEeCCcccCC----------C--------CCCCeEEEEeeeCCCCCCC
Confidence 35788999997643211 0 2367899999999755443
No 71
>PRK04036 DNA polymerase II small subunit; Validated
Probab=93.13 E-value=0.09 Score=62.70 Aligned_cols=53 Identities=19% Similarity=0.313 Sum_probs=28.3
Q ss_pred CCCeEEEEEeccCCCCCCch--HHHHHhcCcccccccCCCccccCCccEEEEccccc
Q 001736 379 KEDLWFDFMADTGDGGNSSY--SVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLA 433 (1019)
Q Consensus 379 d~~~wFd~VADtGDG~nStY--tVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlv 433 (1019)
+++.++.+++|+.-|.+... ....++. .++-..+++.....+.+.+|++||++
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~--~L~g~~~~~~~~~~~~d~lVIaGDiv 295 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFID--WLNGEVGNEEEIASRVKYLIIAGDLV 295 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHH--HHhCCCccchhhhhcCCEEEEeCccc
Confidence 56789999999975543221 1222211 11100000011134668999999988
No 72
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=92.95 E-value=4 Score=45.25 Aligned_cols=53 Identities=11% Similarity=0.145 Sum_probs=30.3
Q ss_pred CCCeEEEEecCCCccccccccCcc-hhhhHHHHHhhhCCceeEEEcCccCCCcce
Q 001736 564 ERDSVIIMTHEPNWLLDWYFNNVS-GKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (1019)
Q Consensus 564 ~~d~VIL~tHeP~w~~d~~~~~~~-~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~ 617 (1019)
.-|-||+++|-..-........+. ......++.+. ..+++++|+||.|.....
T Consensus 191 ~~D~IIvL~H~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~iD~IlgGHsH~~~~~ 244 (288)
T cd07412 191 GVDAIVVLAHEGGSTKGGDDTCSAASGPIADIVNRL-DPDVDVVFAGHTHQAYNC 244 (288)
T ss_pred CCCEEEEEeCCCCCCCCCCccccccChhHHHHHhhc-CCCCCEEEeCccCccccc
Confidence 468999999987653322110000 00122233322 357999999999976643
No 73
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=92.85 E-value=2.5 Score=46.83 Aligned_cols=51 Identities=18% Similarity=0.082 Sum_probs=30.1
Q ss_pred CCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcc
Q 001736 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (1019)
Q Consensus 564 ~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR 616 (1019)
.-|-||+++|-........... . .....+.+++....++++|+||.|....
T Consensus 173 ~~D~VI~lsH~G~~~~~~~~~~-~-~~~~~lA~~~~~~giD~IigGHsH~~~~ 223 (285)
T cd07405 173 KPDIVIAATHMGHYDNGEHGSN-A-PGDVEMARALPAGGLDLIVGGHSQDPVC 223 (285)
T ss_pred CCCEEEEEecccccCCcccccc-C-chHHHHHHhcCCCCCCEEEeCCCCcccc
Confidence 4589999999887533211110 0 1111333333235799999999997653
No 74
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=92.70 E-value=0.094 Score=53.26 Aligned_cols=15 Identities=33% Similarity=0.324 Sum_probs=12.2
Q ss_pred CccEEEEcccccCcC
Q 001736 422 RGDVLLIGGDLAYPN 436 (1019)
Q Consensus 422 RgdfLVlgGDlvYP~ 436 (1019)
++|.||++||+....
T Consensus 41 ~~d~lii~GDl~~~~ 55 (172)
T cd07391 41 GPERLIILGDLKHSF 55 (172)
T ss_pred CCCEEEEeCcccccc
Confidence 468999999999643
No 75
>PRK09453 phosphodiesterase; Provisional
Probab=92.43 E-value=0.18 Score=51.51 Aligned_cols=39 Identities=23% Similarity=0.195 Sum_probs=22.8
Q ss_pred EEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCc
Q 001736 383 WFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYP 435 (1019)
Q Consensus 383 wFd~VADtGDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP 435 (1019)
.+.+++|+=.. ..+..++++.-. ..++|.++++||++.-
T Consensus 2 ri~viSD~Hg~---~~~~~~~l~~~~-----------~~~~d~ii~lGDi~~~ 40 (182)
T PRK09453 2 KLMFASDTHGS---LPATEKALELFA-----------QSGADWLVHLGDVLYH 40 (182)
T ss_pred eEEEEEeccCC---HHHHHHHHHHHH-----------hcCCCEEEEccccccc
Confidence 46789999522 223333333210 1245899999998753
No 76
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=90.68 E-value=0.82 Score=46.68 Aligned_cols=49 Identities=16% Similarity=0.081 Sum_probs=32.2
Q ss_pred CeEEEEecCCCcccccccc--------CcchhhhHHHHHhhhCCceeEEEcCccC-CCcce
Q 001736 566 DSVIIMTHEPNWLLDWYFN--------NVSGKNVKHLICDYLKGRCKLRIAGDMH-HYMRH 617 (1019)
Q Consensus 566 d~VIL~tHeP~w~~d~~~~--------~~~~~~l~~Lle~~L~~RV~LvLAGHiH-hYsR~ 617 (1019)
+.-||+||+|+..-....+ ....+.+++++++. |.+..+|||.| .|+|-
T Consensus 69 ~~DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~l---kPrYhf~gh~~~fyer~ 126 (150)
T cd07380 69 GVDILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKL---KPRYHFAGLEGVFYERE 126 (150)
T ss_pred CCCEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHc---CCCeEeecCCCceEeec
Confidence 5568999999976422111 11233466666655 88999999999 77763
No 77
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=90.64 E-value=0.81 Score=47.75 Aligned_cols=44 Identities=27% Similarity=0.406 Sum_probs=29.7
Q ss_pred cCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCC
Q 001736 562 VGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (1019)
Q Consensus 562 v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHh 613 (1019)
+.-++..|++.|-|.=..+ + .+.+.+ +.+++.++.+.|-||.|.
