Query         001736
Match_columns 1019
No_of_seqs    173 out of 253
Neff          4.1 
Searched_HMMs 29240
Date          Tue Mar 26 17:00:26 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/001736.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1032-1036//hhsearch_pdb/001736hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3tgh_A Glideosome-associated p   1.0       1       1  214.9  15.0  214  379-641     1-257 (342)
  2 1xzw_A Purple acid phosphatase   1.0       1       1  197.6  16.7  211  378-642   123-366 (426)
  3 2qfp_A Purple acid phosphatase   1.0       1       1  188.5  14.5  208  378-642   116-359 (424)
  4 1ute_A Protein (II purple acid   1.0       1       1  177.2  11.0  214  378-640     3-245 (313)
  5 2nxf_A Putative dimetal phosph   1.0       1       1  137.3  11.8  210  378-637     2-286 (322)
  6 2xmo_A LMO2642 protein; phosph   1.0       1       1  131.9  19.1  199  377-619    35-290 (443)
  7 3d03_A Phosphohydrolase; glyce   1.0       1       1  130.1  15.9  199  382-639     1-217 (274)
  8 3ib7_A ICC protein; metallopho   1.0       1       1  127.1  18.6  204  377-639    21-241 (330)
  9 2yeq_A Apased, PHOD, alkaline    1.0       1       1  124.1  20.1  199  379-620   114-390 (527)
 10 1uf3_A Hypothetical protein TT   1.0       1       1   93.6   9.8  176  380-612     4-190 (228)

No 1  
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=1.00  E-value=1  Score=214.92  Aligned_cols=214  Identities=14%  Similarity=0.082  Sum_probs=150.3

Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHCCCCC
Q ss_conf             98738999840698999804899985374322346888655677339999266557688923232002442033119999
Q 001736          379 KEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPP  458 (1019)
Q Consensus       379 d~~lwFd~VADtGDG~dStYsVA~LlAqp~L~v~~~~~~~~lPRgdlLIlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~  458 (1019)
                      +..+.|.++||+|.|...+..||..|++...+          .++||+|++||++|. |.......+|.+.|+..+..  
T Consensus         1 ~~~l~f~~igD~g~g~~~q~~va~~m~~~~~~----------~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~--   67 (342)
T 3tgh_A            1 KCQLRFASLGDWGKDTKGQILNAKYFKQFIKN----------ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSE--   67 (342)
T ss_dssp             CCCEEEEECCSCBSCCHHHHHHHHHHHHHHHH----------TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCC--
T ss_pred             CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH----------CCCCEEEECCCCCCC-CCCCCCCHHHHHHHHHHHHH--
T ss_conf             95599999964899980389999999999865----------699899988873068-97767507899999998640--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHH----------------CCCCCCCCCCCCCC
Q ss_conf             98656443478999999866557899919980789888999568999751----------------13468964468876
Q 001736          459 WYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFIC----------------HKSWLGGWFMPQKK  522 (1019)
Q Consensus       459 ~~~~e~ia~~~pe~p~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~----------------~r~~lgGW~mpQ~~  522 (1019)
                                          ++...+.++|+|||||||+++..++..+..                .+.....|.||.+ 
T Consensus        68 --------------------~~~~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~-  126 (342)
T 3tgh_A           68 --------------------EKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNY-  126 (342)
T ss_dssp             --------------------GGGTTCSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSSS-
T ss_pred             --------------------HHHHHCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
T ss_conf             --------------------04652898899688775679946751033302433332111000124567997407862-


Q ss_pred             CEEEEE----CC-------C-----CEEEEEEECCCCCC----------CCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf             139998----79-------9-----08999981687889----------8988999999998723099991999815798
Q 001736          523 SYFALQ----LP-------K-----GWWVFGLDLALHCD----------IDVYQFKFFAELVKEQVGERDSVIIMTHEPN  576 (1019)
Q Consensus       523 SYFAlk----Lp-------~-----~wWLiGLDtql~gd----------ID~~Q~~WLe~lL~~~v~~~d~VIL~tHeP~  576 (1019)
                       ||++.    ++       .     .+.|++|||+....          ....|++||++.+++    .+|+|++.|||.
T Consensus       127 -yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~----~~~~IV~~HhP~  201 (342)
T 3tgh_A          127 -WYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI----ADFIIVVGDQPI  201 (342)
T ss_dssp             -SEEEEEEEEEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH----CSEEEEECSSCS
T ss_pred             -EEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC----CCCEEEEECCCC
T ss_conf             -078888763056642124577774699999967000467765554667799999999986210----880899989887


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHH-CCCEEEEECCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCC
Q ss_conf             66644356765032699897650-895059983866897502204999994343299956999867
Q 001736          577 WLLDWYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFL  641 (1019)
Q Consensus       577 y~~~~~~~~~~g~~l~~Lle~~L-~~RV~LvLAGHiHhYsRy~~~~~~G~~~~~~lIVsGGGGAfL  641 (1019)
                      |..+.+.+.   ..+...+++++ +++|+++|+||+|.|+|..+.   |    .++||+|+||...
T Consensus       202 ~~~~~~~~~---~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~~---g----~~~iv~Ga~g~~~  257 (342)
T 3tgh_A          202 YSSGYSRGS---SYLAYYLLPLLKDAEVDLYISGHDNNMEVIEDN---D----MAHITCGSGSMSQ  257 (342)
T ss_dssp             SCSSTTCCC---HHHHHHTHHHHHHTTCCEEEECSSSSEEEEEET---T----EEEEEECCSSCCC
T ss_pred             CCCCCCCCC---HHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEC---C----CEEEEECCCCCCC
T ss_conf             777877876---899999999999809979997887644687609---9----4899969450235


No 2  
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=1.00  E-value=1  Score=197.57  Aligned_cols=211  Identities=18%  Similarity=0.238  Sum_probs=141.5

Q ss_pred             CCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCH----HHHHHCCCCCHHHH
Q ss_conf             89873899984069899980489998537432234688865567733999926655768892----32320024420331
Q 001736          378 EKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA----FTYERRLFRPFEYA  453 (1019)
Q Consensus       378 ~d~~lwFd~VADtGDG~dStYsVA~LlAqp~L~v~~~~~~~~lPRgdlLIlgGDlvYP~gs~----e~Y~~Rfv~PYe~A  453 (1019)
                      +++++.|.+++|+|.+.++..+++.+.+++             +++|++|++||++|..+..    ..++ .+.+.++..
T Consensus       123 ~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~-------------~~~D~vl~~GD~~y~~~~~~~~~~~~~-~~~~~l~~l  188 (426)
T 1xzw_A          123 PDVPYVFGLIGDIGQTHDSNTTLTHYEQNS-------------AKGQAVLFMGDLSYSNRWPNHDNNRWD-TWGRFSERS  188 (426)
T ss_dssp             TTCCEEEEEECSCTTBHHHHHHHHHHHHCT-------------TCCSEEEECSCCCCGGGSGGGCTHHHH-HHHHHHHHH
T ss_pred             CCCCEEEEEEEECCCCCCHHHHHHHHHHCC-------------CCCCEEEECCCHHHCCCCCCCCCHHHH-HHHHHHHHH
T ss_conf             988759999985788875689999998377-------------887789967874312567755324899-999998888


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCH--------HHHHHHHHCCCCCCCCCCCC-----
Q ss_conf             19999986564434789999998665578999199807898889995--------68999751134689644688-----
Q 001736          454 LQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL--------NTFMRFICHKSWLGGWFMPQ-----  520 (1019)
Q Consensus       454 l~~~~~~~~e~ia~~~pe~p~~~~~l~~~~gP~ifAIPGNHDWyDGL--------~aF~R~F~~r~~lgGW~mpQ-----  520 (1019)
                                                .. ..| +++++||||+..+.        ..|...         |.||.     
T Consensus       189 --------------------------~~-~~P-~~~v~GNHD~~~~~~~~~~~~~~~~~~~---------f~~p~~~~~~  231 (426)
T 1xzw_A          189 --------------------------VA-YQP-WIWTAGNHEIDYAPDIGEYQPFVPFTNR---------YPTPHEASGS  231 (426)
T ss_dssp             --------------------------HT-TSC-EECCCCGGGCCCBGGGTBCSTTHHHHHH---------SCCCCGGGTC
T ss_pred             --------------------------HH-CCC-EEEECCCCCCCCCCCCCCCCCCHHHEEE---------EECCCCCCCC
T ss_conf             --------------------------72-599-7993656566568765666677402578---------7588655788


Q ss_pred             -CCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHC--CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             -761399987990899998168788989889999999987230--99991999815798666443567650326998976
Q 001736          521 -KKSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQV--GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICD  597 (1019)
Q Consensus       521 -~~SYFAlkLp~~wWLiGLDtql~gdID~~Q~~WLe~lL~~~v--~~~d~VIL~tHeP~y~~~~~~~~~~g~~l~~Lle~  597 (1019)
                       ...||+++.+. ++|++||+........+|++||++.+++ .  ...+|+|+++|+|.|..+..+..+ +..++..+++
T Consensus       232 ~~~~~ys~~~g~-~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~-~~~~~~~w~Iv~~H~P~~~~~~~~~~~-~~~~r~~l~~  308 (426)
T 1xzw_A          232 GDPLWYAIKRAS-AHIIVLSSYSGFVKYSPQYKWFTSELEK-VNRSETPWLIVLVHAPLYNSYEAHYME-GEAMRAIFEP  308 (426)
T ss_dssp             SSTTSEEEEETT-EEEEECCTTSCCSTTSHHHHHHHHHHHH-CCTTTCCEEEEECSSCSSCCBSTTTTT-THHHHHHHHH
T ss_pred             CCCCEEEEEECC-EEEEEEECCCCCCCCHHHHHHHHHHHHH-HHHCCCCEEEEEECCCCEECCCCCCCC-CHHHHHHHHH
T ss_conf             888769999799-9999961754678877999999999875-110389889999466840478755677-8899999999


Q ss_pred             HH-CCCEEEEECCCCCCCCCEEECCCC------C------CCCCCEEEEECCCCCCCC
Q ss_conf             50-895059983866897502204999------9------943432999569998677
Q 001736          598 YL-KGRCKLRIAGDMHHYMRHSYVPSD------G------PVYVQHLLVNGCGGAFLH  642 (1019)
Q Consensus       598 ~L-~~RV~LvLAGHiHhYsRy~~~~~~------G------~~~~~~lIVsGGGGAfLh  642 (1019)
                      ++ +++|+++|+||+|.|+|..+..+.      |      ...++.+||+|+||+...
T Consensus       309 ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~  366 (426)
T 1xzw_A          309 YFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEG  366 (426)
T ss_dssp             HHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTC
T ss_pred             HHHHHCCCEEEECCHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf             9998299799976711011330000761123478532246998438999688755455


No 3  
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=1.00  E-value=1  Score=188.48  Aligned_cols=208  Identities=17%  Similarity=0.234  Sum_probs=136.6