T Consensus 104 ie~dg~~~~LsHyP~~~~~--~---~~~~~r---~~y~~~~~~llIHGH~H~ 147 (186)
T COG4186 104 IEWDGEDVYLSHYPRPGQD--H---PGMESR---FDYLRLRVPLLIHGHLHS 147 (186)
T ss_pred eeECCeEEEEEeCCCCCCC--C---cchhhh---HHHHhccCCeEEeccccc
Confidence 3346888999999874333 1 122222 344578999999999998
No 78
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=90.60 E-value=4 Score=49.28 Aligned_cols=50 Identities=12% Similarity=0.080 Sum_probs=29.6
Q ss_pred CCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 564 ~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
.-|-||+++|.-........ +....-..+.+++=...|+++|+||.|.+-
T Consensus 209 ~~D~IV~LsH~G~~~~~~~~--~~~~~d~~la~~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 209 KPDVIIALTHMGHYDDGEHG--SNAPGDVEMARSLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred CCCEEEEEeccccccCCccC--CCCccHHHHHHhCCccCceEEEeCCCCccc
Confidence 45899999998875332111 010111234444312479999999999754
No 79
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=90.07 E-value=8 Score=46.28 Aligned_cols=119 Identities=19% Similarity=0.156 Sum_probs=64.0
Q ss_pred EeCCCCCCCCChhHHHHHhhccc--cC-Ccc------ccCCCcceEEEECCCc-EEEEEEecCCC---------CCCC-H
Q 001736 489 IIPGNHDWFDGLNTFMRFICHKS--WL-GGW------FMPQKKSYFALQLPKG-WWVFGLDLALH---------CDID-V 548 (1019)
Q Consensus 489 AIPGNHDWyDGL~aF~R~F~~r~--~l-gGW------~mpQ~~SYFAlrLp~~-wWLlGLDsql~---------gdID-~ 548 (1019)
+..|||+..-|++.+.++.-+-. ++ +.. ..+.-.+|.-++.+.- .=++|+.+... .++. .
T Consensus 107 ~tiGNHEFd~g~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~~~~~~~~~~~f~ 186 (517)
T COG0737 107 MTLGNHEFDYGLEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTWEKPNAIEGVTFR 186 (517)
T ss_pred EeecccccccCHHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccccccccccCCcEEc
Confidence 36799999999988888664432 11 111 1122235767777542 44677765211 1221 1
Q ss_pred HHHHHHHHHHHhhcCC--CCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCC
Q 001736 549 YQFKFFAELVKEQVGE--RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (1019)
Q Consensus 549 ~Q~~wFe~ll~~~v~~--~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhY 614 (1019)
...+..++.+.+ +.. -|-||+++|-+.-..........+. + ...+ ..+++.++||.|++
T Consensus 187 d~~e~~~~~i~e-lk~~~vD~iI~LsH~G~~~d~~~~~~~~~~-~-~~~~----~~iD~i~~GH~H~~ 247 (517)
T COG0737 187 DPIEAAKKYIPE-LKGEGVDVIIALSHLGIEDDLELASEVPGD-V-DVAV----PGIDLIIGGHSHTV 247 (517)
T ss_pred CHHHHHHHHHHH-HHhcCCCEEEEEeccCcCcccccccccccc-c-cccc----cCcceEeccCCccc
Confidence 223344443332 222 5899999999986543221111000 0 0001 23999999999976
No 80
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=89.05 E-value=1.9 Score=45.01 Aligned_cols=43 Identities=16% Similarity=0.122 Sum_probs=26.6
Q ss_pred CCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCC
Q 001736 563 GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (1019)
Q Consensus 563 ~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHh 613 (1019)
.-++..|.++|-=.+.... ....++.+-+ ...+++++.||+|-
T Consensus 78 ~~~g~ki~l~HGh~~~~~~-----~~~~l~~la~---~~~~Dvli~GHTH~ 120 (172)
T COG0622 78 EVGGVKIFLTHGHLYFVKT-----DLSLLEYLAK---ELGADVLIFGHTHK 120 (172)
T ss_pred EECCEEEEEECCCcccccc-----CHHHHHHHHH---hcCCCEEEECCCCc
Confidence 4468899999974443110 1122333333 34799999999995
No 81
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=88.02 E-value=4.4 Score=49.10 Aligned_cols=112 Identities=17% Similarity=0.170 Sum_probs=56.6
Q ss_pred EEEeCCCCCCCCChhHHHHHhhccc--cCC-cc--c-----cCCCcceEEEECCC-cEEEEEEecCCC--------CCC-
Q 001736 487 CYIIPGNHDWFDGLNTFMRFICHKS--WLG-GW--F-----MPQKKSYFALQLPK-GWWVFGLDLALH--------CDI- 546 (1019)
Q Consensus 487 vfAIPGNHDWyDGL~aF~R~F~~r~--~lg-GW--~-----mpQ~~SYFAlrLp~-~wWLlGLDsql~--------gdI- 546 (1019)
=.+.+||||+=-|.+.+.+..-+-. ++. .. . .+.-..|-.++... ..=++|+.+... .++
T Consensus 84 Da~~lGNHEFd~G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~ 163 (550)
T TIGR01530 84 DFFTLGNHEFDAGNEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIK 163 (550)
T ss_pred CEEEeccccccCCHHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceE
Confidence 4568999997557666655443221 111 11 0 01223565555422 266888864211 011
Q ss_pred --CHH--HHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 547 --DVY--QFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 547 --D~~--Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
|.. -.++.++ +++ +.-|-||+++|--.- .+ ..+.+++ ..++++|+||.|.+-
T Consensus 164 f~d~~~~~~~~v~~-Lk~--~g~D~II~lsH~g~~----------~d--~~la~~~--~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 164 FIDEIAAAQIAANA-LKQ--QGINKIILLSHAGFE----------KN--CEIAQKI--NDIDVIVSGDSHYLL 219 (550)
T ss_pred ECCHHHHHHHHHHH-HHh--CCCCEEEEEecCCcH----------HH--HHHHhcC--CCCCEEEeCCCCccc
Confidence 211 1122222 221 234889999997531 00 1233332 369999999999854
No 82
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=87.18 E-value=7.2 Score=48.17 Aligned_cols=46 Identities=13% Similarity=0.114 Sum_probs=28.1
Q ss_pred CCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 565 ~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
-|-||+++|...-.. .+ .+...|....++++ ..|+++++||.|..-
T Consensus 196 aDvII~LsH~G~~~d-~~--~~~~en~~~~l~~v--~gID~Il~GHsH~~~ 241 (626)
T TIGR01390 196 ADIIVALAHSGISAD-PY--QPGAENSAYYLTKV--PGIDAVLFGHSHAVF 241 (626)
T ss_pred CCEEEEEeccCcCCC-cc--ccccchHHHHHhcC--CCCCEEEcCCCCccC
Confidence 488999999876432 11 11223333333433 469999999999753
No 83
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=86.09 E-value=1 Score=47.24 Aligned_cols=43 Identities=21% Similarity=0.154 Sum_probs=25.0
Q ss_pred EEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCCh
Q 001736 384 FDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (1019)
Q Consensus 384 Fd~VADtGDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~ 439 (1019)
+.+++|+=.- ..+...+++.-.. .++.|.++++||++.-++..