Q ss_pred             CCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCH-------HHHHHCCCCCH
Q ss_conf             89873899984069899980489998537432234688865567733999926655768892-------32320024420
Q 001736          378 EKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA-------FTYERRLFRPF  450 (1019)
Q Consensus       378 ~d~~lwFd~VADtGDG~dStYsVA~LlAqp~L~v~~~~~~~~lPRgdlLIlgGDlvYP~gs~-------e~Y~~Rfv~PY  450 (1019)
                      +++++.|.+++|+|.+.++..+++.+.++             .+++|++|++||++|..+..       ++|. +++++.
T Consensus       116 ~~~~~~f~~igD~~~~~~~~~~l~~~~~~-------------~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~-~~l~~~  181 (424)
T 2qfp_A          116 LDVPYTFGLIGDLGQSFDSNTTLSHYELS-------------PKKGQTVLFVGDLSYADRYPNHDNVRWDTWG-RFTERS  181 (424)
T ss_dssp             TTCCEEEEEECSCTTBHHHHHHHHHHHTC-------------SSCCCEEEECSCCSCGGGSGGGCTHHHHHHH-HHHHHH
T ss_pred             CCCCEEEEEEEECCCCCCHHHHHHHHHHC-------------CCCCCEEEECCCCCCCCCCCCCCCHHHHHHH-HHHHHH
T ss_conf             98875999998079877768999999847-------------7788789980860233545545513799999-999999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCH--------HHHHHHHHCCCCCCCCCCCC--
Q ss_conf             33119999986564434789999998665578999199807898889995--------68999751134689644688--
Q 001736          451 EYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL--------NTFMRFICHKSWLGGWFMPQ--  520 (1019)
Q Consensus       451 e~Al~~~~~~~~e~ia~~~pe~p~~~~~l~~~~gP~ifAIPGNHDWyDGL--------~aF~R~F~~r~~lgGW~mpQ--  520 (1019)
                      .                             . ..| +++++||||+....        ..|...         |.||.  
T Consensus       182 ~-----------------------------~-~~P-~~~v~GNHD~~~~~~~~~~~~~~~~~~~---------f~~P~~~  221 (424)
T 2qfp_A          182 V-----------------------------A-YQP-WIWTAGNHEIEFAPEINETEPFKPFSYR---------YHVPYEA  221 (424)
T ss_dssp             H-----------------------------T-TSC-EEECCCHHHHCCBGGGTBCSTTHHHHHH---------CCCCGGG
T ss_pred             H-----------------------------H-CCC-EEEECCCCCCCCCCCCCCCCCCHHHHHH---------CCCCCCC
T ss_conf             8-----------------------------4-597-5761577643367765556564535501---------0387555


Q ss_pred             ----CCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC--CCCEEEEEECCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             ----7613999879908999981687889898899999999872309--9991999815798666443567650326998
Q 001736          521 ----KKSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQVG--ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHL  594 (1019)
Q Consensus       521 ----~~SYFAlkLp~~wWLiGLDtql~gdID~~Q~~WLe~lL~~~v~--~~d~VIL~tHeP~y~~~~~~~~~~g~~l~~L  594 (1019)
                          ...||+++.+ +++|++||+........+|++||++.+++ .+  ..+|+|++.|+|.+..+..+.. .+..++..
T Consensus       222 ~~~~~~~~ys~~~g-~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~-~~~~~~~~~Iv~~H~P~~~~~~~~~~-~~~~~r~~  298 (424)
T 2qfp_A          222 SQSTSPFWYSIKRA-SAHIIVLSSYSAYGRGTPQYTWLKKELRK-VKRSETPWLIVLMHSPLYNSYNHHFM-EGEAMRTK  298 (424)
T ss_dssp             GTCSSTTSEEEEET-TEEEEECCTTSCCSTTSHHHHHHHHHHHH-CCTTTCCEEEEECSSCSSCCBSTTTT-TTHHHHHH
T ss_pred             CCCCCCCEEEEEEC-CEEEEEECCCCCCCCCHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEECCCCCCC-CCHHHHHH
T ss_conf             67888857999989-89999962886678857999999999865-01038998999947473333742345-52789999


Q ss_pred             HHHHH-CCCEEEEECCCCCCCCCEEECCCC------C------CCCCCEEEEECCCCCCCC
Q ss_conf             97650-895059983866897502204999------9------943432999569998677
Q 001736          595 ICDYL-KGRCKLRIAGDMHHYMRHSYVPSD------G------PVYVQHLLVNGCGGAFLH  642 (1019)
Q Consensus       595 le~~L-~~RV~LvLAGHiHhYsRy~~~~~~------G------~~~~~~lIVsGGGGAfLh  642 (1019)
                      +++++ +++|+++|+||+|.|+|..+..+.      |      ...++.+||+|+||+...
T Consensus       299 l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~  359 (424)
T 2qfp_A          299 FEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGV  359 (424)
T ss_dssp             HHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSC
T ss_pred             HHHHHHHHCCCEEEECCHHHHHEECCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf             9999998599699977732332103101760121488421124898747999667877665


No 4  
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=1.00  E-value=1  Score=177.19  Aligned_cols=214  Identities=18%  Similarity=0.272  Sum_probs=135.7

Q ss_pred             CCCCEEEEEEECCCCCCCC------CHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHH
Q ss_conf             8987389998406989998------0489998537432234688865567733999926655768892323200244203
Q 001736          378 EKEDLWFDFMADTGDGGNS------SYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFE  451 (1019)
Q Consensus       378 ~d~~lwFd~VADtGDG~dS------tYsVA~LlAqp~L~v~~~~~~~~lPRgdlLIlgGDlvYP~gs~e~Y~~Rfv~PYe  451 (1019)
                      +++++.|.+++|++-+...      +..++..+++.. +         ..++|++|++||++|..+.......++.+.++
T Consensus         3 ~~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~-~---------~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~   72 (313)
T 1ute_A            3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTV-K---------TLGADFILSLGDNFYFTGVHDAKDKRFQETFE   72 (313)
T ss_dssp             CCCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHH-H---------HHCCSEEEECSCCSTTTCCSSTTCTHHHHHTT
T ss_pred             CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH-H---------HCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             8885699998026899976665703999999999999-7---------66999999788715767888755089999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC--
Q ss_conf             311999998656443478999999866557899919980789888999568999751134689644688761399987--
Q 001736          452 YALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQL--  529 (1019)
Q Consensus       452 ~Al~~~~~~~~e~ia~~~pe~p~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlkL--  529 (1019)
                      ..+..                       ......++++||||||++.+......+..   ....|.+|.  .||+...  
T Consensus        73 ~~~~~-----------------------~~l~~~p~~~v~GNHD~~~~~~~~~~~~~---~~~~~~~~~--~~y~~~~~~  124 (313)
T 1ute_A           73 DVFSD-----------------------PSLRNVPWHVLAGNHDHLGNVSAQIAYSK---ISKRWNFPS--PYYRLRFKI  124 (313)
T ss_dssp             TTSCS-----------------------GGGTTCCEEECCCHHHHHSCHHHHHHGGG---TSTTEECCS--SSEEEEEEC
T ss_pred             HHCCC-----------------------HHHCCCCEEEECCCCCCCCCCCCCCCCCC---CCCCCCCCC--CCEEEEEEC
T ss_conf             87082-----------------------55528887997987756798410136434---688760765--326899823