T Consensus 3 i~~isDiHg~---~~~l~~~l~~~~~----------~~~~d~~~~~GD~v~~g~~~ 45 (207)
T cd07424 3 DFVVGDIHGH---YSLLQKALDAVGF----------DPARDRLISVGDLIDRGPES 45 (207)
T ss_pred EEEEECCCCC---HHHHHHHHHHcCC----------CCCCCEEEEeCCcccCCCCH
Confidence 5678888321 2344444443210 13469999999988755443
No 84
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=86.02 E-value=7.9 Score=43.83 Aligned_cols=38 Identities=16% Similarity=0.304 Sum_probs=25.6
Q ss_pred CCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 565 ~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
-|-||+++|--.+..+ ..+.+++ ..++++|.||.|.+.
T Consensus 208 vD~II~LsH~g~~~~d-----------~~lA~~v--~gIDvIigGHsH~~l 245 (313)
T cd08162 208 INKIILLSHLQQISIE-----------QALAALL--SGVDVIIAGGSNTLL 245 (313)
T ss_pred CCEEEEEecccccchH-----------HHHHhcC--CCCCEEEeCCCCccC
Confidence 5889999998543211 1233333 369999999999864
No 85
>PHA02239 putative protein phosphatase
Probab=85.17 E-value=1 Score=49.00 Aligned_cols=45 Identities=9% Similarity=0.097 Sum_probs=24.6
Q ss_pred EEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCCh
Q 001736 383 WFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (1019)
Q Consensus 383 wFd~VADtGDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~ 439 (1019)
.+.+|+|.= |. .....+++.+-..+ ....|.|+++||++--++..
T Consensus 2 ~~~~IsDIH-G~--~~~l~~ll~~i~~~---------~~~~d~li~lGD~iDrG~~s 46 (235)
T PHA02239 2 AIYVVPDIH-GE--YQKLLTIMDKINNE---------RKPEETIVFLGDYVDRGKRS 46 (235)
T ss_pred eEEEEECCC-CC--HHHHHHHHHHHhhc---------CCCCCEEEEecCcCCCCCCh
Confidence 467889994 21 12344444432100 11248899999977655543
No 86
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=85.11 E-value=17 Score=38.99 Aligned_cols=133 Identities=9% Similarity=0.054 Sum_probs=65.0
Q ss_pred CCcEEEeCCCCCCCCChhHHHHHhh--ccc---cCCc-cccCCCcceEEEECCC-cEEEEEEecCCCCC-----------
Q 001736 484 GPQCYIIPGNHDWFDGLNTFMRFIC--HKS---WLGG-WFMPQKKSYFALQLPK-GWWVFGLDLALHCD----------- 545 (1019)
Q Consensus 484 gP~vfAIPGNHDWyDGL~aF~R~F~--~r~---~lgG-W~mpQ~~SYFAlrLp~-~wWLlGLDsql~gd----------- 545 (1019)
+..+..+.+||+.=-|.+++.+..- ++. +.|. -...+...|..++.+. ..=++|+-+.....
T Consensus 73 G~d~~~laNNH~fD~G~~gl~~t~~~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~~~~~~~~~~~~~g~~ 152 (239)
T smart00854 73 GFDVVSLANNHSLDYGEEGLLDTLAALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYGTNNGWAASKDRPGVA 152 (239)
T ss_pred CCCEEEeccCcccccchHHHHHHHHHHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcCCCCCcccCCCCCCee
Confidence 4557777779998667776666442 111 1221 1111112355555542 24456654322110
Q ss_pred -CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcceeecC
Q 001736 546 -IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVP 621 (1019)
Q Consensus 546 -ID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~~~~ 621 (1019)
++....+=..+.+++..+..|-||+++|--.-... .++ ...+++.+++....++++++||.|..+..+..+
T Consensus 153 ~~~~~~~~~i~~~i~~lr~~~D~vIv~~H~G~e~~~----~p~-~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e~~~ 224 (239)
T smart00854 153 LLPDLDREKILADIARARKKADVVIVSLHWGVEYQY----EPT-DEQRELAHALIDAGADVVIGHHPHVLQPIEIYK 224 (239)
T ss_pred ecCcCCHHHHHHHHHHHhccCCEEEEEecCccccCC----CCC-HHHHHHHHHHHHcCCCEEEcCCCCcCCceEEEC
Confidence 11000111222222111235889999986542111 111 122334444444579999999999988877543
No 87
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=84.64 E-value=1.6 Score=51.35 Aligned_cols=83 Identities=24% Similarity=0.283 Sum_probs=47.6
Q ss_pred CCCCCeEEEEEecc---CCC-----------CCCchHHHHH--hcCcccccccCCCccccCCccEEEEcccccCcC--CC
Q 001736 377 SEKEDLWFDFMADT---GDG-----------GNSSYSVARL--LAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPN--PS 438 (1019)
Q Consensus 377 ~~d~~~wFd~VADt---GDG-----------~nStYtVA~L--lAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~--gs 438 (1019)
++++.+....+||+ |+- +.+.+.+++. ++|. .-.||+++++||+.=-+ ..
T Consensus 44 ~~~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~------------~lkPdvvffLGDLfDeG~~~~ 111 (410)
T KOG3662|consen 44 SNENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQW------------RLKPDVVFFLGDLFDEGQWAG 111 (410)
T ss_pred CCCCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHh------------ccCCCEEEEeccccccCccCC
Confidence 34688999999999 632 2223333333 2232 23459999999954322 34
Q ss_pred hhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCCC
Q 001736 439 AFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWF 497 (1019)
Q Consensus 439 ~e~Y~~Rfv~PYe~Al~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWy 497 (1019)
.+++..+..+ +.-.+++ | ...++.-||||||+=
T Consensus 112 ~eEf~~~~~R-fkkIf~~------------k-------------~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 112 DEEFKKRYER-FKKIFGR------------K-------------GNIKVIYIAGNHDIG 144 (410)
T ss_pred hHHHHHHHHH-HHHhhCC------------C-------------CCCeeEEeCCccccc
Confidence 5666544422 3332221 1 124489999999973
No 88
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=84.44 E-value=12 Score=40.04 Aligned_cols=133 Identities=13% Similarity=0.054 Sum_probs=66.9
Q ss_pred CCCcEEEeCCCCCCCCChhHHHHHhh--cccc---CC-ccccCCCcceEEEECCCc-EEEEEEecCCCCCCC--------
Q 001736 483 DGPQCYIIPGNHDWFDGLNTFMRFIC--HKSW---LG-GWFMPQKKSYFALQLPKG-WWVFGLDLALHCDID-------- 547 (1019)
Q Consensus 483 ~gP~vfAIPGNHDWyDGL~aF~R~F~--~r~~---lg-GW~mpQ~~SYFAlrLp~~-wWLlGLDsql~gdID-------- 547 (1019)
-+..+..+.+||++=-|.+++.+..- ++.- .| |-...+...|..++.+.. .=++|+-+.......
T Consensus 76 ~G~d~~tlaNNH~fD~G~~gl~~t~~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~ 155 (239)
T cd07381 76 AGFDVVSLANNHTLDYGEEGLLDTLDALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGTNGIPLAAGARPGG 155 (239)
T ss_pred hCCCEEEcccccccccchHHHHHHHHHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCCCCCcCcccCCccc
Confidence 45667788889998667676665431 1111 11 111111123545555431 456666543322111
Q ss_pred --HHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcceeec
Q 001736 548 --VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYV 620 (1019)
Q Consensus 548 --~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR~~~~ 620 (1019)
..-.+-+.+.+++..+..|-||+.+|--. +.. ..+ ......+.+++....+++++.||.|..+..+.-
T Consensus 156 ~~~~~~~~~~~~i~~lr~~~D~vIv~~H~G~---e~~-~~p-~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~E~~ 225 (239)
T cd07381 156 VNPLDLERIAADIAEAKKKADIVIVSLHWGV---EYS-YYP-TPEQRELARALIDAGADLVIGHHPHVLQGIEIY 225 (239)
T ss_pred cCccCHHHHHHHHHHHhhcCCEEEEEecCcc---cCC-CCC-CHHHHHHHHHHHHCCCCEEEcCCCCcCCCeEEE
Confidence 00012233333221123688999999422 110 111 122233444444567999999999998887753
No 89
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=83.18 E-value=4.4 Score=48.53 Aligned_cols=47 Identities=19% Similarity=0.276 Sum_probs=32.7
Q ss_pred CCCeEEEEEecc-CCCCCC-chHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCCh
Q 001736 379 KEDLWFDFMADT-GDGGNS-SYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (1019)
Q Consensus 379 d~~~wFd~VADt-GDG~nS-tYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~ 439 (1019)
...+-|...||+ |+||.- -|+..+-|++.. +||+|+.||-+|-.|-.
T Consensus 137 ~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~--------------~D~viH~GDyIYeyg~~ 185 (522)
T COG3540 137 GRAIRFVWFADASCQGWEIGYMTAYKTMAKEE--------------PDFVIHLGDYIYEYGPI 185 (522)
T ss_pred CCcchhhhhhhccccccccchhHHHHHHHhcC--------------CCEEEEcCCeeeccCCc
Confidence 345667777777 566554 446667677642 49999999999987543
No 90
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=81.55 E-value=1.6 Score=47.10 Aligned_cols=16 Identities=31% Similarity=0.356 Sum_probs=12.7
Q ss_pred CccEEEEcccccCcCC
Q 001736 422 RGDVLLIGGDLAYPNP 437 (1019)
Q Consensus 422 RgdfLVlgGDlvYP~g 437 (1019)
++|.+++.||+.....
T Consensus 58 ~~d~vIi~GDl~h~~~ 73 (225)
T TIGR00024 58 GIEALIINGDLKHEFK 73 (225)
T ss_pred CCCEEEEcCccccccC
Confidence 4688999999986544
No 91
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=81.31 E-value=2 Score=44.65 Aligned_cols=17 Identities=29% Similarity=0.434 Sum_probs=12.7
Q ss_pred CccEEEEcccccCcCCC
Q 001736 422 RGDVLLIGGDLAYPNPS 438 (1019)
Q Consensus 422 RgdfLVlgGDlvYP~gs 438 (1019)
..|.+|++||++--++.
T Consensus 24 ~~d~li~lGD~vdrg~~ 40 (225)
T cd00144 24 PNDKLIFLGDYVDRGPD 40 (225)
T ss_pred CCCEEEEECCEeCCCCC
Confidence 45889999997765443
No 92
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=80.95 E-value=19 Score=45.83 Aligned_cols=47 Identities=15% Similarity=0.191 Sum_probs=28.3
Q ss_pred CCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcc
Q 001736 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (1019)
Q Consensus 565 ~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR 616 (1019)
-|-||+++|.-.-... .. ....+....++++ ..|+++|+||.|..-.
T Consensus 245 aDvIIaLsH~G~~~d~-~~--~~~ena~~~l~~v--~gID~IlgGHsH~~~~ 291 (780)
T PRK09418 245 ADVIVALAHSGVDKSG-YN--VGMENASYYLTEV--PGVDAVLMGHSHTEVK 291 (780)
T ss_pred CCEEEEEeccCccccc-cc--ccchhhhHHHhcC--CCCCEEEECCCCCccc
Confidence 4788999998764321 11 1122332223332 4699999999998653
No 93
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=80.67 E-value=18 Score=45.16 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=27.3
Q ss_pred CCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 565 ~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
-|-||+++|--.-. +.+. +...|....+.++ ..+++++.||.|..-
T Consensus 219 aDvII~LsH~G~~~-d~~~--~~aen~~~~l~~v--~gID~Il~GHsH~~~ 264 (649)
T PRK09420 219 ADIVVAIPHSGISA-DPYK--AMAENSVYYLSEV--PGIDAIMFGHSHAVF 264 (649)
T ss_pred CCEEEEEecCCcCC-CCcc--ccccchhHHHhcC--CCCCEEEeCCCCccC
Confidence 48888888886532 2111 1222332233332 469999999999753
No 94
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=77.60 E-value=93 Score=35.03 Aligned_cols=49 Identities=14% Similarity=0.144 Sum_probs=31.5
Q ss_pred HHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCC
Q 001736 553 FFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (1019)
Q Consensus 553 wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHh 613 (1019)
-.++++++...+.|-|||..|.-.= .....+..++.+||++++.-|+|=
T Consensus 132 ~~d~~i~~lk~~~d~IIVd~Haeat------------sEK~a~~~~ldg~vsaVvGtHtHV 180 (266)
T TIGR00282 132 VLKELINMLKKDCDLIFVDFHAETT------------SEKNAFGMAFDGYVTAVVGTHTHV 180 (266)
T ss_pred HHHHHHHhhhcCCCEEEEEeCCCCH------------HHHHHHHHHhCCCccEEEeCCCCC
Confidence 3445544222235789999996541 112234556689999999999994
No 95
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=75.26 E-value=3.6 Score=45.92 Aligned_cols=43 Identities=26% Similarity=0.305 Sum_probs=25.3
Q ss_pred EEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCCh
Q 001736 384 FDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (1019)
Q Consensus 384 Fd~VADtGDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~ 439 (1019)
..+|||+=.. -.+...++++-.. .+..|.++++||++--++..