Q ss_pred             C---CCEEEEEEECCC-----------------CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHH
Q ss_conf             9---908999981687-----------------88989889999999987230999919998157986664435676503
Q 001736          530 P---KGWWVFGLDLAL-----------------HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGK  589 (1019)
Q Consensus       530 p---~~wWLiGLDtql-----------------~gdID~~Q~~WLe~lL~~~v~~~d~VIL~tHeP~y~~~~~~~~~~g~  589 (1019)
                      |   .++.+++||+..                 .+.+...|++||++.+++ . +++++|+++|+|.+..+.....   .
T Consensus       125 ~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~-~-~~~~~iv~~H~p~~~~~~~~~~---~  199 (313)
T 1ute_A          125 PRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA-A-KEDYVLVAGHYPVWSIAEHGPT---H  199 (313)
T ss_dssp             TTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHH-C-CCSEEEEECSSCSSCCSSSCCC---H
T ss_pred             CCCCCEEEEEEEECHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-C-CCCEEEEEECCCCCCCCCCCCC---H
T ss_conf             899966999999786784757531135667765520089999999999974-8-9972999979787248888980---8


Q ss_pred             HHHHHHHHHH-CCCEEEEECCCCCCCCCEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf             2699897650-89505998386689750220499999434329995699986
Q 001736          590 NVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAF  640 (1019)
Q Consensus       590 ~l~~Lle~~L-~~RV~LvLAGHiHhYsRy~~~~~~G~~~~~~lIVsGGGGAf  640 (1019)
                      .+...+.+++ +++|+++|+||+|.+++.....  |    .++|++|+||..
T Consensus       200 ~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~--g----~~~i~~gs~~~~  245 (313)
T 1ute_A          200 CLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDEN--G----LGFVLSGAGNFM  245 (313)
T ss_dssp             HHHHHTHHHHHHTTCSEEEECSSSSEEEEECTT--C----CEEEEECBSSCC
T ss_pred             HHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCC--C----CEEEEECCCCCC
T ss_conf             999999999998498699988734544201789--9----559997987676


No 5  
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=1.00  E-value=1  Score=137.32  Aligned_cols=210  Identities=13%  Similarity=0.056  Sum_probs=123.0

Q ss_pred             CCCCEEEEEEECCCCCCCC-C---------------HHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC---
Q ss_conf             8987389998406989998-0---------------48999853743223468886556773399992665576889---
Q 001736          378 EKEDLWFDFMADTGDGGNS-S---------------YSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPS---  438 (1019)
Q Consensus       378 ~d~~lwFd~VADtGDG~dS-t---------------YsVA~LlAqp~L~v~~~~~~~~lPRgdlLIlgGDlvYP~gs---  438 (1019)
                      .+..+.|.+++|+.-+... .               ..+..+++.-.           .+++|++|++||+++....   
T Consensus         2 ~~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~d~vi~~GD~~~~~~~~~~   70 (322)
T 2nxf_A            2 EDPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWR-----------RERVQCVVQLGDIIDGHNRRRD   70 (322)
T ss_dssp             -CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHH-----------HTTCSEEEECSCCBCTHHHHTT
T ss_pred             CCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-----------HCCCCEEEECCCCCCCCCCCCH
T ss_conf             98854999982326664576422234247788889999999999997-----------3699899989875588877646


Q ss_pred             --HHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC-HHHHHHHHHCCC----
Q ss_conf             --2323200244203311999998656443478999999866557899919980789888999-568999751134----
Q 001736          439 --AFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDG-LNTFMRFICHKS----  511 (1019)
Q Consensus       439 --~e~Y~~Rfv~PYe~Al~~~~~~~~e~ia~~~pe~p~~~~~l~~~~gP~ifAIPGNHDWyDG-L~aF~R~F~~r~----  511 (1019)
                        .+.|+ ++.+.++                             +...| ++.+|||||++.. ...|.+.+....    
T Consensus        71 ~~~~~~~-~~~~~l~-----------------------------~~~~p-~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~  119 (322)
T 2nxf_A           71 ASDRALD-TVMAELD-----------------------------ACSVD-VHHVWGNHEFYNFSRPSLLSSRLNSAQRTG  119 (322)
T ss_dssp             CHHHHHH-HHHHHHH-----------------------------TTCSE-EEECCCHHHHHHCCHHHHHTSTTCCCC---
T ss_pred             HHHHHHH-HHHHHHH-----------------------------HCCCC-EEEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             7899999-9999998-----------------------------56986-899668788553898998665178644456


Q ss_pred             CCCCCCCCC-CCCEEEEECCCCEEEEEEECCCC----------------------------------------------C
Q ss_conf             689644688-76139998799089999816878----------------------------------------------8
Q 001736          512 WLGGWFMPQ-KKSYFALQLPKGWWVFGLDLALH----------------------------------------------C  544 (1019)
Q Consensus       512 ~lgGW~mpQ-~~SYFAlkLp~~wWLiGLDtql~----------------------------------------------g  544 (1019)
                      ...+..+|. ...||++....++.+++||+...                                              +
T Consensus       120 ~~~~~~~~~~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~  199 (322)
T 2nxf_A          120 TDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNG  199 (322)
T ss_dssp             ---CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCC
T ss_pred             CCCCCCCCCCCCEEEEEECCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             55433467899527998527988999981750101235778725678999986328541124586543343334433478


Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH-CC-CEEEEECCCCCCCCCEEECCC
Q ss_conf             9898899999999872309999199981579866644356765032699897650-89-505998386689750220499
Q 001736          545 DIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-KG-RCKLRIAGDMHHYMRHSYVPS  622 (1019)
Q Consensus       545 dID~~Q~~WLe~lL~~~v~~~d~VIL~tHeP~y~~~~~~~~~~g~~l~~Lle~~L-~~-RV~LvLAGHiHhYsRy~~~~~  622 (1019)
                      .+...|++|+++.+++.-..+.++|+++|+|.+....... ....+. ..+.+++ ++ +|+++|+||+|.+++..... 
T Consensus       200 ~~~~~q~~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~~~~-~~~~~~-~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~-  276 (322)
T 2nxf_A          200 GFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPI-CLAWNH-EAVLSVLRSHQSVLCFIAGHDHDGGRCTDSS-  276 (322)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSCGG-GSCTTH-HHHHHHHHTCTTEEEEEECSCTTCEEEECTT-
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC-CCCCCH-HHHHHHHHCCCCEEEEECCCCCCCCCEECCC-
T ss_conf             6489999999999987775598089998168988888752-455589-9999998538986899828867898222469-


Q ss_pred             CCCCCCCEEEEECCC
Q ss_conf             999434329995699
Q 001736          623 DGPVYVQHLLVNGCG  637 (1019)
Q Consensus       623 ~G~~~~~~lIVsGGG  637 (1019)
                       |    .++|++|+.
T Consensus       277 -g----~~~i~~~~~  286 (322)
T 2nxf_A          277 -G----AQHITLEGV  286 (322)
T ss_dssp             -S----CEEEECCCG
T ss_pred             -C----CEEEEECCH
T ss_conf             -9----369981505


No 6  
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=1.00  E-value=1  Score=131.93  Aligned_cols=199  Identities=18%  Similarity=0.217  Sum_probs=115.6

Q ss_pred             CCCCCEEEEEEECCCCCCCC-----------------------CHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf             78987389998406989998-----------------------0489998537432234688865567733999926655
Q 001736          377 SEKEDLWFDFMADTGDGGNS-----------------------SYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLA  433 (1019)
Q Consensus       377 ~~d~~lwFd~VADtGDG~dS-----------------------tYsVA~LlAqp~L~v~~~~~~~~lPRgdlLIlgGDlv  433 (1019)
                      .+++.+.|.+++|+--+...                       ...+..++.+-.           ..++|++|++||++
T Consensus        35 ~~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~d~vi~~GDl~  103 (443)
T 2xmo_A           35 EKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVE-----------SKKTDVLIISGDLT  103 (443)
T ss_dssp             CSCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHH-----------HHTCSEEEEESCCB
T ss_pred             CCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH-----------HCCCCEEEECCCCC
T ss_conf             6788707999837777774234541233103333345432247999999999999-----------72999999879989


Q ss_pred             CCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC--------------
Q ss_conf             768892323200244203311999998656443478999999866557899919980789888999--------------
Q 001736          434 YPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDG--------------  499 (1019)
Q Consensus       434 YP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~ia~~~pe~p~~~~~l~~~~gP~ifAIPGNHDWyDG--------------  499 (1019)
                      ..+ ...+|+. +.+-++.                          +.. .+.++++||||||.+.+              
T Consensus       104 ~~~-~~~~~~~-~~~~l~~--------------------------l~~-~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~  154 (443)
T 2xmo_A          104 NNG-EKTSHEE-LAKKLTQ--------------------------VEK-NGTQVFVVPGNHDINNPWARKFEKDKQLPTD  154 (443)
T ss_dssp             SSC-CHHHHHH-HHHHHHH--------------------------HHH-TTCEEEEECCTTTSSCTTCEEEETTEEEECC
T ss_pred             CCC-CHHHHHH-HHHHHHH--------------------------HHH-CCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             998-7789999-9999999--------------------------986-7984999788689987532224774345535


Q ss_pred             ---HHHHHHHHHCCCCCCCC-CCCCCCCEEEEECCCCEEEEEEECCCC------------CCCCHHHHHHHHHHHHHHCC
Q ss_conf             ---56899975113468964-468876139998799089999816878------------89898899999999872309
Q 001736          500 ---LNTFMRFICHKSWLGGW-FMPQKKSYFALQLPKGWWVFGLDLALH------------CDIDVYQFKFFAELVKEQVG  563 (1019)
Q Consensus       500 ---L~aF~R~F~~r~~lgGW-~mpQ~~SYFAlkLp~~wWLiGLDtql~------------gdID~~Q~~WLe~lL~~~v~  563 (1019)
                         ...|.+.|....+.... ..+...+| .+....++++++||+...            +.++..|++|+++.+++...
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~  233 (443)
T 2xmo_A          155 TISPTDFSKIYSDFGYEDAISSDEFSLSY-LAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK  233 (443)
T ss_dssp             CCCHHHHHHHTCCCCCTTCSEECSSSSCE-EECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCCHHHHHCCCCCCCEE-EEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             36999999886213714442068888328-99627987999966787676655678776886299999999999999987


Q ss_pred             CCCEEEEEECCCCCCCCCCCCCC----CHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEE
Q ss_conf             99919998157986664435676----503269989765089505998386689750220
Q 001736          564 ERDSVIIMTHEPNWLLDWYFNNV----SGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSY  619 (1019)
Q Consensus       564 ~~d~VIL~tHeP~y~~~~~~~~~----~g~~l~~Lle~~L~~RV~LvLAGHiHhYsRy~~  619 (1019)
                      .+.++|+++|+|.+.......+.    ....+..+++   +++++++|+||+|.......
T Consensus       234 ~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~---~~~v~lvl~GH~H~~~~~~~  290 (443)
T 2xmo_A          234 NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALT---EGAMDFSLSGHIHTQNIRSA  290 (443)
T ss_dssp             TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHH---HTTCCEEEECSSCSCEEEEE
T ss_pred             CCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH---HCCCEEEEECCCCCCCHHHC
T ss_conf             5986999988887645654356543465999999999---76985999898665721003


No 7  
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=1.00  E-value=1  Score=130.09  Aligned_cols=199  Identities=15%  Similarity=0.115  Sum_probs=117.8