T Consensus 3 ~~vIGDIHG~---~~~l~~ll~~~~~----------~~~~D~li~lGDlVdrGp~s 45 (275)
T PRK00166 3 TYAIGDIQGC---YDELQRLLEKIDF----------DPAKDTLWLVGDLVNRGPDS 45 (275)
T ss_pred EEEEEccCCC---HHHHHHHHHhcCC----------CCCCCEEEEeCCccCCCcCH
Confidence 5678888322 1234444443211 13458899999998876644
No 96
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=73.83 E-value=2.2 Score=50.87 Aligned_cols=88 Identities=24% Similarity=0.462 Sum_probs=49.5
Q ss_pred CCCCeEEEEEeccCCCCCCchH------HHHHhcCcccccccCCCccccCCccEEEEccccc-----CcCCChhhhhhcc
Q 001736 378 EKEDLWFDFMADTGDGGNSSYS------VARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLA-----YPNPSAFTYERRL 446 (1019)
Q Consensus 378 ~d~~~wFd~VADtGDG~nStYt------VA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlv-----YP~gs~e~Y~~Rf 446 (1019)
.++++...+++|.=-|.- ++. ..+.+.-+ ....+|-+.++++||+| ||+-..+-...--
T Consensus 222 ~~e~v~v~~isDih~GSk-~F~~~~f~~fi~wl~g~---------~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di 291 (481)
T COG1311 222 GDERVYVALISDIHRGSK-EFLEDEFEKFIDWLNGP---------GDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADI 291 (481)
T ss_pred CCcceEEEEEeeeecccH-HHHHHHHHHHHHHhcCC---------cccccceEEEEEecccccccccccCcccccccccc
Confidence 457778888888844411 111 11112111 11467778999999985 7875544333333
Q ss_pred ccchhhhcCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCC
Q 001736 447 FRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDW 496 (1019)
Q Consensus 447 v~PYe~Al~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDW 496 (1019)
+++|+.+-. .+ ++.| +-+.++++|||||-
T Consensus 292 ~~qy~~~A~--------~L----~~vp---------~~I~v~i~PGnhDa 320 (481)
T COG1311 292 YEQYEELAE--------FL----DQVP---------EHIKVFIMPGNHDA 320 (481)
T ss_pred hHHHHHHHH--------HH----hhCC---------CCceEEEecCCCCc
Confidence 455654321 11 1112 24679999999996
No 97
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=72.67 E-value=2.2 Score=46.89 Aligned_cols=47 Identities=34% Similarity=0.372 Sum_probs=30.8
Q ss_pred CccEEEEcccccCcCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCccccCCCCCcEEEeCCCCCC
Q 001736 422 RGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDW 496 (1019)
Q Consensus 422 RgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~i~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDW 496 (1019)
+++-||+.||+--..+-....+.++++-+..++ +...+..|+||||=
T Consensus 63 ~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~----------------------------~~~evi~i~GNHD~ 109 (235)
T COG1407 63 GPKRLIILGDLKHEFGKSLRQEKEEVREFLELL----------------------------DEREVIIIRGNHDN 109 (235)
T ss_pred CCCEEEEcCccccccCccccccHHHHHHHHHHh----------------------------ccCcEEEEeccCCC
Confidence 457799999977665544445555544454332 12259999999995
No 98
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=69.34 E-value=3.3 Score=44.23 Aligned_cols=43 Identities=23% Similarity=0.268 Sum_probs=25.9
Q ss_pred EEEEEecc-CCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCCh
Q 001736 383 WFDFMADT-GDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (1019)
Q Consensus 383 wFd~VADt-GDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~ 439 (1019)
.+.+++|+ |. ..+...+++.-. . .+..|.++.+||++--++..
T Consensus 16 ri~visDiHg~----~~~l~~~l~~~~--~--------~~~~d~l~~lGD~vdrG~~~ 59 (218)
T PRK09968 16 HIWVVGDIHGE----YQLLQSRLHQLS--F--------CPETDLLISVGDNIDRGPES 59 (218)
T ss_pred eEEEEEeccCC----HHHHHHHHHhcC--C--------CCCCCEEEECCCCcCCCcCH
Confidence 67899999 33 122233333211 0 23558899999999866654
No 99
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=68.11 E-value=45 Score=44.29 Aligned_cols=48 Identities=15% Similarity=0.028 Sum_probs=28.9
Q ss_pred CCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCcc
Q 001736 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (1019)
Q Consensus 565 ~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYsR 616 (1019)
-|-||+++|-..=...... ..+.....+.++. ..++++++||.|....
T Consensus 235 aDvII~l~H~G~~~~~~~~--~~en~~~~la~~~--~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 235 ADVIVALAHSGIESEYQSS--GAEDSVYDLAEKT--KGIDAIVAGHQHGLFP 282 (1163)
T ss_pred CCEEEEEeccCcCCCCCCC--CcchHHHHHHHhC--CCCcEEEeCCCccccc
Confidence 5889999998763221110 1111222344443 4699999999997654
No 100
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=66.04 E-value=7.2 Score=43.22 Aligned_cols=19 Identities=37% Similarity=0.599 Sum_probs=14.5
Q ss_pred CCccEEEEcccccCcCCCh
Q 001736 421 PRGDVLLIGGDLAYPNPSA 439 (1019)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~ 439 (1019)
|..|.++.+||+|--++..
T Consensus 25 ~~~D~Li~lGDlVdRGp~s 43 (257)
T cd07422 25 PAKDRLWLVGDLVNRGPDS 43 (257)
T ss_pred CCCCEEEEecCcCCCCcCH
Confidence 3558999999988766654
No 101
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=62.80 E-value=7.2 Score=41.81 Aligned_cols=12 Identities=25% Similarity=0.313 Sum_probs=9.9
Q ss_pred CccEEEEccccc
Q 001736 422 RGDVLLIGGDLA 433 (1019)
Q Consensus 422 RgdfLVlgGDlv 433 (1019)
..|.+|.+||++
T Consensus 33 ~~d~lvflGD~I 44 (222)
T cd07413 33 PERQVVFLGDLI 44 (222)
T ss_pred CCCEEEEeCccc
Confidence 457899999966
No 102
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=59.95 E-value=18 Score=39.93 Aligned_cols=21 Identities=38% Similarity=0.588 Sum_probs=18.0
Q ss_pred CcEEEeCCCCCCCCChhHHHHHhhc
Q 001736 485 PQCYIIPGNHDWFDGLNTFMRFICH 509 (1019)
Q Consensus 485 P~vfAIPGNHDWyDGL~aF~R~F~~ 509 (1019)
+.++.|||| .|+.+|..-|++
T Consensus 3 ~li~~IPGN----PGlv~fY~~Fl~ 23 (266)
T PF10230_consen 3 PLIVFIPGN----PGLVEFYEEFLS 23 (266)
T ss_pred EEEEEECCC----CChHHHHHHHHH
Confidence 469999999 899999888864
No 103
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=58.56 E-value=13 Score=39.56 Aligned_cols=43 Identities=26% Similarity=0.266 Sum_probs=25.5
Q ss_pred EEEEEecc-CCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCCh
Q 001736 383 WFDFMADT-GDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (1019)
Q Consensus 383 wFd~VADt-GDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~ 439 (1019)
.+.+|+|. |.- .+..+++++-. . .++.|-|+.+||++=-++..
T Consensus 18 ri~vigDIHG~~----~~L~~lL~~i~--~--------~~~~D~li~lGDlvDrGp~s 61 (218)
T PRK11439 18 HIWLVGDIHGCF----EQLMRKLRHCR--F--------DPWRDLLISVGDLIDRGPQS 61 (218)
T ss_pred eEEEEEcccCCH----HHHHHHHHhcC--C--------CcccCEEEEcCcccCCCcCH
Confidence 56889999 422 23334444321 1 13558899999988545544
No 104
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=58.42 E-value=58 Score=41.96 Aligned_cols=46 Identities=24% Similarity=0.271 Sum_probs=26.2
Q ss_pred CCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCCc
Q 001736 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (1019)
Q Consensus 565 ~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhYs 615 (1019)
-|-||+++|.-.- .+... ....|....+.++ ..|++++.||.|..-
T Consensus 310 aDvIIaLsH~G~~-~d~~~--~~~En~~~~LA~v--~GIDaIvgGHsH~~~ 355 (814)
T PRK11907 310 ADIVLVLSHSGIG-DDQYE--VGEENVGYQIASL--SGVDAVVTGHSHAEF 355 (814)
T ss_pred CCEEEEEeCCCcc-ccccc--ccccchhhHHhcC--CCCCEEEECCCCCcc
Confidence 4778888887643 22211 1122322222332 469999999999743
No 105
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=51.66 E-value=2e+02 Score=31.26 Aligned_cols=134 Identities=13% Similarity=0.094 Sum_probs=73.0
Q ss_pred CCCcEEEeCCCCCCCCChhHHHHHh---hccc--cCC-ccccCCCcceEEEECCCc-EEEEEEecCCCCC----------
Q 001736 483 DGPQCYIIPGNHDWFDGLNTFMRFI---CHKS--WLG-GWFMPQKKSYFALQLPKG-WWVFGLDLALHCD---------- 545 (1019)
Q Consensus 483 ~gP~vfAIPGNHDWyDGL~aF~R~F---~~r~--~lg-GW~mpQ~~SYFAlrLp~~-wWLlGLDsql~gd---------- 545 (1019)
-+..+..+--||-+=-|.+++.+.. -+.. +.| |....+.+.+..++.+.. .-+++.-....+.
T Consensus 74 ~G~d~vslANNH~~D~G~~gl~~Tl~~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~~~~~~~~~~~~~~~ 153 (250)
T PF09587_consen 74 AGFDVVSLANNHIFDYGEEGLLDTLEALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDGENGYSSANGNRPYG 153 (250)
T ss_pred cCCCEEEecCCCCccccHHHHHHHHHHHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcCCCCCcccccccccc
Confidence 4677899999996544555555533 2221 123 222223333455666432 3344544322110
Q ss_pred -----------CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeEEEcCccCCC
Q 001736 546 -----------IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (1019)
Q Consensus 546 -----------ID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~LvLAGHiHhY 614 (1019)
..+++.+.+.+.+++..+..|-|||+.|- ..... ..+ ....+++.++++...+++++.+|.|..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~i~~~i~~~r~~~D~vIv~~Hw-G~e~~---~~p-~~~q~~~a~~lidaGaDiIiG~HpHv~ 228 (250)
T PF09587_consen 154 FSYRPDKAGLNPNRPGIERIKEDIREARKKADVVIVSLHW-GIEYE---NYP-TPEQRELARALIDAGADIIIGHHPHVI 228 (250)
T ss_pred ccccccccccccccchHHHHHHHHHHHhcCCCEEEEEecc-CCCCC---CCC-CHHHHHHHHHHHHcCCCEEEeCCCCcc
Confidence 01233466666665433557899999996 22111 111 222334445555557999999999988
Q ss_pred cceeecC
Q 001736 615 MRHSYVP 621 (1019)
Q Consensus 615 sR~~~~~ 621 (1019)
|..+.-+
T Consensus 229 q~~E~y~ 235 (250)
T PF09587_consen 229 QPVEIYK 235 (250)
T ss_pred cceEEEC
Confidence 8887553
No 106
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=49.18 E-value=18 Score=41.35 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=14.4
Q ss_pred CccEEEEcccccCcCCChhhhhh
Q 001736 422 RGDVLLIGGDLAYPNPSAFTYER 444 (1019)
Q Consensus 422 RgdfLVlgGDlvYP~gs~e~Y~~ 444 (1019)
..+.+|.+||.+=-++...+..+
T Consensus 34 ~~~~iVfLGDyVDRGPdS~eVld 56 (304)
T cd07421 34 ASALVIFLGDYCDRGPETRKVID 56 (304)
T ss_pred CCcEEEEeCCcCCCCCCHHHHHH
Confidence 45689999996654554433333
No 107
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=47.77 E-value=15 Score=39.33 Aligned_cols=18 Identities=28% Similarity=0.451 Sum_probs=13.9
Q ss_pred CccEEEEcccccCcCCCh
Q 001736 422 RGDVLLIGGDLAYPNPSA 439 (1019)
Q Consensus 422 RgdfLVlgGDlvYP~gs~ 439 (1019)
..|.+|.+||++--++..
T Consensus 37 ~~d~lv~lGDlIDrG~~s 54 (234)
T cd07423 37 EGRRAVFVGDLVDRGPDS 54 (234)
T ss_pred CCCEEEEECCccCCCCCH
Confidence 468899999988766544
No 108
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=47.03 E-value=15 Score=40.01 Aligned_cols=50 Identities=20% Similarity=0.258 Sum_probs=27.0
Q ss_pred EEEEecc-CCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCcCCCh
Q 001736 384 FDFMADT-GDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (1019)
Q Consensus 384 Fd~VADt-GDG~nStYtVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~ 439 (1019)
+.+|||+ |. -.+..+++.+-..+... +....|..|.+|++||++=-++..
T Consensus 3 ~~vIGDIHG~----~~~L~~lL~~~~~~~~~--~~~~~~~~d~li~lGDliDRGp~S 53 (245)
T PRK13625 3 YDIIGDIHGC----YQEFQALTEKLGYNWSS--GLPVHPDQRKLAFVGDLTDRGPHS 53 (245)
T ss_pred eEEEEECccC----HHHHHHHHHHcCCCccc--CcccCCCCCEEEEECcccCCCcCh
Confidence 6788998 32 12355555542211100 111125568899999977655543
No 109
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=46.21 E-value=67 Score=39.89 Aligned_cols=126 Identities=19% Similarity=0.238 Sum_probs=71.5
Q ss_pred ccCCCCCcEEEeCCCCCCCCC----hhH--HHHHhhccccC------Cc--cccCCCcceEEEECCCcEEEEEEec----
Q 001736 479 LKQYDGPQCYIIPGNHDWFDG----LNT--FMRFICHKSWL------GG--WFMPQKKSYFALQLPKGWWVFGLDL---- 540 (1019)
Q Consensus 479 l~~~~gP~vfAIPGNHDWyDG----L~a--F~R~F~~r~~l------gG--W~mpQ~~SYFAlrLp~~wWLlGLDs---- 540 (1019)
+..|+.+ ..|||+.|.+ ++. |...+..+-.. .+ =..|--.+|+.+-.|++..+..+..