Q ss_pred             EEEEEEECCCCCC---------CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHHH
Q ss_conf             3899984069899---------9804899985374322346888655677339999266557688923232002442033
Q 001736          382 LWFDFMADTGDGG---------NSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEY  452 (1019)
Q Consensus       382 lwFd~VADtGDG~---------dStYsVA~LlAqp~L~v~~~~~~~~lPRgdlLIlgGDlvYP~gs~e~Y~~Rfv~PYe~  452 (1019)
                      +.|..++|+--+.         +.......++++-..         ..|++|+++++||+++.+ ..++|+     .+..
T Consensus         1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~---------~~~~~d~vi~~GDl~~~~-~~~~~~-----~~~~   65 (274)
T 3d03_A            1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNA---------LRERPDAVVVSGDIVNCG-RPEEYQ-----VARQ   65 (274)
T ss_dssp             CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHT---------CSSCCSEEEEESCCBSSC-CHHHHH-----HHHH
T ss_pred             CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---------CCCCCCEEEECCCCCCCC-CHHHHH-----HHHH
T ss_conf             9899994677588885303665879999999999983---------599988899888889999-999999-----9999


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCC--CCCEEEEECC
Q ss_conf             11999998656443478999999866557899919980789888999568999751134689644688--7613999879
Q 001736          453 ALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQ--KKSYFALQLP  530 (1019)
Q Consensus       453 Al~~~~~~~~e~ia~~~pe~p~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ--~~SYFAlkLp  530 (1019)
                      .+.                         .+..| +++|+||||++..   +.+.+... +.   ..+.  ...|++++.+
T Consensus        66 ~l~-------------------------~l~~p-~~~v~GNHD~~~~---~~~~~~~~-~~---~~~~~~~~~~~~~~~~  112 (274)
T 3d03_A           66 ILG-------------------------SLNYP-LYLIPGNHDDKAL---FLEYLQPL-CP---QLGSDANNMRCAVDDF  112 (274)
T ss_dssp             HHT-------------------------TCSSC-EEEECCTTSCHHH---HHHHHGGG-SG---GGCSCGGGCCEEECSS
T ss_pred             HHH-------------------------HCCCC-EEEECCCCCCHHH---HHHHHHHH-HC---CCCCCCCCEEEEEEEC
T ss_conf             997-------------------------56997-8997998988799---99986465-04---7666778457999709


Q ss_pred             CCEEEEEEECCC----CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC-HHHHHHHHHHHH-CC-CE
Q ss_conf             908999981687----889898899999999872309999199981579866644356765-032699897650-89-50
Q 001736          531 KGWWVFGLDLAL----HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVS-GKNVKHLICDYL-KG-RC  603 (1019)
Q Consensus       531 ~~wWLiGLDtql----~gdID~~Q~~WLe~lL~~~v~~~d~VIL~tHeP~y~~~~~~~~~~-g~~l~~Lle~~L-~~-RV  603 (1019)
                      . +.+++||+..    .+.++..|++|+++.+++ . +++++|+++|+|.+..+....+.. ..+.. .+.+++ ++ ++
T Consensus       113 ~-~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~-~-~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~v  188 (274)
T 3d03_A          113 A-TRLLFIDSSRAGTSKGWLTDETISWLEAQLFE-G-GDKPATIFMHHPPLPLGNAQMDPIACENGH-RLLALVERFPSL  188 (274)
T ss_dssp             S-SEEEECCCCCTTCSSBCCCHHHHHHHHHHHHH-H-TTSCEEEEESSCSSCCSCTTTGGGSBTTTH-HHHHHHHHCTTE
T ss_pred             C-EEEEEEECCCCCCCCCEECHHHHHHHHHHHHH-C-CCCCEEEEECCCCCCCCCCCCCCCCCCCHH-HHHHHHHHCCCC
T ss_conf             9-89999858988888875399999999999975-8-999889998989865697334731375889-999999729994


Q ss_pred             EEEECCCCCCCCCEEECCCCCCCCCCEEEEECCCCC
Q ss_conf             599838668975022049999943432999569998
Q 001736          604 KLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA  639 (1019)
Q Consensus       604 ~LvLAGHiHhYsRy~~~~~~G~~~~~~lIVsGGGGA  639 (1019)
                      +++++||+|.++.....   |   . .+++++|.+.
T Consensus       189 ~~vl~GH~H~~~~~~~~---g---~-~~~~~pg~~~  217 (274)
T 3d03_A          189 TRIFCGHNHSLTMTQYR---Q---A-LISTLPGTVH  217 (274)
T ss_dssp             EEEEECSSSSCEEEEET---T---E-EEEECCCSSC
T ss_pred             EEEEECCCCCCHHHEEC---C---E-EEEECCCCCE
T ss_conf             09986877871230599---8---8-9997697413


No 8  
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=1.00  E-value=1  Score=127.12  Aligned_cols=204  Identities=19%  Similarity=0.206  Sum_probs=123.1

Q ss_pred             CCCCCEEEEEEECCCCCC---------CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHH--C
Q ss_conf             789873899984069899---------98048999853743223468886556773399992665576889232320--0
Q 001736          377 SEKEDLWFDFMADTGDGG---------NSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYER--R  445 (1019)
Q Consensus       377 ~~d~~lwFd~VADtGDG~---------dStYsVA~LlAqp~L~v~~~~~~~~lPRgdlLIlgGDlvYP~gs~e~Y~~--R  445 (1019)
                      .++.++.|.+++|+--+.         +.......++.+-. +.        .+++|+++++||++.. +..++|+.  .
T Consensus        21 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~-~~--------~~~~d~vi~~GDl~~~-~~~~~~~~~~~   90 (330)
T 3ib7_A           21 HPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLN-QS--------GLRPDAIVFTGDLADK-GEPAAYRKLRG   90 (330)
T ss_dssp             SCCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHH-HH--------TCCCSEEEECSCCBTT-CCHHHHHHHHH
T ss_pred             CCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HC--------CCCCCEEEECCCCCCC-CCHHHHHHHHH
T ss_conf             88987089998478637998652466587999999999999-51--------8998999987888899-99999999999