T Consensus 120 ~~~yD~l----~lGNHEl~~~~ve~l~~~~f~~~~k~~~la~Nv~~~~~~~~~~p~~~~~~t~~t~~~~~v~~vG~~~~~ 195 (602)
T KOG4419|consen 120 MMPYDIL----TLGNHELYQANVENLTEEYFLPAWKGPYLASNVQIFDSSNSFVPFGLEYATFLTPHGVVVLAVGFLCAS 195 (602)
T ss_pred cCccchh----hhcchhhhhhhhhccchhhhhhhhccceeecceEEecCchhhccccccceEEeccCceEEEEEEEeecc
Confidence 4445566 7899999877 221 44333222111 11 1123334688888888865554432
Q ss_pred -CCCC-CC-C-----HHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCcchhhhHHHHHhhhCCceeE-EEcCcc
Q 001736 541 -ALHC-DI-D-----VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKL-RIAGDM 611 (1019)
Q Consensus 541 -ql~g-dI-D-----~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~d~~~~~~~~~~l~~Lle~~L~~RV~L-vLAGHi 611 (1019)
+.+. +. + -.|.+|..+.++. +.-+-+|++.|-|.=.. ...+.+-..+++..+ .+++ ++.||.
T Consensus 196 f~~~~n~~~v~~veei~~~~~~~~m~~~--~~idlii~lgH~~~~~~------~e~~~~~~~ir~~~p-~t~IqviGGHs 266 (602)
T KOG4419|consen 196 FSGAANRTVVVPVEEITQSEWEQDMVNT--TDIDLIIALGHSPVRDD------DEWKSLHAEIRKVHP-NTPIQVIGGHS 266 (602)
T ss_pred ccccCCCcccccHHHHhccchHHHHhhc--cCccEEEEecccccccc------hhhhhHHHHHhhhCC-CCceEEECchh
Confidence 2111 11 1 2588899998863 56688888888887322 123333333444433 3455 999999
Q ss_pred C--CCcce
Q 001736 612 H--HYMRH 617 (1019)
Q Consensus 612 H--hYsR~ 617 (1019)
| .|.++
T Consensus 267 hird~a~~ 274 (602)
T KOG4419|consen 267 HIRDFAVY 274 (602)
T ss_pred hhhhhhhc
Confidence 9 67776
No 110
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=43.82 E-value=29 Score=38.76 Aligned_cols=56 Identities=16% Similarity=0.185 Sum_probs=30.8
Q ss_pred EEEEEeccCCCCCCchHHHHHhcCcccccccC--CCccccCCccEEEEcccccCcCCC
Q 001736 383 WFDFMADTGDGGNSSYSVARLLAQPHIRVTRD--DSVFTLPRGDVLLIGGDLAYPNPS 438 (1019)
Q Consensus 383 wFd~VADtGDG~nStYtVA~LlAqp~L~v~~~--~~~~~lPRgdfLVlgGDlvYP~gs 438 (1019)
++.+|+|++=|.+.....+-.+-+..|+-..+ ++.....+-.-||+.||.+=+.+.
T Consensus 1 ~i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~ 58 (257)
T cd07387 1 YIALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQ 58 (257)
T ss_pred CEEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCccccccc
Confidence 36789999766665555444443334331111 111112334469999998887653
No 111
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=36.19 E-value=26 Score=39.64 Aligned_cols=19 Identities=37% Similarity=0.651 Sum_probs=15.1
Q ss_pred CCccEEEEcccccCcCCCh
Q 001736 421 PRGDVLLIGGDLAYPNPSA 439 (1019)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~ 439 (1019)
|..|-++++||++--++..
T Consensus 27 ~~~D~l~~lGDlVdRGP~s 45 (279)
T TIGR00668 27 PGQDTLWLTGDLVARGPGS 45 (279)
T ss_pred CCCCEEEEeCCccCCCCCH
Confidence 3457899999999887765
No 112
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=35.77 E-value=45 Score=37.29 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=57.5
Q ss_pred CCCCcchhHHHHHhhheeeEEecCcHHHHHHHhccccchhh-HHHHHHHHHHhhcCccccCccCCCccchhHHHHHHHHH
Q 001736 29 YPHEHSRHAIIAVVVGCLFFISSDNMHTLIEKLDNNIKWWS-MYACLLGFFYFFSSPFIGKTITPSYSNFSRWYIAWILV 107 (1019)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~w~~~ 107 (1019)
+|+||++|+-+..++.+...+..=-+-..+...-.+.-|+. ..+++.|++.|+=.=+|-.|+..+.....+...
T Consensus 8 ~~~er~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~~~~~~~~~~~~----- 82 (301)
T PF14362_consen 8 SPAERNKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIRKSDGSRKRLLQ----- 82 (301)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHH-----
Confidence 79999999987766544433322222222222222222444 345566666666556666666555443333222
Q ss_pred HHHhcCCcccccccccccchhHHHHHHHHHHHHHHHHH
Q 001736 108 AAVYHLPSFQSMGVDLRMNLSLFLTIFLASVLFLLVFH 145 (1019)
Q Consensus 108 a~~~h~p~~~~~g~d~r~~~s~~~~~~~~s~~~~~~~~ 145 (1019)
+-.|.=|++.+-+-+|..+-|.+|+
T Consensus 83 -------------~~~R~~lAvliaivIs~pl~l~iF~ 107 (301)
T PF14362_consen 83 -------------ALPRLLLAVLIAIVISEPLELKIFE 107 (301)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2357778888899999998888886
No 113
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=26.26 E-value=2.1e+02 Score=31.03 Aligned_cols=80 Identities=20% Similarity=0.265 Sum_probs=41.7
Q ss_pred CCCcEEEeCCCCCCCCChhHHHHHhhccc----cCCccccCCCcceEEEECCCcEEEEEEecCCCCCCCHHHHHHHHHHH
Q 001736 483 DGPQCYIIPGNHDWFDGLNTFMRFICHKS----WLGGWFMPQKKSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELV 558 (1019)
Q Consensus 483 ~gP~vfAIPGNHDWyDGL~aF~R~F~~r~----~lgGW~mpQ~~SYFAlrLp~~wWLlGLDsql~gdID~~Q~~wFe~ll 558 (1019)
.++++.-||||.==|. +.|-+.... +... .+..-.||+++++.. +-+++ +..=..|.+++.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~----q~rsl~~~~~~~~~~~~--~~~~~d~ft~df~~~--~s~~~----g~~l~~q~~~~~~~i 70 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK----QVRSLASELQRKALLND--NSSHFDFFTVDFNEE--LSAFH----GRTLQRQAEFLAEAI 70 (225)
T ss_pred CCCEEEEECcCCCCHh----HHHHHHHHHhhhhhhcc--CccceeEEEeccCcc--ccccc----cccHHHHHHHHHHHH
Confidence 4567999999853222 333232111 1111 111234667766653 22222 222246777777765
Q ss_pred Hh---h----cCCCCeEEEEecC
Q 001736 559 KE---Q----VGERDSVIIMTHE 574 (1019)
Q Consensus 559 ~~---~----v~~~d~VIL~tHe 574 (1019)
+. . ..+.++||+++|.