Q ss_pred             CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEE
Q ss_conf             24420331199999865644347899999986655789991998078988899956899975113468964468876139
Q 001736          446 LFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYF  525 (1019)
Q Consensus       446 fv~PYe~Al~~~~~~~~e~ia~~~pe~p~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYF  525 (1019)
                      +++++...                            .. .++++|+||||+..   .+.+.+......      ....|+
T Consensus        91 ~l~~l~~~----------------------------~~-~pv~~v~GNHD~~~---~~~~~~~~~~~~------~~~~~~  132 (330)
T 3ib7_A           91 LVEPFAAQ----------------------------LG-AELVWVMGNHDDRA---ELRKFLLDEAPS------MAPLDR  132 (330)
T ss_dssp             HHHHHHHH----------------------------HT-CEEEECCCTTSCHH---HHHHHHHCCCCC------CSCCCE
T ss_pred             HHHHHHHH----------------------------CC-CCEEEECCCCCCHH---HHHHHHCCCCCC------CCCCCE
T ss_conf             99998762----------------------------49-97899689998878---999874025665------677424


Q ss_pred             EEECCCCEEEEEEECCC----CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC-HHHHHHHHHHHH-
Q ss_conf             99879908999981687----889898899999999872309999199981579866644356765-032699897650-
Q 001736          526 ALQLPKGWWVFGLDLAL----HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVS-GKNVKHLICDYL-  599 (1019)
Q Consensus       526 AlkLp~~wWLiGLDtql----~gdID~~Q~~WLe~lL~~~v~~~d~VIL~tHeP~y~~~~~~~~~~-g~~l~~Lle~~L-  599 (1019)
                      .++.+. +.+++||+..    .+.+...|++|+++.+++ . ++..+|+++|||++.......+.. ..+.. .+.+++ 
T Consensus       133 ~~~~~~-~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~~-~-~~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~-~l~~~l~  208 (330)
T 3ib7_A          133 VCMIDG-LRIIVLDTSVPGHHHGEIRASQLGWLAEELAT-P-APDGTILALHHPPIPSVLDMAVTVELRDQA-ALGRVLR  208 (330)
T ss_dssp             EEEETT-EEEEECCCCCTTCCSBCCCHHHHHHHHHHTTS-C-CTTCEEEECSSCSSCCSSGGGGGGSBSCHH-HHHHHHT
T ss_pred             EEEECC-EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH-C-CCCCEEEEEECCCCCCCCCCCCCCCCCCHH-HHHHHHH
T ss_conf             998499-89999568899987880199999999999975-6-668859999799777774412332546789-9999985


Q ss_pred             CCCEEEEECCCCCCCCCEEECCCCCCCCCCEEEEECCCCC
Q ss_conf             8950599838668975022049999943432999569998
Q 001736          600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA  639 (1019)
Q Consensus       600 ~~RV~LvLAGHiHhYsRy~~~~~~G~~~~~~lIVsGGGGA  639 (1019)
                      +++++++++||+|..+.....       +..++++|+.+.
T Consensus       209 ~~~v~~v~~GH~H~~~~~~~~-------g~~~~~~gs~~~  241 (330)
T 3ib7_A          209 GTDVRAILAGHLHYSTNATFV-------GIPVSVASATCY  241 (330)
T ss_dssp             TSSEEEEEECSSSSCEEEEET-------TEEEEECCCSSC
T ss_pred             CCCCEEEEECCCCCCCCCEEC-------CEEEEECCCCEE
T ss_conf             469559998997886652499-------998993495154


No 9  
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=1.00  E-value=1  Score=124.07  Aligned_cols=199  Identities=12%  Similarity=0.085  Sum_probs=117.1

Q ss_pred             CCCEEEEEEECCCC--CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCH-----------------
Q ss_conf             98738999840698--99980489998537432234688865567733999926655768892-----------------
Q 001736          379 KEDLWFDFMADTGD--GGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA-----------------  439 (1019)
Q Consensus       379 d~~lwFd~VADtGD--G~dStYsVA~LlAqp~L~v~~~~~~~~lPRgdlLIlgGDlvYP~gs~-----------------  439 (1019)
                      ..++.|.+++|.|-  |.   +.+-+-+++.              .+||+|++||++|..+..                 
T Consensus       114 ~~~~rfa~~sc~~~~~g~---~~~~~~ia~~--------------~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~  176 (527)
T 2yeq_A          114 VPQMTFAFASCQQYEHGY---YTAYKHMAKE--------------KLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEI  176 (527)
T ss_dssp             CCCEEEEEECCCCGGGCC---CHHHHHHTTS--------------CCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSC
T ss_pred             CCCEEEEEEECCCCCCCC---CHHHHHHHHC--------------CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             887599999069977786---2899999854--------------99979924886567888754445665456774100


Q ss_pred             ---HHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCH----------------
Q ss_conf             ---3232002442033119999986564434789999998665578999199807898889995----------------
Q 001736          440 ---FTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL----------------  500 (1019)
Q Consensus       440 ---e~Y~~Rfv~PYe~Al~~~~~~~~e~ia~~~pe~p~~~~~l~~~~gP~ifAIPGNHDWyDGL----------------  500 (1019)
                         ++|+.++    +..+..             |++    +.+.  ...++++|.||||..++-                
T Consensus       177 ~tl~~yr~~y----~~~~~d-------------p~l----q~~~--a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~  233 (527)
T 2yeq_A          177 ITLQDYRNRH----AQYRSD-------------ANL----KAAH--AAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVL  233 (527)
T ss_dssp             CSHHHHHHHH----HHHHTC-------------HHH----HHHH--HHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHH
T ss_pred             CCHHHHHHHH----HHHHCC-------------HHH----HHHH--HCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf             6799999999----987189-------------779----9998--6199898356212447777876334687510899


Q ss_pred             ---HHHHHHHHCCCCCCCCCCC---CCCCEEEEECCCCEEEEEEECCCCC----------------------CCCHHHHH
Q ss_conf             ---6899975113468964468---8761399987990899998168788----------------------98988999
Q 001736          501 ---NTFMRFICHKSWLGGWFMP---QKKSYFALQLPKGWWVFGLDLALHC----------------------DIDVYQFK  552 (1019)
Q Consensus       501 ---~aF~R~F~~r~~lgGW~mp---Q~~SYFAlkLp~~wWLiGLDtql~g----------------------dID~~Q~~  552 (1019)
                         .++..||-... +....+|   ..+-|++++.+....|++||+...-                      .++..|++
T Consensus       234 rr~~A~~ay~e~~P-~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~  312 (527)
T 2yeq_A          234 RRAAAYQAYYEHMP-LRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQ  312 (527)
T ss_dssp             HHHHHHHHHHHHSC-CCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHH
T ss_pred             HHHHHHHHHHHHCC-CCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             99999999998578-87656777778637899970880059998651136665555443444422468765636999999


Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC------C--CHH-HHHHHHHHHH-CCCE--EEEECCCCCCCCCEEEC
Q ss_conf             999998723099991999815798666443567------6--503-2699897650-8950--59983866897502204
Q 001736          553 FFAELVKEQVGERDSVIIMTHEPNWLLDWYFNN------V--SGK-NVKHLICDYL-KGRC--KLRIAGDMHHYMRHSYV  620 (1019)
Q Consensus       553 WLe~lL~~~v~~~d~VIL~tHeP~y~~~~~~~~------~--~g~-~l~~Lle~~L-~~RV--~LvLAGHiHhYsRy~~~  620 (1019)
                      ||++.|++  .+.+|+|++.|.|.+..+.....      +  .+. ..+..+.++| +.+|  .++|+||+|+|++....
T Consensus       313 WL~~~L~~--s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~  390 (527)
T 2yeq_A          313 WLFNNLGS--STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLH  390 (527)
T ss_dssp             HHHHHHHH--CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEE
T ss_pred             HHHHHHHC--CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCC
T ss_conf             99988752--8987699984773015446777655557520120199999999999983999879997536778673211


No 10 
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=1.00  E-value=1  Score=93.62  Aligned_cols=176  Identities=11%  Similarity=0.030  Sum_probs=92.5

Q ss_pred             CCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHCCCCCC
Q ss_conf             87389998406989998048999853743223468886556773399992665576889232320024420331199999
Q 001736          380 EDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPW  459 (1019)
Q Consensus       380 ~~lwFd~VADtGDG~dStYsVA~LlAqp~L~v~~~~~~~~lPRgdlLIlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~  459 (1019)
                      ..+.+.+++|+-.+.   .....++....           ..++|+++++||++..+...+++.. +.+.++        
T Consensus         4 ~~mri~~iSD~H~~~---~~~~~~~~~~~-----------~~~~D~vi~~GDl~~~~~~~~~~~~-~~~~l~--------   60 (228)
T 1uf3_A            4 TVRYILATSNPMGDL---EALEKFVKLAP-----------DTGADAIALIGNLMPKAAKSRDYAA-FFRILS--------   60 (228)
T ss_dssp             CCCEEEEEECCTTCH---HHHHHHHTHHH-----------HHTCSEEEEESCSSCTTCCHHHHHH-HHHHHG--------
T ss_pred             CEEEEEEEEECCCCH---HHHHHHHHHHH-----------HCCCCEEEECCCCCCCCCCHHHHHH-HHHHHH--------
T ss_conf             157999995056798---99999999876-----------4699999987887887778799999-999998--------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCCCCCCCCCEEEEECCCCEEEEEE
Q ss_conf             8656443478999999866557899919980789888999568999751-134689644688761399987990899998
Q 001736          460 YKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFIC-HKSWLGGWFMPQKKSYFALQLPKGWWVFGL  538 (1019)
Q Consensus       460 ~~~e~ia~~~pe~p~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~-~r~~lgGW~mpQ~~SYFAlkLp~~wWLiGL  538 (1019)
                                           +...| +++||||||.+.. +.+.+.+. ...+.+.+....+    .+.++.+++++|+
T Consensus        61 ---------------------~~~~p-v~~v~GNHD~~~~-~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~i~g~  113 (228)
T 1uf3_A           61 ---------------------EAHLP-TAYVPGPQDAPIW-EYLREAANVELVHPEMRNVHET----FTFWRGPYLVAGV  113 (228)
T ss_dssp             ---------------------GGCSC-EEEECCTTSCSHH-HHHHHHHHHHHHCTTEEECBTS----EEEETTTEEEEEE
T ss_pred             ---------------------HCCCC-EEEECCCCCCHHH-HHHHHHHHHHCCCCCEEECCCC----EEEECCCCEEECC
T ss_conf             ---------------------62996-8997898973667-7777654331248642874564----4760799479657


Q ss_pred             ECCCCC--CCCHH--------HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf             168788--98988--------99999999872309999199981579866644356765032699897650895059983
Q 001736          539 DLALHC--DIDVY--------QFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIA  608 (1019)
Q Consensus       539 Dtql~g--dID~~--------Q~~WLe~lL~~~v~~~d~VIL~tHeP~y~~~~~~~~~~g~~l~~Lle~~L~~RV~LvLA  608 (1019)
                      +.....  .++..        +.+|..+.+++ .. +...|+++|+|++..+...  .....+..++++   .+++++++
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~-~~~~il~~H~p~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~  186 (228)
T 1uf3_A          114 GGEIADEGEPEEHEALRYPAWVAEYRLKALWE-LK-DYPKIFLFHTMPYHKGLNE--QGSHEVAHLIKT---HNPLLVLV  186 (228)
T ss_dssp             CSEEESSSCCBSSSSCEEEHHHHHHHHGGGGG-SC-SCCEEEEESSCBCBTTTBT--TSBHHHHHHHHH---HCCSEEEE
T ss_pred             CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHH-CC-CCCEEEEECCCCCCCCCCC--CCHHHHHHHHHH---HCCCEEEE
T ss_conf             98757987637113046303567778999971-77-7786999856954678650--078999999998---49978998


Q ss_pred             CCCC
Q ss_conf             8668
Q 001736          609 GDMH  612 (1019)
Q Consensus       609 GHiH  612 (1019)
                      ||+|
T Consensus       187 GH~H  190 (228)
T 1uf3_A          187 AGKG  190 (228)
T ss_dssp             CCSS
T ss_pred             CCCC
T ss_conf             3122


Done!