T Consensus 71 ~~i~~~~~~~~~~~~~vilVgHS 93 (225)
T PF07819_consen 71 KYILELYKSNRPPPRSVILVGHS 93 (225)
T ss_pred HHHHHhhhhccCCCCceEEEEEc
Confidence 41 1 2467899999995
No 114
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=26.17 E-value=4.9e+02 Score=32.72 Aligned_cols=52 Identities=29% Similarity=0.394 Sum_probs=33.6
Q ss_pred CCCeEEEEEeccCC---------CCCCchHHHHHhc--CcccccccCCCccccCCccEEEEcccccCcC-CChhhhh
Q 001736 379 KEDLWFDFMADTGD---------GGNSSYSVARLLA--QPHIRVTRDDSVFTLPRGDVLLIGGDLAYPN-PSAFTYE 443 (1019)
Q Consensus 379 d~~~wFd~VADtGD---------G~nStYtVA~LlA--qp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~-gs~e~Y~ 443 (1019)
++.+.+-+-.|.-= |.||--+...+|. |.+ +-|+|++|||+..-+ ||.+...
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~-------------~VDmiLlGGDLFHeNkPSr~~L~ 74 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQEN-------------DVDMILLGGDLFHENKPSRKTLH 74 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhc-------------CCcEEEecCcccccCCccHHHHH
Confidence 56777778778722 3455555555543 332 349999999998766 7765443
No 115
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=23.91 E-value=1.5e+02 Score=30.96 Aligned_cols=41 Identities=22% Similarity=0.266 Sum_probs=23.6
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001736 535 VFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (1019)
Q Consensus 535 LlGLDsql~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~ 576 (1019)
++.|| .....+|...++.+.+.+.+..+++..+|+++|++.
T Consensus 146 llllD-EPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~ 186 (201)
T cd03231 146 LWILD-EPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL 186 (201)
T ss_pred EEEEe-CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch
Confidence 55556 344556666666666666532333456777777665
No 116
>TIGR02106 cyd_oper_ybgT cyd operon protein YbgT. This model describes a very small (as short as 33 amino acids) protein of unknown function, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It begins with an aromatic motif MWYFXW and appears to contain a membrane-spanning helix. This protein appears to be restricted to the Proteobacteria and exist in a single copy only. We suggest it may be a membrane subunit of the terminal oxidase. The family is named after the E. coli member YbgT. This model excludes the apparently related protein YccB.
Probab=21.10 E-value=58 Score=25.74 Aligned_cols=10 Identities=60% Similarity=1.438 Sum_probs=7.9
Q ss_pred HHHHHHHHHH
Q 001736 99 RWYIAWILVA 108 (1019)
Q Consensus 99 ~~~~~w~~~a 108 (1019)
+||.+||+..
T Consensus 1 MWYfaWilG~ 10 (30)
T TIGR02106 1 MWYFAWILGT 10 (30)
T ss_pred ChhHHHHHHH
Confidence 5899998754
No 117
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=21.10 E-value=1.8e+02 Score=30.13 Aligned_cols=41 Identities=15% Similarity=0.244 Sum_probs=29.3
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001736 535 VFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (1019)
Q Consensus 535 LlGLDsql~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~ 576 (1019)
++.+|- ....+|...++.+.+.+++..+.+..+|+++|++.
T Consensus 129 vlllDE-P~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~ 169 (192)
T cd03232 129 ILFLDE-PTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPS 169 (192)
T ss_pred EEEEeC-CCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCCh
Confidence 677774 45667888788888877643334678899999875
No 118
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=20.38 E-value=1.6e+02 Score=30.65 Aligned_cols=41 Identities=20% Similarity=0.201 Sum_probs=22.9
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001736 535 VFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (1019)
Q Consensus 535 LlGLDsql~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~ 576 (1019)
++-|| .....+|...++.+.+.+++..+.+..+|++||++.
T Consensus 158 lllLD-EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~ 198 (214)
T TIGR02673 158 LLLAD-EPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS 198 (214)
T ss_pred EEEEe-CCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 45555 334556666666666666532233456666667654
No 119
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.30 E-value=2.1e+02 Score=37.14 Aligned_cols=84 Identities=26% Similarity=0.414 Sum_probs=45.6
Q ss_pred CCCCCcEEEeCCCCCCCCChhHHHHHh---hccccCCccc-------cCCCcceEEEECCCcEEEEEEecCCCCCCCHHH
Q 001736 481 QYDGPQCYIIPGNHDWFDGLNTFMRFI---CHKSWLGGWF-------MPQKKSYFALQLPKGWWVFGLDLALHCDIDVYQ 550 (1019)
Q Consensus 481 ~~~gP~vfAIPGNHDWyDGL~aF~R~F---~~r~~lgGW~-------mpQ~~SYFAlrLp~~wWLlGLDsql~gdID~~Q 550 (1019)
++.|.++.-||||=-= --+.|-+ |++.+.+|-. -|.+-.+|++++... + ++.+|.+=..|
T Consensus 86 elsGIPVLFIPGNAGS----yKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe--~----tAm~G~~l~dQ 155 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGS----YKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE--F----TAMHGHILLDQ 155 (973)
T ss_pred cCCCceEEEecCCCCc----hHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch--h----hhhccHhHHHH
Confidence 4578889999999533 3455544 3333334321 122212344444332 1 12346666899
Q ss_pred HHHHHHHHH---hhcC--CCC------eEEEEecC
Q 001736 551 FKFFAELVK---EQVG--ERD------SVIIMTHE 574 (1019)
Q Consensus 551 ~~wFe~ll~---~~v~--~~d------~VIL~tHe 574 (1019)
-||.-+..+ .... ++- .||++.|.
T Consensus 156 tEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHS 190 (973)
T KOG3724|consen 156 TEYVNDAIKYILSLYRGEREYASPLPHSVILVGHS 190 (973)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCCceEEEEecc
Confidence 999988664 1111 223 49999885
Done!